Query 047540
Match_columns 388
No_of_seqs 163 out of 1598
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 12:01:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047540.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047540hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02410 UDP-glucoronosyl/UDP- 100.0 1.4E-58 3E-63 457.4 38.0 356 1-380 65-450 (451)
2 PLN02555 limonoid glucosyltran 100.0 3.6E-58 7.9E-63 456.2 37.3 368 1-382 77-471 (480)
3 PLN02173 UDP-glucosyl transfer 100.0 4.9E-57 1.1E-61 444.7 37.5 364 1-379 64-447 (449)
4 PLN02152 indole-3-acetate beta 100.0 2.8E-56 6.2E-61 440.0 37.5 363 1-378 66-454 (455)
5 PLN02207 UDP-glycosyltransfera 100.0 3.2E-56 7E-61 440.5 35.4 354 12-382 81-467 (468)
6 PLN02210 UDP-glucosyl transfer 100.0 1.1E-55 2.3E-60 438.2 37.9 360 1-380 71-455 (456)
7 PLN02992 coniferyl-alcohol glu 100.0 1.8E-55 3.9E-60 436.0 37.4 342 15-381 80-470 (481)
8 PLN00164 glucosyltransferase; 100.0 2.6E-55 5.6E-60 438.1 38.0 350 13-382 84-475 (480)
9 PLN03015 UDP-glucosyl transfer 100.0 5E-55 1.1E-59 430.7 35.8 343 13-378 81-466 (470)
10 PLN02863 UDP-glucoronosyl/UDP- 100.0 9.3E-55 2E-59 432.9 37.3 364 1-381 74-472 (477)
11 PLN02562 UDP-glycosyltransfera 100.0 1.4E-54 3.1E-59 429.7 36.5 338 13-378 75-447 (448)
12 PLN02534 UDP-glycosyltransfera 100.0 3.5E-54 7.6E-59 428.4 36.6 349 21-381 101-487 (491)
13 PLN02764 glycosyltransferase f 100.0 3.4E-54 7.4E-59 423.5 35.6 351 1-383 70-448 (453)
14 PLN03007 UDP-glucosyltransfera 100.0 3.9E-54 8.4E-59 431.3 36.6 342 26-380 110-480 (482)
15 PLN03004 UDP-glycosyltransfera 100.0 2.6E-54 5.6E-59 425.6 34.0 336 13-369 84-450 (451)
16 PLN02670 transferase, transfer 100.0 5.4E-54 1.2E-58 425.1 35.9 358 1-383 72-468 (472)
17 PLN02167 UDP-glycosyltransfera 100.0 3.4E-54 7.3E-59 430.7 34.7 349 17-382 88-474 (475)
18 PLN02554 UDP-glycosyltransfera 100.0 7.5E-54 1.6E-58 428.8 36.0 339 26-381 90-479 (481)
19 PLN02208 glycosyltransferase f 100.0 1.1E-53 2.3E-58 421.6 35.6 347 1-380 69-439 (442)
20 PLN00414 glycosyltransferase f 100.0 1.6E-53 3.4E-58 420.9 35.4 352 1-383 69-443 (446)
21 PLN02448 UDP-glycosyltransfera 100.0 3.2E-53 7E-58 422.6 36.9 354 2-380 73-457 (459)
22 PHA03392 egt ecdysteroid UDP-g 100.0 5.6E-43 1.2E-47 351.7 28.2 310 17-380 116-466 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 2.7E-44 5.8E-49 364.4 5.0 272 43-360 119-426 (500)
24 KOG1192 UDP-glucuronosyl and U 100.0 8.7E-34 1.9E-38 287.2 23.7 280 43-358 114-437 (496)
25 TIGR01426 MGT glycosyltransfer 100.0 1.1E-31 2.4E-36 264.0 27.8 291 13-359 65-375 (392)
26 cd03784 GT1_Gtf_like This fami 100.0 1.3E-29 2.9E-34 249.8 22.7 286 19-358 83-386 (401)
27 COG1819 Glycosyl transferases, 100.0 2E-27 4.3E-32 233.1 18.1 163 190-379 236-399 (406)
28 PF13528 Glyco_trans_1_3: Glyc 99.7 5.2E-17 1.1E-21 155.1 16.6 229 28-337 81-317 (318)
29 PRK12446 undecaprenyldiphospho 99.7 4.8E-16 1E-20 150.5 22.0 149 184-352 179-335 (352)
30 TIGR00661 MJ1255 conserved hyp 99.7 1.8E-15 3.9E-20 144.9 17.9 124 191-342 188-316 (321)
31 COG0707 MurG UDP-N-acetylgluco 99.7 2.4E-14 5.1E-19 137.7 22.5 137 190-342 182-326 (357)
32 PF04101 Glyco_tran_28_C: Glyc 99.5 2.9E-15 6.4E-20 129.7 -2.9 138 193-342 1-146 (167)
33 PRK00726 murG undecaprenyldiph 99.4 1.5E-10 3.3E-15 112.3 22.8 135 191-342 183-326 (357)
34 PLN02605 monogalactosyldiacylg 99.3 8E-10 1.7E-14 108.5 26.9 146 179-342 195-350 (382)
35 cd03785 GT1_MurG MurG is an N- 99.3 2.6E-10 5.7E-15 110.1 22.5 137 190-342 180-326 (350)
36 PRK13608 diacylglycerol glucos 99.3 4.7E-10 1E-14 110.5 24.0 134 190-342 201-340 (391)
37 TIGR03492 conserved hypothetic 99.3 8.2E-10 1.8E-14 108.7 24.1 135 190-342 204-366 (396)
38 PRK13609 diacylglycerol glucos 99.3 1.8E-09 4E-14 105.7 25.3 134 190-342 201-340 (380)
39 TIGR00215 lpxB lipid-A-disacch 99.2 3.5E-10 7.5E-15 111.0 17.4 175 184-374 185-382 (385)
40 TIGR01133 murG undecaprenyldip 99.1 3E-08 6.4E-13 95.7 22.2 77 258-342 243-323 (348)
41 PRK00025 lpxB lipid-A-disaccha 99.0 3.9E-08 8.5E-13 96.2 21.3 138 190-342 185-343 (380)
42 PRK14089 ipid-A-disaccharide s 98.7 3.8E-07 8.2E-12 87.7 16.0 150 191-357 167-332 (347)
43 TIGR03590 PseG pseudaminic aci 98.7 4.1E-08 8.9E-13 92.1 9.2 104 191-305 170-278 (279)
44 cd03814 GT1_like_2 This family 98.7 1.5E-05 3.4E-10 76.2 27.3 130 191-342 196-334 (364)
45 PRK05749 3-deoxy-D-manno-octul 98.6 2.1E-05 4.6E-10 78.3 25.6 81 261-352 315-401 (425)
46 COG4671 Predicted glycosyl tra 98.6 8.7E-07 1.9E-11 82.8 12.3 136 190-341 218-366 (400)
47 PLN02871 UDP-sulfoquinovose:DA 98.5 0.00034 7.4E-09 70.6 29.3 138 192-352 263-413 (465)
48 TIGR00236 wecB UDP-N-acetylglu 98.4 9.9E-06 2.1E-10 78.9 17.3 129 192-342 198-336 (365)
49 cd03786 GT1_UDP-GlcNAc_2-Epime 98.4 1.3E-05 2.7E-10 77.9 16.8 131 191-342 198-339 (363)
50 cd03817 GT1_UGDG_like This fam 98.3 0.00097 2.1E-08 63.6 26.3 130 191-342 201-345 (374)
51 cd03800 GT1_Sucrose_synthase T 98.3 0.00053 1.1E-08 66.9 24.5 81 249-342 283-370 (398)
52 cd03804 GT1_wbaZ_like This fam 98.2 0.00013 2.8E-09 70.4 19.2 127 194-341 197-327 (351)
53 cd05844 GT1_like_7 Glycosyltra 98.2 0.00046 1E-08 66.6 22.6 82 248-342 244-338 (367)
54 PF02350 Epimerase_2: UDP-N-ac 98.2 9.2E-05 2E-09 71.6 16.7 274 26-375 55-345 (346)
55 TIGR02472 sucr_P_syn_N sucrose 98.2 0.0012 2.5E-08 66.2 25.1 82 248-342 316-408 (439)
56 cd03823 GT1_ExpE7_like This fa 98.2 0.0011 2.4E-08 63.0 24.0 134 190-342 189-331 (359)
57 KOG3349 Predicted glycosyltran 98.2 8.6E-06 1.9E-10 67.0 7.8 113 191-312 3-128 (170)
58 cd03801 GT1_YqgM_like This fam 98.2 0.0019 4.2E-08 61.0 25.5 82 248-342 255-343 (374)
59 PF02684 LpxB: Lipid-A-disacch 98.1 0.00044 9.5E-09 67.2 19.1 167 190-370 183-367 (373)
60 cd03795 GT1_like_4 This family 98.1 0.00091 2E-08 64.0 21.5 142 191-352 190-345 (357)
61 PRK10307 putative glycosyl tra 98.1 0.0065 1.4E-07 60.1 27.6 161 191-379 228-406 (412)
62 cd03794 GT1_wbuB_like This fam 98.0 0.00088 1.9E-08 64.2 20.5 131 191-342 219-367 (394)
63 cd03822 GT1_ecORF704_like This 98.0 0.0052 1.1E-07 58.7 25.7 83 248-342 246-336 (366)
64 cd03798 GT1_wlbH_like This fam 98.0 0.014 3E-07 55.4 28.4 135 191-342 201-346 (377)
65 cd03808 GT1_cap1E_like This fa 98.0 0.0036 7.8E-08 59.1 24.1 135 191-342 187-331 (359)
66 cd03818 GT1_ExpC_like This fam 98.0 0.0014 3.1E-08 64.5 21.5 83 249-342 281-368 (396)
67 cd03820 GT1_amsD_like This fam 98.0 0.0037 8E-08 58.7 23.6 82 249-342 235-321 (348)
68 cd04962 GT1_like_5 This family 97.9 0.0097 2.1E-07 57.4 25.4 92 249-353 253-350 (371)
69 cd03825 GT1_wcfI_like This fam 97.9 0.0059 1.3E-07 58.6 23.6 82 248-342 243-332 (365)
70 TIGR03087 stp1 sugar transfera 97.9 0.0059 1.3E-07 60.1 23.2 79 249-342 280-364 (397)
71 cd04949 GT1_gtfA_like This fam 97.8 0.003 6.5E-08 61.3 20.7 99 248-356 260-362 (372)
72 PRK01021 lpxB lipid-A-disaccha 97.8 0.0091 2E-07 61.0 22.8 285 17-369 285-597 (608)
73 cd03816 GT1_ALG1_like This fam 97.8 0.019 4.2E-07 57.0 25.1 86 254-354 300-399 (415)
74 TIGR02468 sucrsPsyn_pln sucros 97.7 0.038 8.2E-07 60.2 28.4 93 249-352 548-650 (1050)
75 COG1519 KdtA 3-deoxy-D-manno-o 97.7 0.021 4.6E-07 55.5 23.9 78 271-358 327-405 (419)
76 TIGR03449 mycothiol_MshA UDP-N 97.7 0.014 3E-07 57.4 23.4 91 249-352 283-381 (405)
77 cd04946 GT1_AmsK_like This fam 97.7 0.001 2.2E-08 65.9 14.9 111 249-375 289-406 (407)
78 PF04007 DUF354: Protein of un 97.6 0.013 2.8E-07 56.3 20.8 137 177-338 167-308 (335)
79 cd03819 GT1_WavL_like This fam 97.6 0.03 6.6E-07 53.5 23.8 149 191-354 184-346 (355)
80 COG3980 spsG Spore coat polysa 97.6 0.00048 1E-08 62.9 10.3 146 192-358 159-308 (318)
81 TIGR02918 accessory Sec system 97.6 0.018 3.9E-07 58.6 23.0 149 192-355 319-482 (500)
82 cd03805 GT1_ALG2_like This fam 97.6 0.013 2.9E-07 57.1 20.9 91 248-352 279-377 (392)
83 cd03813 GT1_like_3 This family 97.6 0.019 4.2E-07 58.0 22.2 82 248-342 353-444 (475)
84 PF00534 Glycos_transf_1: Glyc 97.6 0.002 4.4E-08 55.2 13.1 145 190-351 13-170 (172)
85 cd03811 GT1_WabH_like This fam 97.5 0.04 8.6E-07 51.7 22.9 82 248-342 245-334 (353)
86 PRK15179 Vi polysaccharide bio 97.5 0.062 1.4E-06 56.7 25.6 81 248-340 573-659 (694)
87 TIGR03568 NeuC_NnaA UDP-N-acet 97.5 0.018 3.9E-07 56.2 20.4 130 191-339 201-338 (365)
88 PRK15484 lipopolysaccharide 1, 97.5 0.0055 1.2E-07 60.1 16.9 84 247-342 255-346 (380)
89 PRK15427 colanic acid biosynth 97.5 0.0045 9.7E-08 61.4 16.2 82 248-342 278-373 (406)
90 cd03821 GT1_Bme6_like This fam 97.5 0.0018 4E-08 61.7 12.7 82 248-342 261-347 (375)
91 cd03809 GT1_mtfB_like This fam 97.4 0.024 5.1E-07 54.1 20.2 132 191-342 194-338 (365)
92 PF13844 Glyco_transf_41: Glyc 97.4 0.003 6.4E-08 62.9 13.6 137 190-342 283-432 (468)
93 cd03807 GT1_WbnK_like This fam 97.3 0.0065 1.4E-07 57.6 14.9 79 249-342 251-334 (365)
94 COG5017 Uncharacterized conser 97.3 0.00082 1.8E-08 54.5 6.9 106 194-316 2-121 (161)
95 cd03799 GT1_amsK_like This is 97.3 0.0045 9.7E-08 59.2 13.3 136 191-342 178-329 (355)
96 TIGR03088 stp2 sugar transfera 97.3 0.0037 8E-08 60.8 12.8 81 249-342 255-340 (374)
97 PLN00142 sucrose synthase 97.3 0.067 1.5E-06 57.0 22.1 61 271-342 670-738 (815)
98 COG0763 LpxB Lipid A disacchar 97.2 0.036 7.9E-07 53.3 18.2 166 180-358 178-363 (381)
99 PRK09922 UDP-D-galactose:(gluc 97.2 0.012 2.6E-07 57.1 15.3 130 192-342 180-326 (359)
100 TIGR02470 sucr_synth sucrose s 97.2 0.21 4.5E-06 53.2 24.9 79 249-338 619-707 (784)
101 TIGR02149 glgA_Coryne glycogen 97.2 0.0097 2.1E-07 58.0 14.4 133 192-342 201-354 (388)
102 cd04951 GT1_WbdM_like This fam 97.2 0.0096 2.1E-07 57.0 14.0 78 249-341 245-327 (360)
103 PF13692 Glyco_trans_1_4: Glyc 97.0 0.0022 4.8E-08 52.6 6.7 127 193-340 3-135 (135)
104 PLN02501 digalactosyldiacylgly 97.0 0.12 2.7E-06 53.8 20.3 76 251-342 603-683 (794)
105 cd03806 GT1_ALG11_like This fa 97.0 0.32 6.9E-06 48.4 23.2 81 248-342 304-394 (419)
106 PRK09814 beta-1,6-galactofuran 97.0 0.0053 1.1E-07 59.1 10.0 110 248-376 206-331 (333)
107 PLN02949 transferase, transfer 96.9 0.15 3.3E-06 51.3 20.3 92 248-352 334-436 (463)
108 COG0381 WecB UDP-N-acetylgluco 96.9 0.15 3.2E-06 49.3 18.8 141 191-357 204-355 (383)
109 PLN02275 transferase, transfer 96.9 0.18 3.8E-06 49.2 20.1 74 250-338 287-371 (371)
110 PRK10017 colanic acid biosynth 96.8 0.65 1.4E-05 46.3 25.3 179 180-379 224-423 (426)
111 COG3914 Spy Predicted O-linked 96.6 0.021 4.6E-07 57.3 11.4 119 190-316 428-560 (620)
112 cd04955 GT1_like_6 This family 96.6 0.027 5.9E-07 54.0 11.9 126 194-342 195-332 (363)
113 PLN02846 digalactosyldiacylgly 96.6 1 2.2E-05 45.3 23.0 73 253-341 288-364 (462)
114 cd03796 GT1_PIG-A_like This fa 96.5 0.1 2.2E-06 51.3 15.8 79 248-341 249-334 (398)
115 cd04950 GT1_like_1 Glycosyltra 96.4 0.085 1.8E-06 51.5 14.5 126 192-341 205-341 (373)
116 KOG4626 O-linked N-acetylgluco 96.4 0.029 6.2E-07 56.7 10.4 120 190-316 757-887 (966)
117 cd03812 GT1_CapH_like This fam 96.3 0.072 1.6E-06 50.9 13.0 130 191-342 191-333 (358)
118 cd03792 GT1_Trehalose_phosphor 96.2 0.11 2.5E-06 50.4 14.1 79 249-342 252-339 (372)
119 cd03802 GT1_AviGT4_like This f 96.0 0.11 2.4E-06 49.2 12.6 130 192-340 171-308 (335)
120 PHA01633 putative glycosyl tra 95.9 0.12 2.6E-06 49.7 12.0 86 248-341 200-308 (335)
121 TIGR02095 glgA glycogen/starch 95.3 0.25 5.4E-06 49.9 12.5 130 191-339 290-436 (473)
122 PRK15490 Vi polysaccharide bio 95.3 0.59 1.3E-05 47.8 14.7 62 248-316 454-520 (578)
123 PRK14098 glycogen synthase; Pr 95.2 0.51 1.1E-05 48.0 14.3 133 192-338 307-449 (489)
124 PRK00654 glgA glycogen synthas 94.8 0.55 1.2E-05 47.4 13.4 132 191-339 281-427 (466)
125 cd03791 GT1_Glycogen_synthase_ 94.5 0.31 6.7E-06 49.1 10.8 135 191-340 295-442 (476)
126 PF13524 Glyco_trans_1_2: Glyc 94.4 0.34 7.3E-06 36.8 8.5 81 275-375 10-91 (92)
127 PHA01630 putative group 1 glyc 94.3 0.85 1.8E-05 43.8 12.8 111 256-378 197-328 (331)
128 PF06258 Mito_fiss_Elm1: Mitoc 92.0 3.1 6.7E-05 39.7 12.5 55 258-316 221-280 (311)
129 PLN02316 synthase/transferase 91.3 10 0.00023 41.9 16.9 117 249-379 900-1032(1036)
130 PF06722 DUF1205: Protein of u 91.1 0.17 3.7E-06 39.3 2.4 51 180-231 30-85 (97)
131 PRK10125 putative glycosyl tra 90.9 3.7 7.9E-05 40.7 12.3 115 193-334 242-365 (405)
132 TIGR02400 trehalose_OtsA alpha 90.2 3.7 8E-05 41.4 11.7 102 256-379 343-455 (456)
133 COG1817 Uncharacterized protei 90.1 17 0.00037 34.3 16.7 103 176-293 168-277 (346)
134 TIGR03713 acc_sec_asp1 accesso 89.9 1.2 2.6E-05 45.6 8.0 92 249-358 409-507 (519)
135 PLN02939 transferase, transfer 89.9 9.7 0.00021 41.6 14.9 83 249-339 837-930 (977)
136 cd01635 Glycosyltransferase_GT 88.8 1.8 4E-05 37.7 7.5 48 248-297 160-215 (229)
137 TIGR02919 accessory Sec system 87.4 13 0.00027 37.3 13.1 135 191-356 283-425 (438)
138 TIGR02193 heptsyl_trn_I lipopo 86.0 5.4 0.00012 37.8 9.5 143 182-338 171-319 (319)
139 cd03793 GT1_Glycogen_synthase_ 85.7 5.9 0.00013 40.8 9.8 79 259-341 468-553 (590)
140 PLN03063 alpha,alpha-trehalose 83.3 6.2 0.00013 42.7 9.3 101 261-382 371-479 (797)
141 COG4370 Uncharacterized protei 80.4 5.1 0.00011 37.6 6.3 83 256-351 302-387 (412)
142 cd03788 GT1_TPS Trehalose-6-Ph 80.3 8.8 0.00019 38.7 8.7 103 254-378 346-459 (460)
143 KOG1250 Threonine/serine dehyd 79.6 66 0.0014 31.6 15.9 63 271-342 248-318 (457)
144 PRK14099 glycogen synthase; Pr 79.2 32 0.00069 34.9 12.4 87 248-342 349-449 (485)
145 PF03033 Glyco_transf_28: Glyc 77.6 0.59 1.3E-05 38.3 -0.6 36 43-78 100-135 (139)
146 PF04464 Glyphos_transf: CDP-G 74.4 4.3 9.3E-05 39.4 4.5 96 250-358 253-352 (369)
147 cd03789 GT1_LPS_heptosyltransf 73.5 20 0.00044 33.1 8.6 95 191-293 121-223 (279)
148 PF05159 Capsule_synth: Capsul 72.0 17 0.00038 33.5 7.8 41 252-295 186-226 (269)
149 PRK14501 putative bifunctional 68.1 12 0.00027 40.0 6.5 110 254-381 347-463 (726)
150 TIGR02195 heptsyl_trn_II lipop 64.7 44 0.00096 31.8 9.1 96 190-293 173-276 (334)
151 PF06925 MGDG_synth: Monogalac 63.6 18 0.0004 30.8 5.7 40 26-70 77-122 (169)
152 PF01075 Glyco_transf_9: Glyco 61.5 19 0.00041 32.5 5.7 94 190-293 104-208 (247)
153 KOG2941 Beta-1,4-mannosyltrans 60.5 1.7E+02 0.0037 28.4 12.2 129 190-339 253-404 (444)
154 COG3660 Predicted nucleoside-d 58.7 1.6E+02 0.0034 27.5 11.6 75 212-296 189-276 (329)
155 PF07355 GRDB: Glycine/sarcosi 55.2 21 0.00045 34.3 4.8 37 29-70 71-117 (349)
156 PRK10422 lipopolysaccharide co 54.8 81 0.0018 30.3 9.1 97 191-293 183-287 (352)
157 PRK10916 ADP-heptose:LPS hepto 54.3 50 0.0011 31.7 7.5 96 190-293 179-286 (348)
158 PRK10964 ADP-heptose:LPS hepto 54.3 70 0.0015 30.2 8.5 131 192-339 179-321 (322)
159 TIGR02201 heptsyl_trn_III lipo 54.3 74 0.0016 30.4 8.7 97 191-293 181-285 (344)
160 PF07429 Glyco_transf_56: 4-al 52.7 2E+02 0.0043 27.9 10.8 136 191-339 183-332 (360)
161 TIGR00725 conserved hypothetic 52.4 65 0.0014 27.3 7.0 98 178-295 21-123 (159)
162 PRK02797 4-alpha-L-fucosyltran 51.5 2.2E+02 0.0047 27.2 10.8 133 192-338 145-292 (322)
163 COG0859 RfaF ADP-heptose:LPS h 50.2 59 0.0013 31.1 7.2 95 191-293 175-276 (334)
164 cd07025 Peptidase_S66 LD-Carbo 49.5 49 0.0011 30.9 6.4 77 202-297 44-122 (282)
165 TIGR01761 thiaz-red thiazoliny 49.4 1.4E+02 0.003 28.9 9.5 95 212-316 17-120 (343)
166 PRK12446 undecaprenyldiphospho 46.3 31 0.00068 33.3 4.7 98 192-295 3-122 (352)
167 PF06506 PrpR_N: Propionate ca 45.4 25 0.00055 30.2 3.5 33 264-297 31-63 (176)
168 PRK06718 precorrin-2 dehydroge 45.0 2.2E+02 0.0047 25.1 11.1 145 191-360 11-165 (202)
169 TIGR01917 gly_red_sel_B glycin 44.7 37 0.00081 33.5 4.8 37 29-70 67-113 (431)
170 TIGR01918 various_sel_PB selen 44.7 38 0.00082 33.5 4.8 43 271-315 348-392 (431)
171 PF05014 Nuc_deoxyrib_tr: Nucl 44.1 82 0.0018 24.7 6.1 94 194-299 1-101 (113)
172 PF10093 DUF2331: Uncharacteri 43.2 35 0.00076 33.3 4.4 88 203-294 191-289 (374)
173 PLN02929 NADH kinase 43.1 45 0.00098 31.6 5.0 66 265-341 64-138 (301)
174 PRK03359 putative electron tra 42.9 48 0.001 30.6 5.1 40 28-72 102-147 (256)
175 cd07062 Peptidase_S66_mccF_lik 42.7 65 0.0014 30.5 6.2 77 202-297 48-126 (308)
176 PRK02155 ppnK NAD(+)/NADH kina 40.9 73 0.0016 30.0 6.1 54 265-341 63-120 (291)
177 PF02826 2-Hacid_dh_C: D-isome 40.3 78 0.0017 27.2 5.8 105 191-336 37-143 (178)
178 PRK12342 hypothetical protein; 40.3 57 0.0012 30.1 5.2 38 29-71 100-143 (254)
179 COG0801 FolK 7,8-dihydro-6-hyd 39.9 56 0.0012 27.8 4.6 35 192-226 2-36 (160)
180 PF06506 PrpR_N: Propionate ca 39.5 38 0.00083 29.1 3.7 44 26-74 110-153 (176)
181 cd07039 TPP_PYR_POX Pyrimidine 39.5 1.4E+02 0.003 25.3 7.1 27 268-294 64-96 (164)
182 PLN02470 acetolactate synthase 39.4 74 0.0016 33.1 6.5 90 197-294 2-109 (585)
183 PF12000 Glyco_trans_4_3: Gkyc 38.6 1E+02 0.0022 26.6 6.1 43 28-70 51-94 (171)
184 PRK04539 ppnK inorganic polyph 37.4 1E+02 0.0023 29.1 6.5 55 264-341 67-125 (296)
185 COG0438 RfaG Glycosyltransfera 36.9 3.1E+02 0.0068 24.6 16.8 81 249-342 257-344 (381)
186 COG1422 Predicted membrane pro 36.4 82 0.0018 27.8 5.1 72 279-365 24-96 (201)
187 cd01141 TroA_d Periplasmic bin 36.3 57 0.0012 27.9 4.4 39 27-71 59-99 (186)
188 PRK14077 pnk inorganic polypho 36.2 84 0.0018 29.6 5.7 55 264-341 63-121 (287)
189 COG3195 Uncharacterized protei 35.9 1.7E+02 0.0038 24.9 6.8 95 257-358 63-164 (176)
190 COG1698 Uncharacterized protei 35.7 1.9E+02 0.0041 22.0 6.2 46 329-377 17-63 (93)
191 KOG0853 Glycosyltransferase [C 35.5 52 0.0011 33.4 4.3 54 279-342 381-435 (495)
192 cd01840 SGNH_hydrolase_yrhL_li 34.8 1.2E+02 0.0027 24.9 6.0 38 190-228 50-87 (150)
193 PRK03372 ppnK inorganic polyph 34.3 1E+02 0.0022 29.3 6.0 54 265-341 72-129 (306)
194 TIGR02398 gluc_glyc_Psyn gluco 34.1 5.2E+02 0.011 26.3 16.2 108 253-381 366-483 (487)
195 cd01018 ZntC Metal binding pro 34.0 1.2E+02 0.0026 27.9 6.4 46 27-74 203-250 (266)
196 PF05693 Glycogen_syn: Glycoge 33.9 71 0.0015 33.3 5.0 38 45-82 143-183 (633)
197 PLN03064 alpha,alpha-trehalose 33.7 7.1E+02 0.015 27.8 13.7 100 261-382 455-563 (934)
198 PRK01911 ppnK inorganic polyph 33.4 1E+02 0.0022 29.1 5.8 55 264-341 63-121 (292)
199 TIGR01470 cysG_Nterm siroheme 33.3 3.4E+02 0.0074 23.9 9.5 148 191-360 10-165 (205)
200 COG1052 LdhA Lactate dehydroge 33.2 1.9E+02 0.0041 27.7 7.7 104 191-336 147-252 (324)
201 KOG0069 Glyoxylate/hydroxypyru 33.1 2.7E+02 0.0059 26.8 8.6 106 190-336 162-269 (336)
202 PF05225 HTH_psq: helix-turn-h 33.1 71 0.0015 20.7 3.3 26 326-354 1-27 (45)
203 COG0299 PurN Folate-dependent 33.0 80 0.0017 27.8 4.6 43 28-70 12-56 (200)
204 COG2099 CobK Precorrin-6x redu 31.4 98 0.0021 28.5 5.0 39 26-70 54-99 (257)
205 COG0052 RpsB Ribosomal protein 31.2 64 0.0014 29.5 3.8 34 42-75 155-190 (252)
206 cd06559 Endonuclease_V Endonuc 31.2 47 0.001 29.7 2.9 38 30-70 83-127 (208)
207 PRK06487 glycerate dehydrogena 31.0 1.9E+02 0.0041 27.5 7.3 101 190-335 148-248 (317)
208 PF04493 Endonuclease_5: Endon 30.4 90 0.0019 27.8 4.6 38 30-70 79-123 (206)
209 PRK13057 putative lipid kinase 30.0 1.3E+02 0.0029 27.9 6.0 29 265-295 50-82 (287)
210 PF02776 TPP_enzyme_N: Thiamin 29.8 1.4E+02 0.003 25.4 5.6 29 267-295 64-98 (172)
211 PRK08410 2-hydroxyacid dehydro 29.6 2.1E+02 0.0046 27.1 7.4 102 190-336 145-248 (311)
212 PRK06932 glycerate dehydrogena 29.5 2.1E+02 0.0046 27.1 7.4 101 191-335 148-248 (314)
213 PRK01231 ppnK inorganic polyph 29.3 1.3E+02 0.0028 28.4 5.8 54 265-341 62-119 (295)
214 PRK08155 acetolactate synthase 28.8 78 0.0017 32.8 4.6 28 267-294 76-109 (564)
215 TIGR00730 conserved hypothetic 28.2 1.7E+02 0.0037 25.3 5.9 101 178-294 22-133 (178)
216 PRK02649 ppnK inorganic polyph 28.1 1.3E+02 0.0027 28.6 5.5 54 265-341 68-125 (305)
217 cd03466 Nitrogenase_NifN_2 Nit 27.2 96 0.0021 30.9 4.7 25 43-70 372-396 (429)
218 CHL00076 chlB photochlorophyll 27.1 95 0.0021 31.8 4.8 26 43-71 374-399 (513)
219 PRK04885 ppnK inorganic polyph 26.8 58 0.0013 30.2 2.9 27 266-294 36-68 (265)
220 PRK04761 ppnK inorganic polyph 26.7 60 0.0013 29.8 2.9 28 266-295 26-57 (246)
221 KOG0081 GTPase Rab27, small G 26.7 1.6E+02 0.0035 25.1 5.1 42 30-71 109-162 (219)
222 PLN02935 Bifunctional NADH kin 26.5 1.5E+02 0.0032 30.3 5.7 54 265-341 262-319 (508)
223 PRK11914 diacylglycerol kinase 26.4 3.4E+02 0.0074 25.4 8.2 26 270-295 67-96 (306)
224 COG2159 Predicted metal-depend 26.3 3.5E+02 0.0075 25.4 8.1 90 178-283 116-210 (293)
225 PRK05579 bifunctional phosphop 26.3 4.7E+02 0.01 25.8 9.3 140 191-339 7-182 (399)
226 TIGR03609 S_layer_CsaB polysac 26.2 3.2E+02 0.007 25.3 8.0 99 191-295 172-277 (298)
227 cd01981 Pchlide_reductase_B Pc 26.1 1.1E+02 0.0023 30.5 4.9 26 43-71 370-395 (430)
228 COG0297 GlgA Glycogen synthase 25.8 3.4E+02 0.0074 27.7 8.3 166 192-380 293-477 (487)
229 cd01976 Nitrogenase_MoFe_alpha 25.6 89 0.0019 31.1 4.2 36 31-71 359-394 (421)
230 COG0503 Apt Adenine/guanine ph 25.6 1.6E+02 0.0034 25.5 5.2 28 43-70 53-82 (179)
231 cd07035 TPP_PYR_POX_like Pyrim 25.6 2.1E+02 0.0045 23.5 5.9 28 268-295 60-93 (155)
232 PF06180 CbiK: Cobalt chelatas 25.3 71 0.0015 29.6 3.1 39 192-230 2-43 (262)
233 PRK03501 ppnK inorganic polyph 25.1 1.8E+02 0.004 26.9 5.9 54 266-341 40-98 (264)
234 PF04909 Amidohydro_2: Amidohy 24.9 1.8E+02 0.0039 26.1 5.9 55 262-317 159-229 (273)
235 cd07037 TPP_PYR_MenD Pyrimidin 24.7 71 0.0015 27.2 2.8 27 268-294 61-93 (162)
236 cd01965 Nitrogenase_MoFe_beta_ 24.7 1.2E+02 0.0027 30.0 5.0 37 29-70 359-395 (428)
237 PF01297 TroA: Periplasmic sol 24.6 98 0.0021 28.2 4.0 45 27-73 185-231 (256)
238 TIGR00147 lipid kinase, YegS/R 24.5 2E+02 0.0044 26.6 6.3 26 270-295 60-91 (293)
239 PRK01185 ppnK inorganic polyph 24.5 1.6E+02 0.0034 27.5 5.3 54 265-341 52-106 (271)
240 COG1737 RpiR Transcriptional r 24.4 2.9E+02 0.0064 25.6 7.2 92 179-301 122-218 (281)
241 PF00282 Pyridoxal_deC: Pyrido 24.3 1.6E+02 0.0035 28.7 5.7 71 268-340 104-191 (373)
242 PRK14092 2-amino-4-hydroxy-6-h 23.9 1.7E+02 0.0037 25.0 5.0 31 190-220 6-36 (163)
243 PF01497 Peripla_BP_2: Peripla 23.8 1.1E+02 0.0023 27.1 4.0 42 27-74 50-93 (238)
244 cd01017 AdcA Metal binding pro 23.7 1.7E+02 0.0037 27.1 5.5 46 26-73 205-252 (282)
245 TIGR01278 DPOR_BchB light-inde 23.7 1.2E+02 0.0027 31.0 4.9 26 43-71 364-389 (511)
246 PRK06276 acetolactate synthase 23.6 6.4E+02 0.014 26.2 10.2 28 267-294 63-96 (586)
247 cd01147 HemV-2 Metal binding p 23.5 1.2E+02 0.0025 27.4 4.3 39 28-72 65-106 (262)
248 cd07038 TPP_PYR_PDC_IPDC_like 23.4 2.5E+02 0.0054 23.6 6.0 27 268-294 60-92 (162)
249 cd01143 YvrC Periplasmic bindi 23.3 1.5E+02 0.0032 25.3 4.7 39 28-72 51-90 (195)
250 PF00862 Sucrose_synth: Sucros 23.0 1.7E+02 0.0037 29.9 5.4 81 42-130 400-482 (550)
251 PRK02910 light-independent pro 22.9 1.3E+02 0.0029 30.8 4.9 36 31-71 352-387 (519)
252 TIGR00347 bioD dethiobiotin sy 22.5 2E+02 0.0044 23.9 5.3 40 29-71 88-136 (166)
253 PRK07574 formate dehydrogenase 22.5 5.5E+02 0.012 25.2 8.9 68 191-279 193-260 (385)
254 PRK09071 hypothetical protein; 22.4 3.3E+02 0.0072 26.1 7.2 68 302-382 4-71 (323)
255 PF04558 tRNA_synt_1c_R1: Glut 22.4 80 0.0017 27.0 2.7 28 305-341 106-133 (164)
256 cd01980 Chlide_reductase_Y Chl 22.3 1.4E+02 0.003 29.7 4.8 26 43-71 350-375 (416)
257 cd03412 CbiK_N Anaerobic cobal 22.2 1.3E+02 0.0029 24.2 3.9 37 192-228 2-40 (127)
258 PRK06270 homoserine dehydrogen 22.1 6.9E+02 0.015 23.9 9.5 58 258-316 80-149 (341)
259 PRK13932 stationary phase surv 22.1 1.2E+02 0.0025 28.1 3.9 25 271-295 108-133 (257)
260 PRK03378 ppnK inorganic polyph 22.0 1.7E+02 0.0038 27.5 5.2 54 265-341 63-120 (292)
261 PRK14075 pnk inorganic polypho 22.0 1.2E+02 0.0026 27.9 4.0 53 266-341 42-95 (256)
262 PRK07449 2-succinyl-5-enolpyru 22.0 2.2E+02 0.0048 29.4 6.4 27 268-294 73-105 (568)
263 PRK09219 xanthine phosphoribos 21.8 1.4E+02 0.003 26.1 4.2 29 43-71 50-80 (189)
264 TIGR00639 PurN phosphoribosylg 21.8 2.1E+02 0.0046 25.0 5.4 43 28-70 12-56 (190)
265 TIGR02015 BchY chlorophyllide 21.8 1.3E+02 0.0027 30.1 4.4 34 33-71 347-380 (422)
266 PRK14076 pnk inorganic polypho 21.8 1.6E+02 0.0035 30.6 5.3 53 268-341 349-405 (569)
267 PRK12311 rpsB 30S ribosomal pr 21.7 1.1E+02 0.0023 29.5 3.6 34 42-75 151-186 (326)
268 PRK11380 hypothetical protein; 21.6 2.2E+02 0.0049 27.4 5.6 74 259-348 117-202 (353)
269 PF02571 CbiJ: Precorrin-6x re 21.5 1.6E+02 0.0035 27.0 4.7 38 28-71 56-100 (249)
270 PF02016 Peptidase_S66: LD-car 21.2 1.3E+02 0.0027 28.2 4.0 75 203-296 45-121 (284)
271 PRK10353 3-methyl-adenine DNA 21.2 2.7E+02 0.0058 24.4 5.7 81 292-375 22-120 (187)
272 PRK03708 ppnK inorganic polyph 20.9 81 0.0018 29.5 2.7 26 270-295 60-88 (277)
273 PLN02859 glutamine-tRNA ligase 20.9 1.8E+02 0.0039 31.5 5.4 68 301-377 104-177 (788)
274 PRK08057 cobalt-precorrin-6x r 20.8 1.9E+02 0.0041 26.5 5.0 39 28-72 55-100 (248)
275 PF08030 NAD_binding_6: Ferric 20.6 60 0.0013 26.8 1.6 39 192-230 3-46 (156)
276 COG2521 Predicted archaeal met 20.3 91 0.002 28.5 2.6 23 27-51 191-213 (287)
277 PF09547 Spore_IV_A: Stage IV 20.2 3.2E+02 0.007 27.4 6.6 73 262-338 141-233 (492)
278 TIGR01285 nifN nitrogenase mol 20.2 1.6E+02 0.0034 29.5 4.7 25 43-70 373-397 (432)
279 TIGR02329 propionate_PrpR prop 20.1 1.7E+02 0.0037 30.1 5.0 43 26-73 130-172 (526)
280 TIGR03837 efp_adjacent_2 conse 20.1 2.1E+02 0.0045 27.9 5.2 89 202-293 188-286 (371)
281 COG1515 Nfi Deoxyinosine 3'end 20.0 72 0.0016 28.4 1.9 43 28-70 80-129 (212)
No 1
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.4e-58 Score=457.42 Aligned_cols=356 Identities=34% Similarity=0.610 Sum_probs=285.5
Q ss_pred CCCCCCCCCccccHHHHHHHHHhccccHHHHHHHHHhhc-CCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHH
Q 047540 1 GLPDPSNENANQDANSLFESITNNVMLQPFLDLLQKLKS-SSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFK 79 (388)
Q Consensus 1 glp~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ll~~l~~-~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~ 79 (388)
|||++ ..+ +.+...++..+... +.+.++++++.+.. .+.+++|||+|.++.|+..+|+++|||++.|++++++.++
T Consensus 65 glp~~-~~~-~~~~~~~~~~~~~~-~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~ 141 (451)
T PLN02410 65 SLPES-DFK-NLGPIEFLHKLNKE-CQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFV 141 (451)
T ss_pred CCCcc-ccc-ccCHHHHHHHHHHH-hHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHH
Confidence 56664 122 23455778877777 88999999998753 3357899999999999999999999999999999988876
Q ss_pred Hhhhhccc---------cc-----CCCCCc---cc--c-------cchhHHHHHHHHHHhhccCCeEEEcChhhhhHHHH
Q 047540 80 GCMQLRTL---------EE-----NTTLTS---LI--D-------LNSYATRVAIEAAKNAAKASAVVIHTFDALERQVL 133 (388)
Q Consensus 80 ~~~~~~~~---------~~-----~~~~pr---~~--~-------~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l 133 (388)
.+.+++.+ .. ...+|. +. + ........+... ..+.+++++++|||++||+..+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~-~~~~~~~~vlvNTf~eLE~~~~ 220 (451)
T PLN02410 142 CRSVFDKLYANNVLAPLKEPKGQQNELVPEFHPLRCKDFPVSHWASLESIMELYRNT-VDKRTASSVIINTASCLESSSL 220 (451)
T ss_pred HHHHHHHHHhccCCCCccccccCccccCCCCCCCChHHCcchhcCCcHHHHHHHHHH-hhcccCCEEEEeChHHhhHHHH
Confidence 55432111 00 001221 11 1 111112222222 2346789999999999999999
Q ss_pred HHHHhhC-CCceecCCcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHH
Q 047540 134 DALSAMF-PNLFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEV 212 (388)
Q Consensus 134 ~~~~~~~-p~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~ 212 (388)
++.+... +++++|||++.... .+ .+.++.+.+|.+|||.++ .++||||||||...++.+++.++
T Consensus 221 ~~l~~~~~~~v~~vGpl~~~~~------------~~--~~~~~~~~~~~~wLd~~~-~~sVvyvsfGS~~~~~~~q~~el 285 (451)
T PLN02410 221 SRLQQQLQIPVYPIGPLHLVAS------------AP--TSLLEENKSCIEWLNKQK-KNSVIFVSLGSLALMEINEVMET 285 (451)
T ss_pred HHHHhccCCCEEEecccccccC------------CC--ccccccchHHHHHHHhCC-CCcEEEEEccccccCCHHHHHHH
Confidence 9998755 58999999975321 01 122333457999999998 88999999999999999999999
Q ss_pred HHHHhcCCCCEEEEEcCCCCC--CCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcE
Q 047540 213 AMGLVNSNHPFLWIIRPDLVT--GETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPM 290 (388)
Q Consensus 213 ~~al~~~~~~~iw~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~ 290 (388)
+.+|+.++.+|||+++.+... +....+|++|.+|+++|+++++|+||.+||+|+++++|||||||||++||+++||||
T Consensus 286 a~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~ 365 (451)
T PLN02410 286 ASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPM 365 (451)
T ss_pred HHHHHhcCCCeEEEEccCcccccchhhcCChhHHHhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCE
Confidence 999999999999999843211 111247999999999999999999999999999999999999999999999999999
Q ss_pred EecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHH
Q 047540 291 ICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATN 370 (388)
Q Consensus 291 i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~ 370 (388)
|++|+++||+.||+++++.+|+|+.+ +..++.++|+++|+++|.+++|++||+||+++++.+++++.+||||..+
T Consensus 366 l~~P~~~DQ~~na~~~~~~~~~G~~~-----~~~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~ 440 (451)
T PLN02410 366 ICKPFSSDQKVNARYLECVWKIGIQV-----EGDLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNS 440 (451)
T ss_pred EeccccccCHHHHHHHHHHhCeeEEe-----CCcccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHH
Confidence 99999999999999997778999999 6679999999999999998878899999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 047540 371 LEKLEQPVIK 380 (388)
Q Consensus 371 ~~~~v~~l~~ 380 (388)
+++||+.+..
T Consensus 441 l~~fv~~~~~ 450 (451)
T PLN02410 441 LEEFVHFMRT 450 (451)
T ss_pred HHHHHHHHHh
Confidence 9999998753
No 2
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=3.6e-58 Score=456.23 Aligned_cols=368 Identities=33% Similarity=0.622 Sum_probs=293.7
Q ss_pred CCCCCCCCCccccHHHHHHHHHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHH
Q 047540 1 GLPDPSNENANQDANSLFESITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKG 80 (388)
Q Consensus 1 glp~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~ 80 (388)
|||++ .+...++..++..+... +.+.++++++.+..++++++|||+|.++.|+..+|+++|||.++|++++++.++.
T Consensus 77 glp~~--~~~~~~~~~~~~~~~~~-~~~~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~ 153 (480)
T PLN02555 77 GWAED--DPRRQDLDLYLPQLELV-GKREIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSA 153 (480)
T ss_pred CCCCC--cccccCHHHHHHHHHHh-hhHHHHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHH
Confidence 56666 33345666788888777 8999999999875433456999999999999999999999999999999988877
Q ss_pred hhhhccc----cc---C--C-CCC---ccc--------c---cchhHHHHHHHHHHhhccCCeEEEcChhhhhHHHHHHH
Q 047540 81 CMQLRTL----EE---N--T-TLT---SLI--------D---LNSYATRVAIEAAKNAAKASAVVIHTFDALERQVLDAL 136 (388)
Q Consensus 81 ~~~~~~~----~~---~--~-~~p---r~~--------~---~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~~~ 136 (388)
+.+++.. .. . . .+| .+. . ......+.+.+..+...+++++++|||++||+..++.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l 233 (480)
T PLN02555 154 YYHYYHGLVPFPTETEPEIDVQLPCMPLLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYM 233 (480)
T ss_pred HHHHhhcCCCcccccCCCceeecCCCCCcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHH
Confidence 6554221 00 0 0 012 111 1 12223344445556667889999999999999999988
Q ss_pred HhhCCCceecCCcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHH
Q 047540 137 SAMFPNLFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGL 216 (388)
Q Consensus 137 ~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al 216 (388)
+...| ++.|||+........ . ... ...++.+++|.+||+.++ ++++|||||||+..++.+++.+++.+|
T Consensus 234 ~~~~~-v~~iGPl~~~~~~~~--~-----~~~--~~~~~~~~~~~~wLd~~~-~~sVvyvsfGS~~~~~~~q~~ela~~l 302 (480)
T PLN02555 234 SKLCP-IKPVGPLFKMAKTPN--S-----DVK--GDISKPADDCIEWLDSKP-PSSVVYISFGTVVYLKQEQIDEIAYGV 302 (480)
T ss_pred hhCCC-EEEeCcccCcccccc--c-----ccc--ccccccchhHHHHHhCCC-CCceeEEEeccccCCCHHHHHHHHHHH
Confidence 77666 999999974321100 0 001 222344578999999998 789999999999999999999999999
Q ss_pred hcCCCCEEEEEcCCCCC--CCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecC
Q 047540 217 VNSNHPFLWIIRPDLVT--GETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWP 294 (388)
Q Consensus 217 ~~~~~~~iw~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P 294 (388)
+..+++|||+++..... .....+|+++.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|
T Consensus 303 ~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P 382 (480)
T PLN02555 303 LNSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFP 382 (480)
T ss_pred HhcCCeEEEEEecCcccccchhhcCChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCC
Confidence 99999999999743211 1123478889888899999999999999999999999999999999999999999999999
Q ss_pred CccchhHhHHHHhhhhceeEEeeecCC-CCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHH
Q 047540 295 FLGDQATNCRYTCNEWGVGMDITNSGD-DNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEK 373 (388)
Q Consensus 295 ~~~DQ~~na~~v~~~~G~G~~l~~~~~-~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~ 373 (388)
+++||+.||+++++.+|+|+.+...+. ...++.++|+++|+++|.+++|+++|+||++|++++++|+.+||||..++++
T Consensus 383 ~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~ 462 (480)
T PLN02555 383 QWGDQVTDAVYLVDVFKTGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQE 462 (480)
T ss_pred CccccHHHHHHHHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 999999999999888899999932111 2468999999999999988888999999999999999999999999999999
Q ss_pred HHHHHHHhh
Q 047540 374 LEQPVIKLI 382 (388)
Q Consensus 374 ~v~~l~~~~ 382 (388)
||+.+....
T Consensus 463 ~v~~i~~~~ 471 (480)
T PLN02555 463 FVDKLVRKS 471 (480)
T ss_pred HHHHHHhcc
Confidence 999998763
No 3
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=4.9e-57 Score=444.70 Aligned_cols=364 Identities=29% Similarity=0.531 Sum_probs=283.2
Q ss_pred CCCCCCCCCccccHHHHHHHHHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHH
Q 047540 1 GLPDPSNENANQDANSLFESITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKG 80 (388)
Q Consensus 1 glp~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~ 80 (388)
|||++ ..+.++++..++..+.+. +.+.++++++.+...+.+++|||+|.+++|+..+|+++|||++.|++++++....
T Consensus 64 glp~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~ 141 (449)
T PLN02173 64 GYDQG-GFSSAGSVPEYLQNFKTF-GSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYI 141 (449)
T ss_pred CCCCc-ccccccCHHHHHHHHHHh-hhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHH
Confidence 67774 123445677888888878 8999999999875332345999999999999999999999999999988777655
Q ss_pred hhhhcc------cccCCCC-------Cc-cc--ccchhHHHHHHHHHHhhccCCeEEEcChhhhhHHHHHHHHhhCCCce
Q 047540 81 CMQLRT------LEENTTL-------TS-LI--DLNSYATRVAIEAAKNAAKASAVVIHTFDALERQVLDALSAMFPNLF 144 (388)
Q Consensus 81 ~~~~~~------~~~~~~~-------pr-~~--~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~~~~~~~p~~~ 144 (388)
+++... ..-+++. |. +. .......+.+.+..+...+++++++|||++||+..++..+.. ++++
T Consensus 142 ~~~~~~~~~~~~~~~pg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~-~~v~ 220 (449)
T PLN02173 142 NYLSYINNGSLTLPIKDLPLLELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKV-CPVL 220 (449)
T ss_pred HHhHHhccCCccCCCCCCCCCChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhc-CCee
Confidence 432100 0001111 11 11 111223444445556677899999999999999999998765 4699
Q ss_pred ecCCcccchh-hccccCCCCCCCCCCCCCCc--ccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCC
Q 047540 145 TIGPLQLLLN-QINEQGGNSLSSTGYKYNLW--KEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNH 221 (388)
Q Consensus 145 ~vGpl~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~ 221 (388)
.|||++.... ... .. . ....+.+.+ +.+++|.+||+.++ ++++|||||||+...+.+++.+++.+| .+.
T Consensus 221 ~VGPl~~~~~~~~~-~~--~--~~~~~~~~~~~~~~~~c~~WLd~~~-~~svvyvsfGS~~~~~~~~~~ela~gL--s~~ 292 (449)
T PLN02173 221 TIGPTVPSMYLDQQ-IK--S--DNDYDLNLFDLKEAALCTDWLDKRP-QGSVVYIAFGSMAKLSSEQMEEIASAI--SNF 292 (449)
T ss_pred EEcccCchhhcccc-cc--c--cccccccccccccchHHHHHHhcCC-CCceEEEEecccccCCHHHHHHHHHHh--cCC
Confidence 9999974210 000 00 0 000001222 23456999999998 899999999999999999999999999 788
Q ss_pred CEEEEEcCCCCCCCCCCCchhHHHhh-hcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchh
Q 047540 222 PFLWIIRPDLVTGETADMPSEFEVKA-KETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQA 300 (388)
Q Consensus 222 ~~iw~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~ 300 (388)
+|+|+++.+. ...+|+++.++. ++|+++.+|+||.+||+|+++++|||||||||++|++.+|||||++|+++||+
T Consensus 293 ~flWvvr~~~----~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~ 368 (449)
T PLN02173 293 SYLWVVRASE----ESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQP 368 (449)
T ss_pred CEEEEEeccc----hhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcch
Confidence 8999998532 223788888887 57889999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q 047540 301 TNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPVI 379 (388)
Q Consensus 301 ~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~ 379 (388)
.||+++++.+|+|+.+...+.+..++.++|+++|+++|.+++|+++|+||+++++++++|+++||||.+++++|++++.
T Consensus 369 ~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 369 MNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred HHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 9999998888999999321112347999999999999998888899999999999999999999999999999999875
No 4
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=2.8e-56 Score=439.96 Aligned_cols=363 Identities=29% Similarity=0.530 Sum_probs=281.2
Q ss_pred CCCCCCCC-CccccHHHHHHHHHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHH
Q 047540 1 GLPDPSNE-NANQDANSLFESITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFK 79 (388)
Q Consensus 1 glp~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~ 79 (388)
|+|++ . ..+.++..++..+... +.+.++++++.+...+.+++|||+|.+++|+..+|+++|||++.|++++++.++
T Consensus 66 glp~g--~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~ 142 (455)
T PLN02152 66 GFDDG--VISNTDDVQNRLVNFERN-GDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFD 142 (455)
T ss_pred CCCCc--cccccccHHHHHHHHHHh-ccHHHHHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHH
Confidence 57766 3 2245677777777778 899999999987543346799999999999999999999999999999998888
Q ss_pred Hhhhhccccc-----CCCC-------Cc-cc--ccchhHHHHHHHHHHhhcc--CCeEEEcChhhhhHHHHHHHHhhCCC
Q 047540 80 GCMQLRTLEE-----NTTL-------TS-LI--DLNSYATRVAIEAAKNAAK--ASAVVIHTFDALERQVLDALSAMFPN 142 (388)
Q Consensus 80 ~~~~~~~~~~-----~~~~-------pr-~~--~~~~~~~~~~~~~~~~~~~--~~~~l~~s~~~le~~~l~~~~~~~p~ 142 (388)
.+++++.... ++.. |. +. .......+.+.+..+.... ++++++|||++||+..++..+.. +
T Consensus 143 ~~~~~~~~~~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~--~ 220 (455)
T PLN02152 143 IYYNYSTGNNSVFEFPNLPSLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPNI--E 220 (455)
T ss_pred HHHHhhccCCCeeecCCCCCCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhcC--C
Confidence 7655432111 1111 11 10 1112223344444443332 46999999999999999988652 6
Q ss_pred ceecCCcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCC
Q 047540 143 LFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHP 222 (388)
Q Consensus 143 ~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~ 222 (388)
++.|||+........ . ......+.++.+.+|.+|||.++ +++||||||||+..++.+++++++.+|+.++.+
T Consensus 221 v~~VGPL~~~~~~~~--~-----~~~~~~~~~~~~~~~~~wLd~~~-~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~ 292 (455)
T PLN02152 221 MVAVGPLLPAEIFTG--S-----ESGKDLSVRDQSSSYTLWLDSKT-ESSVIYVSFGTMVELSKKQIEELARALIEGKRP 292 (455)
T ss_pred EEEEcccCccccccc--c-----ccCccccccccchHHHHHhhCCC-CCceEEEEecccccCCHHHHHHHHHHHHHcCCC
Confidence 999999974310000 0 00000011233468999999998 889999999999999999999999999999999
Q ss_pred EEEEEcCCCCC-----CC---CCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecC
Q 047540 223 FLWIIRPDLVT-----GE---TADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWP 294 (388)
Q Consensus 223 ~iw~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P 294 (388)
|||+++.+... .. ...+|+++.++.++|+++.+|+||.+||+|+++++|||||||||++|++++|||||++|
T Consensus 293 flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P 372 (455)
T PLN02152 293 FLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFP 372 (455)
T ss_pred eEEEEecCcccccccccccccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEecc
Confidence 99999853210 00 11246789889999999999999999999999999999999999999999999999999
Q ss_pred CccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHH
Q 047540 295 FLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKL 374 (388)
Q Consensus 295 ~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~ 374 (388)
+++||+.||+++++.+|+|+.+. .+++..++.++|+++|+++|+++ +++||+||+++++++++++.+||||.+++++|
T Consensus 373 ~~~DQ~~na~~~~~~~~~G~~~~-~~~~~~~~~e~l~~av~~vm~~~-~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~l 450 (455)
T PLN02152 373 MWSDQPANAKLLEEIWKTGVRVR-ENSEGLVERGEIRRCLEAVMEEK-SVELRESAEKWKRLAIEAGGEGGSSDKNVEAF 450 (455)
T ss_pred ccccchHHHHHHHHHhCceEEee-cCcCCcCcHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHH
Confidence 99999999999977778888872 22223579999999999999754 56799999999999999999999999999999
Q ss_pred HHHH
Q 047540 375 EQPV 378 (388)
Q Consensus 375 v~~l 378 (388)
|+.+
T Consensus 451 i~~i 454 (455)
T PLN02152 451 VKTL 454 (455)
T ss_pred HHHh
Confidence 9875
No 5
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=3.2e-56 Score=440.52 Aligned_cols=354 Identities=25% Similarity=0.426 Sum_probs=273.3
Q ss_pred ccHHHHHHHHHhccccH----HHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhhccc
Q 047540 12 QDANSLFESITNNVMLQ----PFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTL 87 (388)
Q Consensus 12 ~d~~~~~~~~~~~~~~~----~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 87 (388)
.+...++-.+... +.+ .+.++++.+..++++++|||+|.+++|+..+|+++|||++.|++++++.++.+.+.+..
T Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~ 159 (468)
T PLN02207 81 QSVEAYVYDVIEK-NIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADR 159 (468)
T ss_pred cCHHHHHHHHHHh-cchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhc
Confidence 3455444444445 544 45555554322223459999999999999999999999999999998877765444211
Q ss_pred cc--------C--C--CCCc----cc--------ccchhHHHHHHHHHHhhccCCeEEEcChhhhhHHHHHHHH--hhCC
Q 047540 88 EE--------N--T--TLTS----LI--------DLNSYATRVAIEAAKNAAKASAVVIHTFDALERQVLDALS--AMFP 141 (388)
Q Consensus 88 ~~--------~--~--~~pr----~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~~~~--~~~p 141 (388)
.. . . .+|. +. ..... ...+.+....+.+++++++|||++||++.++..+ +..|
T Consensus 160 ~~~~~~~~~~~~~~~~~vPgl~~~l~~~dlp~~~~~~~~-~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p 238 (468)
T PLN02207 160 HSKDTSVFVRNSEEMLSIPGFVNPVPANVLPSALFVEDG-YDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDEQNYP 238 (468)
T ss_pred cccccccCcCCCCCeEECCCCCCCCChHHCcchhcCCcc-HHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhccCCC
Confidence 00 0 0 0121 11 01111 2334445556678999999999999999998884 3568
Q ss_pred CceecCCcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCC
Q 047540 142 NLFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNH 221 (388)
Q Consensus 142 ~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~ 221 (388)
+++.|||++..... +.+ ......+++|.+|||.++ ++++|||||||...++.+++++++.+|+.+++
T Consensus 239 ~v~~VGPl~~~~~~----------~~~--~~~~~~~~~~~~WLd~~~-~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~ 305 (468)
T PLN02207 239 SVYAVGPIFDLKAQ----------PHP--EQDLARRDELMKWLDDQP-EASVVFLCFGSMGRLRGPLVKEIAHGLELCQY 305 (468)
T ss_pred cEEEecCCcccccC----------CCC--ccccchhhHHHHHHhcCC-CCcEEEEEeccCcCCCHHHHHHHHHHHHHCCC
Confidence 89999999753210 111 100112467999999998 88999999999999999999999999999999
Q ss_pred CEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhH
Q 047540 222 PFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQAT 301 (388)
Q Consensus 222 ~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~ 301 (388)
+|||+++.... .....+|++++++.++|+.+++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.
T Consensus 306 ~flW~~r~~~~-~~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~ 384 (468)
T PLN02207 306 RFLWSLRTEEV-TNDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQL 384 (468)
T ss_pred cEEEEEeCCCc-cccccCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchh
Confidence 99999985321 11234889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhhceeEEeeec---CCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHH
Q 047540 302 NCRYTCNEWGVGMDITNS---GDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPV 378 (388)
Q Consensus 302 na~~v~~~~G~G~~l~~~---~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l 378 (388)
||+++++++|+|+.+... +.+..++.++|+++|+++|++ ++++||+||+++++++++|+.+||||.+++++||+++
T Consensus 385 Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~-~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~ 463 (468)
T PLN02207 385 NAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNK-DNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDV 463 (468)
T ss_pred hHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 999987879999987211 011346999999999999973 3567999999999999999999999999999999998
Q ss_pred HHhh
Q 047540 379 IKLI 382 (388)
Q Consensus 379 ~~~~ 382 (388)
...+
T Consensus 464 ~~~~ 467 (468)
T PLN02207 464 IGIK 467 (468)
T ss_pred Hhcc
Confidence 7653
No 6
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=1.1e-55 Score=438.24 Aligned_cols=360 Identities=28% Similarity=0.520 Sum_probs=276.6
Q ss_pred CCCCCCCCCccccHHHHHHHHHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHH
Q 047540 1 GLPDPSNENANQDANSLFESITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKG 80 (388)
Q Consensus 1 glp~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~ 80 (388)
|||++ .+ .+...++..+.+. +.+.+++++++. +|||||+|.+++|+..+|+++|||++.|++.+++.+..
T Consensus 71 glp~~--~~--~~~~~~~~~~~~~-~~~~l~~~l~~~-----~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~ 140 (456)
T PLN02210 71 GLPKD--DP--RAPETLLKSLNKV-GAKNLSKIIEEK-----RYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSV 140 (456)
T ss_pred CCCCC--cc--cCHHHHHHHHHHh-hhHHHHHHHhcC-----CCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHH
Confidence 56666 22 3455677777777 777788877764 79999999999999999999999999999998877776
Q ss_pred hhhhcc----cccC----C--CCC-----cccc-------cchh-HHHHHHHHHHhhccCCeEEEcChhhhhHHHHHHHH
Q 047540 81 CMQLRT----LEEN----T--TLT-----SLID-------LNSY-ATRVAIEAAKNAAKASAVVIHTFDALERQVLDALS 137 (388)
Q Consensus 81 ~~~~~~----~~~~----~--~~p-----r~~~-------~~~~-~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~~~~ 137 (388)
+.+++. .... . .+| +..+ .... +........+....++++++|||++||+..++..+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~ 220 (456)
T PLN02210 141 YYRYYMKTNSFPDLEDLNQTVELPALPLLEVRDLPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMA 220 (456)
T ss_pred HHhhhhccCCCCcccccCCeeeCCCCCCCChhhCChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHh
Confidence 554321 0000 0 122 1111 1111 11222233344567789999999999999999987
Q ss_pred hhCCCceecCCcccchh-hccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHH
Q 047540 138 AMFPNLFTIGPLQLLLN-QINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGL 216 (388)
Q Consensus 138 ~~~p~~~~vGpl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al 216 (388)
.. +++++|||++.... ... +. .. ....+.+.++.+++|.+||+.++ ++++|||||||....+.+++++++.+|
T Consensus 221 ~~-~~v~~VGPl~~~~~~~~~-~~--~~-~~~~~~~~~~~~~~~~~wld~~~-~~svvyvsfGS~~~~~~~~~~e~a~~l 294 (456)
T PLN02210 221 DL-KPVIPIGPLVSPFLLGDD-EE--ET-LDGKNLDMCKSDDCCMEWLDKQA-RSSVVYISFGSMLESLENQVETIAKAL 294 (456)
T ss_pred hc-CCEEEEcccCchhhcCcc-cc--cc-cccccccccccchHHHHHHhCCC-CCceEEEEecccccCCHHHHHHHHHHH
Confidence 74 67999999974210 000 00 00 00000123456678999999998 889999999999888999999999999
Q ss_pred hcCCCCEEEEEcCCCCCCCCCCCchhHHHhh-hcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCC
Q 047540 217 VNSNHPFLWIIRPDLVTGETADMPSEFEVKA-KETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPF 295 (388)
Q Consensus 217 ~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~ 295 (388)
+.++.+|||+++.+... ..+..+.++. ++++.+++|+||.+||+|+++++|||||||||++|++++|||||++|+
T Consensus 295 ~~~~~~flw~~~~~~~~----~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~ 370 (456)
T PLN02210 295 KNRGVPFLWVIRPKEKA----QNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPS 370 (456)
T ss_pred HhCCCCEEEEEeCCccc----cchhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEeccc
Confidence 99999999999853211 1234566665 478888999999999999999999999999999999999999999999
Q ss_pred ccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHH
Q 047540 296 LGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLE 375 (388)
Q Consensus 296 ~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v 375 (388)
++||+.||+++++++|+|+.+...+.++.++.++|+++|+++|.+++|++||+||++|++.+++|+.+||||.+++++||
T Consensus 371 ~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v 450 (456)
T PLN02210 371 WTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFI 450 (456)
T ss_pred ccccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 99999999999666999999932111246899999999999999888889999999999999999999999999999999
Q ss_pred HHHHH
Q 047540 376 QPVIK 380 (388)
Q Consensus 376 ~~l~~ 380 (388)
+.+..
T Consensus 451 ~~~~~ 455 (456)
T PLN02210 451 SDITI 455 (456)
T ss_pred HHHhc
Confidence 98753
No 7
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=1.8e-55 Score=436.02 Aligned_cols=342 Identities=27% Similarity=0.511 Sum_probs=273.3
Q ss_pred HHHHHHHHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhhcccc---c--
Q 047540 15 NSLFESITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTLE---E-- 89 (388)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~---~-- 89 (388)
...+...... +.+.++++++++. .+|+|||+|.+++|+..+|+++|||++.|++++++.++.+.+++... .
T Consensus 80 ~~~~~~~~~~-~~~~~~~~l~~~~---~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~ 155 (481)
T PLN02992 80 VTKIGVIMRE-AVPTLRSKIAEMH---QKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKEE 155 (481)
T ss_pred HHHHHHHHHH-hHHHHHHHHHhcC---CCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhccccccc
Confidence 3344444556 7788899988762 37899999999999999999999999999999988776554432110 0
Q ss_pred ------CCCCC-----c-------ccccchhHHHHHHHHHHhhccCCeEEEcChhhhhHHHHHHHHhh-------CCCce
Q 047540 90 ------NTTLT-----S-------LIDLNSYATRVAIEAAKNAAKASAVVIHTFDALERQVLDALSAM-------FPNLF 144 (388)
Q Consensus 90 ------~~~~p-----r-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~~~~~~-------~p~~~ 144 (388)
.-.+| + +..+.......+.+....+.+++++++|||++||+..++..+.. .++++
T Consensus 156 ~~~~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~ 235 (481)
T PLN02992 156 HTVQRKPLAMPGCEPVRFEDTLDAYLVPDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVY 235 (481)
T ss_pred cccCCCCcccCCCCccCHHHhhHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCCceE
Confidence 00112 1 11122222344445556667899999999999999999988642 25699
Q ss_pred ecCCcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEE
Q 047540 145 TIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFL 224 (388)
Q Consensus 145 ~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i 224 (388)
.|||+..... .. +.+++|.+|||.++ +++||||||||...++.+++++++.+|+.++++||
T Consensus 236 ~VGPl~~~~~----------------~~--~~~~~c~~wLd~~~-~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~fl 296 (481)
T PLN02992 236 PIGPLCRPIQ----------------SS--KTDHPVLDWLNKQP-NESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFV 296 (481)
T ss_pred EecCccCCcC----------------CC--cchHHHHHHHHcCC-CCceEEEeecccccCCHHHHHHHHHHHHHcCCCEE
Confidence 9999963210 00 13467999999998 78999999999999999999999999999999999
Q ss_pred EEEcCCCCC---------------C-CCCCCchhHHHhhhcCccc-ccccChHhhhcCCCcceeeeccCchhHHHHHhhC
Q 047540 225 WIIRPDLVT---------------G-ETADMPSEFEVKAKETGFI-ARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAG 287 (388)
Q Consensus 225 w~~~~~~~~---------------~-~~~~~~~~~~~~~~~~~~v-~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~G 287 (388)
|+++.+... . ....+|++|.+|+.+++.+ .+|+||.+||+|+++++|||||||||++||+++|
T Consensus 297 W~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~G 376 (481)
T PLN02992 297 WVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGG 376 (481)
T ss_pred EEEeCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcC
Confidence 999742110 0 1234888999999877655 6999999999999999999999999999999999
Q ss_pred CcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhC--CCC
Q 047540 288 VPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAA--PDG 365 (388)
Q Consensus 288 vP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~--~gg 365 (388)
||||+||+++||+.||+++++++|+|+.+.. ++..++.++|+++|+++|.+++|++|++|++++++.+++|+. +||
T Consensus 377 VP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~--~~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GG 454 (481)
T PLN02992 377 VPMIAWPLFAEQNMNAALLSDELGIAVRSDD--PKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGG 454 (481)
T ss_pred CCEEecCccchhHHHHHHHHHHhCeeEEecC--CCCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 9999999999999999999768999999920 013589999999999999988788999999999999999994 699
Q ss_pred ChHHHHHHHHHHHHHh
Q 047540 366 SSATNLEKLEQPVIKL 381 (388)
Q Consensus 366 ~s~~~~~~~v~~l~~~ 381 (388)
||..++++|++.+..-
T Consensus 455 SS~~~l~~~v~~~~~~ 470 (481)
T PLN02992 455 VAHESLCRVTKECQRF 470 (481)
T ss_pred chHHHHHHHHHHHHHH
Confidence 9999999999998765
No 8
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=2.6e-55 Score=438.12 Aligned_cols=350 Identities=30% Similarity=0.503 Sum_probs=278.7
Q ss_pred cHHHHHHHHHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhhccccc---
Q 047540 13 DANSLFESITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTLEE--- 89 (388)
Q Consensus 13 d~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~--- 89 (388)
+...++..+... +.+.++++++.+. .+++|||+|.++.|+..+|+++|||++.|++++++.++.+.+.+....
T Consensus 84 ~~~~~~~~~~~~-~~~~l~~~L~~l~---~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~ 159 (480)
T PLN00164 84 GVEEFISRYIQL-HAPHVRAAIAGLS---CPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALDEEVA 159 (480)
T ss_pred cHHHHHHHHHHh-hhHHHHHHHHhcC---CCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhhccccc
Confidence 344566666667 8888999988762 257999999999999999999999999999999988877665432110
Q ss_pred ---CC-----CCC---ccc---------ccchhHHHHHHHHHHhhccCCeEEEcChhhhhHHHHHHHHhh-------CCC
Q 047540 90 ---NT-----TLT---SLI---------DLNSYATRVAIEAAKNAAKASAVVIHTFDALERQVLDALSAM-------FPN 142 (388)
Q Consensus 90 ---~~-----~~p---r~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~~~~~~-------~p~ 142 (388)
.. .+| .+. .........+....+.+.+++++++|||++||+..++..+.. .|+
T Consensus 160 ~~~~~~~~~~~iPGlp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~~ 239 (480)
T PLN00164 160 VEFEEMEGAVDVPGLPPVPASSLPAPVMDKKSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRCTPGRPAPT 239 (480)
T ss_pred CcccccCcceecCCCCCCChHHCCchhcCCCcHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhccccccCCCCc
Confidence 00 012 111 111122233344455667899999999999999999998764 268
Q ss_pred ceecCCcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCC
Q 047540 143 LFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHP 222 (388)
Q Consensus 143 ~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~ 222 (388)
++.|||++..... ......+++|.+|||+++ .+++|||||||...++.+++.+++.+|+.++++
T Consensus 240 v~~vGPl~~~~~~---------------~~~~~~~~~~~~wLd~~~-~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~ 303 (480)
T PLN00164 240 VYPIGPVISLAFT---------------PPAEQPPHECVRWLDAQP-PASVVFLCFGSMGFFDAPQVREIAAGLERSGHR 303 (480)
T ss_pred eEEeCCCcccccc---------------CCCccchHHHHHHHHhCC-CCceEEEEecccccCCHHHHHHHHHHHHHcCCC
Confidence 9999999743210 011124568999999998 889999999999889999999999999999999
Q ss_pred EEEEEcCCCCC--------CCCCCCchhHHHhhhcCccc-ccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEec
Q 047540 223 FLWIIRPDLVT--------GETADMPSEFEVKAKETGFI-ARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICW 293 (388)
Q Consensus 223 ~iw~~~~~~~~--------~~~~~~~~~~~~~~~~~~~v-~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~ 293 (388)
|||+++.+... +....+|+++.+++.+++.+ .+|+||.+||+|+++++|||||||||++||+++|||||+|
T Consensus 304 flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~ 383 (480)
T PLN00164 304 FLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPW 383 (480)
T ss_pred EEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeC
Confidence 99999854211 11224788899988877766 4999999999999999999999999999999999999999
Q ss_pred CCccchhHhHHHHhhhhceeEEeeecCC-CCCCCHHHHHHHHHHHHcCc--hHHHHHHHHHHHHHHHHHHhCCCCChHHH
Q 047540 294 PFLGDQATNCRYTCNEWGVGMDITNSGD-DNQVGRNEVEKLVRELMEGE--KGMQMRNKASEWKRFAEEAAAPDGSSATN 370 (388)
Q Consensus 294 P~~~DQ~~na~~v~~~~G~G~~l~~~~~-~~~~~~~~l~~ai~~vl~~~--~~~~~~~~a~~l~~~~~~~~~~gg~s~~~ 370 (388)
|+++||+.||+++++++|+|+.+...++ +..++.++|+++|+++|.++ +|+.+|+||+++++++++++.+||||.++
T Consensus 384 P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~ 463 (480)
T PLN00164 384 PLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAA 463 (480)
T ss_pred CccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 9999999999988788999999832111 13479999999999999875 47889999999999999999999999999
Q ss_pred HHHHHHHHHHhh
Q 047540 371 LEKLEQPVIKLI 382 (388)
Q Consensus 371 ~~~~v~~l~~~~ 382 (388)
+++|++.+...+
T Consensus 464 l~~~v~~~~~~~ 475 (480)
T PLN00164 464 LQRLAREIRHGA 475 (480)
T ss_pred HHHHHHHHHhcc
Confidence 999999987653
No 9
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=5e-55 Score=430.68 Aligned_cols=343 Identities=27% Similarity=0.462 Sum_probs=271.6
Q ss_pred cHHHHHHHHHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCC-eEEEccCchhHHHHhhhhcccc---
Q 047540 13 DANSLFESITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIP-IALFFTIAARSFKGCMQLRTLE--- 88 (388)
Q Consensus 13 d~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP-~v~~~~~~~~~~~~~~~~~~~~--- 88 (388)
+....+...... +.+.++++++.+. .+++|||+|.+++|+..+|+++||| ++.|++++++....+.+++...
T Consensus 81 ~~~~~~~~~~~~-~~~~~~~~l~~l~---~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~~~ 156 (470)
T PLN03015 81 TIFTKMVVKMRA-MKPAVRDAVKSMK---RKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDTVV 156 (470)
T ss_pred cHHHHHHHHHHh-chHHHHHHHHhcC---CCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhccc
Confidence 344333444456 8899999998874 2689999999999999999999999 5888888877765554432100
Q ss_pred -c------CC-CCC---ccc---------ccchhHHHHHHHHHHhhccCCeEEEcChhhhhHHHHHHHHhh-------CC
Q 047540 89 -E------NT-TLT---SLI---------DLNSYATRVAIEAAKNAAKASAVVIHTFDALERQVLDALSAM-------FP 141 (388)
Q Consensus 89 -~------~~-~~p---r~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~~~~~~-------~p 141 (388)
. .. .+| .+. +........+....+.+.+++++++|||++||+..++..+.. .+
T Consensus 157 ~~~~~~~~~~~~vPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~ 236 (470)
T PLN03015 157 EGEYVDIKEPLKIPGCKPVGPKELMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMKV 236 (470)
T ss_pred ccccCCCCCeeeCCCCCCCChHHCCHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccccccCC
Confidence 0 00 122 111 111122333334445577899999999999999999998764 25
Q ss_pred CceecCCcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCC
Q 047540 142 NLFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNH 221 (388)
Q Consensus 142 ~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~ 221 (388)
++++|||++... .. .+.+++|.+|||.++ +++||||||||...++.+++.+++.+|+.+++
T Consensus 237 ~v~~VGPl~~~~-------------~~-----~~~~~~~~~WLd~~~-~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~ 297 (470)
T PLN03015 237 PVYPIGPIVRTN-------------VH-----VEKRNSIFEWLDKQG-ERSVVYVCLGSGGTLTFEQTVELAWGLELSGQ 297 (470)
T ss_pred ceEEecCCCCCc-------------cc-----ccchHHHHHHHHhCC-CCCEEEEECCcCCcCCHHHHHHHHHHHHhCCC
Confidence 699999997311 00 012357999999998 89999999999999999999999999999999
Q ss_pred CEEEEEcCCCC--------CC-CCCCCchhHHHhhhcCccc-ccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEE
Q 047540 222 PFLWIIRPDLV--------TG-ETADMPSEFEVKAKETGFI-ARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMI 291 (388)
Q Consensus 222 ~~iw~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~v-~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i 291 (388)
+|||+++.+.. .+ ....+|+++.+|+.+++.+ .+|+||.+||+|+++++|||||||||++|++++|||||
T Consensus 298 ~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v 377 (470)
T PLN03015 298 RFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIV 377 (470)
T ss_pred cEEEEEecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEE
Confidence 99999974311 01 1225889999999888865 69999999999999999999999999999999999999
Q ss_pred ecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC--chHHHHHHHHHHHHHHHHHHhCCCCChHH
Q 047540 292 CWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG--EKGMQMRNKASEWKRFAEEAAAPDGSSAT 369 (388)
Q Consensus 292 ~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~--~~~~~~~~~a~~l~~~~~~~~~~gg~s~~ 369 (388)
++|+++||+.||+++++++|+|+.+.....+..++.++|+++|+++|.+ ++|+++|+||+++++++++|+.+||||.+
T Consensus 378 ~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~ 457 (470)
T PLN03015 378 AWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYN 457 (470)
T ss_pred ecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 9999999999999998899999999311112368999999999999963 56889999999999999999999999999
Q ss_pred HHHHHHHHH
Q 047540 370 NLEKLEQPV 378 (388)
Q Consensus 370 ~~~~~v~~l 378 (388)
++++|++++
T Consensus 458 nl~~~~~~~ 466 (470)
T PLN03015 458 SLFEWAKRC 466 (470)
T ss_pred HHHHHHHhc
Confidence 999999875
No 10
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=9.3e-55 Score=432.95 Aligned_cols=364 Identities=28% Similarity=0.459 Sum_probs=275.4
Q ss_pred CCCCCCCCCccccHH----HHHHHHHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchh
Q 047540 1 GLPDPSNENANQDAN----SLFESITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAAR 76 (388)
Q Consensus 1 glp~~~~~~~~~d~~----~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~ 76 (388)
|||+| .+..++.. ..+...... +.+.+.++++++ +.+++|||+|.+++|+..+|+++|||++.|++++++
T Consensus 74 ~lPdG--~~~~~~~~~~~~~~~~~a~~~-~~~~~~~~l~~~---~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~ 147 (477)
T PLN02863 74 SIPSG--VENVKDLPPSGFPLMIHALGE-LYAPLLSWFRSH---PSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAM 147 (477)
T ss_pred CCCCC--CcChhhcchhhHHHHHHHHHH-hHHHHHHHHHhC---CCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHH
Confidence 57888 55444432 223333345 677777777764 237899999999999999999999999999999999
Q ss_pred HHHHhhhhcccccC---------C----CCCc---cc--c---------cchhHHHHHHHHHHhhccCCeEEEcChhhhh
Q 047540 77 SFKGCMQLRTLEEN---------T----TLTS---LI--D---------LNSYATRVAIEAAKNAAKASAVVIHTFDALE 129 (388)
Q Consensus 77 ~~~~~~~~~~~~~~---------~----~~pr---~~--~---------~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le 129 (388)
.++.+.+++...+. . .+|. +. + ........+.+.......++++++|||++||
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE 227 (477)
T PLN02863 148 ALSIMYSLWREMPTKINPDDQNEILSFSKIPNCPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELE 227 (477)
T ss_pred HHHHHHHHhhcccccccccccccccccCCCCCCCCcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHH
Confidence 88876554321000 0 1221 11 1 1111223333333334567889999999999
Q ss_pred HHHHHHHHhhC--CCceecCCcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHH
Q 047540 130 RQVLDALSAMF--PNLFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQ 207 (388)
Q Consensus 130 ~~~l~~~~~~~--p~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~ 207 (388)
+..+++.+..+ ++++.|||+....... +. ...++.+.+..+++|.+||+.++ ++++|||||||+...+.+
T Consensus 228 ~~~~~~~~~~~~~~~v~~IGPL~~~~~~~--~~-----~~~~~~~~~~~~~~~~~WLd~~~-~~svVyvsfGS~~~~~~~ 299 (477)
T PLN02863 228 GIYLEHLKKELGHDRVWAVGPILPLSGEK--SG-----LMERGGPSSVSVDDVMTWLDTCE-DHKVVYVCFGSQVVLTKE 299 (477)
T ss_pred HHHHHHHHhhcCCCCeEEeCCCccccccc--cc-----ccccCCcccccHHHHHHHHhcCC-CCceEEEEeeceecCCHH
Confidence 99999998764 6799999997432100 00 00000111113467999999998 899999999999999999
Q ss_pred HHHHHHHHHhcCCCCEEEEEcCCCCCC-CCCCCchhHHHhhhcCc-ccccccChHhhhcCCCcceeeeccCchhHHHHHh
Q 047540 208 QLTEVAMGLVNSNHPFLWIIRPDLVTG-ETADMPSEFEVKAKETG-FIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLC 285 (388)
Q Consensus 208 ~~~~~~~al~~~~~~~iw~~~~~~~~~-~~~~~~~~~~~~~~~~~-~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~ 285 (388)
++.+++.+|+.++++|||+++.+.... ....+|+++.++..++. ++.+|+||.+||+|+++++|||||||||++||++
T Consensus 300 ~~~ela~gL~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~ 379 (477)
T PLN02863 300 QMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLV 379 (477)
T ss_pred HHHHHHHHHHhCCCcEEEEECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHH
Confidence 999999999999999999998543211 12347888888876544 5579999999999999999999999999999999
Q ss_pred hCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCC
Q 047540 286 AGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDG 365 (388)
Q Consensus 286 ~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg 365 (388)
+|||||++|+++||+.||+++++++|+|+.+.. ++...++.+++.++|+++|.+ +++||+||+++++.+++|+.+||
T Consensus 380 ~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~-~~~~~~~~~~v~~~v~~~m~~--~~~~r~~a~~l~e~a~~Av~~gG 456 (477)
T PLN02863 380 AGVPMLAWPMAADQFVNASLLVDELKVAVRVCE-GADTVPDSDELARVFMESVSE--NQVERERAKELRRAALDAIKERG 456 (477)
T ss_pred cCCCEEeCCccccchhhHHHHHHhhceeEEecc-CCCCCcCHHHHHHHHHHHhhc--cHHHHHHHHHHHHHHHHHhccCC
Confidence 999999999999999999998788999999931 112346899999999999942 23599999999999999999999
Q ss_pred ChHHHHHHHHHHHHHh
Q 047540 366 SSATNLEKLEQPVIKL 381 (388)
Q Consensus 366 ~s~~~~~~~v~~l~~~ 381 (388)
||.+++++||+.+...
T Consensus 457 SS~~~l~~~v~~i~~~ 472 (477)
T PLN02863 457 SSVKDLDGFVKHVVEL 472 (477)
T ss_pred cHHHHHHHHHHHHHHh
Confidence 9999999999998765
No 11
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=1.4e-54 Score=429.69 Aligned_cols=338 Identities=28% Similarity=0.540 Sum_probs=270.4
Q ss_pred cHHHHHHHHHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhhccc-----
Q 047540 13 DANSLFESITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTL----- 87 (388)
Q Consensus 13 d~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~----- 87 (388)
++..+++++... +.+.++++++.+... .+++|||+|.++.|+..+|+++|||++.|++++++....+.+++..
T Consensus 75 ~~~~l~~a~~~~-~~~~l~~ll~~l~~~-~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~ 152 (448)
T PLN02562 75 DFFSIENSMENT-MPPQLERLLHKLDED-GEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGL 152 (448)
T ss_pred cHHHHHHHHHHh-chHHHHHHHHHhcCC-CCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhccc
Confidence 455666776667 889999999987543 2468999999999999999999999999999988766654433210
Q ss_pred ---cc-----CC--CCC---ccc---------cc--chhHHHHHHHHHHhhccCCeEEEcChhhhhHHHHHHHH-----h
Q 047540 88 ---EE-----NT--TLT---SLI---------DL--NSYATRVAIEAAKNAAKASAVVIHTFDALERQVLDALS-----A 138 (388)
Q Consensus 88 ---~~-----~~--~~p---r~~---------~~--~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~~~~-----~ 138 (388)
.. .. .+| .+. .. .......+.+..+...+++++++|||++||+..++..+ +
T Consensus 153 ~~~~~~~~~~~~~~~~Pg~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~ 232 (448)
T PLN02562 153 ISETGCPRQLEKICVLPEQPLLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNG 232 (448)
T ss_pred cccccccccccccccCCCCCCCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccc
Confidence 00 00 122 111 11 11224445555566677899999999999998888654 3
Q ss_pred hCCCceecCCcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCc-cCCHHHHHHHHHHHh
Q 047540 139 MFPNLFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSV-YLTKQQLTEVAMGLV 217 (388)
Q Consensus 139 ~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~ 217 (388)
..|+++.|||++..... . ... .+.++.+.+|.+||+.++ ++++|||||||+. ..+.+++.+++.+|+
T Consensus 233 ~~~~v~~iGpl~~~~~~----~-----~~~--~~~~~~~~~c~~wLd~~~-~~svvyvsfGS~~~~~~~~~~~~l~~~l~ 300 (448)
T PLN02562 233 QNPQILQIGPLHNQEAT----T-----ITK--PSFWEEDMSCLGWLQEQK-PNSVIYISFGSWVSPIGESNVRTLALALE 300 (448)
T ss_pred cCCCEEEecCccccccc----c-----cCC--CccccchHHHHHHHhcCC-CCceEEEEecccccCCCHHHHHHHHHHHH
Confidence 45789999999753210 0 001 122334567999999998 7899999999976 678899999999999
Q ss_pred cCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCcc
Q 047540 218 NSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLG 297 (388)
Q Consensus 218 ~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~ 297 (388)
.++++|||+++.... ..+|+++.++.++|+++.+|+||.+||+|+++++|||||||||++|++++|||||++|+++
T Consensus 301 ~~g~~fiW~~~~~~~----~~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~ 376 (448)
T PLN02562 301 ASGRPFIWVLNPVWR----EGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAG 376 (448)
T ss_pred HCCCCEEEEEcCCch----hhCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCccc
Confidence 999999999975321 1378889999999999999999999999999999999999999999999999999999999
Q ss_pred chhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHH
Q 047540 298 DQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQP 377 (388)
Q Consensus 298 DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~ 377 (388)
||+.||+++++.+|+|+.+ . .++.++++++|+++|++++ ||+||+++++.++++ .+||||.+++++||+.
T Consensus 377 DQ~~na~~~~~~~g~g~~~-----~-~~~~~~l~~~v~~~l~~~~---~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~ 446 (448)
T PLN02562 377 DQFVNCAYIVDVWKIGVRI-----S-GFGQKEVEEGLRKVMEDSG---MGERLMKLRERAMGE-EARLRSMMNFTTLKDE 446 (448)
T ss_pred chHHHHHHHHHHhCceeEe-----C-CCCHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHH
Confidence 9999999997668999888 3 5899999999999998877 999999999998877 6789999999999997
Q ss_pred H
Q 047540 378 V 378 (388)
Q Consensus 378 l 378 (388)
+
T Consensus 447 ~ 447 (448)
T PLN02562 447 L 447 (448)
T ss_pred h
Confidence 6
No 12
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=3.5e-54 Score=428.37 Aligned_cols=349 Identities=33% Similarity=0.556 Sum_probs=263.4
Q ss_pred HHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhh----ccc--cc-----
Q 047540 21 ITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQL----RTL--EE----- 89 (388)
Q Consensus 21 ~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~----~~~--~~----- 89 (388)
.... +.+.++++++.. +++++|||+|.++.|+..+|+++|||++.|++++++....+.++ +.. ..
T Consensus 101 ~~~~-l~~~l~~lL~~~---~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (491)
T PLN02534 101 AVDK-LQQPLERFLEQA---KPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHNAHLSVSSDSEPF 176 (491)
T ss_pred HHHH-hHHHHHHHHHhc---CCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHhcccccCCCCCcee
Confidence 3345 667788887754 24789999999999999999999999999999998777653211 100 00
Q ss_pred --CCCCCc--cc--ccc-----hhHHHHHHHHHH-hhccCCeEEEcChhhhhHHHHHHHHhhC-CCceecCCcccchhhc
Q 047540 90 --NTTLTS--LI--DLN-----SYATRVAIEAAK-NAAKASAVVIHTFDALERQVLDALSAMF-PNLFTIGPLQLLLNQI 156 (388)
Q Consensus 90 --~~~~pr--~~--~~~-----~~~~~~~~~~~~-~~~~~~~~l~~s~~~le~~~l~~~~~~~-p~~~~vGpl~~~~~~~ 156 (388)
+++.++ +. +.. ......+..... ....++++++|||++||+..++.++... ++++.|||+.......
T Consensus 177 ~iPg~p~~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~~~~~ 256 (491)
T PLN02534 177 VVPGMPQSIEITRAQLPGAFVSLPDLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLCNKRN 256 (491)
T ss_pred ecCCCCccccccHHHCChhhcCcccHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECccccccccc
Confidence 111100 11 100 011122222222 2235679999999999999999998765 6899999997422100
Q ss_pred cccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCC-
Q 047540 157 NEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGE- 235 (388)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~- 235 (388)
. . ....+.....++++|++|||.++ +++||||||||......+++.+++.+|+.++.+|||+++.+.....
T Consensus 257 ~--~-----~~~~~~~~~~~~~~cl~wLd~~~-~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~ 328 (491)
T PLN02534 257 L--D-----KFERGNKASIDETQCLEWLDSMK-PRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSEL 328 (491)
T ss_pred c--c-----ccccCCccccchHHHHHHHhcCC-CCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccch
Confidence 0 0 00000000112357999999998 8899999999999999999999999999999999999985321111
Q ss_pred -CCCCchhHHHhhh-cCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhcee
Q 047540 236 -TADMPSEFEVKAK-ETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVG 313 (388)
Q Consensus 236 -~~~~~~~~~~~~~-~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G 313 (388)
...+|++|.+++. .++.+.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++.+|+|
T Consensus 329 ~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vG 408 (491)
T PLN02534 329 EEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIG 408 (491)
T ss_pred hhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcce
Confidence 1136788888864 45556799999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeee-----cC-CC--C-CCCHHHHHHHHHHHHc--CchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHh
Q 047540 314 MDITN-----SG-DD--N-QVGRNEVEKLVRELME--GEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPVIKL 381 (388)
Q Consensus 314 ~~l~~-----~~-~~--~-~~~~~~l~~ai~~vl~--~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~~~ 381 (388)
+.+.- ++ ++ . .++.++|+++|+++|. +++|+++|+||++|++++++++.+||||.+++++||+.+...
T Consensus 409 v~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~~~ 487 (491)
T PLN02534 409 VRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDVLKQ 487 (491)
T ss_pred EEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 98821 01 11 1 4899999999999997 456889999999999999999999999999999999998754
No 13
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=3.4e-54 Score=423.47 Aligned_cols=351 Identities=20% Similarity=0.349 Sum_probs=272.9
Q ss_pred CCCCCCCCCccccHH----HHHHHHHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchh
Q 047540 1 GLPDPSNENANQDAN----SLFESITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAAR 76 (388)
Q Consensus 1 glp~~~~~~~~~d~~----~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~ 76 (388)
|||+| .++..+.. ..+....+. +.+.++++++.+ ++||||+|. +.|+..+|+++|||++.|++++++
T Consensus 70 glp~g--~e~~~~~~~~~~~~~~~a~~~-~~~~~~~~l~~~-----~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~ 140 (453)
T PLN02764 70 GLPVG--TETVSEIPVTSADLLMSAMDL-TRDQVEVVVRAV-----EPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSAS 140 (453)
T ss_pred CCCCc--ccccccCChhHHHHHHHHHHH-hHHHHHHHHHhC-----CCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHH
Confidence 56776 44433332 223333445 778889998875 789999995 899999999999999999999998
Q ss_pred HHHHhhhhccc---ccCCCC----C-ccc------c--c---chhHHHHHHHHHHhhccCCeEEEcChhhhhHHHHHHHH
Q 047540 77 SFKGCMQLRTL---EENTTL----T-SLI------D--L---NSYATRVAIEAAKNAAKASAVVIHTFDALERQVLDALS 137 (388)
Q Consensus 77 ~~~~~~~~~~~---~~~~~~----p-r~~------~--~---~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~~~~ 137 (388)
.++.+...... ..+++. . +.. . . ..............+.+++++++|||++||+.++++.+
T Consensus 141 ~~~~~~~~~~~~~~~~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~ 220 (453)
T PLN02764 141 TIASMLVPGGELGVPPPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIE 220 (453)
T ss_pred HHHHHhcccccCCCCCCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHH
Confidence 87765431100 001111 0 000 0 0 01122333334355677889999999999999999998
Q ss_pred hhC-CCceecCCcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHH
Q 047540 138 AMF-PNLFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGL 216 (388)
Q Consensus 138 ~~~-p~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al 216 (388)
... ++++.|||+..... . . ...+++|.+|||.++ +++||||||||+..++.+++.+++.+|
T Consensus 221 ~~~~~~v~~VGPL~~~~~------------~---~--~~~~~~cl~WLD~q~-~~sVvyvsfGS~~~~~~~q~~ela~gL 282 (453)
T PLN02764 221 KHCRKKVLLTGPVFPEPD------------K---T--RELEERWVKWLSGYE-PDSVVFCALGSQVILEKDQFQELCLGM 282 (453)
T ss_pred hhcCCcEEEeccCccCcc------------c---c--ccchhHHHHHHhCCC-CCceEEEeecccccCCHHHHHHHHHHH
Confidence 753 57999999964220 0 0 012467999999999 899999999999999999999999999
Q ss_pred hcCCCCEEEEEcCCCCC-CCCCCCchhHHHhhhcCccc-ccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecC
Q 047540 217 VNSNHPFLWIIRPDLVT-GETADMPSEFEVKAKETGFI-ARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWP 294 (388)
Q Consensus 217 ~~~~~~~iw~~~~~~~~-~~~~~~~~~~~~~~~~~~~v-~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P 294 (388)
+..+.+|+|+++..... .....+|++|++++++++.+ .+|+||.+||+|+++++|||||||||++||+++|||||++|
T Consensus 283 ~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P 362 (453)
T PLN02764 283 ELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVP 362 (453)
T ss_pred HhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCC
Confidence 99999999999853221 11335899999999888766 59999999999999999999999999999999999999999
Q ss_pred CccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC--chHHHHHHHHHHHHHHHHHHhCCCCChHHHHH
Q 047540 295 FLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG--EKGMQMRNKASEWKRFAEEAAAPDGSSATNLE 372 (388)
Q Consensus 295 ~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~--~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~ 372 (388)
++.||+.||+++++.+|+|+.+. .++...++.++|+++|+++|++ ++|+++|+|++++++.+++ ||||..+++
T Consensus 363 ~~~DQ~~na~~l~~~~g~gv~~~-~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~----~GSS~~~l~ 437 (453)
T PLN02764 363 QLGDQVLNTRLLSDELKVSVEVA-REETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLAS----PGLLTGYVD 437 (453)
T ss_pred cccchHHHHHHHHHHhceEEEec-cccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHh----cCCHHHHHH
Confidence 99999999999977799999982 1111358999999999999987 4578899999999999974 799999999
Q ss_pred HHHHHHHHhhh
Q 047540 373 KLEQPVIKLIE 383 (388)
Q Consensus 373 ~~v~~l~~~~~ 383 (388)
+||+.+.+..+
T Consensus 438 ~lv~~~~~~~~ 448 (453)
T PLN02764 438 NFIESLQDLVS 448 (453)
T ss_pred HHHHHHHHhcc
Confidence 99999988753
No 14
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=3.9e-54 Score=431.34 Aligned_cols=342 Identities=30% Similarity=0.534 Sum_probs=262.5
Q ss_pred ccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhh----cc-ccc---CCC-CCcc
Q 047540 26 MLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQL----RT-LEE---NTT-LTSL 96 (388)
Q Consensus 26 ~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~----~~-~~~---~~~-~pr~ 96 (388)
+.+.++++++.. +|||||+|.++.|+..+|+++|||++.|++++++....+... +. ... ..+ +|.+
T Consensus 110 l~~~l~~~l~~~-----~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~ 184 (482)
T PLN03007 110 FKDQLEKLLETT-----RPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASYCIRVHKPQKKVASSSEPFVIPDL 184 (482)
T ss_pred HHHHHHHHHhcC-----CCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHHHHHHHhcccccccCCCCceeeCCCC
Confidence 444455555432 799999999999999999999999999999988776553321 11 000 000 1211
Q ss_pred ------c-------ccchhHHHHHHHHHHhhccCCeEEEcChhhhhHHHHHHHHhhC-CCceecCCcccchhhccccCCC
Q 047540 97 ------I-------DLNSYATRVAIEAAKNAAKASAVVIHTFDALERQVLDALSAMF-PNLFTIGPLQLLLNQINEQGGN 162 (388)
Q Consensus 97 ------~-------~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~~~~~~~-p~~~~vGpl~~~~~~~~~~~~~ 162 (388)
. .....+..++....+...+++++++|||++||++.++.++... +++++|||+........ +.
T Consensus 185 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGPl~~~~~~~~-~~-- 261 (482)
T PLN03007 185 PGDIVITEEQINDADEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYKSFVAKRAWHIGPLSLYNRGFE-EK-- 261 (482)
T ss_pred CCccccCHHhcCCCCCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHHhccCCCEEEEccccccccccc-cc--
Confidence 1 1122233444445556678899999999999999888887765 47999999864321100 00
Q ss_pred CCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCC-CCCCCCch
Q 047540 163 SLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVT-GETADMPS 241 (388)
Q Consensus 163 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~-~~~~~~~~ 241 (388)
. ..+ .+.+..+.+|.+||+.++ ++++|||||||+...+.+++.+++.+|+.++++|||+++.+... .....+|+
T Consensus 262 ~--~~~--~~~~~~~~~~~~wLd~~~-~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~lp~ 336 (482)
T PLN03007 262 A--ERG--KKANIDEQECLKWLDSKK-PDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPE 336 (482)
T ss_pred c--ccC--CccccchhHHHHHHhcCC-CCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhcCCH
Confidence 0 001 112223467999999998 89999999999988889999999999999999999999864321 11234788
Q ss_pred hHHHhhh-cCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecC
Q 047540 242 EFEVKAK-ETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSG 320 (388)
Q Consensus 242 ~~~~~~~-~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 320 (388)
++.++.. .|+.+.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+++|+.+....
T Consensus 337 ~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~ 416 (482)
T PLN03007 337 GFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKK 416 (482)
T ss_pred HHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEecccc
Confidence 8888874 455668999999999999999999999999999999999999999999999999999877667777661110
Q ss_pred ----CCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHH
Q 047540 321 ----DDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPVIK 380 (388)
Q Consensus 321 ----~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~~ 380 (388)
+...++.++|+++|+++|.+++|++||+||+++++.+++|+.+||||..++++||+.+.+
T Consensus 417 ~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~~~ 480 (482)
T PLN03007 417 LVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFMEELNS 480 (482)
T ss_pred ccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 124689999999999999998788899999999999999999999999999999998875
No 15
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=2.6e-54 Score=425.60 Aligned_cols=336 Identities=32% Similarity=0.530 Sum_probs=264.1
Q ss_pred cHHHHHHHHHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhhcccc----
Q 047540 13 DANSLFESITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTLE---- 88 (388)
Q Consensus 13 d~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~---- 88 (388)
+...++..+... +.+.++++++++... .+++|||+|.++.|+..+|+++|||++.|++++++.++.+.+++...
T Consensus 84 ~~~~~~~~~~~~-~~~~~~~~l~~l~~~-~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~~~~~ 161 (451)
T PLN03004 84 HHESLLLEILCF-SNPSVHRTLFSLSRN-FNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDETTP 161 (451)
T ss_pred CHHHHHHHHHHh-hhHHHHHHHHhcCCC-CCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhcccccc
Confidence 334444445566 888899999987322 35699999999999999999999999999999998888765543110
Q ss_pred -----cCC--CCC---ccc---------ccchhHHHHHHHHHHhhccCCeEEEcChhhhhHHHHHHHHhh--CCCceecC
Q 047540 89 -----ENT--TLT---SLI---------DLNSYATRVAIEAAKNAAKASAVVIHTFDALERQVLDALSAM--FPNLFTIG 147 (388)
Q Consensus 89 -----~~~--~~p---r~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~~~~~~--~p~~~~vG 147 (388)
... .+| .++ .........+......+.+++++++|||++||+..++.++.. .++++.||
T Consensus 162 ~~~~~~~~~v~iPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vG 241 (451)
T PLN03004 162 GKNLKDIPTVHIPGVPPMKGSDMPKAVLERDDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEELCFRNIYPIG 241 (451)
T ss_pred ccccccCCeecCCCCCCCChHHCchhhcCCchHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEe
Confidence 000 112 111 111122344455556667889999999999999999999775 25899999
Q ss_pred CcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEE
Q 047540 148 PLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWII 227 (388)
Q Consensus 148 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~ 227 (388)
|+...... ... . . ..+.+|.+|||.++ +++||||||||...++.+++++++.+|+.++.+|||++
T Consensus 242 Pl~~~~~~----------~~~--~-~-~~~~~c~~wLd~~~-~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~ 306 (451)
T PLN03004 242 PLIVNGRI----------EDR--N-D-NKAVSCLNWLDSQP-EKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVV 306 (451)
T ss_pred eeccCccc----------ccc--c-c-chhhHHHHHHHhCC-CCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 99742210 000 1 1 12457999999998 88999999999999999999999999999999999999
Q ss_pred cCCCCCC----CCC-CCchhHHHhhhcCc-ccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhH
Q 047540 228 RPDLVTG----ETA-DMPSEFEVKAKETG-FIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQAT 301 (388)
Q Consensus 228 ~~~~~~~----~~~-~~~~~~~~~~~~~~-~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~ 301 (388)
+...... ... .+|++|++|++++. .+.+|+||.+||+|+++++|||||||||++|++++|||||++|++.||+.
T Consensus 307 r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~ 386 (451)
T PLN03004 307 RNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRF 386 (451)
T ss_pred cCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchh
Confidence 8532100 112 37889999987655 55799999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHH
Q 047540 302 NCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSAT 369 (388)
Q Consensus 302 na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~ 369 (388)
||+++++++|+|+.+.. ++...++.++|+++|+++|++++ ||+||+++++..+.|+++||||.+
T Consensus 387 na~~~~~~~g~g~~l~~-~~~~~~~~e~l~~av~~vm~~~~---~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 387 NRVMIVDEIKIAISMNE-SETGFVSSTEVEKRVQEIIGECP---VRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred hHHHHHHHhCceEEecC-CcCCccCHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999777899999931 11125799999999999999876 999999999999999999999853
No 16
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=5.4e-54 Score=425.12 Aligned_cols=358 Identities=26% Similarity=0.435 Sum_probs=274.6
Q ss_pred CCCCCCCCCccccHH----HHHHHHHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchh
Q 047540 1 GLPDPSNENANQDAN----SLFESITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAAR 76 (388)
Q Consensus 1 glp~~~~~~~~~d~~----~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~ 76 (388)
|||+| .+.++++. .++...... +.+.++++++++ +++|||+|.++.|+..+|+++|||++.|++++++
T Consensus 72 glp~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~-----~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~ 143 (472)
T PLN02670 72 GLPSS--AESSTDVPYTKQQLLKKAFDL-LEPPLTTFLETS-----KPDWIIYDYASHWLPSIAAELGISKAFFSLFTAA 143 (472)
T ss_pred CCCCC--cccccccchhhHHHHHHHHHH-hHHHHHHHHHhC-----CCcEEEECCcchhHHHHHHHcCCCEEEEehhhHH
Confidence 57766 44444543 345555666 888888888875 7899999999999999999999999999999887
Q ss_pred HHHHhhhhccc-------c-------cCCCCC---c--cc--cc---------chhHHHHHHHHHHhhccCCeEEEcChh
Q 047540 77 SFKGCMQLRTL-------E-------ENTTLT---S--LI--DL---------NSYATRVAIEAAKNAAKASAVVIHTFD 126 (388)
Q Consensus 77 ~~~~~~~~~~~-------~-------~~~~~p---r--~~--~~---------~~~~~~~~~~~~~~~~~~~~~l~~s~~ 126 (388)
.++.+.+.... . .++++| . +. +. .......+.+....+.+++++++|||+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~ 223 (472)
T PLN02670 144 TLSFIGPPSSLMEGGDLRSTAEDFTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSP 223 (472)
T ss_pred HHHHHhhhHhhhhcccCCCccccccCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHH
Confidence 77664322100 0 011112 0 10 00 101122223333445678999999999
Q ss_pred hhhHHHHHHHHhhC-CCceecCCcccchhhccccCCCCCCCCCCCCCCc-ccchHHHHHhcCCCCCCCcEEEeeCCCccC
Q 047540 127 ALERQVLDALSAMF-PNLFTIGPLQLLLNQINEQGGNSLSSTGYKYNLW-KEETECLQWLDSKELPNSVVYVNFGSSVYL 204 (388)
Q Consensus 127 ~le~~~l~~~~~~~-p~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~ 204 (388)
+||+..++..+... ++++.|||+....... ... .... ..+++|.+|||.++ +++||||||||+..+
T Consensus 224 eLE~~~l~~l~~~~~~~v~~VGPl~~~~~~~---------~~~--~~~~~~~~~~~~~wLd~~~-~~sVvyvsfGS~~~l 291 (472)
T PLN02670 224 EFEPEWFDLLSDLYRKPIIPIGFLPPVIEDD---------EED--DTIDVKGWVRIKEWLDKQR-VNSVVYVALGTEASL 291 (472)
T ss_pred HHhHHHHHHHHHhhCCCeEEEecCCcccccc---------ccc--cccccchhHHHHHHHhcCC-CCceEEEEecccccC
Confidence 99999999998764 5799999997431100 000 0000 11257999999998 789999999999999
Q ss_pred CHHHHHHHHHHHhcCCCCEEEEEcCCCCC--CCCCCCchhHHHhhhcCccc-ccccChHhhhcCCCcceeeeccCchhHH
Q 047540 205 TKQQLTEVAMGLVNSNHPFLWIIRPDLVT--GETADMPSEFEVKAKETGFI-ARWCPQEEVLNHPAVGGFFTHSGWNSTI 281 (388)
Q Consensus 205 ~~~~~~~~~~al~~~~~~~iw~~~~~~~~--~~~~~~~~~~~~~~~~~~~v-~~~~pq~~~L~~~~~~~~IthgG~~s~~ 281 (388)
+.+++.+++.+|+.++++|||+++..... +....+|++|.+++.+++.+ .+|+||.+||+|+++++|||||||||++
T Consensus 292 ~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~ 371 (472)
T PLN02670 292 RREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVV 371 (472)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHH
Confidence 99999999999999999999999853211 11235899999999888776 6999999999999999999999999999
Q ss_pred HHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHh
Q 047540 282 ESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAA 361 (388)
Q Consensus 282 eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~ 361 (388)
|++++|||||++|+++||+.||+++ +++|+|+.+...+++..++.++|+++|+++|.+++|++||+||+++++.+++
T Consensus 372 Eai~~GVP~l~~P~~~DQ~~Na~~v-~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~-- 448 (472)
T PLN02670 372 EGLGFGRVLILFPVLNEQGLNTRLL-HGKKLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGD-- 448 (472)
T ss_pred HHHHcCCCEEeCcchhccHHHHHHH-HHcCeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhC--
Confidence 9999999999999999999999999 5789999993221123589999999999999988788899999999999995
Q ss_pred CCCCChHHHHHHHHHHHHHhhh
Q 047540 362 APDGSSATNLEKLEQPVIKLIE 383 (388)
Q Consensus 362 ~~gg~s~~~~~~~v~~l~~~~~ 383 (388)
.+...+.+++|+++|.+..+
T Consensus 449 --~~~~~~~~~~~~~~l~~~~~ 468 (472)
T PLN02670 449 --MDRNNRYVDELVHYLRENRS 468 (472)
T ss_pred --cchhHHHHHHHHHHHHHhcc
Confidence 36667889999998877653
No 17
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=3.4e-54 Score=430.68 Aligned_cols=349 Identities=27% Similarity=0.461 Sum_probs=272.7
Q ss_pred HHHHHHhccccHHHHHHHHHhhcC----CC-CccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhhccc---c
Q 047540 17 LFESITNNVMLQPFLDLLQKLKSS----SN-SVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTL---E 88 (388)
Q Consensus 17 ~~~~~~~~~~~~~~~~ll~~l~~~----~~-~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~---~ 88 (388)
.+..+... +.+.++++++.+..+ +. +++|||+|.+++|+..+|+++|||++.|++++++.++.+.+.+.. .
T Consensus 88 ~~~~~~~~-~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~~~~~~~~ 166 (475)
T PLN02167 88 YILEFVKK-MVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLPERHRKT 166 (475)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHHHHHhcccc
Confidence 33444455 667777777776421 22 469999999999999999999999999999998887765543210 0
Q ss_pred c-----CC-----CCCc----cc--ccch-----hHHHHHHHHHHhhccCCeEEEcChhhhhHHHHHHHHhh---CCCce
Q 047540 89 E-----NT-----TLTS----LI--DLNS-----YATRVAIEAAKNAAKASAVVIHTFDALERQVLDALSAM---FPNLF 144 (388)
Q Consensus 89 ~-----~~-----~~pr----~~--~~~~-----~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~~~~~~---~p~~~ 144 (388)
. .. .+|. +. +... .....+....+...+++++++|||++||+..++..+.. .|+++
T Consensus 167 ~~~~~~~~~~~~~~iPgl~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~ 246 (475)
T PLN02167 167 ASEFDLSSGEEELPIPGFVNSVPTKVLPPGLFMKESYEAWVEIAERFPEAKGILVNSFTELEPNAFDYFSRLPENYPPVY 246 (475)
T ss_pred ccccccCCCCCeeECCCCCCCCChhhCchhhhCcchHHHHHHHHHhhcccCEeeeccHHHHHHHHHHHHHhhcccCCeeE
Confidence 0 00 0121 11 1100 11233445556667889999999999999999988654 47899
Q ss_pred ecCCcccchhhccccCCCCCCCCCCCCCCc-ccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCE
Q 047540 145 TIGPLQLLLNQINEQGGNSLSSTGYKYNLW-KEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPF 223 (388)
Q Consensus 145 ~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~ 223 (388)
+|||++..... .. ...+ ..+.+|.+||+.++ .+++|||||||+...+.+++.+++.+|+.++++|
T Consensus 247 ~vGpl~~~~~~----------~~---~~~~~~~~~~~~~wld~~~-~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~f 312 (475)
T PLN02167 247 PVGPILSLKDR----------TS---PNLDSSDRDRIMRWLDDQP-ESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRF 312 (475)
T ss_pred Eeccccccccc----------cC---CCCCcchhHHHHHHHhcCC-CCceEEEeecccccCCHHHHHHHHHHHHhCCCcE
Confidence 99999753210 00 0111 12367999999998 8899999999998889999999999999999999
Q ss_pred EEEEcCCCCC--CCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhH
Q 047540 224 LWIIRPDLVT--GETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQAT 301 (388)
Q Consensus 224 iw~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~ 301 (388)
||+++.+... .....+|+++.+++.+++++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.
T Consensus 313 lw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~ 392 (475)
T PLN02167 313 LWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQL 392 (475)
T ss_pred EEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchh
Confidence 9999854211 11234888999999889999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhhceeEEeeec---CCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHH
Q 047540 302 NCRYTCNEWGVGMDITNS---GDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPV 378 (388)
Q Consensus 302 na~~v~~~~G~G~~l~~~---~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l 378 (388)
||+++++++|+|+.+... +++..++.++|+++|+++|.+++ +||+||+++++.+++++.+||||..++++||+.+
T Consensus 393 na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~--~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~i 470 (475)
T PLN02167 393 NAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGED--VPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDL 470 (475)
T ss_pred hHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCCH--HHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 998765889999998321 01135799999999999998652 4999999999999999999999999999999998
Q ss_pred HHhh
Q 047540 379 IKLI 382 (388)
Q Consensus 379 ~~~~ 382 (388)
....
T Consensus 471 ~~~~ 474 (475)
T PLN02167 471 LGDH 474 (475)
T ss_pred HhcC
Confidence 7653
No 18
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=7.5e-54 Score=428.83 Aligned_cols=339 Identities=31% Similarity=0.497 Sum_probs=264.5
Q ss_pred ccHHHHHHHHHhhc-----CCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhhcccc-----------c
Q 047540 26 MLQPFLDLLQKLKS-----SSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTLE-----------E 89 (388)
Q Consensus 26 ~~~~~~~ll~~l~~-----~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~-----------~ 89 (388)
+.+.+++.++++.. .+.+++|||+|.++.|+..+|+++|||++.|++++++.++.+.+++... .
T Consensus 90 ~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (481)
T PLN02554 90 QKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDEKKYDVSELED 169 (481)
T ss_pred HHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhhccccccCccccCC
Confidence 34445555554421 1123589999999999999999999999999999998888765543210 0
Q ss_pred C-C--CCCcc----c--cc-----chhHHHHHHHHHHhhccCCeEEEcChhhhhHHHHHHHHh---hCCCceecCCcccc
Q 047540 90 N-T--TLTSL----I--DL-----NSYATRVAIEAAKNAAKASAVVIHTFDALERQVLDALSA---MFPNLFTIGPLQLL 152 (388)
Q Consensus 90 ~-~--~~pr~----~--~~-----~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~~~~~---~~p~~~~vGpl~~~ 152 (388)
. . .+|.+ . +. .......+.+....+.+++++++|||++||+..+..+.. ..|+++.|||+...
T Consensus 170 ~~~~v~iPgl~~pl~~~dlp~~~~~~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~~~~~v~~vGpl~~~ 249 (481)
T PLN02554 170 SEVELDVPSLTRPYPVKCLPSVLLSKEWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSSGDLPPVYPVGPVLHL 249 (481)
T ss_pred CCceeECCCCCCCCCHHHCCCcccCHHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhcccCCCCEEEeCCCccc
Confidence 0 0 12211 1 11 112233444555667789999999999999998888764 45789999999432
Q ss_pred hhhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCC
Q 047540 153 LNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLV 232 (388)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~ 232 (388)
... .. ....+.+++|.+||+.++ ++++|||||||+..++.+++.+++.+|+.++++|||+++.+..
T Consensus 250 ~~~----------~~---~~~~~~~~~~~~wLd~~~-~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~ 315 (481)
T PLN02554 250 ENS----------GD---DSKDEKQSEILRWLDEQP-PKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASP 315 (481)
T ss_pred ccc----------cc---ccccccchHHHHHHhcCC-CCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCcc
Confidence 210 00 000123467999999998 7899999999998899999999999999999999999985321
Q ss_pred ----------CCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHh
Q 047540 233 ----------TGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATN 302 (388)
Q Consensus 233 ----------~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~n 302 (388)
.+....+|+++.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.|
T Consensus 316 ~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~N 395 (481)
T PLN02554 316 NIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFN 395 (481)
T ss_pred cccccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchhh
Confidence 0111236889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhceeEEeeec-------CCCCCCCHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHH
Q 047540 303 CRYTCNEWGVGMDITNS-------GDDNQVGRNEVEKLVRELME-GEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKL 374 (388)
Q Consensus 303 a~~v~~~~G~G~~l~~~-------~~~~~~~~~~l~~ai~~vl~-~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~ 374 (388)
|+++++++|+|+.+... ++...++.++|+++|+++|+ +++ ||+||+++++.+++++.+||||.+++++|
T Consensus 396 a~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~---~r~~a~~l~~~~~~av~~gGss~~~l~~l 472 (481)
T PLN02554 396 AFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDSD---VRKRVKEMSEKCHVALMDGGSSHTALKKF 472 (481)
T ss_pred HHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCHH---HHHHHHHHHHHHHHHhcCCChHHHHHHHH
Confidence 97655889999998311 01146899999999999997 544 99999999999999999999999999999
Q ss_pred HHHHHHh
Q 047540 375 EQPVIKL 381 (388)
Q Consensus 375 v~~l~~~ 381 (388)
|+.+.++
T Consensus 473 v~~~~~~ 479 (481)
T PLN02554 473 IQDVTKN 479 (481)
T ss_pred HHHHHhh
Confidence 9998765
No 19
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=1.1e-53 Score=421.59 Aligned_cols=347 Identities=20% Similarity=0.336 Sum_probs=263.7
Q ss_pred CCCCCCCCCccccHHH----HHHHHHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchh
Q 047540 1 GLPDPSNENANQDANS----LFESITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAAR 76 (388)
Q Consensus 1 glp~~~~~~~~~d~~~----~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~ 76 (388)
|||+| .+.+++... ++...... +.+.++++++.+ ++||||+| ++.|+..+|+++|||++.|++++++
T Consensus 69 gLp~g--~~~~~~l~~~l~~~~~~~~~~-~~~~l~~~L~~~-----~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~ 139 (442)
T PLN02208 69 GLPAG--AETTSDIPISMDNLLSEALDL-TRDQVEAAVRAL-----RPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSAT 139 (442)
T ss_pred CCCCC--cccccchhHHHHHHHHHHHHH-HHHHHHHHHhhC-----CCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHH
Confidence 56776 444444432 22223444 666677777665 78999999 6899999999999999999999987
Q ss_pred HHHHhhhhcc-cc---cCCCCCc---cc--c-----cchhHHHHHH-HHHHhhccCCeEEEcChhhhhHHHHHHHHhh-C
Q 047540 77 SFKGCMQLRT-LE---ENTTLTS---LI--D-----LNSYATRVAI-EAAKNAAKASAVVIHTFDALERQVLDALSAM-F 140 (388)
Q Consensus 77 ~~~~~~~~~~-~~---~~~~~pr---~~--~-----~~~~~~~~~~-~~~~~~~~~~~~l~~s~~~le~~~l~~~~~~-~ 140 (388)
.+. +.+.+. .. .+++.+. ++ + ........+. ...+...+++++++|||++||+.++++.+.. .
T Consensus 140 ~~~-~~~~~~~~~~~~~pglp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~ 218 (442)
T PLN02208 140 TIA-HTHVPGGKLGVPPPGYPSSKVLFRENDAHALATLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYH 218 (442)
T ss_pred HHH-HHccCccccCCCCCCCCCcccccCHHHcCcccccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcC
Confidence 654 444321 10 0122110 11 1 1111122222 2223456789999999999999999887664 4
Q ss_pred CCceecCCcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCC
Q 047540 141 PNLFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSN 220 (388)
Q Consensus 141 p~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~ 220 (388)
|++++|||++.... .+ ...+++|.+|||.++ +++||||||||+..++.+++.+++.+++..+
T Consensus 219 ~~v~~vGpl~~~~~------------~~-----~~~~~~~~~wLd~~~-~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~ 280 (442)
T PLN02208 219 KKVLLTGPMFPEPD------------TS-----KPLEEQWSHFLSGFP-PKSVVFCSLGSQIILEKDQFQELCLGMELTG 280 (442)
T ss_pred CCEEEEeecccCcC------------CC-----CCCHHHHHHHHhcCC-CCcEEEEeccccccCCHHHHHHHHHHHHhCC
Confidence 78999999974321 00 012468999999998 8899999999999889999999999998899
Q ss_pred CCEEEEEcCCCCC-CCCCCCchhHHHhhhcCcc-cccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccc
Q 047540 221 HPFLWIIRPDLVT-GETADMPSEFEVKAKETGF-IARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGD 298 (388)
Q Consensus 221 ~~~iw~~~~~~~~-~~~~~~~~~~~~~~~~~~~-v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~D 298 (388)
.+|+|+++.+... .....+|++|.+++.++.. +.+|+||.+||+|+++++|||||||||++||+++|||||+||+++|
T Consensus 281 ~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~D 360 (442)
T PLN02208 281 LPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSD 360 (442)
T ss_pred CcEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchh
Confidence 9999999854211 1123588999999865554 4699999999999999999999999999999999999999999999
Q ss_pred hhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCc--hHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHH
Q 047540 299 QATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGE--KGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQ 376 (388)
Q Consensus 299 Q~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~--~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~ 376 (388)
|+.||+++++.+|+|+.+.. ++++.++.++|+++|+++|+++ +|+++|+||+++++.+. + +|||..++++||+
T Consensus 361 Q~~na~~~~~~~g~gv~~~~-~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~---~-~gsS~~~l~~~v~ 435 (442)
T PLN02208 361 QVLFTRLMTEEFEVSVEVSR-EKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV---S-PGLLTGYVDKFVE 435 (442)
T ss_pred hHHHHHHHHHHhceeEEecc-ccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh---c-CCcHHHHHHHHHH
Confidence 99999998777999999921 1112389999999999999864 47899999999999985 3 7899999999999
Q ss_pred HHHH
Q 047540 377 PVIK 380 (388)
Q Consensus 377 ~l~~ 380 (388)
.+.+
T Consensus 436 ~l~~ 439 (442)
T PLN02208 436 ELQE 439 (442)
T ss_pred HHHH
Confidence 9854
No 20
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=1.6e-53 Score=420.86 Aligned_cols=352 Identities=22% Similarity=0.323 Sum_probs=267.6
Q ss_pred CCCCCCCCCccccHHH----HHHHHHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchh
Q 047540 1 GLPDPSNENANQDANS----LFESITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAAR 76 (388)
Q Consensus 1 glp~~~~~~~~~d~~~----~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~ 76 (388)
|||+| .+...++.. ++...... +.+.++++++.. +|||||+|. ++|+..+|+++|||++.|++++++
T Consensus 69 GLP~g--~e~~~~l~~~~~~~~~~a~~~-l~~~l~~~L~~~-----~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~ 139 (446)
T PLN00414 69 GLPFG--AETASDLPNSTKKPIFDAMDL-LRDQIEAKVRAL-----KPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAA 139 (446)
T ss_pred CCCCc--ccccccchhhHHHHHHHHHHH-HHHHHHHHHhcC-----CCeEEEECC-chhHHHHHHHhCCCEEEEecHHHH
Confidence 56777 444444432 22222334 556666666543 789999995 899999999999999999999988
Q ss_pred HHHHhhhhccc---ccCCCCCc----cc--ccc--hh---HHHHHHHHHHhhccCCeEEEcChhhhhHHHHHHHHhhC-C
Q 047540 77 SFKGCMQLRTL---EENTTLTS----LI--DLN--SY---ATRVAIEAAKNAAKASAVVIHTFDALERQVLDALSAMF-P 141 (388)
Q Consensus 77 ~~~~~~~~~~~---~~~~~~pr----~~--~~~--~~---~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~~~~~~~-p 141 (388)
..+.+.+.... ..+++ |. +. +.. .. ....+.+..+.+.+++++++|||++||+.+++..+... +
T Consensus 140 ~~~~~~~~~~~~~~~~pg~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~ 218 (446)
T PLN00414 140 CVAMVLAPRAELGFPPPDY-PLSKVALRGHDANVCSLFANSHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQR 218 (446)
T ss_pred HHHHHhCcHhhcCCCCCCC-CCCcCcCchhhcccchhhcccHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCC
Confidence 87765431110 00111 11 11 000 00 11233344456678899999999999999999988764 5
Q ss_pred CceecCCcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCC
Q 047540 142 NLFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNH 221 (388)
Q Consensus 142 ~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~ 221 (388)
+++.|||+..... .. .. ...+++|.+|||.++ +++||||||||....+.+++.+++.+|+.++.
T Consensus 219 ~v~~VGPl~~~~~-----------~~---~~-~~~~~~~~~WLD~q~-~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~ 282 (446)
T PLN00414 219 KVLLTGPMLPEPQ-----------NK---SG-KPLEDRWNHWLNGFE-PGSVVFCAFGTQFFFEKDQFQEFCLGMELTGL 282 (446)
T ss_pred CeEEEcccCCCcc-----------cc---cC-cccHHHHHHHHhcCC-CCceEEEeecccccCCHHHHHHHHHHHHHcCC
Confidence 7999999964221 00 00 112457999999999 99999999999999999999999999999999
Q ss_pred CEEEEEcCCCCC-CCCCCCchhHHHhhhcCcccc-cccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccch
Q 047540 222 PFLWIIRPDLVT-GETADMPSEFEVKAKETGFIA-RWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQ 299 (388)
Q Consensus 222 ~~iw~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~-~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ 299 (388)
+|+|+++.+... +....+|++|++++++++.++ +|+||.+||+|+++++|||||||||++||+++|||||++|++.||
T Consensus 283 ~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ 362 (446)
T PLN00414 283 PFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQ 362 (446)
T ss_pred CeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccch
Confidence 999999864211 112358999999998888774 999999999999999999999999999999999999999999999
Q ss_pred hHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCc--hHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHH
Q 047540 300 ATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGE--KGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQP 377 (388)
Q Consensus 300 ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~--~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~ 377 (388)
+.||+++++++|+|+.+.. ++++.++.++|+++++++|.++ +|++||+||+++++.+. ++||+|.. +++||+.
T Consensus 363 ~~na~~~~~~~g~g~~~~~-~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~---~~gg~ss~-l~~~v~~ 437 (446)
T PLN00414 363 VLITRLLTEELEVSVKVQR-EDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLV---SPGLLSGY-ADKFVEA 437 (446)
T ss_pred HHHHHHHHHHhCeEEEecc-ccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH---cCCCcHHH-HHHHHHH
Confidence 9999999778999999931 1112589999999999999764 47889999999999975 77884533 8999999
Q ss_pred HHHhhh
Q 047540 378 VIKLIE 383 (388)
Q Consensus 378 l~~~~~ 383 (388)
+.+..+
T Consensus 438 ~~~~~~ 443 (446)
T PLN00414 438 LENEVN 443 (446)
T ss_pred HHHhcc
Confidence 866544
No 21
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=3.2e-53 Score=422.56 Aligned_cols=354 Identities=32% Similarity=0.569 Sum_probs=276.6
Q ss_pred CCCCCCCCccccHHHHHHHHHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHh
Q 047540 2 LPDPSNENANQDANSLFESITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGC 81 (388)
Q Consensus 2 lp~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~ 81 (388)
+|++ .+...++..++..+... +.+.++++++.+. +++||||+|.++.|+..+|+++|||++.|+++++..++.+
T Consensus 73 ~p~~--~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~---~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~ 146 (459)
T PLN02448 73 IPSE--LVRAADFPGFLEAVMTK-MEAPFEQLLDRLE---PPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVF 146 (459)
T ss_pred CCCc--cccccCHHHHHHHHHHH-hHHHHHHHHHhcC---CCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHH
Confidence 4554 34456777788887777 8899999998874 3789999999999999999999999999999998666654
Q ss_pred hhhcccc-------c-----CC---CCCcc---c---------ccchhHHHHHHHHHHhhccCCeEEEcChhhhhHHHHH
Q 047540 82 MQLRTLE-------E-----NT---TLTSL---I---------DLNSYATRVAIEAAKNAAKASAVVIHTFDALERQVLD 134 (388)
Q Consensus 82 ~~~~~~~-------~-----~~---~~pr~---~---------~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~ 134 (388)
.+++... . .. .+|.+ . .......+.+......+.+++++++|||++||+..++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~ 226 (459)
T PLN02448 147 YHFDLLPQNGHFPVELSESGEERVDYIPGLSSTRLSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAID 226 (459)
T ss_pred HHhhhhhhccCCCCccccccCCccccCCCCCCCChHHCchhhcCCchHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHH
Confidence 4432110 0 00 12211 1 1111223344445555667789999999999999999
Q ss_pred HHHhhC-CCceecCCcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHH
Q 047540 135 ALSAMF-PNLFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVA 213 (388)
Q Consensus 135 ~~~~~~-p~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~ 213 (388)
+.+... ++++.|||+...... . ....+......+.+|..||+.++ ++++|||||||....+.+++.+++
T Consensus 227 ~l~~~~~~~~~~iGP~~~~~~~-~--------~~~~~~~~~~~~~~~~~wl~~~~-~~~vvyvsfGs~~~~~~~~~~~~~ 296 (459)
T PLN02448 227 ALKSKFPFPVYPIGPSIPYMEL-K--------DNSSSSNNEDNEPDYFQWLDSQP-EGSVLYVSLGSFLSVSSAQMDEIA 296 (459)
T ss_pred HHHhhcCCceEEecCccccccc-C--------CCccccccccchhHHHHHHcCCC-CCceEEEeecccccCCHHHHHHHH
Confidence 988765 479999999643110 0 00000001112347999999998 889999999999888889999999
Q ss_pred HHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEec
Q 047540 214 MGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICW 293 (388)
Q Consensus 214 ~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~ 293 (388)
.+|+..+++|||+++.+ ..++.++.++|+++.+|+||.+||+|+++++|||||||||++||+++|||||++
T Consensus 297 ~~l~~~~~~~lw~~~~~---------~~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~ 367 (459)
T PLN02448 297 AGLRDSGVRFLWVARGE---------ASRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTF 367 (459)
T ss_pred HHHHhCCCCEEEEEcCc---------hhhHhHhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEec
Confidence 99999999999988643 123555556788999999999999999999999999999999999999999999
Q ss_pred CCccchhHhHHHHhhhhceeEEeeecCC-CCCCCHHHHHHHHHHHHcC--chHHHHHHHHHHHHHHHHHHhCCCCChHHH
Q 047540 294 PFLGDQATNCRYTCNEWGVGMDITNSGD-DNQVGRNEVEKLVRELMEG--EKGMQMRNKASEWKRFAEEAAAPDGSSATN 370 (388)
Q Consensus 294 P~~~DQ~~na~~v~~~~G~G~~l~~~~~-~~~~~~~~l~~ai~~vl~~--~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~ 370 (388)
|+++||+.||+++++.+|+|+.+..... +..++.++|+++++++|.+ ++|++||+||+++++++++++.+||||.++
T Consensus 368 P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~ 447 (459)
T PLN02448 368 PLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTN 447 (459)
T ss_pred cccccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 9999999999999777899999832111 1357999999999999986 357889999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 047540 371 LEKLEQPVIK 380 (388)
Q Consensus 371 ~~~~v~~l~~ 380 (388)
+++||+.+.+
T Consensus 448 l~~~v~~~~~ 457 (459)
T PLN02448 448 LDAFIRDISQ 457 (459)
T ss_pred HHHHHHHHhc
Confidence 9999999875
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=5.6e-43 Score=351.67 Aligned_cols=310 Identities=18% Similarity=0.288 Sum_probs=228.4
Q ss_pred HHHHHHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHh-CCCeEEEccCchhHHHHhhhhc-ccccCCCCC
Q 047540 17 LFESITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQL-GIPIALFFTIAARSFKGCMQLR-TLEENTTLT 94 (388)
Q Consensus 17 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~l-gIP~v~~~~~~~~~~~~~~~~~-~~~~~~~~p 94 (388)
.|+.++.. +.+.++|+. ++ .++|+||+|.+..|+..+|+.+ ++|.|.+++........ .... .+.+++|+|
T Consensus 116 ~~~~~l~~---~~~~~~L~~-~~--~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~~-~~~gg~p~~~syvP 188 (507)
T PHA03392 116 MISDQFDL---PNVKNLIAN-KN--NKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAENF-ETMGAVSRHPVYYP 188 (507)
T ss_pred HHHHHHCC---HHHHHHHhc-CC--CceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhHH-HhhccCCCCCeeeC
Confidence 34444444 555555541 13 3899999999999999999999 99988886654432221 1111 222333433
Q ss_pred --------------ccccc-----------------chhHHHHHHH----HHHhhccCCeEEEcChhhhhHHHHHHHHhh
Q 047540 95 --------------SLIDL-----------------NSYATRVAIE----AAKNAAKASAVVIHTFDALERQVLDALSAM 139 (388)
Q Consensus 95 --------------r~~~~-----------------~~~~~~~~~~----~~~~~~~~~~~l~~s~~~le~~~l~~~~~~ 139 (388)
|+... +....+++.. ..+...+.+++++|+.+.+|++ +|.
T Consensus 189 ~~~~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~~l~lvns~~~~d~~-----rp~ 263 (507)
T PHA03392 189 NLWRSKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRELRNRVQLLFVNVHPVFDNN-----RPV 263 (507)
T ss_pred CcccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCCcEEEEecCccccCC-----CCC
Confidence 22200 0001111111 2234456678999998888777 999
Q ss_pred CCCceecCCcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCcc---CCHHHHHHHHHHH
Q 047540 140 FPNLFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVY---LTKQQLTEVAMGL 216 (388)
Q Consensus 140 ~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~---~~~~~~~~~~~al 216 (388)
+|++++|||++..... .. ..++++.+|++.++ +++|||||||... .+.+.++.+++++
T Consensus 264 ~p~v~~vGgi~~~~~~----------~~-------~l~~~l~~fl~~~~--~g~V~vS~GS~~~~~~~~~~~~~~~l~a~ 324 (507)
T PHA03392 264 PPSVQYLGGLHLHKKP----------PQ-------PLDDYLEEFLNNST--NGVVYVSFGSSIDTNDMDNEFLQMLLRTF 324 (507)
T ss_pred CCCeeeecccccCCCC----------CC-------CCCHHHHHHHhcCC--CcEEEEECCCCCcCCCCCHHHHHHHHHHH
Confidence 9999999999763211 01 12468999999876 5899999999853 5678899999999
Q ss_pred hcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCc
Q 047540 217 VNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFL 296 (388)
Q Consensus 217 ~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~ 296 (388)
++.+.+|||+++.... + ...++|+++.+|+||.+||+|+++++||||||+||++||+++|||+|++|++
T Consensus 325 ~~l~~~viw~~~~~~~-------~----~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~ 393 (507)
T PHA03392 325 KKLPYNVLWKYDGEVE-------A----INLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMM 393 (507)
T ss_pred HhCCCeEEEEECCCcC-------c----ccCCCceEEecCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCC
Confidence 9999999999985421 1 1235699999999999999999999999999999999999999999999999
Q ss_pred cchhHhHHHHhhhhceeEEeeecCCC-CCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHH
Q 047540 297 GDQATNCRYTCNEWGVGMDITNSGDD-NQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLE 375 (388)
Q Consensus 297 ~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v 375 (388)
+||+.||+++ +++|+|+.+ + ..++.++|.++|+++|+|++ |++||+++++.+++. .-+..+.+..-+
T Consensus 394 ~DQ~~Na~rv-~~~G~G~~l-----~~~~~t~~~l~~ai~~vl~~~~---y~~~a~~ls~~~~~~---p~~~~~~av~~i 461 (507)
T PHA03392 394 GDQFYNTNKY-VELGIGRAL-----DTVTVSAAQLVLAIVDVIENPK---YRKNLKELRHLIRHQ---PMTPLHKAIWYT 461 (507)
T ss_pred ccHHHHHHHH-HHcCcEEEe-----ccCCcCHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHhC---CCCHHHHHHHHH
Confidence 9999999999 678999999 6 67899999999999999988 999999999999952 323333333444
Q ss_pred HHHHH
Q 047540 376 QPVIK 380 (388)
Q Consensus 376 ~~l~~ 380 (388)
+++.+
T Consensus 462 E~v~r 466 (507)
T PHA03392 462 EHVIR 466 (507)
T ss_pred HHHHh
Confidence 44443
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=2.7e-44 Score=364.41 Aligned_cols=272 Identities=28% Similarity=0.462 Sum_probs=188.7
Q ss_pred CccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhhcccccCCCCC--------------cccccchhH-HHHH
Q 047540 43 SVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTLEENTTLT--------------SLIDLNSYA-TRVA 107 (388)
Q Consensus 43 ~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p--------------r~~~~~~~~-~~~~ 107 (388)
++|++|+|.+.+|+..+|+.++||.+.+.+..............+.++++.| |+....... .+..
T Consensus 119 ~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~~~~~~~~~~~g~p~~psyvP~~~s~~~~~msf~~Ri~N~l~~~~~~~~ 198 (500)
T PF00201_consen 119 KFDLVISDAFDPCGLALAHYLGIPVIIISSSTPMYDLSSFSGGVPSPPSYVPSMFSDFSDRMSFWQRIKNFLFYLYFRFI 198 (500)
T ss_dssp HHCT-EEEEEESSHHHHHHHHHHTHHHHHHCCSCSCCTCCTSCCCTSTTSTTCBCCCSGTTSSSST--TTSHHHHHHHHH
T ss_pred ccccceEeeccchhHHHHHHhcCCeEEEecccccchhhhhccCCCCChHHhccccccCCCccchhhhhhhhhhhhhhccc
Confidence 8999999999999999999999999876443322111101001111222222 222111000 0111
Q ss_pred HH-------------------HHHhhccCCeEEEcChhhhhHHHHHHHHhhCCCceecCCcccchhhccccCCCCCCCCC
Q 047540 108 IE-------------------AAKNAAKASAVVIHTFDALERQVLDALSAMFPNLFTIGPLQLLLNQINEQGGNSLSSTG 168 (388)
Q Consensus 108 ~~-------------------~~~~~~~~~~~l~~s~~~le~~~l~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~ 168 (388)
.. ..+.+.+.+.+++|+.+.++. ++|..|++++|||++..+.. +
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ns~~~ld~-----prp~~p~v~~vGgl~~~~~~----------~-- 261 (500)
T PF00201_consen 199 FRYFFSPQDKLYKKYFGFPFSFRELLSNASLVLINSHPSLDF-----PRPLLPNVVEVGGLHIKPAK----------P-- 261 (500)
T ss_dssp HHHGGGS-TTS-EEESS-GGGCHHHHHHHHHCCSSTEEE---------HHHHCTSTTGCGC-S--------------T--
T ss_pred cccchhhHHHHHhhhcccccccHHHHHHHHHHhhhccccCcC-----CcchhhcccccCcccccccc----------c--
Confidence 00 012223344566677655554 49999999999999764311 1
Q ss_pred CCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCH-HHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhh
Q 047540 169 YKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTK-QQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKA 247 (388)
Q Consensus 169 ~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~ 247 (388)
.+.++..|++... ++++|||||||+....+ +..+.+++++++++++|||++++. .+. .+
T Consensus 262 -------l~~~~~~~~~~~~-~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~--------~~~----~l 321 (500)
T PF00201_consen 262 -------LPEELWNFLDSSG-KKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGE--------PPE----NL 321 (500)
T ss_dssp -------CHHHHHHHTSTTT-TTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCS--------HGC----HH
T ss_pred -------cccccchhhhccC-CCCEEEEecCcccchhHHHHHHHHHHHHhhCCCccccccccc--------ccc----cc
Confidence 2467889999854 57999999999875434 558889999999999999999853 112 24
Q ss_pred hcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC-CCCC
Q 047540 248 KETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD-NQVG 326 (388)
Q Consensus 248 ~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~ 326 (388)
++|+++.+|+||.+||+||++++||||||+||++||+++|||||++|+++||+.||+++ ++.|+|+.+ + ..++
T Consensus 322 ~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~-~~~G~g~~l-----~~~~~~ 395 (500)
T PF00201_consen 322 PKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARV-EEKGVGVVL-----DKNDLT 395 (500)
T ss_dssp HTTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHH-HHTTSEEEE-----GGGC-S
T ss_pred cceEEEeccccchhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCccceEE-EEEeeEEEE-----EecCCc
Confidence 67999999999999999999999999999999999999999999999999999999999 678999999 6 7899
Q ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHH
Q 047540 327 RNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEA 360 (388)
Q Consensus 327 ~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~ 360 (388)
.+++.++|+++|+|++ |++||+++++.+++.
T Consensus 396 ~~~l~~ai~~vl~~~~---y~~~a~~ls~~~~~~ 426 (500)
T PF00201_consen 396 EEELRAAIREVLENPS---YKENAKRLSSLFRDR 426 (500)
T ss_dssp HHHHHHHHHHHHHSHH---HHHHHHHHHHTTT--
T ss_pred HHHHHHHHHHHHhhhH---HHHHHHHHHHHHhcC
Confidence 9999999999999998 999999999999964
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=8.7e-34 Score=287.22 Aligned_cols=280 Identities=29% Similarity=0.478 Sum_probs=193.0
Q ss_pred CccEEEEcCCcchHHHHHHHhC-CCeEEEccCchhHHHHhhhhccc-ccCCCC----------CcccccchhH-HHHHH-
Q 047540 43 SVSCIISDGFMPFTVTAAQQLG-IPIALFFTIAARSFKGCMQLRTL-EENTTL----------TSLIDLNSYA-TRVAI- 108 (388)
Q Consensus 43 ~~D~iI~D~~~~~~~~~A~~lg-IP~v~~~~~~~~~~~~~~~~~~~-~~~~~~----------pr~~~~~~~~-~~~~~- 108 (388)
++|++|+|.+..|...+|.... |+..++++..+.......+.+.. .+.... .|........ .....
T Consensus 114 ~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 193 (496)
T KOG1192|consen 114 KFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSPLSYVPSPFSLSSGDDMSFPERVPNLIKKDLPSFLFS 193 (496)
T ss_pred CccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCcccccCcccCccccccCcHHHHHHHHHHHHHHHHHHH
Confidence 4999999998778887787775 99888887776654432221110 110000 0111000000 00000
Q ss_pred --------HHH---------------HhhccCCeEEEcChhhhhHHHHHHHHhhCCCceecCCcccchhhccccCCCCCC
Q 047540 109 --------EAA---------------KNAAKASAVVIHTFDALERQVLDALSAMFPNLFTIGPLQLLLNQINEQGGNSLS 165 (388)
Q Consensus 109 --------~~~---------------~~~~~~~~~l~~s~~~le~~~l~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~ 165 (388)
... +...+.+..++|+...++.. +++..|++++|||++....
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln~~~~~~~~----~~~~~~~v~~IG~l~~~~~----------- 258 (496)
T KOG1192|consen 194 LSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLNSNPLLDFE----PRPLLPKVIPIGPLHVKDS----------- 258 (496)
T ss_pred HhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEccCcccCCC----CCCCCCCceEECcEEecCc-----------
Confidence 000 11223334444444333331 2445689999999986521
Q ss_pred CCCCCCCCcccchHHHHHhcCCCCCC--CcEEEeeCCCc---cCCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCCCCCCC
Q 047540 166 STGYKYNLWKEETECLQWLDSKELPN--SVVYVNFGSSV---YLTKQQLTEVAMGLVNS-NHPFLWIIRPDLVTGETADM 239 (388)
Q Consensus 166 ~~~~~~~~~~~~~~l~~~l~~~~~~~--~~v~vs~Gs~~---~~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~ 239 (388)
.. ....+++|++..+ .. ++|||||||++ .++.++..+++.++++. +++|+|++..+.... +
T Consensus 259 -~~-------~~~~~~~wl~~~~-~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~~~----~ 325 (496)
T KOG1192|consen 259 -KQ-------KSPLPLEWLDILD-ESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDDSIY----F 325 (496)
T ss_pred -cc-------cccccHHHHHHHh-hccCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCcchh----h
Confidence 10 0113567777776 44 99999999998 78999999999999999 889999999653211 1
Q ss_pred chhHHHhhhcCcccccccChHhh-hcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeee
Q 047540 240 PSEFEVKAKETGFIARWCPQEEV-LNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITN 318 (388)
Q Consensus 240 ~~~~~~~~~~~~~v~~~~pq~~~-L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~ 318 (388)
++++.++.++|+...+|+||.++ |+|+++++|||||||||++|++++|||||++|+++||+.||++++++.++++..
T Consensus 326 ~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~-- 403 (496)
T KOG1192|consen 326 PEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLD-- 403 (496)
T ss_pred hhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEe--
Confidence 22222212346777899999998 699999999999999999999999999999999999999999996665555555
Q ss_pred cCCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH
Q 047540 319 SGDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAE 358 (388)
Q Consensus 319 ~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~ 358 (388)
..+++...+..++.+++++++ |+++++++++..+
T Consensus 404 ---~~~~~~~~~~~~~~~il~~~~---y~~~~~~l~~~~~ 437 (496)
T KOG1192|consen 404 ---KRDLVSEELLEAIKEILENEE---YKEAAKRLSEILR 437 (496)
T ss_pred ---hhhcCcHHHHHHHHHHHcChH---HHHHHHHHHHHHH
Confidence 455666669999999999998 9999999999988
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=1.1e-31 Score=264.04 Aligned_cols=291 Identities=16% Similarity=0.199 Sum_probs=200.6
Q ss_pred cHHHHHHHHHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhhcccc-c--
Q 047540 13 DANSLFESITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTLE-E-- 89 (388)
Q Consensus 13 d~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~-~-- 89 (388)
++..+++.+... +...+..+++.+++. +||+||+|.+++++..+|+.+|||++.+++.+... ..++... +
T Consensus 65 ~~~~~~~~~~~~-~~~~~~~l~~~~~~~--~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~----~~~~~~~~~~~ 137 (392)
T TIGR01426 65 EPIDIIEKLLDE-AEDVLPQLEEAYKGD--RPDLIVYDIASWTGRLLARKWDVPVISSFPTFAAN----EEFEEMVSPAG 137 (392)
T ss_pred chHHHHHHHHHH-HHHHHHHHHHHhcCC--CCCEEEECCccHHHHHHHHHhCCCEEEEehhhccc----ccccccccccc
Confidence 344556666555 555666666655554 89999999988999999999999999885443211 0011100 0
Q ss_pred CCCCC--ccc-ccchhHHHHHHHHHHhh------------ccCCeEEEcChhhhhHHHHHHHHhhC-CCceecCCcccch
Q 047540 90 NTTLT--SLI-DLNSYATRVAIEAAKNA------------AKASAVVIHTFDALERQVLDALSAMF-PNLFTIGPLQLLL 153 (388)
Q Consensus 90 ~~~~p--r~~-~~~~~~~~~~~~~~~~~------------~~~~~~l~~s~~~le~~~l~~~~~~~-p~~~~vGpl~~~~ 153 (388)
..... +.. .......+.+......+ ...+..+..+.+.|++ ..+.+ ++++++||+....
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~-----~~~~~~~~~~~~Gp~~~~~ 212 (392)
T TIGR01426 138 EGSAEEGAIAERGLAEYVARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQP-----AGETFDDSFTFVGPCIGDR 212 (392)
T ss_pred hhhhhhhccccchhHHHHHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCC-----CccccCCCeEEECCCCCCc
Confidence 00000 000 00011111111111111 1112233334333333 23333 5799999986422
Q ss_pred hhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCC
Q 047540 154 NQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVT 233 (388)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~ 233 (388)
. . ...|..... ++++|||++||+.......+..+++++.+.+.+++|..+....
T Consensus 213 ~-----------~-------------~~~~~~~~~-~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~- 266 (392)
T TIGR01426 213 K-----------E-------------DGSWERPGD-GRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVD- 266 (392)
T ss_pred c-----------c-------------cCCCCCCCC-CCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCC-
Confidence 1 0 113666555 6899999999986666668888999999999999998875421
Q ss_pred CCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhcee
Q 047540 234 GETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVG 313 (388)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G 313 (388)
.......++|+.+.+|+||.++|.++++ ||||||+||++|++++|+|+|++|...||+.||+++ +++|+|
T Consensus 267 -------~~~~~~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l-~~~g~g 336 (392)
T TIGR01426 267 -------PADLGELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRI-AELGLG 336 (392)
T ss_pred -------hhHhccCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHH-HHCCCE
Confidence 1111224568899999999999999987 999999999999999999999999999999999999 678999
Q ss_pred EEeeecCCC-CCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH
Q 047540 314 MDITNSGDD-NQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEE 359 (388)
Q Consensus 314 ~~l~~~~~~-~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~ 359 (388)
+.+ . ..++.++|.++|+++|+|++ |+++++++++.++.
T Consensus 337 ~~l-----~~~~~~~~~l~~ai~~~l~~~~---~~~~~~~l~~~~~~ 375 (392)
T TIGR01426 337 RHL-----PPEEVTAEKLREAVLAVLSDPR---YAERLRKMRAEIRE 375 (392)
T ss_pred EEe-----ccccCCHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHH
Confidence 999 5 67899999999999999988 99999999999984
No 26
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.97 E-value=1.3e-29 Score=249.83 Aligned_cols=286 Identities=17% Similarity=0.172 Sum_probs=187.2
Q ss_pred HHHHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhhcccccCCCCCccc-
Q 047540 19 ESITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTLEENTTLTSLI- 97 (388)
Q Consensus 19 ~~~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~pr~~- 97 (388)
..+... ....+.++++.+++. +||+||+|.+.+++..+|+++|||++.+++++........ +.. .........
T Consensus 83 ~~~~~~-~~~~~~~~~~~~~~~--~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~--~~~-~~~~~~~~~~ 156 (401)
T cd03784 83 RLLRRE-AEAMLDDLVAAARDW--GPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSAFP--PPL-GRANLRLYAL 156 (401)
T ss_pred HHHHHH-HHHHHHHHHHHhccc--CCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCccccCC--Ccc-chHHHHHHHH
Confidence 334444 555666666665444 9999999998899999999999999999877644322110 000 000000000
Q ss_pred -c---cchhHHHHHHHHHHhhcc---------CCeEEEcChhhhhHHHHHHHHhhCC-CceecC-CcccchhhccccCCC
Q 047540 98 -D---LNSYATRVAIEAAKNAAK---------ASAVVIHTFDALERQVLDALSAMFP-NLFTIG-PLQLLLNQINEQGGN 162 (388)
Q Consensus 98 -~---~~~~~~~~~~~~~~~~~~---------~~~~l~~s~~~le~~~l~~~~~~~p-~~~~vG-pl~~~~~~~~~~~~~ 162 (388)
. ...............+.- .+..+....+.+.+ +++.++ +..++| ++...+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~--------- 222 (401)
T cd03784 157 LEAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVLP-----PPPDWPRFDLVTGYGFRDVP--------- 222 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCcccCC-----CCCCccccCcEeCCCCCCCC---------
Confidence 0 000001111111111110 11111111111111 123333 455554 332111
Q ss_pred CCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCH-HHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCch
Q 047540 163 SLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTK-QQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPS 241 (388)
Q Consensus 163 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~ 241 (388)
.+ ...+.++..|++..+ ++|||++||+..... ..+..+++++...+.++||+.+......
T Consensus 223 ----~~-----~~~~~~~~~~~~~~~---~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~~------- 283 (401)
T cd03784 223 ----YN-----GPPPPELWLFLAAGR---PPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGLGA------- 283 (401)
T ss_pred ----CC-----CCCCHHHHHHHhCCC---CcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCccccc-------
Confidence 00 112456778887654 999999999876444 5677899999999999999988643110
Q ss_pred hHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCC
Q 047540 242 EFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGD 321 (388)
Q Consensus 242 ~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 321 (388)
...++|+++.+|+||..+|.++++ ||||||+||++|++++|||+|++|+..||+.||+++ +++|+|+.+
T Consensus 284 ---~~~~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~-~~~G~g~~l----- 352 (401)
T cd03784 284 ---EDLPDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARV-AELGAGPAL----- 352 (401)
T ss_pred ---cCCCCceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHH-HHCCCCCCC-----
Confidence 123568999999999999999888 999999999999999999999999999999999999 778999999
Q ss_pred C-CCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH
Q 047540 322 D-NQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAE 358 (388)
Q Consensus 322 ~-~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~ 358 (388)
+ ..++.++|.++|+++++++ +++++.++.+.++
T Consensus 353 ~~~~~~~~~l~~al~~~l~~~----~~~~~~~~~~~~~ 386 (401)
T cd03784 353 DPRELTAERLAAALRRLLDPP----SRRRAAALLRRIR 386 (401)
T ss_pred CcccCCHHHHHHHHHHHhCHH----HHHHHHHHHHHHH
Confidence 5 5589999999999999864 5666777776665
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.95 E-value=2e-27 Score=233.07 Aligned_cols=163 Identities=23% Similarity=0.339 Sum_probs=141.7
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcc
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVG 269 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~ 269 (388)
++++||+|+||.... .+.++.+++++..++.+||...+. ... +. ...++|+.+.+|+||..+|.++++
T Consensus 236 d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~-~~~-~~--------~~~p~n~~v~~~~p~~~~l~~ad~- 303 (406)
T COG1819 236 DRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGG-ARD-TL--------VNVPDNVIVADYVPQLELLPRADA- 303 (406)
T ss_pred CCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEeccc-ccc-cc--------ccCCCceEEecCCCHHHHhhhcCE-
Confidence 469999999999866 788999999999999999999875 111 11 123569999999999999999999
Q ss_pred eeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC-CCCCHHHHHHHHHHHHcCchHHHHHH
Q 047540 270 GFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD-NQVGRNEVEKLVRELMEGEKGMQMRN 348 (388)
Q Consensus 270 ~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~l~~ai~~vl~~~~~~~~~~ 348 (388)
||||||+||++|||++|||+|++|...||+.||.++ ++.|+|+.+ . ..++.+.++++|+++|+|.+ |++
T Consensus 304 -vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rv-e~~G~G~~l-----~~~~l~~~~l~~av~~vL~~~~---~~~ 373 (406)
T COG1819 304 -VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERV-EELGAGIAL-----PFEELTEERLRAAVNEVLADDS---YRR 373 (406)
T ss_pred -EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHH-HHcCCceec-----CcccCCHHHHHHHHHHHhcCHH---HHH
Confidence 999999999999999999999999999999999999 889999999 6 58999999999999999998 999
Q ss_pred HHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q 047540 349 KASEWKRFAEEAAAPDGSSATNLEKLEQPVI 379 (388)
Q Consensus 349 ~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~ 379 (388)
+++++++.++. .+| .+.+.+.+....
T Consensus 374 ~~~~~~~~~~~---~~g--~~~~a~~le~~~ 399 (406)
T COG1819 374 AAERLAEEFKE---EDG--PAKAADLLEEFA 399 (406)
T ss_pred HHHHHHHHhhh---ccc--HHHHHHHHHHHH
Confidence 99999999994 455 455555555543
No 28
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.74 E-value=5.2e-17 Score=155.11 Aligned_cols=229 Identities=17% Similarity=0.208 Sum_probs=147.2
Q ss_pred HHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhhcccccCCCCCcccccchhHHHHH
Q 047540 28 QPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTLEENTTLTSLIDLNSYATRVA 107 (388)
Q Consensus 28 ~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~pr~~~~~~~~~~~~ 107 (388)
..++++++.+++. +||+||+|. .+.+..+|+..|||++.+......... ..... .........
T Consensus 81 ~~~~~~~~~l~~~--~pDlVIsD~-~~~~~~aa~~~giP~i~i~~~~~~~~~---~~~~~-----------~~~~~~~~~ 143 (318)
T PF13528_consen 81 RRIRREIRWLREF--RPDLVISDF-YPLAALAARRAGIPVIVISNQYWFLHP---NFWLP-----------WDQDFGRLI 143 (318)
T ss_pred HHHHHHHHHHHhc--CCCEEEEcC-hHHHHHHHHhcCCCEEEEEehHHcccc---cCCcc-----------hhhhHHHHH
Confidence 4445555555555 999999995 666788999999999988655432210 00000 000111111
Q ss_pred HHHHH-h-hccCCeEEEcChhhhhHHHHHHHHhhCCCceecCCcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhc
Q 047540 108 IEAAK-N-AAKASAVVIHTFDALERQVLDALSAMFPNLFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLD 185 (388)
Q Consensus 108 ~~~~~-~-~~~~~~~l~~s~~~le~~~l~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 185 (388)
..... . ...++..+.-+++. + .+...+..++||+..... .. ..
T Consensus 144 ~~~~~~~~~~~~~~~l~~~~~~---~-----~~~~~~~~~~~p~~~~~~------------~~--------------~~- 188 (318)
T PF13528_consen 144 ERYIDRYHFPPADRRLALSFYP---P-----LPPFFRVPFVGPIIRPEI------------RE--------------LP- 188 (318)
T ss_pred HHhhhhccCCcccceecCCccc---c-----ccccccccccCchhcccc------------cc--------------cC-
Confidence 11111 1 23444444444431 1 111224667888753211 00 00
Q ss_pred CCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCC-CCEEEEEcCCCCCCCCCCCchhHHHhhhcCccccccc-C-hHhh
Q 047540 186 SKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSN-HPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWC-P-QEEV 262 (388)
Q Consensus 186 ~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-p-q~~~ 262 (388)
.. +++.|+|++|..... .++++++..+ ..|++. +.... +...+|+.+..|. + -.++
T Consensus 189 -~~-~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~~------------~~~~~ni~~~~~~~~~~~~~ 247 (318)
T PF13528_consen 189 -PE-DEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNAA------------DPRPGNIHVRPFSTPDFAEL 247 (318)
T ss_pred -CC-CCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCcc------------cccCCCEEEeecChHHHHHH
Confidence 11 357899999986532 5566666666 566655 53310 0114688888876 3 3559
Q ss_pred hcCCCcceeeeccCchhHHHHHhhCCcEEecCC--ccchhHhHHHHhhhhceeEEeeecCCC-CCCCHHHHHHHHHHH
Q 047540 263 LNHPAVGGFFTHSGWNSTIESLCAGVPMICWPF--LGDQATNCRYTCNEWGVGMDITNSGDD-NQVGRNEVEKLVREL 337 (388)
Q Consensus 263 L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~--~~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~l~~ai~~v 337 (388)
|..+++ +|||||.||++|++++|+|+|++|. +.||..||+++ +++|+|+.+ + .+++.+.|+++|+++
T Consensus 248 m~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l-~~~G~~~~~-----~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 248 MAAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKL-EELGLGIVL-----SQEDLTPERLAEFLERL 317 (318)
T ss_pred HHhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHH-HHCCCeEEc-----ccccCCHHHHHHHHhcC
Confidence 988888 9999999999999999999999999 78999999999 889999999 6 789999999998763
No 29
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.73 E-value=4.8e-16 Score=150.46 Aligned_cols=149 Identities=18% Similarity=0.164 Sum_probs=110.2
Q ss_pred hcCCCCCCCcEEEeeCCCccCCHH-HHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCccccccc-ChH-
Q 047540 184 LDSKELPNSVVYVNFGSSVYLTKQ-QLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWC-PQE- 260 (388)
Q Consensus 184 l~~~~~~~~~v~vs~Gs~~~~~~~-~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-pq~- 260 (388)
+...+ ++++|+|..||++....+ .+.+++..+.. +..++|.+|.+.. .. ...+ ..+..+.+|+ +++
T Consensus 179 ~~l~~-~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~~-------~~-~~~~-~~~~~~~~f~~~~m~ 247 (352)
T PRK12446 179 LGFSR-KKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGNL-------DD-SLQN-KEGYRQFEYVHGELP 247 (352)
T ss_pred cCCCC-CCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCchH-------HH-HHhh-cCCcEEecchhhhHH
Confidence 33344 568999999999875553 34555555532 4788999886521 11 1111 1244556787 555
Q ss_pred hhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCc-----cchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHH
Q 047540 261 EVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFL-----GDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVR 335 (388)
Q Consensus 261 ~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~-----~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~ 335 (388)
+++.++++ +|||||.+|+.|++++|+|+|++|+. .||..||+.+ ++.|+|..+. +.+++.+.+.+++.
T Consensus 248 ~~~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l-~~~g~~~~l~----~~~~~~~~l~~~l~ 320 (352)
T PRK12446 248 DILAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESF-ERQGYASVLY----EEDVTVNSLIKHVE 320 (352)
T ss_pred HHHHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHH-HHCCCEEEcc----hhcCCHHHHHHHHH
Confidence 48999998 99999999999999999999999984 4899999999 6689999992 37899999999999
Q ss_pred HHHcCchHHHHHHHHHH
Q 047540 336 ELMEGEKGMQMRNKASE 352 (388)
Q Consensus 336 ~vl~~~~~~~~~~~a~~ 352 (388)
++++|++ .|++++++
T Consensus 321 ~ll~~~~--~~~~~~~~ 335 (352)
T PRK12446 321 ELSHNNE--KYKTALKK 335 (352)
T ss_pred HHHcCHH--HHHHHHHH
Confidence 9998864 26555444
No 30
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.68 E-value=1.8e-15 Score=144.93 Aligned_cols=124 Identities=19% Similarity=0.304 Sum_probs=88.4
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccC-h-HhhhcCCCc
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCP-Q-EEVLNHPAV 268 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p-q-~~~L~~~~~ 268 (388)
.+.|+|.+|+... ..+++++.+.+. +.++++.... ... ..++|+.+.+|.| + .+.|..+++
T Consensus 188 ~~~iLv~~g~~~~------~~l~~~l~~~~~-~~~i~~~~~~------~~~----~~~~~v~~~~~~~~~~~~~l~~ad~ 250 (321)
T TIGR00661 188 EDYILVYIGFEYR------YKILELLGKIAN-VKFVCYSYEV------AKN----SYNENVEIRRITTDNFKELIKNAEL 250 (321)
T ss_pred CCcEEEECCcCCH------HHHHHHHHhCCC-eEEEEeCCCC------Ccc----ccCCCEEEEECChHHHHHHHHhCCE
Confidence 4778888888532 344666766553 2333332211 111 2245888889987 3 357788887
Q ss_pred ceeeeccCchhHHHHHhhCCcEEecCCcc--chhHhHHHHhhhhceeEEeeecCCC-CCCCHHHHHHHHHHHHcCch
Q 047540 269 GGFFTHSGWNSTIESLCAGVPMICWPFLG--DQATNCRYTCNEWGVGMDITNSGDD-NQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 269 ~~~IthgG~~s~~eal~~GvP~i~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~l~~ai~~vl~~~~ 342 (388)
||||||++|++|++++|+|+|++|... ||..||+.+ ++.|+|+.+ + .++ ++.+++.++++++.
T Consensus 251 --vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l-~~~g~~~~l-----~~~~~---~~~~~~~~~~~~~~ 316 (321)
T TIGR00661 251 --VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKL-EDLGCGIAL-----EYKEL---RLLEAILDIRNMKR 316 (321)
T ss_pred --EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHH-HHCCCEEEc-----ChhhH---HHHHHHHhcccccc
Confidence 999999999999999999999999854 899999999 678999999 4 334 56666767777765
No 31
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.65 E-value=2.4e-14 Score=137.73 Aligned_cols=137 Identities=17% Similarity=0.224 Sum_probs=106.3
Q ss_pred CCCcEEEeeCCCccCCHH-HHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhh-cC-cccccccChHh-hhcC
Q 047540 190 PNSVVYVNFGSSVYLTKQ-QLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAK-ET-GFIARWCPQEE-VLNH 265 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~-~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~-~~-~~v~~~~pq~~-~L~~ 265 (388)
++++|+|..||++....+ .+..++..+.+ ...+++..+.+. .+....... .+ ..+.+|.+++. +|+.
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~--------~~~~~~~~~~~~~~~v~~f~~dm~~~~~~ 252 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKND--------LEELKSAYNELGVVRVLPFIDDMAALLAA 252 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcch--------HHHHHHHHhhcCcEEEeeHHhhHHHHHHh
Confidence 468999999999865443 34445555544 578888887542 122222222 22 66788998876 9999
Q ss_pred CCcceeeeccCchhHHHHHhhCCcEEecCC-c---cchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCc
Q 047540 266 PAVGGFFTHSGWNSTIESLCAGVPMICWPF-L---GDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGE 341 (388)
Q Consensus 266 ~~~~~~IthgG~~s~~eal~~GvP~i~~P~-~---~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~ 341 (388)
+++ +||++|.+|+.|.+++|+|+|.+|+ . .||..||+.+ ++.|+|..++ +.+++.+.+.+.|.+++.++
T Consensus 253 ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l-~~~gaa~~i~----~~~lt~~~l~~~i~~l~~~~ 325 (357)
T COG0707 253 ADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFL-EKAGAALVIR----QSELTPEKLAELILRLLSNP 325 (357)
T ss_pred ccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHH-HhCCCEEEec----cccCCHHHHHHHHHHHhcCH
Confidence 998 9999999999999999999999998 3 3888999999 6789999993 37899999999999999885
Q ss_pred h
Q 047540 342 K 342 (388)
Q Consensus 342 ~ 342 (388)
+
T Consensus 326 ~ 326 (357)
T COG0707 326 E 326 (357)
T ss_pred H
Confidence 4
No 32
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.46 E-value=2.9e-15 Score=129.68 Aligned_cols=138 Identities=15% Similarity=0.202 Sum_probs=96.0
Q ss_pred cEEEeeCCCccCCHH-HHHHHHHHHhc--CCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChH-hhhcCCCc
Q 047540 193 VVYVNFGSSVYLTKQ-QLTEVAMGLVN--SNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQE-EVLNHPAV 268 (388)
Q Consensus 193 ~v~vs~Gs~~~~~~~-~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~-~~L~~~~~ 268 (388)
+|+|++||.+..... .+..+...+.. ....|++.+|........ .. ..+...++.+.+|.+++ .++..+++
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~~~----~~-~~~~~~~v~~~~~~~~m~~~m~~aDl 75 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYEELK----IK-VENFNPNVKVFGFVDNMAELMAAADL 75 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECHHHC----CC-HCCTTCCCEEECSSSSHHHHHHHHSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHHHHH----HH-HhccCCcEEEEechhhHHHHHHHcCE
Confidence 589999997643222 23334444333 257888888866321100 00 00112467889999955 59999998
Q ss_pred ceeeeccCchhHHHHHhhCCcEEecCCcc----chhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCch
Q 047540 269 GGFFTHSGWNSTIESLCAGVPMICWPFLG----DQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 269 ~~~IthgG~~s~~eal~~GvP~i~~P~~~----DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~ 342 (388)
+|||||.+|+.|++.+|+|+|++|... +|..||..+ ++.|+|+.+. ....+.+.|.++|.+++.++.
T Consensus 76 --vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~-~~~g~~~~~~----~~~~~~~~L~~~i~~l~~~~~ 146 (167)
T PF04101_consen 76 --VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKEL-AKKGAAIMLD----ESELNPEELAEAIEELLSDPE 146 (167)
T ss_dssp --EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHH-HHCCCCCCSE----CCC-SCCCHHHHHHCHCCCHH
T ss_pred --EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHH-HHcCCccccC----cccCCHHHHHHHHHHHHcCcH
Confidence 999999999999999999999999987 999999999 6789999993 356778999999999998875
No 33
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.36 E-value=1.5e-10 Score=112.34 Aligned_cols=135 Identities=16% Similarity=0.163 Sum_probs=94.1
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCCC--CEEEEEcCCCCCCCCCCCchhHHHh--hhcCcccccccCh-HhhhcC
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSNH--PFLWIIRPDLVTGETADMPSEFEVK--AKETGFIARWCPQ-EEVLNH 265 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~--~~iw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~pq-~~~L~~ 265 (388)
.++|++..|+... ......+.+++.+... .++|.+|.... +.+.+. ..-++.+.+|+++ .+++..
T Consensus 183 ~~~i~~~gg~~~~--~~~~~~l~~a~~~~~~~~~~~~~~G~g~~--------~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 252 (357)
T PRK00726 183 KPTLLVVGGSQGA--RVLNEAVPEALALLPEALQVIHQTGKGDL--------EEVRAAYAAGINAEVVPFIDDMAAAYAA 252 (357)
T ss_pred CeEEEEECCcHhH--HHHHHHHHHHHHHhhhCcEEEEEcCCCcH--------HHHHHHhhcCCcEEEeehHhhHHHHHHh
Confidence 4667766665322 1122223355544332 45566665421 222211 1223566888854 469999
Q ss_pred CCcceeeeccCchhHHHHHhhCCcEEecCC----ccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCc
Q 047540 266 PAVGGFFTHSGWNSTIESLCAGVPMICWPF----LGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGE 341 (388)
Q Consensus 266 ~~~~~~IthgG~~s~~eal~~GvP~i~~P~----~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~ 341 (388)
+++ +|+|+|.++++|++++|+|+|++|. .++|..|+..+ .+.|+|..+. ..+++.+.+.++|.++++|+
T Consensus 253 ~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i-~~~~~g~~~~----~~~~~~~~l~~~i~~ll~~~ 325 (357)
T PRK00726 253 ADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARAL-VDAGAALLIP----QSDLTPEKLAEKLLELLSDP 325 (357)
T ss_pred CCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHH-HHCCCEEEEE----cccCCHHHHHHHHHHHHcCH
Confidence 999 9999999999999999999999997 46899999998 6689999992 25678999999999999997
Q ss_pred h
Q 047540 342 K 342 (388)
Q Consensus 342 ~ 342 (388)
+
T Consensus 326 ~ 326 (357)
T PRK00726 326 E 326 (357)
T ss_pred H
Confidence 6
No 34
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.35 E-value=8e-10 Score=108.47 Aligned_cols=146 Identities=18% Similarity=0.172 Sum_probs=97.3
Q ss_pred HHHHHhcCCCCCCCcEEEeeCCCccCCHHH-HHHHHHHHh-----cCCCCEEEEEcCCCCCCCCCCCchhHHHh-hhcCc
Q 047540 179 ECLQWLDSKELPNSVVYVNFGSSVYLTKQQ-LTEVAMGLV-----NSNHPFLWIIRPDLVTGETADMPSEFEVK-AKETG 251 (388)
Q Consensus 179 ~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~-~~~~~~al~-----~~~~~~iw~~~~~~~~~~~~~~~~~~~~~-~~~~~ 251 (388)
++.+-+...+ ++++|.+..|+.+...... +..+...+. ..+..+++..|.+.. +-+.+.+. ...++
T Consensus 195 ~~r~~~gl~~-~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~------~~~~L~~~~~~~~v 267 (382)
T PLN02605 195 ELRRELGMDE-DLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK------LQSKLESRDWKIPV 267 (382)
T ss_pred HHHHHcCCCC-CCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH------HHHHHHhhcccCCe
Confidence 3444444444 5678888777765433322 233322221 123556677764410 11112111 12356
Q ss_pred ccccccChHh-hhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchh-HhHHHHhhhhceeEEeeecCCCCCCCHHH
Q 047540 252 FIARWCPQEE-VLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQA-TNCRYTCNEWGVGMDITNSGDDNQVGRNE 329 (388)
Q Consensus 252 ~v~~~~pq~~-~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~-~na~~v~~~~G~G~~l~~~~~~~~~~~~~ 329 (388)
.+.+|++++. ++..+++ +|+.+|-+|+.||+++|+|+|+.+....|. .|+..+ .+.|.|+.+ -+.++
T Consensus 268 ~~~G~~~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i-~~~g~g~~~--------~~~~~ 336 (382)
T PLN02605 268 KVRGFVTNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYV-VDNGFGAFS--------ESPKE 336 (382)
T ss_pred EEEeccccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHH-HhCCceeec--------CCHHH
Confidence 7789998765 9999998 999999999999999999999998776776 589888 557998866 47889
Q ss_pred HHHHHHHHHcC-ch
Q 047540 330 VEKLVRELMEG-EK 342 (388)
Q Consensus 330 l~~ai~~vl~~-~~ 342 (388)
+.++|.+++.+ ++
T Consensus 337 la~~i~~ll~~~~~ 350 (382)
T PLN02605 337 IARIVAEWFGDKSD 350 (382)
T ss_pred HHHHHHHHHcCCHH
Confidence 99999999987 44
No 35
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.33 E-value=2.6e-10 Score=110.10 Aligned_cols=137 Identities=14% Similarity=0.122 Sum_probs=95.6
Q ss_pred CCCcEEEeeCCCccCCH-HHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhh---hcCcccccccCh-Hhhhc
Q 047540 190 PNSVVYVNFGSSVYLTK-QQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKA---KETGFIARWCPQ-EEVLN 264 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~pq-~~~L~ 264 (388)
++.+|++..|+...... +.+...+..+.+.+..+++.++... .+.+.+.. .+|+.+.+|..+ ..+|+
T Consensus 180 ~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~--------~~~l~~~~~~~~~~v~~~g~~~~~~~~l~ 251 (350)
T cd03785 180 GKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD--------LEEVKKAYEELGVNYEVFPFIDDMAAAYA 251 (350)
T ss_pred CCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc--------HHHHHHHHhccCCCeEEeehhhhHHHHHH
Confidence 34667676666543211 2233344444433445566666441 12222222 357888888744 45999
Q ss_pred CCCcceeeeccCchhHHHHHhhCCcEEecCC----ccchhHhHHHHhhhhceeEEeeecCCC-CCCCHHHHHHHHHHHHc
Q 047540 265 HPAVGGFFTHSGWNSTIESLCAGVPMICWPF----LGDQATNCRYTCNEWGVGMDITNSGDD-NQVGRNEVEKLVRELME 339 (388)
Q Consensus 265 ~~~~~~~IthgG~~s~~eal~~GvP~i~~P~----~~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~l~~ai~~vl~ 339 (388)
.+++ +|+++|.+++.||+++|+|+|+.|. ..+|..|+..+ .+.|.|..+ + ...+.+++.++|+++++
T Consensus 252 ~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l-~~~g~g~~v-----~~~~~~~~~l~~~i~~ll~ 323 (350)
T cd03785 252 AADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARAL-VKAGAAVLI-----PQEELTPERLAAALLELLS 323 (350)
T ss_pred hcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHH-HhCCCEEEE-----ecCCCCHHHHHHHHHHHhc
Confidence 9998 9999999999999999999999986 35788999998 557999999 5 34689999999999998
Q ss_pred Cch
Q 047540 340 GEK 342 (388)
Q Consensus 340 ~~~ 342 (388)
+++
T Consensus 324 ~~~ 326 (350)
T cd03785 324 DPE 326 (350)
T ss_pred CHH
Confidence 765
No 36
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.33 E-value=4.7e-10 Score=110.46 Aligned_cols=134 Identities=19% Similarity=0.276 Sum_probs=96.5
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHH-hc-CCCCEEEEEcCCCCCCCCCCCchhHHHhh--hcCcccccccChHh-hhc
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGL-VN-SNHPFLWIIRPDLVTGETADMPSEFEVKA--KETGFIARWCPQEE-VLN 264 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al-~~-~~~~~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~pq~~-~L~ 264 (388)
++++|++..|+.+. .+.+..+++++ +. .+.+++++.|.+.. +-+.+.+.. .+++.+.+|.+++. +++
T Consensus 201 ~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~~~------l~~~l~~~~~~~~~v~~~G~~~~~~~~~~ 272 (391)
T PRK13608 201 DKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKSKE------LKRSLTAKFKSNENVLILGYTKHMNEWMA 272 (391)
T ss_pred CCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCCHH------HHHHHHHHhccCCCeEEEeccchHHHHHH
Confidence 45788888898763 23445555553 22 24566666664310 111222221 24677789998764 999
Q ss_pred CCCcceeeeccCchhHHHHHhhCCcEEec-CCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCch
Q 047540 265 HPAVGGFFTHSGWNSTIESLCAGVPMICW-PFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 265 ~~~~~~~IthgG~~s~~eal~~GvP~i~~-P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~ 342 (388)
.+++ ||+..|..|+.||+++|+|+|+. |..++|..|+..+ ++.|+|+.. + +.+++.++|.++++|++
T Consensus 273 ~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~-~~~G~g~~~-----~---~~~~l~~~i~~ll~~~~ 340 (391)
T PRK13608 273 SSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYF-EEKGFGKIA-----D---TPEEAIKIVASLTNGNE 340 (391)
T ss_pred hhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHH-HhCCcEEEe-----C---CHHHHHHHHHHHhcCHH
Confidence 9999 99998888999999999999998 6666677899998 678999887 3 78889999999998875
No 37
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.30 E-value=8.2e-10 Score=108.68 Aligned_cols=135 Identities=17% Similarity=0.140 Sum_probs=90.7
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHHhcC----CCCEEEEEcCCCCCCCCCCCchhHHHhhh-----------------
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGLVNS----NHPFLWIIRPDLVTGETADMPSEFEVKAK----------------- 248 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~iw~~~~~~~~~~~~~~~~~~~~~~~----------------- 248 (388)
+.++|.+-.||....-.+.+..++++++.. +..|++.+.++.. .+.+.+...
T Consensus 204 ~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~-------~~~~~~~l~~~g~~~~~~~~~~~~~~ 276 (396)
T TIGR03492 204 GRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLS-------LEKLQAILEDLGWQLEGSSEDQTSLF 276 (396)
T ss_pred CCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCC-------HHHHHHHHHhcCceecCCccccchhh
Confidence 347899999998543334455555555543 5678887743321 111211111
Q ss_pred --cCcccccccCh-HhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhh----ceeEEeeecCC
Q 047540 249 --ETGFIARWCPQ-EEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEW----GVGMDITNSGD 321 (388)
Q Consensus 249 --~~~~v~~~~pq-~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~----G~G~~l~~~~~ 321 (388)
+++.+..+..+ .++++.+++ +|+.+|..| .|++..|+|+|.+|+-..|. |+... ++. |.++.+
T Consensus 277 ~~~~~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~-~~~~~l~g~~~~l----- 346 (396)
T TIGR03492 277 QKGTLEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFA-EAQSRLLGGSVFL----- 346 (396)
T ss_pred ccCceEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHH-HhhHhhcCCEEec-----
Confidence 12334445444 458999998 999999766 99999999999999877776 98766 442 777777
Q ss_pred CCCCCHHHHHHHHHHHHcCch
Q 047540 322 DNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 322 ~~~~~~~~l~~ai~~vl~~~~ 342 (388)
. ..+.+.+.+++.++++|++
T Consensus 347 ~-~~~~~~l~~~l~~ll~d~~ 366 (396)
T TIGR03492 347 A-SKNPEQAAQVVRQLLADPE 366 (396)
T ss_pred C-CCCHHHHHHHHHHHHcCHH
Confidence 2 2445899999999999875
No 38
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.28 E-value=1.8e-09 Score=105.74 Aligned_cols=134 Identities=16% Similarity=0.258 Sum_probs=96.7
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCCCCCCCchhHHH---hhhcCcccccccChH-hhhc
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGLVNS-NHPFLWIIRPDLVTGETADMPSEFEV---KAKETGFIARWCPQE-EVLN 264 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~pq~-~~L~ 264 (388)
++++|++..|+.+.. +.+..+++++.+. +.+++++.+.+.. +-+.+.+ ..++|+.+.+|+++. ++++
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~~------~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~ 272 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNEA------LKQSLEDLQETNPDALKVFGYVENIDELFR 272 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCHH------HHHHHHHHHhcCCCcEEEEechhhHHHHHH
Confidence 457788877887532 3355667777544 4566766664310 1112221 123478888999885 5999
Q ss_pred CCCcceeeeccCchhHHHHHhhCCcEEec-CCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCch
Q 047540 265 HPAVGGFFTHSGWNSTIESLCAGVPMICW-PFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 265 ~~~~~~~IthgG~~s~~eal~~GvP~i~~-P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~ 342 (388)
.+++ +|+.+|..|+.||+++|+|+|+. |..+.|..|+..+ ++.|+|+.. -+.+++.++|.++++|++
T Consensus 273 ~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~-~~~G~~~~~--------~~~~~l~~~i~~ll~~~~ 340 (380)
T PRK13609 273 VTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYF-ERKGAAVVI--------RDDEEVFAKTEALLQDDM 340 (380)
T ss_pred hccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHH-HhCCcEEEE--------CCHHHHHHHHHHHHCCHH
Confidence 9998 99999988999999999999985 6667778899888 567888876 357899999999999875
No 39
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.24 E-value=3.5e-10 Score=111.05 Aligned_cols=175 Identities=8% Similarity=-0.036 Sum_probs=107.4
Q ss_pred hcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcC-----CCCEEEEEcCCCCCCCCCCCchhHHHhhhcCccccccc-
Q 047540 184 LDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNS-----NHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWC- 257 (388)
Q Consensus 184 l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~- 257 (388)
+...+ ++++|.+..||....-.+....+++++... +.++++......... .+ +.+.+....+..+..+.
T Consensus 185 lgl~~-~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~~~---~~-~~~~~~~~~~~~v~~~~~ 259 (385)
T TIGR00215 185 LGIDH-NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKRRL---QF-EQIKAEYGPDLQLHLIDG 259 (385)
T ss_pred cCCCC-CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchhHH---HH-HHHHHHhCCCCcEEEECc
Confidence 34444 568888888997653233444555444332 234555443221000 00 11111111122332222
Q ss_pred ChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEec----CCcc---------chhHhHHHHhhhhceeEEeeecCCCCC
Q 047540 258 PQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICW----PFLG---------DQATNCRYTCNEWGVGMDITNSGDDNQ 324 (388)
Q Consensus 258 pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~----P~~~---------DQ~~na~~v~~~~G~G~~l~~~~~~~~ 324 (388)
+...+++.+++ ||+.+|..|+ |++++|+|+|++ |+.. .|..|+..+ ...++...+. +.+
T Consensus 260 ~~~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil-~~~~~~pel~----q~~ 331 (385)
T TIGR00215 260 DARKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNIL-ANRLLVPELL----QEE 331 (385)
T ss_pred hHHHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHh-cCCccchhhc----CCC
Confidence 23458889998 9999999888 999999999999 7632 277799888 5568888772 478
Q ss_pred CCHHHHHHHHHHHHcCc----hHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHH
Q 047540 325 VGRNEVEKLVRELMEGE----KGMQMRNKASEWKRFAEEAAAPDGSSATNLEKL 374 (388)
Q Consensus 325 ~~~~~l~~ai~~vl~~~----~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~ 374 (388)
++.+.|.+.+.++|+|+ + ++++.++--..+++.+.++|.+......+
T Consensus 332 ~~~~~l~~~~~~ll~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~a~~i 382 (385)
T TIGR00215 332 CTPHPLAIALLLLLENGLKAYK---EMHRERQFFEELRQRIYCNADSERAAQAV 382 (385)
T ss_pred CCHHHHHHHHHHHhcCCcccHH---HHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 99999999999999998 6 45444444445555555666665444433
No 40
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.07 E-value=3e-08 Score=95.68 Aligned_cols=77 Identities=19% Similarity=0.335 Sum_probs=66.0
Q ss_pred ChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCc---cchhHhHHHHhhhhceeEEeeecCCC-CCCCHHHHHHH
Q 047540 258 PQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFL---GDQATNCRYTCNEWGVGMDITNSGDD-NQVGRNEVEKL 333 (388)
Q Consensus 258 pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~---~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~l~~a 333 (388)
+-.++|+.+++ +|+++|.++++||+++|+|+|+.|.. .+|..|+..+ ...+.|..+ + .+.+.+++.++
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i-~~~~~G~~~-----~~~~~~~~~l~~~ 314 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFL-EDLGAGLVI-----RQKELLPEKLLEA 314 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHH-HHCCCEEEE-----ecccCCHHHHHHH
Confidence 34568999998 99999988999999999999998863 4678898888 567999998 4 55689999999
Q ss_pred HHHHHcCch
Q 047540 334 VRELMEGEK 342 (388)
Q Consensus 334 i~~vl~~~~ 342 (388)
|.++++|++
T Consensus 315 i~~ll~~~~ 323 (348)
T TIGR01133 315 LLKLLLDPA 323 (348)
T ss_pred HHHHHcCHH
Confidence 999998876
No 41
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.03 E-value=3.9e-08 Score=96.21 Aligned_cols=138 Identities=12% Similarity=0.018 Sum_probs=77.4
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHHhc-----CCCCEEEEEcCCCCCCCCCCCchhHHHhhhcC--cccccccCh-Hh
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGLVN-----SNHPFLWIIRPDLVTGETADMPSEFEVKAKET--GFIARWCPQ-EE 261 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~pq-~~ 261 (388)
++++|.+..||...........+++++.. .+..++|+.+.+. ..+.+.+...+. ..+.-+-++ ..
T Consensus 185 ~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~ 257 (380)
T PRK00025 185 DARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK-------RREQIEEALAEYAGLEVTLLDGQKRE 257 (380)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh-------hHHHHHHHHhhcCCCCeEEEcccHHH
Confidence 34677777777543222223444444432 1345666654221 112222222211 112112233 45
Q ss_pred hhcCCCcceeeeccCchhHHHHHhhCCcEEecCCcc--------chhHh-----HHHHhhhhceeEEeeecCCCCCCCHH
Q 047540 262 VLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLG--------DQATN-----CRYTCNEWGVGMDITNSGDDNQVGRN 328 (388)
Q Consensus 262 ~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~--------DQ~~n-----a~~v~~~~G~G~~l~~~~~~~~~~~~ 328 (388)
+++.+++ +|+.+|.+++ |++++|+|+|..|... +|..| +..+ ...+++..+. ....+.+
T Consensus 258 ~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~----~~~~~~~ 329 (380)
T PRK00025 258 AMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLL-AGRELVPELL----QEEATPE 329 (380)
T ss_pred HHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHh-cCCCcchhhc----CCCCCHH
Confidence 8899998 9999998887 9999999999985432 12222 1222 2223333331 3567899
Q ss_pred HHHHHHHHHHcCch
Q 047540 329 EVEKLVRELMEGEK 342 (388)
Q Consensus 329 ~l~~ai~~vl~~~~ 342 (388)
.+.+++.++++|++
T Consensus 330 ~l~~~i~~ll~~~~ 343 (380)
T PRK00025 330 KLARALLPLLADGA 343 (380)
T ss_pred HHHHHHHHHhcCHH
Confidence 99999999999986
No 42
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=98.74 E-value=3.8e-07 Score=87.73 Aligned_cols=150 Identities=13% Similarity=0.054 Sum_probs=87.3
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCCC--CEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccCh-HhhhcCCC
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSNH--PFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQ-EEVLNHPA 267 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~--~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq-~~~L~~~~ 267 (388)
+++|.+-.||...--...+..++++...... ...+...... . +.+.+...+. .....+++ .+++..++
T Consensus 167 ~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~-------~-~~i~~~~~~~-~~~~~~~~~~~~m~~aD 237 (347)
T PRK14089 167 EGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK-------G-KDLKEIYGDI-SEFEISYDTHKALLEAE 237 (347)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc-------H-HHHHHHHhcC-CCcEEeccHHHHHHhhh
Confidence 3789999999765333555545555443322 2222222211 1 2222222211 11122223 45889999
Q ss_pred cceeeeccCchhHHHHHhhCCcEEecCC--ccchhHhHHHHhh--hhceeEEeee--c-C------CCCCCCHHHHHHHH
Q 047540 268 VGGFFTHSGWNSTIESLCAGVPMICWPF--LGDQATNCRYTCN--EWGVGMDITN--S-G------DDNQVGRNEVEKLV 334 (388)
Q Consensus 268 ~~~~IthgG~~s~~eal~~GvP~i~~P~--~~DQ~~na~~v~~--~~G~G~~l~~--~-~------~~~~~~~~~l~~ai 334 (388)
+ +|+.+|..|+ |++.+|+|||+ ++ ..-|+.||++++. ..|+...+.. . + -+++++.+.|.+++
T Consensus 238 l--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i 313 (347)
T PRK14089 238 F--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLKAY 313 (347)
T ss_pred H--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCCHHHHHHHH
Confidence 8 9999999999 99999999998 65 3468889999831 4555555511 0 0 03568899999988
Q ss_pred HHHHcCchHHHHHHHHHHHHHHH
Q 047540 335 RELMEGEKGMQMRNKASEWKRFA 357 (388)
Q Consensus 335 ~~vl~~~~~~~~~~~a~~l~~~~ 357 (388)
.+ ...+ .+++...++.+.+
T Consensus 314 ~~-~~~~---~~~~~~~~l~~~l 332 (347)
T PRK14089 314 KE-MDRE---KFFKKSKELREYL 332 (347)
T ss_pred HH-HHHH---HHHHHHHHHHHHh
Confidence 77 1111 2555555555544
No 43
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.73 E-value=4.1e-08 Score=92.11 Aligned_cols=104 Identities=17% Similarity=0.170 Sum_probs=77.3
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcC--CCCEEEEEcCCCCCCCCCCCchhHHHhh--hcCcccccccChH-hhhcC
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNS--NHPFLWIIRPDLVTGETADMPSEFEVKA--KETGFIARWCPQE-EVLNH 265 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~pq~-~~L~~ 265 (388)
.+.|+|+||..... +....++++|.+. +.++.+++|.... ..+.+.+.. ..|+.+..+++++ ++|..
T Consensus 170 ~~~iLi~~GG~d~~--~~~~~~l~~l~~~~~~~~i~vv~G~~~~------~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~ 241 (279)
T TIGR03590 170 LRRVLVSFGGADPD--NLTLKLLSALAESQINISITLVTGSSNP------NLDELKKFAKEYPNIILFIDVENMAELMNE 241 (279)
T ss_pred cCeEEEEeCCcCCc--CHHHHHHHHHhccccCceEEEEECCCCc------CHHHHHHHHHhCCCEEEEeCHHHHHHHHHH
Confidence 36789999865432 2445566776653 4567788875431 112232222 3578889999997 59999
Q ss_pred CCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHH
Q 047540 266 PAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRY 305 (388)
Q Consensus 266 ~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~ 305 (388)
+++ +||+|| +|+.|++++|+|+|++|+..+|..||+.
T Consensus 242 aDl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 242 ADL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred CCE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 999 999999 9999999999999999999999999975
No 44
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.73 E-value=1.5e-05 Score=76.16 Aligned_cols=130 Identities=12% Similarity=0.137 Sum_probs=84.2
Q ss_pred CCcEEEeeCCCcc-CCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHh---hhcC
Q 047540 191 NSVVYVNFGSSVY-LTKQQLTEVAMGLVNS-NHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEE---VLNH 265 (388)
Q Consensus 191 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~---~L~~ 265 (388)
++.+++..|+... ...+.+.+++..+... +..+++. |.... ...+. ...+|+.+.+|+++.+ +++.
T Consensus 196 ~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~-G~~~~-------~~~~~-~~~~~v~~~g~~~~~~~~~~~~~ 266 (364)
T cd03814 196 DRPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIV-GDGPA-------RARLE-ARYPNVHFLGFLDGEELAAAYAS 266 (364)
T ss_pred CCeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEE-eCCch-------HHHHh-ccCCcEEEEeccCHHHHHHHHHh
Confidence 3566777787643 2334444444544432 3444444 43211 11111 2345788889888765 7888
Q ss_pred CCcceeeeccC----chhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCc
Q 047540 266 PAVGGFFTHSG----WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGE 341 (388)
Q Consensus 266 ~~~~~~IthgG----~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~ 341 (388)
+++ +|..+. -++++||+++|+|+|+.+..+ +...+ ++.+.|..+ + .-+.+++.++|.+++.++
T Consensus 267 ~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i-~~~~~g~~~-----~-~~~~~~l~~~i~~l~~~~ 333 (364)
T cd03814 267 ADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIV-TDGENGLLV-----E-PGDAEAFAAALAALLADP 333 (364)
T ss_pred CCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhh-cCCcceEEc-----C-CCCHHHHHHHHHHHHcCH
Confidence 888 776654 367999999999999987553 44445 556888887 3 457788999999999987
Q ss_pred h
Q 047540 342 K 342 (388)
Q Consensus 342 ~ 342 (388)
+
T Consensus 334 ~ 334 (364)
T cd03814 334 E 334 (364)
T ss_pred H
Confidence 6
No 45
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.63 E-value=2.1e-05 Score=78.27 Aligned_cols=81 Identities=15% Similarity=0.181 Sum_probs=58.3
Q ss_pred hhhcCCCcceeeec-----cCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHH
Q 047540 261 EVLNHPAVGGFFTH-----SGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVR 335 (388)
Q Consensus 261 ~~L~~~~~~~~Ith-----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~ 335 (388)
.+++.+++ ++.. +|-.+++||+++|+|+|+-|...++......+ .+.|+++.. -+.+++.++|.
T Consensus 315 ~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~-~~~g~~~~~--------~d~~~La~~l~ 383 (425)
T PRK05749 315 LLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL-LQAGAAIQV--------EDAEDLAKAVT 383 (425)
T ss_pred HHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH-HHCCCeEEE--------CCHHHHHHHHH
Confidence 47788887 3331 23346999999999999999988888877776 445766665 36789999999
Q ss_pred HHHcCchH-HHHHHHHHH
Q 047540 336 ELMEGEKG-MQMRNKASE 352 (388)
Q Consensus 336 ~vl~~~~~-~~~~~~a~~ 352 (388)
++++|++. +.|.+++++
T Consensus 384 ~ll~~~~~~~~m~~~a~~ 401 (425)
T PRK05749 384 YLLTDPDARQAYGEAGVA 401 (425)
T ss_pred HHhcCHHHHHHHHHHHHH
Confidence 99998752 234444433
No 46
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=98.56 E-value=8.7e-07 Score=82.82 Aligned_cols=136 Identities=14% Similarity=0.158 Sum_probs=103.1
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHHhc-CCCC--EEEEEcCCCCCCCCCCCchhHHHhh----h--cCcccccccChH
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGLVN-SNHP--FLWIIRPDLVTGETADMPSEFEVKA----K--ETGFIARWCPQE 260 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~-~~~~--~iw~~~~~~~~~~~~~~~~~~~~~~----~--~~~~v~~~~pq~ 260 (388)
++..|+||-|... -..+.+...+.|-.- .+.+ .+.++|.. +|....+++ + +++.+..|-.+.
T Consensus 218 E~~~Ilvs~GGG~-dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~--------MP~~~r~~l~~~A~~~p~i~I~~f~~~~ 288 (400)
T COG4671 218 EGFDILVSVGGGA-DGAELIETALAAAQLLAGLNHKWLIVTGPF--------MPEAQRQKLLASAPKRPHISIFEFRNDF 288 (400)
T ss_pred ccceEEEecCCCh-hhHHHHHHHHHHhhhCCCCCcceEEEeCCC--------CCHHHHHHHHHhcccCCCeEEEEhhhhH
Confidence 3467888877633 345667776666544 3433 55566655 566544443 3 567788887775
Q ss_pred -hhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCc---cchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHH
Q 047540 261 -EVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFL---GDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRE 336 (388)
Q Consensus 261 -~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~---~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ 336 (388)
+++.-++. +|+-||.||++|-|.+|+|.+++|+. -+|..-|.|+ +++|+--.+. ...+++..++++|..
T Consensus 289 ~~ll~gA~~--vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl-~~LGL~dvL~----pe~lt~~~La~al~~ 361 (400)
T COG4671 289 ESLLAGARL--VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRL-EELGLVDVLL----PENLTPQNLADALKA 361 (400)
T ss_pred HHHHHhhhe--eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHH-HhcCcceeeC----cccCChHHHHHHHHh
Confidence 48888888 99999999999999999999999984 3899999999 8899988872 478999999999999
Q ss_pred HHcCc
Q 047540 337 LMEGE 341 (388)
Q Consensus 337 vl~~~ 341 (388)
.++-+
T Consensus 362 ~l~~P 366 (400)
T COG4671 362 ALARP 366 (400)
T ss_pred cccCC
Confidence 98743
No 47
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.46 E-value=0.00034 Score=70.56 Aligned_cols=138 Identities=14% Similarity=0.083 Sum_probs=85.3
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcCC-CCEEEEEcCCCCCCCCCCCchhHHHhh-hcCcccccccChHh---hhcCC
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNSN-HPFLWIIRPDLVTGETADMPSEFEVKA-KETGFIARWCPQEE---VLNHP 266 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~iw~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~pq~~---~L~~~ 266 (388)
..+++..|++.. .+.+..++++++..+ .++++ +|... ..+.+.+.. ..++.+.+|+++.+ +|+.+
T Consensus 263 ~~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~i-vG~G~-------~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~a 332 (465)
T PLN02871 263 KPLIVYVGRLGA--EKNLDFLKRVMERLPGARLAF-VGDGP-------YREELEKMFAGTPTVFTGMLQGDELSQAYASG 332 (465)
T ss_pred CeEEEEeCCCch--hhhHHHHHHHHHhCCCcEEEE-EeCCh-------HHHHHHHHhccCCeEEeccCCHHHHHHHHHHC
Confidence 445566677642 344666777776654 45554 44321 112222222 24677789987654 78888
Q ss_pred CcceeeeccC----chhHHHHHhhCCcEEecCCccchhHhHHHHhhh---hceeEEeeecCCCCCCCHHHHHHHHHHHHc
Q 047540 267 AVGGFFTHSG----WNSTIESLCAGVPMICWPFLGDQATNCRYTCNE---WGVGMDITNSGDDNQVGRNEVEKLVRELME 339 (388)
Q Consensus 267 ~~~~~IthgG----~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~---~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~ 339 (388)
++ ||.-.. -.+++||+++|+|+|+....+ ....+ +. -+.|..+ + .-+.+++.++|.++++
T Consensus 333 Dv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv-~~~~~~~~G~lv-----~-~~d~~~la~~i~~ll~ 399 (465)
T PLN02871 333 DV--FVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDII-PPDQEGKTGFLY-----T-PGDVDDCVEKLETLLA 399 (465)
T ss_pred CE--EEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhh-hcCCCCCceEEe-----C-CCCHHHHHHHHHHHHh
Confidence 88 775443 246899999999999876432 22233 43 5788888 4 2467899999999998
Q ss_pred CchH-HHHHHHHHH
Q 047540 340 GEKG-MQMRNKASE 352 (388)
Q Consensus 340 ~~~~-~~~~~~a~~ 352 (388)
|++. +.+.+++++
T Consensus 400 ~~~~~~~~~~~a~~ 413 (465)
T PLN02871 400 DPELRERMGAAARE 413 (465)
T ss_pred CHHHHHHHHHHHHH
Confidence 8752 334444444
No 48
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.45 E-value=9.9e-06 Score=78.93 Aligned_cols=129 Identities=9% Similarity=0.130 Sum_probs=79.2
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcC-----CCCEEEEEcCCCCCCCCCCCchhHHHhh--hcCcccccccChH---h
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNS-----NHPFLWIIRPDLVTGETADMPSEFEVKA--KETGFIARWCPQE---E 261 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~pq~---~ 261 (388)
.+|+++++-.... .+.+..+++++... +.++++...++.. ....+.+.. .+++.+.+.+++. .
T Consensus 198 ~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 270 (365)
T TIGR00236 198 RYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLNPV------VREPLHKHLGDSKRVHLIEPLEYLDFLN 270 (365)
T ss_pred CEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCChH------HHHHHHHHhCCCCCEEEECCCChHHHHH
Confidence 5566654322111 13466677776543 3556665443211 011121212 2466666655554 4
Q ss_pred hhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCc
Q 047540 262 VLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGE 341 (388)
Q Consensus 262 ~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~ 341 (388)
+++++++ ||+..|.. +.||+++|+|+|.++..++++. .+ + .|.+..+ . .+.++|.+++.++++|+
T Consensus 271 ~l~~ad~--vv~~Sg~~-~~EA~a~g~PvI~~~~~~~~~e---~~-~-~g~~~lv-----~--~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 271 LAANSHL--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPE---TV-E-AGTNKLV-----G--TDKENITKAAKRLLTDP 335 (365)
T ss_pred HHHhCCE--EEECChhH-HHHHHHcCCCEEECCCCCCChH---HH-h-cCceEEe-----C--CCHHHHHHHHHHHHhCh
Confidence 6778887 89877644 7999999999999986666553 22 3 4777766 3 47889999999999887
Q ss_pred h
Q 047540 342 K 342 (388)
Q Consensus 342 ~ 342 (388)
+
T Consensus 336 ~ 336 (365)
T TIGR00236 336 D 336 (365)
T ss_pred H
Confidence 6
No 49
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.41 E-value=1.3e-05 Score=77.87 Aligned_cols=131 Identities=14% Similarity=0.102 Sum_probs=82.3
Q ss_pred CCcEEEeeCCCccC-CHHHHHHHHHHHhcCCC-CEEEEEcCCCCCCCCCCCchhHHHh---h---hcCcccccccChH--
Q 047540 191 NSVVYVNFGSSVYL-TKQQLTEVAMGLVNSNH-PFLWIIRPDLVTGETADMPSEFEVK---A---KETGFIARWCPQE-- 260 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~-~~~~~~~~~~al~~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~---~---~~~~~v~~~~pq~-- 260 (388)
++.|++.+|..... ..+.+..+++++..... .+.++...+.. ....+.+. . .+++.+.+..++.
T Consensus 198 ~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~------~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~ 271 (363)
T cd03786 198 KKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR------TRPRIREAGLEFLGHHPNVLLISPLGYLYF 271 (363)
T ss_pred CCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC------hHHHHHHHHHhhccCCCCEEEECCcCHHHH
Confidence 46788887776543 35667778888776533 24434332211 01222221 1 2456665544433
Q ss_pred -hhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHc
Q 047540 261 -EVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELME 339 (388)
Q Consensus 261 -~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~ 339 (388)
.++..+++ ||+.+| +.+.|++++|+|+|.++.. |. +..+ .+.|++..+ .. +.++|.++|.++++
T Consensus 272 ~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~-~~~g~~~~~-----~~--~~~~i~~~i~~ll~ 336 (363)
T cd03786 272 LLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPET-VESGTNVLV-----GT--DPEAILAAIEKLLS 336 (363)
T ss_pred HHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchh-hheeeEEec-----CC--CHHHHHHHHHHHhc
Confidence 36777888 999999 7778999999999998743 22 3233 335776666 32 57899999999999
Q ss_pred Cch
Q 047540 340 GEK 342 (388)
Q Consensus 340 ~~~ 342 (388)
++.
T Consensus 337 ~~~ 339 (363)
T cd03786 337 DEF 339 (363)
T ss_pred Cch
Confidence 875
No 50
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.27 E-value=0.00097 Score=63.64 Aligned_cols=130 Identities=13% Similarity=0.129 Sum_probs=79.6
Q ss_pred CCcEEEeeCCCcc-CCHHHHHHHHHHHhc--CCCCEEEEEcCCCCCCCCCCCchhHHHh-----hhcCcccccccChHh-
Q 047540 191 NSVVYVNFGSSVY-LTKQQLTEVAMGLVN--SNHPFLWIIRPDLVTGETADMPSEFEVK-----AKETGFIARWCPQEE- 261 (388)
Q Consensus 191 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~pq~~- 261 (388)
++.+++..|+... ...+.+..++..+.. .+..+++.-++.. .+.+.+. ..+++.+.+++|+.+
T Consensus 201 ~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~~--------~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 272 (374)
T cd03817 201 DEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGPE--------REELEELARELGLADRVIFTGFVPREEL 272 (374)
T ss_pred CCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCch--------HHHHHHHHHHcCCCCcEEEeccCChHHH
Confidence 4566677787653 233444444444443 3345454433221 1112211 245778899998754
Q ss_pred --hhcCCCcceeeeccC----chhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHH
Q 047540 262 --VLNHPAVGGFFTHSG----WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVR 335 (388)
Q Consensus 262 --~L~~~~~~~~IthgG----~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~ 335 (388)
++..+++ +|..+. -+++.||+++|+|+|+.+.. ..+..+ +..+.|..+ +. -+. ++.+++.
T Consensus 273 ~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~----~~~~~i-~~~~~g~~~-----~~-~~~-~~~~~i~ 338 (374)
T cd03817 273 PDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDAP----GLPDLV-ADGENGFLF-----PP-GDE-ALAEALL 338 (374)
T ss_pred HHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCCC----Chhhhe-ecCceeEEe-----CC-CCH-HHHHHHH
Confidence 7888888 664332 36899999999999987643 334445 555788888 42 122 8999999
Q ss_pred HHHcCch
Q 047540 336 ELMEGEK 342 (388)
Q Consensus 336 ~vl~~~~ 342 (388)
+++++++
T Consensus 339 ~l~~~~~ 345 (374)
T cd03817 339 RLLQDPE 345 (374)
T ss_pred HHHhChH
Confidence 9998875
No 51
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.26 E-value=0.00053 Score=66.90 Aligned_cols=81 Identities=14% Similarity=0.248 Sum_probs=60.8
Q ss_pred cCcccccccChHh---hhcCCCcceeeecc---Cc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCC
Q 047540 249 ETGFIARWCPQEE---VLNHPAVGGFFTHS---GW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGD 321 (388)
Q Consensus 249 ~~~~v~~~~pq~~---~L~~~~~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 321 (388)
+++.+.+|+|+.+ ++..+++ +|..+ |. .+++||+++|+|+|+-+..+ ....+ ++.+.|..+
T Consensus 283 ~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i-~~~~~g~~~----- 350 (398)
T cd03800 283 DRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIV-VDGVTGLLV----- 350 (398)
T ss_pred ceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHc-cCCCCeEEe-----
Confidence 5677899999765 6888888 66432 22 57999999999999876543 44445 555789888
Q ss_pred CCCCCHHHHHHHHHHHHcCch
Q 047540 322 DNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 322 ~~~~~~~~l~~ai~~vl~~~~ 342 (388)
+ .-+.+++.++|.+++++++
T Consensus 351 ~-~~~~~~l~~~i~~l~~~~~ 370 (398)
T cd03800 351 D-PRDPEALAAALRRLLTDPA 370 (398)
T ss_pred C-CCCHHHHHHHHHHHHhCHH
Confidence 4 2468999999999998865
No 52
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.23 E-value=0.00013 Score=70.41 Aligned_cols=127 Identities=13% Similarity=0.139 Sum_probs=85.2
Q ss_pred EEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHh---hhcCCCcce
Q 047540 194 VYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEE---VLNHPAVGG 270 (388)
Q Consensus 194 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~---~L~~~~~~~ 270 (388)
.++..|++.. .+....++++++..+.+++++-.+.. .+.+.+...+|+.+.+++|+.+ +++.+++-+
T Consensus 197 ~il~~G~~~~--~K~~~~li~a~~~~~~~l~ivG~g~~--------~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v 266 (351)
T cd03804 197 YYLSVGRLVP--YKRIDLAIEAFNKLGKRLVVIGDGPE--------LDRLRAKAGPNVTFLGRVSDEELRDLYARARAFL 266 (351)
T ss_pred EEEEEEcCcc--ccChHHHHHHHHHCCCcEEEEECChh--------HHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEE
Confidence 3455666542 34566677888777777665544321 1233334567888999999853 788888833
Q ss_pred eeeccCch-hHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCc
Q 047540 271 FFTHSGWN-STIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGE 341 (388)
Q Consensus 271 ~IthgG~~-s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~ 341 (388)
+-+.-|.| ++.||+++|+|+|+....+ ....+ +.-+.|..+ + .-+.+++.++|.++++++
T Consensus 267 ~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i-~~~~~G~~~-----~-~~~~~~la~~i~~l~~~~ 327 (351)
T cd03804 267 FPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETV-IDGVTGILF-----E-EQTVESLAAAVERFEKNE 327 (351)
T ss_pred ECCcCCCCchHHHHHHcCCCEEEeCCCC----Cccee-eCCCCEEEe-----C-CCCHHHHHHHHHHHHhCc
Confidence 33444443 5789999999999976533 22334 444678888 4 247788999999999887
No 53
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.20 E-value=0.00046 Score=66.65 Aligned_cols=82 Identities=15% Similarity=0.183 Sum_probs=61.0
Q ss_pred hcCcccccccChHh---hhcCCCcceeeecc---------C-chhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeE
Q 047540 248 KETGFIARWCPQEE---VLNHPAVGGFFTHS---------G-WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGM 314 (388)
Q Consensus 248 ~~~~~v~~~~pq~~---~L~~~~~~~~Ithg---------G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~ 314 (388)
.+++.+.+++|+.+ +++.+++ +|..+ | -+++.||+++|+|+|+-+..+ +...+ ...+.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i-~~~~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAV-EDGETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhhe-ecCCeeE
Confidence 45677788888654 6888888 55322 2 368999999999999876543 55555 4557888
Q ss_pred EeeecCCCCCCCHHHHHHHHHHHHcCch
Q 047540 315 DITNSGDDNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 315 ~l~~~~~~~~~~~~~l~~ai~~vl~~~~ 342 (388)
.+ + .-+.+++.++|.+++++++
T Consensus 317 ~~-----~-~~d~~~l~~~i~~l~~~~~ 338 (367)
T cd05844 317 LV-----P-EGDVAALAAALGRLLADPD 338 (367)
T ss_pred EE-----C-CCCHHHHHHHHHHHHcCHH
Confidence 88 3 3577899999999999875
No 54
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.17 E-value=9.2e-05 Score=71.63 Aligned_cols=274 Identities=15% Similarity=0.131 Sum_probs=136.4
Q ss_pred ccHHHHHHHHHhhcCCCCccEEEEcC--Cc-chHHHHHHHhCCCeEEEccCchhHHHHhhhhcccccCCCCCcccccchh
Q 047540 26 MLQPFLDLLQKLKSSSNSVSCIISDG--FM-PFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTLEENTTLTSLIDLNSY 102 (388)
Q Consensus 26 ~~~~~~~ll~~l~~~~~~~D~iI~D~--~~-~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~pr~~~~~~~ 102 (388)
+...+.+++... +||+||+-. +. .+++.+|..++||++-+-.+.- . +... ...
T Consensus 55 ~~~~~~~~~~~~-----~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlR-s---~d~~---------------~g~ 110 (346)
T PF02350_consen 55 AIIELADVLERE-----KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGLR-S---GDRT---------------EGM 110 (346)
T ss_dssp HHHHHHHHHHHH-----T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES---------S-TT---------------SST
T ss_pred HHHHHHHHHHhc-----CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCCC-c---cccC---------------CCC
Confidence 345567777776 899999854 32 4678889999999777632210 0 0000 001
Q ss_pred HHHHHHHHHHhhccCCeEEEcChhhhhHHHHHHHHhh---CCCceecCCcccchhhccccCCCCCCCCCCCCCCcccchH
Q 047540 103 ATRVAIEAAKNAAKASAVVIHTFDALERQVLDALSAM---FPNLFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETE 179 (388)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~~~~~~---~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (388)
.-+..+.... .-++..++.|-...+. +... ..+++.+|-...+.-... .. ... ....
T Consensus 111 ~de~~R~~i~--~la~lhf~~t~~~~~~-----L~~~G~~~~rI~~vG~~~~D~l~~~-~~-----~~~-------~~~~ 170 (346)
T PF02350_consen 111 PDEINRHAID--KLAHLHFAPTEEARER-----LLQEGEPPERIFVVGNPGIDALLQN-KE-----EIE-------EKYK 170 (346)
T ss_dssp THHHHHHHHH--HH-SEEEESSHHHHHH-----HHHTT--GGGEEE---HHHHHHHHH-HH-----TTC-------C-HH
T ss_pred chhhhhhhhh--hhhhhhccCCHHHHHH-----HHhcCCCCCeEEEEChHHHHHHHHh-HH-----HHh-------hhhh
Confidence 1222233333 3466778877433322 1222 136888887654321100 00 000 0100
Q ss_pred HHHHhcCCCCCCCcEEEeeCCCccCC----HHHHHHHHHHHhcC-CCCEEEEEcCCCCCCCCCCCchhHHHhhh--cCcc
Q 047540 180 CLQWLDSKELPNSVVYVNFGSSVYLT----KQQLTEVAMGLVNS-NHPFLWIIRPDLVTGETADMPSEFEVKAK--ETGF 252 (388)
Q Consensus 180 l~~~l~~~~~~~~~v~vs~Gs~~~~~----~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 252 (388)
...++.. . .++.+++++=...... ...+.+++++|.+. +.++||....+.. ....+.+... +|+.
T Consensus 171 ~~~i~~~-~-~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~------~~~~i~~~l~~~~~v~ 242 (346)
T PF02350_consen 171 NSGILQD-A-PKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPR------GSDIIIEKLKKYDNVR 242 (346)
T ss_dssp HHHHHHC-T-TSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HH------HHHHHHHHHTT-TTEE
T ss_pred hHHHHhc-c-CCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCch------HHHHHHHHhcccCCEE
Confidence 1133323 3 4689999884444333 24566677777665 7789988763321 0111222221 4677
Q ss_pred cccccCh---HhhhcCCCcceeeeccCchhHH-HHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHH
Q 047540 253 IARWCPQ---EEVLNHPAVGGFFTHSGWNSTI-ESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRN 328 (388)
Q Consensus 253 v~~~~pq---~~~L~~~~~~~~IthgG~~s~~-eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~ 328 (388)
+.+-+++ ..+|.++++ +||.+| ++. ||.++|+|+|.+=..++.+. - ...|..+.+ + .+.+
T Consensus 243 ~~~~l~~~~~l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~iR~~geRqe---~--r~~~~nvlv-----~--~~~~ 306 (346)
T PF02350_consen 243 LIEPLGYEEYLSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNIRDSGERQE---G--RERGSNVLV-----G--TDPE 306 (346)
T ss_dssp EE----HHHHHHHHHHESE--EEESSH--HHHHHGGGGT--EEECSSS-S-HH---H--HHTTSEEEE-----T--SSHH
T ss_pred EECCCCHHHHHHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEecCCCCCHH---H--HhhcceEEe-----C--CCHH
Confidence 7655554 458889988 999998 666 99999999999933333222 1 224666667 3 7899
Q ss_pred HHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHH
Q 047540 329 EVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLE 375 (388)
Q Consensus 329 ~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v 375 (388)
+|.+++++++.+.. ..++......-+. +|.+.+.+.+++
T Consensus 307 ~I~~ai~~~l~~~~---~~~~~~~~~npYg-----dG~as~rI~~~L 345 (346)
T PF02350_consen 307 AIIQAIEKALSDKD---FYRKLKNRPNPYG-----DGNASERIVEIL 345 (346)
T ss_dssp HHHHHHHHHHH-HH---HHHHHHCS--TT------SS-HHHHHHHHH
T ss_pred HHHHHHHHHHhChH---HHHhhccCCCCCC-----CCcHHHHHHHhh
Confidence 99999999998743 4444433333333 354444444443
No 55
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=98.17 E-value=0.0012 Score=66.21 Aligned_cols=82 Identities=9% Similarity=0.177 Sum_probs=56.9
Q ss_pred hcCcccccccChHh---hhcCC----Ccceeeecc---Cc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEe
Q 047540 248 KETGFIARWCPQEE---VLNHP----AVGGFFTHS---GW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDI 316 (388)
Q Consensus 248 ~~~~~v~~~~pq~~---~L~~~----~~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l 316 (388)
.+++.+.+++++.+ +++.+ ++ ||... |. .+++||+++|+|+|+-...+ +...+ +.-..|+.+
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv--~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv-~~~~~G~lv 388 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGI--FVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDII-ANCRNGLLV 388 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCE--EecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHh-cCCCcEEEe
Confidence 34566667777654 46544 45 77654 43 48999999999999876532 33344 443578888
Q ss_pred eecCCCCCCCHHHHHHHHHHHHcCch
Q 047540 317 TNSGDDNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 317 ~~~~~~~~~~~~~l~~ai~~vl~~~~ 342 (388)
+ .-+.+++.++|.++++|++
T Consensus 389 -----~-~~d~~~la~~i~~ll~~~~ 408 (439)
T TIGR02472 389 -----D-VLDLEAIASALEDALSDSS 408 (439)
T ss_pred -----C-CCCHHHHHHHHHHHHhCHH
Confidence 3 3478899999999998875
No 56
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.16 E-value=0.0011 Score=63.00 Aligned_cols=134 Identities=15% Similarity=0.136 Sum_probs=80.9
Q ss_pred CCCcEEEeeCCCccC-CHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHh---hhcC
Q 047540 190 PNSVVYVNFGSSVYL-TKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEE---VLNH 265 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~-~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~---~L~~ 265 (388)
+++.+++..|+.... ..+.+.+.+..+...+..+++. |...... ..........++.+.+|+++.+ +++.
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~-G~~~~~~-----~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 262 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIV-GNGLELE-----EESYELEGDPRVEFLGAYPQEEIDDFYAE 262 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEE-cCchhhh-----HHHHhhcCCCeEEEeCCCCHHHHHHHHHh
Confidence 346777778886432 2333434444443334555444 4321100 0000001235778899997654 6888
Q ss_pred CCcceeee----ccCc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 266 PAVGGFFT----HSGW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 266 ~~~~~~It----hgG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
+++ +|. ..|. .++.||+++|+|+|+.+.. .....+ +..+.|..+ + .-+.+++.+++.+++++
T Consensus 263 ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i-~~~~~g~~~-----~-~~d~~~l~~~i~~l~~~ 329 (359)
T cd03823 263 IDV--LVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELV-RDGVNGLLF-----P-PGDAEDLAAALERLIDD 329 (359)
T ss_pred CCE--EEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHh-cCCCcEEEE-----C-CCCHHHHHHHHHHHHhC
Confidence 888 553 2344 4789999999999987643 344555 544578888 3 24589999999999997
Q ss_pred ch
Q 047540 341 EK 342 (388)
Q Consensus 341 ~~ 342 (388)
+.
T Consensus 330 ~~ 331 (359)
T cd03823 330 PD 331 (359)
T ss_pred hH
Confidence 75
No 57
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.16 E-value=8.6e-06 Score=67.01 Aligned_cols=113 Identities=18% Similarity=0.208 Sum_probs=75.5
Q ss_pred CCcEEEeeCCCccCC---HHHHHHHHHHHhcCCC-CEEEEEcCCCCCCCCCCCchhHHHhhhcCc--c--cccccCh-Hh
Q 047540 191 NSVVYVNFGSSVYLT---KQQLTEVAMGLVNSNH-PFLWIIRPDLVTGETADMPSEFEVKAKETG--F--IARWCPQ-EE 261 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~---~~~~~~~~~al~~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~--~--v~~~~pq-~~ 261 (388)
...+||+-||..... .-...+.++.|.+.|. +.+..+|.+... .++.... ...|. . ..+|-|. .+
T Consensus 3 ~~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~-----~~d~~~~-~~k~~gl~id~y~f~psl~e 76 (170)
T KOG3349|consen 3 LMTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPF-----FGDPIDL-IRKNGGLTIDGYDFSPSLTE 76 (170)
T ss_pred ceEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccC-----CCCHHHh-hcccCCeEEEEEecCccHHH
Confidence 358999999976311 1123446777888885 666777755211 1221111 11122 2 2667787 45
Q ss_pred hhcCCCcceeeeccCchhHHHHHhhCCcEEecCC----ccchhHhHHHHhhhhce
Q 047540 262 VLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPF----LGDQATNCRYTCNEWGV 312 (388)
Q Consensus 262 ~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~----~~DQ~~na~~v~~~~G~ 312 (388)
..+.+++ +|+|+|+||++|.|..|+|.|+++- ..+|..-|..++ +.|-
T Consensus 77 ~I~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~-~egy 128 (170)
T KOG3349|consen 77 DIRSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLA-EEGY 128 (170)
T ss_pred HHhhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHH-hcCc
Confidence 7777888 9999999999999999999999994 568999999984 4354
No 58
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.16 E-value=0.0019 Score=60.98 Aligned_cols=82 Identities=12% Similarity=0.196 Sum_probs=60.5
Q ss_pred hcCcccccccChHh---hhcCCCcceeeec----cCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecC
Q 047540 248 KETGFIARWCPQEE---VLNHPAVGGFFTH----SGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSG 320 (388)
Q Consensus 248 ~~~~~v~~~~pq~~---~L~~~~~~~~Ith----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 320 (388)
.+++.+.+++++.+ ++..+++ +|.- +.-++++||+++|+|+|+.+. ......+ +..+.|..+
T Consensus 255 ~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~-~~~~~g~~~---- 323 (374)
T cd03801 255 GDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVV-EDGETGLLV---- 323 (374)
T ss_pred CcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHh-cCCcceEEe----
Confidence 46778889986543 7888888 5532 334689999999999998776 2344445 445778887
Q ss_pred CCCCCCHHHHHHHHHHHHcCch
Q 047540 321 DDNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 321 ~~~~~~~~~l~~ai~~vl~~~~ 342 (388)
+ ..+.+++.++|.+++++++
T Consensus 324 -~-~~~~~~l~~~i~~~~~~~~ 343 (374)
T cd03801 324 -P-PGDPEALAEAILRLLDDPE 343 (374)
T ss_pred -C-CCCHHHHHHHHHHHHcChH
Confidence 3 3458999999999998875
No 59
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.07 E-value=0.00044 Score=67.18 Aligned_cols=167 Identities=16% Similarity=0.114 Sum_probs=90.1
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHHh---c--CCCCEEEEEcCCCCCCCCCCCchhHHH---hhhcCccccc-ccChH
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGLV---N--SNHPFLWIIRPDLVTGETADMPSEFEV---KAKETGFIAR-WCPQE 260 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~---~--~~~~~iw~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~-~~pq~ 260 (388)
++++|-+-.||...--...+..++++.+ + .+..|++...... ...-+.. ....+..+.- .-...
T Consensus 183 ~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~-------~~~~i~~~~~~~~~~~~~~~~~~~~~ 255 (373)
T PF02684_consen 183 DKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV-------HEELIEEILAEYPPDVSIVIIEGESY 255 (373)
T ss_pred CCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH-------HHHHHHHHHHhhCCCCeEEEcCCchH
Confidence 4599999999964322233344455443 2 2345555543221 1110111 1112222221 12345
Q ss_pred hhhcCCCcceeeeccCchhHHHHHhhCCcEEecCC-ccchhHhHHHHhhhhceeE--EeeecCC------CCCCCHHHHH
Q 047540 261 EVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPF-LGDQATNCRYTCNEWGVGM--DITNSGD------DNQVGRNEVE 331 (388)
Q Consensus 261 ~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~-~~DQ~~na~~v~~~~G~G~--~l~~~~~------~~~~~~~~l~ 331 (388)
+++..+++ .+.-+|. .++|+..+|+|||++=- ..=-+..|++++.--=+|+ .+. .++ ..+.+.+.|.
T Consensus 256 ~~m~~ad~--al~~SGT-aTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia-~~~v~PEliQ~~~~~~~i~ 331 (373)
T PF02684_consen 256 DAMAAADA--ALAASGT-ATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIA-GREVVPELIQEDATPENIA 331 (373)
T ss_pred HHHHhCcc--hhhcCCH-HHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhc-CCCcchhhhcccCCHHHHH
Confidence 58888887 5554443 58999999999988533 2234446666632111221 110 000 3478999999
Q ss_pred HHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHH
Q 047540 332 KLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATN 370 (388)
Q Consensus 332 ~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~ 370 (388)
+++.+++.|++ .++......+.+++..+.|.++..+
T Consensus 332 ~~~~~ll~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (373)
T PF02684_consen 332 AELLELLENPE---KRKKQKELFREIRQLLGPGASSRAA 367 (373)
T ss_pred HHHHHHhcCHH---HHHHHHHHHHHHHHhhhhccCCHHH
Confidence 99999999986 4545555555555555556666443
No 60
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.07 E-value=0.00091 Score=64.03 Aligned_cols=142 Identities=15% Similarity=0.137 Sum_probs=87.4
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCC-CCEEEEEcCCCCCCCCCCCchhHHH-----hhhcCcccccccChHh---
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSN-HPFLWIIRPDLVTGETADMPSEFEV-----KAKETGFIARWCPQEE--- 261 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~iw~~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~pq~~--- 261 (388)
+..+++..|+... .+....+++++.... ..+++...+. ....+.+ ...+|+.+.+|+|+.+
T Consensus 190 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~l~i~G~g~--------~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~ 259 (357)
T cd03795 190 GRPFFLFVGRLVY--YKGLDVLLEAAAALPDAPLVIVGEGP--------LEAELEALAAALGLLDRVRFLGRLDDEEKAA 259 (357)
T ss_pred CCcEEEEeccccc--ccCHHHHHHHHHhccCcEEEEEeCCh--------hHHHHHHHHHhcCCcceEEEcCCCCHHHHHH
Confidence 3567777787642 244556677776666 4444443221 1122221 1246788899999754
Q ss_pred hhcCCCcceeeec---cCc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHH
Q 047540 262 VLNHPAVGGFFTH---SGW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVREL 337 (388)
Q Consensus 262 ~L~~~~~~~~Ith---gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~v 337 (388)
+++.+++.++.++ -|. .++.||+++|+|+|+....+.... +...-+.|..+ + .-+.+++.++|.++
T Consensus 260 ~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~----i~~~~~~g~~~-----~-~~d~~~~~~~i~~l 329 (357)
T cd03795 260 LLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSY----VNLHGVTGLVV-----P-PGDPAALAEAIRRL 329 (357)
T ss_pred HHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhH----HhhCCCceEEe-----C-CCCHHHHHHHHHHH
Confidence 7778888444442 344 469999999999999765444332 21113678777 3 35789999999999
Q ss_pred HcCchH-HHHHHHHHH
Q 047540 338 MEGEKG-MQMRNKASE 352 (388)
Q Consensus 338 l~~~~~-~~~~~~a~~ 352 (388)
+++++. +.+++++++
T Consensus 330 ~~~~~~~~~~~~~~~~ 345 (357)
T cd03795 330 LEDPELRERLGEAARE 345 (357)
T ss_pred HHCHHHHHHHHHHHHH
Confidence 998752 234444433
No 61
>PRK10307 putative glycosyl transferase; Provisional
Probab=98.05 E-value=0.0065 Score=60.10 Aligned_cols=161 Identities=13% Similarity=0.077 Sum_probs=92.1
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcC---C-CCEEEEEcCCCCCCCCCCCchhHHHhh----hcCcccccccChHh-
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNS---N-HPFLWIIRPDLVTGETADMPSEFEVKA----KETGFIARWCPQEE- 261 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~---~-~~~iw~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~pq~~- 261 (388)
+..+++..|++.. .+.+..+++++... + .+++ .+|... ..+.+.+.. .+|+.+.+|+|+.+
T Consensus 228 ~~~~i~~~G~l~~--~kg~~~li~a~~~l~~~~~~~l~-ivG~g~-------~~~~l~~~~~~~~l~~v~f~G~~~~~~~ 297 (412)
T PRK10307 228 GKKIVLYSGNIGE--KQGLELVIDAARRLRDRPDLIFV-ICGQGG-------GKARLEKMAQCRGLPNVHFLPLQPYDRL 297 (412)
T ss_pred CCEEEEEcCcccc--ccCHHHHHHHHHHhccCCCeEEE-EECCCh-------hHHHHHHHHHHcCCCceEEeCCCCHHHH
Confidence 3466667788653 23344455555432 2 3444 344321 112222211 24677789988654
Q ss_pred --hhcCCCcceeeeccCc------hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHH
Q 047540 262 --VLNHPAVGGFFTHSGW------NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKL 333 (388)
Q Consensus 262 --~L~~~~~~~~IthgG~------~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~a 333 (388)
+++.+++.++.+..+. +.+.|++++|+|+|+....+.. ....+ + +.|+.+ + .-+.+++.++
T Consensus 298 ~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i-~--~~G~~~-----~-~~d~~~la~~ 366 (412)
T PRK10307 298 PALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLV-E--GIGVCV-----E-PESVEALVAA 366 (412)
T ss_pred HHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHH-h--CCcEEe-----C-CCCHHHHHHH
Confidence 7889998655555442 2368999999999998754321 11233 3 688888 3 3568899999
Q ss_pred HHHHHcCchH-HHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q 047540 334 VRELMEGEKG-MQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPVI 379 (388)
Q Consensus 334 i~~vl~~~~~-~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~ 379 (388)
|.++++|++. +.+++++++.. .+.-+......++++.+.
T Consensus 367 i~~l~~~~~~~~~~~~~a~~~~-------~~~fs~~~~~~~~~~~~~ 406 (412)
T PRK10307 367 IAALARQALLRPKLGTVAREYA-------ERTLDKENVLRQFIADIR 406 (412)
T ss_pred HHHHHhCHHHHHHHHHHHHHHH-------HHHcCHHHHHHHHHHHHH
Confidence 9999988741 33444444432 223444444455544443
No 62
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.03 E-value=0.00088 Score=64.16 Aligned_cols=131 Identities=18% Similarity=0.165 Sum_probs=80.8
Q ss_pred CCcEEEeeCCCcc-CCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCCCCCCCchhHHH----hhhcCcccccccChHh---
Q 047540 191 NSVVYVNFGSSVY-LTKQQLTEVAMGLVNS-NHPFLWIIRPDLVTGETADMPSEFEV----KAKETGFIARWCPQEE--- 261 (388)
Q Consensus 191 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~pq~~--- 261 (388)
++.+++..|+... ...+.+...+..+... +..++ .+|... ....+.+ ...+++.+.+++++.+
T Consensus 219 ~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~-i~G~~~-------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 290 (394)
T cd03794 219 DKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFL-IVGDGP-------EKEELKELAKALGLDNVTFLGRVPKEELPE 290 (394)
T ss_pred CcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEE-EeCCcc-------cHHHHHHHHHHcCCCcEEEeCCCChHHHHH
Confidence 4677777888653 2234444444444433 34444 344321 1122222 1235778888988654
Q ss_pred hhcCCCcceeeeccC---------chhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHH
Q 047540 262 VLNHPAVGGFFTHSG---------WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEK 332 (388)
Q Consensus 262 ~L~~~~~~~~IthgG---------~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ 332 (388)
++..+++ +|.... -+++.||+++|+|+|+.+..+.+.. + ...+.|..+ + .-+.+++.+
T Consensus 291 ~~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~----~-~~~~~g~~~-----~-~~~~~~l~~ 357 (394)
T cd03794 291 LLAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL----V-EEAGAGLVV-----P-PGDPEALAA 357 (394)
T ss_pred HHHhhCe--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh----h-ccCCcceEe-----C-CCCHHHHHH
Confidence 7788888 554322 2347999999999999887654433 2 333677787 3 237899999
Q ss_pred HHHHHHcCch
Q 047540 333 LVRELMEGEK 342 (388)
Q Consensus 333 ai~~vl~~~~ 342 (388)
+|.+++.|++
T Consensus 358 ~i~~~~~~~~ 367 (394)
T cd03794 358 AILELLDDPE 367 (394)
T ss_pred HHHHHHhChH
Confidence 9999998775
No 63
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.02 E-value=0.0052 Score=58.66 Aligned_cols=83 Identities=16% Similarity=0.200 Sum_probs=56.5
Q ss_pred hcCcccc-cccChH---hhhcCCCcceeeec-c--C-chhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeec
Q 047540 248 KETGFIA-RWCPQE---EVLNHPAVGGFFTH-S--G-WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNS 319 (388)
Q Consensus 248 ~~~~~v~-~~~pq~---~~L~~~~~~~~Ith-g--G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 319 (388)
.+++.+. .|+|+. .++..+++-++-++ . | -++++||+++|+|+|+-+..+ ...+ ...+.|..+
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i-~~~~~g~~~--- 316 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEV-LDGGTGLLV--- 316 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-----hhee-eeCCCcEEE---
Confidence 3466655 458764 37788888222222 1 3 357899999999999977644 2233 345778877
Q ss_pred CCCCCCCHHHHHHHHHHHHcCch
Q 047540 320 GDDNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 320 ~~~~~~~~~~l~~ai~~vl~~~~ 342 (388)
+ .-+.+++.+++.+++++++
T Consensus 317 --~-~~d~~~~~~~l~~l~~~~~ 336 (366)
T cd03822 317 --P-PGDPAALAEAIRRLLADPE 336 (366)
T ss_pred --c-CCCHHHHHHHHHHHHcChH
Confidence 3 2468899999999999864
No 64
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.02 E-value=0.014 Score=55.36 Aligned_cols=135 Identities=14% Similarity=0.076 Sum_probs=80.7
Q ss_pred CCcEEEeeCCCcc-CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHh-----hhcCcccccccChHh---
Q 047540 191 NSVVYVNFGSSVY-LTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVK-----AKETGFIARWCPQEE--- 261 (388)
Q Consensus 191 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~pq~~--- 261 (388)
+..+++..|+... ...+.+-..++.+.+.+..+.+.+.+... ....+.+. ..+++.+.+++++.+
T Consensus 201 ~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 274 (377)
T cd03798 201 DKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGP------LREALEALAAELGLEDRVTFLGAVPHEEVPA 274 (377)
T ss_pred CceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCc------chHHHHHHHHhcCCcceEEEeCCCCHHHHHH
Confidence 4667777787653 22333444444444332334333332211 01112111 245778899998754
Q ss_pred hhcCCCcceeeec--cCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHc
Q 047540 262 VLNHPAVGGFFTH--SGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELME 339 (388)
Q Consensus 262 ~L~~~~~~~~Ith--gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~ 339 (388)
++..+++.++.++ +.-+++.||+++|+|+|+-+..+ ....+ +..+.|..+ ..-+.+++.++|.++++
T Consensus 275 ~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~-~~~~~g~~~------~~~~~~~l~~~i~~~~~ 343 (377)
T cd03798 275 YYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEII-TDGENGLLV------PPGDPEALAEAILRLLA 343 (377)
T ss_pred HHHhcCeeecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHh-cCCcceeEE------CCCCHHHHHHHHHHHhc
Confidence 7788887322222 33467999999999999876533 33445 555667777 34578899999999999
Q ss_pred Cch
Q 047540 340 GEK 342 (388)
Q Consensus 340 ~~~ 342 (388)
+..
T Consensus 344 ~~~ 346 (377)
T cd03798 344 DPW 346 (377)
T ss_pred CcH
Confidence 875
No 65
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.01 E-value=0.0036 Score=59.13 Aligned_cols=135 Identities=16% Similarity=0.071 Sum_probs=80.1
Q ss_pred CCcEEEeeCCCccC-CHHHHHHHHHHHhcC--CCCEEEEEcCCCCCCCCCCCchhHHHh--hhcCcccccccChH-hhhc
Q 047540 191 NSVVYVNFGSSVYL-TKQQLTEVAMGLVNS--NHPFLWIIRPDLVTGETADMPSEFEVK--AKETGFIARWCPQE-EVLN 264 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~-~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~pq~-~~L~ 264 (388)
++.+++..|+.... ..+.+.+.++.+.+. +..+++. |....... ........ ...++.+.++..+. .++.
T Consensus 187 ~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~-G~~~~~~~---~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 262 (359)
T cd03808 187 DDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLV-GDGDEENP---AAILEIEKLGLEGRVEFLGFRDDVPELLA 262 (359)
T ss_pred CCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEE-cCCCcchh---hHHHHHHhcCCcceEEEeeccccHHHHHH
Confidence 46788888886532 334444455555432 3444444 33221110 00000111 13456667765554 4888
Q ss_pred CCCcceeeeccC----chhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 265 HPAVGGFFTHSG----WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 265 ~~~~~~~IthgG----~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
.+++ +|..+. -++++||+.+|+|+|+-+..+ ....+ +..+.|..+ + .-+.+++.++|.+++.+
T Consensus 263 ~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i-~~~~~g~~~-----~-~~~~~~~~~~i~~l~~~ 329 (359)
T cd03808 263 AADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAV-IDGVNGFLV-----P-PGDAEALADAIERLIED 329 (359)
T ss_pred hccE--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhh-hcCcceEEE-----C-CCCHHHHHHHHHHHHhC
Confidence 8888 665432 367999999999999965433 33444 445678888 3 34688999999999988
Q ss_pred ch
Q 047540 341 EK 342 (388)
Q Consensus 341 ~~ 342 (388)
++
T Consensus 330 ~~ 331 (359)
T cd03808 330 PE 331 (359)
T ss_pred HH
Confidence 75
No 66
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=97.99 E-value=0.0014 Score=64.45 Aligned_cols=83 Identities=16% Similarity=0.147 Sum_probs=59.1
Q ss_pred cCcccccccChHh---hhcCCCcceeeec-cCc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCC
Q 047540 249 ETGFIARWCPQEE---VLNHPAVGGFFTH-SGW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDN 323 (388)
Q Consensus 249 ~~~~v~~~~pq~~---~L~~~~~~~~Ith-gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 323 (388)
+++.+.+++|+.+ +|..+++-++.+. .|. .+++||+++|+|+|+... ......+ +.-..|..+ +
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i-~~~~~G~lv-----~- 349 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVI-TDGENGLLV-----D- 349 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhc-ccCCceEEc-----C-
Confidence 5677889998765 6778888333333 222 478999999999998643 3344444 443568877 3
Q ss_pred CCCHHHHHHHHHHHHcCch
Q 047540 324 QVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 324 ~~~~~~l~~ai~~vl~~~~ 342 (388)
.-+.+++.++|.++++|++
T Consensus 350 ~~d~~~la~~i~~ll~~~~ 368 (396)
T cd03818 350 FFDPDALAAAVIELLDDPA 368 (396)
T ss_pred CCCHHHHHHHHHHHHhCHH
Confidence 3468999999999999875
No 67
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=97.99 E-value=0.0037 Score=58.75 Aligned_cols=82 Identities=17% Similarity=0.265 Sum_probs=56.9
Q ss_pred cCcccccccCh-HhhhcCCCcceeeecc---C-chhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCC
Q 047540 249 ETGFIARWCPQ-EEVLNHPAVGGFFTHS---G-WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDN 323 (388)
Q Consensus 249 ~~~~v~~~~pq-~~~L~~~~~~~~Ithg---G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 323 (388)
.++.+.++.+. ..++..+++ +|... | -++++||+++|+|+|+.+..+.+.. +.+....|..+ +
T Consensus 235 ~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~----~~~~~~~g~~~-----~- 302 (348)
T cd03820 235 DRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSE----IIEDGVNGLLV-----P- 302 (348)
T ss_pred CeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchHh----hhccCcceEEe-----C-
Confidence 45556666444 348888888 66554 2 3579999999999998765443322 32332378888 3
Q ss_pred CCCHHHHHHHHHHHHcCch
Q 047540 324 QVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 324 ~~~~~~l~~ai~~vl~~~~ 342 (388)
.-+.+++.++|.++++|++
T Consensus 303 ~~~~~~~~~~i~~ll~~~~ 321 (348)
T cd03820 303 NGDVEALAEALLRLMEDEE 321 (348)
T ss_pred CCCHHHHHHHHHHHHcCHH
Confidence 3567899999999999886
No 68
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.91 E-value=0.0097 Score=57.44 Aligned_cols=92 Identities=14% Similarity=0.144 Sum_probs=62.2
Q ss_pred cCcccccccChH-hhhcCCCcceeeecc---C-chhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCC
Q 047540 249 ETGFIARWCPQE-EVLNHPAVGGFFTHS---G-WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDN 323 (388)
Q Consensus 249 ~~~~v~~~~pq~-~~L~~~~~~~~Ithg---G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 323 (388)
+++.+.++.++. .++..+++ +|.-. | -.++.||+++|+|+|+.... ..+..+ ++-..|..+ +
T Consensus 253 ~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i-~~~~~G~~~-----~- 319 (371)
T cd04962 253 DDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVV-KHGETGFLV-----D- 319 (371)
T ss_pred ceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCCC----Cchhhh-cCCCceEEc-----C-
Confidence 456677777664 48888888 55322 3 35899999999999996543 344455 444578777 3
Q ss_pred CCCHHHHHHHHHHHHcCchH-HHHHHHHHHH
Q 047540 324 QVGRNEVEKLVRELMEGEKG-MQMRNKASEW 353 (388)
Q Consensus 324 ~~~~~~l~~ai~~vl~~~~~-~~~~~~a~~l 353 (388)
.-+.+++.+++.++++++.. +.+++++++.
T Consensus 320 ~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 350 (371)
T cd04962 320 VGDVEAMAEYALSLLEDDELWQEFSRAARNR 350 (371)
T ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 24788999999999987752 3345554443
No 69
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=97.90 E-value=0.0059 Score=58.55 Aligned_cols=82 Identities=15% Similarity=0.090 Sum_probs=58.4
Q ss_pred hcCcccccccC-hH---hhhcCCCcceeeeccC----chhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeec
Q 047540 248 KETGFIARWCP-QE---EVLNHPAVGGFFTHSG----WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNS 319 (388)
Q Consensus 248 ~~~~~v~~~~p-q~---~~L~~~~~~~~IthgG----~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 319 (388)
..++...+|++ +. .+++.+++ +|.... -++++||+++|+|+|+.... .....+ ...+.|..+
T Consensus 243 ~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~----~~~e~~-~~~~~g~~~--- 312 (365)
T cd03825 243 PFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVG----GIPDIV-DHGVTGYLA--- 312 (365)
T ss_pred CCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCC----CChhhe-eCCCceEEe---
Confidence 44677788888 43 37888888 776543 36899999999999986542 222233 333577777
Q ss_pred CCCCCCCHHHHHHHHHHHHcCch
Q 047540 320 GDDNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 320 ~~~~~~~~~~l~~ai~~vl~~~~ 342 (388)
+ ..+.+++.+++.+++++++
T Consensus 313 --~-~~~~~~~~~~l~~l~~~~~ 332 (365)
T cd03825 313 --K-PGDPEDLAEGIEWLLADPD 332 (365)
T ss_pred --C-CCCHHHHHHHHHHHHhCHH
Confidence 3 3578899999999998875
No 70
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.85 E-value=0.0059 Score=60.11 Aligned_cols=79 Identities=14% Similarity=0.164 Sum_probs=58.6
Q ss_pred cCcccccccChHh-hhcCCCcceee--ec--cCc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC
Q 047540 249 ETGFIARWCPQEE-VLNHPAVGGFF--TH--SGW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD 322 (388)
Q Consensus 249 ~~~~v~~~~pq~~-~L~~~~~~~~I--th--gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 322 (388)
+++.+.+++++.. ++..+++ || ++ .|. +.+.||+++|+|+|+.+...+. +.+..|.|..+ .
T Consensus 280 ~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~------i~~~~~~g~lv-----~ 346 (397)
T TIGR03087 280 PGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEG------IDALPGAELLV-----A 346 (397)
T ss_pred CCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCccccc------ccccCCcceEe-----C
Confidence 5677888888754 8888988 55 33 355 3699999999999998864322 11234678777 4
Q ss_pred CCCCHHHHHHHHHHHHcCch
Q 047540 323 NQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 323 ~~~~~~~l~~ai~~vl~~~~ 342 (388)
-+.+++.++|.++++|++
T Consensus 347 --~~~~~la~ai~~ll~~~~ 364 (397)
T TIGR03087 347 --ADPADFAAAILALLANPA 364 (397)
T ss_pred --CCHHHHHHHHHHHHcCHH
Confidence 578999999999998875
No 71
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.85 E-value=0.003 Score=61.34 Aligned_cols=99 Identities=16% Similarity=0.189 Sum_probs=67.4
Q ss_pred hcCcccccccChHh-hhcCCCcceeeecc-C-chhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCC
Q 047540 248 KETGFIARWCPQEE-VLNHPAVGGFFTHS-G-WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQ 324 (388)
Q Consensus 248 ~~~~~v~~~~pq~~-~L~~~~~~~~Ithg-G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 324 (388)
.+++.+.++.++.. ++..+++-++.++. | -.+++||+++|+|+|+...... ....+ +.-..|..+ + .
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g---~~~~v-~~~~~G~lv-----~-~ 329 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYG---PSEII-EDGENGYLV-----P-K 329 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCC---cHHHc-ccCCCceEe-----C-C
Confidence 34566677766654 88999985555553 3 3589999999999999654321 23334 444678888 3 3
Q ss_pred CCHHHHHHHHHHHHcCch-HHHHHHHHHHHHHH
Q 047540 325 VGRNEVEKLVRELMEGEK-GMQMRNKASEWKRF 356 (388)
Q Consensus 325 ~~~~~l~~ai~~vl~~~~-~~~~~~~a~~l~~~ 356 (388)
-+.+++.++|.+++++++ .+.+.+++++..+.
T Consensus 330 ~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~ 362 (372)
T cd04949 330 GDIEALAEAIIELLNDPKLLQKFSEAAYENAER 362 (372)
T ss_pred CcHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 578999999999999874 24466666555443
No 72
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.76 E-value=0.0091 Score=61.04 Aligned_cols=285 Identities=12% Similarity=0.092 Sum_probs=140.6
Q ss_pred HHHHHHhc-cccHHHHHHHHHhhcCCCCccEEEE-cC--CcchHHHHHHHhCC--CeEEEccCchhHHHHhhhhcccccC
Q 047540 17 LFESITNN-VMLQPFLDLLQKLKSSSNSVSCIIS-DG--FMPFTVTAAQQLGI--PIALFFTIAARSFKGCMQLRTLEEN 90 (388)
Q Consensus 17 ~~~~~~~~-~~~~~~~~ll~~l~~~~~~~D~iI~-D~--~~~~~~~~A~~lgI--P~v~~~~~~~~~~~~~~~~~~~~~~ 90 (388)
+.|.+... ...+.++++.+.+.++ +||++|. |. |..-.+-.+++.|+ |++-+. + ...|.+.+.
T Consensus 285 ~~EVL~~l~~l~~~~~~l~~~i~~~--kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYV--s-------PqVWAWR~~ 353 (608)
T PRK01021 285 FWEVLLALFKLWYRYRKLYKTILKT--NPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYV--C-------PSIWAWRPK 353 (608)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEE--C-------ccceeeCcc
Confidence 45554332 1444555666666665 9999887 76 34445556788896 977652 1 111111110
Q ss_pred CCCCcccccchhHHHHHHHHHHhhccCCeEEEcChhhhhHHHHHHHHhhCCCceecC-CcccchhhccccCCCCCCCCCC
Q 047540 91 TTLTSLIDLNSYATRVAIEAAKNAAKASAVVIHTFDALERQVLDALSAMFPNLFTIG-PLQLLLNQINEQGGNSLSSTGY 169 (388)
Q Consensus 91 ~~~pr~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~~~~~~~p~~~~vG-pl~~~~~~~~~~~~~~~~~~~~ 169 (388)
+ .+... +-.|.+++ ...+|.+.+. ...-++.+|| |+.-.-. ..+
T Consensus 354 --------R----ikki~------k~vD~ll~--IfPFE~~~y~---~~gv~v~yVGHPL~d~i~-----------~~~- 398 (608)
T PRK01021 354 --------R----KTILE------KYLDLLLL--ILPFEQNLFK---DSPLRTVYLGHPLVETIS-----------SFS- 398 (608)
T ss_pred --------h----HHHHH------HHhhhhee--cCccCHHHHH---hcCCCeEEECCcHHhhcc-----------cCC-
Confidence 0 11111 11222222 3345655433 4445799999 6642110 000
Q ss_pred CCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHh--cC--CCCEEEEEcCCCCCCCCCCCchhHHH
Q 047540 170 KYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLV--NS--NHPFLWIIRPDLVTGETADMPSEFEV 245 (388)
Q Consensus 170 ~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~--~~--~~~~iw~~~~~~~~~~~~~~~~~~~~ 245 (388)
+.++..+-+...+ ++++|-+-.||...-=...+..++++.+ .. ..+|+....... ..+.+.+
T Consensus 399 ------~~~~~r~~lgl~~-~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~~l~fvvp~a~~~-------~~~~i~~ 464 (608)
T PRK01021 399 ------PNLSWKEQLHLPS-DKPIVAAFPGSRRGDILRNLTIQVQAFLASSLASTHQLLVSSANPK-------YDHLILE 464 (608)
T ss_pred ------CHHHHHHHcCCCC-CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhccCeEEEEecCchh-------hHHHHHH
Confidence 1223344444444 5689999999965432344555666665 33 344544322110 0111222
Q ss_pred hhhc-C---cccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCC-ccchhHhHHHHhh----hhceeEEe
Q 047540 246 KAKE-T---GFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPF-LGDQATNCRYTCN----EWGVGMDI 316 (388)
Q Consensus 246 ~~~~-~---~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~-~~DQ~~na~~v~~----~~G~G~~l 316 (388)
...+ + +.+..--...++++.+++ .+.-+|. .++|+..+|+|||++=- ..=-+.-++++++ ..+.--.+
T Consensus 465 ~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSGT-aTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNII 541 (608)
T PRK01021 465 VLQQEGCLHSHIVPSQFRYELMRECDC--ALAKCGT-IVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNII 541 (608)
T ss_pred HHhhcCCCCeEEecCcchHHHHHhcCe--eeecCCH-HHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHh
Confidence 1211 1 122110012468888887 6666654 47899999999998432 2222334566533 11111111
Q ss_pred eecCC--------CCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHH
Q 047540 317 TNSGD--------DNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSAT 369 (388)
Q Consensus 317 ~~~~~--------~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~ 369 (388)
. .++ .++++++.|.+++ +.|.|++ ++++.++--+.+++.+.+|-.+-+
T Consensus 542 a-gr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~---~r~~~~~~l~~lr~~Lg~~~~~~~ 597 (608)
T PRK01021 542 L-GSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQ---SKEKQKDACRDLYQAMNESASTMK 597 (608)
T ss_pred c-CCCcchhhcCCcccCCHHHHHHHH-HHhcCHH---HHHHHHHHHHHHHHHhcCCCCCHH
Confidence 0 000 1367899999997 8888875 444444433444444445555533
No 73
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=97.76 E-value=0.019 Score=56.99 Aligned_cols=86 Identities=15% Similarity=0.253 Sum_probs=59.0
Q ss_pred ccccChHh---hhcCCCcceeee----ccC--c-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCC
Q 047540 254 ARWCPQEE---VLNHPAVGGFFT----HSG--W-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDN 323 (388)
Q Consensus 254 ~~~~pq~~---~L~~~~~~~~It----hgG--~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 323 (388)
.+|+|..+ +|+.+++ +|. .-| . ++++||+++|+|+|+.... .....+ ++-+.|..+ +
T Consensus 300 ~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~----~~~eiv-~~~~~G~lv-----~- 366 (415)
T cd03816 300 TPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK----CIDELV-KHGENGLVF-----G- 366 (415)
T ss_pred cCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCCC----CHHHHh-cCCCCEEEE-----C-
Confidence 46887654 7888998 553 112 3 4699999999999996532 333444 665789888 4
Q ss_pred CCCHHHHHHHHHHHHcC---ch-HHHHHHHHHHHH
Q 047540 324 QVGRNEVEKLVRELMEG---EK-GMQMRNKASEWK 354 (388)
Q Consensus 324 ~~~~~~l~~ai~~vl~~---~~-~~~~~~~a~~l~ 354 (388)
+.+++.++|.++++| ++ .+.|.+++++..
T Consensus 367 --d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 367 --DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred --CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 689999999999998 43 234555554443
No 74
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=97.75 E-value=0.038 Score=60.16 Aligned_cols=93 Identities=15% Similarity=0.210 Sum_probs=61.0
Q ss_pred cCcccccccChHh---hhcCCC--cceeeecc---Cc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeec
Q 047540 249 ETGFIARWCPQEE---VLNHPA--VGGFFTHS---GW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNS 319 (388)
Q Consensus 249 ~~~~v~~~~pq~~---~L~~~~--~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 319 (388)
+++.+.+++++.+ ++..++ ..+||.-. |+ .+++||+++|+|+|+-...+ ....+ +.-..|+.+
T Consensus 548 g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII-~~g~nGlLV--- 619 (1050)
T TIGR02468 548 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIH-RVLDNGLLV--- 619 (1050)
T ss_pred CeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHh-ccCCcEEEE---
Confidence 4566677877754 565552 12377643 44 47899999999999986533 22223 434578888
Q ss_pred CCCCCCCHHHHHHHHHHHHcCchH-HHHHHHHHH
Q 047540 320 GDDNQVGRNEVEKLVRELMEGEKG-MQMRNKASE 352 (388)
Q Consensus 320 ~~~~~~~~~~l~~ai~~vl~~~~~-~~~~~~a~~ 352 (388)
+ .-+.++|+++|.++++|++. +.|.+++.+
T Consensus 620 --d-P~D~eaLA~AL~~LL~Dpelr~~m~~~gr~ 650 (1050)
T TIGR02468 620 --D-PHDQQAIADALLKLVADKQLWAECRQNGLK 650 (1050)
T ss_pred --C-CCCHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 4 35788999999999998762 334444443
No 75
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.75 E-value=0.021 Score=55.49 Aligned_cols=78 Identities=18% Similarity=0.255 Sum_probs=62.4
Q ss_pred eeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCchH-HHHHHH
Q 047540 271 FFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEKG-MQMRNK 349 (388)
Q Consensus 271 ~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~-~~~~~~ 349 (388)
|+.+||+| .+|.+++|+|+|.=|+...|..-++++ .+.|+|+.+ + +++.+.+++...+.|+.. +.|.++
T Consensus 327 lv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l-~~~ga~~~v-----~---~~~~l~~~v~~l~~~~~~r~~~~~~ 396 (419)
T COG1519 327 LVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERL-LQAGAGLQV-----E---DADLLAKAVELLLADEDKREAYGRA 396 (419)
T ss_pred ccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHH-HhcCCeEEE-----C---CHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 45688887 889999999999999999999999999 678999999 3 378899999888887652 445555
Q ss_pred HHHHHHHHH
Q 047540 350 ASEWKRFAE 358 (388)
Q Consensus 350 a~~l~~~~~ 358 (388)
+.++=...+
T Consensus 397 ~~~~v~~~~ 405 (419)
T COG1519 397 GLEFLAQNR 405 (419)
T ss_pred HHHHHHHhh
Confidence 555555444
No 76
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=97.72 E-value=0.014 Score=57.45 Aligned_cols=91 Identities=16% Similarity=0.192 Sum_probs=63.0
Q ss_pred cCcccccccChHh---hhcCCCcceeee---ccCc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCC
Q 047540 249 ETGFIARWCPQEE---VLNHPAVGGFFT---HSGW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGD 321 (388)
Q Consensus 249 ~~~~v~~~~pq~~---~L~~~~~~~~It---hgG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 321 (388)
+++.+.+++++.+ +|+.+++ +|. +-|+ .+++||+++|+|+|+....+ ....+ ++-..|..+
T Consensus 283 ~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i-~~~~~g~~~----- 350 (405)
T TIGR03449 283 DRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAV-ADGETGLLV----- 350 (405)
T ss_pred ceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhh-ccCCceEEC-----
Confidence 5678888888653 7888888 553 2244 47999999999999966532 33344 454678887
Q ss_pred CCCCCHHHHHHHHHHHHcCchH-HHHHHHHHH
Q 047540 322 DNQVGRNEVEKLVRELMEGEKG-MQMRNKASE 352 (388)
Q Consensus 322 ~~~~~~~~l~~ai~~vl~~~~~-~~~~~~a~~ 352 (388)
+ .-+.+++.++|.+++++++. +.+++++++
T Consensus 351 ~-~~d~~~la~~i~~~l~~~~~~~~~~~~~~~ 381 (405)
T TIGR03449 351 D-GHDPADWADALARLLDDPRTRIRMGAAAVE 381 (405)
T ss_pred C-CCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 3 24788999999999988641 234444443
No 77
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.70 E-value=0.001 Score=65.95 Aligned_cols=111 Identities=15% Similarity=0.151 Sum_probs=72.3
Q ss_pred cCcccccccChHh---hhcCCCcceeeeccC----chhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCC
Q 047540 249 ETGFIARWCPQEE---VLNHPAVGGFFTHSG----WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGD 321 (388)
Q Consensus 249 ~~~~v~~~~pq~~---~L~~~~~~~~IthgG----~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 321 (388)
+++.+.+|+++.+ ++..+++.+||..+- -++++||+++|+|+|+-... .....+ +..+.|..+
T Consensus 289 ~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vg----g~~e~i-~~~~~G~l~----- 358 (407)
T cd04946 289 ISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVG----GTPEIV-DNGGNGLLL----- 358 (407)
T ss_pred ceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCC----CcHHHh-cCCCcEEEe-----
Confidence 3566789999764 555544445776553 35799999999999986533 244455 553489888
Q ss_pred CCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHH
Q 047540 322 DNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLE 375 (388)
Q Consensus 322 ~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v 375 (388)
...-+.+++.++|.++++|++ . ..++++..++.+.+.-+......+|+
T Consensus 359 ~~~~~~~~la~~I~~ll~~~~---~---~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 359 SKDPTPNELVSSLSKFIDNEE---E---YQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred CCCCCHHHHHHHHHHHHhCHH---H---HHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 555678999999999998765 2 22334444444444555555555543
No 78
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=97.63 E-value=0.013 Score=56.27 Aligned_cols=137 Identities=18% Similarity=0.142 Sum_probs=80.4
Q ss_pred chHHHHHhcCCCCCCCcEEEeeCCCcc----CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcc
Q 047540 177 ETECLQWLDSKELPNSVVYVNFGSSVY----LTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGF 252 (388)
Q Consensus 177 ~~~l~~~l~~~~~~~~~v~vs~Gs~~~----~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (388)
+.++.+-+... +++.|++-+-+..+ .....+.++++.|++.+..+|...+... .++ ..++. ++.
T Consensus 167 d~~vl~~lg~~--~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~-------~~~-~~~~~--~~~ 234 (335)
T PF04007_consen 167 DPEVLKELGLD--DEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYED-------QRE-LFEKY--GVI 234 (335)
T ss_pred ChhHHHHcCCC--CCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcc-------hhh-HHhcc--Ccc
Confidence 34455555522 36888888877421 2335577899999988877554433221 111 11111 122
Q ss_pred c-ccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHH
Q 047540 253 I-ARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVE 331 (388)
Q Consensus 253 v-~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~ 331 (388)
+ ..-++-.++|.++++ ||+-|| ....||...|+|.|.+ +-++-...-+.+.+ .|. .. +..+.+++.
T Consensus 235 i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~-~Gl--l~------~~~~~~ei~ 301 (335)
T PF04007_consen 235 IPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIE-KGL--LY------HSTDPDEIV 301 (335)
T ss_pred ccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHH-CCC--eE------ecCCHHHHH
Confidence 2 333455689999998 999666 6678999999999974 22232223344524 454 43 335666777
Q ss_pred HHHHHHH
Q 047540 332 KLVRELM 338 (388)
Q Consensus 332 ~ai~~vl 338 (388)
+.+++.+
T Consensus 302 ~~v~~~~ 308 (335)
T PF04007_consen 302 EYVRKNL 308 (335)
T ss_pred HHHHHhh
Confidence 6665544
No 79
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=97.63 E-value=0.03 Score=53.49 Aligned_cols=149 Identities=11% Similarity=0.064 Sum_probs=83.0
Q ss_pred CCcEEEeeCCCccC-CHHHHHHHHHHHhcC--CCCEEEEEcCCCCCCCCCCCchhHH---H--hhhcCcccccccChH-h
Q 047540 191 NSVVYVNFGSSVYL-TKQQLTEVAMGLVNS--NHPFLWIIRPDLVTGETADMPSEFE---V--KAKETGFIARWCPQE-E 261 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~-~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~~~~~~~~---~--~~~~~~~v~~~~pq~-~ 261 (388)
+..+++..|..... ..+.+.+.+..+.+. +..+++ +|...... .+...+. . ...+++.+.+|.++. .
T Consensus 184 ~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~i-vG~~~~~~---~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 259 (355)
T cd03819 184 GKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLI-VGDAQGRR---FYYAELLELIKRLGLQDRVTFVGHCSDMPA 259 (355)
T ss_pred CceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEE-EECCcccc---hHHHHHHHHHHHcCCcceEEEcCCcccHHH
Confidence 45667777776532 345555555566553 334443 33321110 0111111 1 123567778885554 4
Q ss_pred hhcCCCcceeeec--cCc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHH
Q 047540 262 VLNHPAVGGFFTH--SGW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELM 338 (388)
Q Consensus 262 ~L~~~~~~~~Ith--gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl 338 (388)
+|..+++.++-++ -|+ ++++||+++|+|+|+....+ ....+ ..-+.|..+ + .-+.+++.++|.+++
T Consensus 260 ~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~----~~e~i-~~~~~g~~~-----~-~~~~~~l~~~i~~~~ 328 (355)
T cd03819 260 AYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG----ARETV-RPGETGLLV-----P-PGDAEALAQALDQIL 328 (355)
T ss_pred HHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC----cHHHH-hCCCceEEe-----C-CCCHHHHHHHHHHHH
Confidence 8888888333331 233 58999999999999865432 23344 444578888 3 358889999997665
Q ss_pred c-Cch-HHHHHHHHHHHH
Q 047540 339 E-GEK-GMQMRNKASEWK 354 (388)
Q Consensus 339 ~-~~~-~~~~~~~a~~l~ 354 (388)
. +++ .+.+++++++..
T Consensus 329 ~~~~~~~~~~~~~a~~~~ 346 (355)
T cd03819 329 SLLPEGRAKMFAKARMCV 346 (355)
T ss_pred hhCHHHHHHHHHHHHHHH
Confidence 4 443 233444544443
No 80
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.63 E-value=0.00048 Score=62.94 Aligned_cols=146 Identities=12% Similarity=0.120 Sum_probs=104.0
Q ss_pred CcEEEeeCCCccCCH-HHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhh--hcCcccccccChHh-hhcCCC
Q 047540 192 SVVYVNFGSSVYLTK-QQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKA--KETGFIARWCPQEE-VLNHPA 267 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~pq~~-~L~~~~ 267 (388)
--|+|++|-. ++ +...+++..|.+.++.+-.++++... -......+. .+|..+......+. ++..++
T Consensus 159 r~ilI~lGGs---Dpk~lt~kvl~~L~~~~~nl~iV~gs~~p------~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d 229 (318)
T COG3980 159 RDILITLGGS---DPKNLTLKVLAELEQKNVNLHIVVGSSNP------TLKNLRKRAEKYPNINLYIDTNDMAELMKEAD 229 (318)
T ss_pred heEEEEccCC---ChhhhHHHHHHHhhccCeeEEEEecCCCc------chhHHHHHHhhCCCeeeEecchhHHHHHHhcc
Confidence 4588888763 34 46777899998888777777773321 123333333 34555555555555 888888
Q ss_pred cceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCchHHHHH
Q 047540 268 VGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEKGMQMR 347 (388)
Q Consensus 268 ~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~ 347 (388)
+ .|+-+|. |+.|++..|+|.+++|+...|---|+.. +.+|+-..+ +-.++.+.....+.++++|.. .|
T Consensus 230 ~--aI~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f-~~lg~~~~l-----~~~l~~~~~~~~~~~i~~d~~---~r 297 (318)
T COG3980 230 L--AISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEF-EALGIIKQL-----GYHLKDLAKDYEILQIQKDYA---RR 297 (318)
T ss_pred h--heeccch-HHHHHHHhcCCceEEeeeccHHHHHHHH-HhcCchhhc-----cCCCchHHHHHHHHHhhhCHH---Hh
Confidence 8 8887775 8999999999999999999999999999 778887777 523777777777888888876 56
Q ss_pred HHHHHHHHHHH
Q 047540 348 NKASEWKRFAE 358 (388)
Q Consensus 348 ~~a~~l~~~~~ 358 (388)
++.....+.+-
T Consensus 298 k~l~~~~~~i~ 308 (318)
T COG3980 298 KNLSFGSKLIG 308 (318)
T ss_pred hhhhhccceee
Confidence 66555444433
No 81
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.63 E-value=0.018 Score=58.58 Aligned_cols=149 Identities=9% Similarity=0.080 Sum_probs=84.0
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhc----CCCCEEEEEcCCCCCCCCCCCchhHHHhh-----hcCcccccccChHhh
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVN----SNHPFLWIIRPDLVTGETADMPSEFEVKA-----KETGFIARWCPQEEV 262 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~----~~~~~iw~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~pq~~~ 262 (388)
+.++++.|.+.. .+.+..+++|+.. .+.--+..+|... ..+.+.+.. .+++.+.++.+-..+
T Consensus 319 ~~~il~vGrl~~--~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~-------~~~~l~~~i~~~~l~~~V~f~G~~~~~~~ 389 (500)
T TIGR02918 319 PFSIITASRLAK--EKHIDWLVKAVVKAKKSVPELTFDIYGEGG-------EKQKLQKIINENQAQDYIHLKGHRNLSEV 389 (500)
T ss_pred CeEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEEEEEECch-------hHHHHHHHHHHcCCCCeEEEcCCCCHHHH
Confidence 456666777642 3444555555532 2222233455332 112222221 345666778777789
Q ss_pred hcCCCcceeeec---cCc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCC-CCC-HHHHHHHHHH
Q 047540 263 LNHPAVGGFFTH---SGW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDN-QVG-RNEVEKLVRE 336 (388)
Q Consensus 263 L~~~~~~~~Ith---gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~-~~~-~~~l~~ai~~ 336 (388)
+..+++ ||.- =|+ .+++||+++|+|+|+....+ .+...+ +.-..|..+....+.. .-+ .++++++|.+
T Consensus 390 ~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI-~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ 463 (500)
T TIGR02918 390 YKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFI-EDNKNGYLIPIDEEEDDEDQIITALAEKIVE 463 (500)
T ss_pred HHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHc-cCCCCEEEEeCCccccchhHHHHHHHHHHHH
Confidence 999888 6642 344 57999999999999966431 123334 4434688882111001 112 7889999999
Q ss_pred HHcCchHHHHHHHHHHHHH
Q 047540 337 LMEGEKGMQMRNKASEWKR 355 (388)
Q Consensus 337 vl~~~~~~~~~~~a~~l~~ 355 (388)
+++++..+.|.+++.+.++
T Consensus 464 ll~~~~~~~~~~~a~~~a~ 482 (500)
T TIGR02918 464 YFNSNDIDAFHEYSYQIAE 482 (500)
T ss_pred HhChHHHHHHHHHHHHHHH
Confidence 9965443456666665443
No 82
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=97.58 E-value=0.013 Score=57.12 Aligned_cols=91 Identities=12% Similarity=0.134 Sum_probs=62.3
Q ss_pred hcCcccccccChHh---hhcCCCcceeeecc---Cc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecC
Q 047540 248 KETGFIARWCPQEE---VLNHPAVGGFFTHS---GW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSG 320 (388)
Q Consensus 248 ~~~~~v~~~~pq~~---~L~~~~~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 320 (388)
.+++.+.+++|+.+ +|..+++ +|... |. .+++||+++|+|+|+.-..+ ....+ ..-+.|..+
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i-~~~~~g~~~---- 347 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETV-VDGETGFLC---- 347 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHh-ccCCceEEe----
Confidence 45778899998764 7888888 55322 22 46899999999999965432 33344 444678777
Q ss_pred CCCCCCHHHHHHHHHHHHcCchH-HHHHHHHHH
Q 047540 321 DDNQVGRNEVEKLVRELMEGEKG-MQMRNKASE 352 (388)
Q Consensus 321 ~~~~~~~~~l~~ai~~vl~~~~~-~~~~~~a~~ 352 (388)
+ .+.+++.++|.+++++++. +.+.+++++
T Consensus 348 -~--~~~~~~a~~i~~l~~~~~~~~~~~~~a~~ 377 (392)
T cd03805 348 -E--PTPEEFAEAMLKLANDPDLADRMGAAGRK 377 (392)
T ss_pred -C--CCHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 4 2688999999999998752 334444443
No 83
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.56 E-value=0.019 Score=58.03 Aligned_cols=82 Identities=13% Similarity=0.202 Sum_probs=56.7
Q ss_pred hcCcccccccChHhhhcCCCcceeeecc---Cc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhh------ceeEEee
Q 047540 248 KETGFIARWCPQEEVLNHPAVGGFFTHS---GW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEW------GVGMDIT 317 (388)
Q Consensus 248 ~~~~~v~~~~pq~~~L~~~~~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~------G~G~~l~ 317 (388)
.+++.+.+..+-.++++.+++ +|... |. ++++||+++|+|+|+-.. ......+ +.. ..|..+
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~----g~~~elv-~~~~~~~~g~~G~lv- 424 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDV----GSCRELI-EGADDEALGPAGEVV- 424 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCC----CChHHHh-cCCcccccCCceEEE-
Confidence 356777775445568888887 55433 33 579999999999999543 2333334 431 268787
Q ss_pred ecCCCCCCCHHHHHHHHHHHHcCch
Q 047540 318 NSGDDNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 318 ~~~~~~~~~~~~l~~ai~~vl~~~~ 342 (388)
+ ..+.+++.++|.++++|++
T Consensus 425 ----~-~~d~~~la~ai~~ll~~~~ 444 (475)
T cd03813 425 ----P-PADPEALARAILRLLKDPE 444 (475)
T ss_pred ----C-CCCHHHHHHHHHHHhcCHH
Confidence 3 3578999999999999875
No 84
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.56 E-value=0.002 Score=55.18 Aligned_cols=145 Identities=17% Similarity=0.152 Sum_probs=84.5
Q ss_pred CCCcEEEeeCCCccC-CHHHHHHHHHHHhc--CCCCEEEEEcCCCCCCCCCCCchhHHHh--hhcCcccccccChH---h
Q 047540 190 PNSVVYVNFGSSVYL-TKQQLTEVAMGLVN--SNHPFLWIIRPDLVTGETADMPSEFEVK--AKETGFIARWCPQE---E 261 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~-~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~pq~---~ 261 (388)
+++.+++..|..... ....+-.++.-+.. .+.-.++.+|...... .-....+. .++++.+.++.++. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 88 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKK----ELKNLIEKLNLKENIIFLGYVPDDELDE 88 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHH----HHHHHHHHTTCGTTEEEEESHSHHHHHH
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccccc----cccccccccccccccccccccccccccc
Confidence 457777778886542 23333333333322 2333444555111000 00011111 24577778888732 3
Q ss_pred hhcCCCcceeeec----cCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHH
Q 047540 262 VLNHPAVGGFFTH----SGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVREL 337 (388)
Q Consensus 262 ~L~~~~~~~~Ith----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~v 337 (388)
++..+++ +|+. +.-.++.||+.+|+|+|+.. ...+...+ .....|..+ +.. +.+++.++|.++
T Consensus 89 ~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~-~~~~~g~~~-----~~~-~~~~l~~~i~~~ 155 (172)
T PF00534_consen 89 LYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEII-NDGVNGFLF-----DPN-DIEELADAIEKL 155 (172)
T ss_dssp HHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHS-GTTTSEEEE-----STT-SHHHHHHHHHHH
T ss_pred cccccee--ccccccccccccccccccccccceeecc----ccCCceee-ccccceEEe-----CCC-CHHHHHHHHHHH
Confidence 8888888 7765 34568999999999999744 44455555 555679999 543 999999999999
Q ss_pred HcCchH-HHHHHHHH
Q 047540 338 MEGEKG-MQMRNKAS 351 (388)
Q Consensus 338 l~~~~~-~~~~~~a~ 351 (388)
+++++. +.+.++++
T Consensus 156 l~~~~~~~~l~~~~~ 170 (172)
T PF00534_consen 156 LNDPELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HCCHHHHHHHHHHhc
Confidence 988752 23444443
No 85
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.53 E-value=0.04 Score=51.70 Aligned_cols=82 Identities=11% Similarity=0.139 Sum_probs=54.1
Q ss_pred hcCcccccccChH-hhhcCCCcceeeec---cC-chhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC
Q 047540 248 KETGFIARWCPQE-EVLNHPAVGGFFTH---SG-WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD 322 (388)
Q Consensus 248 ~~~~~v~~~~pq~-~~L~~~~~~~~Ith---gG-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 322 (388)
.+++.+.++.++. .+++.+++ +|.- -| -++++||+++|+|+|+-... .....+ +..+.|..+ +
T Consensus 245 ~~~v~~~g~~~~~~~~~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i-~~~~~g~~~-----~ 312 (353)
T cd03811 245 ADRVHFLGFQSNPYPYLKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREIL-EDGENGLLV-----P 312 (353)
T ss_pred CccEEEecccCCHHHHHHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHh-cCCCceEEE-----C
Confidence 3566777777664 48888888 5532 23 35799999999999986543 344555 556788888 3
Q ss_pred CCCCHHHH---HHHHHHHHcCch
Q 047540 323 NQVGRNEV---EKLVRELMEGEK 342 (388)
Q Consensus 323 ~~~~~~~l---~~ai~~vl~~~~ 342 (388)
.-+.+.+ .+++.+.+.+++
T Consensus 313 -~~~~~~~~~~~~~i~~~~~~~~ 334 (353)
T cd03811 313 -VGDEAALAAAALALLDLLLDPE 334 (353)
T ss_pred -CCCHHHHHHHHHHHHhccCChH
Confidence 3456666 455555555554
No 86
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=97.51 E-value=0.062 Score=56.67 Aligned_cols=81 Identities=17% Similarity=0.181 Sum_probs=56.7
Q ss_pred hcCcccccccChHh-hhcCCCcceeee---ccCc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC
Q 047540 248 KETGFIARWCPQEE-VLNHPAVGGFFT---HSGW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD 322 (388)
Q Consensus 248 ~~~~~v~~~~pq~~-~L~~~~~~~~It---hgG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 322 (388)
.+++.+.+|.++.. +|..+++ ||. +-|+ ++++||+.+|+|+|+.... .....+ +.-..|+.+ +
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV-~dg~~GlLv-----~ 640 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAV-QEGVTGLTL-----P 640 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHc-cCCCCEEEe-----C
Confidence 35677788877654 8888888 554 4555 6789999999999997653 233444 543479998 5
Q ss_pred -CCCCHHHHHHHHHHHHcC
Q 047540 323 -NQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 323 -~~~~~~~l~~ai~~vl~~ 340 (388)
.+.+.+++.+++.+++.+
T Consensus 641 ~~d~~~~~La~aL~~ll~~ 659 (694)
T PRK15179 641 ADTVTAPDVAEALARIHDM 659 (694)
T ss_pred CCCCChHHHHHHHHHHHhC
Confidence 456667777777776653
No 87
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=97.50 E-value=0.018 Score=56.19 Aligned_cols=130 Identities=14% Similarity=0.126 Sum_probs=75.7
Q ss_pred CCcEEEeeCCCc--c-CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhh--hcCccccccc---ChHhh
Q 047540 191 NSVVYVNFGSSV--Y-LTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKA--KETGFIARWC---PQEEV 262 (388)
Q Consensus 191 ~~~v~vs~Gs~~--~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~---pq~~~ 262 (388)
++.|+|.+=-.. . ...+.+..+++++.+.+.++++......... ..+-+.+.+.. .+++.+.+-+ ....+
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p~~--~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~L 278 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADAGS--RIINEAIEEYVNEHPNFRLFKSLGQERYLSL 278 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCCCc--hHHHHHHHHHhcCCCCEEEECCCChHHHHHH
Confidence 467777764432 2 3356789999999887766665543221000 00011111111 2466665544 44558
Q ss_pred hcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHc
Q 047540 263 LNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELME 339 (388)
Q Consensus 263 L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~ 339 (388)
++++++ +||-++.+ +.||.+.|+|+|.+- +-+ . . .+.|.-+.+ -..+.++|.++++++++
T Consensus 279 l~~a~~--vitdSSgg-i~EA~~lg~Pvv~l~---~R~---e-~-~~~g~nvl~------vg~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 279 LKNADA--VIGNSSSG-IIEAPSFGVPTINIG---TRQ---K-G-RLRADSVID------VDPDKEEIVKAIEKLLD 338 (365)
T ss_pred HHhCCE--EEEcChhH-HHhhhhcCCCEEeec---CCc---h-h-hhhcCeEEE------eCCCHHHHHHHHHHHhC
Confidence 889998 99877544 499999999999763 211 1 1 123433332 13578899999999543
No 88
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.50 E-value=0.0055 Score=60.12 Aligned_cols=84 Identities=12% Similarity=0.171 Sum_probs=60.4
Q ss_pred hhcCcccccccChHh---hhcCCCcceeeecc----Cc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeee
Q 047540 247 AKETGFIARWCPQEE---VLNHPAVGGFFTHS----GW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITN 318 (388)
Q Consensus 247 ~~~~~~v~~~~pq~~---~L~~~~~~~~Ithg----G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~ 318 (388)
...++.+.+++|+.+ +|+.+++ ||... |. .+++||+++|+|+|+....+ +...+ +.-..|..+
T Consensus 255 l~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv-~~~~~G~~l-- 325 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFV-LEGITGYHL-- 325 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhc-ccCCceEEE--
Confidence 345677788888654 6888888 66433 33 56789999999999977532 33344 444568755
Q ss_pred cCCCCCCCHHHHHHHHHHHHcCch
Q 047540 319 SGDDNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 319 ~~~~~~~~~~~l~~ai~~vl~~~~ 342 (388)
....+.+++.++|.++++|++
T Consensus 326 ---~~~~d~~~la~~I~~ll~d~~ 346 (380)
T PRK15484 326 ---AEPMTSDSIISDINRTLADPE 346 (380)
T ss_pred ---eCCCCHHHHHHHHHHHHcCHH
Confidence 344678999999999999876
No 89
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.49 E-value=0.0045 Score=61.36 Aligned_cols=82 Identities=13% Similarity=0.246 Sum_probs=60.1
Q ss_pred hcCcccccccChHh---hhcCCCcceeeec---------cCc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeE
Q 047540 248 KETGFIARWCPQEE---VLNHPAVGGFFTH---------SGW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGM 314 (388)
Q Consensus 248 ~~~~~v~~~~pq~~---~L~~~~~~~~Ith---------gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~ 314 (388)
.+++.+.+|+|+.+ ++..+++ ||.- -|. ++++||+++|+|+|+-...+ ....+ +.-..|.
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v-~~~~~G~ 350 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELV-EADKSGW 350 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhh-cCCCceE
Confidence 35677899999865 7788888 6542 244 56899999999999975432 33344 4445788
Q ss_pred EeeecCCCCCCCHHHHHHHHHHHHc-Cch
Q 047540 315 DITNSGDDNQVGRNEVEKLVRELME-GEK 342 (388)
Q Consensus 315 ~l~~~~~~~~~~~~~l~~ai~~vl~-~~~ 342 (388)
.+ + .-+.+++.++|.++++ |++
T Consensus 351 lv-----~-~~d~~~la~ai~~l~~~d~~ 373 (406)
T PRK15427 351 LV-----P-ENDAQALAQRLAAFSQLDTD 373 (406)
T ss_pred Ee-----C-CCCHHHHHHHHHHHHhCCHH
Confidence 88 3 3578899999999998 765
No 90
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.46 E-value=0.0018 Score=61.66 Aligned_cols=82 Identities=15% Similarity=0.151 Sum_probs=57.9
Q ss_pred hcCcccccccChHh---hhcCCCcceeeec-cC-chhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC
Q 047540 248 KETGFIARWCPQEE---VLNHPAVGGFFTH-SG-WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD 322 (388)
Q Consensus 248 ~~~~~v~~~~pq~~---~L~~~~~~~~Ith-gG-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 322 (388)
.+++.+.+|+++.+ ++..+++-++-++ .| -+++.||+++|+|+|+.+.. .....+ .. +.|... +
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~~~~-~~-~~~~~~-----~ 329 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKV----PWQELI-EY-GCGWVV-----D 329 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCC----CHHHHh-hc-CceEEe-----C
Confidence 46778899999654 6788888332232 23 35799999999999997643 234444 44 788877 4
Q ss_pred CCCCHHHHHHHHHHHHcCch
Q 047540 323 NQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 323 ~~~~~~~l~~ai~~vl~~~~ 342 (388)
. +.+++.++|.+++++++
T Consensus 330 ~--~~~~~~~~i~~l~~~~~ 347 (375)
T cd03821 330 D--DVDALAAALRRALELPQ 347 (375)
T ss_pred C--ChHHHHHHHHHHHhCHH
Confidence 3 34899999999998864
No 91
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.44 E-value=0.024 Score=54.07 Aligned_cols=132 Identities=11% Similarity=0.111 Sum_probs=75.6
Q ss_pred CCcEEEeeCCCccC-CHHHHHHHHHHHhcCC--CCEEEEEcCCCCCCCCCCCchhHH-----HhhhcCcccccccChHh-
Q 047540 191 NSVVYVNFGSSVYL-TKQQLTEVAMGLVNSN--HPFLWIIRPDLVTGETADMPSEFE-----VKAKETGFIARWCPQEE- 261 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~-~~~~~~~~~~al~~~~--~~~iw~~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~pq~~- 261 (388)
+..+++..|+.... ..+.+.+.+..+...+ ..+++.-..... ..... ....+++.+.+++|+.+
T Consensus 194 ~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~-------~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 266 (365)
T cd03809 194 PRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWL-------NEELLARLRELGLGDRVRFLGYVSDEEL 266 (365)
T ss_pred CCCeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccc-------cHHHHHHHHHcCCCCeEEECCCCChhHH
Confidence 34566677876532 2344444444444333 454444322211 11111 12356788899998764
Q ss_pred --hhcCCCcceeeec--cCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHH
Q 047540 262 --VLNHPAVGGFFTH--SGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVREL 337 (388)
Q Consensus 262 --~L~~~~~~~~Ith--gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~v 337 (388)
++..+++-++-+. +.-+++.||+++|+|+|+-...+ ....+ . ..|..+ . .-+.+++.++|.++
T Consensus 267 ~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~-~--~~~~~~-----~-~~~~~~~~~~i~~l 333 (365)
T cd03809 267 AALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVA-G--DAALYF-----D-PLDPEALAAAIERL 333 (365)
T ss_pred HHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCC----cccee-c--Cceeee-----C-CCCHHHHHHHHHHH
Confidence 7788887322222 12357999999999999855421 11222 3 245555 3 23788999999999
Q ss_pred HcCch
Q 047540 338 MEGEK 342 (388)
Q Consensus 338 l~~~~ 342 (388)
++|++
T Consensus 334 ~~~~~ 338 (365)
T cd03809 334 LEDPA 338 (365)
T ss_pred hcCHH
Confidence 98876
No 92
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.41 E-value=0.003 Score=62.88 Aligned_cols=137 Identities=17% Similarity=0.233 Sum_probs=76.7
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhh------hcCcccccccChHh--
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKA------KETGFIARWCPQEE-- 261 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~pq~~-- 261 (388)
++.++|.+|.+....+++.+...++-|++.+...+|....+... ...+..+. ++++.+.++.++.+
T Consensus 283 ~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~------~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl 356 (468)
T PF13844_consen 283 EDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASG------EARLRRRFAAHGVDPDRIIFSPVAPREEHL 356 (468)
T ss_dssp SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTH------HHHHHHHHHHTTS-GGGEEEEE---HHHHH
T ss_pred CCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHH------HHHHHHHHHHcCCChhhEEEcCCCCHHHHH
Confidence 46899999999999999999999999999999999998744210 11122111 35566677767654
Q ss_pred -hhcCCCcceee---eccCchhHHHHHhhCCcEEecCCcc-chhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHH
Q 047540 262 -VLNHPAVGGFF---THSGWNSTIESLCAGVPMICWPFLG-DQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRE 336 (388)
Q Consensus 262 -~L~~~~~~~~I---thgG~~s~~eal~~GvP~i~~P~~~-DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ 336 (388)
.+...++ ++ ..+|.+|++|||+.|||+|.+|--. =...-+..+ ..+|+.-.+ - -+.++-.+.--+
T Consensus 357 ~~~~~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL-~~lGl~ElI-----A--~s~~eYv~~Av~ 426 (468)
T PF13844_consen 357 RRYQLADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASIL-RALGLPELI-----A--DSEEEYVEIAVR 426 (468)
T ss_dssp HHGGG-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHH-HHHT-GGGB--------SSHHHHHHHHHH
T ss_pred HHhhhCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHH-HHcCCchhc-----C--CCHHHHHHHHHH
Confidence 3455665 55 3568899999999999999999432 222333444 667887766 2 244443333335
Q ss_pred HHcCch
Q 047540 337 LMEGEK 342 (388)
Q Consensus 337 vl~~~~ 342 (388)
+-+|.+
T Consensus 427 La~D~~ 432 (468)
T PF13844_consen 427 LATDPE 432 (468)
T ss_dssp HHH-HH
T ss_pred HhCCHH
Confidence 556655
No 93
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=97.34 E-value=0.0065 Score=57.59 Aligned_cols=79 Identities=15% Similarity=0.240 Sum_probs=54.9
Q ss_pred cCcccccccChH-hhhcCCCcceeeeccCc----hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCC
Q 047540 249 ETGFIARWCPQE-EVLNHPAVGGFFTHSGW----NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDN 323 (388)
Q Consensus 249 ~~~~v~~~~pq~-~~L~~~~~~~~IthgG~----~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 323 (388)
+++.+.+..++. .+++.+++ +|..+.. +++.||+++|+|+|+... ..+...+ .. .|..+ +
T Consensus 251 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~-~~--~g~~~-----~- 315 (365)
T cd03807 251 DKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELV-GD--TGFLV-----P- 315 (365)
T ss_pred ceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHh-hc--CCEEe-----C-
Confidence 345555544443 48888888 7765443 689999999999998543 3344445 43 66666 3
Q ss_pred CCCHHHHHHHHHHHHcCch
Q 047540 324 QVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 324 ~~~~~~l~~ai~~vl~~~~ 342 (388)
.-+.+++.++|.+++++++
T Consensus 316 ~~~~~~l~~~i~~l~~~~~ 334 (365)
T cd03807 316 PGDPEALAEAIEALLADPA 334 (365)
T ss_pred CCCHHHHHHHHHHHHhChH
Confidence 2368899999999998864
No 94
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.33 E-value=0.00082 Score=54.55 Aligned_cols=106 Identities=15% Similarity=0.166 Sum_probs=67.5
Q ss_pred EEEeeCCCccCCHHHHHH--HHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCc-ccccc--cCh-HhhhcCCC
Q 047540 194 VYVNFGSSVYLTKQQLTE--VAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETG-FIARW--CPQ-EEVLNHPA 267 (388)
Q Consensus 194 v~vs~Gs~~~~~~~~~~~--~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~--~pq-~~~L~~~~ 267 (388)
+||+-||....-...+.. +..-.+....++|..+|.... .| -|+ .+.+| .+- +.+.+.++
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d~------kp--------vagl~v~~F~~~~kiQsli~dar 67 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGDI------KP--------VAGLRVYGFDKEEKIQSLIHDAR 67 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCCc------cc--------ccccEEEeechHHHHHHHhhcce
Confidence 688889974211122222 222222234578888886432 11 122 44443 343 34777788
Q ss_pred cceeeeccCchhHHHHHhhCCcEEecCCc--------cchhHhHHHHhhhhceeEEe
Q 047540 268 VGGFFTHSGWNSTIESLCAGVPMICWPFL--------GDQATNCRYTCNEWGVGMDI 316 (388)
Q Consensus 268 ~~~~IthgG~~s~~eal~~GvP~i~~P~~--------~DQ~~na~~v~~~~G~G~~l 316 (388)
+ +|+|||.||++.++..++|.|++|-. .+|..-|..+ .+.+.=+..
T Consensus 68 I--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~kl-ae~~~vv~~ 121 (161)
T COG5017 68 I--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKL-AEINYVVAC 121 (161)
T ss_pred E--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHH-HhcCceEEE
Confidence 7 99999999999999999999999963 3577788888 455665555
No 95
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=97.30 E-value=0.0045 Score=59.18 Aligned_cols=136 Identities=13% Similarity=0.123 Sum_probs=79.5
Q ss_pred CCcEEEeeCCCcc-CCHHHHHHHHHHHhcC--CCCEEEEEcCCCCCCCCCCCchhHHHh--hhcCcccccccChHh---h
Q 047540 191 NSVVYVNFGSSVY-LTKQQLTEVAMGLVNS--NHPFLWIIRPDLVTGETADMPSEFEVK--AKETGFIARWCPQEE---V 262 (388)
Q Consensus 191 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~pq~~---~ 262 (388)
++.+++.+|+... ...+.+...+..+... +..+++.-.+... ..+ ..+.++ .++++.+.+++|+.+ +
T Consensus 178 ~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~----~~~-~~~~~~~~~~~~v~~~g~~~~~~l~~~ 252 (355)
T cd03799 178 EPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPLR----DEL-EALIAELGLEDRVTLLGAKSQEEVREL 252 (355)
T ss_pred CCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCccH----HHH-HHHHHHcCCCCeEEECCcCChHHHHHH
Confidence 4566777787642 2234444444444443 3344443322210 000 111111 246788899997654 7
Q ss_pred hcCCCcceeeecc-------C-chhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHH
Q 047540 263 LNHPAVGGFFTHS-------G-WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLV 334 (388)
Q Consensus 263 L~~~~~~~~Ithg-------G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai 334 (388)
+..+++.++-+.. | -++++||+++|+|+|+.+..+ ....+ +....|..+ + .-+.+++.++|
T Consensus 253 ~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i-~~~~~g~~~-----~-~~~~~~l~~~i 321 (355)
T cd03799 253 LRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELV-EDGETGLLV-----P-PGDPEALADAI 321 (355)
T ss_pred HHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhh-hCCCceEEe-----C-CCCHHHHHHHH
Confidence 7888883332232 2 367999999999999976532 22233 443478888 3 24889999999
Q ss_pred HHHHcCch
Q 047540 335 RELMEGEK 342 (388)
Q Consensus 335 ~~vl~~~~ 342 (388)
.++++++.
T Consensus 322 ~~~~~~~~ 329 (355)
T cd03799 322 ERLLDDPE 329 (355)
T ss_pred HHHHhCHH
Confidence 99998875
No 96
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.30 E-value=0.0037 Score=60.79 Aligned_cols=81 Identities=12% Similarity=0.193 Sum_probs=55.8
Q ss_pred cCcccccccCh-HhhhcCCCcceee--ec-cC-chhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCC
Q 047540 249 ETGFIARWCPQ-EEVLNHPAVGGFF--TH-SG-WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDN 323 (388)
Q Consensus 249 ~~~~v~~~~pq-~~~L~~~~~~~~I--th-gG-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 323 (388)
+++.+.++..+ ..++..+++ +| ++ -| -++++||+++|+|+|+-...+ +...+ +.-..|..+ +
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i-~~~~~g~~~-----~- 321 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELV-QHGVTGALV-----P- 321 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHh-cCCCceEEe-----C-
Confidence 34455555444 358888988 55 33 23 358999999999999976533 34444 444568887 3
Q ss_pred CCCHHHHHHHHHHHHcCch
Q 047540 324 QVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 324 ~~~~~~l~~ai~~vl~~~~ 342 (388)
.-+.+++.++|.+++++++
T Consensus 322 ~~d~~~la~~i~~l~~~~~ 340 (374)
T TIGR03088 322 PGDAVALARALQPYVSDPA 340 (374)
T ss_pred CCCHHHHHHHHHHHHhCHH
Confidence 3577899999999998765
No 97
>PLN00142 sucrose synthase
Probab=97.25 E-value=0.067 Score=56.96 Aligned_cols=61 Identities=16% Similarity=0.276 Sum_probs=40.3
Q ss_pred eeec---cCch-hHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHH----HcCch
Q 047540 271 FFTH---SGWN-STIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVREL----MEGEK 342 (388)
Q Consensus 271 ~Ith---gG~~-s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~v----l~~~~ 342 (388)
||.- =|.| +++||+++|+|+|+-...+ ....| +.-..|..+ +. -+.+++.++|.++ +.|++
T Consensus 670 fVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV-~dG~tG~LV-----~P-~D~eaLA~aI~~lLekLl~Dp~ 738 (815)
T PLN00142 670 FVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEII-VDGVSGFHI-----DP-YHGDEAANKIADFFEKCKEDPS 738 (815)
T ss_pred EEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHh-cCCCcEEEe-----CC-CCHHHHHHHHHHHHHHhcCCHH
Confidence 6653 3443 7999999999999865432 33344 543569888 42 4677777777665 45654
No 98
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.24 E-value=0.036 Score=53.28 Aligned_cols=166 Identities=13% Similarity=0.070 Sum_probs=87.0
Q ss_pred HHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHH---HHh-c-CCCCEEEEEcCCCCCCCCCCCchhHHHh-hhcCc-c
Q 047540 180 CLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAM---GLV-N-SNHPFLWIIRPDLVTGETADMPSEFEVK-AKETG-F 252 (388)
Q Consensus 180 l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~---al~-~-~~~~~iw~~~~~~~~~~~~~~~~~~~~~-~~~~~-~ 252 (388)
..+-+.... +.+++.+-.||..+--...+..+.+ .+. + .+.+|+..+..... ...... ...+. .
T Consensus 178 ar~~l~~~~-~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~~--------~~~~~~~~~~~~~~ 248 (381)
T COG0763 178 AREKLGIDA-DEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAKY--------RRIIEEALKWEVAG 248 (381)
T ss_pred HHHHhCCCC-CCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHHH--------HHHHHHHhhccccC
Confidence 444454444 5699999999975422222333333 343 2 33566655442210 111111 11111 1
Q ss_pred ccccc-ChH--hhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCc-cchhHhHHHHhhhhceeE--EeeecC---C--
Q 047540 253 IARWC-PQE--EVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFL-GDQATNCRYTCNEWGVGM--DITNSG---D-- 321 (388)
Q Consensus 253 v~~~~-pq~--~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~-~DQ~~na~~v~~~~G~G~--~l~~~~---~-- 321 (388)
..-++ ++. +++..+++ .+.-+|. -++|+..+|+|||+.=-. .=-+..+++.+.-.=+++ .+. .+ +
T Consensus 249 ~~~~~~~~~~~~a~~~aD~--al~aSGT-~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~-~~~ivPEl 324 (381)
T COG0763 249 LSLILIDGEKRKAFAAADA--ALAASGT-ATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILA-GREIVPEL 324 (381)
T ss_pred ceEEecCchHHHHHHHhhH--HHHhccH-HHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhc-CCccchHH
Confidence 22222 222 36777776 5555554 378999999999874211 112334455422211111 000 00 0
Q ss_pred -CCCCCHHHHHHHHHHHHcCch-HHHHHHHHHHHHHHHH
Q 047540 322 -DNQVGRNEVEKLVRELMEGEK-GMQMRNKASEWKRFAE 358 (388)
Q Consensus 322 -~~~~~~~~l~~ai~~vl~~~~-~~~~~~~a~~l~~~~~ 358 (388)
.++++++.|.+++.+++.|+. .+.+++....+++.++
T Consensus 325 iq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~ 363 (381)
T COG0763 325 IQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLR 363 (381)
T ss_pred HhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHc
Confidence 247889999999999999883 3457777777777766
No 99
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.22 E-value=0.012 Score=57.15 Aligned_cols=130 Identities=16% Similarity=0.207 Sum_probs=79.3
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcCC--CCEEEEEcCCCCCCCCCCCchhHHH---h--hhcCcccccccCh--H--
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNSN--HPFLWIIRPDLVTGETADMPSEFEV---K--AKETGFIARWCPQ--E-- 260 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~--~~~iw~~~~~~~~~~~~~~~~~~~~---~--~~~~~~v~~~~pq--~-- 260 (388)
+.+++..|.......+.+..+++++.... ..++ .+|... ..+.+.+ . .++++.+.+|.++ .
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~-ivG~g~-------~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~ 251 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLH-IIGDGS-------DFEKCKAYSRELGIEQRIIWHGWQSQPWEVV 251 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEE-EEeCCc-------cHHHHHHHHHHcCCCCeEEEecccCCcHHHH
Confidence 56667777764323344666777776553 3333 344321 1112221 1 2457778888754 2
Q ss_pred -hhhcCCCcceeeecc---C-chhHHHHHhhCCcEEecC-CccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHH
Q 047540 261 -EVLNHPAVGGFFTHS---G-WNSTIESLCAGVPMICWP-FLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLV 334 (388)
Q Consensus 261 -~~L~~~~~~~~Ithg---G-~~s~~eal~~GvP~i~~P-~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai 334 (388)
+.+..+++ +|... | -.++.||+++|+|+|+.- ..+ ....+ +.-..|..+ + .-+.+++.++|
T Consensus 252 ~~~~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv-~~~~~G~lv-----~-~~d~~~la~~i 318 (359)
T PRK09922 252 QQKIKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDII-KPGLNGELY-----T-PGNIDEFVGKL 318 (359)
T ss_pred HHHHhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHc-cCCCceEEE-----C-CCCHHHHHHHH
Confidence 24556676 55432 2 368999999999999875 322 11233 554578888 3 35889999999
Q ss_pred HHHHcCch
Q 047540 335 RELMEGEK 342 (388)
Q Consensus 335 ~~vl~~~~ 342 (388)
.+++++++
T Consensus 319 ~~l~~~~~ 326 (359)
T PRK09922 319 NKVISGEV 326 (359)
T ss_pred HHHHhCcc
Confidence 99999886
No 100
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=97.18 E-value=0.21 Score=53.23 Aligned_cols=79 Identities=14% Similarity=0.151 Sum_probs=48.7
Q ss_pred cCccccccc-Ch---HhhhcC-CC-cceeeecc---Cc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeee
Q 047540 249 ETGFIARWC-PQ---EEVLNH-PA-VGGFFTHS---GW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITN 318 (388)
Q Consensus 249 ~~~~v~~~~-pq---~~~L~~-~~-~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~ 318 (388)
+++.+.++. +. ..++.+ ++ .++||.-+ |. .+++||+++|+|+|+--.. .....| +.-..|..+
T Consensus 619 g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G----G~~EiV-~dg~tGfLV-- 691 (784)
T TIGR02470 619 GQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG----GPLEII-QDGVSGFHI-- 691 (784)
T ss_pred CeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHh-cCCCcEEEe--
Confidence 455555553 32 234542 21 12377533 33 4789999999999986543 234444 444579999
Q ss_pred cCCCCCCCHHHHHHHHHHHH
Q 047540 319 SGDDNQVGRNEVEKLVRELM 338 (388)
Q Consensus 319 ~~~~~~~~~~~l~~ai~~vl 338 (388)
+. -+.+++.++|.+++
T Consensus 692 ---dp-~D~eaLA~aL~~ll 707 (784)
T TIGR02470 692 ---DP-YHGEEAAEKIVDFF 707 (784)
T ss_pred ---CC-CCHHHHHHHHHHHH
Confidence 42 46788999988876
No 101
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=97.18 E-value=0.0097 Score=57.99 Aligned_cols=133 Identities=13% Similarity=0.136 Sum_probs=76.3
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcC--CCCEEEEEcCCCCCCCCCCCchhHHHhh---h---cCcc-cccccChHh-
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNS--NHPFLWIIRPDLVTGETADMPSEFEVKA---K---ETGF-IARWCPQEE- 261 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~~~~~~~~~~~---~---~~~~-v~~~~pq~~- 261 (388)
..+++..|.... .+.+..+++++... +..+++..++..... +-+.+.+.. . .++. +.+++++.+
T Consensus 201 ~~~i~~~Grl~~--~Kg~~~li~a~~~l~~~~~l~i~g~g~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 274 (388)
T TIGR02149 201 RPYILFVGRITR--QKGVPHLLDAVHYIPKDVQVVLCAGAPDTPE----VAEEVRQAVALLDRNRTGIIWINKMLPKEEL 274 (388)
T ss_pred ceEEEEEccccc--ccCHHHHHHHHHHHhhcCcEEEEeCCCCcHH----HHHHHHHHHHHhccccCceEEecCCCCHHHH
Confidence 445666677542 24455566666554 455555544332110 111111111 1 1233 345676543
Q ss_pred --hhcCCCcceeeecc---Cc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC-CCC----CHHHH
Q 047540 262 --VLNHPAVGGFFTHS---GW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD-NQV----GRNEV 330 (388)
Q Consensus 262 --~L~~~~~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~----~~~~l 330 (388)
++..+++ ||.-. |. .+++||+++|+|+|+.... .....+ +.-..|..+ + .+. ..+++
T Consensus 275 ~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i-~~~~~G~~~-----~~~~~~~~~~~~~l 342 (388)
T TIGR02149 275 VELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVV-VDGETGFLV-----PPDNSDADGFQAEL 342 (388)
T ss_pred HHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHh-hCCCceEEc-----CCCCCcccchHHHH
Confidence 7888888 66432 32 4679999999999996643 344445 544678888 3 222 23889
Q ss_pred HHHHHHHHcCch
Q 047540 331 EKLVRELMEGEK 342 (388)
Q Consensus 331 ~~ai~~vl~~~~ 342 (388)
.++|.++++|++
T Consensus 343 ~~~i~~l~~~~~ 354 (388)
T TIGR02149 343 AKAINILLADPE 354 (388)
T ss_pred HHHHHHHHhCHH
Confidence 999999998875
No 102
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.16 E-value=0.0096 Score=56.97 Aligned_cols=78 Identities=10% Similarity=0.121 Sum_probs=54.0
Q ss_pred cCcccccccChH-hhhcCCCcceeeeccC----chhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCC
Q 047540 249 ETGFIARWCPQE-EVLNHPAVGGFFTHSG----WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDN 323 (388)
Q Consensus 249 ~~~~v~~~~pq~-~~L~~~~~~~~IthgG----~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 323 (388)
+++.+.++..+. .+|+.+++ +|.-.. -++++||+++|+|+|+. |...+...+ +. .|..+ .
T Consensus 245 ~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i-~~--~g~~~-----~- 309 (360)
T cd04951 245 NRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVV-GD--SGLIV-----P- 309 (360)
T ss_pred CcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEe-cC--CceEe-----C-
Confidence 466677776553 48888888 555432 36789999999999974 334444555 43 55566 3
Q ss_pred CCCHHHHHHHHHHHHcCc
Q 047540 324 QVGRNEVEKLVRELMEGE 341 (388)
Q Consensus 324 ~~~~~~l~~ai~~vl~~~ 341 (388)
.-+.+++.+++.+++++.
T Consensus 310 ~~~~~~~~~~i~~ll~~~ 327 (360)
T cd04951 310 ISDPEALANKIDEILKMS 327 (360)
T ss_pred CCCHHHHHHHHHHHHhCC
Confidence 257889999999998543
No 103
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=96.99 E-value=0.0022 Score=52.58 Aligned_cols=127 Identities=19% Similarity=0.209 Sum_probs=66.1
Q ss_pred cEEEeeCCCcc-CCHHHHHH-HHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChH-hhhcCCCcc
Q 047540 193 VVYVNFGSSVY-LTKQQLTE-VAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQE-EVLNHPAVG 269 (388)
Q Consensus 193 ~v~vs~Gs~~~-~~~~~~~~-~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~-~~L~~~~~~ 269 (388)
+.++++|+... ...+.+.+ +++.+.+....+-+.+-+. .|+.+.+...+|+.+.+|+++. ++++.+++.
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~--------~~~~l~~~~~~~v~~~g~~~e~~~~l~~~dv~ 74 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGN--------GPDELKRLRRPNVRFHGFVEELPEILAAADVG 74 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECE--------SS-HHCCHHHCTEEEE-S-HHHHHHHHC-SEE
T ss_pred ccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeC--------CHHHHHHhcCCCEEEcCCHHHHHHHHHhCCEE
Confidence 44556666543 23343333 5555654333343333222 1222222124588889998653 388899996
Q ss_pred eeeec--cCc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 270 GFFTH--SGW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 270 ~~Ith--gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
+..+. .|. +++.|++.+|+|+|+.+.. ....+ +..+.|..+ . -+.+++.++|.++++|
T Consensus 75 l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~-~~~~~~~~~-----~--~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 75 LIPSRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIV-EEDGCGVLV-----A--NDPEELAEAIERLLND 135 (135)
T ss_dssp EE-BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS----SEEEE------T--T-HHHHHHHHHHHHH-
T ss_pred EEEeeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhhe-eecCCeEEE-----C--CCHHHHHHHHHHHhcC
Confidence 65543 233 7899999999999997761 12222 445777776 2 4889999999998865
No 104
>PLN02501 digalactosyldiacylglycerol synthase
Probab=96.99 E-value=0.12 Score=53.80 Aligned_cols=76 Identities=16% Similarity=0.086 Sum_probs=51.6
Q ss_pred cccccccChH-hhhcCCCcceeeecc---Cc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCC
Q 047540 251 GFIARWCPQE-EVLNHPAVGGFFTHS---GW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQV 325 (388)
Q Consensus 251 ~~v~~~~pq~-~~L~~~~~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 325 (388)
+.+.++.++. +++..+++ ||.-+ |. ++++||+++|+|+|+...-+... + .. |.+..+ . -
T Consensus 603 V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V-~~-g~nGll-----~--~ 666 (794)
T PLN02501 603 LNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----F-RS-FPNCLT-----Y--K 666 (794)
T ss_pred EEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----E-ee-cCCeEe-----c--C
Confidence 4446666655 48888888 77633 33 57899999999999977654221 2 32 333333 2 3
Q ss_pred CHHHHHHHHHHHHcCch
Q 047540 326 GRNEVEKLVRELMEGEK 342 (388)
Q Consensus 326 ~~~~l~~ai~~vl~~~~ 342 (388)
+.+++.++|.++|.++.
T Consensus 667 D~EafAeAI~~LLsd~~ 683 (794)
T PLN02501 667 TSEDFVAKVKEALANEP 683 (794)
T ss_pred CHHHHHHHHHHHHhCch
Confidence 68899999999998774
No 105
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=96.98 E-value=0.32 Score=48.40 Aligned_cols=81 Identities=12% Similarity=0.083 Sum_probs=55.7
Q ss_pred hcCcccccccChHh---hhcCCCcceeeecc---Cc-hhHHHHHhhCCcEEecCCccchhHhHHHHhh---hhceeEEee
Q 047540 248 KETGFIARWCPQEE---VLNHPAVGGFFTHS---GW-NSTIESLCAGVPMICWPFLGDQATNCRYTCN---EWGVGMDIT 317 (388)
Q Consensus 248 ~~~~~v~~~~pq~~---~L~~~~~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~---~~G~G~~l~ 317 (388)
.+++.+.+++|+.+ +|..+++ +|+.. |. .++.||+++|+|+|+.-..+. ..-+++ .-..|...
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp----~~~iv~~~~~g~~G~l~- 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFGIGVVEYMAAGLIPLAHASGGP----LLDIVVPWDGGPTGFLA- 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcccHHHHHHHcCCcEEEEcCCCC----chheeeccCCCCceEEe-
Confidence 45777888888754 7888887 55321 22 378999999999998654321 111222 33577776
Q ss_pred ecCCCCCCCHHHHHHHHHHHHcCch
Q 047540 318 NSGDDNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 318 ~~~~~~~~~~~~l~~ai~~vl~~~~ 342 (388)
+ +.+++.++|.++++++.
T Consensus 377 ----~---d~~~la~ai~~ll~~~~ 394 (419)
T cd03806 377 ----S---TAEEYAEAIEKILSLSE 394 (419)
T ss_pred ----C---CHHHHHHHHHHHHhCCH
Confidence 3 78999999999998754
No 106
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.96 E-value=0.0053 Score=59.10 Aligned_cols=110 Identities=18% Similarity=0.325 Sum_probs=75.2
Q ss_pred hcCcccccccChHhh---hcCCCcceeeecc-------Cc------hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhc
Q 047540 248 KETGFIARWCPQEEV---LNHPAVGGFFTHS-------GW------NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWG 311 (388)
Q Consensus 248 ~~~~~v~~~~pq~~~---L~~~~~~~~Ithg-------G~------~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G 311 (388)
.+|+.+.+|+|+.++ |+. +.+++...- .+ +-+.+.+++|+|+|+.+ +...+..| ++.+
T Consensus 206 ~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V-~~~~ 279 (333)
T PRK09814 206 SANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFI-VENG 279 (333)
T ss_pred CCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHH-HhCC
Confidence 458888999998764 444 444433221 11 22778899999999965 34556666 7789
Q ss_pred eeEEeeecCCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHH
Q 047540 312 VGMDITNSGDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQ 376 (388)
Q Consensus 312 ~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~ 376 (388)
+|+.+ + +.+++.+++.++. +++-+.|++|+++++++++. |.--.+++.+++.
T Consensus 280 ~G~~v-----~---~~~el~~~l~~~~-~~~~~~m~~n~~~~~~~~~~----g~~~~~~~~~~~~ 331 (333)
T PRK09814 280 LGFVV-----D---SLEELPEIIDNIT-EEEYQEMVENVKKISKLLRN----GYFTKKALVDAIK 331 (333)
T ss_pred ceEEe-----C---CHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHh
Confidence 99999 5 5678999998853 34345699999999999994 3433445555443
No 107
>PLN02949 transferase, transferring glycosyl groups
Probab=96.90 E-value=0.15 Score=51.33 Aligned_cols=92 Identities=13% Similarity=0.130 Sum_probs=56.7
Q ss_pred hcCcccccccChHh---hhcCCCcceeee---ccCch-hHHHHHhhCCcEEecCCccchhHhHHHHhhh-hc-eeEEeee
Q 047540 248 KETGFIARWCPQEE---VLNHPAVGGFFT---HSGWN-STIESLCAGVPMICWPFLGDQATNCRYTCNE-WG-VGMDITN 318 (388)
Q Consensus 248 ~~~~~v~~~~pq~~---~L~~~~~~~~It---hgG~~-s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~-~G-~G~~l~~ 318 (388)
.+++.+.+++|+.+ +|+.+++ +|. +=|.| ++.||+++|+|+|+....+--. ..+.++ .| .|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~---eIV~~~~~g~tG~l~-- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKM---DIVLDEDGQQTGFLA-- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcc---eeeecCCCCcccccC--
Confidence 45677788887654 7788877 653 22333 6999999999999976543100 001010 02 34444
Q ss_pred cCCCCCCCHHHHHHHHHHHHcCc-h-HHHHHHHHHH
Q 047540 319 SGDDNQVGRNEVEKLVRELMEGE-K-GMQMRNKASE 352 (388)
Q Consensus 319 ~~~~~~~~~~~l~~ai~~vl~~~-~-~~~~~~~a~~ 352 (388)
+ +.++++++|.+++++. + .+++.+++++
T Consensus 407 ---~---~~~~la~ai~~ll~~~~~~r~~m~~~ar~ 436 (463)
T PLN02949 407 ---T---TVEEYADAILEVLRMRETERLEIAAAARK 436 (463)
T ss_pred ---C---CHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 2 7899999999999853 3 1234444443
No 108
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.88 E-value=0.15 Score=49.28 Aligned_cols=141 Identities=15% Similarity=0.172 Sum_probs=87.9
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHH----hcC-CCCEEEEEcCCCCCCCCCCCchhHH-Hhhh--cCccc---ccccCh
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGL----VNS-NHPFLWIIRPDLVTGETADMPSEFE-VKAK--ETGFI---ARWCPQ 259 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al----~~~-~~~~iw~~~~~~~~~~~~~~~~~~~-~~~~--~~~~v---~~~~pq 259 (388)
+..+.+++=-..+.. +.++.+++++ +.. ...|+..+..+. .-.++. .++. +++.+ .+|.+.
T Consensus 204 ~~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~~~~~viyp~H~~~-------~v~e~~~~~L~~~~~v~li~pl~~~~f 275 (383)
T COG0381 204 KKYILVTAHRRENVG-EPLEEICEALREIAEEYPDVIVIYPVHPRP-------RVRELVLKRLKNVERVKLIDPLGYLDF 275 (383)
T ss_pred CcEEEEEcchhhccc-ccHHHHHHHHHHHHHhCCCceEEEeCCCCh-------hhhHHHHHHhCCCCcEEEeCCcchHHH
Confidence 468888643322222 3355555544 333 345555544321 011121 2333 34555 567777
Q ss_pred HhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHc
Q 047540 260 EEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELME 339 (388)
Q Consensus 260 ~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~ 339 (388)
..++.++-+ ++|-+|. -.-||...|+|.+++=..-+++. ++ + .|.-+.+ ..+.+.|.+++.++++
T Consensus 276 ~~L~~~a~~--iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE---~v-~-agt~~lv-------g~~~~~i~~~~~~ll~ 340 (383)
T COG0381 276 HNLMKNAFL--ILTDSGG-IQEEAPSLGKPVLVLRDTTERPE---GV-E-AGTNILV-------GTDEENILDAATELLE 340 (383)
T ss_pred HHHHHhceE--EEecCCc-hhhhHHhcCCcEEeeccCCCCcc---ce-e-cCceEEe-------CccHHHHHHHHHHHhh
Confidence 789999977 9998764 35689999999999999889987 33 3 4665555 3667899999999999
Q ss_pred CchHHHHHHHHHHHHHHH
Q 047540 340 GEKGMQMRNKASEWKRFA 357 (388)
Q Consensus 340 ~~~~~~~~~~a~~l~~~~ 357 (388)
+++ ..++......-.
T Consensus 341 ~~~---~~~~m~~~~npY 355 (383)
T COG0381 341 DEE---FYERMSNAKNPY 355 (383)
T ss_pred ChH---HHHHHhcccCCC
Confidence 887 554444444333
No 109
>PLN02275 transferase, transferring glycosyl groups
Probab=96.87 E-value=0.18 Score=49.25 Aligned_cols=74 Identities=12% Similarity=0.212 Sum_probs=51.2
Q ss_pred Ccccc-cccChHh---hhcCCCcceeee----c--cCc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeee
Q 047540 250 TGFIA-RWCPQEE---VLNHPAVGGFFT----H--SGW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITN 318 (388)
Q Consensus 250 ~~~v~-~~~pq~~---~L~~~~~~~~It----h--gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~ 318 (388)
|+.+. .|+|+.+ +|+.+++ ||. . -|. ++++||+++|+|+|+.... .+...+ +.-+.|..+
T Consensus 287 ~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g~~eiv-~~g~~G~lv-- 357 (371)
T PLN02275 287 HVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIGELV-KDGKNGLLF-- 357 (371)
T ss_pred ceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecCC----ChHHHc-cCCCCeEEE--
Confidence 44443 4788755 5889998 663 1 123 4699999999999997532 244445 655689998
Q ss_pred cCCCCCCCHHHHHHHHHHHH
Q 047540 319 SGDDNQVGRNEVEKLVRELM 338 (388)
Q Consensus 319 ~~~~~~~~~~~l~~ai~~vl 338 (388)
+ +.+++.++|.+++
T Consensus 358 ---~---~~~~la~~i~~l~ 371 (371)
T PLN02275 358 ---S---SSSELADQLLELL 371 (371)
T ss_pred ---C---CHHHHHHHHHHhC
Confidence 4 4788999888764
No 110
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=96.80 E-value=0.65 Score=46.26 Aligned_cols=179 Identities=11% Similarity=0.166 Sum_probs=99.3
Q ss_pred HHHHhcCCCCCCCcEEEeeCCCccC------CH----HHHHHHHHHHhcCCCCEEEEEcCCCCC---CCCCCCchhHHHh
Q 047540 180 CLQWLDSKELPNSVVYVNFGSSVYL------TK----QQLTEVAMGLVNSNHPFLWIIRPDLVT---GETADMPSEFEVK 246 (388)
Q Consensus 180 l~~~l~~~~~~~~~v~vs~Gs~~~~------~~----~~~~~~~~al~~~~~~~iw~~~~~~~~---~~~~~~~~~~~~~ 246 (388)
+..|+.... .+++|-|+.-..... .. +.+.++++.+.+.++++++........ ..+......+.+.
T Consensus 224 ~~~~~~~~~-~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~ 302 (426)
T PRK10017 224 VQHWLDVAA-QQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQH 302 (426)
T ss_pred hhhhhcccc-cCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHh
Confidence 345665444 457787776543211 21 234445555656688888665321100 0000011122233
Q ss_pred hhc--Cccc-c-cccChH--hhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEE-eeec
Q 047540 247 AKE--TGFI-A-RWCPQE--EVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMD-ITNS 319 (388)
Q Consensus 247 ~~~--~~~v-~-~~~pq~--~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~-l~~~ 319 (388)
++. +..+ . .+-+.+ .+++++++ +|+. =.-++.=|+..|||.+++++ |+-. ...+ +.+|.... +
T Consensus 303 ~~~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~-RlHa~I~a~~~gvP~i~i~Y--~~K~-~~~~-~~lg~~~~~~--- 372 (426)
T PRK10017 303 VSDPARYHVVMDELNDLEMGKILGACEL--TVGT-RLHSAIISMNFGTPAIAINY--EHKS-AGIM-QQLGLPEMAI--- 372 (426)
T ss_pred cccccceeEecCCCChHHHHHHHhhCCE--EEEe-cchHHHHHHHcCCCEEEeee--hHHH-HHHH-HHcCCccEEe---
Confidence 322 2232 2 233333 58888887 7763 34578889999999999998 3333 2233 56777655 4
Q ss_pred CCC-CCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q 047540 320 GDD-NQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPVI 379 (388)
Q Consensus 320 ~~~-~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~ 379 (388)
+ ..++.+++.+.+.+++++.+ .+++..++--+..+. .+.+...++++.+.
T Consensus 373 --~~~~l~~~~Li~~v~~~~~~r~--~~~~~l~~~v~~~r~------~~~~~~~~~~~~~~ 423 (426)
T PRK10017 373 --DIRHLLDGSLQAMVADTLGQLP--ALNARLAEAVSRERQ------TGMQMVQSVLERIG 423 (426)
T ss_pred --chhhCCHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHH------HHHHHHHHHHHHhc
Confidence 4 67889999999999998865 355554444444441 23344555555443
No 111
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.65 E-value=0.021 Score=57.30 Aligned_cols=119 Identities=15% Similarity=0.179 Sum_probs=85.3
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHH---Hhh---hcCcccccccChHh--
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFE---VKA---KETGFIARWCPQEE-- 261 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~---~~~---~~~~~v~~~~pq~~-- 261 (388)
++.+||+||+......++.+..-++-|+..+.-++|..+++.... ....++ ++. +++.++.+-.|...
T Consensus 428 ~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~----~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~ 503 (620)
T COG3914 428 EDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAE----INARLRDLAEREGVDSERLRFLPPAPNEDHR 503 (620)
T ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHH----HHHHHHHHHHHcCCChhheeecCCCCCHHHH
Confidence 578999999999999999999999999999999999998753221 111111 111 34445555445433
Q ss_pred -hhcCCCcceeee---ccCchhHHHHHhhCCcEEecCCccchhH--hHHHHhhhhceeEEe
Q 047540 262 -VLNHPAVGGFFT---HSGWNSTIESLCAGVPMICWPFLGDQAT--NCRYTCNEWGVGMDI 316 (388)
Q Consensus 262 -~L~~~~~~~~It---hgG~~s~~eal~~GvP~i~~P~~~DQ~~--na~~v~~~~G~G~~l 316 (388)
-+.-+++ |+. .||..|..|+|..|||+|.++ ++|+- |+.-++...|+-..|
T Consensus 504 a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~v 560 (620)
T COG3914 504 ARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELV 560 (620)
T ss_pred Hhhchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhh
Confidence 4455666 764 689999999999999999887 78876 666665666665555
No 112
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.58 E-value=0.027 Score=53.96 Aligned_cols=126 Identities=17% Similarity=0.219 Sum_probs=70.8
Q ss_pred EEEeeCCCccCCHHHHHHHHHHHhcCC--CCEEEEEcCCCCCCCCCCCchhHH--HhhhcCcccccccChHh---hhcCC
Q 047540 194 VYVNFGSSVYLTKQQLTEVAMGLVNSN--HPFLWIIRPDLVTGETADMPSEFE--VKAKETGFIARWCPQEE---VLNHP 266 (388)
Q Consensus 194 v~vs~Gs~~~~~~~~~~~~~~al~~~~--~~~iw~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~pq~~---~L~~~ 266 (388)
.++..|+... .+.+..+++++.... .+++ .+|...... .+...+. ....+++.+.+++++.+ ++..+
T Consensus 195 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~l~-ivG~~~~~~---~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~a 268 (363)
T cd04955 195 YYLLVGRIVP--ENNIDDLIEAFSKSNSGKKLV-IVGNADHNT---PYGKLLKEKAAADPRIIFVGPIYDQELLELLRYA 268 (363)
T ss_pred EEEEEecccc--cCCHHHHHHHHHhhccCceEE-EEcCCCCcc---hHHHHHHHHhCCCCcEEEccccChHHHHHHHHhC
Confidence 3455677642 234555666665544 4544 444321110 0111111 12246788899998864 56667
Q ss_pred Ccceeeecc----Cc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCc
Q 047540 267 AVGGFFTHS----GW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGE 341 (388)
Q Consensus 267 ~~~~~Ithg----G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~ 341 (388)
++ ++.+. |. +++.||+++|+|+|+....+ +...+ +. .|..+ +. .+.+.++|.++++++
T Consensus 269 d~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~-~~--~g~~~-----~~---~~~l~~~i~~l~~~~ 331 (363)
T cd04955 269 AL--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVL-GD--KAIYF-----KV---GDDLASLLEELEADP 331 (363)
T ss_pred CE--EEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceee-cC--CeeEe-----cC---chHHHHHHHHHHhCH
Confidence 76 55443 23 47899999999999875432 22222 32 45555 21 112999999999886
Q ss_pred h
Q 047540 342 K 342 (388)
Q Consensus 342 ~ 342 (388)
+
T Consensus 332 ~ 332 (363)
T cd04955 332 E 332 (363)
T ss_pred H
Confidence 4
No 113
>PLN02846 digalactosyldiacylglycerol synthase
Probab=96.55 E-value=1 Score=45.30 Aligned_cols=73 Identities=14% Similarity=0.171 Sum_probs=51.0
Q ss_pred cccccChHhhhcCCCcceeeeccC----chhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHH
Q 047540 253 IARWCPQEEVLNHPAVGGFFTHSG----WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRN 328 (388)
Q Consensus 253 v~~~~pq~~~L~~~~~~~~IthgG----~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~ 328 (388)
+.++.+..+++...++ ||.-+- -++++||+++|+|+|+.-..+ | ..+ ..-+.|... -+.+
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v-~~~~ng~~~--------~~~~ 351 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFF-KQFPNCRTY--------DDGK 351 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-cee-ecCCceEec--------CCHH
Confidence 3455555668888887 887653 257899999999999976443 2 223 444555555 2577
Q ss_pred HHHHHHHHHHcCc
Q 047540 329 EVEKLVRELMEGE 341 (388)
Q Consensus 329 ~l~~ai~~vl~~~ 341 (388)
++.+++.++|.++
T Consensus 352 ~~a~ai~~~l~~~ 364 (462)
T PLN02846 352 GFVRATLKALAEE 364 (462)
T ss_pred HHHHHHHHHHccC
Confidence 9999999999854
No 114
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=96.53 E-value=0.1 Score=51.29 Aligned_cols=79 Identities=13% Similarity=0.132 Sum_probs=54.5
Q ss_pred hcCcccccccChHh---hhcCCCcceeeecc---Cc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecC
Q 047540 248 KETGFIARWCPQEE---VLNHPAVGGFFTHS---GW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSG 320 (388)
Q Consensus 248 ~~~~~v~~~~pq~~---~L~~~~~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 320 (388)
.+++.+.+|+|+.+ +|+.+++ +|.-. |. .+++||+++|+|+|+-+..+ ....+ +. |.+...
T Consensus 249 ~~~v~~~G~~~~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i-~~-~~~~~~---- 316 (398)
T cd03796 249 QDRVELLGAVPHERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVL-PP-DMILLA---- 316 (398)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhhe-eC-Cceeec----
Confidence 35577789988654 7788888 55422 44 38999999999999977643 22333 33 444333
Q ss_pred CCCCCCHHHHHHHHHHHHcCc
Q 047540 321 DDNQVGRNEVEKLVRELMEGE 341 (388)
Q Consensus 321 ~~~~~~~~~l~~ai~~vl~~~ 341 (388)
. .+.+++.+++.+++++.
T Consensus 317 -~--~~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 317 -E--PDVESIVRKLEEAISIL 334 (398)
T ss_pred -C--CCHHHHHHHHHHHHhCh
Confidence 2 27899999999999864
No 115
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=96.44 E-value=0.085 Score=51.53 Aligned_cols=126 Identities=18% Similarity=0.099 Sum_probs=71.3
Q ss_pred CcEEEeeCCCcc-CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHh---hhcCCC
Q 047540 192 SVVYVNFGSSVY-LTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEE---VLNHPA 267 (388)
Q Consensus 192 ~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~---~L~~~~ 267 (388)
..+++.+|++.. ...+.+..+++. ..+..++++ |....... . ..+ ...+|+.+.+++|+.+ .+++++
T Consensus 205 ~~~i~y~G~l~~~~d~~ll~~la~~--~p~~~~vli-G~~~~~~~---~-~~~--~~~~nV~~~G~~~~~~l~~~l~~~D 275 (373)
T cd04950 205 RPVIGYYGAIAEWLDLELLEALAKA--RPDWSFVLI-GPVDVSID---P-SAL--LRLPNVHYLGPKPYKELPAYLAGFD 275 (373)
T ss_pred CCEEEEEeccccccCHHHHHHHHHH--CCCCEEEEE-CCCcCccC---h-hHh--ccCCCEEEeCCCCHHHHHHHHHhCC
Confidence 456666788764 233344434332 234555544 43211000 0 111 1136888899998655 678888
Q ss_pred cceee------eccCc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 268 VGGFF------THSGW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 268 ~~~~I------thgG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
+.++- +.++. +.+.|++++|+|+|+.++ ...+ +..+.+..+ . -+.+++.++|.+++.+
T Consensus 276 v~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~-~~~~~~~~~-----~--~d~~~~~~ai~~~l~~ 340 (373)
T cd04950 276 VAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVR-RYEDEVVLI-----A--DDPEEFVAAIEKALLE 340 (373)
T ss_pred EEecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHH-hhcCcEEEe-----C--CCHHHHHHHHHHHHhc
Confidence 84332 22333 358999999999998763 1222 332333333 2 2789999999998765
Q ss_pred c
Q 047540 341 E 341 (388)
Q Consensus 341 ~ 341 (388)
+
T Consensus 341 ~ 341 (373)
T cd04950 341 D 341 (373)
T ss_pred C
Confidence 4
No 116
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=96.36 E-value=0.029 Score=56.74 Aligned_cols=120 Identities=22% Similarity=0.279 Sum_probs=79.1
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHh------hhcCcccccccChHh--
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVK------AKETGFIARWCPQEE-- 261 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~~~pq~~-- 261 (388)
++.+||.+|-.....+++.+...++-|++.+..++|..+.+.+-+ ..|..- .++++.+.+-+...+
T Consensus 757 ~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge------~rf~ty~~~~Gl~p~riifs~va~k~eHv 830 (966)
T KOG4626|consen 757 EDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE------QRFRTYAEQLGLEPDRIIFSPVAAKEEHV 830 (966)
T ss_pred CCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch------HHHHHHHHHhCCCccceeeccccchHHHH
Confidence 468999999999999999999999999999999999998654321 112111 134444433332222
Q ss_pred ---hhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEe
Q 047540 262 ---VLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDI 316 (388)
Q Consensus 262 ---~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l 316 (388)
.|..-.+.-+++. |..|.++.|+.|||||.+|.-.--...|......+|+|..+
T Consensus 831 rr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hli 887 (966)
T KOG4626|consen 831 RRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLI 887 (966)
T ss_pred HhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHH
Confidence 2221111124554 78899999999999999997443333333323568999988
No 117
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=96.31 E-value=0.072 Score=50.94 Aligned_cols=130 Identities=15% Similarity=0.086 Sum_probs=76.7
Q ss_pred CCcEEEeeCCCcc-CCHHHHHHHHHHHhcC--CCCEEEEEcCCCCCCCCCCCchhHHHh-----hhcCcccccccChH-h
Q 047540 191 NSVVYVNFGSSVY-LTKQQLTEVAMGLVNS--NHPFLWIIRPDLVTGETADMPSEFEVK-----AKETGFIARWCPQE-E 261 (388)
Q Consensus 191 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~pq~-~ 261 (388)
+..+++..|.... ...+.+...+..+.+. +.+++++ |... ....+.+. ..+++.+.++..+. .
T Consensus 191 ~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~iv-G~g~-------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 262 (358)
T cd03812 191 DKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLV-GDGE-------LEEEIKKKVKELGLEDKVIFLGVRNDVPE 262 (358)
T ss_pred CCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEE-eCCc-------hHHHHHHHHHhcCCCCcEEEecccCCHHH
Confidence 4566777777643 2234444444444433 3344443 3221 11111111 23566777775553 4
Q ss_pred hhcCCCcceeeec----cCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHH
Q 047540 262 VLNHPAVGGFFTH----SGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVREL 337 (388)
Q Consensus 262 ~L~~~~~~~~Ith----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~v 337 (388)
++..+++ +|.- |--++++||+++|+|+|+-...+ ....+ +. +.|... . .-+.+++.++|.++
T Consensus 263 ~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i-~~-~~~~~~-----~-~~~~~~~a~~i~~l 328 (358)
T cd03812 263 LLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDL-TD-LVKFLS-----L-DESPEIWAEEILKL 328 (358)
T ss_pred HHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhh-cc-CccEEe-----C-CCCHHHHHHHHHHH
Confidence 8888888 5543 22468999999999999865543 23334 44 566665 2 23579999999999
Q ss_pred HcCch
Q 047540 338 MEGEK 342 (388)
Q Consensus 338 l~~~~ 342 (388)
+++++
T Consensus 329 ~~~~~ 333 (358)
T cd03812 329 KSEDR 333 (358)
T ss_pred HhCcc
Confidence 99986
No 118
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.25 E-value=0.11 Score=50.42 Aligned_cols=79 Identities=18% Similarity=0.189 Sum_probs=52.8
Q ss_pred cCccccccc--ChH---hhhcCCCcceeeecc---Cc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeec
Q 047540 249 ETGFIARWC--PQE---EVLNHPAVGGFFTHS---GW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNS 319 (388)
Q Consensus 249 ~~~~v~~~~--pq~---~~L~~~~~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 319 (388)
+++.+.++. ++. .+++.+++ |+..+ |. .++.||+++|+|+|+....+ ....+ ..-..|..+
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i-~~~~~g~~~--- 321 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQI-EDGETGFLV--- 321 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhc-ccCCceEEe---
Confidence 455566665 432 47788888 77544 33 48999999999999876432 22334 444567766
Q ss_pred CCCCCCCHHHHHHHHHHHHcCch
Q 047540 320 GDDNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 320 ~~~~~~~~~~l~~ai~~vl~~~~ 342 (388)
+ +.+++..+|.+++++++
T Consensus 322 --~---~~~~~a~~i~~ll~~~~ 339 (372)
T cd03792 322 --D---TVEEAAVRILYLLRDPE 339 (372)
T ss_pred --C---CcHHHHHHHHHHHcCHH
Confidence 3 34677789999998865
No 119
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=96.03 E-value=0.11 Score=49.17 Aligned_cols=130 Identities=12% Similarity=-0.012 Sum_probs=79.1
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHh--hhcCcccccccChHh---hhcCC
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVK--AKETGFIARWCPQEE---VLNHP 266 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~pq~~---~L~~~ 266 (388)
..+.+..|... ..+....+++++++.+.++++.-.+... . .+....... ..+++.+.+++++.+ +++.+
T Consensus 171 ~~~i~~~Gr~~--~~Kg~~~li~~~~~~~~~l~i~G~~~~~-~---~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~ 244 (335)
T cd03802 171 GDYLLFLGRIS--PEKGPHLAIRAARRAGIPLKLAGPVSDP-D---YFYREIAPELLDGPDIEYLGEVGGAEKAELLGNA 244 (335)
T ss_pred CCEEEEEEeec--cccCHHHHHHHHHhcCCeEEEEeCCCCH-H---HHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 34455566653 2344556777777777776655443210 0 000111111 246788899998754 67888
Q ss_pred Ccceeeec--cCc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 267 AVGGFFTH--SGW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 267 ~~~~~Ith--gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
++-++-++ -|. .++.||+++|+|+|+.... .+...+ +.-..|..+ +. .+++.++|.+++..
T Consensus 245 d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i-~~~~~g~l~-----~~---~~~l~~~l~~l~~~ 308 (335)
T cd03802 245 RALLFPILWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVV-EDGVTGFLV-----DS---VEELAAAVARADRL 308 (335)
T ss_pred cEEEeCCcccCCcchHHHHHHhcCCCEEEeCCC----Cchhhe-eCCCcEEEe-----CC---HHHHHHHHHHHhcc
Confidence 88333332 344 4799999999999987653 223344 443378888 43 88999999988654
No 120
>PHA01633 putative glycosyl transferase group 1
Probab=95.90 E-value=0.12 Score=49.70 Aligned_cols=86 Identities=15% Similarity=0.166 Sum_probs=56.5
Q ss_pred hcCcccc---cccChH---hhhcCCCcceeeecc---Cc-hhHHHHHhhCCcEEecCC------ccch------hHhHHH
Q 047540 248 KETGFIA---RWCPQE---EVLNHPAVGGFFTHS---GW-NSTIESLCAGVPMICWPF------LGDQ------ATNCRY 305 (388)
Q Consensus 248 ~~~~~v~---~~~pq~---~~L~~~~~~~~Ithg---G~-~s~~eal~~GvP~i~~P~------~~DQ------~~na~~ 305 (388)
++++.+. +++++. .+++.+++ ||.-+ |+ .+++||+++|+|+|+--. .+|+ ..+...
T Consensus 200 ~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~ 277 (335)
T PHA01633 200 PANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEE 277 (335)
T ss_pred CCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHH
Confidence 4566665 455554 47888888 77543 44 468999999999998633 2332 233333
Q ss_pred Hhh-hhceeEEeeecCCCCCCCHHHHHHHHHHHHcCc
Q 047540 306 TCN-EWGVGMDITNSGDDNQVGRNEVEKLVRELMEGE 341 (388)
Q Consensus 306 v~~-~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~ 341 (388)
.++ ..|.|..+ ...+.+++.++|.+++...
T Consensus 278 ~~~~~~g~g~~~------~~~d~~~la~ai~~~~~~~ 308 (335)
T PHA01633 278 YYDKEHGQKWKI------HKFQIEDMANAIILAFELQ 308 (335)
T ss_pred hcCcccCceeee------cCCCHHHHHHHHHHHHhcc
Confidence 222 34677777 3579999999999985443
No 121
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=95.29 E-value=0.25 Score=49.90 Aligned_cols=130 Identities=7% Similarity=-0.001 Sum_probs=72.3
Q ss_pred CCcEEEeeCCCcc-CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchh---HHHhhhcCcccccccChH---hhh
Q 047540 191 NSVVYVNFGSSVY-LTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSE---FEVKAKETGFIARWCPQE---EVL 263 (388)
Q Consensus 191 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~pq~---~~L 263 (388)
+..+++..|.... ...+.+.+.+..+.+.+.++++.-.++. . ..+. +..+.+.++.+....++. .++
T Consensus 290 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~--~----~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~ 363 (473)
T TIGR02095 290 DVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDP--E----LEEALRELAERYPGNVRVIIGYDEALAHLIY 363 (473)
T ss_pred CCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCH--H----HHHHHHHHHHHCCCcEEEEEcCCHHHHHHHH
Confidence 3456666777653 2233333333444444556655433210 0 1111 222234455554444443 377
Q ss_pred cCCCcceeeecc---Cch-hHHHHHhhCCcEEecCCccchhHhHHHHhhhh------ceeEEeeecCCCCCCCHHHHHHH
Q 047540 264 NHPAVGGFFTHS---GWN-STIESLCAGVPMICWPFLGDQATNCRYTCNEW------GVGMDITNSGDDNQVGRNEVEKL 333 (388)
Q Consensus 264 ~~~~~~~~Ithg---G~~-s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~------G~G~~l~~~~~~~~~~~~~l~~a 333 (388)
+.+++ +|.-. |.| +++||+++|+|+|+-...+ ....+ ... +.|..+ + .-+.+++.++
T Consensus 364 ~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v-~~~~~~~~~~~G~l~-----~-~~d~~~la~~ 430 (473)
T TIGR02095 364 AGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTV-VDGDPEAESGTGFLF-----E-EYDPGALLAA 430 (473)
T ss_pred HhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceE-ecCCCCCCCCceEEe-----C-CCCHHHHHHH
Confidence 88888 66432 443 7899999999999866532 11112 222 788888 3 3578899999
Q ss_pred HHHHHc
Q 047540 334 VRELME 339 (388)
Q Consensus 334 i~~vl~ 339 (388)
|.+++.
T Consensus 431 i~~~l~ 436 (473)
T TIGR02095 431 LSRALR 436 (473)
T ss_pred HHHHHH
Confidence 999886
No 122
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=95.25 E-value=0.59 Score=47.84 Aligned_cols=62 Identities=24% Similarity=0.180 Sum_probs=44.2
Q ss_pred hcCcccccccChH-hhhcCCCcceeeec---cCc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEe
Q 047540 248 KETGFIARWCPQE-EVLNHPAVGGFFTH---SGW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDI 316 (388)
Q Consensus 248 ~~~~~v~~~~pq~-~~L~~~~~~~~Ith---gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l 316 (388)
.+++.+.+|.++. .+|..+++ ||.. -|+ ++++||+++|+|+|+.... .+...+ ..-..|..+
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV-~dG~nG~LV 520 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECF-IEGVSGFIL 520 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHc-ccCCcEEEE
Confidence 3667778886554 38888888 7753 354 5899999999999987653 344545 445678888
No 123
>PRK14098 glycogen synthase; Provisional
Probab=95.17 E-value=0.51 Score=47.97 Aligned_cols=133 Identities=8% Similarity=0.025 Sum_probs=73.3
Q ss_pred CcEEEeeCCCccC-CHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChH---hhhcCCC
Q 047540 192 SVVYVNFGSSVYL-TKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQE---EVLNHPA 267 (388)
Q Consensus 192 ~~v~vs~Gs~~~~-~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~---~~L~~~~ 267 (388)
..+++..|..... ..+.+.+.+..+.+.+..++.+ |..... ....+ ..+.++.++++.+..+++.. .+++.++
T Consensus 307 ~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lviv-G~G~~~-~~~~l-~~l~~~~~~~V~~~g~~~~~~~~~~~a~aD 383 (489)
T PRK14098 307 TPLVGVIINFDDFQGAELLAESLEKLVELDIQLVIC-GSGDKE-YEKRF-QDFAEEHPEQVSVQTEFTDAFFHLAIAGLD 383 (489)
T ss_pred CCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEE-eCCCHH-HHHHH-HHHHHHCCCCEEEEEecCHHHHHHHHHhCC
Confidence 4566666665432 2333333333443345555544 432100 00001 12223345677777777764 4788888
Q ss_pred cceeeecc---Cc-hhHHHHHhhCCcEEecCCcc--chhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHH
Q 047540 268 VGGFFTHS---GW-NSTIESLCAGVPMICWPFLG--DQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELM 338 (388)
Q Consensus 268 ~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl 338 (388)
+ |+..+ |. .+.+||+.+|+|.|+....+ |...+ .. +.-+.|..+ + .-+.+++.++|.+++
T Consensus 384 i--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~-~~~~~G~l~-----~-~~d~~~la~ai~~~l 449 (489)
T PRK14098 384 M--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VS-EDKGSGFIF-----H-DYTPEALVAKLGEAL 449 (489)
T ss_pred E--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CC-CCCCceeEe-----C-CCCHHHHHHHHHHHH
Confidence 8 66543 22 36789999999888866432 22111 11 223678888 3 357889999999876
No 124
>PRK00654 glgA glycogen synthase; Provisional
Probab=94.83 E-value=0.55 Score=47.38 Aligned_cols=132 Identities=11% Similarity=0.107 Sum_probs=71.3
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHh---cCCCCEEEEEcCCCCCCCCCCCchh---HHHhhhcCccc-ccccChH--h
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLV---NSNHPFLWIIRPDLVTGETADMPSE---FEVKAKETGFI-ARWCPQE--E 261 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~---~~~~~~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~~v-~~~~pq~--~ 261 (388)
+..+++..|.... .+.+..+++++. +.+.+++++-.++.. ..+. +.++.+.++.+ .+|-.+. .
T Consensus 281 ~~~~i~~vGRl~~--~KG~~~li~a~~~l~~~~~~lvivG~g~~~------~~~~l~~l~~~~~~~v~~~~g~~~~~~~~ 352 (466)
T PRK00654 281 DAPLFAMVSRLTE--QKGLDLVLEALPELLEQGGQLVLLGTGDPE------LEEAFRALAARYPGKVGVQIGYDEALAHR 352 (466)
T ss_pred CCcEEEEeecccc--ccChHHHHHHHHHHHhcCCEEEEEecCcHH------HHHHHHHHHHHCCCcEEEEEeCCHHHHHH
Confidence 3456666777642 233333444433 335666665332100 1111 22233444433 4553332 4
Q ss_pred hhcCCCcceeeec---cCc-hhHHHHHhhCCcEEecCCcc--chhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHH
Q 047540 262 VLNHPAVGGFFTH---SGW-NSTIESLCAGVPMICWPFLG--DQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVR 335 (388)
Q Consensus 262 ~L~~~~~~~~Ith---gG~-~s~~eal~~GvP~i~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~ 335 (388)
+++.+++ ||.- -|. .+.+||+.+|+|.|+....+ |.-.+...- ..-+.|..+ + .-+.+++.++|.
T Consensus 353 ~~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~-~~~~~G~lv-----~-~~d~~~la~~i~ 423 (466)
T PRK00654 353 IYAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPE-DGEATGFVF-----D-DFNAEDLLRALR 423 (466)
T ss_pred HHhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCC-CCCCceEEe-----C-CCCHHHHHHHHH
Confidence 7888888 6643 244 37899999999999865422 211111000 112778888 3 357889999999
Q ss_pred HHHc
Q 047540 336 ELME 339 (388)
Q Consensus 336 ~vl~ 339 (388)
++++
T Consensus 424 ~~l~ 427 (466)
T PRK00654 424 RALE 427 (466)
T ss_pred HHHH
Confidence 9876
No 125
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=94.53 E-value=0.31 Score=49.11 Aligned_cols=135 Identities=10% Similarity=0.056 Sum_probs=71.9
Q ss_pred CCcEEEeeCCCccC-CHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhH---HHhhhcCccc-ccccChH--hhh
Q 047540 191 NSVVYVNFGSSVYL-TKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEF---EVKAKETGFI-ARWCPQE--EVL 263 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~-~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~---~~~~~~~~~v-~~~~pq~--~~L 263 (388)
+..+++..|..... ..+.+.+.+..+.+.+.+++++-.+.. . +...+ ..+..+++.+ ..+.... .++
T Consensus 295 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~--~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 368 (476)
T cd03791 295 DAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDP--E----YEEALRELAARYPGRVAVLIGYDEALAHLIY 368 (476)
T ss_pred CCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCH--H----HHHHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Confidence 35566667776522 223333333444444556555433211 0 11111 1222345554 3443222 377
Q ss_pred cCCCcceeeecc---Cc-hhHHHHHhhCCcEEecCCcc--chhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHH
Q 047540 264 NHPAVGGFFTHS---GW-NSTIESLCAGVPMICWPFLG--DQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVREL 337 (388)
Q Consensus 264 ~~~~~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~v 337 (388)
+.+++ +|.-. |. .+.+||+++|+|+|+....+ |-..+...- .+-|.|..+ + .-+.+++.++|.++
T Consensus 369 ~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~-~~~~~G~~~-----~-~~~~~~l~~~i~~~ 439 (476)
T cd03791 369 AGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNED-TGEGTGFVF-----E-GYNADALLAALRRA 439 (476)
T ss_pred HhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCC-CCCCCeEEe-----C-CCCHHHHHHHHHHH
Confidence 88887 66431 22 36899999999999866532 221111111 123589998 3 35688999999998
Q ss_pred HcC
Q 047540 338 MEG 340 (388)
Q Consensus 338 l~~ 340 (388)
++.
T Consensus 440 l~~ 442 (476)
T cd03791 440 LAL 442 (476)
T ss_pred HHH
Confidence 853
No 126
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=94.44 E-value=0.34 Score=36.79 Aligned_cols=81 Identities=14% Similarity=0.128 Sum_probs=51.4
Q ss_pred cCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhc-eeEEeeecCCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHH
Q 047540 275 SGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWG-VGMDITNSGDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEW 353 (388)
Q Consensus 275 gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l 353 (388)
+-..-+.|++++|+|+|+-+. ......+ +. | -++.. + +.+++.++|..+++|+. .+++-+++.
T Consensus 10 ~~~~r~~E~~a~G~~vi~~~~----~~~~~~~-~~-~~~~~~~-----~---~~~el~~~i~~ll~~~~--~~~~ia~~a 73 (92)
T PF13524_consen 10 GPNMRIFEAMACGTPVISDDS----PGLREIF-ED-GEHIITY-----N---DPEELAEKIEYLLENPE--ERRRIAKNA 73 (92)
T ss_pred CCchHHHHHHHCCCeEEECCh----HHHHHHc-CC-CCeEEEE-----C---CHHHHHHHHHHHHCCHH--HHHHHHHHH
Confidence 334578999999999998765 2333333 32 4 44444 2 89999999999999885 244444444
Q ss_pred HHHHHHHhCCCCChHHHHHHHH
Q 047540 354 KRFAEEAAAPDGSSATNLEKLE 375 (388)
Q Consensus 354 ~~~~~~~~~~gg~s~~~~~~~v 375 (388)
.+.+++ ..+...-+++++
T Consensus 74 ~~~v~~----~~t~~~~~~~il 91 (92)
T PF13524_consen 74 RERVLK----RHTWEHRAEQIL 91 (92)
T ss_pred HHHHHH----hCCHHHHHHHHH
Confidence 444442 455555555544
No 127
>PHA01630 putative group 1 glycosyl transferase
Probab=94.33 E-value=0.85 Score=43.85 Aligned_cols=111 Identities=11% Similarity=0.051 Sum_probs=59.0
Q ss_pred ccChHh---hhcCCCcceeeec-cC-chhHHHHHhhCCcEEecCCcc--chhH---hHHHHhhh-----------hceeE
Q 047540 256 WCPQEE---VLNHPAVGGFFTH-SG-WNSTIESLCAGVPMICWPFLG--DQAT---NCRYTCNE-----------WGVGM 314 (388)
Q Consensus 256 ~~pq~~---~L~~~~~~~~Ith-gG-~~s~~eal~~GvP~i~~P~~~--DQ~~---na~~v~~~-----------~G~G~ 314 (388)
++|+.+ +++.+++-++-++ -| -.++.||+++|+|+|+.-..+ |... |.-.+ +. .++|.
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv-~~~~~~~~~~~~~~~~G~ 275 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWI-KSGRKPKLWYTNPIHVGY 275 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEe-eecccccccccCCccccc
Confidence 366543 6888888322233 33 357899999999999976533 2211 11111 10 13455
Q ss_pred EeeecCCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHH
Q 047540 315 DITNSGDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPV 378 (388)
Q Consensus 315 ~l~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l 378 (388)
.+ + .+.+++.+++.++|.+.+.+.++++...-+...++ ..+-....+++.+-+
T Consensus 276 ~v-----~--~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~----~fs~~~ia~k~~~l~ 328 (331)
T PHA01630 276 FL-----D--PDIEDAYQKLLEALANWTPEKKKENLEGRAILYRE----NYSYNAIAKMWEKIL 328 (331)
T ss_pred cc-----C--CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHH
Confidence 54 2 35677888888888774111244333333333222 355555555555544
No 128
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=92.03 E-value=3.1 Score=39.65 Aligned_cols=55 Identities=16% Similarity=0.198 Sum_probs=38.2
Q ss_pred ChHhhhcCCCcceeeeccCc-hhHHHHHhhCCcEEecCCccchhH----hHHHHhhhhceeEEe
Q 047540 258 PQEEVLNHPAVGGFFTHSGW-NSTIESLCAGVPMICWPFLGDQAT----NCRYTCNEWGVGMDI 316 (388)
Q Consensus 258 pq~~~L~~~~~~~~IthgG~-~s~~eal~~GvP~i~~P~~~DQ~~----na~~v~~~~G~G~~l 316 (388)
|....|+.++. ||.-+.. +-+.||+..|+|+.++|.-. +.. -...+ ++.|.-..+
T Consensus 221 Py~~~La~ad~--i~VT~DSvSMvsEA~~tG~pV~v~~l~~-~~~r~~r~~~~L-~~~g~~r~~ 280 (311)
T PF06258_consen 221 PYLGFLAAADA--IVVTEDSVSMVSEAAATGKPVYVLPLPG-RSGRFRRFHQSL-EERGAVRPF 280 (311)
T ss_pred cHHHHHHhCCE--EEEcCccHHHHHHHHHcCCCEEEecCCC-cchHHHHHHHHH-HHCCCEEEC
Confidence 56678988887 6555665 56799999999999999865 211 22334 345776666
No 129
>PLN02316 synthase/transferase
Probab=91.34 E-value=10 Score=41.91 Aligned_cols=117 Identities=7% Similarity=0.005 Sum_probs=67.7
Q ss_pred cCcccccccChH---hhhcCCCcceeeecc---Cc-hhHHHHHhhCCcEEecCCcc--chhHh-------HHHHhhhhce
Q 047540 249 ETGFIARWCPQE---EVLNHPAVGGFFTHS---GW-NSTIESLCAGVPMICWPFLG--DQATN-------CRYTCNEWGV 312 (388)
Q Consensus 249 ~~~~v~~~~pq~---~~L~~~~~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~--DQ~~n-------a~~v~~~~G~ 312 (388)
+++.+....+.. .++..+++ ||.-+ |. .+.+||+++|+|.|+-...+ |.... +... ..-+.
T Consensus 900 ~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~-g~~~t 976 (1036)
T PLN02316 900 DRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQ-GLEPN 976 (1036)
T ss_pred CeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhcccccccccccccc-ccCCc
Confidence 345444334443 47888888 77543 22 47899999999988765422 22211 1111 11257
Q ss_pred eEEeeecCCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q 047540 313 GMDITNSGDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPVI 379 (388)
Q Consensus 313 G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~ 379 (388)
|..+ ..-+++.|..+|.+++.+ |......+++..+.++...-|-.....+.++-+.
T Consensus 977 Gflf------~~~d~~aLa~AL~raL~~-----~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~ 1032 (1036)
T PLN02316 977 GFSF------DGADAAGVDYALNRAISA-----WYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYH 1032 (1036)
T ss_pred eEEe------CCCCHHHHHHHHHHHHhh-----hhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 8888 346788999999999875 3333344555555555555555444444444433
No 130
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=91.10 E-value=0.17 Score=39.27 Aligned_cols=51 Identities=18% Similarity=0.223 Sum_probs=42.2
Q ss_pred HHHHhcCCCCCCCcEEEeeCCCccC---CH--HHHHHHHHHHhcCCCCEEEEEcCCC
Q 047540 180 CLQWLDSKELPNSVVYVNFGSSVYL---TK--QQLTEVAMGLVNSNHPFLWIIRPDL 231 (388)
Q Consensus 180 l~~~l~~~~~~~~~v~vs~Gs~~~~---~~--~~~~~~~~al~~~~~~~iw~~~~~~ 231 (388)
+-.|+...+ .++.|.|++||.... .. ..+..+++++..++..+|..+....
T Consensus 30 ~P~Wl~~~~-~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~ 85 (97)
T PF06722_consen 30 VPDWLLEPP-GRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQ 85 (97)
T ss_dssp EEGGGSSST-SSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCC
T ss_pred CCcccccCC-CCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHH
Confidence 457999988 899999999997643 22 4688899999999999999988553
No 131
>PRK10125 putative glycosyl transferase; Provisional
Probab=90.91 E-value=3.7 Score=40.67 Aligned_cols=115 Identities=10% Similarity=0.022 Sum_probs=64.6
Q ss_pred cEEEeeCCCccCCHHHHHHHHHHHhcCCCCE-EEEEcCCCCCCCCCCCchhHHHhhhcCccccccc-Ch---HhhhcCCC
Q 047540 193 VVYVNFGSSVYLTKQQLTEVAMGLVNSNHPF-LWIIRPDLVTGETADMPSEFEVKAKETGFIARWC-PQ---EEVLNHPA 267 (388)
Q Consensus 193 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~-iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-pq---~~~L~~~~ 267 (388)
.+++..|.......+.+..+++++...+..+ ++.+|..... . ..++...++. ++ ..+++.++
T Consensus 242 ~~il~v~~~~~~~~Kg~~~li~A~~~l~~~~~L~ivG~g~~~-----~--------~~~v~~~g~~~~~~~l~~~y~~aD 308 (405)
T PRK10125 242 PKIAVVAHDLRYDGKTDQQLVREMMALGDKIELHTFGKFSPF-----T--------AGNVVNHGFETDKRKLMSALNQMD 308 (405)
T ss_pred CEEEEEEeccccCCccHHHHHHHHHhCCCCeEEEEEcCCCcc-----c--------ccceEEecCcCCHHHHHHHHHhCC
Confidence 3444445422222344567888887765433 4455532100 0 1233334443 22 33667777
Q ss_pred cceeeeccC---c-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHH
Q 047540 268 VGGFFTHSG---W-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLV 334 (388)
Q Consensus 268 ~~~~IthgG---~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai 334 (388)
+ ||.-+= + ++++||+++|+|+|+....+ ....+ .. +.|..+ +. -+.+++++++
T Consensus 309 v--fV~pS~~Egfp~vilEAmA~G~PVVat~~gG----~~Eiv-~~-~~G~lv-----~~-~d~~~La~~~ 365 (405)
T PRK10125 309 A--LVFSSRVDNYPLILCEALSIGVPVIATHSDA----AREVL-QK-SGGKTV-----SE-EEVLQLAQLS 365 (405)
T ss_pred E--EEECCccccCcCHHHHHHHcCCCEEEeCCCC----hHHhE-eC-CcEEEE-----CC-CCHHHHHhcc
Confidence 7 765442 2 57899999999999987754 22223 43 579988 42 3667777654
No 132
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=90.19 E-value=3.7 Score=41.37 Aligned_cols=102 Identities=12% Similarity=0.082 Sum_probs=67.5
Q ss_pred ccChHh---hhcCCCcceeee---ccCch-hHHHHHhhCCc----EEecCCccchhHhHHHHhhhhceeEEeeecCCCCC
Q 047540 256 WCPQEE---VLNHPAVGGFFT---HSGWN-STIESLCAGVP----MICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQ 324 (388)
Q Consensus 256 ~~pq~~---~L~~~~~~~~It---hgG~~-s~~eal~~GvP----~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 324 (388)
.+++.+ +++.+++ |+. +=|+| ++.|++++|+| +|+--+.+- +..+ +.|+.+ + .
T Consensus 343 ~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~----~~~l----~~gllV-----n-P 406 (456)
T TIGR02400 343 SYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA----AQEL----NGALLV-----N-P 406 (456)
T ss_pred CCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCC----hHHh----CCcEEE-----C-C
Confidence 445554 6778888 665 33664 67899999999 666555432 1222 357787 4 3
Q ss_pred CCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q 047540 325 VGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPVI 379 (388)
Q Consensus 325 ~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~ 379 (388)
-+.++++++|.++|+.+. ++.+++.+++.+.+. ..+...-.+++++.|.
T Consensus 407 ~d~~~lA~aI~~aL~~~~-~er~~r~~~~~~~v~-----~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 407 YDIDGMADAIARALTMPL-EEREERHRAMMDKLR-----KNDVQRWREDFLSDLN 455 (456)
T ss_pred CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHhh
Confidence 578899999999998652 135666666666665 2566666777776653
No 133
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=90.08 E-value=17 Score=34.34 Aligned_cols=103 Identities=15% Similarity=0.091 Sum_probs=61.0
Q ss_pred cchHHHHHhcCCCCCCCcEEEeeCCCc------cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhc
Q 047540 176 EETECLQWLDSKELPNSVVYVNFGSSV------YLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKE 249 (388)
Q Consensus 176 ~~~~l~~~l~~~~~~~~~v~vs~Gs~~------~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~ 249 (388)
+++++.+-|.-.+ +.+.|..-+=+.. .........+++.|++.+ +..+..... .....++. +
T Consensus 168 pd~evlkeLgl~~-~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g---iV~ipr~~~-------~~eife~~-~ 235 (346)
T COG1817 168 PDPEVLKELGLEE-GETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG---IVLIPREKE-------QAEIFEGY-R 235 (346)
T ss_pred CCHHHHHHcCCCC-CCceEEEeeccccceeeccccchhhHHHHHHHHHhCc---EEEecCchh-------HHHHHhhh-c
Confidence 4556666666666 5678877765532 122344777888888888 333332211 11111111 2
Q ss_pred Cccc-ccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEec
Q 047540 250 TGFI-ARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICW 293 (388)
Q Consensus 250 ~~~v-~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~ 293 (388)
|..+ .+=++..++|-.++. +|+-|| .---||+..|+|.|.+
T Consensus 236 n~i~pk~~vD~l~Llyya~l--vig~gg-TMarEaAlLGtpaIs~ 277 (346)
T COG1817 236 NIIIPKKAVDTLSLLYYATL--VIGAGG-TMAREAALLGTPAISC 277 (346)
T ss_pred cccCCcccccHHHHHhhhhe--eecCCc-hHHHHHHHhCCceEEe
Confidence 2222 444566788888887 777543 3346999999999864
No 134
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=89.91 E-value=1.2 Score=45.58 Aligned_cols=92 Identities=15% Similarity=0.088 Sum_probs=64.0
Q ss_pred cCcccccccC--hH-hhhcCCCcceeeecc---CchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC
Q 047540 249 ETGFIARWCP--QE-EVLNHPAVGGFFTHS---GWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD 322 (388)
Q Consensus 249 ~~~~v~~~~p--q~-~~L~~~~~~~~Ithg---G~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 322 (388)
.++.+.++.+ +. .++..+++ +|.=+ |.++.+||+.+|+|+| .......| +...-|..+
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V-~d~~NG~li------ 472 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYV-EHNKNGYII------ 472 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceee-EcCCCcEEe------
Confidence 4566678777 43 37777777 87765 6779999999999999 22333444 555678888
Q ss_pred CCCCHHHHHHHHHHHHcCch-HHHHHHHHHHHHHHHH
Q 047540 323 NQVGRNEVEKLVRELMEGEK-GMQMRNKASEWKRFAE 358 (388)
Q Consensus 323 ~~~~~~~l~~ai~~vl~~~~-~~~~~~~a~~l~~~~~ 358 (388)
-+..+|.++|...|.+.+ ...+...+-+.++...
T Consensus 473 --~d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS 507 (519)
T TIGR03713 473 --DDISELLKALDYYLDNLKNWNYSLAYSIKLIDDYS 507 (519)
T ss_pred --CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh
Confidence 367899999999999874 2445555555444433
No 135
>PLN02939 transferase, transferring glycosyl groups
Probab=89.86 E-value=9.7 Score=41.62 Aligned_cols=83 Identities=10% Similarity=0.021 Sum_probs=53.4
Q ss_pred cCcccccccChH---hhhcCCCcceeeecc---Cc-hhHHHHHhhCCcEEecCCcc--chhHh--HHHHhhhhceeEEee
Q 047540 249 ETGFIARWCPQE---EVLNHPAVGGFFTHS---GW-NSTIESLCAGVPMICWPFLG--DQATN--CRYTCNEWGVGMDIT 317 (388)
Q Consensus 249 ~~~~v~~~~pq~---~~L~~~~~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~--DQ~~n--a~~v~~~~G~G~~l~ 317 (388)
+++.+..+.+.. .+++.+++ ||.-+ |. .+++||+++|+|.|+....+ |-..+ ...+.+.-+.|..+
T Consensus 837 drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf- 913 (977)
T PLN02939 837 NNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF- 913 (977)
T ss_pred CeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe-
Confidence 456666777764 48888888 77542 22 47899999999999876533 22211 11111223578888
Q ss_pred ecCCCCCCCHHHHHHHHHHHHc
Q 047540 318 NSGDDNQVGRNEVEKLVRELME 339 (388)
Q Consensus 318 ~~~~~~~~~~~~l~~ai~~vl~ 339 (388)
+ .-+.+++.++|.+++.
T Consensus 914 ----~-~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 914 ----L-TPDEQGLNSALERAFN 930 (977)
T ss_pred ----c-CCCHHHHHHHHHHHHH
Confidence 3 3578889988888764
No 136
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=88.75 E-value=1.8 Score=37.71 Aligned_cols=48 Identities=21% Similarity=0.198 Sum_probs=34.9
Q ss_pred hcCcccccccCh-H--h-hhcCCCcceeeeccC----chhHHHHHhhCCcEEecCCcc
Q 047540 248 KETGFIARWCPQ-E--E-VLNHPAVGGFFTHSG----WNSTIESLCAGVPMICWPFLG 297 (388)
Q Consensus 248 ~~~~~v~~~~pq-~--~-~L~~~~~~~~IthgG----~~s~~eal~~GvP~i~~P~~~ 297 (388)
.+|+.+.++++. . . ++..+++ +|+... -+++.||+.+|+|+|+-+..+
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~ 215 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGG 215 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence 457777888632 2 2 4444777 777665 578999999999999988654
No 137
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=87.36 E-value=13 Score=37.33 Aligned_cols=135 Identities=8% Similarity=0.062 Sum_probs=83.3
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCC-CCEEEEEcCCCCCCCCCCCchhHH--HhhhcCccc-ccccC-hH-hhhc
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSN-HPFLWIIRPDLVTGETADMPSEFE--VKAKETGFI-ARWCP-QE-EVLN 264 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~iw~~~~~~~~~~~~~~~~~~~--~~~~~~~~v-~~~~p-q~-~~L~ 264 (388)
..+++++ ....++.+....+..+ ..|-...+.. ..+.+. ++. +|+.+ .++.+ +. +++.
T Consensus 283 ~~~l~~t-------~s~~I~~i~~Lv~~lPd~~f~Iga~te--------~s~kL~~L~~y-~nvvly~~~~~~~l~~ly~ 346 (438)
T TIGR02919 283 KQALILT-------NSDQIEHLEEIVQALPDYHFHIAALTE--------MSSKLMSLDKY-DNVKLYPNITTQKIQELYQ 346 (438)
T ss_pred ccEEEEC-------CHHHHHHHHHHHHhCCCcEEEEEecCc--------ccHHHHHHHhc-CCcEEECCcChHHHHHHHH
Confidence 3566665 2445555555555544 4554433322 112221 233 55554 66677 43 4999
Q ss_pred CCCcceeeeccCc--hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCch
Q 047540 265 HPAVGGFFTHSGW--NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 265 ~~~~~~~IthgG~--~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~ 342 (388)
.+++-+-|+|+.- .++.||+.+|+|++..=..... ...+ .. |..+ ..-+.+++.++|.++|.+++
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~---~~~i-~~---g~l~------~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHN---RDFI-AS---ENIF------EHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHcCCcEEEEecccCC---cccc-cC---Ccee------cCCCHHHHHHHHHHHhcCHH
Confidence 9999999999874 6899999999999986543322 1223 22 5566 33567899999999999985
Q ss_pred HHHHHHHHHHHHHH
Q 047540 343 GMQMRNKASEWKRF 356 (388)
Q Consensus 343 ~~~~~~~a~~l~~~ 356 (388)
.++++..+-++.
T Consensus 414 --~~~~~~~~q~~~ 425 (438)
T TIGR02919 414 --QFRELLEQQREH 425 (438)
T ss_pred --HHHHHHHHHHHH
Confidence 255555444443
No 138
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=86.00 E-value=5.4 Score=37.82 Aligned_cols=143 Identities=11% Similarity=0.050 Sum_probs=78.7
Q ss_pred HHhcCCCCCCCcEEEeeCCCc---cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccc--
Q 047540 182 QWLDSKELPNSVVYVNFGSSV---YLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARW-- 256 (388)
Q Consensus 182 ~~l~~~~~~~~~v~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-- 256 (388)
+++.... +++.|.+..|+.. ..+.+.+.++++.+.+.+.++++..+++... +....+.+..+. ..+.+-
T Consensus 171 ~~~~~~~-~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e~----~~~~~i~~~~~~-~~l~g~~s 244 (319)
T TIGR02193 171 AFLGHAL-PAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAEK----QRAERIAEALPG-AVVLPKMS 244 (319)
T ss_pred hhhhccC-CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHHH----HHHHHHHhhCCC-CeecCCCC
Confidence 3444333 3567766666533 3567888999999876677777664532100 011112222221 122222
Q ss_pred cCh-HhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHH
Q 047540 257 CPQ-EEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVR 335 (388)
Q Consensus 257 ~pq-~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~ 335 (388)
++| ..+++++++ ||+. -.|.++=|.+.|+|+|++ +... +..+. .=+|-...+-....-..++.+++.++++
T Consensus 245 L~el~ali~~a~l--~I~~-DSgp~HlAaa~g~P~i~l-fg~t---~p~~~-~P~~~~~~~~~~~~~~~I~~~~V~~ai~ 316 (319)
T TIGR02193 245 LAEVAALLAGADA--VVGV-DTGLTHLAAALDKPTVTL-YGAT---DPGRT-GGYGKPNVALLGESGANPTPDEVLAALE 316 (319)
T ss_pred HHHHHHHHHcCCE--EEeC-CChHHHHHHHcCCCEEEE-ECCC---CHhhc-ccCCCCceEEccCccCCCCHHHHHHHHH
Confidence 334 348889988 9985 677888899999999985 1111 11111 1112211111111126799999999998
Q ss_pred HHH
Q 047540 336 ELM 338 (388)
Q Consensus 336 ~vl 338 (388)
++|
T Consensus 317 ~~~ 319 (319)
T TIGR02193 317 ELL 319 (319)
T ss_pred hhC
Confidence 764
No 139
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=85.72 E-value=5.9 Score=40.83 Aligned_cols=79 Identities=14% Similarity=0.148 Sum_probs=46.8
Q ss_pred hHhhhcCCCcceeee---ccCch-hHHHHHhhCCcEEecCCcc-chhHhHHHHhhhh-ceeEEeeecCCC-CCCCHHHHH
Q 047540 259 QEEVLNHPAVGGFFT---HSGWN-STIESLCAGVPMICWPFLG-DQATNCRYTCNEW-GVGMDITNSGDD-NQVGRNEVE 331 (388)
Q Consensus 259 q~~~L~~~~~~~~It---hgG~~-s~~eal~~GvP~i~~P~~~-DQ~~na~~v~~~~-G~G~~l~~~~~~-~~~~~~~l~ 331 (388)
..+++..+++ ||. +=|+| +++||+++|+|+|.-...+ ..... ..+ ..- ..|+.+...+.. -.-+.++|.
T Consensus 468 y~E~~~g~dl--~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v-~~~~~~gi~V~~r~~~~~~e~v~~La 543 (590)
T cd03793 468 YEEFVRGCHL--GVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHI-EDPESYGIYIVDRRFKSPDESVQQLT 543 (590)
T ss_pred hHHHhhhceE--EEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHh-ccCCCceEEEecCCccchHHHHHHHH
Confidence 3456666777 554 34654 7899999999999987633 22222 112 211 257777211111 134567788
Q ss_pred HHHHHHHcCc
Q 047540 332 KLVRELMEGE 341 (388)
Q Consensus 332 ~ai~~vl~~~ 341 (388)
+++.++++.+
T Consensus 544 ~~m~~~~~~~ 553 (590)
T cd03793 544 QYMYEFCQLS 553 (590)
T ss_pred HHHHHHhCCc
Confidence 8888888554
No 140
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=83.31 E-value=6.2 Score=42.71 Aligned_cols=101 Identities=10% Similarity=0.151 Sum_probs=64.7
Q ss_pred hhhcCCCcceeeec---cCch-hHHHHHhhCCc---EEecCCccchhHhHHHHhhhhc-eeEEeeecCCCCCCCHHHHHH
Q 047540 261 EVLNHPAVGGFFTH---SGWN-STIESLCAGVP---MICWPFLGDQATNCRYTCNEWG-VGMDITNSGDDNQVGRNEVEK 332 (388)
Q Consensus 261 ~~L~~~~~~~~Ith---gG~~-s~~eal~~GvP---~i~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~~~~~~l~~ 332 (388)
.+++.+++ ||.- -|+| ++.|++++|+| ++++.-+.- .+. .+| .|+.+ + ..+.+++++
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G---~~~----~l~~~allV-----n-P~D~~~lA~ 435 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAG---AGQ----SLGAGALLV-----N-PWNITEVSS 435 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCcC---chh----hhcCCeEEE-----C-CCCHHHHHH
Confidence 47788888 6644 4886 57899999999 444442221 111 133 57888 4 368889999
Q ss_pred HHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHhh
Q 047540 333 LVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPVIKLI 382 (388)
Q Consensus 333 ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~~~~ 382 (388)
+|.++|+.+. ++.+++.+++.+.++ .-+...-..+|++.|....
T Consensus 436 AI~~aL~m~~-~er~~r~~~~~~~v~-----~~~~~~Wa~~fl~~l~~~~ 479 (797)
T PLN03063 436 AIKEALNMSD-EERETRHRHNFQYVK-----THSAQKWADDFMSELNDII 479 (797)
T ss_pred HHHHHHhCCH-HHHHHHHHHHHHhhh-----hCCHHHHHHHHHHHHHHHh
Confidence 9999998332 124555666666666 2455566667777766553
No 141
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=80.38 E-value=5.1 Score=37.62 Aligned_cols=83 Identities=13% Similarity=0.145 Sum_probs=48.7
Q ss_pred ccChHhhhcCCCcceeeeccCchhH-HHHHhhCCcEEecCCccchhH--hHHHHhhhhceeEEeeecCCCCCCCHHHHHH
Q 047540 256 WCPQEEVLNHPAVGGFFTHSGWNST-IESLCAGVPMICWPFLGDQAT--NCRYTCNEWGVGMDITNSGDDNQVGRNEVEK 332 (388)
Q Consensus 256 ~~pq~~~L~~~~~~~~IthgG~~s~-~eal~~GvP~i~~P~~~DQ~~--na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ 332 (388)
|-...++|.++++ .|.- +||. -.++-.|||+|.+|-.+-|+. .|.+=..-+|+.+.+ - .-.+..-..
T Consensus 302 qqsfadiLH~ada--algm--AGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltl-----v-~~~aq~a~~ 371 (412)
T COG4370 302 QQSFADILHAADA--ALGM--AGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTL-----V-RPEAQAAAQ 371 (412)
T ss_pred HHHHHHHHHHHHH--HHHh--ccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeee-----c-CCchhhHHH
Confidence 3333456665555 3322 2443 345778999999999998876 444433446777766 1 122223334
Q ss_pred HHHHHHcCchHHHHHHHHH
Q 047540 333 LVRELMEGEKGMQMRNKAS 351 (388)
Q Consensus 333 ai~~vl~~~~~~~~~~~a~ 351 (388)
+.++++.|+. +.++++
T Consensus 372 ~~q~ll~dp~---r~~air 387 (412)
T COG4370 372 AVQELLGDPQ---RLTAIR 387 (412)
T ss_pred HHHHHhcChH---HHHHHH
Confidence 4455999987 555544
No 142
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=80.27 E-value=8.8 Score=38.69 Aligned_cols=103 Identities=15% Similarity=0.195 Sum_probs=61.8
Q ss_pred ccccChHh---hhcCCCcceeee---ccCch-hHHHHHhhCCc----EEecCCccchhHhHHHHhhhhceeEEeeecCCC
Q 047540 254 ARWCPQEE---VLNHPAVGGFFT---HSGWN-STIESLCAGVP----MICWPFLGDQATNCRYTCNEWGVGMDITNSGDD 322 (388)
Q Consensus 254 ~~~~pq~~---~L~~~~~~~~It---hgG~~-s~~eal~~GvP----~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 322 (388)
.+++++.+ +++.+++ ||. +-|+| ++.||+++|+| +|+--+.+- . +....|+.+ +
T Consensus 346 ~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~-----~---~~~~~g~lv-----~ 410 (460)
T cd03788 346 YRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGA-----A---EELSGALLV-----N 410 (460)
T ss_pred eCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccc-----h---hhcCCCEEE-----C
Confidence 45667654 6788888 663 34654 57999999999 544433221 1 112346777 3
Q ss_pred CCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHH
Q 047540 323 NQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPV 378 (388)
Q Consensus 323 ~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l 378 (388)
.-+.++++++|.++++++. ++.+++.++..+.++ .-+...-..+++..|
T Consensus 411 -p~d~~~la~ai~~~l~~~~-~e~~~~~~~~~~~v~-----~~~~~~w~~~~l~~l 459 (460)
T cd03788 411 -PYDIDEVADAIHRALTMPL-EERRERHRKLREYVR-----THDVQAWANSFLDDL 459 (460)
T ss_pred -CCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----hCCHHHHHHHHHHhh
Confidence 3578899999999998763 123333444444443 355555556666554
No 143
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=79.59 E-value=66 Score=31.61 Aligned_cols=63 Identities=27% Similarity=0.223 Sum_probs=38.1
Q ss_pred eeeccCchhHHHHHhhCCcEEe--cCCccch------hHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCch
Q 047540 271 FFTHSGWNSTIESLCAGVPMIC--WPFLGDQ------ATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 271 ~IthgG~~s~~eal~~GvP~i~--~P~~~DQ------~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~ 342 (388)
+-|+ |..++..|+.+|.|+.. ++.++|- -.|+-++...+-..+.+ ++.+++..+|.++++|++
T Consensus 248 VEt~-~a~~f~~sl~~g~~V~lp~i~s~AdglaV~~Vg~~tf~~a~~~~d~vvv--------V~~~ei~aaI~~l~edek 318 (457)
T KOG1250|consen 248 VETE-GAHSFNASLKAGKPVTLPKITSLADGLAVKTVGENTFELAQKLVDRVVV--------VEDDEIAAAILRLFEDEK 318 (457)
T ss_pred Eeec-CcHHHHHHHhcCCeeecccccchhcccccchhhHHHHHHHHhcCceEEE--------eccHHHHHHHHHHHHhhh
Confidence 3444 56778888888888632 2223331 12333332333334444 788999999999998875
No 144
>PRK14099 glycogen synthase; Provisional
Probab=79.25 E-value=32 Score=34.93 Aligned_cols=87 Identities=9% Similarity=0.093 Sum_probs=48.0
Q ss_pred hcCc-ccccccChHh-hh-cCCCcceeeec---cCc-hhHHHHHhhCCcEEecCCcc--chhHhHHHHhh--hhceeEEe
Q 047540 248 KETG-FIARWCPQEE-VL-NHPAVGGFFTH---SGW-NSTIESLCAGVPMICWPFLG--DQATNCRYTCN--EWGVGMDI 316 (388)
Q Consensus 248 ~~~~-~v~~~~pq~~-~L-~~~~~~~~Ith---gG~-~s~~eal~~GvP~i~~P~~~--DQ~~na~~v~~--~~G~G~~l 316 (388)
++++ .+.+|-.+.. ++ ..+++ ||.- =|. .+.+||+++|+|.|+....+ |-..+.....+ .-+.|..+
T Consensus 349 ~~~v~~~~G~~~~l~~~~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~ 426 (485)
T PRK14099 349 PGQIGVVIGYDEALAHLIQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQF 426 (485)
T ss_pred CCCEEEEeCCCHHHHHHHHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEe
Confidence 3344 3456633333 33 45676 7653 333 36799999997766654322 22111110001 01578888
Q ss_pred eecCCCCCCCHHHHHHHHHH---HHcCch
Q 047540 317 TNSGDDNQVGRNEVEKLVRE---LMEGEK 342 (388)
Q Consensus 317 ~~~~~~~~~~~~~l~~ai~~---vl~~~~ 342 (388)
+ .-+.+++.++|.+ +++|++
T Consensus 427 -----~-~~d~~~La~ai~~a~~l~~d~~ 449 (485)
T PRK14099 427 -----S-PVTADALAAALRKTAALFADPV 449 (485)
T ss_pred -----C-CCCHHHHHHHHHHHHHHhcCHH
Confidence 3 3578899999987 555653
No 145
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=77.55 E-value=0.59 Score=38.29 Aligned_cols=36 Identities=22% Similarity=0.093 Sum_probs=29.4
Q ss_pred CccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHH
Q 047540 43 SVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSF 78 (388)
Q Consensus 43 ~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~ 78 (388)
..|+++.+.....+..+||++|||.+.....+.+..
T Consensus 100 ~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~~~~ 135 (139)
T PF03033_consen 100 ADDVIIAAPLAFAAALVAEQLGIPGVANRLFPWFAT 135 (139)
T ss_dssp ECCEECHHHHHTHHHHHHHHHTS-EEEEESSGGGST
T ss_pred cchHHHhhhhcCccceeEhhhCchHHHHhhCCcCcC
Confidence 678888888888899999999999999877776543
No 146
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=74.39 E-value=4.3 Score=39.41 Aligned_cols=96 Identities=11% Similarity=0.058 Sum_probs=57.2
Q ss_pred Cccc-ccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHh---hhhceeEEeeecCCCCCC
Q 047540 250 TGFI-ARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTC---NEWGVGMDITNSGDDNQV 325 (388)
Q Consensus 250 ~~~v-~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~---~~~G~G~~l~~~~~~~~~ 325 (388)
++.. .+..+-.++|..+++ +||-- .+.+.|.+..++|+|......|++...+-+. +....|..+ -
T Consensus 253 ~i~~~~~~~~~~~ll~~aDi--LITDy-SSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~--------~ 321 (369)
T PF04464_consen 253 NIIFVSDNEDIYDLLAAADI--LITDY-SSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIV--------Y 321 (369)
T ss_dssp TEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EE--------S
T ss_pred cEEECCCCCCHHHHHHhcCE--EEEec-hhHHHHHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCcee--------C
Confidence 4433 344456789999999 99976 3468899999999998887666653221110 112233333 5
Q ss_pred CHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH
Q 047540 326 GRNEVEKLVRELMEGEKGMQMRNKASEWKRFAE 358 (388)
Q Consensus 326 ~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~ 358 (388)
+.++|.++|..++++.. .++++.++..+.+-
T Consensus 322 ~~~eL~~~i~~~~~~~~--~~~~~~~~~~~~~~ 352 (369)
T PF04464_consen 322 NFEELIEAIENIIENPD--EYKEKREKFRDKFF 352 (369)
T ss_dssp SHHHHHHHHTTHHHHHH--HTHHHHHHHHHHHS
T ss_pred CHHHHHHHHHhhhhCCH--HHHHHHHHHHHHhC
Confidence 77899999998887654 25555666666654
No 147
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=73.47 E-value=20 Score=33.12 Aligned_cols=95 Identities=14% Similarity=0.131 Sum_probs=58.0
Q ss_pred CCcEEEeeCCCc---cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhh-hcCcc-cccc--cCh-Hhh
Q 047540 191 NSVVYVNFGSSV---YLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKA-KETGF-IARW--CPQ-EEV 262 (388)
Q Consensus 191 ~~~v~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~-~~~~~-v~~~--~pq-~~~ 262 (388)
++.|.+..|+.. ..+.+.+.++++.+.+.+.++++..+.++.. .-..+.+.. ..++. +.+- +.+ ..+
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~e~~-----~~~~i~~~~~~~~~~~~~~~~~l~e~~~l 195 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPAERE-----LAEEIAAALGGPRVVNLAGKTSLRELAAL 195 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechhhHH-----HHHHHHHhcCCCccccCcCCCCHHHHHHH
Confidence 367888877753 3567889999999887788887654432100 111121211 11211 2222 223 348
Q ss_pred hcCCCcceeeeccCchhHHHHHhhCCcEEec
Q 047540 263 LNHPAVGGFFTHSGWNSTIESLCAGVPMICW 293 (388)
Q Consensus 263 L~~~~~~~~IthgG~~s~~eal~~GvP~i~~ 293 (388)
++++++ ||+.- .|.++=|.+.|+|+|++
T Consensus 196 i~~~~l--~I~~D-sg~~HlA~a~~~p~i~l 223 (279)
T cd03789 196 LARADL--VVTND-SGPMHLAAALGTPTVAL 223 (279)
T ss_pred HHhCCE--EEeeC-CHHHHHHHHcCCCEEEE
Confidence 888888 99974 36777778999999886
No 148
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=71.97 E-value=17 Score=33.49 Aligned_cols=41 Identities=22% Similarity=0.232 Sum_probs=31.8
Q ss_pred ccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCC
Q 047540 252 FIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPF 295 (388)
Q Consensus 252 ~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~ 295 (388)
.+.+-++-.++|.+++. +||-. .+.-+||+.+|+|++++..
T Consensus 186 ~~~~~~~~~~Ll~~s~~--Vvtin-StvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 186 IIDDDVNLYELLEQSDA--VVTIN-STVGLEALLHGKPVIVFGR 226 (269)
T ss_pred EECCCCCHHHHHHhCCE--EEEEC-CHHHHHHHHcCCceEEecC
Confidence 34555677789999998 88764 3466899999999999764
No 149
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=68.06 E-value=12 Score=40.04 Aligned_cols=110 Identities=11% Similarity=0.055 Sum_probs=65.4
Q ss_pred ccccChHh---hhcCCCcceeeec---cCch-hHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCC
Q 047540 254 ARWCPQEE---VLNHPAVGGFFTH---SGWN-STIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVG 326 (388)
Q Consensus 254 ~~~~pq~~---~L~~~~~~~~Ith---gG~~-s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~ 326 (388)
.+++++.+ +++.+++ |+.- -|+| ++.|++++|+|-.+.|...+--.-+..+ ..|+.+ + ..+
T Consensus 347 ~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l----~~~llv-----~-P~d 414 (726)
T PRK14501 347 YRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL----AEALLV-----N-PND 414 (726)
T ss_pred eCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhHHh----CcCeEE-----C-CCC
Confidence 45667664 6778887 5543 3665 5789999977522222222111112222 237787 4 357
Q ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHh
Q 047540 327 RNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPVIKL 381 (388)
Q Consensus 327 ~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~~~ 381 (388)
.++++++|.++|+.+.. +.+++.+++.+.++ ..+...-.+++++.+...
T Consensus 415 ~~~la~ai~~~l~~~~~-e~~~r~~~~~~~v~-----~~~~~~w~~~~l~~l~~~ 463 (726)
T PRK14501 415 IEGIAAAIKRALEMPEE-EQRERMQAMQERLR-----RYDVHKWASDFLDELREA 463 (726)
T ss_pred HHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHHHH
Confidence 88999999999986521 24444445555544 356666677777777665
No 150
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=64.68 E-value=44 Score=31.75 Aligned_cols=96 Identities=9% Similarity=0.060 Sum_probs=59.0
Q ss_pred CCCcEEEeeCCC-c---cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcc-ccc--ccCh-Hh
Q 047540 190 PNSVVYVNFGSS-V---YLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGF-IAR--WCPQ-EE 261 (388)
Q Consensus 190 ~~~~v~vs~Gs~-~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~--~~pq-~~ 261 (388)
+++.|.+..|+. . ..+.+.+.++++.+.+.+.+++.. +++... +....+.+..+.++. +.+ -+.+ ..
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~-G~~~e~----~~~~~i~~~~~~~~~~l~g~~sL~el~a 247 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLF-GSAKDH----PAGNEIEALLPGELRNLAGETSLDEAVD 247 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEE-EChhhH----HHHHHHHHhCCcccccCCCCCCHHHHHH
Confidence 357888888874 2 356788889999887667776654 432110 011122222222221 222 2233 34
Q ss_pred hhcCCCcceeeeccCchhHHHHHhhCCcEEec
Q 047540 262 VLNHPAVGGFFTHSGWNSTIESLCAGVPMICW 293 (388)
Q Consensus 262 ~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~ 293 (388)
+++++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 248 li~~a~l--~I~~-DSGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 248 LIALAKA--VVTN-DSGLMHVAAALNRPLVAL 276 (334)
T ss_pred HHHhCCE--EEee-CCHHHHHHHHcCCCEEEE
Confidence 8888988 9985 567788899999999875
No 151
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=63.63 E-value=18 Score=30.76 Aligned_cols=40 Identities=25% Similarity=0.413 Sum_probs=25.0
Q ss_pred ccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHH-----HHh-CCCeEEE
Q 047540 26 MLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAA-----QQL-GIPIALF 70 (388)
Q Consensus 26 ~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A-----~~l-gIP~v~~ 70 (388)
+.+.+.++|++. +||+||+-..++....++ ..+ .+|.+.+
T Consensus 77 ~~~~l~~~l~~~-----~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tv 122 (169)
T PF06925_consen 77 FARRLIRLLREF-----QPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTV 122 (169)
T ss_pred HHHHHHHHHhhc-----CCCEEEECCcchhhhHHHHHHHhhcccCCcEEEE
Confidence 555666666665 999999998664443122 223 4776655
No 152
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=61.55 E-value=19 Score=32.53 Aligned_cols=94 Identities=11% Similarity=0.096 Sum_probs=52.1
Q ss_pred CCCcEEEeeCCCc---cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcC----c-ccccc--cCh
Q 047540 190 PNSVVYVNFGSSV---YLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKET----G-FIARW--CPQ 259 (388)
Q Consensus 190 ~~~~v~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~----~-~v~~~--~pq 259 (388)
+++.|.+..|+.. ..+.+.+.++++.|.+.+.+++...+..+. .....+...+. + .+.+- +.+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~e 176 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQ-------EKEIADQIAAGLQNPVINLAGKTSLRE 176 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHH-------HHHHHHHHHTTHTTTTEEETTTS-HHH
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHH-------HHHHHHHHHHhcccceEeecCCCCHHH
Confidence 3578888888864 356788999999998888666544332110 01111122211 1 12221 233
Q ss_pred -HhhhcCCCcceeeeccCchhHHHHHhhCCcEEec
Q 047540 260 -EEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICW 293 (388)
Q Consensus 260 -~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~ 293 (388)
..+++++++ ||+. ..|.++=|.+.|+|+|++
T Consensus 177 ~~ali~~a~~--~I~~-Dtg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 177 LAALISRADL--VIGN-DTGPMHLAAALGTPTVAL 208 (247)
T ss_dssp HHHHHHTSSE--EEEE-SSHHHHHHHHTT--EEEE
T ss_pred HHHHHhcCCE--EEec-CChHHHHHHHHhCCEEEE
Confidence 348889988 8885 567889999999999998
No 153
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=60.53 E-value=1.7e+02 Score=28.43 Aligned_cols=129 Identities=13% Similarity=0.201 Sum_probs=76.2
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHHhc---------CC-CCEEEEEcCCCCCCCCCCCchhHHHhhh----cCccc-c
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGLVN---------SN-HPFLWIIRPDLVTGETADMPSEFEVKAK----ETGFI-A 254 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~---------~~-~~~iw~~~~~~~~~~~~~~~~~~~~~~~----~~~~v-~ 254 (388)
+++.++||-- +..+.+.+..+++|+.. .+ ..++..+.+..- +.+...+.+. .++.+ .
T Consensus 253 ~~pallvsST--swTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP------lkE~Y~~~I~~~~~~~v~~~t 324 (444)
T KOG2941|consen 253 ERPALLVSST--SWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP------LKEKYSQEIHEKNLQHVQVCT 324 (444)
T ss_pred CCCeEEEecC--CCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc------hhHHHHHHHHHhcccceeeee
Confidence 3578888732 22334556777777761 11 244555543211 2222222221 34444 7
Q ss_pred cccCh---HhhhcCCCcceeeeccCch-----hHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCC
Q 047540 255 RWCPQ---EEVLNHPAVGGFFTHSGWN-----STIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVG 326 (388)
Q Consensus 255 ~~~pq---~~~L~~~~~~~~IthgG~~-----s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~ 326 (388)
.|+.- ..+|+.++++..+|-.-.| -+..-.-+|+|++.+-+-- -..+|++---|... .+
T Consensus 325 pWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkc-----l~ELVkh~eNGlvF--------~D 391 (444)
T KOG2941|consen 325 PWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKC-----LDELVKHGENGLVF--------ED 391 (444)
T ss_pred cccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchh-----HHHHHhcCCCceEe--------cc
Confidence 78643 4499999998888876554 4667778899988876532 11233554457777 46
Q ss_pred HHHHHHHHHHHHc
Q 047540 327 RNEVEKLVRELME 339 (388)
Q Consensus 327 ~~~l~~ai~~vl~ 339 (388)
.+++++.+.-+++
T Consensus 392 s~eLa~ql~~lf~ 404 (444)
T KOG2941|consen 392 SEELAEQLQMLFK 404 (444)
T ss_pred HHHHHHHHHHHHh
Confidence 7889988888877
No 154
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=58.69 E-value=1.6e+02 Score=27.49 Aligned_cols=75 Identities=17% Similarity=0.221 Sum_probs=50.2
Q ss_pred HHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCc-----cc-----ccccChHhhhcCCCcceeeeccCc-hhH
Q 047540 212 VAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETG-----FI-----ARWCPQEEVLNHPAVGGFFTHSGW-NST 280 (388)
Q Consensus 212 ~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v-----~~~~pq~~~L~~~~~~~~IthgG~-~s~ 280 (388)
+.+.+++.|.+|+.+.+.. .|+.....++.|. .+ .++=|..+.|+.++. +|+-... |-+
T Consensus 189 l~k~l~~~g~~~lisfSRR--------Tp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Ady--ii~TaDSinM~ 258 (329)
T COG3660 189 LVKILENQGGSFLISFSRR--------TPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADY--IISTADSINMC 258 (329)
T ss_pred HHHHHHhCCceEEEEeecC--------CcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcce--EEEecchhhhh
Confidence 5556677889999888765 3443333333322 12 255688899988887 7777665 667
Q ss_pred HHHHhhCCcEEe--cCCc
Q 047540 281 IESLCAGVPMIC--WPFL 296 (388)
Q Consensus 281 ~eal~~GvP~i~--~P~~ 296 (388)
.||...|+|+.+ .|.+
T Consensus 259 sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 259 SEAASTGKPVFILEPPNF 276 (329)
T ss_pred HHHhccCCCeEEEecCCc
Confidence 899999999765 3444
No 155
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=55.22 E-value=21 Score=34.30 Aligned_cols=37 Identities=22% Similarity=0.419 Sum_probs=25.7
Q ss_pred HHHHHHHHhhcCCCCccEEEEcCCcch----------HHHHHHHhCCCeEEE
Q 047540 29 PFLDLLQKLKSSSNSVSCIISDGFMPF----------TVTAAQQLGIPIALF 70 (388)
Q Consensus 29 ~~~~ll~~l~~~~~~~D~iI~D~~~~~----------~~~~A~~lgIP~v~~ 70 (388)
.+.++++.+ +||++|+-+.+-+ +..+.++++||+++-
T Consensus 71 ~i~~mv~~~-----~pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vta 117 (349)
T PF07355_consen 71 KILEMVKKL-----KPDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVTA 117 (349)
T ss_pred HHHHHHHhc-----CCCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEEE
Confidence 334444454 9999999995532 334567899999875
No 156
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=54.76 E-value=81 Score=30.30 Aligned_cols=97 Identities=13% Similarity=0.180 Sum_probs=59.4
Q ss_pred CCcEEEeeCCCc---cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhh-cC-cccccc--cCh-Hhh
Q 047540 191 NSVVYVNFGSSV---YLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAK-ET-GFIARW--CPQ-EEV 262 (388)
Q Consensus 191 ~~~v~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~-~~-~~v~~~--~pq-~~~ 262 (388)
++.|.+..|+.. ..+.+.+.++++.|.+.+.++++..+.++.+. .....+.+... .+ +-+.+- +.+ ..+
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~---~~~~~i~~~~~~~~~~~l~g~~sL~el~al 259 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDL---ACVNEIAQGCQTPPVTALAGKTTFPELGAL 259 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHH---HHHHHHHHhcCCCccccccCCCCHHHHHHH
Confidence 477888888853 35678889999999877888776644321100 00011111111 11 112222 334 348
Q ss_pred hcCCCcceeeeccCchhHHHHHhhCCcEEec
Q 047540 263 LNHPAVGGFFTHSGWNSTIESLCAGVPMICW 293 (388)
Q Consensus 263 L~~~~~~~~IthgG~~s~~eal~~GvP~i~~ 293 (388)
++++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 260 i~~a~l--~v~n-DSGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 260 IDHAQL--FIGV-DSAPAHIAAAVNTPLICL 287 (352)
T ss_pred HHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 889998 9986 567788899999999875
No 157
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=54.31 E-value=50 Score=31.68 Aligned_cols=96 Identities=9% Similarity=0.019 Sum_probs=58.6
Q ss_pred CCCcEEEeeCCCc----cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhc----C-cccccc--cC
Q 047540 190 PNSVVYVNFGSSV----YLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKE----T-GFIARW--CP 258 (388)
Q Consensus 190 ~~~~v~vs~Gs~~----~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~----~-~~v~~~--~p 258 (388)
+++.|.+..|+.. ..+.+.+.++++.|...+.+++..-+..+.+ ....+....+. + +-+.+- +.
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e~~-----~~~~i~~~~~~~~~~~~~~l~g~~sL~ 253 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKDHE-----AGNEILAALNTEQQAWCRNLAGETQLE 253 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHhHH-----HHHHHHHhcccccccceeeccCCCCHH
Confidence 3578888888742 3567888999998876677766543322110 11111111111 1 112222 33
Q ss_pred hH-hhhcCCCcceeeeccCchhHHHHHhhCCcEEec
Q 047540 259 QE-EVLNHPAVGGFFTHSGWNSTIESLCAGVPMICW 293 (388)
Q Consensus 259 q~-~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~ 293 (388)
+. .+++++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 254 el~ali~~a~l--~I~n-DTGp~HlAaA~g~P~val 286 (348)
T PRK10916 254 QAVILIAACKA--IVTN-DSGLMHVAAALNRPLVAL 286 (348)
T ss_pred HHHHHHHhCCE--EEec-CChHHHHHHHhCCCEEEE
Confidence 33 48889988 9985 677889999999999874
No 158
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=54.29 E-value=70 Score=30.25 Aligned_cols=131 Identities=10% Similarity=-0.029 Sum_probs=72.3
Q ss_pred CcEE-EeeCCCc--cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCccccc--ccChH-hhhcC
Q 047540 192 SVVY-VNFGSSV--YLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIAR--WCPQE-EVLNH 265 (388)
Q Consensus 192 ~~v~-vs~Gs~~--~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~pq~-~~L~~ 265 (388)
+.|. +-.||.. ..+.+.+.++++.+.+.+.++++..++..... ..+.+.+. ..++.+.+ -+.+. .++++
T Consensus 179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~e~~----~~~~i~~~-~~~~~l~g~~sL~elaali~~ 253 (322)
T PRK10964 179 PYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEHEEQ----RAKRLAEG-FPYVEVLPKLSLEQVARVLAG 253 (322)
T ss_pred CeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHH----HHHHHHcc-CCcceecCCCCHHHHHHHHHh
Confidence 5554 4444432 36778899999998776777765445321000 01111111 11222222 23443 48899
Q ss_pred CCcceeeeccCchhHHHHHhhCCcEEec--CCccch----hHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHc
Q 047540 266 PAVGGFFTHSGWNSTIESLCAGVPMICW--PFLGDQ----ATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELME 339 (388)
Q Consensus 266 ~~~~~~IthgG~~s~~eal~~GvP~i~~--P~~~DQ----~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~ 339 (388)
+++ ||+. ..|.++=|.+.|+|+|++ |-.... ..|...+ .. .+.++ .+++.+.+.++++++|.
T Consensus 254 a~l--~I~n-DSGp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~-~~--~~~cm------~~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 254 AKA--VVSV-DTGLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHAC-RS--PGKSM------ADLSAETVFQKLETLIS 321 (322)
T ss_pred CCE--EEec-CCcHHHHHHHhCCCEEEEECCCCcccccCCCCCceee-cC--CCccc------ccCCHHHHHHHHHHHhh
Confidence 998 9985 567889999999999985 321111 0111111 10 01122 57899999998888763
No 159
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=54.27 E-value=74 Score=30.37 Aligned_cols=97 Identities=13% Similarity=0.154 Sum_probs=59.6
Q ss_pred CCcEEEeeCCCc---cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhc-Ccc-cccc--cChH-hh
Q 047540 191 NSVVYVNFGSSV---YLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKE-TGF-IARW--CPQE-EV 262 (388)
Q Consensus 191 ~~~v~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~-v~~~--~pq~-~~ 262 (388)
++.|.+..|+.. ..+.+.+.++++.|...+.++++..+....+ ......+.+..+. ++. +.+- +.+. .+
T Consensus 181 ~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e---~~~~~~i~~~~~~~~~~~l~g~~sL~el~al 257 (344)
T TIGR02201 181 QNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDE---LAMVNEIAQGCQTPRVTSLAGKLTLPQLAAL 257 (344)
T ss_pred CCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHH---HHHHHHHHhhCCCCcccccCCCCCHHHHHHH
Confidence 467888888753 3567888899998877778877654322100 0001111111111 111 2222 3343 48
Q ss_pred hcCCCcceeeeccCchhHHHHHhhCCcEEec
Q 047540 263 LNHPAVGGFFTHSGWNSTIESLCAGVPMICW 293 (388)
Q Consensus 263 L~~~~~~~~IthgG~~s~~eal~~GvP~i~~ 293 (388)
++++++ ||+. -.|.++=|.+.|+|+|++
T Consensus 258 i~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 258 IDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred HHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 889988 9997 678899999999999986
No 160
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=52.69 E-value=2e+02 Score=27.92 Aligned_cols=136 Identities=13% Similarity=0.102 Sum_probs=81.0
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhc---CCCCEEEEEcCCCCCCCCCCCchhHH---Hhh-h-cCccc-ccccChH-
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVN---SNHPFLWIIRPDLVTGETADMPSEFE---VKA-K-ETGFI-ARWCPQE- 260 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~iw~~~~~~~~~~~~~~~~~~~---~~~-~-~~~~v-~~~~pq~- 260 (388)
+..+.|-.|..+..+.++++ +++++.+ ...+++.-.+=+... + +.-+... .+. + +++.+ .+++|-.
T Consensus 183 ~~~ltILvGNSgd~sNnHie-aL~~L~~~~~~~~kIivPLsYg~~n-~--~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~e 258 (360)
T PF07429_consen 183 KGKLTILVGNSGDPSNNHIE-ALEALKQQFGDDVKIIVPLSYGANN-Q--AYIQQVIQAGKELFGAENFQILTEFMPFDE 258 (360)
T ss_pred CCceEEEEcCCCCCCccHHH-HHHHHHHhcCCCeEEEEECCCCCch-H--HHHHHHHHHHHHhcCccceeEhhhhCCHHH
Confidence 45667777877765554433 3333332 345666554421100 0 0000111 111 2 45654 6787755
Q ss_pred --hhhcCCCcceeeec--cCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHH
Q 047540 261 --EVLNHPAVGGFFTH--SGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRE 336 (388)
Q Consensus 261 --~~L~~~~~~~~Ith--gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ 336 (388)
.+|+.++++.|.+. =|.|++.-.+..|+|++.-- +..--+.+ .+.|+-+... ++.++...++++=++
T Consensus 259 Yl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~~----~np~~~~l-~~~~ipVlf~----~d~L~~~~v~ea~rq 329 (360)
T PF07429_consen 259 YLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLSR----DNPFWQDL-KEQGIPVLFY----GDELDEALVREAQRQ 329 (360)
T ss_pred HHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEec----CChHHHHH-HhCCCeEEec----cccCCHHHHHHHHHH
Confidence 48999999777764 58899999999999997643 22222334 3458877771 378999999999888
Q ss_pred HHc
Q 047540 337 LME 339 (388)
Q Consensus 337 vl~ 339 (388)
+..
T Consensus 330 l~~ 332 (360)
T PF07429_consen 330 LAN 332 (360)
T ss_pred Hhh
Confidence 764
No 161
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=52.42 E-value=65 Score=27.31 Aligned_cols=98 Identities=11% Similarity=0.097 Sum_probs=53.3
Q ss_pred hHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccc-
Q 047540 178 TECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARW- 256 (388)
Q Consensus 178 ~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 256 (388)
.++-++|.+.. ...++.|.. .......++..+.+..++=++...... +... .......++
T Consensus 21 ~~lg~~La~~g----~~lv~Gg~~-----GlM~a~a~ga~~~gg~viGVlp~~l~~------~~~~----~~~~i~~~~~ 81 (159)
T TIGR00725 21 YRLGKELAKKG----HILINGGRT-----GVMEAVSKGAREAGGLVVGILPDEDFA------GNPY----LTIKVKTGMN 81 (159)
T ss_pred HHHHHHHHHCC----CEEEcCCch-----hHHHHHHHHHHHCCCeEEEECChhhcc------CCCC----ceEEEECCCc
Confidence 45667776654 566664443 344556666555666666554322100 0000 011112333
Q ss_pred cChHhhhc-CCCcceeeeccCchhH---HHHHhhCCcEEecCC
Q 047540 257 CPQEEVLN-HPAVGGFFTHSGWNST---IESLCAGVPMICWPF 295 (388)
Q Consensus 257 ~pq~~~L~-~~~~~~~IthgG~~s~---~eal~~GvP~i~~P~ 295 (388)
.+...++. .++ ..++--||.||+ .|++.+++|+++++.
T Consensus 82 ~~Rk~~m~~~sd-a~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 82 FARNFILVRSAD-VVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred chHHHHHHHHCC-EEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 44555444 444 345667888886 566889999999885
No 162
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=51.54 E-value=2.2e+02 Score=27.19 Aligned_cols=133 Identities=15% Similarity=0.098 Sum_probs=76.7
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHh---cCCCCEEEEEcCCCCCCCCCCCchhHH---Hhh-h-cCccc-ccccCh---
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLV---NSNHPFLWIIRPDLVTGETADMPSEFE---VKA-K-ETGFI-ARWCPQ--- 259 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~---~~~~~~iw~~~~~~~~~~~~~~~~~~~---~~~-~-~~~~v-~~~~pq--- 259 (388)
..+-|-.|..+..+.+++ ++++++. ..+.+++.-.+=+.... ..-.... .++ + +++.+ .+++|-
T Consensus 145 ~~~tIlvGNSgd~SN~Hi-e~L~~l~~~~~~~v~ii~PlsYp~gn~---~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eY 220 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHI-EALRALHQQFGDNVKIIVPMGYPANNQ---AYIEEVRQAGLALFGAENFQILTEKLPFDDY 220 (322)
T ss_pred CceEEEEeCCCCCcccHH-HHHHHHHHHhCCCeEEEEECCcCCCCH---HHHHHHHHHHHHhcCcccEEehhhhCCHHHH
Confidence 346666677665554443 3444443 23346665554210000 0000111 111 3 56654 677765
Q ss_pred HhhhcCCCcceeeec--cCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC-CCCCHHHHHHHHHH
Q 047540 260 EEVLNHPAVGGFFTH--SGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD-NQVGRNEVEKLVRE 336 (388)
Q Consensus 260 ~~~L~~~~~~~~Ith--gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~l~~ai~~ 336 (388)
..+|+.++++.|+++ =|.||+.-.++.|+|+++--. -+.+.- + .+.|+=+.. + +.++...+.++=++
T Consensus 221 l~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r~---n~fwqd-l-~e~gv~Vlf-----~~d~L~~~~v~e~~rq 290 (322)
T PRK02797 221 LALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSRD---NPFWQD-L-TEQGLPVLF-----TGDDLDEDIVREAQRQ 290 (322)
T ss_pred HHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEecC---CchHHH-H-HhCCCeEEe-----cCCcccHHHHHHHHHH
Confidence 459999999888876 478999999999999987532 122222 2 235787766 4 67888888777555
Q ss_pred HH
Q 047540 337 LM 338 (388)
Q Consensus 337 vl 338 (388)
+.
T Consensus 291 l~ 292 (322)
T PRK02797 291 LA 292 (322)
T ss_pred HH
Confidence 43
No 163
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=50.20 E-value=59 Score=31.15 Aligned_cols=95 Identities=12% Similarity=0.066 Sum_probs=58.6
Q ss_pred CCcEEEeeC-CCc---cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccc--cChH-hhh
Q 047540 191 NSVVYVNFG-SSV---YLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARW--CPQE-EVL 263 (388)
Q Consensus 191 ~~~v~vs~G-s~~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~pq~-~~L 263 (388)
++.|.++.| |.+ ..+.+.+.++++.+.+.+.++++..+ +... +..+.+.+.......+.+- +.|. .++
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~-~~e~----e~~~~i~~~~~~~~~l~~k~sL~e~~~li 249 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGG-PDEE----ERAEEIAKGLPNAVILAGKTSLEELAALI 249 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecC-hHHH----HHHHHHHHhcCCccccCCCCCHHHHHHHH
Confidence 478999999 442 46788999999999988855554443 3110 0111222222222113332 3343 477
Q ss_pred cCCCcceeeeccCchhHHHHHhhCCcEEec
Q 047540 264 NHPAVGGFFTHSGWNSTIESLCAGVPMICW 293 (388)
Q Consensus 264 ~~~~~~~~IthgG~~s~~eal~~GvP~i~~ 293 (388)
.++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 250 ~~a~l--~I~~-DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 250 AGADL--VIGN-DSGPMHLAAALGTPTIAL 276 (334)
T ss_pred hcCCE--EEcc-CChHHHHHHHcCCCEEEE
Confidence 88887 8874 566788889999999985
No 164
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=49.51 E-value=49 Score=30.92 Aligned_cols=77 Identities=13% Similarity=0.222 Sum_probs=57.2
Q ss_pred ccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHH
Q 047540 202 VYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTI 281 (388)
Q Consensus 202 ~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~ 281 (388)
+...++....+.+++.+.....||..++... ..++.++++...+-.+|++ ||-++-..+++
T Consensus 44 a~s~~~Ra~dL~~a~~d~~i~aI~~~rGG~g-----------------a~rlL~~ld~~~~~~~pK~--~iGySDiTaL~ 104 (282)
T cd07025 44 AGTDEERAADLNAAFADPEIKAIWCARGGYG-----------------ANRLLPYLDYDLIRANPKI--FVGYSDITALH 104 (282)
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEcCCcCC-----------------HHHhhhhCCHHHHhhCCeE--EEEecHHHHHH
Confidence 3455678999999999999999999886531 2345556666666677877 98888888888
Q ss_pred HHHhh--CCcEEecCCcc
Q 047540 282 ESLCA--GVPMICWPFLG 297 (388)
Q Consensus 282 eal~~--GvP~i~~P~~~ 297 (388)
-+++. |++.+.=|+..
T Consensus 105 ~~l~~~~g~~t~hGp~~~ 122 (282)
T cd07025 105 LALYAKTGLVTFHGPMLA 122 (282)
T ss_pred HHHHHhcCceEEECcccc
Confidence 87754 88887777643
No 165
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=49.37 E-value=1.4e+02 Score=28.90 Aligned_cols=95 Identities=12% Similarity=0.103 Sum_probs=57.3
Q ss_pred HHHHHhcCC--CCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeec------cCchhHHHH
Q 047540 212 VAMGLVNSN--HPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTH------SGWNSTIES 283 (388)
Q Consensus 212 ~~~al~~~~--~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~Ith------gG~~s~~ea 283 (388)
.+.++...+ ..++.+...+ .+-.++..+..-+..|-+..+++...++.++.+- -+.--+.++
T Consensus 17 h~~al~~~~~~~eLvaV~d~~----------~erA~~~A~~~gi~~y~~~eell~d~Di~~V~ipt~~P~~~H~e~a~~a 86 (343)
T TIGR01761 17 YLAAFAAAPERFELAGILAQG----------SERSRALAHRLGVPLYCEVEELPDDIDIACVVVRSAIVGGQGSALARAL 86 (343)
T ss_pred HHHHHHhCCCCcEEEEEEcCC----------HHHHHHHHHHhCCCccCCHHHHhcCCCEEEEEeCCCCCCccHHHHHHHH
Confidence 455665544 6676666533 1111122222223345666778888888777751 223557889
Q ss_pred HhhCCcEEe-cCCccchhHhHHHHhhhhceeEEe
Q 047540 284 LCAGVPMIC-WPFLGDQATNCRYTCNEWGVGMDI 316 (388)
Q Consensus 284 l~~GvP~i~-~P~~~DQ~~na~~v~~~~G~G~~l 316 (388)
+.+|+.++| -|+..++-.-...++++.|+=+.+
T Consensus 87 L~aGkHVL~EKPla~~Ea~el~~~A~~~g~~l~v 120 (343)
T TIGR01761 87 LARGIHVLQEHPLHPRDIQDLLRLAERQGRRYLV 120 (343)
T ss_pred HhCCCeEEEcCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 999999999 899866666555555665665555
No 166
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=46.32 E-value=31 Score=33.34 Aligned_cols=98 Identities=15% Similarity=0.146 Sum_probs=54.7
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCch-hHHH-hhhcCc-----c----------cc
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPS-EFEV-KAKETG-----F----------IA 254 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~-~~~~-~~~~~~-----~----------v~ 254 (388)
.+++.+.||.+..-+. .++++.|++.++.++|+......+.. .+|. ++.- .++... . +.
T Consensus 3 ~i~~~~GGTGGHi~Pa--la~a~~l~~~g~~v~~vg~~~~~e~~--l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 78 (352)
T PRK12446 3 KIVFTGGGSAGHVTPN--LAIIPYLKEDNWDISYIGSHQGIEKT--IIEKENIPYYSISSGKLRRYFDLKNIKDPFLVMK 78 (352)
T ss_pred eEEEEcCCcHHHHHHH--HHHHHHHHhCCCEEEEEECCCccccc--cCcccCCcEEEEeccCcCCCchHHHHHHHHHHHH
Confidence 4778888886654333 24566777778999999765443211 1111 1100 000000 0 00
Q ss_pred cccChHhhhc--CCCcceeeeccCchh---HHHHHhhCCcEEecCC
Q 047540 255 RWCPQEEVLN--HPAVGGFFTHSGWNS---TIESLCAGVPMICWPF 295 (388)
Q Consensus 255 ~~~pq~~~L~--~~~~~~~IthgG~~s---~~eal~~GvP~i~~P~ 295 (388)
.+.--..++. .|++ +|++||.-| ++.|...|+|+++.=.
T Consensus 79 ~~~~~~~i~~~~kPdv--vi~~Ggy~s~p~~~aa~~~~~p~~i~e~ 122 (352)
T PRK12446 79 GVMDAYVRIRKLKPDV--IFSKGGFVSVPVVIGGWLNRVPVLLHES 122 (352)
T ss_pred HHHHHHHHHHhcCCCE--EEecCchhhHHHHHHHHHcCCCEEEECC
Confidence 1111112444 4666 999999986 8999999999987443
No 167
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=45.39 E-value=25 Score=30.22 Aligned_cols=33 Identities=12% Similarity=0.298 Sum_probs=22.3
Q ss_pred cCCCcceeeeccCchhHHHHHhhCCcEEecCCcc
Q 047540 264 NHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLG 297 (388)
Q Consensus 264 ~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~ 297 (388)
.+..+.++|++||...+..... ++|+|-+|..+
T Consensus 31 ~~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~ 63 (176)
T PF06506_consen 31 ESEGADVIISRGGTAELLRKHV-SIPVVEIPISG 63 (176)
T ss_dssp TTTT-SEEEEEHHHHHHHHCC--SS-EEEE---H
T ss_pred HhcCCeEEEECCHHHHHHHHhC-CCCEEEECCCH
Confidence 4455556999999988888877 99999999854
No 168
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=44.96 E-value=2.2e+02 Score=25.09 Aligned_cols=145 Identities=10% Similarity=0.023 Sum_probs=72.4
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhc-CcccccccChHhhhcCCCcc
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKE-TGFIARWCPQEEVLNHPAVG 269 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~pq~~~L~~~~~~ 269 (388)
+.++.|..|.++ ...++.|.+.+..+.++ ... +.+.+.+.... .+.......+..-+..+++
T Consensus 11 k~vLVIGgG~va-------~~ka~~Ll~~ga~V~VI-s~~--------~~~~l~~l~~~~~i~~~~~~~~~~~l~~adl- 73 (202)
T PRK06718 11 KRVVIVGGGKVA-------GRRAITLLKYGAHIVVI-SPE--------LTENLVKLVEEGKIRWKQKEFEPSDIVDAFL- 73 (202)
T ss_pred CEEEEECCCHHH-------HHHHHHHHHCCCeEEEE-cCC--------CCHHHHHHHhCCCEEEEecCCChhhcCCceE-
Confidence 577888766654 23455555667666544 322 22333222221 2222333333445666776
Q ss_pred eeeeccCchhHHHHHh----hCCcEEecCCccchhH-----hHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 270 GFFTHSGWNSTIESLC----AGVPMICWPFLGDQAT-----NCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 270 ~~IthgG~~s~~eal~----~GvP~i~~P~~~DQ~~-----na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
+|+--+.-.+.+.++ .++++-+ .|.+. .-..+ ++-++-+.+.+.+. ...-+..|++.|.+++..
T Consensus 74 -ViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~-~~g~l~iaIsT~G~-sP~la~~lr~~ie~~~~~ 146 (202)
T PRK06718 74 -VIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSAL-HRGKLTISVSTDGA-SPKLAKKIRDELEALYDE 146 (202)
T ss_pred -EEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEE-EcCCeEEEEECCCC-ChHHHHHHHHHHHHHcch
Confidence 888767665555544 4554433 23322 22233 33345555522111 123345577777766632
Q ss_pred chHHHHHHHHHHHHHHHHHH
Q 047540 341 EKGMQMRNKASEWKRFAEEA 360 (388)
Q Consensus 341 ~~~~~~~~~a~~l~~~~~~~ 360 (388)
+-..+-+.+.++++.+++.
T Consensus 147 -~~~~~~~~~~~~R~~~k~~ 165 (202)
T PRK06718 147 -SYESYIDFLYECRQKIKEL 165 (202)
T ss_pred -hHHHHHHHHHHHHHHHHHh
Confidence 2234677777788877754
No 169
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=44.74 E-value=37 Score=33.53 Aligned_cols=37 Identities=16% Similarity=0.195 Sum_probs=25.5
Q ss_pred HHHHHHHHhhcCCCCccEEEEcCCcch----------HHHHHHHhCCCeEEE
Q 047540 29 PFLDLLQKLKSSSNSVSCIISDGFMPF----------TVTAAQQLGIPIALF 70 (388)
Q Consensus 29 ~~~~ll~~l~~~~~~~D~iI~D~~~~~----------~~~~A~~lgIP~v~~ 70 (388)
.+.++++.+ +||++|+-+.+-+ +..+.++++||.++-
T Consensus 67 ~i~~mv~k~-----~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vta 113 (431)
T TIGR01917 67 KVLEMIKGA-----NPDIFIAGPAFNAGRYGMAAGAITKAVQDELGIKAFTA 113 (431)
T ss_pred HHHHHHHhc-----CCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEE
Confidence 344445554 9999999995532 234567899999875
No 170
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=44.70 E-value=38 Score=33.50 Aligned_cols=43 Identities=14% Similarity=0.095 Sum_probs=26.3
Q ss_pred eeeccCchhHHHHHhhCCcEEecCCcc--chhHhHHHHhhhhceeEE
Q 047540 271 FFTHSGWNSTIESLCAGVPMICWPFLG--DQATNCRYTCNEWGVGMD 315 (388)
Q Consensus 271 ~IthgG~~s~~eal~~GvP~i~~P~~~--DQ~~na~~v~~~~G~G~~ 315 (388)
.-|+||..-+-|-=.+|+|++.+=-.- -.-.-|.|++. ++++-
T Consensus 348 tC~r~~a~m~keiE~~GiPvv~~~~~~pis~tvGanrivp--~~~ip 392 (431)
T TIGR01918 348 TCTRCGATMVKEIERAGIPVVHMCTVIPIALTVGANRIVP--TIAIP 392 (431)
T ss_pred cchhHHHHHHHHHHHcCCCEEEEeecccHhhhcCccceec--ccCcC
Confidence 456677766777778999998765321 23334566644 44443
No 171
>PF05014 Nuc_deoxyrib_tr: Nucleoside 2-deoxyribosyltransferase; InterPro: IPR007710 Nucleoside 2-deoxyribosyltransferase (2.4.2.6 from EC) catalyses the cleavage of the glycosidic bonds of 2-deoxyribonucleosides. Nucleoside 2-deoxyribosyltransferases can be divided into two groups based on their substrate specificity: class I enzymes are specific for the transfer of deoxyribose between two purines, while class II enzymes will transfer the deoxyribose between either purines or pyrimidines. The structure of the class I [] and class II [] enzymes are very similar. In class I enzymes, the purine base shields the active site from solvent, which the smaller pyrimidine base cannot do, while in class II enzymes the active site is shielded by a loop (residues 48-62). Both classes of enzymes are found in various Lactobacillus species and participate in nucleoside recycling in these microorganisms. This entry represents both classes of enzymes.; GO: 0050144 nucleoside deoxyribosyltransferase activity, 0070694 deoxyribonucleoside 5'-monophosphate N-glycosidase activity, 0009159 deoxyribonucleoside monophosphate catabolic process; PDB: 1S2L_A 1S2D_C 1S2I_A 1S3F_B 1S2G_C 2A0K_A 2F67_A 2F64_B 2F62_A 2F2T_A ....
Probab=44.11 E-value=82 Score=24.65 Aligned_cols=94 Identities=11% Similarity=0.025 Sum_probs=48.8
Q ss_pred EEEeeCCCccC-CHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceee
Q 047540 194 VYVNFGSSVYL-TKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFF 272 (388)
Q Consensus 194 v~vs~Gs~~~~-~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~I 272 (388)
||++..- ... ......++.+.|++.+..++.-.... .............+ |--....+..+++-+++
T Consensus 1 IYlAgp~-F~~~~~~~~~~~~~~L~~~g~~v~~P~~~~---~~~~~~~~~~~~~i--------~~~d~~~i~~~D~via~ 68 (113)
T PF05014_consen 1 IYLAGPF-FSEEQKARVERLREALEKNGFEVYSPQDND---ENDEEDSQEWAREI--------FERDLEGIRECDIVIAN 68 (113)
T ss_dssp EEEESGG-SSHHHHHHHHHHHHHHHTTTTEEEGGCTCS---SS--TTSHHCHHHH--------HHHHHHHHHHSSEEEEE
T ss_pred CEEeCCc-CCHHHHHHHHHHHHHHHhCCCEEEeccccc---cccccccchHHHHH--------HHHHHHHHHHCCEEEEE
Confidence 5776433 322 23457778999998888544111100 00000011000000 01123466677775555
Q ss_pred ecc---CchhHHHH---HhhCCcEEecCCccch
Q 047540 273 THS---GWNSTIES---LCAGVPMICWPFLGDQ 299 (388)
Q Consensus 273 thg---G~~s~~ea---l~~GvP~i~~P~~~DQ 299 (388)
..+ +.||..|. ...|+|++++-....+
T Consensus 69 l~~~~~d~Gt~~ElG~A~algkpv~~~~~d~~~ 101 (113)
T PF05014_consen 69 LDGFRPDSGTAFELGYAYALGKPVILLTEDDRP 101 (113)
T ss_dssp ECSSS--HHHHHHHHHHHHTTSEEEEEECCCCT
T ss_pred CCCCCCCCcHHHHHHHHHHCCCEEEEEEcCCcc
Confidence 555 78999885 7789999987654433
No 172
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=43.20 E-value=35 Score=33.28 Aligned_cols=88 Identities=15% Similarity=0.177 Sum_probs=55.8
Q ss_pred cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCC-CCCc-----hhHHHhhhcC--cccccccChHh---hhcCCCccee
Q 047540 203 YLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGET-ADMP-----SEFEVKAKET--GFIARWCPQEE---VLNHPAVGGF 271 (388)
Q Consensus 203 ~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~-~~~~-----~~~~~~~~~~--~~v~~~~pq~~---~L~~~~~~~~ 271 (388)
......+..+++++...+.++...+......... ..+. .+-. ...++ +.+.+|+||.+ +|-.+++ .|
T Consensus 191 ~Ye~~~l~~ll~~~~~~~~pv~llvp~g~~~~~~~~~~~~~~~~~g~~-~~~g~l~l~~lPF~~Q~~yD~LLw~cD~-Nf 268 (374)
T PF10093_consen 191 CYENAALASLLDAWAASPKPVHLLVPEGRALNSLAAWLGDALLQAGDS-WQRGNLTLHVLPFVPQDDYDRLLWACDF-NF 268 (374)
T ss_pred eCCchHHHHHHHHHhcCCCCeEEEecCCccHHHHHHHhccccccCccc-cccCCeEEEECCCCCHHHHHHHHHhCcc-ce
Confidence 3455668889999998888887766544322110 0000 0000 01233 34589999975 8988887 33
Q ss_pred eeccCchhHHHHHhhCCcEEecC
Q 047540 272 FTHSGWNSTIESLCAGVPMICWP 294 (388)
Q Consensus 272 IthgG~~s~~eal~~GvP~i~~P 294 (388)
| + |-=|...|..+|+|+|=-.
T Consensus 269 V-R-GEDSfVRAqwAgkPFvWhI 289 (374)
T PF10093_consen 269 V-R-GEDSFVRAQWAGKPFVWHI 289 (374)
T ss_pred E-e-cchHHHHHHHhCCCceEec
Confidence 3 3 7789999999999997533
No 173
>PLN02929 NADH kinase
Probab=43.14 E-value=45 Score=31.56 Aligned_cols=66 Identities=8% Similarity=0.111 Sum_probs=44.0
Q ss_pred CCCcceeeeccCchhHHHHHh---hCCcEEecCCcc------chhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHH
Q 047540 265 HPAVGGFFTHSGWNSTIESLC---AGVPMICWPFLG------DQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVR 335 (388)
Q Consensus 265 ~~~~~~~IthgG~~s~~eal~---~GvP~i~~P~~~------DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~ 335 (388)
.+++ +|+-||-||++.+.. .++|++++-... .++.|.-. +..-.|..- .++.+++.++|.
T Consensus 64 ~~Dl--vi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~--~~r~lGfL~-------~~~~~~~~~~L~ 132 (301)
T PLN02929 64 DVDL--VVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFD--ARRSTGHLC-------AATAEDFEQVLD 132 (301)
T ss_pred CCCE--EEEECCcHHHHHHHHHcCCCCcEEEEECCCcccccccccccccc--cccCccccc-------cCCHHHHHHHHH
Confidence 3455 999999999998854 468998876642 12333321 111244444 367889999999
Q ss_pred HHHcCc
Q 047540 336 ELMEGE 341 (388)
Q Consensus 336 ~vl~~~ 341 (388)
+++++.
T Consensus 133 ~il~g~ 138 (301)
T PLN02929 133 DVLFGR 138 (301)
T ss_pred HHHcCC
Confidence 999765
No 174
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=42.90 E-value=48 Score=30.60 Aligned_cols=40 Identities=15% Similarity=0.092 Sum_probs=28.7
Q ss_pred HHHHHHHHHhhcCCCCccEEEEcCCc------chHHHHHHHhCCCeEEEcc
Q 047540 28 QPFLDLLQKLKSSSNSVSCIISDGFM------PFTVTAAQQLGIPIALFFT 72 (388)
Q Consensus 28 ~~~~~ll~~l~~~~~~~D~iI~D~~~------~~~~~~A~~lgIP~v~~~~ 72 (388)
..+...++.+ .||+|++-... .-+..+|+.||+|++.+..
T Consensus 102 ~~La~ai~~~-----~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~ 147 (256)
T PRK03359 102 SALAAAAQKA-----GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVS 147 (256)
T ss_pred HHHHHHHHHh-----CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEE
Confidence 3344555554 79999986533 2578899999999998743
No 175
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=42.68 E-value=65 Score=30.53 Aligned_cols=77 Identities=10% Similarity=0.056 Sum_probs=56.0
Q ss_pred ccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHH
Q 047540 202 VYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTI 281 (388)
Q Consensus 202 ~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~ 281 (388)
+...++....+.+++.+.....||...+... ..++.++++...+-.||++ ||-.+-..+++
T Consensus 48 ag~~~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~lD~~~i~~~PK~--fiGySDiTaL~ 108 (308)
T cd07062 48 SASPEERAEELMAAFADPSIKAIIPTIGGDD-----------------SNELLPYLDYELIKKNPKI--FIGYSDITALH 108 (308)
T ss_pred cCCHHHHHHHHHHHhcCCCCCEEEECCcccC-----------------HhhhhhhcCHHHHhhCCCE--EEeccHHHHHH
Confidence 3445678899999999999999999876531 2345666666666677876 88888888888
Q ss_pred HHHh--hCCcEEecCCcc
Q 047540 282 ESLC--AGVPMICWPFLG 297 (388)
Q Consensus 282 eal~--~GvP~i~~P~~~ 297 (388)
-+++ +|++.+.=|+..
T Consensus 109 ~al~~~~g~~t~hGp~~~ 126 (308)
T cd07062 109 LAIYKKTGLVTYYGPNLL 126 (308)
T ss_pred HHHHHhcCCeEEECcccc
Confidence 7774 477777777643
No 176
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=40.94 E-value=73 Score=30.02 Aligned_cols=54 Identities=13% Similarity=0.265 Sum_probs=36.4
Q ss_pred CCCcceeeeccCchhHHHHHhh----CCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 265 HPAVGGFFTHSGWNSTIESLCA----GVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 265 ~~~~~~~IthgG~~s~~eal~~----GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
.+++ +|+-||-||+++++.. ++|++++-. -. +|... .++.+++.++|.+++++
T Consensus 63 ~~d~--vi~~GGDGt~l~~~~~~~~~~~pilGIn~------------G~--lGFL~-------~~~~~~~~~~l~~~~~g 119 (291)
T PRK02155 63 RADL--AVVLGGDGTMLGIGRQLAPYGVPLIGINH------------GR--LGFIT-------DIPLDDMQETLPPMLAG 119 (291)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEcC------------CC--ccccc-------cCCHHHHHHHHHHHHcC
Confidence 4566 9999999999999763 678777652 11 23222 35667777777777765
Q ss_pred c
Q 047540 341 E 341 (388)
Q Consensus 341 ~ 341 (388)
+
T Consensus 120 ~ 120 (291)
T PRK02155 120 N 120 (291)
T ss_pred C
Confidence 4
No 177
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=40.35 E-value=78 Score=27.15 Aligned_cols=105 Identities=16% Similarity=0.181 Sum_probs=62.7
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcce
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGG 270 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~ 270 (388)
+.+-.+.+|.++ +.+++-++..|.+|+..-... .... .. ......+.+-.++++.+++
T Consensus 37 ~tvgIiG~G~IG-------~~vA~~l~~fG~~V~~~d~~~----------~~~~-~~--~~~~~~~~~l~ell~~aDi-- 94 (178)
T PF02826_consen 37 KTVGIIGYGRIG-------RAVARRLKAFGMRVIGYDRSP----------KPEE-GA--DEFGVEYVSLDELLAQADI-- 94 (178)
T ss_dssp SEEEEESTSHHH-------HHHHHHHHHTT-EEEEEESSC----------HHHH-HH--HHTTEEESSHHHHHHH-SE--
T ss_pred CEEEEEEEcCCc-------CeEeeeeecCCceeEEecccC----------Chhh-hc--ccccceeeehhhhcchhhh--
Confidence 467777777765 456666667788877665432 1110 00 1112355677789999998
Q ss_pred eeeccCchhHHHHHhhCCcEEecCCcc--chhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHH
Q 047540 271 FFTHSGWNSTIESLCAGVPMICWPFLG--DQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRE 336 (388)
Q Consensus 271 ~IthgG~~s~~eal~~GvP~i~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ 336 (388)
++.|+ |... .+..|+..+ +.++-|..+-+..+..-++.+++.+++++
T Consensus 95 v~~~~------------------plt~~T~~li~~~~l-~~mk~ga~lvN~aRG~~vde~aL~~aL~~ 143 (178)
T PF02826_consen 95 VSLHL------------------PLTPETRGLINAEFL-AKMKPGAVLVNVARGELVDEDALLDALES 143 (178)
T ss_dssp EEE-S------------------SSSTTTTTSBSHHHH-HTSTTTEEEEESSSGGGB-HHHHHHHHHT
T ss_pred hhhhh------------------ccccccceeeeeeee-eccccceEEEeccchhhhhhhHHHHHHhh
Confidence 77775 4433 566788888 66776655445555567888888887754
No 178
>PRK12342 hypothetical protein; Provisional
Probab=40.33 E-value=57 Score=30.06 Aligned_cols=38 Identities=8% Similarity=0.115 Sum_probs=27.7
Q ss_pred HHHHHHHHhhcCCCCccEEEEcCCcc------hHHHHHHHhCCCeEEEc
Q 047540 29 PFLDLLQKLKSSSNSVSCIISDGFMP------FTVTAAQQLGIPIALFF 71 (388)
Q Consensus 29 ~~~~ll~~l~~~~~~~D~iI~D~~~~------~~~~~A~~lgIP~v~~~ 71 (388)
.+...++.+ .||+|++-.... -+..+|+.||+|++.+.
T Consensus 100 ~La~~i~~~-----~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v 143 (254)
T PRK12342 100 ALAAAIEKI-----GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAV 143 (254)
T ss_pred HHHHHHHHh-----CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeE
Confidence 344555554 699999865332 38899999999999874
No 179
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=39.91 E-value=56 Score=27.82 Aligned_cols=35 Identities=20% Similarity=0.137 Sum_probs=26.6
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEE
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWI 226 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~ 226 (388)
-.+|+++||........++..+++|.+.+..-++.
T Consensus 2 ~~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~ 36 (160)
T COG0801 2 TRVYLGLGSNLGDRLKQLRAALAALDALADIRVVA 36 (160)
T ss_pred cEEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEE
Confidence 36999999987766777888888888877533433
No 180
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=39.53 E-value=38 Score=29.09 Aligned_cols=44 Identities=20% Similarity=0.305 Sum_probs=32.0
Q ss_pred ccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCc
Q 047540 26 MLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIA 74 (388)
Q Consensus 26 ~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~ 74 (388)
....++..+.++.+. ++|+||-+. ....+|+++|+|++.+.++.
T Consensus 110 ~~~e~~~~i~~~~~~--G~~viVGg~---~~~~~A~~~gl~~v~i~sg~ 153 (176)
T PF06506_consen 110 SEEEIEAAIKQAKAE--GVDVIVGGG---VVCRLARKLGLPGVLIESGE 153 (176)
T ss_dssp SHHHHHHHHHHHHHT--T--EEEESH---HHHHHHHHTTSEEEESS--H
T ss_pred CHHHHHHHHHHHHHc--CCcEEECCH---HHHHHHHHcCCcEEEEEecH
Confidence 345677888888777 899999986 35788999999999886644
No 181
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=39.50 E-value=1.4e+02 Score=25.34 Aligned_cols=27 Identities=19% Similarity=0.252 Sum_probs=22.0
Q ss_pred cceeeeccCc------hhHHHHHhhCCcEEecC
Q 047540 268 VGGFFTHSGW------NSTIESLCAGVPMICWP 294 (388)
Q Consensus 268 ~~~~IthgG~------~s~~eal~~GvP~i~~P 294 (388)
.+++++|+|- +.+.+|...++|+|++.
T Consensus 64 ~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 64 LGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 4448888884 46789999999999996
No 182
>PLN02470 acetolactate synthase
Probab=39.41 E-value=74 Score=33.13 Aligned_cols=90 Identities=14% Similarity=0.070 Sum_probs=51.0
Q ss_pred eeCCCccCCH--HHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhh--hcCcccccc-cChHh-------hhc
Q 047540 197 NFGSSVYLTK--QQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKA--KETGFIARW-CPQEE-------VLN 264 (388)
Q Consensus 197 s~Gs~~~~~~--~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~-~pq~~-------~L~ 264 (388)
+|||....+. .....+++.|++.|.+.++-+.+... ..+...+ ++++..+.- -.+.. -..
T Consensus 2 ~~~~~~~~~~~~~~a~~l~~~L~~~GV~~vFg~pG~~~--------~~l~dal~~~~~i~~i~~rhE~~A~~~Adgyar~ 73 (585)
T PLN02470 2 TFQSRFAPDEPRKGADILVEALEREGVDTVFAYPGGAS--------MEIHQALTRSNCIRNVLCRHEQGEVFAAEGYAKA 73 (585)
T ss_pred CcccCCCCCccccHHHHHHHHHHHcCCCEEEEcCCccc--------HHHHHHHhccCCceEEEeccHHHHHHHHHHHHHH
Confidence 3666554332 33566888888888888888765532 1121111 112221110 01111 112
Q ss_pred CCCcceeeeccCc------hhHHHHHhhCCcEEecC
Q 047540 265 HPAVGGFFTHSGW------NSTIESLCAGVPMICWP 294 (388)
Q Consensus 265 ~~~~~~~IthgG~------~s~~eal~~GvP~i~~P 294 (388)
..+++++++|.|- +.+.+|...++|||++.
T Consensus 74 tg~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 74 SGKVGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred hCCCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 2356669999884 46789999999999985
No 183
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=38.57 E-value=1e+02 Score=26.56 Aligned_cols=43 Identities=14% Similarity=0.102 Sum_probs=35.3
Q ss_pred HHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHh-CCCeEEE
Q 047540 28 QPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQL-GIPIALF 70 (388)
Q Consensus 28 ~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~l-gIP~v~~ 70 (388)
..+...+.+|+++|-.||+||.-+-.-.+.-+-+.+ ++|.+.+
T Consensus 51 ~av~~a~~~L~~~Gf~PDvI~~H~GWGe~Lflkdv~P~a~li~Y 94 (171)
T PF12000_consen 51 QAVARAARQLRAQGFVPDVIIAHPGWGETLFLKDVFPDAPLIGY 94 (171)
T ss_pred HHHHHHHHHHHHcCCCCCEEEEcCCcchhhhHHHhCCCCcEEEE
Confidence 556677778888888999999998777777788888 9998886
No 184
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=37.38 E-value=1e+02 Score=29.06 Aligned_cols=55 Identities=16% Similarity=0.163 Sum_probs=38.7
Q ss_pred cCCCcceeeeccCchhHHHHHh----hCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHc
Q 047540 264 NHPAVGGFFTHSGWNSTIESLC----AGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELME 339 (388)
Q Consensus 264 ~~~~~~~~IthgG~~s~~eal~----~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~ 339 (388)
..+++ +|+=||-||++.++. .++|++++-.. + +|..- .++.+++.+++.++++
T Consensus 67 ~~~D~--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G------------~--lGFL~-------~~~~~~~~~~l~~i~~ 123 (296)
T PRK04539 67 QYCDL--VAVLGGDGTFLSVAREIAPRAVPIIGINQG------------H--LGFLT-------QIPREYMTDKLLPVLE 123 (296)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhcccCCCEEEEecC------------C--CeEee-------ccCHHHHHHHHHHHHc
Confidence 34566 999999999998865 37888877531 1 33343 3667788888888886
Q ss_pred Cc
Q 047540 340 GE 341 (388)
Q Consensus 340 ~~ 341 (388)
++
T Consensus 124 g~ 125 (296)
T PRK04539 124 GK 125 (296)
T ss_pred CC
Confidence 54
No 185
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=36.89 E-value=3.1e+02 Score=24.55 Aligned_cols=81 Identities=19% Similarity=0.301 Sum_probs=51.3
Q ss_pred cCcccccccCh---HhhhcCCCcceeeec---cCch-hHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCC
Q 047540 249 ETGFIARWCPQ---EEVLNHPAVGGFFTH---SGWN-STIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGD 321 (388)
Q Consensus 249 ~~~~v~~~~pq---~~~L~~~~~~~~Ith---gG~~-s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 321 (388)
.++...+++++ ..++..+++ ++.. .|.+ ++.|++++|+|+|.-... .....+ ...+.|..+
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~----~~~e~~-~~~~~g~~~----- 324 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDVG----GIPEVV-EDGETGLLV----- 324 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCCC----ChHHHh-cCCCceEec-----
Confidence 45666788872 236776766 5554 3554 369999999999776543 222222 322246633
Q ss_pred CCCCCHHHHHHHHHHHHcCch
Q 047540 322 DNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 322 ~~~~~~~~l~~ai~~vl~~~~ 342 (388)
.....+++..++..++++.+
T Consensus 325 -~~~~~~~~~~~i~~~~~~~~ 344 (381)
T COG0438 325 -PPGDVEELADALEQLLEDPE 344 (381)
T ss_pred -CCCCHHHHHHHHHHHhcCHH
Confidence 22268899999999988763
No 186
>COG1422 Predicted membrane protein [Function unknown]
Probab=36.42 E-value=82 Score=27.78 Aligned_cols=72 Identities=11% Similarity=0.162 Sum_probs=45.0
Q ss_pred hHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCchH-HHHHHHHHHHHHHH
Q 047540 279 STIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEKG-MQMRNKASEWKRFA 357 (388)
Q Consensus 279 s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~-~~~~~~a~~l~~~~ 357 (388)
|+.++++-++-.+..|+..=++..-..++- ++ .+ .-+...+++.+.|-+. +++++.++++++.+
T Consensus 24 ~~~~~i~~~ln~~f~P~i~~~~p~lvilV~--av--i~-----------gl~~~i~~~~liD~ekm~~~qk~m~efq~e~ 88 (201)
T COG1422 24 SIRDGIGGALNVVFGPLLSPLPPHLVILVA--AV--IT-----------GLYITILQKLLIDQEKMKELQKMMKEFQKEF 88 (201)
T ss_pred HHHHHHHHHHHHHHhhhccccccHHHHHHH--HH--HH-----------HHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 566777776666777765444433322211 11 11 1334466677777655 68999999999999
Q ss_pred HHHhCCCC
Q 047540 358 EEAAAPDG 365 (388)
Q Consensus 358 ~~~~~~gg 365 (388)
++|-++|.
T Consensus 89 ~eA~~~~d 96 (201)
T COG1422 89 REAQESGD 96 (201)
T ss_pred HHHHHhCC
Confidence 99855554
No 187
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=36.28 E-value=57 Score=27.90 Aligned_cols=39 Identities=18% Similarity=0.140 Sum_probs=25.7
Q ss_pred cHHHHHHHHHhhcCCCCccEEEEcCCcch--HHHHHHHhCCCeEEEc
Q 047540 27 LQPFLDLLQKLKSSSNSVSCIISDGFMPF--TVTAAQQLGIPIALFF 71 (388)
Q Consensus 27 ~~~~~~ll~~l~~~~~~~D~iI~D~~~~~--~~~~A~~lgIP~v~~~ 71 (388)
.+.++.++.- +||+||....... ....-+..|||++.+.
T Consensus 59 ~~n~E~ll~l------~PDlii~~~~~~~~~~~~~l~~~gIpvv~i~ 99 (186)
T cd01141 59 SLNVELIVAL------KPDLVILYGGFQAQTILDKLEQLGIPVLYVN 99 (186)
T ss_pred CCCHHHHhcc------CCCEEEEecCCCchhHHHHHHHcCCCEEEeC
Confidence 3455555554 9999998654322 3334477899998874
No 188
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=36.22 E-value=84 Score=29.56 Aligned_cols=55 Identities=15% Similarity=0.195 Sum_probs=36.3
Q ss_pred cCCCcceeeeccCchhHHHHHh----hCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHc
Q 047540 264 NHPAVGGFFTHSGWNSTIESLC----AGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELME 339 (388)
Q Consensus 264 ~~~~~~~~IthgG~~s~~eal~----~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~ 339 (388)
..+++ +|+-||-||++.++. .++|++++-. -. +|.. ..++.+++.+++.++++
T Consensus 63 ~~~Dl--vi~iGGDGT~L~aa~~~~~~~~PilGIN~------------G~--lGFL-------t~~~~~~~~~~l~~i~~ 119 (287)
T PRK14077 63 KISDF--LISLGGDGTLISLCRKAAEYDKFVLGIHA------------GH--LGFL-------TDITVDEAEKFFQAFFQ 119 (287)
T ss_pred cCCCE--EEEECCCHHHHHHHHHhcCCCCcEEEEeC------------CC--cccC-------CcCCHHHHHHHHHHHHc
Confidence 34566 999999999988765 3678777652 11 2222 23566777777777776
Q ss_pred Cc
Q 047540 340 GE 341 (388)
Q Consensus 340 ~~ 341 (388)
++
T Consensus 120 g~ 121 (287)
T PRK14077 120 GE 121 (287)
T ss_pred CC
Confidence 54
No 189
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.90 E-value=1.7e+02 Score=24.95 Aligned_cols=95 Identities=18% Similarity=0.257 Sum_probs=62.9
Q ss_pred cChHhhh-cCCCcceeeeccC---chhHHHHHhhCCcEEecCCc--cchhHhHHHHhhhhceeEEeeecCCC-CCCCHHH
Q 047540 257 CPQEEVL-NHPAVGGFFTHSG---WNSTIESLCAGVPMICWPFL--GDQATNCRYTCNEWGVGMDITNSGDD-NQVGRNE 329 (388)
Q Consensus 257 ~pq~~~L-~~~~~~~~IthgG---~~s~~eal~~GvP~i~~P~~--~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~ 329 (388)
-+|..++ .||++..-+--.| .-|+.|-..+|.=-+. |.- -=+..|+++. ++.|.=..+ - +..+.++
T Consensus 63 ~~rl~liraHPdLAgk~a~a~elta~S~~EQasAGLd~Ls-~~E~a~f~~LN~aY~-~rFgfPfI~-----aVkg~~k~~ 135 (176)
T COG3195 63 EERLALIRAHPDLAGKAAIAGELTAESTSEQASAGLDRLS-PEEFARFTELNAAYV-ERFGFPFII-----AVKGNTKDT 135 (176)
T ss_pred HHHHHHHHhChhhHHHHHHHHHhhhhhHHHHHhcCcccCC-HHHHHHHHHHHHHHH-HhcCCceEE-----eecCCCHHH
Confidence 3566644 5887732222222 3567787887765432 111 1245699998 889998877 4 6778899
Q ss_pred HHHHHHHHHcCchHHHHHHHHHHHHHHHH
Q 047540 330 VEKLVRELMEGEKGMQMRNKASEWKRFAE 358 (388)
Q Consensus 330 l~~ai~~vl~~~~~~~~~~~a~~l~~~~~ 358 (388)
|..+..+-|.|.+..+++....++.+..+
T Consensus 136 Il~a~~~Rl~n~~e~E~~tAl~eI~rIA~ 164 (176)
T COG3195 136 ILAAFERRLDNDREQEFATALAEIERIAL 164 (176)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 99999888888776677777777776655
No 190
>COG1698 Uncharacterized protein conserved in archaea [Function unknown]
Probab=35.71 E-value=1.9e+02 Score=21.99 Aligned_cols=46 Identities=17% Similarity=0.142 Sum_probs=25.0
Q ss_pred HHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHh-CCCCChHHHHHHHHHH
Q 047540 329 EVEKLVRELMEGEKGMQMRNKASEWKRFAEEAA-APDGSSATNLEKLEQP 377 (388)
Q Consensus 329 ~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~-~~gg~s~~~~~~~v~~ 377 (388)
+....++++++|.. .-+|.++.++...+++ ++|-+..-....-+..
T Consensus 17 q~~~lL~~Ii~Dtt---VPRNIRraA~~a~e~L~~e~e~p~vRaAtaIsi 63 (93)
T COG1698 17 QVMQLLDEIIQDTT---VPRNIRRAAEEAKEALNNEGESPAVRAATAISI 63 (93)
T ss_pred HHHHHHHHHHcccc---ccHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Confidence 34445667778876 5566666665555555 4455543333333333
No 191
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=35.47 E-value=52 Score=33.37 Aligned_cols=54 Identities=19% Similarity=0.195 Sum_probs=37.3
Q ss_pred hHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCC-CCCHHHHHHHHHHHHcCch
Q 047540 279 STIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDN-QVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 279 s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~-~~~~~~l~~ai~~vl~~~~ 342 (388)
++.||+++|+|+|+.=-. .=+.-+ +..-.|..+ +. .-....+.+++.+...|++
T Consensus 381 v~IEAMa~glPvvAt~~G----GP~EiV-~~~~tG~l~-----dp~~e~~~~~a~~~~kl~~~p~ 435 (495)
T KOG0853|consen 381 VPIEAMACGLPVVATNNG----GPAEIV-VHGVTGLLI-----DPGQEAVAELADALLKLRRDPE 435 (495)
T ss_pred eeHHHHhcCCCEEEecCC----CceEEE-EcCCcceee-----CCchHHHHHHHHHHHHHhcCHH
Confidence 789999999999876432 223333 444567777 53 2222369999999999987
No 192
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=34.81 E-value=1.2e+02 Score=24.90 Aligned_cols=38 Identities=21% Similarity=0.247 Sum_probs=30.0
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEc
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIR 228 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~ 228 (388)
...+|++++||......+.++++++.+. .+.+++++..
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~ 87 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNP 87 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEEC
Confidence 3589999999988777888999999884 3577777654
No 193
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=34.32 E-value=1e+02 Score=29.28 Aligned_cols=54 Identities=11% Similarity=0.246 Sum_probs=38.4
Q ss_pred CCCcceeeeccCchhHHHHHhh----CCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 265 HPAVGGFFTHSGWNSTIESLCA----GVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 265 ~~~~~~~IthgG~~s~~eal~~----GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
.+++ +|+=||-||++.++.. ++|++++.. -+ +|..- .+..+++.+++.+++++
T Consensus 72 ~~D~--vi~lGGDGT~L~aar~~~~~~~PilGIN~------------G~--lGFL~-------~~~~~~~~~~l~~i~~g 128 (306)
T PRK03372 72 GCEL--VLVLGGDGTILRAAELARAADVPVLGVNL------------GH--VGFLA-------EAEAEDLDEAVERVVDR 128 (306)
T ss_pred CCCE--EEEEcCCHHHHHHHHHhccCCCcEEEEec------------CC--Cceec-------cCCHHHHHHHHHHHHcC
Confidence 4555 9999999999988664 788888764 11 23333 35667888888888875
Q ss_pred c
Q 047540 341 E 341 (388)
Q Consensus 341 ~ 341 (388)
.
T Consensus 129 ~ 129 (306)
T PRK03372 129 D 129 (306)
T ss_pred C
Confidence 4
No 194
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=34.08 E-value=5.2e+02 Score=26.33 Aligned_cols=108 Identities=15% Similarity=0.088 Sum_probs=69.8
Q ss_pred cccccChHh---hhcCCCcceeee--ccCchhH-HHHHhhCC----cEEecCCccchhHhHHHHhhhhceeEEeeecCCC
Q 047540 253 IARWCPQEE---VLNHPAVGGFFT--HSGWNST-IESLCAGV----PMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD 322 (388)
Q Consensus 253 v~~~~pq~~---~L~~~~~~~~It--hgG~~s~-~eal~~Gv----P~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 322 (388)
+.+.+|+.+ +++.+++ ++|| .-|+|-+ .|.++++. |+|.--+.+ |. +++.-++.+ +
T Consensus 366 ~~~~v~~~el~alYr~ADV-~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaG-----aa---~~l~~AllV-----N 431 (487)
T TIGR02398 366 FTRSLPYEEVSAWFAMADV-MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAG-----AA---VELKGALLT-----N 431 (487)
T ss_pred EcCCCCHHHHHHHHHhCCE-EEECccccccCcchhhHHhhhcCCCCCEEEecccc-----ch---hhcCCCEEE-----C
Confidence 456667655 6677887 2333 3488864 69999987 555444332 22 234557788 4
Q ss_pred CCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHh
Q 047540 323 NQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPVIKL 381 (388)
Q Consensus 323 ~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~~~ 381 (388)
-.+.++++++|.+.|+.+. ++-+++.+++.+.++ ...+..=.+.|+..|...
T Consensus 432 -P~d~~~~A~ai~~AL~m~~-~Er~~R~~~l~~~v~-----~~d~~~W~~~fl~~l~~~ 483 (487)
T TIGR02398 432 -PYDPVRMDETIYVALAMPK-AEQQARMREMFDAVN-----YYDVQRWADEFLAAVSPQ 483 (487)
T ss_pred -CCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHhhhc
Confidence 3688999999999998874 234666777777666 245555567777776543
No 195
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=34.03 E-value=1.2e+02 Score=27.90 Aligned_cols=46 Identities=13% Similarity=0.166 Sum_probs=36.2
Q ss_pred cHHHHHHHHHhhcCCCCccEEEEcCCcc--hHHHHHHHhCCCeEEEccCc
Q 047540 27 LQPFLDLLQKLKSSSNSVSCIISDGFMP--FTVTAAQQLGIPIALFFTIA 74 (388)
Q Consensus 27 ~~~~~~ll~~l~~~~~~~D~iI~D~~~~--~~~~~A~~lgIP~v~~~~~~ 74 (388)
.+.+.++++.+++. ++.||++++... .+..+|+..|+|++.+.+..
T Consensus 203 ~~~l~~l~~~ik~~--~v~~if~e~~~~~~~~~~la~~~g~~v~~ld~~~ 250 (266)
T cd01018 203 PADLKRLIDLAKEK--GVRVVFVQPQFSTKSAEAIAREIGAKVVTIDPLA 250 (266)
T ss_pred HHHHHHHHHHHHHc--CCCEEEEcCCCCcHHHHHHHHHcCCeEEEeCCcH
Confidence 45677888888776 899999998654 46688999999998876554
No 196
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=33.86 E-value=71 Score=33.26 Aligned_cols=38 Identities=13% Similarity=0.053 Sum_probs=26.8
Q ss_pred cEEEEcCC---cchHHHHHHHhCCCeEEEccCchhHHHHhh
Q 047540 45 SCIISDGF---MPFTVTAAQQLGIPIALFFTIAARSFKGCM 82 (388)
Q Consensus 45 D~iI~D~~---~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~ 82 (388)
.-||+-.+ +..+....++..+++.+++|..++.+..+.
T Consensus 143 ~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l 183 (633)
T PF05693_consen 143 PKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYL 183 (633)
T ss_dssp EEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHH
T ss_pred CcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHh
Confidence 45555543 345788899999999999999988877654
No 197
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=33.67 E-value=7.1e+02 Score=27.75 Aligned_cols=100 Identities=9% Similarity=0.086 Sum_probs=59.6
Q ss_pred hhhcCCCcceeee---ccCchh-HHHHHhhCC---cEEecCCccchhHhHHHHhhhhc-eeEEeeecCCCCCCCHHHHHH
Q 047540 261 EVLNHPAVGGFFT---HSGWNS-TIESLCAGV---PMICWPFLGDQATNCRYTCNEWG-VGMDITNSGDDNQVGRNEVEK 332 (388)
Q Consensus 261 ~~L~~~~~~~~It---hgG~~s-~~eal~~Gv---P~i~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~~~~~~l~~ 332 (388)
.++..+++ |+- +-|+|- ..|+++++. -+++++-+ .-+. +.+| -|+.+ + -.+.+++++
T Consensus 455 AlY~~ADV--~lvTslrDGmNLva~Eyva~~~~~~GvLILSEf----aGaa---~~L~~~AllV-----N-P~D~~~vA~ 519 (934)
T PLN03064 455 ALYAVTDV--ALVTSLRDGMNLVSYEFVACQDSKKGVLILSEF----AGAA---QSLGAGAILV-----N-PWNITEVAA 519 (934)
T ss_pred HHHHhCCE--EEeCccccccCchHHHHHHhhcCCCCCeEEeCC----CchH---HHhCCceEEE-----C-CCCHHHHHH
Confidence 36677887 443 348875 569999955 12222322 1122 2244 56777 4 378899999
Q ss_pred HHHHHHc-CchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHhh
Q 047540 333 LVRELME-GEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPVIKLI 382 (388)
Q Consensus 333 ai~~vl~-~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~~~~ 382 (388)
+|.+.|+ +++ +.+++.+++.+.++ .-++..=.+.|++.|....
T Consensus 520 AI~~AL~M~~~--Er~~r~~~~~~~V~-----~~d~~~Wa~~fl~~L~~~~ 563 (934)
T PLN03064 520 SIAQALNMPEE--EREKRHRHNFMHVT-----THTAQEWAETFVSELNDTV 563 (934)
T ss_pred HHHHHHhCCHH--HHHHHHHHHHhhcc-----cCCHHHHHHHHHHHHHHHH
Confidence 9999987 432 24555555555555 3455555666777776653
No 198
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=33.35 E-value=1e+02 Score=29.07 Aligned_cols=55 Identities=16% Similarity=0.345 Sum_probs=38.4
Q ss_pred cCCCcceeeeccCchhHHHHHhh----CCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHc
Q 047540 264 NHPAVGGFFTHSGWNSTIESLCA----GVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELME 339 (388)
Q Consensus 264 ~~~~~~~~IthgG~~s~~eal~~----GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~ 339 (388)
..+++ +|+=||-||++.++.. ++|++++-.. + +|.. ..++.+++.+++.++++
T Consensus 63 ~~~dl--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G------------~--lGFL-------t~~~~~~~~~~l~~i~~ 119 (292)
T PRK01911 63 GSADM--VISIGGDGTFLRTATYVGNSNIPILGINTG------------R--LGFL-------ATVSKEEIEETIDELLN 119 (292)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEecC------------C--CCcc-------cccCHHHHHHHHHHHHc
Confidence 34565 9999999999988773 6788776531 1 2322 24667788888888887
Q ss_pred Cc
Q 047540 340 GE 341 (388)
Q Consensus 340 ~~ 341 (388)
+.
T Consensus 120 g~ 121 (292)
T PRK01911 120 GD 121 (292)
T ss_pred CC
Confidence 65
No 199
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=33.32 E-value=3.4e+02 Score=23.94 Aligned_cols=148 Identities=16% Similarity=0.141 Sum_probs=73.1
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhh-cCcccccccChHhhhcCCCcc
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAK-ETGFIARWCPQEEVLNHPAVG 269 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~pq~~~L~~~~~~ 269 (388)
+.+++|..|..+ ..-++.|.+.|..+.++.. . ..+.+.+-.. .++....--.+...+..+.+
T Consensus 10 k~vlVvGgG~va-------~rk~~~Ll~~ga~VtVvsp-~--------~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~l- 72 (205)
T TIGR01470 10 RAVLVVGGGDVA-------LRKARLLLKAGAQLRVIAE-E--------LESELTLLAEQGGITWLARCFDADILEGAFL- 72 (205)
T ss_pred CeEEEECcCHHH-------HHHHHHHHHCCCEEEEEcC-C--------CCHHHHHHHHcCCEEEEeCCCCHHHhCCcEE-
Confidence 567777666544 2334555567777664432 2 1122221111 13332111112345666666
Q ss_pred eeeeccCchhHH-----HHHhhCCcEE--ecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCch
Q 047540 270 GFFTHSGWNSTI-----ESLCAGVPMI--CWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 270 ~~IthgG~~s~~-----eal~~GvP~i--~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~ 342 (388)
+|..-|...+. +|-..|+|+- --|-..| +..-..+ +.-++-+.+.+.+. ...-+..+++.|.+++...-
T Consensus 73 -Vi~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~-f~~pa~~-~~g~l~iaisT~G~-sP~la~~lr~~ie~~l~~~~ 148 (205)
T TIGR01470 73 -VIAATDDEELNRRVAHAARARGVPVNVVDDPELCS-FIFPSIV-DRSPVVVAISSGGA-APVLARLLRERIETLLPPSL 148 (205)
T ss_pred -EEECCCCHHHHHHHHHHHHHcCCEEEECCCcccCe-EEEeeEE-EcCCEEEEEECCCC-CcHHHHHHHHHHHHhcchhH
Confidence 77777765443 3445688873 3333333 2222333 33335455522111 22444667778877775331
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 047540 343 GMQMRNKASEWKRFAEEA 360 (388)
Q Consensus 343 ~~~~~~~a~~l~~~~~~~ 360 (388)
..+-+.+.++++.+++.
T Consensus 149 -~~~~~~~~~~R~~~k~~ 165 (205)
T TIGR01470 149 -GDLATLAATWRDAVKKR 165 (205)
T ss_pred -HHHHHHHHHHHHHHHhh
Confidence 23666777777777754
No 200
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=33.24 E-value=1.9e+02 Score=27.69 Aligned_cols=104 Identities=16% Similarity=0.190 Sum_probs=66.1
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcce
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGG 270 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~ 270 (388)
+-+=.+.+|.++ +.+++-++..+.+++.--..+ .|+ .+ ...-..|++..++|..+++
T Consensus 147 ktvGIiG~GrIG-------~avA~r~~~Fgm~v~y~~~~~--------~~~-~~-----~~~~~~y~~l~ell~~sDi-- 203 (324)
T COG1052 147 KTLGIIGLGRIG-------QAVARRLKGFGMKVLYYDRSP--------NPE-AE-----KELGARYVDLDELLAESDI-- 203 (324)
T ss_pred CEEEEECCCHHH-------HHHHHHHhcCCCEEEEECCCC--------ChH-HH-----hhcCceeccHHHHHHhCCE--
Confidence 345566666654 344555555688877654432 111 10 1111567778889999998
Q ss_pred eeeccCchhHHHHHhhCCcEEecCCcc--chhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHH
Q 047540 271 FFTHSGWNSTIESLCAGVPMICWPFLG--DQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRE 336 (388)
Q Consensus 271 ~IthgG~~s~~eal~~GvP~i~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ 336 (388)
++-||. ... .+..|++.+ +.++=|..+-+..+..-++.+.+.++|++
T Consensus 204 i~l~~P------------------lt~~T~hLin~~~l-~~mk~ga~lVNtaRG~~VDe~ALi~AL~~ 252 (324)
T COG1052 204 ISLHCP------------------LTPETRHLINAEEL-AKMKPGAILVNTARGGLVDEQALIDALKS 252 (324)
T ss_pred EEEeCC------------------CChHHhhhcCHHHH-HhCCCCeEEEECCCccccCHHHHHHHHHh
Confidence 777764 433 345588888 67787777667777778888888888875
No 201
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=33.15 E-value=2.7e+02 Score=26.81 Aligned_cols=106 Identities=16% Similarity=0.243 Sum_probs=64.3
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcc
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVG 269 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~ 269 (388)
.+.+..+.+|+++ ..+++.|...+..+....+.+ .+.+...+. -..+++-.+.+..+++
T Consensus 162 gK~vgilG~G~IG-------~~ia~rL~~Fg~~i~y~~r~~--------~~~~~~~~~-----~~~~~d~~~~~~~sD~- 220 (336)
T KOG0069|consen 162 GKTVGILGLGRIG-------KAIAKRLKPFGCVILYHSRTQ--------LPPEEAYEY-----YAEFVDIEELLANSDV- 220 (336)
T ss_pred CCEEEEecCcHHH-------HHHHHhhhhccceeeeecccC--------CchhhHHHh-----cccccCHHHHHhhCCE-
Confidence 4578889999876 455666666674444444333 222111111 1114566778888887
Q ss_pred eeeeccCchhHHHHHhhCCcEEecCCcc--chhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHH
Q 047540 270 GFFTHSGWNSTIESLCAGVPMICWPFLG--DQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRE 336 (388)
Q Consensus 270 ~~IthgG~~s~~eal~~GvP~i~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ 336 (388)
+|-|| |... ..-.|.+.+ +.++-|..|-+..+.+-++++++.++++.
T Consensus 221 -ivv~~------------------pLt~~T~~liNk~~~-~~mk~g~vlVN~aRG~iide~~l~eaL~s 269 (336)
T KOG0069|consen 221 -IVVNC------------------PLTKETRHLINKKFI-EKMKDGAVLVNTARGAIIDEEALVEALKS 269 (336)
T ss_pred -EEEec------------------CCCHHHHHHhhHHHH-HhcCCCeEEEeccccccccHHHHHHHHhc
Confidence 66554 5544 345588888 67788777755555567888888887753
No 202
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=33.13 E-value=71 Score=20.73 Aligned_cols=26 Identities=15% Similarity=0.455 Sum_probs=18.9
Q ss_pred CHHHHHHHHHHHHcCc-hHHHHHHHHHHHH
Q 047540 326 GRNEVEKLVRELMEGE-KGMQMRNKASEWK 354 (388)
Q Consensus 326 ~~~~l~~ai~~vl~~~-~~~~~~~~a~~l~ 354 (388)
++++|.+||..+.++. + +++.|+..+
T Consensus 1 tee~l~~Ai~~v~~g~~S---~r~AA~~yg 27 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGKMS---IRKAAKKYG 27 (45)
T ss_dssp -HHHHHHHHHHHHTTSS----HHHHHHHHT
T ss_pred CHHHHHHHHHHHHhCCCC---HHHHHHHHC
Confidence 4688999999998773 4 777776654
No 203
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=33.04 E-value=80 Score=27.83 Aligned_cols=43 Identities=19% Similarity=0.420 Sum_probs=32.2
Q ss_pred HHHHHHHHHhhcC--CCCccEEEEcCCcchHHHHHHHhCCCeEEE
Q 047540 28 QPFLDLLQKLKSS--SNSVSCIISDGFMPFTVTAAQQLGIPIALF 70 (388)
Q Consensus 28 ~~~~~ll~~l~~~--~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~ 70 (388)
..++.+++.+... .-.+.+||+|-....+..-|+..|||++.+
T Consensus 12 SNlqaiida~~~~~~~a~i~~Visd~~~A~~lerA~~~gIpt~~~ 56 (200)
T COG0299 12 SNLQAIIDAIKGGKLDAEIVAVISDKADAYALERAAKAGIPTVVL 56 (200)
T ss_pred ccHHHHHHHHhcCCCCcEEEEEEeCCCCCHHHHHHHHcCCCEEEe
Confidence 3456666665421 015889999998888999999999999876
No 204
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=31.40 E-value=98 Score=28.46 Aligned_cols=39 Identities=23% Similarity=0.418 Sum_probs=27.7
Q ss_pred ccHHHHHHHHHhhcCCCCccEEEEcCCcch-------HHHHHHHhCCCeEEE
Q 047540 26 MLQPFLDLLQKLKSSSNSVSCIISDGFMPF-------TVTAAQQLGIPIALF 70 (388)
Q Consensus 26 ~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~-------~~~~A~~lgIP~v~~ 70 (388)
....+.+++++. ++|++| |...++ +..+|+..|||++.|
T Consensus 54 ~~e~l~~~l~e~-----~i~llI-DATHPyAa~iS~Na~~aake~gipy~r~ 99 (257)
T COG2099 54 GAEGLAAFLREE-----GIDLLI-DATHPYAARISQNAARAAKETGIPYLRL 99 (257)
T ss_pred CHHHHHHHHHHc-----CCCEEE-ECCChHHHHHHHHHHHHHHHhCCcEEEE
Confidence 345566666664 887765 776665 456689999999987
No 205
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=31.21 E-value=64 Score=29.48 Aligned_cols=34 Identities=21% Similarity=0.320 Sum_probs=23.8
Q ss_pred CCccEEE-EcCCc-chHHHHHHHhCCCeEEEccCch
Q 047540 42 NSVSCII-SDGFM-PFTVTAAQQLGIPIALFFTIAA 75 (388)
Q Consensus 42 ~~~D~iI-~D~~~-~~~~~~A~~lgIP~v~~~~~~~ 75 (388)
.-||+++ +|+.. --+..=|.++|||+|.+.-+.+
T Consensus 155 ~~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn~ 190 (252)
T COG0052 155 GLPDVLFVIDPRKEKIAVKEANKLGIPVVALVDTNC 190 (252)
T ss_pred CCCCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCCC
Confidence 4588765 56633 4566779999999999854443
No 206
>cd06559 Endonuclease_V Endonuclease_V, a DNA repair enzyme that initiates repair of nitrosative deaminated purine bases. Endonuclease_V (EndoV) is an enzyme that can initiate repair of all possible deaminated DNA bases. EndoV cleaves the DNA strand containing lesions at the second phosphodiester bond 3' to the lesion using Mg2+ as a cofactor. EndoV homologs are conserved throughout all domains of life from bacteria to humans. EndoV is encoded by the nfi gene and nfi null mutant mice have a phenotype prone to cancer. The ability of endonuclease V to recognize mismatches and abnormal replicative DNA structures suggests that the enzyme plays an important role in DNA metabolism. The details of downstream processing for the EndoV pathway remain unknown.
Probab=31.18 E-value=47 Score=29.65 Aligned_cols=38 Identities=24% Similarity=0.292 Sum_probs=25.0
Q ss_pred HHHHHHHhhcCCCCccEEEEcCCcch-------HHHHHHHhCCCeEEE
Q 047540 30 FLDLLQKLKSSSNSVSCIISDGFMPF-------TVTAAQQLGIPIALF 70 (388)
Q Consensus 30 ~~~ll~~l~~~~~~~D~iI~D~~~~~-------~~~~A~~lgIP~v~~ 70 (388)
+.++++.+. ..||+|++|.+-.. |..+.-.+++|+|.+
T Consensus 83 l~~~~~~l~---~~PDlilVDG~G~~HpR~~GlA~HlGv~l~~PtIGV 127 (208)
T cd06559 83 LLEALEKLK---TKPDLLLVDGHGIAHPRRFGLASHLGVLLDLPTIGV 127 (208)
T ss_pred HHHHHHhCC---CCCCEEEEeCCccccCCCcchhheeeeecCCCEEEE
Confidence 445555553 37999999986543 444555667777776
No 207
>PRK06487 glycerate dehydrogenase; Provisional
Probab=30.97 E-value=1.9e+02 Score=27.51 Aligned_cols=101 Identities=15% Similarity=0.097 Sum_probs=56.9
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcc
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVG 269 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~ 269 (388)
++.+..+.+|.++ +++++-+...|.+++..-... .+. ...+++-.++|+.+++
T Consensus 148 gktvgIiG~G~IG-------~~vA~~l~~fgm~V~~~~~~~--------~~~-----------~~~~~~l~ell~~sDi- 200 (317)
T PRK06487 148 GKTLGLLGHGELG-------GAVARLAEAFGMRVLIGQLPG--------RPA-----------RPDRLPLDELLPQVDA- 200 (317)
T ss_pred CCEEEEECCCHHH-------HHHHHHHhhCCCEEEEECCCC--------Ccc-----------cccccCHHHHHHhCCE-
Confidence 3568888888876 344555555688876432210 000 0123456678999988
Q ss_pred eeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHH
Q 047540 270 GFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVR 335 (388)
Q Consensus 270 ~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~ 335 (388)
++.|+-.+.- -.+..|+..+ ..++=|-.+-+..+..-++.+.|.++++
T Consensus 201 -v~l~lPlt~~----------------T~~li~~~~~-~~mk~ga~lIN~aRG~vVde~AL~~AL~ 248 (317)
T PRK06487 201 -LTLHCPLTEH----------------TRHLIGAREL-ALMKPGALLINTARGGLVDEQALADALR 248 (317)
T ss_pred -EEECCCCChH----------------HhcCcCHHHH-hcCCCCeEEEECCCccccCHHHHHHHHH
Confidence 7777643211 1344566666 4555544443555555666666666665
No 208
>PF04493 Endonuclease_5: Endonuclease V; InterPro: IPR007581 Endonuclease V is specific for single-stranded DNA, for duplex DNA that contains uracil, or that is damaged []. Matrix metalloproteinase-1 (MMP-1) is the major enzyme responsible for collagen 1 digestion. It is induced by exposure to sunlight, but is reduced with treatment of DNA repair enzyme endonuclease V []. This family consequently has potential medical importance []. This endonuclease also appears in bifunctional enzymes, such as the bifunctional methyltransferase/endonuclease in Thermoplasma acidophilum.; GO: 0004519 endonuclease activity, 0006281 DNA repair; PDB: 3GA2_A 2W36_A 3HD0_A 2W35_B 3GOC_B.
Probab=30.37 E-value=90 Score=27.80 Aligned_cols=38 Identities=32% Similarity=0.384 Sum_probs=24.2
Q ss_pred HHHHHHHhhcCCCCccEEEEcCCcc-------hHHHHHHHhCCCeEEE
Q 047540 30 FLDLLQKLKSSSNSVSCIISDGFMP-------FTVTAAQQLGIPIALF 70 (388)
Q Consensus 30 ~~~ll~~l~~~~~~~D~iI~D~~~~-------~~~~~A~~lgIP~v~~ 70 (388)
+.++++.+. .++|+|++|.+-. .|..++-.+++|++.+
T Consensus 79 ~l~~l~~l~---~~~dvilvDG~G~~HpR~~GlA~HlGv~l~iPtIGV 123 (206)
T PF04493_consen 79 ILEALEKLK---NKPDVILVDGHGILHPRRFGLASHLGVLLDIPTIGV 123 (206)
T ss_dssp HHHHHHTSS---S--SCEEEES-SSSSTTS--HHHHHHHHHTS-EEEE
T ss_pred HHHHHHHhc---ccCCEEEEeCceeecCCCcChhheeeeccCCCEEEE
Confidence 345555554 4799999998643 3667788889999987
No 209
>PRK13057 putative lipid kinase; Reviewed
Probab=29.98 E-value=1.3e+02 Score=27.91 Aligned_cols=29 Identities=14% Similarity=0.200 Sum_probs=23.2
Q ss_pred CCCcceeeeccCchhHHHHH----hhCCcEEecCC
Q 047540 265 HPAVGGFFTHSGWNSTIESL----CAGVPMICWPF 295 (388)
Q Consensus 265 ~~~~~~~IthgG~~s~~eal----~~GvP~i~~P~ 295 (388)
..++ +|.-||-||+.|++ ..++|+-++|.
T Consensus 50 ~~d~--iiv~GGDGTv~~v~~~l~~~~~~lgiiP~ 82 (287)
T PRK13057 50 GVDL--VIVGGGDGTLNAAAPALVETGLPLGILPL 82 (287)
T ss_pred CCCE--EEEECchHHHHHHHHHHhcCCCcEEEECC
Confidence 3444 99999999998885 34789999996
No 210
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the N-terminal TPP binding domain of TPP enzymes.; GO: 0030976 thiamine pyrophosphate binding; PDB: 3HWX_1 3FLM_B 3HWW_A 2JLC_A 2JLA_A 2VBG_A 2VBF_B 2Q29_A 2Q27_B 2Q28_B ....
Probab=29.77 E-value=1.4e+02 Score=25.36 Aligned_cols=29 Identities=14% Similarity=0.159 Sum_probs=21.4
Q ss_pred CcceeeeccCc------hhHHHHHhhCCcEEecCC
Q 047540 267 AVGGFFTHSGW------NSTIESLCAGVPMICWPF 295 (388)
Q Consensus 267 ~~~~~IthgG~------~s~~eal~~GvP~i~~P~ 295 (388)
+..++++|.|- +++.+|...++|+|++.-
T Consensus 64 ~~~v~~~~~GpG~~n~~~~l~~A~~~~~Pvl~i~g 98 (172)
T PF02776_consen 64 RPGVVIVTSGPGATNALTGLANAYADRIPVLVITG 98 (172)
T ss_dssp SEEEEEEETTHHHHTTHHHHHHHHHTT-EEEEEEE
T ss_pred cceEEEeecccchHHHHHHHhhcccceeeEEEEec
Confidence 34448888874 467899999999999864
No 211
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=29.65 E-value=2.1e+02 Score=27.09 Aligned_cols=102 Identities=14% Similarity=0.108 Sum_probs=62.0
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcc
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVG 269 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~ 269 (388)
++.+..|.+|.++ +++++-+...|.+++..-... ... + ....+.+-.++|+.+++
T Consensus 145 gktvGIiG~G~IG-------~~vA~~~~~fgm~V~~~d~~~--------~~~-------~--~~~~~~~l~ell~~sDv- 199 (311)
T PRK08410 145 GKKWGIIGLGTIG-------KRVAKIAQAFGAKVVYYSTSG--------KNK-------N--EEYERVSLEELLKTSDI- 199 (311)
T ss_pred CCEEEEECCCHHH-------HHHHHHHhhcCCEEEEECCCc--------ccc-------c--cCceeecHHHHhhcCCE-
Confidence 3578888888876 233444444588776442211 000 0 01234566779999997
Q ss_pred eeeeccCchhHHHHHhhCCcEEecCCcc--chhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHH
Q 047540 270 GFFTHSGWNSTIESLCAGVPMICWPFLG--DQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRE 336 (388)
Q Consensus 270 ~~IthgG~~s~~eal~~GvP~i~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ 336 (388)
++.|+ |... ....|++.+ +.++=|-.+-+..+..-++.+.|.++++.
T Consensus 200 -v~lh~------------------Plt~~T~~li~~~~~-~~Mk~~a~lIN~aRG~vVDe~AL~~AL~~ 248 (311)
T PRK08410 200 -ISIHA------------------PLNEKTKNLIAYKEL-KLLKDGAILINVGRGGIVNEKDLAKALDE 248 (311)
T ss_pred -EEEeC------------------CCCchhhcccCHHHH-HhCCCCeEEEECCCccccCHHHHHHHHHc
Confidence 76665 5543 345677777 66676655546666667888888887763
No 212
>PRK06932 glycerate dehydrogenase; Provisional
Probab=29.55 E-value=2.1e+02 Score=27.14 Aligned_cols=101 Identities=17% Similarity=0.108 Sum_probs=59.6
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcce
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGG 270 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~ 270 (388)
+.+..|.+|.++ +++++-++..|.+++.. .... .. . ....+.+-.++|+.+++
T Consensus 148 ktvgIiG~G~IG-------~~va~~l~~fg~~V~~~-~~~~--------~~--------~-~~~~~~~l~ell~~sDi-- 200 (314)
T PRK06932 148 STLGVFGKGCLG-------TEVGRLAQALGMKVLYA-EHKG--------AS--------V-CREGYTPFEEVLKQADI-- 200 (314)
T ss_pred CEEEEECCCHHH-------HHHHHHHhcCCCEEEEE-CCCc--------cc--------c-cccccCCHHHHHHhCCE--
Confidence 567888888876 34455555668887643 2110 00 0 01234566789999998
Q ss_pred eeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHH
Q 047540 271 FFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVR 335 (388)
Q Consensus 271 ~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~ 335 (388)
++.|+-.+.- ..+..|+..+ +.++=|-.+-+..+..-++.+.|.++++
T Consensus 201 v~l~~Plt~~----------------T~~li~~~~l-~~mk~ga~lIN~aRG~~Vde~AL~~aL~ 248 (314)
T PRK06932 201 VTLHCPLTET----------------TQNLINAETL-ALMKPTAFLINTGRGPLVDEQALLDALE 248 (314)
T ss_pred EEEcCCCChH----------------HhcccCHHHH-HhCCCCeEEEECCCccccCHHHHHHHHH
Confidence 7777643211 1345577777 5566554444555556677777777776
No 213
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=29.32 E-value=1.3e+02 Score=28.36 Aligned_cols=54 Identities=17% Similarity=0.217 Sum_probs=38.2
Q ss_pred CCCcceeeeccCchhHHHHHh----hCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 265 HPAVGGFFTHSGWNSTIESLC----AGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 265 ~~~~~~~IthgG~~s~~eal~----~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
.+++ +|+=||-||+++++. .++|++++... + +|.. ..++.+++.++|.+++++
T Consensus 62 ~~d~--vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G------------~--lGFl-------~~~~~~~~~~~l~~~~~g 118 (295)
T PRK01231 62 VCDL--VIVVGGDGSLLGAARALARHNVPVLGINRG------------R--LGFL-------TDIRPDELEFKLAEVLDG 118 (295)
T ss_pred CCCE--EEEEeCcHHHHHHHHHhcCCCCCEEEEeCC------------c--cccc-------ccCCHHHHHHHHHHHHcC
Confidence 3555 999999999999875 36788777641 1 2222 246778888999888875
Q ss_pred c
Q 047540 341 E 341 (388)
Q Consensus 341 ~ 341 (388)
+
T Consensus 119 ~ 119 (295)
T PRK01231 119 H 119 (295)
T ss_pred C
Confidence 4
No 214
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=28.82 E-value=78 Score=32.78 Aligned_cols=28 Identities=14% Similarity=0.307 Sum_probs=22.1
Q ss_pred CcceeeeccCc------hhHHHHHhhCCcEEecC
Q 047540 267 AVGGFFTHSGW------NSTIESLCAGVPMICWP 294 (388)
Q Consensus 267 ~~~~~IthgG~------~s~~eal~~GvP~i~~P 294 (388)
..+++++|.|- +.+.+|...++|+|++-
T Consensus 76 ~~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 76 KPAVCMACSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred CCeEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 34448888774 46899999999999984
No 215
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=28.16 E-value=1.7e+02 Score=25.32 Aligned_cols=101 Identities=11% Similarity=0.015 Sum_probs=51.4
Q ss_pred hHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchh-HHHhhhcCcccccc
Q 047540 178 TECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSE-FEVKAKETGFIARW 256 (388)
Q Consensus 178 ~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~ 256 (388)
.++-++|.+.. ...|+.|. ....+..+.++..+.+..++=++... ++.. ..........+++.
T Consensus 22 ~~lG~~la~~g----~~lV~GGg----~~GlM~a~a~ga~~~gG~viGi~p~~--------l~~~~~~~~~~~~~i~~~~ 85 (178)
T TIGR00730 22 AELGAYLAGQG----WGLVYGGG----RVGLMGAIADAAMENGGTAVGVNPSG--------LFSGEVVHQNLTELIEVNG 85 (178)
T ss_pred HHHHHHHHHCC----CEEEECCC----hHhHHHHHHHHHHhcCCeEEEecchh--------hhhhhccCCCCCceEEECC
Confidence 45567775554 66676664 23455667777776676655443211 1100 00000011222222
Q ss_pred c-ChHhhhcCCCcceeeeccCchhHHHHHh---------hCCcEEecC
Q 047540 257 C-PQEEVLNHPAVGGFFTHSGWNSTIESLC---------AGVPMICWP 294 (388)
Q Consensus 257 ~-pq~~~L~~~~~~~~IthgG~~s~~eal~---------~GvP~i~~P 294 (388)
. ....+|-..+-..++--||.||+-|.+. +.+|++++=
T Consensus 86 ~~~Rk~~m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n 133 (178)
T TIGR00730 86 MHERKAMMAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFN 133 (178)
T ss_pred HHHHHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEEC
Confidence 2 2333443333334666788999877632 589988875
No 216
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=28.05 E-value=1.3e+02 Score=28.63 Aligned_cols=54 Identities=11% Similarity=0.274 Sum_probs=37.0
Q ss_pred CCCcceeeeccCchhHHHHHhh----CCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 265 HPAVGGFFTHSGWNSTIESLCA----GVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 265 ~~~~~~~IthgG~~s~~eal~~----GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
.+++ +|+=||-||++.++.. ++|++++-. - .+|.. ..++.+++.++|.+++++
T Consensus 68 ~~Dl--vi~iGGDGTlL~aar~~~~~~iPilGIN~------------G--~lGFL-------t~~~~~~~~~~l~~l~~g 124 (305)
T PRK02649 68 SMKF--AIVLGGDGTVLSAARQLAPCGIPLLTINT------------G--HLGFL-------TEAYLNQLDEAIDQVLAG 124 (305)
T ss_pred CcCE--EEEEeCcHHHHHHHHHhcCCCCcEEEEeC------------C--CCccc-------ccCCHHHHHHHHHHHHcC
Confidence 3455 9999999999998764 778887753 1 12222 235667788888887765
Q ss_pred c
Q 047540 341 E 341 (388)
Q Consensus 341 ~ 341 (388)
+
T Consensus 125 ~ 125 (305)
T PRK02649 125 Q 125 (305)
T ss_pred C
Confidence 4
No 217
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=27.25 E-value=96 Score=30.94 Aligned_cols=25 Identities=24% Similarity=0.575 Sum_probs=21.7
Q ss_pred CccEEEEcCCcchHHHHHHHhCCCeEEE
Q 047540 43 SVSCIISDGFMPFTVTAAQQLGIPIALF 70 (388)
Q Consensus 43 ~~D~iI~D~~~~~~~~~A~~lgIP~v~~ 70 (388)
+||++|.+.. ...+|+++|||.+.+
T Consensus 372 ~~dliiG~s~---~~~~a~~~~ip~~~~ 396 (429)
T cd03466 372 KIDVLIGNSY---GRRIAEKLGIPLIRI 396 (429)
T ss_pred CCCEEEECch---hHHHHHHcCCCEEEe
Confidence 8999999873 578999999999865
No 218
>CHL00076 chlB photochlorophyllide reductase subunit B
Probab=27.12 E-value=95 Score=31.83 Aligned_cols=26 Identities=19% Similarity=0.290 Sum_probs=22.0
Q ss_pred CccEEEEcCCcchHHHHHHHhCCCeEEEc
Q 047540 43 SVSCIISDGFMPFTVTAAQQLGIPIALFF 71 (388)
Q Consensus 43 ~~D~iI~D~~~~~~~~~A~~lgIP~v~~~ 71 (388)
+||+||.+. +...+|+++|||++.++
T Consensus 374 ~pdliiGs~---~er~ia~~lgiP~~~is 399 (513)
T CHL00076 374 EPSAIFGTQ---MERHIGKRLDIPCGVIS 399 (513)
T ss_pred CCCEEEECc---hhhHHHHHhCCCEEEee
Confidence 899999887 56677999999998763
No 219
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=26.76 E-value=58 Score=30.24 Aligned_cols=27 Identities=11% Similarity=0.228 Sum_probs=22.3
Q ss_pred CCcceeeeccCchhHHHHHh------hCCcEEecC
Q 047540 266 PAVGGFFTHSGWNSTIESLC------AGVPMICWP 294 (388)
Q Consensus 266 ~~~~~~IthgG~~s~~eal~------~GvP~i~~P 294 (388)
+++ +|+-||-||++.++. .++|++++.
T Consensus 36 ~Dl--vi~iGGDGT~L~a~~~~~~~~~~iPilGIN 68 (265)
T PRK04885 36 PDI--VISVGGDGTLLSAFHRYENQLDKVRFVGVH 68 (265)
T ss_pred CCE--EEEECCcHHHHHHHHHhcccCCCCeEEEEe
Confidence 455 999999999999976 478888776
No 220
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=26.73 E-value=60 Score=29.78 Aligned_cols=28 Identities=18% Similarity=0.197 Sum_probs=22.3
Q ss_pred CCcceeeeccCchhHHHHHhh----CCcEEecCC
Q 047540 266 PAVGGFFTHSGWNSTIESLCA----GVPMICWPF 295 (388)
Q Consensus 266 ~~~~~~IthgG~~s~~eal~~----GvP~i~~P~ 295 (388)
+++ +|+-||-||++.++.. ++|++++-.
T Consensus 26 ~Dl--vi~iGGDGTlL~a~~~~~~~~~PvlGIN~ 57 (246)
T PRK04761 26 ADV--IVALGGDGFMLQTLHRYMNSGKPVYGMNR 57 (246)
T ss_pred CCE--EEEECCCHHHHHHHHHhcCCCCeEEEEeC
Confidence 455 9999999999988654 688887764
No 221
>KOG0081 consensus GTPase Rab27, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.67 E-value=1.6e+02 Score=25.09 Aligned_cols=42 Identities=12% Similarity=0.174 Sum_probs=30.0
Q ss_pred HHHHHHHhhcC--CCCccEEEEcCCcc----------hHHHHHHHhCCCeEEEc
Q 047540 30 FLDLLQKLKSS--SNSVSCIISDGFMP----------FTVTAAQQLGIPIALFF 71 (388)
Q Consensus 30 ~~~ll~~l~~~--~~~~D~iI~D~~~~----------~~~~~A~~lgIP~v~~~ 71 (388)
+++++..|... .+.||+|++.--.- -+..+|+++|||++-.+
T Consensus 109 vrnWlSQL~~hAYcE~PDivlcGNK~DL~~~R~Vs~~qa~~La~kyglPYfETS 162 (219)
T KOG0081|consen 109 VRNWLSQLQTHAYCENPDIVLCGNKADLEDQRVVSEDQAAALADKYGLPYFETS 162 (219)
T ss_pred HHHHHHHHHHhhccCCCCEEEEcCccchhhhhhhhHHHHHHHHHHhCCCeeeec
Confidence 45666666533 47999999865321 36788999999998764
No 222
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=26.47 E-value=1.5e+02 Score=30.32 Aligned_cols=54 Identities=9% Similarity=0.197 Sum_probs=37.5
Q ss_pred CCCcceeeeccCchhHHHHHhh----CCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 265 HPAVGGFFTHSGWNSTIESLCA----GVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 265 ~~~~~~~IthgG~~s~~eal~~----GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
.+++ +|+=||-||++.++.. ++|++++- + -. +|..- .++.+++.++|.+++++
T Consensus 262 ~~Dl--VIsiGGDGTlL~Aar~~~~~~iPILGIN-----------~-G~--LGFLt-------~i~~~e~~~~Le~il~G 318 (508)
T PLN02935 262 KVDL--VITLGGDGTVLWAASMFKGPVPPVVPFS-----------M-GS--LGFMT-------PFHSEQYRDCLDAILKG 318 (508)
T ss_pred CCCE--EEEECCcHHHHHHHHHhccCCCcEEEEe-----------C-CC--cceec-------ccCHHHHHHHHHHHHcC
Confidence 4555 9999999999998764 46776553 1 11 33332 36778888889888876
Q ss_pred c
Q 047540 341 E 341 (388)
Q Consensus 341 ~ 341 (388)
+
T Consensus 319 ~ 319 (508)
T PLN02935 319 P 319 (508)
T ss_pred C
Confidence 5
No 223
>PRK11914 diacylglycerol kinase; Reviewed
Probab=26.41 E-value=3.4e+02 Score=25.38 Aligned_cols=26 Identities=15% Similarity=0.201 Sum_probs=22.1
Q ss_pred eeeeccCchhHHHHH----hhCCcEEecCC
Q 047540 270 GFFTHSGWNSTIESL----CAGVPMICWPF 295 (388)
Q Consensus 270 ~~IthgG~~s~~eal----~~GvP~i~~P~ 295 (388)
.+|.-||-||+.|++ ..++|+-++|.
T Consensus 67 ~vvv~GGDGTi~evv~~l~~~~~~lgiiP~ 96 (306)
T PRK11914 67 ALVVVGGDGVISNALQVLAGTDIPLGIIPA 96 (306)
T ss_pred EEEEECCchHHHHHhHHhccCCCcEEEEeC
Confidence 399999999999887 34789999996
No 224
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=26.33 E-value=3.5e+02 Score=25.42 Aligned_cols=90 Identities=11% Similarity=0.047 Sum_probs=51.0
Q ss_pred hHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCccccccc
Q 047540 178 TECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWC 257 (388)
Q Consensus 178 ~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 257 (388)
.++.+...... -+++-+-........+...+..+.+++++.+.++++=+|....... +.. . ...
T Consensus 116 ~E~er~v~~~g-f~g~~l~p~~~~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~~~---~~~----------~--~~~ 179 (293)
T COG2159 116 EELERRVRELG-FVGVKLHPVAQGFYPDDPRLYPIYEAAEELGVPVVIHTGAGPGGAG---LEK----------G--HSD 179 (293)
T ss_pred HHHHHHHHhcC-ceEEEecccccCCCCCChHHHHHHHHHHHcCCCEEEEeCCCCCCcc---ccc----------C--CCC
Confidence 45666665543 2233332223333455666888999999999999997664321100 000 0 011
Q ss_pred C-h--HhhhcCCCcceeeeccC--chhHHHH
Q 047540 258 P-Q--EEVLNHPAVGGFFTHSG--WNSTIES 283 (388)
Q Consensus 258 p-q--~~~L~~~~~~~~IthgG--~~s~~ea 283 (388)
| + .-...+|+++.++.|+| ..=..|+
T Consensus 180 p~~~~~va~~fP~l~IVl~H~G~~~p~~~~a 210 (293)
T COG2159 180 PLYLDDVARKFPELKIVLGHMGEDYPWELEA 210 (293)
T ss_pred chHHHHHHHHCCCCcEEEEecCCCCchhHHH
Confidence 2 1 12446889999999999 5444555
No 225
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=26.26 E-value=4.7e+02 Score=25.84 Aligned_cols=140 Identities=10% Similarity=0.049 Sum_probs=73.4
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcC-cccccc-------cChHhh
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKET-GFIARW-------CPQEEV 262 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~-------~pq~~~ 262 (388)
+.+++.-.||++.. ....+++.|.+.+..|-.+....-.. -+.....+...++ ++..-| .++.++
T Consensus 7 k~IllgvTGsiaa~---k~~~lv~~L~~~g~~V~vv~T~~A~~----fi~~~~l~~l~~~~V~~~~~~~~~~~~~~hi~l 79 (399)
T PRK05579 7 KRIVLGVSGGIAAY---KALELVRRLRKAGADVRVVMTEAAKK----FVTPLTFQALSGNPVSTDLWDPAAEAAMGHIEL 79 (399)
T ss_pred CeEEEEEeCHHHHH---HHHHHHHHHHhCCCEEEEEECHhHHH----HHhHHHHHHhhCCceEccccccccCCCcchhhc
Confidence 45666666775432 34556677777777665554422100 0011111222323 222212 223344
Q ss_pred hcCCCcceeeeccCchhHHH-------------HHhhCCcEEecCCcc----c---hhHhHHHHhhhhceeEEeeec---
Q 047540 263 LNHPAVGGFFTHSGWNSTIE-------------SLCAGVPMICWPFLG----D---QATNCRYTCNEWGVGMDITNS--- 319 (388)
Q Consensus 263 L~~~~~~~~IthgG~~s~~e-------------al~~GvP~i~~P~~~----D---Q~~na~~v~~~~G~G~~l~~~--- 319 (388)
...+++ .+|.-|-+||+.. ++.+++|+++.|-+. . ...|..++ .++|+-+.-...
T Consensus 80 ~~~aD~-~vVaPaTaNtlaKiA~GiaDnllt~~~la~~~pvvi~Pamn~~m~~~p~~~~Nl~~L-~~~G~~ii~P~~g~l 157 (399)
T PRK05579 80 AKWADL-VLIAPATADLIAKLAHGIADDLLTTTLLATTAPVLVAPAMNTQMWENPATQRNLATL-RSRGVEIIGPASGRL 157 (399)
T ss_pred ccccCE-EEEeeCCHHHHHHHHcccCCcHHHHHHHhcCCCEEEEeCCChhHcCCHHHHHHHHHH-HHCCCEEECCCCccc
Confidence 444554 5777777776643 366799999999533 2 33467777 556765443100
Q ss_pred ---C--CCCCCCHHHHHHHHHHHHc
Q 047540 320 ---G--DDNQVGRNEVEKLVRELME 339 (388)
Q Consensus 320 ---~--~~~~~~~~~l~~ai~~vl~ 339 (388)
+ +.+-.+.++|...+.+.+.
T Consensus 158 a~~~~g~gr~~~~~~I~~~~~~~~~ 182 (399)
T PRK05579 158 ACGDVGPGRMAEPEEIVAAAERALS 182 (399)
T ss_pred cCCCcCCCCCCCHHHHHHHHHHHhh
Confidence 0 0134677888887777663
No 226
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=26.23 E-value=3.2e+02 Score=25.31 Aligned_cols=99 Identities=12% Similarity=0.174 Sum_probs=50.0
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHH---HH-hcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccc-cccCh--Hhhh
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAM---GL-VNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIA-RWCPQ--EEVL 263 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~---al-~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~pq--~~~L 263 (388)
++.|.++.-.....+.+..+.+++ .+ ++.+.++++...... .+......+.++.+++..+. ..-++ ..++
T Consensus 172 ~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~---~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i 248 (298)
T TIGR03609 172 EPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQP---QDLPLARALRDQLLGPAEVLSPLDPEELLGLF 248 (298)
T ss_pred CCeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcc---hhHHHHHHHHHhcCCCcEEEecCCHHHHHHHH
Confidence 467777765432233333334433 33 234777776643210 00011122333332222222 22222 2467
Q ss_pred cCCCcceeeeccCchhHHHHHhhCCcEEecCC
Q 047540 264 NHPAVGGFFTHSGWNSTIESLCAGVPMICWPF 295 (388)
Q Consensus 264 ~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~ 295 (388)
+++++ +|+.= +-++.=|+.+|||.+++++
T Consensus 249 ~~~~~--vI~~R-lH~~I~A~~~gvP~i~i~y 277 (298)
T TIGR03609 249 ASARL--VIGMR-LHALILAAAAGVPFVALSY 277 (298)
T ss_pred hhCCE--EEEec-hHHHHHHHHcCCCEEEeec
Confidence 78876 88742 3457778999999998854
No 227
>cd01981 Pchlide_reductase_B Pchlide_reductase_B: B protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=26.13 E-value=1.1e+02 Score=30.52 Aligned_cols=26 Identities=19% Similarity=0.263 Sum_probs=21.7
Q ss_pred CccEEEEcCCcchHHHHHHHhCCCeEEEc
Q 047540 43 SVSCIISDGFMPFTVTAAQQLGIPIALFF 71 (388)
Q Consensus 43 ~~D~iI~D~~~~~~~~~A~~lgIP~v~~~ 71 (388)
+||++|.+. ....+|+++|+|.+.+.
T Consensus 370 ~pdliig~~---~~~~~a~~~gip~~~~~ 395 (430)
T cd01981 370 EPELIFGTQ---MERHIGKRLDIPCAVIS 395 (430)
T ss_pred CCCEEEecc---hhhHHHHHcCCCEEEEe
Confidence 899999987 45567899999998763
No 228
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=25.84 E-value=3.4e+02 Score=27.68 Aligned_cols=166 Identities=11% Similarity=0.068 Sum_probs=91.6
Q ss_pred CcEEEeeCC-Ccc-CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchh---HHHhhhcCcccccccCh-Hh--hh
Q 047540 192 SVVYVNFGS-SVY-LTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSE---FEVKAKETGFIARWCPQ-EE--VL 263 (388)
Q Consensus 192 ~~v~vs~Gs-~~~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~pq-~~--~L 263 (388)
+.-++.+-| ... ...+.+..++..+-+.+.+++..-.+ +.. +.+. +.++.+.++.+.-|.+. .. ++
T Consensus 293 ~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~g-d~~-----le~~~~~la~~~~~~~~~~i~~~~~la~~i~ 366 (487)
T COG0297 293 PGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTG-DPE-----LEEALRALASRHPGRVLVVIGYDEPLAHLIY 366 (487)
T ss_pred CCcEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecC-cHH-----HHHHHHHHHHhcCceEEEEeeecHHHHHHHH
Confidence 444444444 332 22355555555555566666544332 110 2222 33444556666555443 33 55
Q ss_pred cCCCcceeee-----ccCchhHHHHHhhCCcEEecCCcc------chhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHH
Q 047540 264 NHPAVGGFFT-----HSGWNSTIESLCAGVPMICWPFLG------DQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEK 332 (388)
Q Consensus 264 ~~~~~~~~It-----hgG~~s~~eal~~GvP~i~~P~~~------DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ 332 (388)
+-+++ |+- -||. |-++++.+|.+-|+.|..+ |-..++ + ..-|.|..+ .. .+.+++..
T Consensus 367 agaD~--~lmPSrfEPcGL-~ql~amryGtvpIv~~tGGLadTV~~~~~~~--~-~~~gtGf~f-----~~-~~~~~l~~ 434 (487)
T COG0297 367 AGADV--ILMPSRFEPCGL-TQLYAMRYGTLPIVRETGGLADTVVDRNEWL--I-QGVGTGFLF-----LQ-TNPDHLAN 434 (487)
T ss_pred hcCCE--EEeCCcCcCCcH-HHHHHHHcCCcceEcccCCccceecCccchh--c-cCceeEEEE-----ec-CCHHHHHH
Confidence 55555 543 3565 5689999999888888743 222222 3 445899999 44 49999999
Q ss_pred HHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHH
Q 047540 333 LVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPVIK 380 (388)
Q Consensus 333 ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~~ 380 (388)
++++.+.= |+.+-..++...+.++.-.-|-+....+.++-...
T Consensus 435 al~rA~~~-----y~~~~~~w~~~~~~~m~~d~sw~~sa~~y~~lY~~ 477 (487)
T COG0297 435 ALRRALVL-----YRAPPLLWRKVQPNAMGADFSWDLSAKEYVELYKP 477 (487)
T ss_pred HHHHHHHH-----hhCCHHHHHHHHHhhcccccCchhHHHHHHHHHHH
Confidence 99987642 34333445555555555444445555555544433
No 229
>cd01976 Nitrogenase_MoFe_alpha Nitrogenase_MoFe_alpha_II: Nitrogenase MoFe protein, beta subunit. A group of proteins similar to the alpha subunit of the MoFe protein of the molybdenum (Mo-) nitrogenase. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Mo-nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=25.62 E-value=89 Score=31.09 Aligned_cols=36 Identities=22% Similarity=0.149 Sum_probs=26.0
Q ss_pred HHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEc
Q 047540 31 LDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFF 71 (388)
Q Consensus 31 ~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~ 71 (388)
.++.+.+++. +||++|.... ...+|+++|||...+.
T Consensus 359 ~e~~~~i~~~--~pDliig~~~---~~~~a~k~giP~~~~~ 394 (421)
T cd01976 359 YELEEFVKRL--KPDLIGSGIK---EKYVFQKMGIPFRQMH 394 (421)
T ss_pred HHHHHHHHHh--CCCEEEecCc---chhhhhhcCCCeEeCC
Confidence 3444443333 9999998874 6678999999997653
No 230
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]
Probab=25.60 E-value=1.6e+02 Score=25.54 Aligned_cols=28 Identities=21% Similarity=0.466 Sum_probs=23.2
Q ss_pred CccEEEEcCC--cchHHHHHHHhCCCeEEE
Q 047540 43 SVSCIISDGF--MPFTVTAAQQLGIPIALF 70 (388)
Q Consensus 43 ~~D~iI~D~~--~~~~~~~A~~lgIP~v~~ 70 (388)
++|.||+=.. .+.|..+|.+||+|++.+
T Consensus 53 ~id~Iv~iea~Gi~~a~~vA~~Lgvp~v~v 82 (179)
T COG0503 53 GIDKIVTIEARGIPLAAAVALELGVPFVPV 82 (179)
T ss_pred CCCEEEEEccccchhHHHHHHHhCCCEEEE
Confidence 7999997553 356889999999999986
No 231
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=25.56 E-value=2.1e+02 Score=23.54 Aligned_cols=28 Identities=14% Similarity=0.191 Sum_probs=21.5
Q ss_pred cceeeeccCc------hhHHHHHhhCCcEEecCC
Q 047540 268 VGGFFTHSGW------NSTIESLCAGVPMICWPF 295 (388)
Q Consensus 268 ~~~~IthgG~------~s~~eal~~GvP~i~~P~ 295 (388)
..++++|+|- +.+.+|...++|+|++.-
T Consensus 60 ~~v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 60 PGVVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred CEEEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 3448888663 467899999999999853
No 232
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=25.32 E-value=71 Score=29.62 Aligned_cols=39 Identities=10% Similarity=0.221 Sum_probs=24.3
Q ss_pred CcEEEeeCCCccCC-HHHHHHHHHHHhc--CCCCEEEEEcCC
Q 047540 192 SVVYVNFGSSVYLT-KQQLTEVAMGLVN--SNHPFLWIIRPD 230 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~-~~~~~~~~~al~~--~~~~~iw~~~~~ 230 (388)
.++++||||...-. .+-+..+-+.++. .+..|.|+..++
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS~ 43 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTSR 43 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-H
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchHH
Confidence 57999999986543 3367777777765 468889998754
No 233
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=25.13 E-value=1.8e+02 Score=26.89 Aligned_cols=54 Identities=7% Similarity=0.168 Sum_probs=35.7
Q ss_pred CCcceeeeccCchhHHHHHhh-----CCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 266 PAVGGFFTHSGWNSTIESLCA-----GVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 266 ~~~~~~IthgG~~s~~eal~~-----GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
+++ +|+=||-||++.++.. .+|++++...+ .+|.. ..++.+++.+++.+++++
T Consensus 40 ~D~--vi~lGGDGT~L~a~~~~~~~~~~pilgIn~~G-------------~lGFL-------~~~~~~~~~~~l~~i~~g 97 (264)
T PRK03501 40 ANI--IVSIGGDGTFLQAVRKTGFREDCLYAGISTKD-------------QLGFY-------CDFHIDDLDKMIQAITKE 97 (264)
T ss_pred ccE--EEEECCcHHHHHHHHHhcccCCCeEEeEecCC-------------CCeEc-------ccCCHHHHHHHHHHHHcC
Confidence 455 9999999999999874 55666554311 12222 235667788888887765
Q ss_pred c
Q 047540 341 E 341 (388)
Q Consensus 341 ~ 341 (388)
+
T Consensus 98 ~ 98 (264)
T PRK03501 98 E 98 (264)
T ss_pred C
Confidence 4
No 234
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=24.85 E-value=1.8e+02 Score=26.09 Aligned_cols=55 Identities=22% Similarity=0.229 Sum_probs=31.7
Q ss_pred hhcCCCcceeeeccCch--hHHHHHh--hCCcEEe------------cCCccchhHhHHHHhhhhceeEEee
Q 047540 262 VLNHPAVGGFFTHSGWN--STIESLC--AGVPMIC------------WPFLGDQATNCRYTCNEWGVGMDIT 317 (388)
Q Consensus 262 ~L~~~~~~~~IthgG~~--s~~eal~--~GvP~i~------------~P~~~DQ~~na~~v~~~~G~G~~l~ 317 (388)
+..+|+++.++.|+|.. -..+++. ...|.+. .+.......-.+.+ +..|.-..+-
T Consensus 159 ~~~~P~l~ii~~H~G~~~~~~~~~~~l~~~~~nvy~d~s~~~~~~~~~~~~~~~~~l~~~~-~~~g~drilf 229 (273)
T PF04909_consen 159 LERFPDLRIILAHLGGPFPWWEEALRLLDRFPNVYVDLSGIPPFWYFWPPSFDRPFLRRAV-DEFGPDRILF 229 (273)
T ss_dssp HHHSTTSEEEESGGGTTHHHHHHHHHHHHHHTTEEEECHSHHSSEEEETTHHCHHHHHHHH-HHHTGGGEEE
T ss_pred HHHhcCCeEEEecCcccchhHHHHHHHHHhCCcccccccccccccccCcccccHHHHHHHH-HHhCCceEEe
Confidence 45689999999999999 3333322 1223222 22233444444444 6778877773
No 235
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=24.70 E-value=71 Score=27.18 Aligned_cols=27 Identities=22% Similarity=0.395 Sum_probs=21.8
Q ss_pred cceeeeccCch------hHHHHHhhCCcEEecC
Q 047540 268 VGGFFTHSGWN------STIESLCAGVPMICWP 294 (388)
Q Consensus 268 ~~~~IthgG~~------s~~eal~~GvP~i~~P 294 (388)
.+++++|+|-| .+.||...++|||++.
T Consensus 61 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 93 (162)
T cd07037 61 PVAVVCTSGTAVANLLPAVVEAYYSGVPLLVLT 93 (162)
T ss_pred CEEEEECCchHHHHHhHHHHHHHhcCCCEEEEE
Confidence 34488888844 6789999999999995
No 236
>cd01965 Nitrogenase_MoFe_beta_like Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (Fe
Probab=24.66 E-value=1.2e+02 Score=30.04 Aligned_cols=37 Identities=27% Similarity=0.372 Sum_probs=28.0
Q ss_pred HHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEE
Q 047540 29 PFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALF 70 (388)
Q Consensus 29 ~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~ 70 (388)
.+.++.+.+++. +||+||.+.. ...+|+++|+|.+.+
T Consensus 359 d~~el~~~i~~~--~pdliig~~~---~~~~a~~~~ip~i~~ 395 (428)
T cd01965 359 DLWDLESLAKEE--PVDLLIGNSH---GRYLARDLGIPLVRV 395 (428)
T ss_pred CHHHHHHHhhcc--CCCEEEECch---hHHHHHhcCCCEEEe
Confidence 445565555544 8999999974 468899999999865
No 237
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=24.56 E-value=98 Score=28.20 Aligned_cols=45 Identities=16% Similarity=0.405 Sum_probs=32.5
Q ss_pred cHHHHHHHHHhhcCCCCccEEEEcCCcc--hHHHHHHHhCCCeEEEccC
Q 047540 27 LQPFLDLLQKLKSSSNSVSCIISDGFMP--FTVTAAQQLGIPIALFFTI 73 (388)
Q Consensus 27 ~~~~~~ll~~l~~~~~~~D~iI~D~~~~--~~~~~A~~lgIP~v~~~~~ 73 (388)
.+.+.++.+.+++. +..+|+++.... .+..+|+..|+|++.+.+.
T Consensus 185 ~~~l~~l~~~ik~~--~v~~i~~e~~~~~~~~~~la~~~g~~vv~ld~l 231 (256)
T PF01297_consen 185 PKDLAELIKLIKEN--KVKCIFTEPQFSSKLAEALAKETGVKVVYLDPL 231 (256)
T ss_dssp HHHHHHHHHHHHHT--T-SEEEEETTS-THHHHHHHHCCT-EEEESSTT
T ss_pred HHHHHHHHHHhhhc--CCcEEEecCCCChHHHHHHHHHcCCcEEEeCCC
Confidence 45566777777766 999999998664 3678899999999887655
No 238
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=24.55 E-value=2e+02 Score=26.64 Aligned_cols=26 Identities=19% Similarity=0.313 Sum_probs=19.6
Q ss_pred eeeeccCchhHHHHHhh-----CCcEEe-cCC
Q 047540 270 GFFTHSGWNSTIESLCA-----GVPMIC-WPF 295 (388)
Q Consensus 270 ~~IthgG~~s~~eal~~-----GvP~i~-~P~ 295 (388)
++|.-||-||+.|++.. ..|.++ +|.
T Consensus 60 ~ivv~GGDGTl~~v~~~l~~~~~~~~lgiiP~ 91 (293)
T TIGR00147 60 TVIAGGGDGTINEVVNALIQLDDIPALGILPL 91 (293)
T ss_pred EEEEECCCChHHHHHHHHhcCCCCCcEEEEcC
Confidence 49999999999997643 345555 896
No 239
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=24.46 E-value=1.6e+02 Score=27.50 Aligned_cols=54 Identities=20% Similarity=0.373 Sum_probs=36.8
Q ss_pred CCCcceeeeccCchhHHHHHhh-CCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCc
Q 047540 265 HPAVGGFFTHSGWNSTIESLCA-GVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGE 341 (388)
Q Consensus 265 ~~~~~~~IthgG~~s~~eal~~-GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~ 341 (388)
.+++ +|+=||-||++.++.. .+|++++-. -. +|.. ..++.+++.+++++++++.
T Consensus 52 ~~D~--vi~lGGDGT~L~a~~~~~~PilGIN~------------G~--lGFL-------~~~~~~~~~~~l~~i~~g~ 106 (271)
T PRK01185 52 NADV--IITIGGDGTILRTLQRAKGPILGINM------------GG--LGFL-------TEIEIDEVGSAIKKLIRGE 106 (271)
T ss_pred CCCE--EEEEcCcHHHHHHHHHcCCCEEEEEC------------CC--CccC-------cccCHHHHHHHHHHHHcCC
Confidence 3455 9999999999998874 456665532 11 2222 2467788888888888764
No 240
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=24.45 E-value=2.9e+02 Score=25.64 Aligned_cols=92 Identities=15% Similarity=0.129 Sum_probs=59.0
Q ss_pred HHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccC
Q 047540 179 ECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCP 258 (388)
Q Consensus 179 ~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p 258 (388)
...++|...+ .++++.+|+.+ .....+...|.+.+.++....... . . + .
T Consensus 122 ~av~~L~~A~---rI~~~G~g~S~----~vA~~~~~~l~~ig~~~~~~~d~~-----------~----------~--~-~ 170 (281)
T COG1737 122 RAVELLAKAR---RIYFFGLGSSG----LVASDLAYKLMRIGLNVVALSDTH-----------G----------Q--L-M 170 (281)
T ss_pred HHHHHHHcCC---eEEEEEechhH----HHHHHHHHHHHHcCCceeEecchH-----------H----------H--H-H
Confidence 4556777766 67777766643 334446667777888877554311 0 0 1 2
Q ss_pred hHhhhcCCCcceeeeccCch-----hHHHHHhhCCcEEecCCccchhH
Q 047540 259 QEEVLNHPAVGGFFTHSGWN-----STIESLCAGVPMICWPFLGDQAT 301 (388)
Q Consensus 259 q~~~L~~~~~~~~IthgG~~-----s~~eal~~GvP~i~~P~~~DQ~~ 301 (388)
+...+...++-.+|+|.|.. .+..+-..|+|+|.+--..+-+.
T Consensus 171 ~~~~~~~~Dv~i~iS~sG~t~e~i~~a~~ak~~ga~vIaiT~~~~spl 218 (281)
T COG1737 171 QLALLTPGDVVIAISFSGYTREIVEAAELAKERGAKVIAITDSADSPL 218 (281)
T ss_pred HHHhCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEcCCCCCch
Confidence 45566777888899999975 23455678999999876655444
No 241
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=24.31 E-value=1.6e+02 Score=28.70 Aligned_cols=71 Identities=21% Similarity=0.337 Sum_probs=45.4
Q ss_pred cceeeeccCchhHHHHHhh------------C-----CcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHH
Q 047540 268 VGGFFTHSGWNSTIESLCA------------G-----VPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEV 330 (388)
Q Consensus 268 ~~~~IthgG~~s~~eal~~------------G-----vP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l 330 (388)
...++|.||..+.+-|+.+ | .|+|..+-.. |+-..+.. ..+|+|+..-..+++..++.+++
T Consensus 104 ~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~a-H~S~~Kaa-~~lGlg~~~I~~~~~~~md~~~L 181 (373)
T PF00282_consen 104 AGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQA-HYSIEKAA-RILGLGVRKIPTDEDGRMDIEAL 181 (373)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS--THHHHHH-HHTTSEEEEE-BBTTSSB-HHHH
T ss_pred CceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccc-ccHHHHhc-ceeeeEEEEecCCcchhhhHHHh
Confidence 5678999998777666432 3 4566665444 34444444 67899976645555567889999
Q ss_pred HHHHHHHHcC
Q 047540 331 EKLVRELMEG 340 (388)
Q Consensus 331 ~~ai~~vl~~ 340 (388)
+++|.+...+
T Consensus 182 ~~~l~~~~~~ 191 (373)
T PF00282_consen 182 EKALEKDIAN 191 (373)
T ss_dssp HHHHHHHHHT
T ss_pred hhhhcccccc
Confidence 9998876543
No 242
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=23.88 E-value=1.7e+02 Score=24.98 Aligned_cols=31 Identities=19% Similarity=0.312 Sum_probs=22.1
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHHhcCC
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGLVNSN 220 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~ 220 (388)
.+..||+++||......+.+...++.|...+
T Consensus 6 ~~~~v~i~LGSNlg~~~~~l~~A~~~L~~~~ 36 (163)
T PRK14092 6 ASALAYVGLGANLGDAAATLRSVLAELAAAP 36 (163)
T ss_pred cCCEEEEEecCchHhHHHHHHHHHHHHHhCC
Confidence 3568999999976545566777777776643
No 243
>PF01497 Peripla_BP_2: Periplasmic binding protein; InterPro: IPR002491 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). Most bacterial importers employ a periplasmic substrate-binding protein (PBP) that delivers the ligand to the extracellular gate of the TM domains. These proteins bind their substrates selectively and with high affinity, which is thought to ensure the specificity of the transport reaction. Binding proteins in Gram-negative bacteria are present within the periplasm, whereas those in Gram-positive bacteria are tethered to the cell membrane via the acylation of a cysteine residue that is an integral component of a lipoprotein signal sequence. In planta expression of a high-affinity iron-uptake system involving the siderophore chrysobactin in Erwinia chrysanthemi 3937 contributes greatly to invasive growth of this pathogen on its natural host, African violets []. The cobalamin (vitamin B12) and the iron transport systems share many common attributes and probably evolved from the same origin [, ]. The periplasmic-binding domain is composed of two subdomains, each consisting of a central beta-sheet and surrounding alpha-helices, linked by a rigid alpha-helix. The substrate binding site is located in a cleft between the two alpha/beta subdomains [].; GO: 0005488 binding; PDB: 2X4L_A 1N4A_B 1N2Z_B 1N4D_B 4DBL_J 2QI9_F 3EIW_A 3EIX_A 3MWG_A 3MWF_A ....
Probab=23.84 E-value=1.1e+02 Score=27.13 Aligned_cols=42 Identities=19% Similarity=0.294 Sum_probs=27.7
Q ss_pred cHHHHHHHHHhhcCCCCccEEEEcCCc--chHHHHHHHhCCCeEEEccCc
Q 047540 27 LQPFLDLLQKLKSSSNSVSCIISDGFM--PFTVTAAQQLGIPIALFFTIA 74 (388)
Q Consensus 27 ~~~~~~ll~~l~~~~~~~D~iI~D~~~--~~~~~~A~~lgIP~v~~~~~~ 74 (388)
...++.++.- +||+||..... .....-....+||++.+....
T Consensus 50 ~~~~E~i~~l------~PDlIi~~~~~~~~~~~~~~~~~~ip~~~~~~~~ 93 (238)
T PF01497_consen 50 SPNLEAILAL------KPDLIIGSSFYGQSEEIEKLLEAGIPVVVFDSSS 93 (238)
T ss_dssp SB-HHHHHHT--------SEEEEETTSSCHHHHHHHHHTTSEEEEESSTT
T ss_pred CccHHHHHhC------CCCEEEEeccccchHHHHHHhcccceEEEeeccc
Confidence 3455554444 89999998866 445566677899999986655
No 244
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=23.72 E-value=1.7e+02 Score=27.14 Aligned_cols=46 Identities=17% Similarity=0.237 Sum_probs=35.3
Q ss_pred ccHHHHHHHHHhhcCCCCccEEEEcCCcc--hHHHHHHHhCCCeEEEccC
Q 047540 26 MLQPFLDLLQKLKSSSNSVSCIISDGFMP--FTVTAAQQLGIPIALFFTI 73 (388)
Q Consensus 26 ~~~~~~~ll~~l~~~~~~~D~iI~D~~~~--~~~~~A~~lgIP~v~~~~~ 73 (388)
..+.+.++++.+++. +..||++++... .+..+|+..|++++.+.+.
T Consensus 205 s~~~l~~l~~~ik~~--~v~~if~e~~~~~~~~~~la~~~g~~v~~ld~l 252 (282)
T cd01017 205 SPKQLAELVEFVKKS--DVKYIFFEENASSKIAETLAKETGAKLLVLNPL 252 (282)
T ss_pred CHHHHHHHHHHHHHc--CCCEEEEeCCCChHHHHHHHHHcCCcEEEeccc
Confidence 345567777777776 899999999664 4667899999999876543
No 245
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=23.70 E-value=1.2e+02 Score=30.95 Aligned_cols=26 Identities=15% Similarity=0.299 Sum_probs=22.3
Q ss_pred CccEEEEcCCcchHHHHHHHhCCCeEEEc
Q 047540 43 SVSCIISDGFMPFTVTAAQQLGIPIALFF 71 (388)
Q Consensus 43 ~~D~iI~D~~~~~~~~~A~~lgIP~v~~~ 71 (388)
+||+||.+. ....+|+++|||++.+.
T Consensus 364 ~pdliiG~~---~er~~a~~lgip~~~i~ 389 (511)
T TIGR01278 364 EPELVLGTQ---MERHSAKRLDIPCGVIS 389 (511)
T ss_pred CCCEEEECh---HHHHHHHHcCCCEEEec
Confidence 899999887 56788999999998763
No 246
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=23.62 E-value=6.4e+02 Score=26.19 Aligned_cols=28 Identities=21% Similarity=0.274 Sum_probs=22.4
Q ss_pred CcceeeeccCc------hhHHHHHhhCCcEEecC
Q 047540 267 AVGGFFTHSGW------NSTIESLCAGVPMICWP 294 (388)
Q Consensus 267 ~~~~~IthgG~------~s~~eal~~GvP~i~~P 294 (388)
+.+++++|.|- +.+.+|...++|+|++-
T Consensus 63 ~~gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 63 KVGVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred CCEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 34558888873 47899999999999984
No 247
>cd01147 HemV-2 Metal binding protein HemV-2. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=23.51 E-value=1.2e+02 Score=27.43 Aligned_cols=39 Identities=13% Similarity=0.159 Sum_probs=24.8
Q ss_pred HHHHHHHHHhhcCCCCccEEEEcCCcch---HHHHHHHhCCCeEEEcc
Q 047540 28 QPFLDLLQKLKSSSNSVSCIISDGFMPF---TVTAAQQLGIPIALFFT 72 (388)
Q Consensus 28 ~~~~~ll~~l~~~~~~~D~iI~D~~~~~---~~~~A~~lgIP~v~~~~ 72 (388)
+.++.++.- +||+||....... ...+.+.+|||++.+..
T Consensus 65 ~n~E~i~~l------~PDLIi~~~~~~~~~~~~~l~~~~gipvv~~~~ 106 (262)
T cd01147 65 PNYEKIAAL------KPDVVIDVGSDDPTSIADDLQKKTGIPVVVLDG 106 (262)
T ss_pred CCHHHHHhc------CCCEEEEecCCccchhHHHHHHhhCCCEEEEec
Confidence 445555554 9999998764432 12233458999988754
No 248
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=23.44 E-value=2.5e+02 Score=23.64 Aligned_cols=27 Identities=22% Similarity=0.351 Sum_probs=21.1
Q ss_pred cceeeeccCc------hhHHHHHhhCCcEEecC
Q 047540 268 VGGFFTHSGW------NSTIESLCAGVPMICWP 294 (388)
Q Consensus 268 ~~~~IthgG~------~s~~eal~~GvP~i~~P 294 (388)
.+++++|.|- +.+.+|...++|+|++.
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 92 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIV 92 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEe
Confidence 4447777774 35789999999999996
No 249
>cd01143 YvrC Periplasmic binding protein YvrC. These proteins are predicted to function as initial receptors in ABC transport of metal ions in eubacteria and archaea. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.
Probab=23.31 E-value=1.5e+02 Score=25.27 Aligned_cols=39 Identities=10% Similarity=0.143 Sum_probs=25.0
Q ss_pred HHHHHHHHHhhcCCCCccEEEEcCCcch-HHHHHHHhCCCeEEEcc
Q 047540 28 QPFLDLLQKLKSSSNSVSCIISDGFMPF-TVTAAQQLGIPIALFFT 72 (388)
Q Consensus 28 ~~~~~ll~~l~~~~~~~D~iI~D~~~~~-~~~~A~~lgIP~v~~~~ 72 (388)
+.++.++.- +||+||....... ...--++.|+|++.+..
T Consensus 51 ~n~E~l~~l------~PDlii~~~~~~~~~~~~l~~~gi~v~~~~~ 90 (195)
T cd01143 51 PNVEKIVAL------KPDLVIVSSSSLAELLEKLKDAGIPVVVLPA 90 (195)
T ss_pred CCHHHHhcc------CCCEEEEcCCcCHHHHHHHHHcCCcEEEeCC
Confidence 445555444 9999998764332 23344678999888753
No 250
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=23.05 E-value=1.7e+02 Score=29.87 Aligned_cols=81 Identities=7% Similarity=0.018 Sum_probs=41.4
Q ss_pred CCccEEEEcCCc--chHHHHHHHhCCCeEEEccCchhHHHHhhhhcccccCCCCCcccccchhHHHHHHHHHHhhccCCe
Q 047540 42 NSVSCIISDGFM--PFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTLEENTTLTSLIDLNSYATRVAIEAAKNAAKASA 119 (388)
Q Consensus 42 ~~~D~iI~D~~~--~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~ 119 (388)
..||+||..... ..|..+|+++|||.+.+-.+- ....+... .-+...+ ...-.+...+..-.-.|..++.
T Consensus 400 ~~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsL----ek~Ky~~s---~~~w~e~-e~~Yhfs~qftAd~iamn~adf 471 (550)
T PF00862_consen 400 GKPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSL----EKTKYEDS---DLYWKEI-EEKYHFSCQFTADLIAMNAADF 471 (550)
T ss_dssp S--SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-----HHHHHHTT---TTTSHHH-HHHH-HHHHHHHHHHHHHHSSE
T ss_pred CCCcEEEeccCcchHHHHHHHhhcCCceehhhhcc----cccccccc---CCCHHHH-HhhccchhhhhHHHHHhhcCCE
Confidence 489999977533 468888999999998863222 11111000 0000000 0001122333333345778999
Q ss_pred EEEcChhhhhH
Q 047540 120 VVIHTFDALER 130 (388)
Q Consensus 120 ~l~~s~~~le~ 130 (388)
++..|.+|.+.
T Consensus 472 IItST~QEI~g 482 (550)
T PF00862_consen 472 IITSTYQEIAG 482 (550)
T ss_dssp EEESSHHHHHB
T ss_pred EEEcchHhhcC
Confidence 99999988764
No 251
>PRK02910 light-independent protochlorophyllide reductase subunit B; Provisional
Probab=22.91 E-value=1.3e+02 Score=30.79 Aligned_cols=36 Identities=19% Similarity=0.394 Sum_probs=25.8
Q ss_pred HHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEc
Q 047540 31 LDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFF 71 (388)
Q Consensus 31 ~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~ 71 (388)
.++.+.+++. +||+||.+. ....+|+++|||++.+.
T Consensus 352 ~el~~~i~~~--~PdliiG~~---~er~~a~~lgiP~~~i~ 387 (519)
T PRK02910 352 LEVEDAIAEA--APELVLGTQ---MERHSAKRLGIPCAVIS 387 (519)
T ss_pred HHHHHHHHhc--CCCEEEEcc---hHHHHHHHcCCCEEEec
Confidence 3444444333 899999776 56778999999998763
No 252
>TIGR00347 bioD dethiobiotin synthase. Dethiobiotin synthase is involved in biotin biosynthesis and catalyses the reaction (CO2 + 7,8-diaminononanoate + ATP = dethiobiotin + phosphate + ADP). The enzyme binds ATP (see motif in first 12 residues of the SEED alignment) and requires magnesium as a co-factor.
Probab=22.53 E-value=2e+02 Score=23.91 Aligned_cols=40 Identities=18% Similarity=0.266 Sum_probs=28.1
Q ss_pred HHHHHHHHhhcCCCCccEEEEcCCc---------chHHHHHHHhCCCeEEEc
Q 047540 29 PFLDLLQKLKSSSNSVSCIISDGFM---------PFTVTAAQQLGIPIALFF 71 (388)
Q Consensus 29 ~~~~ll~~l~~~~~~~D~iI~D~~~---------~~~~~~A~~lgIP~v~~~ 71 (388)
.+.+.++++. +.+|+||.|... .....++..++.|++.+.
T Consensus 88 ~i~~~~~~l~---~~~D~viid~~g~~~~~~~~~~~~~dl~~~~~~~vilV~ 136 (166)
T TIGR00347 88 ELSKHLRTLE---QKYDFVLVEGAGGLCVPITEEYTTADLIKLLQLPVILVV 136 (166)
T ss_pred HHHHHHHHHH---hcCCEEEEEcCCccccCCCCCCcHHHHHHHhCCCEEEEE
Confidence 3455555553 379999988731 246678899999998875
No 253
>PRK07574 formate dehydrogenase; Provisional
Probab=22.53 E-value=5.5e+02 Score=25.22 Aligned_cols=68 Identities=15% Similarity=0.067 Sum_probs=38.2
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcce
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGG 270 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~ 270 (388)
+.+-.|.+|.++ +.+++.+...+..++.. .... .+...... ..+..+..-.++++.+++
T Consensus 193 ktVGIvG~G~IG-------~~vA~~l~~fG~~V~~~-dr~~-------~~~~~~~~----~g~~~~~~l~ell~~aDv-- 251 (385)
T PRK07574 193 MTVGIVGAGRIG-------LAVLRRLKPFDVKLHYT-DRHR-------LPEEVEQE----LGLTYHVSFDSLVSVCDV-- 251 (385)
T ss_pred CEEEEECCCHHH-------HHHHHHHHhCCCEEEEE-CCCC-------CchhhHhh----cCceecCCHHHHhhcCCE--
Confidence 467888888866 34556666678776543 2211 11111110 012223455678999998
Q ss_pred eeeccCchh
Q 047540 271 FFTHSGWNS 279 (388)
Q Consensus 271 ~IthgG~~s 279 (388)
++.|+-.+.
T Consensus 252 V~l~lPlt~ 260 (385)
T PRK07574 252 VTIHCPLHP 260 (385)
T ss_pred EEEcCCCCH
Confidence 888887654
No 254
>PRK09071 hypothetical protein; Validated
Probab=22.37 E-value=3.3e+02 Score=26.07 Aligned_cols=68 Identities=15% Similarity=0.145 Sum_probs=45.9
Q ss_pred hHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHh
Q 047540 302 NCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPVIKL 381 (388)
Q Consensus 302 na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~~~ 381 (388)
-+..+ +..|-|..- .++++.++.+++++.+|+++-. ..+..|--+.-.+| |.+.+++.-+++.+.+.
T Consensus 4 ~~~~i-k~vg~gk~~-----~~~Lt~eEa~~~~~~il~g~~~-~~q~aAfL~alr~k------geT~eEi~g~~~a~r~~ 70 (323)
T PRK09071 4 FAEYI-RILGKGKRG-----RRSLTREEARQAMGMILDGEVE-DDQLGAFLMLLRVK------EETAEELAGFVEAIRER 70 (323)
T ss_pred HHHHH-HHHcCCCCC-----CCCCCHHHHHHHHHHHHcCCCC-HHHHHHHHHHHHHc------CCCHHHHHHHHHHHHHh
Confidence 34555 566666665 5789999999999999987620 13433333333444 78888888888887766
Q ss_pred h
Q 047540 382 I 382 (388)
Q Consensus 382 ~ 382 (388)
.
T Consensus 71 ~ 71 (323)
T PRK09071 71 L 71 (323)
T ss_pred c
Confidence 4
No 255
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=22.36 E-value=80 Score=27.01 Aligned_cols=28 Identities=21% Similarity=0.325 Sum_probs=19.6
Q ss_pred HHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCc
Q 047540 305 YTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGE 341 (388)
Q Consensus 305 ~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~ 341 (388)
-..++.|+|+.+ |+++|.++|.++++..
T Consensus 106 ~Fe~~cGVGV~V---------T~E~I~~~V~~~i~~~ 133 (164)
T PF04558_consen 106 EFEKACGVGVVV---------TPEQIEAAVEKYIEEN 133 (164)
T ss_dssp HHHHTTTTT-------------HHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCeEE---------CHHHHHHHHHHHHHHh
Confidence 334778999987 8999999999998754
No 256
>cd01980 Chlide_reductase_Y Chlide_reductase_Y : Y subunit of chlorophyllide (chlide) reductase (BchY). Chlide reductase participates in photosynthetic pigment synthesis playing a role in the conversion of chlorophylls(Chl) into bacteriochlorophylls (BChl). Chlide reductase catalyzes the reduction of the B-ring of the tetrapyrolle. Chlide reductase is a three subunit enzyme (subunits are designated BchX, BchY and BchZ). The similarity between these three subunits and the subunits for nitrogenase suggests that BchX serves as an electron donor for the BchY-BchY catalytic subunits.
Probab=22.28 E-value=1.4e+02 Score=29.66 Aligned_cols=26 Identities=23% Similarity=0.235 Sum_probs=21.9
Q ss_pred CccEEEEcCCcchHHHHHHHhCCCeEEEc
Q 047540 43 SVSCIISDGFMPFTVTAAQQLGIPIALFF 71 (388)
Q Consensus 43 ~~D~iI~D~~~~~~~~~A~~lgIP~v~~~ 71 (388)
+||++|... -+..+|+++|||.+.+.
T Consensus 350 ~pDl~Ig~s---~~~~~a~~~giP~~r~~ 375 (416)
T cd01980 350 RPDLAIGTT---PLVQYAKEKGIPALYYT 375 (416)
T ss_pred CCCEEEeCC---hhhHHHHHhCCCEEEec
Confidence 999999874 46788999999998763
No 257
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=22.15 E-value=1.3e+02 Score=24.23 Aligned_cols=37 Identities=14% Similarity=0.350 Sum_probs=26.5
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhc--CCCCEEEEEc
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVN--SNHPFLWIIR 228 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~--~~~~~iw~~~ 228 (388)
.+++++|||......+.+..+.+.+++ .+..|-|...
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 689999999876444567778888754 3457777765
No 258
>PRK06270 homoserine dehydrogenase; Provisional
Probab=22.13 E-value=6.9e+02 Score=23.91 Aligned_cols=58 Identities=14% Similarity=0.114 Sum_probs=34.7
Q ss_pred ChHhhhcCCCcceeee------ccC---chhHHHHHhhCCcEEe---cCCccchhHhHHHHhhhhceeEEe
Q 047540 258 PQEEVLNHPAVGGFFT------HSG---WNSTIESLCAGVPMIC---WPFLGDQATNCRYTCNEWGVGMDI 316 (388)
Q Consensus 258 pq~~~L~~~~~~~~It------hgG---~~s~~eal~~GvP~i~---~P~~~DQ~~na~~v~~~~G~G~~l 316 (388)
+-.++|..+++.+||- |+| ..-+.+++.+|+++|+ -|+...-..- ..++++.|..+..
T Consensus 80 d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK~pla~~~~eL-~~~A~~~g~~~~~ 149 (341)
T PRK06270 80 SGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNKGPLALAYKEL-KELAKKNGVRFRY 149 (341)
T ss_pred CHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCcHHHHhhHHHH-HHHHHHcCCEEEE
Confidence 4456776655555665 433 3345899999999999 4764422222 2223556776665
No 259
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=22.09 E-value=1.2e+02 Score=28.11 Aligned_cols=25 Identities=20% Similarity=0.367 Sum_probs=20.8
Q ss_pred eeeccCc-hhHHHHHhhCCcEEecCC
Q 047540 271 FFTHSGW-NSTIESLCAGVPMICWPF 295 (388)
Q Consensus 271 ~IthgG~-~s~~eal~~GvP~i~~P~ 295 (388)
-|+++|- +..+|+..+|+|.|.+-+
T Consensus 108 dv~ySGTVgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 108 NTLYSGTVAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred CEecchhHHHHHHHHHcCCCeEEEEc
Confidence 5566664 788999999999999887
No 260
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=22.04 E-value=1.7e+02 Score=27.49 Aligned_cols=54 Identities=9% Similarity=0.132 Sum_probs=36.8
Q ss_pred CCCcceeeeccCchhHHHHHh----hCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 265 HPAVGGFFTHSGWNSTIESLC----AGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 265 ~~~~~~~IthgG~~s~~eal~----~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
.+++ +|+=||-||++.++. +++|++.+-.. .+ |..- .++.+++.+++++++++
T Consensus 63 ~~d~--vi~lGGDGT~L~aa~~~~~~~~Pilgin~G------------~l--GFl~-------~~~~~~~~~~l~~i~~g 119 (292)
T PRK03378 63 QADL--AIVVGGDGNMLGAARVLARYDIKVIGINRG------------NL--GFLT-------DLDPDNALQQLSDVLEG 119 (292)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcCCCCeEEEEECC------------CC--Cccc-------ccCHHHHHHHHHHHHcC
Confidence 4555 999999999999975 36777766531 12 2222 35577888888888865
Q ss_pred c
Q 047540 341 E 341 (388)
Q Consensus 341 ~ 341 (388)
.
T Consensus 120 ~ 120 (292)
T PRK03378 120 H 120 (292)
T ss_pred C
Confidence 4
No 261
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=21.97 E-value=1.2e+02 Score=27.88 Aligned_cols=53 Identities=11% Similarity=0.265 Sum_probs=35.4
Q ss_pred CCcceeeeccCchhHHHHHh-hCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCc
Q 047540 266 PAVGGFFTHSGWNSTIESLC-AGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGE 341 (388)
Q Consensus 266 ~~~~~~IthgG~~s~~eal~-~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~ 341 (388)
+++ +|+=||-||++.++. +++|++.+-.. . .|... .++.+++.+++.++++++
T Consensus 42 ~d~--vi~iGGDGT~L~a~~~~~~Pilgin~G------------~--lGfl~-------~~~~~~~~~~l~~~~~g~ 95 (256)
T PRK14075 42 ADL--IIVVGGDGTVLKAAKKVGTPLVGFKAG------------R--LGFLS-------SYTLEEIDRFLEDLKNWN 95 (256)
T ss_pred CCE--EEEECCcHHHHHHHHHcCCCEEEEeCC------------C--Ccccc-------ccCHHHHHHHHHHHHcCC
Confidence 455 999999999998876 47777665521 1 22232 356677777887777654
No 262
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated
Probab=21.97 E-value=2.2e+02 Score=29.42 Aligned_cols=27 Identities=30% Similarity=0.358 Sum_probs=21.6
Q ss_pred cceeeeccCc------hhHHHHHhhCCcEEecC
Q 047540 268 VGGFFTHSGW------NSTIESLCAGVPMICWP 294 (388)
Q Consensus 268 ~~~~IthgG~------~s~~eal~~GvP~i~~P 294 (388)
.+++++|.|- +.+.||-..++|+|++.
T Consensus 73 ~~v~~vt~GpG~~N~l~~i~~A~~~~~Pvl~Is 105 (568)
T PRK07449 73 PVAVIVTSGTAVANLYPAVIEAGLTGVPLIVLT 105 (568)
T ss_pred CEEEEECCccHHHhhhHHHHHHhhcCCcEEEEE
Confidence 3348888884 46899999999999994
No 263
>PRK09219 xanthine phosphoribosyltransferase; Validated
Probab=21.85 E-value=1.4e+02 Score=26.12 Aligned_cols=29 Identities=24% Similarity=0.345 Sum_probs=22.9
Q ss_pred CccEEEEcCC--cchHHHHHHHhCCCeEEEc
Q 047540 43 SVSCIISDGF--MPFTVTAAQQLGIPIALFF 71 (388)
Q Consensus 43 ~~D~iI~D~~--~~~~~~~A~~lgIP~v~~~ 71 (388)
++|+|+.=.. .+.|..+|..+|+|.+.+-
T Consensus 50 ~~D~Ivg~e~~GiplA~~lA~~Lg~p~v~vR 80 (189)
T PRK09219 50 GITKILTIEASGIAPAVMAALALGVPVVFAK 80 (189)
T ss_pred CCCEEEEEccccHHHHHHHHHHHCCCEEEEE
Confidence 7899986442 3578889999999998873
No 264
>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent. In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.
Probab=21.81 E-value=2.1e+02 Score=24.96 Aligned_cols=43 Identities=23% Similarity=0.312 Sum_probs=29.2
Q ss_pred HHHHHHHHHhhcCCC--CccEEEEcCCcchHHHHHHHhCCCeEEE
Q 047540 28 QPFLDLLQKLKSSSN--SVSCIISDGFMPFTVTAAQQLGIPIALF 70 (388)
Q Consensus 28 ~~~~~ll~~l~~~~~--~~D~iI~D~~~~~~~~~A~~lgIP~v~~ 70 (388)
..++.+++.+...+. .+-+||+|.-...+...|+..|||++.+
T Consensus 12 s~~~~ll~~~~~~~l~~~I~~vi~~~~~~~~~~~A~~~gip~~~~ 56 (190)
T TIGR00639 12 SNLQAIIDACKEGKIPASVVLVISNKPDAYGLERAAQAGIPTFVL 56 (190)
T ss_pred hhHHHHHHHHHcCCCCceEEEEEECCccchHHHHHHHcCCCEEEE
Confidence 455666666654422 4556678865555678899999998875
No 265
>TIGR02015 BchY chlorophyllide reductase subunit Y. This model represents the Y subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase.
Probab=21.79 E-value=1.3e+02 Score=30.09 Aligned_cols=34 Identities=21% Similarity=0.176 Sum_probs=25.2
Q ss_pred HHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEc
Q 047540 33 LLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFF 71 (388)
Q Consensus 33 ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~ 71 (388)
.++.+++. +||++|... -+..+|+++|||.+.+.
T Consensus 347 ~~~~l~~~--~pDllig~s---~~~~~A~k~gIP~vr~g 380 (422)
T TIGR02015 347 DMEAVLEF--EPDLAIGTT---PLVQFAKEHGIPALYFT 380 (422)
T ss_pred HHHHHhhC--CCCEEEcCC---cchHHHHHcCCCEEEec
Confidence 33444443 999999884 35678999999998863
No 266
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=21.76 E-value=1.6e+02 Score=30.59 Aligned_cols=53 Identities=17% Similarity=0.363 Sum_probs=37.0
Q ss_pred cceeeeccCchhHHHHHhh----CCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCc
Q 047540 268 VGGFFTHSGWNSTIESLCA----GVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGE 341 (388)
Q Consensus 268 ~~~~IthgG~~s~~eal~~----GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~ 341 (388)
+.++|+-||-||++.+... ++|++++-.. .+|. . ..++.+++.++|.++++++
T Consensus 349 ~dlvi~lGGDGT~L~aa~~~~~~~~PilGin~G------------~lGF--L-------~~~~~~~~~~~l~~~~~g~ 405 (569)
T PRK14076 349 ISHIISIGGDGTVLRASKLVNGEEIPIICINMG------------TVGF--L-------TEFSKEEIFKAIDSIISGE 405 (569)
T ss_pred CCEEEEECCcHHHHHHHHHhcCCCCCEEEEcCC------------CCCc--C-------cccCHHHHHHHHHHHHcCC
Confidence 3459999999999998763 7788776531 1222 2 2366778888888888764
No 267
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=21.74 E-value=1.1e+02 Score=29.46 Aligned_cols=34 Identities=24% Similarity=0.341 Sum_probs=24.2
Q ss_pred CCccEEEE-cCC-cchHHHHHHHhCCCeEEEccCch
Q 047540 42 NSVSCIIS-DGF-MPFTVTAAQQLGIPIALFFTIAA 75 (388)
Q Consensus 42 ~~~D~iI~-D~~-~~~~~~~A~~lgIP~v~~~~~~~ 75 (388)
+.||+||+ |+. ...+..=|.++|||+|.+.-+.+
T Consensus 151 ~~Pd~viv~d~~~e~~AI~EA~kl~IPvIaivDTn~ 186 (326)
T PRK12311 151 GLPDLLFVIDTNKEDIAIQEAQRLGIPVAAIVDTNC 186 (326)
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEeeCCC
Confidence 46887765 553 35677789999999999854443
No 268
>PRK11380 hypothetical protein; Provisional
Probab=21.61 E-value=2.2e+02 Score=27.35 Aligned_cols=74 Identities=20% Similarity=0.336 Sum_probs=41.0
Q ss_pred hHhhhcCCCcceeeeccCchhHHHH------------HhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCC
Q 047540 259 QEEVLNHPAVGGFFTHSGWNSTIES------------LCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVG 326 (388)
Q Consensus 259 q~~~L~~~~~~~~IthgG~~s~~ea------------l~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~ 326 (388)
|...|.-.++ .-.-||||..++|. -+++.|++..++ -+... ..+.+.+|+ .+
T Consensus 117 q~r~L~L~aV-ya~~~g~~~etLet~p~~~~~g~~~~~~~~lp~~~~~i-~~er~--~~L~~~WGI------------~d 180 (353)
T PRK11380 117 KRQALQLIAV-YRFYHGQWSETLEFWPRKPRPGKDTFQYHVLPFDSIDI-ISKRR--ESLEDDWGI------------ED 180 (353)
T ss_pred HHHHHHHhhH-HHHHhhhhhhhhhccccccccccccccccccccccccc-hhhhH--HHHHhccCC------------CC
Confidence 4444443333 13456777777666 456666666665 22222 122233333 57
Q ss_pred HHHHHHHHHHHHcCchHHHHHH
Q 047540 327 RNEVEKLVRELMEGEKGMQMRN 348 (388)
Q Consensus 327 ~~~l~~ai~~vl~~~~~~~~~~ 348 (388)
.|+..+.|..++++..+..+-.
T Consensus 181 rEsai~tL~~L~~~GH~A~~f~ 202 (353)
T PRK11380 181 SEGYCALMEHLLSGDHGANTFK 202 (353)
T ss_pred HHHHHHHHHHHHhCCchhhhHH
Confidence 7889999999888775333333
No 269
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=21.50 E-value=1.6e+02 Score=26.97 Aligned_cols=38 Identities=29% Similarity=0.598 Sum_probs=26.0
Q ss_pred HHHHHHHHHhhcCCCCccEEEEcCCcch-------HHHHHHHhCCCeEEEc
Q 047540 28 QPFLDLLQKLKSSSNSVSCIISDGFMPF-------TVTAAQQLGIPIALFF 71 (388)
Q Consensus 28 ~~~~~ll~~l~~~~~~~D~iI~D~~~~~-------~~~~A~~lgIP~v~~~ 71 (388)
..+.+++++- ++++|| |...|+ +..+|+.+|||++-|-
T Consensus 56 ~~l~~~l~~~-----~i~~vI-DATHPfA~~is~na~~a~~~~~ipylR~e 100 (249)
T PF02571_consen 56 EGLAEFLREN-----GIDAVI-DATHPFAAEISQNAIEACRELGIPYLRFE 100 (249)
T ss_pred HHHHHHHHhC-----CCcEEE-ECCCchHHHHHHHHHHHHhhcCcceEEEE
Confidence 4455555552 888766 776665 4456889999998874
No 270
>PF02016 Peptidase_S66: LD-carboxypeptidase; InterPro: IPR003507 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This signature is found in the Escherichia coli microcin C7 self-immunity protein mccF and in muramoyltetrapeptide carboxypeptidase (3.4.17.13 from EC, LD-carboxypeptidase A). LD-carboxypeptidase A belongs to MEROPS peptidase family S66 (clan SS). The entry also contains uncharacterised proteins including hypothetical proteins from various bacteria archaea.; PDB: 1ZRS_A 1ZL0_B 2AUM_B 2AUN_B 3TLG_A 3TLC_A 3TLZ_B 3TLY_B 3TLE_A 3TLB_B ....
Probab=21.24 E-value=1.3e+02 Score=28.25 Aligned_cols=75 Identities=13% Similarity=0.261 Sum_probs=52.1
Q ss_pred cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHH
Q 047540 203 YLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIE 282 (388)
Q Consensus 203 ~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~e 282 (388)
..+++....+.+++.+.....||..++.. ...++.++++...+-.+|+. ||-.+-..+++-
T Consensus 45 gs~~~Ra~dL~~a~~d~~i~aI~~~rGGy-----------------g~~rlL~~ld~~~i~~~pK~--~iGySDiTaL~~ 105 (284)
T PF02016_consen 45 GSDEERAEDLNEAFADPEIDAIWCARGGY-----------------GANRLLPYLDYDAIRKNPKI--FIGYSDITALHN 105 (284)
T ss_dssp S-HHHHHHHHHHHHHSTTEEEEEES--SS------------------GGGGGGGCHHHHHHHSG-E--EEE-GGGHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCCCEEEEeeccc-----------------cHHHHHhcccccccccCCCE--EEEecchHHHHH
Confidence 34567789999999999999999887652 13467777887778888887 998888888777
Q ss_pred HHhh--CCcEEecCCc
Q 047540 283 SLCA--GVPMICWPFL 296 (388)
Q Consensus 283 al~~--GvP~i~~P~~ 296 (388)
+++. |.+.+.=|+.
T Consensus 106 al~~~~g~~t~hGp~~ 121 (284)
T PF02016_consen 106 ALYAKTGLVTFHGPML 121 (284)
T ss_dssp HHHHHHTBEEEES--H
T ss_pred HHHHhCCCeEEEcchh
Confidence 7553 7777777763
No 271
>PRK10353 3-methyl-adenine DNA glycosylase I; Provisional
Probab=21.16 E-value=2.7e+02 Score=24.39 Aligned_cols=81 Identities=10% Similarity=-0.010 Sum_probs=43.1
Q ss_pred ecCCccchhHhHHHHhhhhceeEEeeecC-C-----C--CCCCHHHHH----HHHHHHHcCchHHHHHHHHHHHHHHHHH
Q 047540 292 CWPFLGDQATNCRYTCNEWGVGMDITNSG-D-----D--NQVGRNEVE----KLVRELMEGEKGMQMRNKASEWKRFAEE 359 (388)
Q Consensus 292 ~~P~~~DQ~~na~~v~~~~G~G~~l~~~~-~-----~--~~~~~~~l~----~ai~~vl~~~~~~~~~~~a~~l~~~~~~ 359 (388)
+.|.+.||..--..+-|-..+|+....-- | . ..++.+.++ +.|.++|.|+. +-+|-.++...+..
T Consensus 22 G~P~~dd~~LFE~L~Le~~QAGLSW~tIL~Kre~fr~aF~~Fd~~~VA~~~e~die~Ll~d~~---IIRnr~KI~Avi~N 98 (187)
T PRK10353 22 GVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDAG---IIRHRGKIQAIIGN 98 (187)
T ss_pred CCcCCCcHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHcCCCHHHHhCCCHHHHHHHhcCch---hHHhHHHHHHHHHH
Confidence 45567888887766557777777541110 0 0 144445544 55667777776 44444444333332
Q ss_pred H------hCCCCChHHHHHHHH
Q 047540 360 A------AAPDGSSATNLEKLE 375 (388)
Q Consensus 360 ~------~~~gg~s~~~~~~~v 375 (388)
| .+++||-...+..++
T Consensus 99 A~~~l~i~~e~gSf~~ylW~fv 120 (187)
T PRK10353 99 ARAYLQMEQNGEPFADFVWSFV 120 (187)
T ss_pred HHHHHHHHHhcCCHHHHHhhcc
Confidence 2 134676666665553
No 272
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=20.92 E-value=81 Score=29.46 Aligned_cols=26 Identities=8% Similarity=0.107 Sum_probs=21.0
Q ss_pred eeeeccCchhHHHHHh---hCCcEEecCC
Q 047540 270 GFFTHSGWNSTIESLC---AGVPMICWPF 295 (388)
Q Consensus 270 ~~IthgG~~s~~eal~---~GvP~i~~P~ 295 (388)
++|+-||-||+++++. .++|++++|.
T Consensus 60 ~vi~iGGDGTlL~a~~~~~~~~pi~gIn~ 88 (277)
T PRK03708 60 FIIAIGGDGTILRIEHKTKKDIPILGINM 88 (277)
T ss_pred EEEEEeCcHHHHHHHHhcCCCCeEEEEeC
Confidence 4999999999999874 3568887774
No 273
>PLN02859 glutamine-tRNA ligase
Probab=20.86 E-value=1.8e+02 Score=31.45 Aligned_cols=68 Identities=16% Similarity=0.165 Sum_probs=41.9
Q ss_pred HhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCchH----HHHHHHHHHHHHHHHHHh--CCCCChHHHHHHH
Q 047540 301 TNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEKG----MQMRNKASEWKRFAEEAA--APDGSSATNLEKL 374 (388)
Q Consensus 301 ~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~----~~~~~~a~~l~~~~~~~~--~~gg~s~~~~~~~ 374 (388)
.+.....++.|+|+.+ |.+++.++|.+++++.+. +.|+.|.-.+-..+|+.+ .++..-...+++.
T Consensus 104 ~d~~~Fek~CGVGV~V---------T~EqI~~~V~~~i~~~k~~il~~RY~~n~g~ll~~~r~~Lkwad~~~~k~~id~~ 174 (788)
T PLN02859 104 FDLNKFEEACGVGVVV---------SPEDIEAAVNEVFEENKEKILEQRYRTNVGDLLGQVRKRLPWADPKIVKKLIDKK 174 (788)
T ss_pred cCHHHHHHhCCCCEEE---------CHHHHHHHHHHHHHhhHHHHHHhcccccHHHHHHHHHhhCCCCCHHHHHHHHHHH
Confidence 3334444778999988 889999999999875421 247776666666666542 2333333444444
Q ss_pred HHH
Q 047540 375 EQP 377 (388)
Q Consensus 375 v~~ 377 (388)
+-.
T Consensus 175 ~~~ 177 (788)
T PLN02859 175 LYE 177 (788)
T ss_pred HHH
Confidence 333
No 274
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=20.83 E-value=1.9e+02 Score=26.52 Aligned_cols=39 Identities=23% Similarity=0.460 Sum_probs=27.2
Q ss_pred HHHHHHHHHhhcCCCCccEEEEcCCcch-------HHHHHHHhCCCeEEEcc
Q 047540 28 QPFLDLLQKLKSSSNSVSCIISDGFMPF-------TVTAAQQLGIPIALFFT 72 (388)
Q Consensus 28 ~~~~~ll~~l~~~~~~~D~iI~D~~~~~-------~~~~A~~lgIP~v~~~~ 72 (388)
..+.+++++ +++++|| |...++ +..+|+++|||++-|--
T Consensus 55 ~~l~~~l~~-----~~i~~VI-DATHPfA~~is~~a~~ac~~~~ipyiR~eR 100 (248)
T PRK08057 55 EGLAAYLRE-----EGIDLVI-DATHPYAAQISANAAAACRALGIPYLRLER 100 (248)
T ss_pred HHHHHHHHH-----CCCCEEE-ECCCccHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 445555555 2888755 776665 45668999999999843
No 275
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=20.57 E-value=60 Score=26.79 Aligned_cols=39 Identities=21% Similarity=0.308 Sum_probs=28.3
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHh-----cCCCCEEEEEcCC
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLV-----NSNHPFLWIIRPD 230 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~-----~~~~~~iw~~~~~ 230 (388)
.+|+|+.|+........+..++.... .....++|+++..
T Consensus 3 ~vvlvAGG~GIt~~l~~l~~l~~~~~~~~~~~~~i~lvW~vR~~ 46 (156)
T PF08030_consen 3 NVVLVAGGSGITPILPILRDLLQRQNRGSSRTRRIKLVWVVRDA 46 (156)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHHHHTT-----EEEEEEEES-T
T ss_pred EEEEEecCcCHHHHHHHHHHHHHhhccccccccceEEEEeeCch
Confidence 58999999987666677777777766 2336899999854
No 276
>COG2521 Predicted archaeal methyltransferase [General function prediction only]
Probab=20.26 E-value=91 Score=28.49 Aligned_cols=23 Identities=22% Similarity=0.374 Sum_probs=18.3
Q ss_pred cHHHHHHHHHhhcCCCCccEEEEcC
Q 047540 27 LQPFLDLLQKLKSSSNSVSCIISDG 51 (388)
Q Consensus 27 ~~~~~~ll~~l~~~~~~~D~iI~D~ 51 (388)
.-...++++++.++ .+|+||.|+
T Consensus 191 lGD~~e~V~~~~D~--sfDaIiHDP 213 (287)
T COG2521 191 LGDAYEVVKDFDDE--SFDAIIHDP 213 (287)
T ss_pred cccHHHHHhcCCcc--ccceEeeCC
Confidence 34456778888877 999999999
No 277
>PF09547 Spore_IV_A: Stage IV sporulation protein A (spore_IV_A); InterPro: IPR014201 This entry is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis []. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species.
Probab=20.24 E-value=3.2e+02 Score=27.42 Aligned_cols=73 Identities=15% Similarity=0.285 Sum_probs=56.7
Q ss_pred hhcCCCcceeeeccCch--------------hHHHHHhhCCcEEec-----CCccchhHhHHHHhhhhceeEEeeecCCC
Q 047540 262 VLNHPAVGGFFTHSGWN--------------STIESLCAGVPMICW-----PFLGDQATNCRYTCNEWGVGMDITNSGDD 322 (388)
Q Consensus 262 ~L~~~~~~~~IthgG~~--------------s~~eal~~GvP~i~~-----P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 322 (388)
|-.|+-++++||--|.- ++.|--.-|+|.|++ |+..+-..=+..+.++.++-+..- +
T Consensus 141 I~dHSTIGiVVTTDGSi~dipRe~Y~eAEervI~ELk~igKPFvillNs~~P~s~et~~L~~eL~ekY~vpVlpv----n 216 (492)
T PF09547_consen 141 ITDHSTIGIVVTTDGSITDIPRENYVEAEERVIEELKEIGKPFVILLNSTKPYSEETQELAEELEEKYDVPVLPV----N 216 (492)
T ss_pred eccCCceeEEEecCCCccCCChHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCCCHHHHHHHHHHHHHhCCcEEEe----e
Confidence 44689999999998852 567778899998875 555565556667778888877652 4
Q ss_pred -CCCCHHHHHHHHHHHH
Q 047540 323 -NQVGRNEVEKLVRELM 338 (388)
Q Consensus 323 -~~~~~~~l~~ai~~vl 338 (388)
..++.++|...++++|
T Consensus 217 c~~l~~~DI~~Il~~vL 233 (492)
T PF09547_consen 217 CEQLREEDITRILEEVL 233 (492)
T ss_pred hHHcCHHHHHHHHHHHH
Confidence 5899999999999987
No 278
>TIGR01285 nifN nitrogenase molybdenum-iron cofactor biosynthesis protein NifN. This protein forms a complex with NifE, and appears as a NifEN in some species. NifEN is a required for producing the molybdenum-iron cofactor of molybdenum-requiring nitrogenases. NifN is closely related to the nitrogenase molybdenum-iron protein beta chain NifK. This model describes most examples of NifN but excludes some cases, such as the putative NifN of Chlorobium tepidum, for which a separate model may be created.
Probab=20.16 E-value=1.6e+02 Score=29.51 Aligned_cols=25 Identities=20% Similarity=0.355 Sum_probs=21.5
Q ss_pred CccEEEEcCCcchHHHHHHHhCCCeEEE
Q 047540 43 SVSCIISDGFMPFTVTAAQQLGIPIALF 70 (388)
Q Consensus 43 ~~D~iI~D~~~~~~~~~A~~lgIP~v~~ 70 (388)
++|+||... .+..+|+++|||.+-+
T Consensus 373 ~~dliig~s---~~k~~A~~l~ip~ir~ 397 (432)
T TIGR01285 373 GADLLITNS---HGRALAQRLALPLVRA 397 (432)
T ss_pred CCCEEEECc---chHHHHHHcCCCEEEe
Confidence 899999886 4578999999999865
No 279
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=20.12 E-value=1.7e+02 Score=30.14 Aligned_cols=43 Identities=12% Similarity=0.308 Sum_probs=35.2
Q ss_pred ccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccC
Q 047540 26 MLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTI 73 (388)
Q Consensus 26 ~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~ 73 (388)
.....+..++++++. ++++||.|. -+..+|+++|++.+.+.+.
T Consensus 130 ~~~e~~~~~~~l~~~--G~~~viG~~---~~~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 130 TEEDARSCVNDLRAR--GIGAVVGAG---LITDLAEQAGLHGVFLYSA 172 (526)
T ss_pred CHHHHHHHHHHHHHC--CCCEEECCh---HHHHHHHHcCCceEEEecH
Confidence 445677888888877 999999997 3568999999999988654
No 280
>TIGR03837 efp_adjacent_2 conserved hypothetical protein, PP_1857 family. This model describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=20.08 E-value=2.1e+02 Score=27.92 Aligned_cols=89 Identities=17% Similarity=0.247 Sum_probs=54.8
Q ss_pred ccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCC-CCCc------hhHHHhhhcCcccccccChHh---hhcCCCccee
Q 047540 202 VYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGET-ADMP------SEFEVKAKETGFIARWCPQEE---VLNHPAVGGF 271 (388)
Q Consensus 202 ~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~-~~~~------~~~~~~~~~~~~v~~~~pq~~---~L~~~~~~~~ 271 (388)
.......+..+++++++.+.++...+......... .-++ .....+-.-.+.+.++++|.+ +|-.+++ .|
T Consensus 188 F~Ye~~al~~ll~~~~~~~~pv~lLvp~Gr~~~~v~~~l~~~~~~~g~~~~~g~L~~~~LPf~~Q~~yD~LLW~cD~-Nf 266 (371)
T TIGR03837 188 FCYENAALPALLDALAQSGSPVHLLVPEGRALAAVAAWLGDALLAAGDVHRRGALTVAVLPFVPQDDYDRLLWACDL-NF 266 (371)
T ss_pred EecCChhHHHHHHHHHhCCCCeEEEecCCccHHHHHHHhCccccCCccccccCceEEEEcCCCChhhHHHHHHhChh-cE
Confidence 34556678889999998888777666543321100 0010 100011111234588999864 8988887 23
Q ss_pred eeccCchhHHHHHhhCCcEEec
Q 047540 272 FTHSGWNSTIESLCAGVPMICW 293 (388)
Q Consensus 272 IthgG~~s~~eal~~GvP~i~~ 293 (388)
| + |--|...|.-+|+|+|=-
T Consensus 267 V-R-GEDSFVRAqWAgkPfvWh 286 (371)
T TIGR03837 267 V-R-GEDSFVRAQWAGKPFVWH 286 (371)
T ss_pred e-e-chhHHHHHHHcCCCceee
Confidence 3 3 778999999999999753
No 281
>COG1515 Nfi Deoxyinosine 3'endonuclease (endonuclease V) [DNA replication, recombination, and repair]
Probab=20.00 E-value=72 Score=28.44 Aligned_cols=43 Identities=19% Similarity=0.180 Sum_probs=25.1
Q ss_pred HHHHHHHHHhhcCCCCccEEEEcCCcc-------hHHHHHHHhCCCeEEE
Q 047540 28 QPFLDLLQKLKSSSNSVSCIISDGFMP-------FTVTAAQQLGIPIALF 70 (388)
Q Consensus 28 ~~~~~ll~~l~~~~~~~D~iI~D~~~~-------~~~~~A~~lgIP~v~~ 70 (388)
..++.+|+.++.-..+||+|++|..-. ++..++=.+++|+|.+
T Consensus 80 RE~p~~l~a~~~l~~~~d~ilVDG~GiaHPR~~GlAsH~Gv~l~~PtIGV 129 (212)
T COG1515 80 RELPLLLKALEKLSVKPDLLLVDGHGIAHPRRLGLASHIGVLLDVPTIGV 129 (212)
T ss_pred hhhHHHHHHHHhcCCCCCEEEEcCcceecCcccChhheeeeeeCCCceeE
Confidence 555555555544445899999998632 2333344455555554
Done!