Query 047540
Match_columns 388
No_of_seqs 163 out of 1598
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 21:16:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047540.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047540hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2.4E-59 8.2E-64 464.2 32.9 350 1-379 77-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.5E-54 5E-59 435.9 35.6 357 11-380 85-479 (482)
3 2c1x_A UDP-glucose flavonoid 3 100.0 4.1E-53 1.4E-57 422.1 32.9 350 1-379 72-451 (456)
4 2vch_A Hydroquinone glucosyltr 100.0 1.3E-51 4.6E-56 413.7 37.7 350 13-381 81-470 (480)
5 2acv_A Triterpene UDP-glucosyl 100.0 2.6E-49 9.1E-54 395.4 35.2 335 21-379 95-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 2.1E-33 7.2E-38 277.1 28.1 296 13-359 82-405 (424)
7 1iir_A Glycosyltransferase GTF 100.0 5.9E-32 2E-36 266.2 22.0 279 42-379 92-399 (415)
8 4amg_A Snogd; transferase, pol 100.0 8.7E-32 3E-36 262.8 19.8 154 181-359 228-384 (400)
9 1rrv_A Glycosyltransferase GTF 100.0 7.9E-31 2.7E-35 258.2 23.0 275 31-358 82-384 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 3.2E-30 1.1E-34 253.1 19.9 259 43-358 92-366 (404)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 1.3E-28 4.4E-33 241.8 27.3 278 27-359 104-397 (415)
12 2p6p_A Glycosyl transferase; X 100.0 2.2E-28 7.4E-33 237.8 23.5 257 29-359 95-363 (384)
13 3ia7_A CALG4; glycosysltransfe 100.0 7.3E-28 2.5E-32 234.8 26.8 290 13-358 74-381 (402)
14 2yjn_A ERYCIII, glycosyltransf 100.0 1.4E-28 4.8E-33 244.0 21.1 274 29-358 132-418 (441)
15 2iyf_A OLED, oleandomycin glyc 100.0 1.4E-27 4.7E-32 235.7 25.5 292 13-359 77-383 (430)
16 2o6l_A UDP-glucuronosyltransfe 99.9 3E-26 1E-30 197.7 16.7 160 177-358 8-169 (170)
17 4fzr_A SSFS6; structural genom 99.9 2.6E-25 9E-30 217.2 21.2 157 181-358 218-383 (398)
18 3oti_A CALG3; calicheamicin, T 99.9 2.6E-24 9E-29 210.2 20.3 153 182-359 224-381 (398)
19 3tsa_A SPNG, NDP-rhamnosyltran 99.9 1.7E-23 5.8E-28 203.7 24.6 155 182-358 210-371 (391)
20 3otg_A CALG1; calicheamicin, T 99.9 1E-21 3.5E-26 192.1 29.4 151 190-359 241-392 (412)
21 3s2u_A UDP-N-acetylglucosamine 99.8 1.6E-17 5.5E-22 160.5 22.2 136 190-342 179-326 (365)
22 2jzc_A UDP-N-acetylglucosamine 99.6 6.8E-15 2.3E-19 131.4 9.6 130 190-337 27-196 (224)
23 1f0k_A MURG, UDP-N-acetylgluco 99.4 6.9E-12 2.4E-16 119.9 19.1 133 190-342 182-325 (364)
24 3hbm_A UDP-sugar hydrolase; PS 99.0 9.1E-10 3.1E-14 101.9 10.2 113 191-316 157-272 (282)
25 3dzc_A UDP-N-acetylglucosamine 98.8 6E-08 2.1E-12 94.3 16.5 130 191-342 230-369 (396)
26 3ot5_A UDP-N-acetylglucosamine 98.8 6.7E-08 2.3E-12 94.2 15.5 131 190-342 223-363 (403)
27 4hwg_A UDP-N-acetylglucosamine 98.7 4.8E-07 1.6E-11 87.5 17.6 245 27-342 83-344 (385)
28 1v4v_A UDP-N-acetylglucosamine 98.7 6.6E-07 2.3E-11 85.6 17.5 129 191-342 198-336 (376)
29 3okp_A GDP-mannose-dependent a 98.7 6.2E-06 2.1E-10 78.8 23.9 130 191-342 197-346 (394)
30 1vgv_A UDP-N-acetylglucosamine 98.6 6.8E-07 2.3E-11 85.6 16.1 130 191-342 205-344 (384)
31 2gek_A Phosphatidylinositol ma 98.4 0.00016 5.4E-09 69.3 25.2 129 192-342 208-351 (406)
32 3beo_A UDP-N-acetylglucosamine 98.4 7.8E-06 2.7E-10 77.8 15.3 130 191-342 205-344 (375)
33 2jjm_A Glycosyl transferase, g 98.3 0.00033 1.1E-08 67.0 26.7 81 249-342 267-352 (394)
34 3c48_A Predicted glycosyltrans 98.3 0.00015 5.2E-09 70.4 22.5 96 248-356 305-408 (438)
35 2f9f_A First mannosyl transfer 98.2 4.4E-06 1.5E-10 71.2 9.8 139 192-353 23-173 (177)
36 3fro_A GLGA glycogen synthase; 98.2 0.00041 1.4E-08 66.9 23.3 175 179-381 241-430 (439)
37 2iw1_A Lipopolysaccharide core 97.9 0.00019 6.4E-09 67.9 13.7 143 191-355 195-353 (374)
38 2r60_A Glycosyl transferase, g 97.8 0.0013 4.6E-08 65.0 19.9 136 192-342 262-426 (499)
39 2vsy_A XCC0866; transferase, g 97.8 0.00079 2.7E-08 67.8 17.6 117 249-381 434-559 (568)
40 3qhp_A Type 1 capsular polysac 97.5 0.00059 2E-08 56.8 10.7 139 192-354 2-155 (166)
41 2bfw_A GLGA glycogen synthase; 97.5 0.0043 1.5E-07 53.0 15.5 89 250-352 96-194 (200)
42 2x6q_A Trehalose-synthase TRET 97.4 0.0013 4.4E-08 63.3 13.0 79 249-342 293-381 (416)
43 2iuy_A Avigt4, glycosyltransfe 97.4 0.00038 1.3E-08 65.2 8.0 127 194-339 164-307 (342)
44 4gyw_A UDP-N-acetylglucosamine 97.3 0.0027 9.3E-08 66.2 14.4 141 190-342 521-670 (723)
45 3oy2_A Glycosyltransferase B73 97.3 0.0031 1E-07 60.5 13.3 109 251-380 256-389 (413)
46 3s28_A Sucrose synthase 1; gly 97.2 0.04 1.4E-06 57.9 21.8 81 249-342 640-736 (816)
47 3q3e_A HMW1C-like glycosyltran 97.2 0.0026 8.9E-08 64.4 11.7 139 192-342 441-590 (631)
48 2xci_A KDO-transferase, 3-deox 97.1 0.0027 9.1E-08 60.7 10.9 97 251-358 262-364 (374)
49 3rhz_A GTF3, nucleotide sugar 96.8 0.0016 5.5E-08 61.5 6.8 111 250-378 215-337 (339)
50 1rzu_A Glycogen synthase 1; gl 96.5 0.058 2E-06 52.7 15.7 132 192-342 291-445 (485)
51 2qzs_A Glycogen synthase; glyc 96.1 0.085 2.9E-06 51.5 14.3 133 191-342 291-446 (485)
52 2hy7_A Glucuronosyltransferase 94.8 0.17 6E-06 48.4 11.1 76 248-342 264-354 (406)
53 2x0d_A WSAF; GT4 family, trans 94.3 0.079 2.7E-06 51.1 7.2 80 249-342 295-381 (413)
54 3vue_A GBSS-I, granule-bound s 90.9 1.4 4.9E-05 43.8 11.2 138 192-339 327-476 (536)
55 1psw_A ADP-heptose LPS heptosy 86.3 3.1 0.00011 38.3 9.4 96 190-293 179-286 (348)
56 1uqt_A Alpha, alpha-trehalose- 83.9 9.6 0.00033 37.2 12.1 106 254-381 337-454 (482)
57 3tov_A Glycosyl transferase fa 79.9 2.1 7.3E-05 39.9 5.4 96 190-293 184-286 (349)
58 3t5t_A Putative glycosyltransf 79.8 14 0.00047 36.3 11.3 111 250-381 353-473 (496)
59 2gt1_A Lipopolysaccharide hept 71.4 4.8 0.00017 36.7 5.3 135 190-342 177-324 (326)
60 3nb0_A Glycogen [starch] synth 59.7 13 0.00043 38.2 6.0 41 254-296 498-551 (725)
61 2i2c_A Probable inorganic poly 56.7 9.3 0.00032 34.2 4.1 51 269-340 37-93 (272)
62 2iz6_A Molybdenum cofactor car 54.6 39 0.0013 28.0 7.4 100 178-296 35-140 (176)
63 2lpm_A Two-component response 52.3 10 0.00035 29.5 3.2 41 29-71 41-86 (123)
64 3l7i_A Teichoic acid biosynthe 51.9 17 0.00059 37.3 5.7 117 254-383 604-723 (729)
65 3dfz_A SIRC, precorrin-2 dehyd 50.8 18 0.00061 31.4 4.8 148 191-360 32-186 (223)
66 3to5_A CHEY homolog; alpha(5)b 50.4 20 0.00068 28.2 4.7 41 32-74 48-97 (134)
67 3s2u_A UDP-N-acetylglucosamine 46.6 31 0.001 32.0 6.1 99 191-293 3-121 (365)
68 2q5c_A NTRC family transcripti 46.4 23 0.00079 29.9 4.7 45 27-76 128-172 (196)
69 3gl9_A Response regulator; bet 45.7 35 0.0012 25.3 5.4 43 29-73 34-85 (122)
70 4e5s_A MCCFLIKE protein (BA_56 44.9 54 0.0018 30.2 7.3 75 203-296 61-137 (331)
71 3euw_A MYO-inositol dehydrogen 43.4 1.9E+02 0.0063 26.1 11.1 108 192-316 6-121 (344)
72 3qjg_A Epidermin biosynthesis 42.8 1E+02 0.0035 25.4 8.1 113 192-313 7-142 (175)
73 4b4k_A N5-carboxyaminoimidazol 40.9 1.5E+02 0.0053 24.5 10.5 142 191-361 22-174 (181)
74 3m2t_A Probable dehydrogenase; 39.3 1.3E+02 0.0043 27.6 9.2 109 192-316 7-124 (359)
75 3q2i_A Dehydrogenase; rossmann 38.8 1.8E+02 0.0062 26.3 10.2 127 192-340 15-150 (354)
76 2a33_A Hypothetical protein; s 38.1 85 0.0029 26.8 7.1 102 178-295 35-147 (215)
77 3goc_A Endonuclease V; alpha-b 37.7 51 0.0018 28.7 5.6 37 31-70 98-141 (237)
78 4h1h_A LMO1638 protein; MCCF-l 37.6 78 0.0027 28.9 7.2 74 204-296 62-137 (327)
79 1ydh_A AT5G11950; structural g 37.2 22 0.00074 30.7 3.1 98 178-295 31-143 (216)
80 2pju_A Propionate catabolism o 37.2 44 0.0015 28.9 5.1 29 268-297 64-92 (225)
81 2w36_A Endonuclease V; hypoxan 36.1 63 0.0021 28.0 5.8 43 28-70 88-137 (225)
82 1rcu_A Conserved hypothetical 36.1 51 0.0017 27.8 5.2 97 177-295 47-150 (195)
83 2pju_A Propionate catabolism o 35.7 32 0.0011 29.8 4.0 40 27-71 140-179 (225)
84 3m6m_D Sensory/regulatory prot 35.5 41 0.0014 25.8 4.4 42 30-73 47-99 (143)
85 3t6k_A Response regulator rece 35.1 58 0.002 24.6 5.2 42 30-73 37-87 (136)
86 3tl4_X Glutaminyl-tRNA synthet 34.8 55 0.0019 27.4 5.1 63 306-378 107-177 (187)
87 1xmp_A PURE, phosphoribosylami 34.5 1.9E+02 0.0065 23.7 10.6 144 191-363 11-165 (170)
88 4hkt_A Inositol 2-dehydrogenas 34.4 2.3E+02 0.0079 25.3 10.0 61 256-316 52-119 (331)
89 3f6p_A Transcriptional regulat 34.3 68 0.0023 23.5 5.4 43 29-73 34-82 (120)
90 1zl0_A Hypothetical protein PA 34.1 1.1E+02 0.0036 27.9 7.4 76 202-296 62-139 (311)
91 3sr3_A Microcin immunity prote 34.0 85 0.0029 28.8 6.9 74 204-296 63-138 (336)
92 2q5c_A NTRC family transcripti 33.4 34 0.0012 28.8 3.7 31 266-297 50-80 (196)
93 3db2_A Putative NADPH-dependen 33.3 1.8E+02 0.0061 26.4 9.1 108 192-316 7-122 (354)
94 1yt5_A Inorganic polyphosphate 33.1 20 0.00067 31.7 2.2 54 265-341 41-97 (258)
95 3ga2_A Endonuclease V; alpha-b 32.3 50 0.0017 29.0 4.6 38 30-70 99-143 (246)
96 1u0t_A Inorganic polyphosphate 31.3 25 0.00086 31.9 2.7 30 264-295 74-107 (307)
97 2an1_A Putative kinase; struct 31.1 27 0.00092 31.3 2.9 30 264-295 62-95 (292)
98 3u3x_A Oxidoreductase; structu 30.3 3.1E+02 0.011 24.9 10.8 110 192-316 28-144 (361)
99 3pdi_B Nitrogenase MOFE cofact 30.3 53 0.0018 31.7 5.0 33 30-70 367-399 (458)
100 1dbw_A Transcriptional regulat 29.9 89 0.003 22.9 5.4 42 30-73 36-84 (126)
101 2vqe_B 30S ribosomal protein S 29.6 34 0.0012 30.3 3.1 33 42-74 157-191 (256)
102 1o97_C Electron transferring f 29.4 76 0.0026 28.1 5.5 29 43-71 112-146 (264)
103 1qkk_A DCTD, C4-dicarboxylate 29.2 1.2E+02 0.0042 23.1 6.4 50 286-342 74-123 (155)
104 3s40_A Diacylglycerol kinase; 29.2 55 0.0019 29.4 4.6 81 192-295 11-97 (304)
105 3c3m_A Response regulator rece 28.8 85 0.0029 23.6 5.2 41 31-73 37-86 (138)
106 1t35_A Hypothetical protein YV 28.1 88 0.003 26.1 5.4 101 178-295 23-135 (191)
107 4fb5_A Probable oxidoreductase 27.7 2.6E+02 0.0089 25.3 9.3 116 192-316 27-150 (393)
108 3lp6_A Phosphoribosylaminoimid 27.6 2.6E+02 0.0088 23.0 8.9 142 191-360 7-156 (174)
109 3a10_A Response regulator; pho 27.1 1.2E+02 0.004 21.7 5.5 42 30-73 34-82 (116)
110 3p9x_A Phosphoribosylglycinami 26.9 78 0.0027 27.0 4.9 44 28-71 14-59 (211)
111 1meo_A Phosophoribosylglycinam 26.6 79 0.0027 26.9 4.9 43 28-70 12-56 (209)
112 1efv_B Electron transfer flavo 26.4 98 0.0034 27.2 5.6 29 43-71 116-150 (255)
113 3cg0_A Response regulator rece 26.4 84 0.0029 23.4 4.7 45 28-74 41-92 (140)
114 4gmf_A Yersiniabactin biosynth 25.7 1.5E+02 0.0051 27.6 7.1 61 256-316 57-124 (372)
115 4ds3_A Phosphoribosylglycinami 25.5 75 0.0025 27.1 4.5 44 27-70 18-63 (209)
116 2ywr_A Phosphoribosylglycinami 25.2 95 0.0033 26.4 5.2 43 29-71 14-58 (216)
117 1p3y_1 MRSD protein; flavoprot 24.5 1.3E+02 0.0044 25.2 5.8 140 192-340 10-186 (194)
118 1pq4_A Periplasmic binding pro 24.5 1.1E+02 0.0036 27.4 5.6 48 26-75 222-271 (291)
119 2l82_A Designed protein OR32; 24.4 1.1E+02 0.0039 22.9 4.7 35 192-230 2-36 (162)
120 2etv_A Iron(III) ABC transport 24.3 83 0.0029 28.7 5.0 38 28-71 87-125 (346)
121 3afo_A NADH kinase POS5; alpha 24.2 90 0.0031 29.4 5.2 34 260-295 109-147 (388)
122 1tmy_A CHEY protein, TMY; chem 24.1 98 0.0034 22.3 4.6 41 31-73 37-84 (120)
123 2bon_A Lipid kinase; DAG kinas 24.0 1.5E+02 0.0051 26.9 6.6 78 193-295 33-118 (332)
124 1efp_B ETF, protein (electron 23.9 98 0.0033 27.1 5.1 29 43-71 113-147 (252)
125 3e9m_A Oxidoreductase, GFO/IDH 23.9 3.9E+02 0.013 23.8 12.5 61 256-316 56-123 (330)
126 2lnd_A De novo designed protei 23.6 73 0.0025 22.5 3.3 49 286-339 50-100 (112)
127 3tqr_A Phosphoribosylglycinami 23.6 89 0.003 26.7 4.6 44 28-71 17-61 (215)
128 3tla_A MCCF; serine protease, 23.2 1.1E+02 0.0036 28.7 5.4 74 203-295 92-167 (371)
129 3cu5_A Two component transcrip 22.5 1.2E+02 0.0041 22.9 5.0 41 30-72 38-85 (141)
130 1jkx_A GART;, phosphoribosylgl 22.4 94 0.0032 26.4 4.6 43 28-70 12-56 (212)
131 1zgz_A Torcad operon transcrip 22.2 1.2E+02 0.004 21.9 4.7 41 31-73 36-82 (122)
132 1eiw_A Hypothetical protein MT 22.0 1.3E+02 0.0046 22.6 4.9 64 264-339 37-109 (111)
133 2qzj_A Two-component response 21.8 1.1E+02 0.0037 23.0 4.5 41 31-73 38-84 (136)
134 3evn_A Oxidoreductase, GFO/IDH 21.8 4.2E+02 0.014 23.5 10.4 61 256-316 56-123 (329)
135 2pl1_A Transcriptional regulat 21.7 1.6E+02 0.0054 21.0 5.4 42 31-74 34-82 (121)
136 1v5e_A Pyruvate oxidase; oxido 21.7 1.9E+02 0.0065 28.6 7.4 28 267-294 68-101 (590)
137 3av3_A Phosphoribosylglycinami 21.5 1.1E+02 0.0037 26.0 4.8 42 29-70 16-59 (212)
138 1xhf_A DYE resistance, aerobic 21.4 1.3E+02 0.0045 21.6 4.9 41 31-73 37-83 (123)
139 4hn9_A Iron complex transport 21.4 79 0.0027 28.7 4.2 30 43-72 116-145 (335)
140 2qv7_A Diacylglycerol kinase D 21.3 1.3E+02 0.0044 27.4 5.6 27 269-295 82-114 (337)
141 4grd_A N5-CAIR mutase, phospho 21.3 2.9E+02 0.01 22.6 7.0 85 191-297 12-100 (173)
142 3u7q_A Nitrogenase molybdenum- 21.3 80 0.0027 30.7 4.3 34 29-70 408-441 (492)
143 2gkg_A Response regulator homo 21.2 1.4E+02 0.0049 21.4 5.1 47 286-340 79-125 (127)
144 3sbx_A Putative uncharacterize 21.1 1.5E+02 0.0052 24.7 5.5 102 178-295 34-146 (189)
145 3ors_A N5-carboxyaminoimidazol 21.0 3E+02 0.01 22.4 7.0 141 191-360 3-154 (163)
146 3kcq_A Phosphoribosylglycinami 21.0 91 0.0031 26.6 4.2 45 27-71 19-65 (215)
147 3gi1_A LBP, laminin-binding pr 21.0 1.1E+02 0.0038 27.2 5.0 45 27-73 214-260 (286)
148 3rg8_A Phosphoribosylaminoimid 20.9 1.6E+02 0.0054 23.9 5.3 138 192-359 3-148 (159)
149 3hww_A 2-succinyl-5-enolpyruvy 20.7 1.3E+02 0.0046 29.4 6.0 27 268-294 72-104 (556)
150 2b4a_A BH3024; flavodoxin-like 20.7 1.1E+02 0.0037 22.8 4.3 40 30-71 48-95 (138)
151 3md9_A Hemin-binding periplasm 20.6 90 0.0031 26.8 4.2 29 43-71 59-89 (255)
152 3ezy_A Dehydrogenase; structur 20.1 4.7E+02 0.016 23.3 9.7 61 256-316 53-120 (344)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2.4e-59 Score=464.22 Aligned_cols=350 Identities=30% Similarity=0.511 Sum_probs=290.0
Q ss_pred CCCCCCCCCccccHHHHHHHHHhccccHHHHHHHHHhhcC-CCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHH
Q 047540 1 GLPDPSNENANQDANSLFESITNNVMLQPFLDLLQKLKSS-SNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFK 79 (388)
Q Consensus 1 glp~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ll~~l~~~-~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~ 79 (388)
|+|++ .+..++...++..+... +.+.++++++++.++ +.++||||+|.+++|+..+|+++|||++.||+++++.++
T Consensus 77 glp~~--~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~ 153 (454)
T 3hbf_A 77 GLPKG--YVSSGNPREPIFLFIKA-MQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLL 153 (454)
T ss_dssp CCCTT--CCCCSCTTHHHHHHHHH-HHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHH
T ss_pred CCCCC--ccccCChHHHHHHHHHH-HHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHH
Confidence 67777 55555655666666555 555666666665322 358999999999999999999999999999999998887
Q ss_pred HhhhhcccccC------------CCCC-----ccc--------ccchhHHHHHHHHHHhhccCCeEEEcChhhhhHHHHH
Q 047540 80 GCMQLRTLEEN------------TTLT-----SLI--------DLNSYATRVAIEAAKNAAKASAVVIHTFDALERQVLD 134 (388)
Q Consensus 80 ~~~~~~~~~~~------------~~~p-----r~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~ 134 (388)
.+.+++.+... .++| +.+ +......+.+.+..+.+.+++++++|||++||++.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~ 233 (454)
T 3hbf_A 154 THVYTDLIREKTGSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIEN 233 (454)
T ss_dssp HHHTHHHHHHTCCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHH
T ss_pred HHHhhHHHHhhcCCCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHH
Confidence 76654332110 1122 111 1223456666777788889999999999999999999
Q ss_pred HHHhhCCCceecCCcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHH
Q 047540 135 ALSAMFPNLFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAM 214 (388)
Q Consensus 135 ~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~ 214 (388)
.+++.+|++++|||++..... .....+.+|.+||+.++ ++++|||+|||++..+.+++.+++.
T Consensus 234 ~~~~~~~~v~~vGPl~~~~~~----------------~~~~~~~~~~~wLd~~~-~~~vVyvsfGS~~~~~~~~~~el~~ 296 (454)
T 3hbf_A 234 ELNSKFKLLLNVGPFNLTTPQ----------------RKVSDEHGCLEWLDQHE-NSSVVYISFGSVVTPPPHELTALAE 296 (454)
T ss_dssp HHHTTSSCEEECCCHHHHSCC----------------SCCCCTTCHHHHHHTSC-TTCEEEEECCSSCCCCHHHHHHHHH
T ss_pred HHHhcCCCEEEECCccccccc----------------ccccchHHHHHHHhcCC-CCceEEEecCCCCcCCHHHHHHHHH
Confidence 999999999999999854310 11123567999999988 8999999999999888999999999
Q ss_pred HHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecC
Q 047540 215 GLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWP 294 (388)
Q Consensus 215 al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P 294 (388)
+|++.+++|||+++.+.. ..+|+++.++.++|+++++|+||.++|+|+++++|||||||||++|++++|||+|++|
T Consensus 297 ~l~~~~~~flw~~~~~~~----~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P 372 (454)
T 3hbf_A 297 SLEECGFPFIWSFRGDPK----EKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRP 372 (454)
T ss_dssp HHHHHCCCEEEECCSCHH----HHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred HHHhCCCeEEEEeCCcch----hcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCc
Confidence 999999999999986531 2377888888899999999999999999999999999999999999999999999999
Q ss_pred CccchhHhHHHHhhhhceeEEeeecCCC-CCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHH
Q 047540 295 FLGDQATNCRYTCNEWGVGMDITNSGDD-NQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEK 373 (388)
Q Consensus 295 ~~~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~ 373 (388)
+++||+.||+++++.+|+|+.+ + ..++.++|+++|+++|+++++++||+||+++++.+++++++||||..++++
T Consensus 373 ~~~DQ~~Na~~v~~~~g~Gv~l-----~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~ 447 (454)
T 3hbf_A 373 FFGDQGLNTILTESVLEIGVGV-----DNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTT 447 (454)
T ss_dssp CSTTHHHHHHHHHTTSCSEEEC-----GGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHH
T ss_pred ccccHHHHHHHHHHhhCeeEEe-----cCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHH
Confidence 9999999999995547999999 5 579999999999999998877789999999999999999999999999999
Q ss_pred HHHHHH
Q 047540 374 LEQPVI 379 (388)
Q Consensus 374 ~v~~l~ 379 (388)
|++.+.
T Consensus 448 ~v~~i~ 453 (454)
T 3hbf_A 448 LIQIVT 453 (454)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 999863
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.5e-54 Score=435.88 Aligned_cols=357 Identities=46% Similarity=0.869 Sum_probs=281.2
Q ss_pred cccHHHHHHHHHhccccHHHHHHHHHhhcC--CCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhhcccc
Q 047540 11 NQDANSLFESITNNVMLQPFLDLLQKLKSS--SNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTLE 88 (388)
Q Consensus 11 ~~d~~~~~~~~~~~~~~~~~~~ll~~l~~~--~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~ 88 (388)
..++..+++.+... +.+.++++++.+.++ ..++||||+|.+++|+..+|+++|||++.+++++++....+.+++.+.
T Consensus 85 ~~~~~~~~~~~~~~-~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 163 (482)
T 2pq6_A 85 SQDVPTLCQSVRKN-FLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFV 163 (482)
T ss_dssp -CCHHHHHHHHTTS-SHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHH
T ss_pred chhHHHHHHHHHHH-hhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHH
Confidence 35666778877677 889999999998642 248999999999999999999999999999999876655433222100
Q ss_pred ------------------cCC--CCC-----cccc---------cchhHHHHHHHHHHhhccCCeEEEcChhhhhHHHHH
Q 047540 89 ------------------ENT--TLT-----SLID---------LNSYATRVAIEAAKNAAKASAVVIHTFDALERQVLD 134 (388)
Q Consensus 89 ------------------~~~--~~p-----r~~~---------~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~ 134 (388)
... ++| +... ......+.+....+...+++++++||+++||++.++
T Consensus 164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~ 243 (482)
T 2pq6_A 164 ERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVIN 243 (482)
T ss_dssp HTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHH
T ss_pred hcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHH
Confidence 000 111 1100 012233444445566678899999999999999999
Q ss_pred HHHhhCCCceecCCcccc-hhhccccCCCCCCCC-CCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHH
Q 047540 135 ALSAMFPNLFTIGPLQLL-LNQINEQGGNSLSST-GYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEV 212 (388)
Q Consensus 135 ~~~~~~p~~~~vGpl~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~ 212 (388)
.+++.+|++++|||++.. +.... .. .. ..+..+++.+.+|.+||+.++ ++++|||||||+...+.+++.++
T Consensus 244 ~~~~~~~~v~~VGPl~~~~~~~~~-~~-----~~~~~~~~l~~~~~~~~~wld~~~-~~~vv~vs~GS~~~~~~~~~~~~ 316 (482)
T 2pq6_A 244 ALSSTIPSIYPIGPLPSLLKQTPQ-IH-----QLDSLDSNLWKEDTECLDWLESKE-PGSVVYVNFGSTTVMTPEQLLEF 316 (482)
T ss_dssp HHHTTCTTEEECCCHHHHHHTSTT-GG-----GGCC---------CHHHHHHTTSC-TTCEEEEECCSSSCCCHHHHHHH
T ss_pred HHHHhCCcEEEEcCCccccccccc-cc-----ccccccccccccchHHHHHHhcCC-CCceEEEecCCcccCCHHHHHHH
Confidence 999988999999999864 21100 00 00 000123344567999999987 78999999999988888889999
Q ss_pred HHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEe
Q 047540 213 AMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMIC 292 (388)
Q Consensus 213 ~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~ 292 (388)
+.+|++.+++|||+++.+...+....+|+++.++.++|+++++|+||.++|+|+++++|||||||||++|++++|||+|+
T Consensus 317 ~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~ 396 (482)
T 2pq6_A 317 AWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLC 396 (482)
T ss_dssp HHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEE
T ss_pred HHHHHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEe
Confidence 99999999999999986432221223678888888899999999999999999999999999999999999999999999
Q ss_pred cCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHH
Q 047540 293 WPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLE 372 (388)
Q Consensus 293 ~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~ 372 (388)
+|+++||+.||+++++++|+|+.+ ++.++.++|.++|+++|+|++++.||+||+++++.+++++.+||||..+++
T Consensus 397 ~P~~~dQ~~na~~~~~~~G~g~~l-----~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~ 471 (482)
T 2pq6_A 397 WPFFADQPTDCRFICNEWEIGMEI-----DTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLN 471 (482)
T ss_dssp CCCSTTHHHHHHHHHHTSCCEEEC-----CSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHH
T ss_pred cCcccchHHHHHHHHHHhCEEEEE-----CCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 999999999999995579999999 667999999999999999986677999999999999999999999999999
Q ss_pred HHHHHHHH
Q 047540 373 KLEQPVIK 380 (388)
Q Consensus 373 ~~v~~l~~ 380 (388)
+|++.+..
T Consensus 472 ~~v~~~~~ 479 (482)
T 2pq6_A 472 KVIKDVLL 479 (482)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHHh
Confidence 99998743
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=4.1e-53 Score=422.07 Aligned_cols=350 Identities=29% Similarity=0.533 Sum_probs=272.1
Q ss_pred CCCCCCCCCccccHHHHHHHHHhccccHHHHHHHHHhhcC-CCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHH
Q 047540 1 GLPDPSNENANQDANSLFESITNNVMLQPFLDLLQKLKSS-SNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFK 79 (388)
Q Consensus 1 glp~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ll~~l~~~-~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~ 79 (388)
|+|++ .+...+...++..+... +.+.++++++++.++ +.+|||||+|.++.|+..+|+++|||++.+++++++.+.
T Consensus 72 glp~~--~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~ 148 (456)
T 2c1x_A 72 GVPEG--YVFAGRPQEDIELFTRA-APESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLS 148 (456)
T ss_dssp CCCTT--CCCCCCTTHHHHHHHHH-HHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHH
T ss_pred CCCCc--ccccCChHHHHHHHHHH-hHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHH
Confidence 35554 22233444555555554 445566666654321 258999999999999999999999999999999876654
Q ss_pred Hhhhhcccc------------c--CCCCC-----cccc---------cchhHHHHHHHHHHhhccCCeEEEcChhhhhHH
Q 047540 80 GCMQLRTLE------------E--NTTLT-----SLID---------LNSYATRVAIEAAKNAAKASAVVIHTFDALERQ 131 (388)
Q Consensus 80 ~~~~~~~~~------------~--~~~~p-----r~~~---------~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~ 131 (388)
.+.+.+.+. . ..++| ++.+ ....+.+...+..+...+++++++||+++||++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~ 228 (456)
T 2c1x_A 149 THVYIDEIREKIGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDS 228 (456)
T ss_dssp HHHTHHHHHHHHCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHH
T ss_pred HHhhhHHHHhccCCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHH
Confidence 432221100 0 00122 1110 011223334444455678899999999999999
Q ss_pred HHHHHHhhCCCceecCCcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHH
Q 047540 132 VLDALSAMFPNLFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTE 211 (388)
Q Consensus 132 ~l~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~ 211 (388)
.++.+++.+|++++|||++..... .. +..+.+|.+||+.++ ++++|||||||++....+++.+
T Consensus 229 ~~~~~~~~~~~~~~vGpl~~~~~~---------------~~-~~~~~~~~~wl~~~~-~~~vv~vs~GS~~~~~~~~~~~ 291 (456)
T 2c1x_A 229 LTNDLKSKLKTYLNIGPFNLITPP---------------PV-VPNTTGCLQWLKERK-PTSVVYISFGTVTTPPPAEVVA 291 (456)
T ss_dssp HHHHHHHHSSCEEECCCHHHHC-------------------------CHHHHHHTSC-TTCEEEEECCSSCCCCHHHHHH
T ss_pred HHHHHHhcCCCEEEecCcccCccc---------------cc-ccchhhHHHHHhcCC-CcceEEEecCccccCCHHHHHH
Confidence 999999988999999999753210 00 112456999999987 7899999999998888888999
Q ss_pred HHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEE
Q 047540 212 VAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMI 291 (388)
Q Consensus 212 ~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i 291 (388)
++.+|++.+.+|||+++.+.. ..+|+++.++.++|+++++|+||.++|+|+++++|||||||||++|++++|||+|
T Consensus 292 ~~~~l~~~~~~~lw~~~~~~~----~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i 367 (456)
T 2c1x_A 292 LSEALEASRVPFIWSLRDKAR----VHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLI 367 (456)
T ss_dssp HHHHHHHHTCCEEEECCGGGG----GGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEE
T ss_pred HHHHHHhcCCeEEEEECCcch----hhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEE
Confidence 999999999999999986531 2367778778888999999999999999999999999999999999999999999
Q ss_pred ecCCccchhHhHHHHhhhhceeEEeeecCCC-CCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHH
Q 047540 292 CWPFLGDQATNCRYTCNEWGVGMDITNSGDD-NQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATN 370 (388)
Q Consensus 292 ~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~ 370 (388)
++|++.||+.||+++++.+|+|+.+ + ..++.++|+++|+++|+|+++++||+||+++++.+++++.+||||.++
T Consensus 368 ~~P~~~dQ~~Na~~l~~~~g~g~~l-----~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~ 442 (456)
T 2c1x_A 368 CRPFFGDQRLNGRMVEDVLEIGVRI-----EGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTEN 442 (456)
T ss_dssp ECCCSTTHHHHHHHHHHTSCCEEEC-----GGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHH
T ss_pred ecCChhhHHHHHHHHHHHhCeEEEe-----cCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHH
Confidence 9999999999999995545999999 5 679999999999999999866779999999999999999999999999
Q ss_pred HHHHHHHHH
Q 047540 371 LEKLEQPVI 379 (388)
Q Consensus 371 ~~~~v~~l~ 379 (388)
+++||+.+.
T Consensus 443 l~~~v~~~~ 451 (456)
T 2c1x_A 443 FITLVDLVS 451 (456)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 999999874
No 4
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.3e-51 Score=413.67 Aligned_cols=350 Identities=31% Similarity=0.523 Sum_probs=270.9
Q ss_pred cHHHHHHHHHhccccHHHHHHHHHhhcCCCCc-cEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhhcccc---
Q 047540 13 DANSLFESITNNVMLQPFLDLLQKLKSSSNSV-SCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTLE--- 88 (388)
Q Consensus 13 d~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~-D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~--- 88 (388)
++...+...... +.+.++++++++.+ ..++ ||||+|.++.|+..+|+++|||++.+++++++.+..+.+++...
T Consensus 81 ~~~~~~~~~~~~-~~~~l~~ll~~~~~-~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 158 (480)
T 2vch_A 81 RIESRISLTVTR-SNPELRKVFDSFVE-GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETV 158 (480)
T ss_dssp CHHHHHHHHHHT-THHHHHHHHHHHHH-TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHh-hhHHHHHHHHHhcc-CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcC
Confidence 333333344556 77889999988742 2378 99999999999999999999999999999877665443322110
Q ss_pred ------------cCCCCC--------cccccchhHHHHHHHHHHhhccCCeEEEcChhhhhHHHHHHHHh---hCCCcee
Q 047540 89 ------------ENTTLT--------SLIDLNSYATRVAIEAAKNAAKASAVVIHTFDALERQVLDALSA---MFPNLFT 145 (388)
Q Consensus 89 ------------~~~~~p--------r~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~~~~~---~~p~~~~ 145 (388)
.+++.| .+........+.+......+.+++++++||+++||++.+...+. .+|++++
T Consensus 159 ~~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~~ 238 (480)
T 2vch_A 159 SCEFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYP 238 (480)
T ss_dssp CSCGGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEEE
T ss_pred CCcccccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcEEE
Confidence 112222 01111112334444555667788999999999999988777653 2478999
Q ss_pred cCCcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEE
Q 047540 146 IGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLW 225 (388)
Q Consensus 146 vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw 225 (388)
|||++.... . ...+..+.+|.+||+.++ ++++|||||||+...+.+++.+++.+|+.++++|||
T Consensus 239 vGpl~~~~~-----------~----~~~~~~~~~~~~wLd~~~-~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw 302 (480)
T 2vch_A 239 VGPLVNIGK-----------Q----EAKQTEESECLKWLDNQP-LGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLW 302 (480)
T ss_dssp CCCCCCCSC-----------S----CC-----CHHHHHHHTSC-TTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred Eeccccccc-----------c----ccCccchhHHHHHhcCCC-CCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 999975321 0 000123468999999987 789999999999888889999999999999999999
Q ss_pred EEcCCCCC-----------CC-CCCCchhHHHhhhcCccccc-ccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEe
Q 047540 226 IIRPDLVT-----------GE-TADMPSEFEVKAKETGFIAR-WCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMIC 292 (388)
Q Consensus 226 ~~~~~~~~-----------~~-~~~~~~~~~~~~~~~~~v~~-~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~ 292 (388)
+++..... .. ...+|+++.++++++++++. |+||.+||+|+++++|||||||||++||+++|||||+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~ 382 (480)
T 2vch_A 303 VIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIA 382 (480)
T ss_dssp EECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEE
T ss_pred EECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEe
Confidence 99865321 01 12478888888877776655 9999999999999999999999999999999999999
Q ss_pred cCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHH
Q 047540 293 WPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLE 372 (388)
Q Consensus 293 ~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~ 372 (388)
+|+++||+.||+++++++|+|+.+. .+++..++.++|+++|+++|++++++.||+||+++++.+++++.+||+|.++++
T Consensus 383 ~P~~~DQ~~na~~l~~~~G~g~~l~-~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~ 461 (480)
T 2vch_A 383 WPLYAEQKMNAVLLSEDIRAALRPR-AGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALS 461 (480)
T ss_dssp CCCSTTHHHHHHHHHHTTCCEECCC-CCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHH
T ss_pred ccccccchHHHHHHHHHhCeEEEee-cccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 9999999999999767899999992 111126999999999999998665567999999999999999999999999999
Q ss_pred HHHHHHHHh
Q 047540 373 KLEQPVIKL 381 (388)
Q Consensus 373 ~~v~~l~~~ 381 (388)
+||+.+.+.
T Consensus 462 ~~v~~~~~~ 470 (480)
T 2vch_A 462 LVALKWKAH 470 (480)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998763
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=2.6e-49 Score=395.44 Aligned_cols=335 Identities=28% Similarity=0.486 Sum_probs=264.3
Q ss_pred HHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhhcccc------------
Q 047540 21 ITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTLE------------ 88 (388)
Q Consensus 21 ~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~------------ 88 (388)
.... +.+.++++++++. +.+|||||+|.++.|+..+|+++|||++.+++++++.+..+.+++...
T Consensus 95 ~~~~-~~~~~~~ll~~~~--~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (463)
T 2acv_A 95 FLES-LIPHVKATIKTIL--SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDH 171 (463)
T ss_dssp HHHH-THHHHHHHHHHHC--CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCCCCCSSGGG
T ss_pred HHHh-hhHHHHHHHHhcc--CCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccCCCCCccccC
Confidence 3455 7788999998862 248999999999999999999999999999999887766554443210
Q ss_pred ----cCCCCCccc--ccc------hhHHHHHHHHHHhhccCCeEEEcChhhhhHHHHHHHHhh---CCCceecCCcccch
Q 047540 89 ----ENTTLTSLI--DLN------SYATRVAIEAAKNAAKASAVVIHTFDALERQVLDALSAM---FPNLFTIGPLQLLL 153 (388)
Q Consensus 89 ----~~~~~pr~~--~~~------~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~l~~~~~~---~p~~~~vGpl~~~~ 153 (388)
-+++.+.+. +.. ...+..+....+.+..++++++||+++||++.++..+.. .|++++|||++...
T Consensus 172 ~~~~~pg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~~v~~vGpl~~~~ 251 (463)
T 2acv_A 172 QLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVGPLLDLK 251 (463)
T ss_dssp CEECCTTCSSCEEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCCEEECCCCCCSS
T ss_pred ceeECCCCCCCCChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccccCCcEEEeCCCcccc
Confidence 112211111 000 113334444556667888999999999999887776553 57899999997432
Q ss_pred hhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCc-cCCHHHHHHHHHHHhcCCCCEEEEEcCCCC
Q 047540 154 NQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSV-YLTKQQLTEVAMGLVNSNHPFLWIIRPDLV 232 (388)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~iw~~~~~~~ 232 (388)
... ... .+ +..+.+|.+||+.++ ++++|||+|||++ ..+.+++.+++.+|++.+++|||+++.+
T Consensus 252 ~~~---------~~~--~~-~~~~~~~~~wl~~~~-~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~-- 316 (463)
T 2acv_A 252 GQP---------NPK--LD-QAQHDLILKWLDEQP-DKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE-- 316 (463)
T ss_dssp CCC---------BTT--BC-HHHHHHHHHHHHTSC-TTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC--
T ss_pred ccc---------ccc--cc-cccchhHHHHHhcCC-CCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCC--
Confidence 000 000 00 123568999999988 7899999999998 7888889999999999999999999863
Q ss_pred CCCCCCCchhHHHhh--hcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhh
Q 047540 233 TGETADMPSEFEVKA--KETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEW 310 (388)
Q Consensus 233 ~~~~~~~~~~~~~~~--~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~ 310 (388)
...+|+++.++. ++|+++++|+||.++|+|+++++|||||||||++|++++|||+|++|+++||+.||+++++++
T Consensus 317 ---~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~ 393 (463)
T 2acv_A 317 ---KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEW 393 (463)
T ss_dssp ---GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTS
T ss_pred ---cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHc
Confidence 012677787777 889999999999999999999999999999999999999999999999999999999965789
Q ss_pred ceeEEeeecCCCC--CCCHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q 047540 311 GVGMDITNSGDDN--QVGRNEVEKLVRELME-GEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPVI 379 (388)
Q Consensus 311 G~G~~l~~~~~~~--~~~~~~l~~ai~~vl~-~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~ 379 (388)
|+|+.+....++. .++.++|.++|+++|+ +++ ||+||+++++.+++++.+||||.+++++||+++.
T Consensus 394 g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~---~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 394 GVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSI---VHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp CCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCT---HHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred CeEEEEecccCCCCccccHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 9999981000123 6899999999999997 456 9999999999999999999999999999999874
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2.1e-33 Score=277.07 Aligned_cols=296 Identities=14% Similarity=0.129 Sum_probs=208.1
Q ss_pred cHHHHHHHHHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhh----cccc
Q 047540 13 DANSLFESITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQL----RTLE 88 (388)
Q Consensus 13 d~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~----~~~~ 88 (388)
+...++..+... ....++++.+.+++. +|||||+|.+.+|+..+|+++|||++.+++.+.......... +.+.
T Consensus 82 ~~~~~~~~~~~~-~~~~~~~l~~~l~~~--~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~ 158 (424)
T 2iya_A 82 DQESAMGLFLDE-AVRVLPQLEDAYADD--RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTA 158 (424)
T ss_dssp SHHHHHHHHHHH-HHHHHHHHHHHTTTS--CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCCC
T ss_pred hHHHHHHHHHHH-HHHHHHHHHHHHhcc--CCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccccccccc
Confidence 444444444443 334455555555544 899999999888999999999999999987764211110000 0000
Q ss_pred cCCC---CC-------cccc--c-chhHHHHHHHHHH----------hhccCCeEEEcChhhhhHHHHHHHHhhCCCcee
Q 047540 89 ENTT---LT-------SLID--L-NSYATRVAIEAAK----------NAAKASAVVIHTFDALERQVLDALSAMFPNLFT 145 (388)
Q Consensus 89 ~~~~---~p-------r~~~--~-~~~~~~~~~~~~~----------~~~~~~~~l~~s~~~le~~~l~~~~~~~p~~~~ 145 (388)
..+. .| .+.. . ...+.+.+..... ....++.+++++++.++++. +...+++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~----~~~~~~~~~ 234 (424)
T 2iya_A 159 DRGEEAAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG----DTVGDNYTF 234 (424)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG----GGCCTTEEE
T ss_pred ccccccccccccccchhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc----cCCCCCEEE
Confidence 0000 00 0000 0 0000111111111 11246789999999998762 234468999
Q ss_pred cCCcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEE
Q 047540 146 IGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLW 225 (388)
Q Consensus 146 vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw 225 (388)
|||+..... +..+|++..+ ++++|||++||......+.+..+++++++.+.+++|
T Consensus 235 vGp~~~~~~------------------------~~~~~~~~~~-~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~ 289 (424)
T 2iya_A 235 VGPTYGDRS------------------------HQGTWEGPGD-GRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVL 289 (424)
T ss_dssp CCCCCCCCG------------------------GGCCCCCCCS-SCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEE
T ss_pred eCCCCCCcc------------------------cCCCCCccCC-CCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEE
Confidence 999753110 0125666555 679999999999865678889999999988899999
Q ss_pred EEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHH
Q 047540 226 IIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRY 305 (388)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~ 305 (388)
.++.+... +.+ ...++|+.+.+|+||.++|+++++ ||||||+||++|++++|||+|++|+..||+.||++
T Consensus 290 ~~g~~~~~-------~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~ 359 (424)
T 2iya_A 290 SVGRFVDP-------ADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAER 359 (424)
T ss_dssp ECCTTSCG-------GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHH
T ss_pred EECCcCCh-------HHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHH
Confidence 88754211 111 123568999999999999999998 99999999999999999999999999999999999
Q ss_pred HhhhhceeEEeeecCCC-CCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH
Q 047540 306 TCNEWGVGMDITNSGDD-NQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEE 359 (388)
Q Consensus 306 v~~~~G~G~~l~~~~~~-~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~ 359 (388)
+ ++.|+|+.+ + ..++.++|.++|+++|+|++ |+++++++++.+++
T Consensus 360 l-~~~g~g~~~-----~~~~~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 360 I-VELGLGRHI-----PRDQVTAEKLREAVLAVASDPG---VAERLAAVRQEIRE 405 (424)
T ss_dssp H-HHTTSEEEC-----CGGGCCHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHT
T ss_pred H-HHCCCEEEc-----CcCCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHh
Confidence 9 678999999 5 57899999999999999987 99999999999883
No 7
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=5.9e-32 Score=266.23 Aligned_cols=279 Identities=15% Similarity=0.121 Sum_probs=195.5
Q ss_pred CCccEEEEcC-Ccch--HHHHHHHhCCCeEEEccCchhHHHHhhhhcccc-cCCCCCc-cccc------chhHHH----H
Q 047540 42 NSVSCIISDG-FMPF--TVTAAQQLGIPIALFFTIAARSFKGCMQLRTLE-ENTTLTS-LIDL------NSYATR----V 106 (388)
Q Consensus 42 ~~~D~iI~D~-~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~-~~~~~pr-~~~~------~~~~~~----~ 106 (388)
.+||+||+|. +.+| +..+|+++|||++.+++.+...... ++|... +..+.++ .... .....+ .
T Consensus 92 ~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~--~~p~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 169 (415)
T 1iir_A 92 EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSP--YYPPPPLGEPSTQDTIDIPAQWERNNQSAYQRYGGL 169 (415)
T ss_dssp TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCS--SSCCCC---------CHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCc--ccCCccCCccccchHHHHHHHHHHHHHHHHHHhHHH
Confidence 3899999998 6778 8999999999999998776432211 111110 0001011 0000 000000 0
Q ss_pred HHHHHHhh------------ccCCeEEEcChhhhhH-HHHHHHHhhCCCceecCCcccchhhccccCCCCCCCCCCCCCC
Q 047540 107 AIEAAKNA------------AKASAVVIHTFDALER-QVLDALSAMFPNLFTIGPLQLLLNQINEQGGNSLSSTGYKYNL 173 (388)
Q Consensus 107 ~~~~~~~~------------~~~~~~l~~s~~~le~-~~l~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~ 173 (388)
.......+ ... .+++|+++.|++ + ++.+ ++++|||+...+ .
T Consensus 170 ~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-----~~~~-~~~~vG~~~~~~------------~------- 223 (415)
T 1iir_A 170 LNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ-----PTDL-DAVQTGAWILPD------------E------- 223 (415)
T ss_dssp HHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC-----CCSS-CCEECCCCCCCC------------C-------
T ss_pred HHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC-----cccC-CeEeeCCCccCc------------c-------
Confidence 00111111 112 578899888887 4 3444 899999986421 0
Q ss_pred cccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCccc
Q 047540 174 WKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFI 253 (388)
Q Consensus 174 ~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v 253 (388)
++.+.++.+|++..+ ++|||++||+. ...+.+..+++++++.+.+++|+++..... . ...++|+.+
T Consensus 224 ~~~~~~~~~~l~~~~---~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~~~~-----~-----~~~~~~v~~ 289 (415)
T 1iir_A 224 RPLSPELAAFLDAGP---PPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWADLV-----L-----PDDGADCFA 289 (415)
T ss_dssp CCCCHHHHHHHHTSS---CCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTTCC-----C-----SSCGGGEEE
T ss_pred cCCCHHHHHHHhhCC---CeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCCccc-----c-----cCCCCCEEE
Confidence 113467899998765 89999999987 567788889999999999999998754311 1 123458899
Q ss_pred ccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC-CCCCHHHHHH
Q 047540 254 ARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD-NQVGRNEVEK 332 (388)
Q Consensus 254 ~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~l~~ 332 (388)
.+|+||.++|+++++ ||||||+||++|++++|||+|++|++.||..||+++ ++.|+|+.+ + ..++.++|.+
T Consensus 290 ~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~-----~~~~~~~~~l~~ 361 (415)
T 1iir_A 290 IGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRV-AELGVGVAH-----DGPIPTFDSLSA 361 (415)
T ss_dssp CSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HHHTSEEEC-----SSSSCCHHHHHH
T ss_pred eCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHH-HHCCCcccC-----CcCCCCHHHHHH
Confidence 999999999977776 999999999999999999999999999999999999 778999999 5 5789999999
Q ss_pred HHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q 047540 333 LVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPVI 379 (388)
Q Consensus 333 ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~ 379 (388)
+|+++ +|++ |+++++++++.++ . ..+...+.+.+..+.
T Consensus 362 ~i~~l-~~~~---~~~~~~~~~~~~~---~--~~~~~~~~~~i~~~~ 399 (415)
T 1iir_A 362 ALATA-LTPE---THARATAVAGTIR---T--DGAAVAARLLLDAVS 399 (415)
T ss_dssp HHHHH-TSHH---HHHHHHHHHHHSC---S--CHHHHHHHHHHHHHH
T ss_pred HHHHH-cCHH---HHHHHHHHHHHHh---h--cChHHHHHHHHHHHH
Confidence 99999 8877 9999999998876 2 233344444554443
No 8
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.98 E-value=8.7e-32 Score=262.83 Aligned_cols=154 Identities=20% Similarity=0.318 Sum_probs=126.9
Q ss_pred HHHhcCCCCCCCcEEEeeCCCccCC--HHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccC
Q 047540 181 LQWLDSKELPNSVVYVNFGSSVYLT--KQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCP 258 (388)
Q Consensus 181 ~~~l~~~~~~~~~v~vs~Gs~~~~~--~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p 258 (388)
.+|++..+ ++++|||+|||+.... ...+.++++++.+.+..++|..++..... .. ..++|+++.+|+|
T Consensus 228 ~~~l~~~~-~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~-~~--------~~~~~v~~~~~~p 297 (400)
T 4amg_A 228 PDWLPPAA-GRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLAL-LG--------ELPANVRVVEWIP 297 (400)
T ss_dssp CTTCSCCT-TCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCCC-CC--------CCCTTEEEECCCC
T ss_pred cccccccC-CCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccccc-cc--------cCCCCEEEEeecC
Confidence 36888888 8999999999986543 35678899999999999999987653211 11 2356899999999
Q ss_pred hHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC-CCCCHHHHHHHHHHH
Q 047540 259 QEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD-NQVGRNEVEKLVREL 337 (388)
Q Consensus 259 q~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~l~~ai~~v 337 (388)
|.++|+|+++ ||||||+||++|++++|||+|++|+++||+.||+++ ++.|+|+.+ + .+.++ ++|+++
T Consensus 298 ~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v-~~~G~g~~l-----~~~~~~~----~al~~l 365 (400)
T 4amg_A 298 LGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVL-TGLGIGFDA-----EAGSLGA----EQCRRL 365 (400)
T ss_dssp HHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHH-HHHTSEEEC-----CTTTCSH----HHHHHH
T ss_pred HHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHH-HHCCCEEEc-----CCCCchH----HHHHHH
Confidence 9999999888 999999999999999999999999999999999999 678999999 4 45554 467788
Q ss_pred HcCchHHHHHHHHHHHHHHHHH
Q 047540 338 MEGEKGMQMRNKASEWKRFAEE 359 (388)
Q Consensus 338 l~~~~~~~~~~~a~~l~~~~~~ 359 (388)
|+|++ ||+||+++++.+++
T Consensus 366 L~d~~---~r~~a~~l~~~~~~ 384 (400)
T 4amg_A 366 LDDAG---LREAALRVRQEMSE 384 (400)
T ss_dssp HHCHH---HHHHHHHHHHHHHT
T ss_pred HcCHH---HHHHHHHHHHHHHc
Confidence 99988 99999999999994
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.97 E-value=7.9e-31 Score=258.20 Aligned_cols=275 Identities=12% Similarity=0.068 Sum_probs=194.6
Q ss_pred HHHHHHhhcCCCCccEEEEcC-Ccch--HHHHHHHhCCCeEEEccCchhHHHHhhhhcccccCCCCC-cccccc-----h
Q 047540 31 LDLLQKLKSSSNSVSCIISDG-FMPF--TVTAAQQLGIPIALFFTIAARSFKGCMQLRTLEENTTLT-SLIDLN-----S 101 (388)
Q Consensus 31 ~~ll~~l~~~~~~~D~iI~D~-~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p-r~~~~~-----~ 101 (388)
.++++.+.+...+||+||+|. +.++ +..+|+.+|||++.+++.+...... +++...+..+.+ |+.... .
T Consensus 82 ~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~--~~p~~~~~~~~~~r~~n~~~~~~~~ 159 (416)
T 1rrv_A 82 EMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASP--HLPPAYDEPTTPGVTDIRVLWEERA 159 (416)
T ss_dssp HHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCS--SSCCCBCSCCCTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCCc--ccCCCCCCCCCchHHHHHHHHHHHH
Confidence 444444431113899999997 4566 8899999999999987766332211 111000000101 111000 0
Q ss_pred -hHHH----HHHHHHH------------hhccCCeEEEcChhhhhHHHHHHHHhhCCCceecCCcccchhhccccCCCCC
Q 047540 102 -YATR----VAIEAAK------------NAAKASAVVIHTFDALERQVLDALSAMFPNLFTIGPLQLLLNQINEQGGNSL 164 (388)
Q Consensus 102 -~~~~----~~~~~~~------------~~~~~~~~l~~s~~~le~~~l~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~ 164 (388)
..++ ....... ..... .+++++.+.|+++ ++.+ ++++|||+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~-----~~~~-~~~~vG~~~~~~~---------- 222 (416)
T 1rrv_A 160 ARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL-----QPDV-DAVQTGAWLLSDE---------- 222 (416)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC-----CSSC-CCEECCCCCCCCC----------
T ss_pred HHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC-----CCCC-CeeeECCCccCcc----------
Confidence 0000 0111111 11122 6888998888875 3344 7999999964310
Q ss_pred CCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCcc-CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhH
Q 047540 165 SSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVY-LTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEF 243 (388)
Q Consensus 165 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~ 243 (388)
++.+.++.+|++..+ ++|||++||+.. ...+.+..+++++++.+.+|+|+++..... .
T Consensus 223 ---------~~~~~~~~~~l~~~~---~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~-----~---- 281 (416)
T 1rrv_A 223 ---------RPLPPELEAFLAAGS---PPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELV-----L---- 281 (416)
T ss_dssp ---------CCCCHHHHHHHHSSS---CCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCC-----C----
T ss_pred ---------CCCCHHHHHHHhcCC---CeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCCcccc-----c----
Confidence 112467889998765 899999999864 345678889999999999999998865321 0
Q ss_pred HHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC-
Q 047540 244 EVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD- 322 (388)
Q Consensus 244 ~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~- 322 (388)
...++|+.+.+|+||.++|+++++ ||||||+||++|++++|||+|++|++.||+.||+++ ++.|+|+.+ +
T Consensus 282 -~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~-----~~ 352 (416)
T 1rrv_A 282 -PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRV-AALGIGVAH-----DG 352 (416)
T ss_dssp -SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHH-HHHTSEEEC-----SS
T ss_pred -cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHH-HHCCCccCC-----CC
Confidence 123568899999999999977777 999999999999999999999999999999999999 678999999 5
Q ss_pred CCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH
Q 047540 323 NQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAE 358 (388)
Q Consensus 323 ~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~ 358 (388)
..++.++|.++|+++ +|++ |+++++++++.++
T Consensus 353 ~~~~~~~l~~~i~~l-~~~~---~~~~~~~~~~~~~ 384 (416)
T 1rrv_A 353 PTPTFESLSAALTTV-LAPE---TRARAEAVAGMVL 384 (416)
T ss_dssp SCCCHHHHHHHHHHH-TSHH---HHHHHHHHTTTCC
T ss_pred CCCCHHHHHHHHHHh-hCHH---HHHHHHHHHHHHh
Confidence 578999999999999 8887 9999999988777
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.97 E-value=3.2e-30 Score=253.10 Aligned_cols=259 Identities=14% Similarity=0.131 Sum_probs=186.2
Q ss_pred CccEEEEcCCcchH---HHHHHHhCCCeEEEccCchhHHHHhhhh-cccccCCCCCcccccchhHHHHHHHHHHhh----
Q 047540 43 SVSCIISDGFMPFT---VTAAQQLGIPIALFFTIAARSFKGCMQL-RTLEENTTLTSLIDLNSYATRVAIEAAKNA---- 114 (388)
Q Consensus 43 ~~D~iI~D~~~~~~---~~~A~~lgIP~v~~~~~~~~~~~~~~~~-~~~~~~~~~pr~~~~~~~~~~~~~~~~~~~---- 114 (388)
+||+||+|...+++ ..+|+.+|||++.+..++.......... +..... .....+.+........+
T Consensus 92 ~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~lgl~~ 164 (404)
T 3h4t_A 92 GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQ-------GADRLFGDAVNSHRASIGLPP 164 (404)
T ss_dssp TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHH-------HHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHH-------HHHHHhHHHHHHHHHHcCCCC
Confidence 79999999765544 7899999999998877765322211000 000000 00000000011111100
Q ss_pred -------ccCCeEEEcChhhhhHHHHHHHHhhCCCceecCCcccchhhccccCCCCCCCCCCCCCCcccchHHHHHhcCC
Q 047540 115 -------AKASAVVIHTFDALERQVLDALSAMFPNLFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQWLDSK 187 (388)
Q Consensus 115 -------~~~~~~l~~s~~~le~~~l~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 187 (388)
...+..+.+..+.+.+. ++..++++++|++..... . ..++++.+|++..
T Consensus 165 ~~~~~~~~~~~~~l~~~~~~l~p~-----~~~~~~~~~~G~~~~~~~------------~-------~~~~~l~~~l~~~ 220 (404)
T 3h4t_A 165 VEHLYDYGYTDQPWLAADPVLSPL-----RPTDLGTVQTGAWILPDQ------------R-------PLSAELEGFLRAG 220 (404)
T ss_dssp CCCHHHHHHCSSCEECSCTTTSCC-----CTTCCSCCBCCCCCCCCC------------C-------CCCHHHHHHHHTS
T ss_pred CcchhhccccCCeEEeeCcceeCC-----CCCCCCeEEeCccccCCC------------C-------CCCHHHHHHHhcC
Confidence 01233455665556554 344458899998754221 0 1246788999855
Q ss_pred CCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCC
Q 047540 188 ELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPA 267 (388)
Q Consensus 188 ~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~ 267 (388)
+ ++|||++||+.. ..+.+..+++++++.+.+++|..+...... + ..++|+.+.+|+||.++|.+++
T Consensus 221 ~---~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~~----~------~~~~~v~~~~~~~~~~ll~~~d 286 (404)
T 3h4t_A 221 S---PPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLGR----I------DEGDDCLVVGEVNHQVLFGRVA 286 (404)
T ss_dssp S---CCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCCC----S------SCCTTEEEESSCCHHHHGGGSS
T ss_pred C---CeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCccccc----c------cCCCCEEEecCCCHHHHHhhCc
Confidence 4 899999999976 667888999999999999999988643211 1 1256899999999999999888
Q ss_pred cceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC-CCCCHHHHHHHHHHHHcCchHHHH
Q 047540 268 VGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD-NQVGRNEVEKLVRELMEGEKGMQM 346 (388)
Q Consensus 268 ~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~l~~ai~~vl~~~~~~~~ 346 (388)
+ ||||||+||+.|++++|||+|++|++.||+.||+++ ++.|+|+.+ + ..++.+.|.++|+++++ ++ |
T Consensus 287 ~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~-~~~G~g~~l-----~~~~~~~~~l~~ai~~ll~-~~---~ 354 (404)
T 3h4t_A 287 A--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRV-ADLGVGVAH-----DGPTPTVESLSAALATALT-PG---I 354 (404)
T ss_dssp E--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HHHTSEEEC-----SSSSCCHHHHHHHHHHHTS-HH---H
T ss_pred E--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHH-HHCCCEecc-----CcCCCCHHHHHHHHHHHhC-HH---H
Confidence 7 999999999999999999999999999999999999 678999999 5 67899999999999998 76 9
Q ss_pred HHHHHHHHHHHH
Q 047540 347 RNKASEWKRFAE 358 (388)
Q Consensus 347 ~~~a~~l~~~~~ 358 (388)
+++++++++.++
T Consensus 355 ~~~~~~~~~~~~ 366 (404)
T 3h4t_A 355 RARAAAVAGTIR 366 (404)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHHHHh
Confidence 999999998877
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.97 E-value=1.3e-28 Score=241.82 Aligned_cols=278 Identities=13% Similarity=0.106 Sum_probs=195.0
Q ss_pred cHHHHHHHHHhhcCCCCccEEEEc-CCcchHHHHHHHhCCCeEEEccCchhHHHHhhhhccccc--CCCCCcccccchhH
Q 047540 27 LQPFLDLLQKLKSSSNSVSCIISD-GFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTLEE--NTTLTSLIDLNSYA 103 (388)
Q Consensus 27 ~~~~~~ll~~l~~~~~~~D~iI~D-~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~--~~~~pr~~~~~~~~ 103 (388)
...+.++.+.+++. +||+||+| .+.+++..+|+.+|||++.+.+....... +...+...+ ....|+ .....
T Consensus 104 ~~~~~~l~~~l~~~--~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~~~~~~~~~p~---~~~~~ 177 (415)
T 3rsc_A 104 VSVLRATAEALDGD--VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSFSQDMVTLAGTIDPL---DLPVF 177 (415)
T ss_dssp HHHHHHHHHHHSSS--CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCHHHHHHHHHTCCCGG---GCHHH
T ss_pred HHHHHHHHHHHhcc--CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-cccccccccccccCChh---hHHHH
Confidence 34445555666555 99999999 78889999999999999988644321100 000000000 000000 00111
Q ss_pred HHHHHHHHHh----------hccC-CeEEEcChhhhhHHHHHHHHhhC-CCceecCCcccchhhccccCCCCCCCCCCCC
Q 047540 104 TRVAIEAAKN----------AAKA-SAVVIHTFDALERQVLDALSAMF-PNLFTIGPLQLLLNQINEQGGNSLSSTGYKY 171 (388)
Q Consensus 104 ~~~~~~~~~~----------~~~~-~~~l~~s~~~le~~~l~~~~~~~-p~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~ 171 (388)
.+.+...... .... +..++.+...+++. +..+ .++.++||+.....
T Consensus 178 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~vGp~~~~~~----------------- 235 (415)
T 3rsc_A 178 RDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA-----GDTFDDRFVFVGPCFDDRR----------------- 235 (415)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT-----GGGCCTTEEECCCCCCCCG-----------------
T ss_pred HHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC-----cccCCCceEEeCCCCCCcc-----------------
Confidence 1111111111 1112 66666665555544 4443 46899999863221
Q ss_pred CCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCc
Q 047540 172 NLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETG 251 (388)
Q Consensus 172 ~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (388)
+...|....+ ++++|||++||......+.+..+++++.+.+.+++|.++.+... + ..+..++|+
T Consensus 236 -------~~~~~~~~~~-~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~-------~-~l~~~~~~v 299 (415)
T 3rsc_A 236 -------FLGEWTRPAD-DLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVDP-------A-ALGDLPPNV 299 (415)
T ss_dssp -------GGCCCCCCSS-CCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSCG-------G-GGCCCCTTE
T ss_pred -------cCcCccccCC-CCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCCh-------H-HhcCCCCcE
Confidence 1113444444 57999999999977677788999999999899999988854211 1 111235689
Q ss_pred ccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC-CCCCHHHH
Q 047540 252 FIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD-NQVGRNEV 330 (388)
Q Consensus 252 ~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~l 330 (388)
.+.+|+|+.++|.++++ ||||||+||++|++++|+|+|++|+..||+.||+++ ++.|+|+.+ . .+++.++|
T Consensus 300 ~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l-~~~g~g~~~-----~~~~~~~~~l 371 (415)
T 3rsc_A 300 EAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRV-DQLGLGAVL-----PGEKADGDTL 371 (415)
T ss_dssp EEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHH-HHHTCEEEC-----CGGGCCHHHH
T ss_pred EEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHH-HHcCCEEEc-----ccCCCCHHHH
Confidence 99999999999999988 999999999999999999999999999999999999 678999999 5 57899999
Q ss_pred HHHHHHHHcCchHHHHHHHHHHHHHHHHH
Q 047540 331 EKLVRELMEGEKGMQMRNKASEWKRFAEE 359 (388)
Q Consensus 331 ~~ai~~vl~~~~~~~~~~~a~~l~~~~~~ 359 (388)
.++|+++|+|++ ++++++++++.+.+
T Consensus 372 ~~~i~~ll~~~~---~~~~~~~~~~~~~~ 397 (415)
T 3rsc_A 372 LAAVGAVAADPA---LLARVEAMRGHVRR 397 (415)
T ss_dssp HHHHHHHHTCHH---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCHH---HHHHHHHHHHHHHh
Confidence 999999999987 99999999999885
No 12
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.96 E-value=2.2e-28 Score=237.84 Aligned_cols=257 Identities=16% Similarity=0.156 Sum_probs=187.0
Q ss_pred HHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhhcccccCCCCCcccccchhHHHHHH
Q 047540 29 PFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTLEENTTLTSLIDLNSYATRVAI 108 (388)
Q Consensus 29 ~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~pr~~~~~~~~~~~~~ 108 (388)
.+.++++.+++. +||+||+|.+.+++..+|+.+|||++.++..+... ..+ .........
T Consensus 95 ~~~~l~~~l~~~--~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~------------~~~-------~~~~~~~~~ 153 (384)
T 2p6p_A 95 SLPRMLDFSRAW--RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA------------DGI-------HPGADAELR 153 (384)
T ss_dssp HHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC------------TTT-------HHHHHHHTH
T ss_pred HHHHHHHHHhcc--CCcEEEECcchhhHHHHHHhcCCCEEEeccCCccc------------chh-------hHHHHHHHH
Confidence 344555544444 89999999988889999999999999886433110 000 000111111
Q ss_pred HHHHhh-----ccCCeEEEcChhhhhHHHHHHHHhhC-CCceecCCcccchhhccccCCCCCCCCCCCCCCcccchHHHH
Q 047540 109 EAAKNA-----AKASAVVIHTFDALERQVLDALSAMF-PNLFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQ 182 (388)
Q Consensus 109 ~~~~~~-----~~~~~~l~~s~~~le~~~l~~~~~~~-p~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 182 (388)
...... ..++.+++++.+.++++ ++.. +++.+++ +. . +.++.+
T Consensus 154 ~~~~~~g~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~-~~--~-----------------------~~~~~~ 202 (384)
T 2p6p_A 154 PELSELGLERLPAPDLFIDICPPSLRPA-----NAAPARMMRHVA-TS--R-----------------------QCPLEP 202 (384)
T ss_dssp HHHHHTTCSSCCCCSEEEECSCGGGSCT-----TSCCCEECCCCC-CC--C-----------------------CCBCCH
T ss_pred HHHHHcCCCCCCCCCeEEEECCHHHCCC-----CCCCCCceEecC-CC--C-----------------------CCCCCc
Confidence 111111 11567888988777654 2211 1233442 10 0 112347
Q ss_pred HhcCCCCCCCcEEEeeCCCccC-----CHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCccccccc
Q 047540 183 WLDSKELPNSVVYVNFGSSVYL-----TKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWC 257 (388)
Q Consensus 183 ~l~~~~~~~~~v~vs~Gs~~~~-----~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 257 (388)
|++..+ ++++|||++||.... ..+.+..+++++.+.+.+++|+.+++. .+.+ +..++|+.+ +|+
T Consensus 203 ~l~~~~-~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~--------~~~l-~~~~~~v~~-~~~ 271 (384)
T 2p6p_A 203 WMYTRD-TRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTV--------AEAL-RAEVPQARV-GWT 271 (384)
T ss_dssp HHHCCC-SSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHHH--------HHHH-HHHCTTSEE-ECC
T ss_pred hhhcCC-CCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCCC--------HHhh-CCCCCceEE-cCC
Confidence 887755 578999999998764 346788899999998999999977421 1112 235679999 999
Q ss_pred ChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC-CCCCHHHHHHHHHH
Q 047540 258 PQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD-NQVGRNEVEKLVRE 336 (388)
Q Consensus 258 pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~l~~ai~~ 336 (388)
||.++|+++++ ||||||+||++||+++|+|+|++|...||..||+++ ++.|+|+.+ + ..++.++|.++|++
T Consensus 272 ~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~-~~~g~g~~~-----~~~~~~~~~l~~~i~~ 343 (384)
T 2p6p_A 272 PLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRV-ADYGAAIAL-----LPGEDSTEAIADSCQE 343 (384)
T ss_dssp CHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEEC-----CTTCCCHHHHHHHHHH
T ss_pred CHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHH-HHCCCeEec-----CcCCCCHHHHHHHHHH
Confidence 99999988887 999999999999999999999999999999999999 678999999 5 56899999999999
Q ss_pred HHcCchHHHHHHHHHHHHHHHHH
Q 047540 337 LMEGEKGMQMRNKASEWKRFAEE 359 (388)
Q Consensus 337 vl~~~~~~~~~~~a~~l~~~~~~ 359 (388)
+|+|++ |+++++++++.+++
T Consensus 344 ll~~~~---~~~~~~~~~~~~~~ 363 (384)
T 2p6p_A 344 LQAKDT---YARRAQDLSREISG 363 (384)
T ss_dssp HHHCHH---HHHHHHHHHHHHHT
T ss_pred HHcCHH---HHHHHHHHHHHHHh
Confidence 999987 99999999999983
No 13
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.96 E-value=7.3e-28 Score=234.82 Aligned_cols=290 Identities=14% Similarity=0.152 Sum_probs=199.6
Q ss_pred cHHHHHHH-HHhccccHHHHHHHHHhhcCCCCccEEEEc-CCcchHHHHHHHhCCCeEEEccCchhHHHHhhhhccccc-
Q 047540 13 DANSLFES-ITNNVMLQPFLDLLQKLKSSSNSVSCIISD-GFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTLEE- 89 (388)
Q Consensus 13 d~~~~~~~-~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D-~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~- 89 (388)
+....+.. +... ....+.++.+.+++. +||+||+| .+.+++..+|+.+|||++.+.+....... +...+...+
T Consensus 74 ~~~~~~~~~~~~~-~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~~~~ 149 (402)
T 3ia7_A 74 DAETQLHLVYVRE-NVAILRAAEEALGDN--PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH-YSLFKELWKS 149 (402)
T ss_dssp THHHHHHHHHHHH-HHHHHHHHHHHHTTC--CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT-BCHHHHHHHH
T ss_pred chHHHHHHHHHHH-HHHHHHHHHHHHhcc--CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc-cccccccccc
Confidence 34444444 4444 445556666666555 99999999 78889999999999999988644321100 000000000
Q ss_pred -CCCCCcccccchhHHHHHHHHHHh----------hccC-CeEEEcChhhhhHHHHHHHHhhC-CCceecCCcccchhhc
Q 047540 90 -NTTLTSLIDLNSYATRVAIEAAKN----------AAKA-SAVVIHTFDALERQVLDALSAMF-PNLFTIGPLQLLLNQI 156 (388)
Q Consensus 90 -~~~~pr~~~~~~~~~~~~~~~~~~----------~~~~-~~~l~~s~~~le~~~l~~~~~~~-p~~~~vGpl~~~~~~~ 156 (388)
....|+ ......+.+...... .... +..++.+...+++. ...+ .++.++||+.....
T Consensus 150 ~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~vGp~~~~~~-- 219 (402)
T 3ia7_A 150 NGQRHPA---DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF-----AETFDERFAFVGPTLTGRD-- 219 (402)
T ss_dssp HTCCCGG---GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-----GGGCCTTEEECCCCCCC----
T ss_pred ccccChh---hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-----cccCCCCeEEeCCCCCCcc--
Confidence 000000 000111111111111 1112 55666665555544 3433 47899999753221
Q ss_pred cccCCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCC
Q 047540 157 NEQGGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGET 236 (388)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~ 236 (388)
....|+...+ ++++||+++||......+.+..+++++.+.+..++|.++.+...
T Consensus 220 ----------------------~~~~~~~~~~-~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--- 273 (402)
T 3ia7_A 220 ----------------------GQPGWQPPRP-DAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDP--- 273 (402)
T ss_dssp ------------------------CCCCCSST-TCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCG---
T ss_pred ----------------------cCCCCcccCC-CCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCCh---
Confidence 0113444444 57999999999987777788999999998889999988854211
Q ss_pred CCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCC-ccchhHhHHHHhhhhceeEE
Q 047540 237 ADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPF-LGDQATNCRYTCNEWGVGMD 315 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~-~~DQ~~na~~v~~~~G~G~~ 315 (388)
+ ...+.++|+.+.+|+|+.++|+++++ ||||||+||+.|++++|+|+|++|. ..||..||+++ ++.|+|+.
T Consensus 274 ----~-~~~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~-~~~g~g~~ 345 (402)
T 3ia7_A 274 ----A-VLGPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERV-IELGLGSV 345 (402)
T ss_dssp ----G-GGCSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHH-HHTTSEEE
T ss_pred ----h-hhCCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHH-HHcCCEEE
Confidence 1 11124568999999999999999988 9999999999999999999999999 99999999999 67899999
Q ss_pred eeecCCC-CCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH
Q 047540 316 ITNSGDD-NQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAE 358 (388)
Q Consensus 316 l~~~~~~-~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~ 358 (388)
+ . .+++.+.|.++|+++|+|++ ++++++++++.+.
T Consensus 346 ~-----~~~~~~~~~l~~~~~~ll~~~~---~~~~~~~~~~~~~ 381 (402)
T 3ia7_A 346 L-----RPDQLEPASIREAVERLAADSA---VRERVRRMQRDIL 381 (402)
T ss_dssp C-----CGGGCSHHHHHHHHHHHHHCHH---HHHHHHHHHHHHH
T ss_pred c-----cCCCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHh
Confidence 9 5 57899999999999999987 9999999998887
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.96 E-value=1.4e-28 Score=244.01 Aligned_cols=274 Identities=12% Similarity=0.097 Sum_probs=180.6
Q ss_pred HHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhhcccccCCCCCcccccchhHHHHHH
Q 047540 29 PFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTLEENTTLTSLIDLNSYATRVAI 108 (388)
Q Consensus 29 ~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~pr~~~~~~~~~~~~~ 108 (388)
.+.++++.+++. +||+||+|.+++++..+|+.+|||++.+...+.........+... ..+.+.. .......+.+.
T Consensus 132 ~~~~l~~~~~~~--~pDlVv~d~~~~~~~~aA~~lgiP~v~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~l~ 206 (441)
T 2yjn_A 132 LIEGMVSFCRKW--RPDLVIWEPLTFAAPIAAAVTGTPHARLLWGPDITTRARQNFLGL--LPDQPEE-HREDPLAEWLT 206 (441)
T ss_dssp HHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHHTCCEEEECSSCCHHHHHHHHHHHH--GGGSCTT-TCCCHHHHHHH
T ss_pred HHHHHHHHHHhc--CCCEEEecCcchhHHHHHHHcCCCEEEEecCCCcchhhhhhhhhh--ccccccc-cccchHHHHHH
Confidence 666676666554 899999999888999999999999999865443211111000000 0011100 01111222222
Q ss_pred HHHHhhcc---------CCeEEEcChhhhhHHHHHHHHhhCCCceecCCcccchhhccccCCCCCCCCCCCCCCcccchH
Q 047540 109 EAAKNAAK---------ASAVVIHTFDALERQVLDALSAMFPNLFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETE 179 (388)
Q Consensus 109 ~~~~~~~~---------~~~~l~~s~~~le~~~l~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (388)
...+.+.. .+..+.++.+.++++ . .+|. ..+++.... .+.+
T Consensus 207 ~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~-----~-~~~~-~~~~~~~~~-----------------------~~~~ 256 (441)
T 2yjn_A 207 WTLEKYGGPAFDEEVVVGQWTIDPAPAAIRLD-----T-GLKT-VGMRYVDYN-----------------------GPSV 256 (441)
T ss_dssp HHHHHTTCCCCCGGGTSCSSEEECSCGGGSCC-----C-CCCE-EECCCCCCC-----------------------SSCC
T ss_pred HHHHHcCCCCCCccccCCCeEEEecCccccCC-----C-CCCC-CceeeeCCC-----------------------CCcc
Confidence 22222211 233444433333321 1 1110 111111000 1123
Q ss_pred HHHHhcCCCCCCCcEEEeeCCCccC---CHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccc
Q 047540 180 CLQWLDSKELPNSVVYVNFGSSVYL---TKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARW 256 (388)
Q Consensus 180 l~~~l~~~~~~~~~v~vs~Gs~~~~---~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 256 (388)
+.+|++..+ ++++|||++||+... ..+.+..+++++.+.+.+++|+.+++... .+. ..++|+.+.+|
T Consensus 257 ~~~~l~~~~-~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~----~l~-----~~~~~v~~~~~ 326 (441)
T 2yjn_A 257 VPEWLHDEP-ERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLE----GVA-----NIPDNVRTVGF 326 (441)
T ss_dssp CCGGGSSCC-SSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTTS----SCS-----SCCSSEEECCS
T ss_pred cchHhhcCC-CCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchh----hhc-----cCCCCEEEecC
Confidence 457888666 679999999998753 23557778899988899999998854311 111 13568999999
Q ss_pred cChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC-CCCCHHHHHHHHH
Q 047540 257 CPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD-NQVGRNEVEKLVR 335 (388)
Q Consensus 257 ~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~l~~ai~ 335 (388)
+||.++|+++++ ||||||+||++|++++|||+|++|+..||..||+++ ++.|+|+.+ + .+++.++|.++|+
T Consensus 327 ~~~~~ll~~ad~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~-----~~~~~~~~~l~~~i~ 398 (441)
T 2yjn_A 327 VPMHALLPTCAA--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRT-QEFGAGIAL-----PVPELTPDQLRESVK 398 (441)
T ss_dssp CCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEEC-----CTTTCCHHHHHHHHH
T ss_pred CCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHH-HHcCCEEEc-----ccccCCHHHHHHHHH
Confidence 999999988887 999999999999999999999999999999999999 678999999 5 5789999999999
Q ss_pred HHHcCchHHHHHHHHHHHHHHHH
Q 047540 336 ELMEGEKGMQMRNKASEWKRFAE 358 (388)
Q Consensus 336 ~vl~~~~~~~~~~~a~~l~~~~~ 358 (388)
++|+|++ |+++++++++.++
T Consensus 399 ~ll~~~~---~~~~~~~~~~~~~ 418 (441)
T 2yjn_A 399 RVLDDPA---HRAGAARMRDDML 418 (441)
T ss_dssp HHHHCHH---HHHHHHHHHHHHH
T ss_pred HHhcCHH---HHHHHHHHHHHHH
Confidence 9999987 9999999999888
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.96 E-value=1.4e-27 Score=235.66 Aligned_cols=292 Identities=15% Similarity=0.131 Sum_probs=195.7
Q ss_pred cHHHHHHHHHhccccHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhhcccccCCC
Q 047540 13 DANSLFESITNNVMLQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTLEENTT 92 (388)
Q Consensus 13 d~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~ 92 (388)
++...+..+... +...+..+.+.+++. +||+||+|.+.+++..+|+.+|||++.+++....... +...+. ..+
T Consensus 77 ~~~~~~~~~~~~-~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~-~~~~~~---~~~ 149 (430)
T 2iyf_A 77 TLLDNVEPFLND-AIQALPQLADAYADD--IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKG-YEEEVA---EPM 149 (430)
T ss_dssp SHHHHHHHHHHH-HHHHHHHHHHHHTTS--CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTT-HHHHTH---HHH
T ss_pred hhHHHHHHHHHH-HHHHHHHHHHHhhcc--CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccc-cccccc---cch
Confidence 333444333332 333445555555544 9999999998788999999999999998765431100 000000 000
Q ss_pred CCcccc-c-chhHHHHHHHHHH----------hhccCCeEEEcChhhhhHHHHHHHHhhCCC-ceecCCcccchhhcccc
Q 047540 93 LTSLID-L-NSYATRVAIEAAK----------NAAKASAVVIHTFDALERQVLDALSAMFPN-LFTIGPLQLLLNQINEQ 159 (388)
Q Consensus 93 ~pr~~~-~-~~~~~~~~~~~~~----------~~~~~~~~l~~s~~~le~~~l~~~~~~~p~-~~~vGpl~~~~~~~~~~ 159 (388)
.++... . ...+...+..... ....++.+++++.+.+++.. ++..++ +++|||......
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~v~~vG~~~~~~~----- 220 (430)
T 2iyf_A 150 WREPRQTERGRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA----DRVDEDVYTFVGACQGDRA----- 220 (430)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG----GGSCTTTEEECCCCC---------
T ss_pred hhhhccchHHHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc----ccCCCccEEEeCCcCCCCC-----
Confidence 000000 0 0000011111111 11246889999988887651 233357 999998642210
Q ss_pred CCCCCCCCCCCCCCcccchHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCCCCCC
Q 047540 160 GGNSLSSTGYKYNLWKEETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNS-NHPFLWIIRPDLVTGETAD 238 (388)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~ 238 (388)
. ..+|.+..+ ++++||+++||......+.+..+++++++. +.+++|.++.....
T Consensus 221 ------~-------------~~~~~~~~~-~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~----- 275 (430)
T 2iyf_A 221 ------E-------------EGGWQRPAG-AEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP----- 275 (430)
T ss_dssp --------------------CCCCCCCTT-CSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CG-----
T ss_pred ------C-------------CCCCccccC-CCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCCh-----
Confidence 0 013444344 568999999998854567888899999885 78888888754211
Q ss_pred CchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeee
Q 047540 239 MPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITN 318 (388)
Q Consensus 239 ~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~ 318 (388)
+.+ +..++|+.+.+|+||.++|+++++ ||+|||+||++||+++|+|+|++|..+||..|++++ ++.|+|+.+
T Consensus 276 --~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~-~~~g~g~~~-- 347 (430)
T 2iyf_A 276 --AEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADML-QGLGVARKL-- 347 (430)
T ss_dssp --GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHTTSEEEC--
T ss_pred --HHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHH-HHcCCEEEc--
Confidence 111 123568899999999999999998 999999999999999999999999999999999999 678999999
Q ss_pred cCCC-CCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH
Q 047540 319 SGDD-NQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEE 359 (388)
Q Consensus 319 ~~~~-~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~ 359 (388)
. ..++.++|.++|+++|+|++ +++++.++++.+++
T Consensus 348 ---~~~~~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 348 ---ATEEATADLLRETALALVDDPE---VARRLRRIQAEMAQ 383 (430)
T ss_dssp ---CCC-CCHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHH
T ss_pred ---CCCCCCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHh
Confidence 5 56899999999999999987 89999988888775
No 16
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=3e-26 Score=197.68 Aligned_cols=160 Identities=23% Similarity=0.438 Sum_probs=136.8
Q ss_pred chHHHHHhcCCCCCCCcEEEeeCCCc-cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCccccc
Q 047540 177 ETECLQWLDSKELPNSVVYVNFGSSV-YLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIAR 255 (388)
Q Consensus 177 ~~~l~~~l~~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 255 (388)
+.++.+|++..+ ++++|||++||.. ....+.+..+++++.+.+.+++|+.++... + ..++|+.+.+
T Consensus 8 ~~~~~~~l~~~~-~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~--------~----~~~~~v~~~~ 74 (170)
T 2o6l_A 8 PKEMEDFVQSSG-ENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKP--------D----TLGLNTRLYK 74 (170)
T ss_dssp CHHHHHHHHTTT-TTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCC--------T----TCCTTEEEES
T ss_pred CHHHHHHHHcCC-CCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCc--------c----cCCCcEEEec
Confidence 468999998876 6799999999986 346678899999999889999999875421 1 1245889999
Q ss_pred ccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC-CCCCHHHHHHHH
Q 047540 256 WCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD-NQVGRNEVEKLV 334 (388)
Q Consensus 256 ~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~l~~ai 334 (388)
|+||.+++.|+++.+||||||++|++|++++|+|+|++|+..||..||+++ ++.|+|+.+ + ..++.++|.++|
T Consensus 75 ~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~-----~~~~~~~~~l~~~i 148 (170)
T 2o6l_A 75 WIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRV-----DFNTMSSTDLLNAL 148 (170)
T ss_dssp SCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEEC-----CTTTCCHHHHHHHH
T ss_pred CCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEe-----ccccCCHHHHHHHH
Confidence 999999997777777999999999999999999999999999999999999 678999999 5 568999999999
Q ss_pred HHHHcCchHHHHHHHHHHHHHHHH
Q 047540 335 RELMEGEKGMQMRNKASEWKRFAE 358 (388)
Q Consensus 335 ~~vl~~~~~~~~~~~a~~l~~~~~ 358 (388)
+++++|++ |+++++++++.++
T Consensus 149 ~~ll~~~~---~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 149 KRVINDPS---YKENVMKLSRIQH 169 (170)
T ss_dssp HHHHHCHH---HHHHHHHHC----
T ss_pred HHHHcCHH---HHHHHHHHHHHhh
Confidence 99999987 9999999999887
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.93 E-value=2.6e-25 Score=217.18 Aligned_cols=157 Identities=17% Similarity=0.267 Sum_probs=121.6
Q ss_pred HHHhcCCCCCCCcEEEeeCCCccC--------CHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcc
Q 047540 181 LQWLDSKELPNSVVYVNFGSSVYL--------TKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGF 252 (388)
Q Consensus 181 ~~~l~~~~~~~~~v~vs~Gs~~~~--------~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (388)
..|+...+ ++++||+++||.... ..+.+..+++++.+.+.+++|+.+++.. +.+ ...++|+.
T Consensus 218 ~~~~~~~~-~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~--------~~l-~~~~~~v~ 287 (398)
T 4fzr_A 218 PSWVFEER-KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLA--------QTL-QPLPEGVL 287 (398)
T ss_dssp CHHHHSCC-SSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC-----------------CCTTEE
T ss_pred chhhhcCC-CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcch--------hhh-ccCCCcEE
Confidence 46776665 679999999998643 2345788999999889999998875421 111 13467899
Q ss_pred cccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC-CCCCHHHHH
Q 047540 253 IARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD-NQVGRNEVE 331 (388)
Q Consensus 253 v~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~l~ 331 (388)
+.+|+|+.++|.++++ ||||||.||+.||+++|+|+|++|...||..|+.++ ++.|+|+.+ + ..++.+.|.
T Consensus 288 ~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~-~~~g~g~~~-----~~~~~~~~~l~ 359 (398)
T 4fzr_A 288 AAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLL-HAAGAGVEV-----PWEQAGVESVL 359 (398)
T ss_dssp EESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHH-HHTTSEEEC-----C-------CHH
T ss_pred EeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHH-HHcCCEEec-----CcccCCHHHHH
Confidence 9999999999999888 999999999999999999999999999999999999 678999999 5 567899999
Q ss_pred HHHHHHHcCchHHHHHHHHHHHHHHHH
Q 047540 332 KLVRELMEGEKGMQMRNKASEWKRFAE 358 (388)
Q Consensus 332 ~ai~~vl~~~~~~~~~~~a~~l~~~~~ 358 (388)
++|+++|+|++ +++++++.++.+.
T Consensus 360 ~ai~~ll~~~~---~~~~~~~~~~~~~ 383 (398)
T 4fzr_A 360 AACARIRDDSS---YVGNARRLAAEMA 383 (398)
T ss_dssp HHHHHHHHCTH---HHHHHHHHHHHHT
T ss_pred HHHHHHHhCHH---HHHHHHHHHHHHH
Confidence 99999999998 9999999998887
No 18
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.92 E-value=2.6e-24 Score=210.17 Aligned_cols=153 Identities=16% Similarity=0.211 Sum_probs=128.0
Q ss_pred HHhcCCCCCCCcEEEeeCCCccC--CHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccCh
Q 047540 182 QWLDSKELPNSVVYVNFGSSVYL--TKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQ 259 (388)
Q Consensus 182 ~~l~~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq 259 (388)
.|+...+ ++++||+++||.... ..+.+..+++++.+.+.+++|+.+++.. +.+ +..++|+.+.+|+|+
T Consensus 224 ~~~~~~~-~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~--------~~l-~~~~~~v~~~~~~~~ 293 (398)
T 3oti_A 224 DRLPPVP-ARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDI--------SPL-GTLPRNVRAVGWTPL 293 (398)
T ss_dssp SSCCCCC-SSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCC--------GGG-CSCCTTEEEESSCCH
T ss_pred hhhhcCC-CCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcCh--------hhh-ccCCCcEEEEccCCH
Confidence 4665555 679999999998543 4566888999999889999999886531 111 123568999999999
Q ss_pred HhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhH--HHHhhhhceeEEeeecCCC-CCCCHHHHHHHHHH
Q 047540 260 EEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNC--RYTCNEWGVGMDITNSGDD-NQVGRNEVEKLVRE 336 (388)
Q Consensus 260 ~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na--~~v~~~~G~G~~l~~~~~~-~~~~~~~l~~ai~~ 336 (388)
.++|.++++ ||||||.||+.||+++|+|+|++|+..||..|| .++ ++.|+|+.+ + .+.+.+.+. +
T Consensus 294 ~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~-~~~g~g~~~-----~~~~~~~~~l~----~ 361 (398)
T 3oti_A 294 HTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAV-SRRGIGLVS-----TSDKVDADLLR----R 361 (398)
T ss_dssp HHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHH-HHHTSEEEC-----CGGGCCHHHHH----H
T ss_pred HHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHH-HHCCCEEee-----CCCCCCHHHHH----H
Confidence 999999888 999999999999999999999999999999999 998 678999999 5 566777776 7
Q ss_pred HHcCchHHHHHHHHHHHHHHHHH
Q 047540 337 LMEGEKGMQMRNKASEWKRFAEE 359 (388)
Q Consensus 337 vl~~~~~~~~~~~a~~l~~~~~~ 359 (388)
+|+|++ |+++++++++.+.+
T Consensus 362 ll~~~~---~~~~~~~~~~~~~~ 381 (398)
T 3oti_A 362 LIGDES---LRTAAREVREEMVA 381 (398)
T ss_dssp HHHCHH---HHHHHHHHHHHHHT
T ss_pred HHcCHH---HHHHHHHHHHHHHh
Confidence 888987 99999999999883
No 19
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.92 E-value=1.7e-23 Score=203.65 Aligned_cols=155 Identities=15% Similarity=0.190 Sum_probs=129.2
Q ss_pred HHhcCCCCCCCcEEEeeCCCcc--CC-HHHHHHHHHHHhcC-CCCEEEEEcCCCCCCCCCCCchhHHHhhhcCccccccc
Q 047540 182 QWLDSKELPNSVVYVNFGSSVY--LT-KQQLTEVAMGLVNS-NHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWC 257 (388)
Q Consensus 182 ~~l~~~~~~~~~v~vs~Gs~~~--~~-~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 257 (388)
.|+...+ ++++|++++||... .. .+.+..++++ .+. +.+++|..+++.. +.+ ...++|+.+.+|+
T Consensus 210 ~~~~~~~-~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~--------~~l-~~~~~~v~~~~~~ 278 (391)
T 3tsa_A 210 AWGAART-SARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHR--------ALL-TDLPDNARIAESV 278 (391)
T ss_dssp GGGSSCC-SSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGG--------GGC-TTCCTTEEECCSC
T ss_pred chhhcCC-CCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcch--------hhc-ccCCCCEEEeccC
Confidence 5666555 67999999999843 23 6678888888 777 7788888775421 111 1235688999999
Q ss_pred ChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCC---CCCHHHHHHHH
Q 047540 258 PQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDN---QVGRNEVEKLV 334 (388)
Q Consensus 258 pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~---~~~~~~l~~ai 334 (388)
|+.++|.++++ ||||||.||+.||+++|+|+|++|...||..|+.++ ++.|+|+.+ .. ..+.+.|.++|
T Consensus 279 ~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~-~~~g~g~~~-----~~~~~~~~~~~l~~ai 350 (391)
T 3tsa_A 279 PLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNL-AAAGAGICL-----PDEQAQSDHEQFTDSI 350 (391)
T ss_dssp CGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHH-HHTTSEEEC-----CSHHHHTCHHHHHHHH
T ss_pred CHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHH-HHcCCEEec-----CcccccCCHHHHHHHH
Confidence 99999988888 999999999999999999999999999999999999 678999999 42 47899999999
Q ss_pred HHHHcCchHHHHHHHHHHHHHHHH
Q 047540 335 RELMEGEKGMQMRNKASEWKRFAE 358 (388)
Q Consensus 335 ~~vl~~~~~~~~~~~a~~l~~~~~ 358 (388)
.++|+|++ +++++.++++.+.
T Consensus 351 ~~ll~~~~---~~~~~~~~~~~~~ 371 (391)
T 3tsa_A 351 ATVLGDTG---FAAAAIKLSDEIT 371 (391)
T ss_dssp HHHHTCTH---HHHHHHHHHHHHH
T ss_pred HHHHcCHH---HHHHHHHHHHHHH
Confidence 99999998 9999999998887
No 20
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.90 E-value=1e-21 Score=192.15 Aligned_cols=151 Identities=23% Similarity=0.365 Sum_probs=130.0
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcc
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVG 269 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~ 269 (388)
++++|++++||......+.+..+++++.+.+..++|+.++...... +. ..++|+.+.+|+|+.++|.++++
T Consensus 241 ~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~---l~-----~~~~~v~~~~~~~~~~~l~~ad~- 311 (412)
T 3otg_A 241 ARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDVSG---LG-----EVPANVRLESWVPQAALLPHVDL- 311 (412)
T ss_dssp TSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTT---CC-----CCCTTEEEESCCCHHHHGGGCSE-
T ss_pred CCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCChhh---hc-----cCCCcEEEeCCCCHHHHHhcCcE-
Confidence 5689999999987556778889999999889999999886531111 11 13468899999999999999998
Q ss_pred eeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC-CCCCHHHHHHHHHHHHcCchHHHHHH
Q 047540 270 GFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD-NQVGRNEVEKLVRELMEGEKGMQMRN 348 (388)
Q Consensus 270 ~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~l~~ai~~vl~~~~~~~~~~ 348 (388)
||+|||++|++||+++|+|+|++|...||..|+..+ ++.|+|..+ . ..++.++|.++|.++|+|++ +++
T Consensus 312 -~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v-~~~g~g~~~-----~~~~~~~~~l~~ai~~ll~~~~---~~~ 381 (412)
T 3otg_A 312 -VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAV-AQAGAGDHL-----LPDNISPDSVSGAAKRLLAEES---YRA 381 (412)
T ss_dssp -EEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HHHTSEEEC-----CGGGCCHHHHHHHHHHHHHCHH---HHH
T ss_pred -EEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHH-HHcCCEEec-----CcccCCHHHHHHHHHHHHhCHH---HHH
Confidence 999999999999999999999999999999999999 678999999 5 56799999999999999987 898
Q ss_pred HHHHHHHHHHH
Q 047540 349 KASEWKRFAEE 359 (388)
Q Consensus 349 ~a~~l~~~~~~ 359 (388)
++.+.++.+.+
T Consensus 382 ~~~~~~~~~~~ 392 (412)
T 3otg_A 382 GARAVAAEIAA 392 (412)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 88888888774
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.78 E-value=1.6e-17 Score=160.50 Aligned_cols=136 Identities=13% Similarity=0.088 Sum_probs=104.3
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHHhcC----CCCEEEEEcCCCCCCCCCCCchhHH---HhhhcCcccccccChHh-
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGLVNS----NHPFLWIIRPDLVTGETADMPSEFE---VKAKETGFIARWCPQEE- 261 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~iw~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~pq~~- 261 (388)
++++|+|..||.+.... .+.+.+++... +..++|..+.+. .+... ...+.++.+.+|++++.
T Consensus 179 ~~~~ilv~gGs~g~~~~--~~~~~~al~~l~~~~~~~vi~~~G~~~--------~~~~~~~~~~~~~~~~v~~f~~dm~~ 248 (365)
T 3s2u_A 179 RRVNLLVLGGSLGAEPL--NKLLPEALAQVPLEIRPAIRHQAGRQH--------AEITAERYRTVAVEADVAPFISDMAA 248 (365)
T ss_dssp SCCEEEECCTTTTCSHH--HHHHHHHHHTSCTTTCCEEEEECCTTT--------HHHHHHHHHHTTCCCEEESCCSCHHH
T ss_pred CCcEEEEECCcCCcccc--chhhHHHHHhcccccceEEEEecCccc--------cccccceecccccccccccchhhhhh
Confidence 45899999999875433 23345555543 345677776442 12222 23355778899999975
Q ss_pred hhcCCCcceeeeccCchhHHHHHhhCCcEEecCCc----cchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHH
Q 047540 262 VLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFL----GDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVREL 337 (388)
Q Consensus 262 ~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~----~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~v 337 (388)
+|+.+++ +|||+|.+|+.|++++|+|+|.+|+- .+|..||+.+ ++.|+|+.+. +++++.+.|.++|.++
T Consensus 249 ~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l-~~~G~a~~l~----~~~~~~~~L~~~i~~l 321 (365)
T 3s2u_A 249 AYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFL-VRSGAGRLLP----QKSTGAAELAAQLSEV 321 (365)
T ss_dssp HHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHH-HTTTSEEECC----TTTCCHHHHHHHHHHH
T ss_pred hhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHH-HHCCCEEEee----cCCCCHHHHHHHHHHH
Confidence 9999999 99999999999999999999999973 5899999999 6689999992 3789999999999999
Q ss_pred HcCch
Q 047540 338 MEGEK 342 (388)
Q Consensus 338 l~~~~ 342 (388)
|+|++
T Consensus 322 l~d~~ 326 (365)
T 3s2u_A 322 LMHPE 326 (365)
T ss_dssp HHCTH
T ss_pred HCCHH
Confidence 99986
No 22
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.56 E-value=6.8e-15 Score=131.36 Aligned_cols=130 Identities=12% Similarity=0.120 Sum_probs=94.4
Q ss_pred CCCcEEEeeCCCccCCHHHHHHH-----HHHHhcCC-CCEEEEEcCCCCCCCCCCCchhHHHhh----------------
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEV-----AMGLVNSN-HPFLWIIRPDLVTGETADMPSEFEVKA---------------- 247 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~-----~~al~~~~-~~~iw~~~~~~~~~~~~~~~~~~~~~~---------------- 247 (388)
++++|||++||.... .+.+..+ +.+|.+.+ .++++.+|..... .........
T Consensus 27 ~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-----~~~~~~~~~~~~~~~~l~p~~~~~~ 100 (224)
T 2jzc_A 27 EEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-----EFEHLVQERGGQRESQKIPIDQFGC 100 (224)
T ss_dssp CSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-----CCCSHHHHHTCEECSCCCSSCTTCT
T ss_pred CCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-----hHHHHHHhhhccccccccccccccc
Confidence 579999999997422 3333333 48888877 7999999866431 011111111
Q ss_pred ----------hc--CcccccccChH-hhhc-CCCcceeeeccCchhHHHHHhhCCcEEecCCc----cchhHhHHHHhhh
Q 047540 248 ----------KE--TGFIARWCPQE-EVLN-HPAVGGFFTHSGWNSTIESLCAGVPMICWPFL----GDQATNCRYTCNE 309 (388)
Q Consensus 248 ----------~~--~~~v~~~~pq~-~~L~-~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~----~DQ~~na~~v~~~ 309 (388)
.. ++.+.+|++++ .+|+ .+++ +|||||+||++|++++|+|+|++|+. .||..||+++ ++
T Consensus 101 ~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l-~~ 177 (224)
T 2jzc_A 101 GDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF-VE 177 (224)
T ss_dssp TCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH-HH
T ss_pred cccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH-HH
Confidence 01 33467888887 5999 9999 99999999999999999999999984 4699999999 66
Q ss_pred hceeEEeeecCCCCCCCHHHHHHHHHHH
Q 047540 310 WGVGMDITNSGDDNQVGRNEVEKLVREL 337 (388)
Q Consensus 310 ~G~G~~l~~~~~~~~~~~~~l~~ai~~v 337 (388)
.|+++.+ +.+.|.++|+++
T Consensus 178 ~G~~~~~---------~~~~L~~~i~~l 196 (224)
T 2jzc_A 178 LGYVWSC---------APTETGLIAGLR 196 (224)
T ss_dssp HSCCCEE---------CSCTTTHHHHHH
T ss_pred CCCEEEc---------CHHHHHHHHHHH
Confidence 8998766 345666677666
No 23
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.42 E-value=6.9e-12 Score=119.92 Aligned_cols=133 Identities=16% Similarity=0.081 Sum_probs=97.8
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHHhcC--CCCEEEEEcCCCCCCCCCCCchhHHHh---hh-cCcccccccCh-Hhh
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGLVNS--NHPFLWIIRPDLVTGETADMPSEFEVK---AK-ETGFIARWCPQ-EEV 262 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~~~~~~~~~~---~~-~~~~v~~~~pq-~~~ 262 (388)
++++|++..|+... .+....+++++... +.++++.+|... .+.+.+. .+ +++.+.+|+++ ..+
T Consensus 182 ~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~--------~~~l~~~~~~~~~~~v~~~g~~~~~~~~ 251 (364)
T 1f0k_A 182 GPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS--------QQSVEQAYAEAGQPQHKVTEFIDDMAAA 251 (364)
T ss_dssp SSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC--------HHHHHHHHHHTTCTTSEEESCCSCHHHH
T ss_pred CCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch--------HHHHHHHHhhcCCCceEEecchhhHHHH
Confidence 34678888888643 34444455555443 456667776542 1222222 22 47888999865 559
Q ss_pred hcCCCcceeeeccCchhHHHHHhhCCcEEecCCc---cchhHhHHHHhhhhceeEEeeecCCC-CCCCHHHHHHHHHHHH
Q 047540 263 LNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFL---GDQATNCRYTCNEWGVGMDITNSGDD-NQVGRNEVEKLVRELM 338 (388)
Q Consensus 263 L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~---~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~l~~ai~~vl 338 (388)
|+.+++ ||+++|.++++||+++|+|+|+.|.. .||..|+..+ .+.|.|..+ + .+.+.+++.++|.++
T Consensus 252 ~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~-~~~g~g~~~-----~~~d~~~~~la~~i~~l- 322 (364)
T 1f0k_A 252 YAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPL-EKAGAAKII-----EQPQLSVDAVANTLAGW- 322 (364)
T ss_dssp HHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHH-HHTTSEEEC-----CGGGCCHHHHHHHHHTC-
T ss_pred HHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHH-HhCCcEEEe-----ccccCCHHHHHHHHHhc-
Confidence 999998 99999988999999999999999987 7899999998 567999998 5 456799999999988
Q ss_pred cCch
Q 047540 339 EGEK 342 (388)
Q Consensus 339 ~~~~ 342 (388)
|++
T Consensus 323 -~~~ 325 (364)
T 1f0k_A 323 -SRE 325 (364)
T ss_dssp -CHH
T ss_pred -CHH
Confidence 654
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.02 E-value=9.1e-10 Score=101.91 Aligned_cols=113 Identities=8% Similarity=0.034 Sum_probs=87.1
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhh--hcCcccccccChHh-hhcCCC
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKA--KETGFIARWCPQEE-VLNHPA 267 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~pq~~-~L~~~~ 267 (388)
.+.|+|++|..... +....++++|.... ++.++.+.+.. ..+.+.+.. ..|+.+..|++++. ++..++
T Consensus 157 ~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~~------~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aD 227 (282)
T 3hbm_A 157 KYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSNP------NLKKLQKFAKLHNNIRLFIDHENIAKLMNESN 227 (282)
T ss_dssp CEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTCT------THHHHHHHHHTCSSEEEEESCSCHHHHHHTEE
T ss_pred CCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCch------HHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCC
Confidence 46899999875432 35566788886654 57777765521 122232222 24788899999986 999999
Q ss_pred cceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEe
Q 047540 268 VGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDI 316 (388)
Q Consensus 268 ~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l 316 (388)
+ +||+|| +|+.|+++.|+|+|.+|+..+|..||+.+ ++.|+++.+
T Consensus 228 l--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l-~~~G~~~~~ 272 (282)
T 3hbm_A 228 K--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWL-AKKGYEVEY 272 (282)
T ss_dssp E--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH-HHTTCEEEC
T ss_pred E--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH-HHCCCEEEc
Confidence 8 999999 89999999999999999999999999999 678999998
No 25
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.85 E-value=6e-08 Score=94.26 Aligned_cols=130 Identities=8% Similarity=0.100 Sum_probs=80.8
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhc-----CCCCEEEEEcCCCCCCCCCCCchhHHHh--hhcCcccccccCh---H
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVN-----SNHPFLWIIRPDLVTGETADMPSEFEVK--AKETGFIARWCPQ---E 260 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~iw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~pq---~ 260 (388)
+++|+++.+-...... .+..+++++.. .+..+++..+.+.. +-+.+.+. ..+++.+.+++++ .
T Consensus 230 ~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~~~------~~~~l~~~~~~~~~v~~~~~lg~~~~~ 302 (396)
T 3dzc_A 230 KKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLNPN------VREPVNKLLKGVSNIVLIEPQQYLPFV 302 (396)
T ss_dssp SEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBCHH------HHHHHHHHTTTCTTEEEECCCCHHHHH
T ss_pred CCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCChH------HHHHHHHHHcCCCCEEEeCCCCHHHHH
Confidence 4677776522222222 24456666543 24566665543210 11112211 1246777776653 3
Q ss_pred hhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 261 EVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 261 ~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
.+++.+++ ||+.+| |.+.||.++|+|+|+..-..+++. .+ + .|.++.+ .. +.++|.+++.++++|
T Consensus 303 ~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e---~v-~-~G~~~lv-----~~--d~~~l~~ai~~ll~d 367 (396)
T 3dzc_A 303 YLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE---AV-A-AGTVKLV-----GT--NQQQICDALSLLLTD 367 (396)
T ss_dssp HHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH---HH-H-HTSEEEC-----TT--CHHHHHHHHHHHHHC
T ss_pred HHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH---HH-H-cCceEEc-----CC--CHHHHHHHHHHHHcC
Confidence 58889998 999988 666799999999999865555532 23 4 5888777 32 689999999999998
Q ss_pred ch
Q 047540 341 EK 342 (388)
Q Consensus 341 ~~ 342 (388)
++
T Consensus 368 ~~ 369 (396)
T 3dzc_A 368 PQ 369 (396)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 26
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.81 E-value=6.7e-08 Score=94.16 Aligned_cols=131 Identities=12% Similarity=0.125 Sum_probs=82.0
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHHhc-----CCCCEEEEEcCCCCCCCCCCCchhHHHhh--hcCcccccccCh---
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGLVN-----SNHPFLWIIRPDLVTGETADMPSEFEVKA--KETGFIARWCPQ--- 259 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~pq--- 259 (388)
++++++++.|....... .+..+++++.. .+.++++..+.+.. +-+.+.+.. .+++.+.+++++
T Consensus 223 ~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~------~~~~l~~~~~~~~~v~l~~~l~~~~~ 295 (403)
T 3ot5_A 223 DNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVYPMHLNPA------VREKAMAILGGHERIHLIEPLDAIDF 295 (403)
T ss_dssp TCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEEECCSCHH------HHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEEecCCCHH------HHHHHHHHhCCCCCEEEeCCCCHHHH
Confidence 35677776554221111 23445555432 24566666543210 011111111 247778888864
Q ss_pred HhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHc
Q 047540 260 EEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELME 339 (388)
Q Consensus 260 ~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~ 339 (388)
..+++++++ +|+.+|.. +.||.++|+|+|+.|-..+++. .+ + .|.|+.+ . .+.++|.+++.++++
T Consensus 296 ~~l~~~ad~--vv~~SGg~-~~EA~a~g~PvV~~~~~~~~~e---~v-~-~g~~~lv-----~--~d~~~l~~ai~~ll~ 360 (403)
T 3ot5_A 296 HNFLRKSYL--VFTDSGGV-QEEAPGMGVPVLVLRDTTERPE---GI-E-AGTLKLI-----G--TNKENLIKEALDLLD 360 (403)
T ss_dssp HHHHHHEEE--EEECCHHH-HHHGGGTTCCEEECCSSCSCHH---HH-H-HTSEEEC-----C--SCHHHHHHHHHHHHH
T ss_pred HHHHHhcCE--EEECCccH-HHHHHHhCCCEEEecCCCcchh---he-e-CCcEEEc-----C--CCHHHHHHHHHHHHc
Confidence 348888888 99887532 3699999999999976666654 23 3 5888888 4 389999999999999
Q ss_pred Cch
Q 047540 340 GEK 342 (388)
Q Consensus 340 ~~~ 342 (388)
|++
T Consensus 361 ~~~ 363 (403)
T 3ot5_A 361 NKE 363 (403)
T ss_dssp CHH
T ss_pred CHH
Confidence 876
No 27
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.71 E-value=4.8e-07 Score=87.52 Aligned_cols=245 Identities=13% Similarity=0.074 Sum_probs=135.0
Q ss_pred cHHHHHHHHHhhcCCCCccEEEE--cCCcchHHHHHHHhCCCeEEEccCchhHHHHhhhhcccccCCCCCcccccchhHH
Q 047540 27 LQPFLDLLQKLKSSSNSVSCIIS--DGFMPFTVTAAQQLGIPIALFFTIAARSFKGCMQLRTLEENTTLTSLIDLNSYAT 104 (388)
Q Consensus 27 ~~~~~~ll~~l~~~~~~~D~iI~--D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~pr~~~~~~~~~ 104 (388)
...+.+++++. +||+||+ |....++..+|..+|||++.+.... . .. .. ..| .
T Consensus 83 ~~~l~~~l~~~-----kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl----r------s~-~~-~~p---------e 136 (385)
T 4hwg_A 83 IEKVDEVLEKE-----KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN----R------CF-DQ-RVP---------E 136 (385)
T ss_dssp HHHHHHHHHHH-----CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC----C------CS-CT-TST---------H
T ss_pred HHHHHHHHHhc-----CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC----c------cc-cc-cCc---------H
Confidence 34467777776 9999987 3344445788999999976553211 0 00 00 001 1
Q ss_pred HHHHHHHHhhccCCeEEEcChhhhhHHHHHHHHhhCC--CceecCCcccchhhccccCCCCCCCCCCCCCCcccchHHHH
Q 047540 105 RVAIEAAKNAAKASAVVIHTFDALERQVLDALSAMFP--NLFTIGPLQLLLNQINEQGGNSLSSTGYKYNLWKEETECLQ 182 (388)
Q Consensus 105 ~~~~~~~~~~~~~~~~l~~s~~~le~~~l~~~~~~~p--~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 182 (388)
+..+.... .-++.+++.+-..-+.- .+...+ +++.+|-...+.-.. ..+ . ....++.+
T Consensus 137 e~nR~~~~--~~a~~~~~~te~~~~~l----~~~G~~~~~I~vtGnp~~D~~~~---------~~~----~-~~~~~~~~ 196 (385)
T 4hwg_A 137 EINRKIID--HISDVNITLTEHARRYL----IAEGLPAELTFKSGSHMPEVLDR---------FMP----K-ILKSDILD 196 (385)
T ss_dssp HHHHHHHH--HHCSEEEESSHHHHHHH----HHTTCCGGGEEECCCSHHHHHHH---------HHH----H-HHHCCHHH
T ss_pred HHHHHHHH--hhhceeecCCHHHHHHH----HHcCCCcCcEEEECCchHHHHHH---------hhh----h-cchhHHHH
Confidence 11122222 23667777773322211 122222 588888432221000 000 0 01122334
Q ss_pred HhcCCCCCCCcEEEeeCCCccCC-HHHHHHHHHHHhcC----CCCEEEEEcCCCCCCCCCCCchhHHHh---h--hcCcc
Q 047540 183 WLDSKELPNSVVYVNFGSSVYLT-KQQLTEVAMGLVNS----NHPFLWIIRPDLVTGETADMPSEFEVK---A--KETGF 252 (388)
Q Consensus 183 ~l~~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~al~~~----~~~~iw~~~~~~~~~~~~~~~~~~~~~---~--~~~~~ 252 (388)
-+.-.+ ++.|++++|...... .+.+..+++++... +..+|+..... ..+.+.+. . .+++.
T Consensus 197 ~lgl~~--~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~--------~~~~l~~~~~~~~~~~~v~ 266 (385)
T 4hwg_A 197 KLSLTP--KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR--------TKKRLEDLEGFKELGDKIR 266 (385)
T ss_dssp HTTCCT--TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH--------HHHHHHTSGGGGGTGGGEE
T ss_pred HcCCCc--CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH--------HHHHHHHHHHHhcCCCCEE
Confidence 444332 468888887654332 24556677766542 56777765421 11111111 1 24666
Q ss_pred cccccCh---HhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHH
Q 047540 253 IARWCPQ---EEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNE 329 (388)
Q Consensus 253 v~~~~pq---~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~ 329 (388)
+.+.+++ ..+++++++ +||-+|. .+.||.++|+|+|.++...+.+. .+ + .|.++.+ . .+.++
T Consensus 267 l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~v-~-~G~~~lv-----~--~d~~~ 331 (385)
T 4hwg_A 267 FLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---GM-D-AGTLIMS-----G--FKAER 331 (385)
T ss_dssp ECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---HH-H-HTCCEEC-----C--SSHHH
T ss_pred EEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---hh-h-cCceEEc-----C--CCHHH
Confidence 6555544 458889998 9999886 46899999999999987554222 23 4 5888777 3 37899
Q ss_pred HHHHHHHHHcCch
Q 047540 330 VEKLVRELMEGEK 342 (388)
Q Consensus 330 l~~ai~~vl~~~~ 342 (388)
|.+++.++++|+.
T Consensus 332 i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 332 VLQAVKTITEEHD 344 (385)
T ss_dssp HHHHHHHHHTTCB
T ss_pred HHHHHHHHHhChH
Confidence 9999999999875
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.68 E-value=6.6e-07 Score=85.59 Aligned_cols=129 Identities=15% Similarity=0.167 Sum_probs=81.8
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhc-----CCCCEEEEEcCCCCCCCCCCCchhHHHhh--hcCcccccccCh---H
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVN-----SNHPFLWIIRPDLVTGETADMPSEFEVKA--KETGFIARWCPQ---E 260 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~pq---~ 260 (388)
+++|+++.|...... .+..+++++.. .+..+++..+.+.. +-+.+.+.. .+++.+.+++++ .
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~------~~~~l~~~~~~~~~v~~~g~~g~~~~~ 269 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNPV------VREAVFPVLKGVRNFVLLDPLEYGSMA 269 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCHH------HHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCHH------HHHHHHHHhccCCCEEEECCCCHHHHH
Confidence 467777777543221 34445555432 23455544443210 011122211 246777755554 3
Q ss_pred hhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 261 EVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 261 ~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
.+|+.+++ ||+++| |.+.||+++|+|+|+.+..+++... + + .|.|+.+ + .+.++|.++|.++++|
T Consensus 270 ~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~---~-~-~g~g~lv-----~--~d~~~la~~i~~ll~d 334 (376)
T 1v4v_A 270 ALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG---L-K-AGILKLA-----G--TDPEGVYRVVKGLLEN 334 (376)
T ss_dssp HHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---H-H-HTSEEEC-----C--SCHHHHHHHHHHHHTC
T ss_pred HHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh---h-c-CCceEEC-----C--CCHHHHHHHHHHHHhC
Confidence 68889988 999883 4466999999999999877776652 3 3 5888888 4 3889999999999998
Q ss_pred ch
Q 047540 341 EK 342 (388)
Q Consensus 341 ~~ 342 (388)
++
T Consensus 335 ~~ 336 (376)
T 1v4v_A 335 PE 336 (376)
T ss_dssp HH
T ss_pred hH
Confidence 75
No 29
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.66 E-value=6.2e-06 Score=78.83 Aligned_cols=130 Identities=12% Similarity=0.118 Sum_probs=81.3
Q ss_pred CCcEEEeeCCCcc-CCHHHHHHHHHHHhc--CCCCEEEEEcCCCCCCCCCCCchhHH---HhhhcCcccccccChHh---
Q 047540 191 NSVVYVNFGSSVY-LTKQQLTEVAMGLVN--SNHPFLWIIRPDLVTGETADMPSEFE---VKAKETGFIARWCPQEE--- 261 (388)
Q Consensus 191 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~pq~~--- 261 (388)
+..+++..|+... ...+.+.+.+..+.+ .+..+++ +|... ....+. ....+++.+.+|+|+.+
T Consensus 197 ~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i-~G~g~-------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~ 268 (394)
T 3okp_A 197 TTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLI-VGSGR-------YESTLRRLATDVSQNVKFLGRLEYQDMIN 268 (394)
T ss_dssp TCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEE-ECCCT-------THHHHHHHTGGGGGGEEEEESCCHHHHHH
T ss_pred CceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEE-EcCch-------HHHHHHHHHhcccCeEEEcCCCCHHHHHH
Confidence 4467777888642 233333333333333 2345444 44321 112222 22346888899997654
Q ss_pred hhcCCCcceeee-----------ccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHH
Q 047540 262 VLNHPAVGGFFT-----------HSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEV 330 (388)
Q Consensus 262 ~L~~~~~~~~It-----------hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l 330 (388)
++..+++ +|. -|.-+++.||+++|+|+|+.+.. .....+ +. |.|..+ + .-+.+++
T Consensus 269 ~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~i-~~-~~g~~~-----~-~~d~~~l 334 (394)
T 3okp_A 269 TLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSG----GAPETV-TP-ATGLVV-----E-GSDVDKL 334 (394)
T ss_dssp HHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSST----TGGGGC-CT-TTEEEC-----C-TTCHHHH
T ss_pred HHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCC----ChHHHH-hc-CCceEe-----C-CCCHHHH
Confidence 7888888 665 33346899999999999997653 233334 43 578888 3 3478999
Q ss_pred HHHHHHHHcCch
Q 047540 331 EKLVRELMEGEK 342 (388)
Q Consensus 331 ~~ai~~vl~~~~ 342 (388)
.++|.++++|++
T Consensus 335 ~~~i~~l~~~~~ 346 (394)
T 3okp_A 335 SELLIELLDDPI 346 (394)
T ss_dssp HHHHHHHHTCHH
T ss_pred HHHHHHHHhCHH
Confidence 999999999875
No 30
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.63 E-value=6.8e-07 Score=85.63 Aligned_cols=130 Identities=12% Similarity=0.134 Sum_probs=83.1
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhc----C-CCCEEEEEcCCCCCCCCCCCchhHHHhh--hcCcccccccCh---H
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVN----S-NHPFLWIIRPDLVTGETADMPSEFEVKA--KETGFIARWCPQ---E 260 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~----~-~~~~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~pq---~ 260 (388)
+++++++.|...... +.+..+++++.. . +..+++..+.+. . +.+.+.+.. .+++.+.+++++ .
T Consensus 205 ~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~--~----~~~~l~~~~~~~~~v~~~g~~~~~~~~ 277 (384)
T 1vgv_A 205 KKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP--N----VREPVNRILGHVKNVILIDPQEYLPFV 277 (384)
T ss_dssp SEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH--H----HHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH--H----HHHHHHHHhhcCCCEEEeCCCCHHHHH
Confidence 467888888764322 334445555443 2 345555433210 0 111122211 246777666664 3
Q ss_pred hhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 261 EVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 261 ~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
.+|+.+++ ||+.+|. .++||+++|+|+|+.|..++... +++ .|.|+.+ +. +.+++.++|.++++|
T Consensus 278 ~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~e----~v~-~g~g~lv-----~~--d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 278 WLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERPE----AVT-AGTVRLV-----GT--DKQRIVEEVTRLLKD 342 (384)
T ss_dssp HHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSCHH----HHH-HTSEEEE-----CS--SHHHHHHHHHHHHHC
T ss_pred HHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCcch----hhh-CCceEEe-----CC--CHHHHHHHHHHHHhC
Confidence 48889998 9998854 48899999999999987544332 324 4899999 44 889999999999998
Q ss_pred ch
Q 047540 341 EK 342 (388)
Q Consensus 341 ~~ 342 (388)
++
T Consensus 343 ~~ 344 (384)
T 1vgv_A 343 EN 344 (384)
T ss_dssp HH
T ss_pred hH
Confidence 75
No 31
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.37 E-value=0.00016 Score=69.26 Aligned_cols=129 Identities=10% Similarity=0.076 Sum_probs=82.4
Q ss_pred CcEEEeeCCC-cc-CCHHHHHHHHHHHhcC--CCCEEEEEcCCCCCCCCCCCchhHHHh---hhcCcccccccChH---h
Q 047540 192 SVVYVNFGSS-VY-LTKQQLTEVAMGLVNS--NHPFLWIIRPDLVTGETADMPSEFEVK---AKETGFIARWCPQE---E 261 (388)
Q Consensus 192 ~~v~vs~Gs~-~~-~~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~pq~---~ 261 (388)
..+++..|+. .. ...+.+.+.+..+.+. +..+ ..+|... . +.+.+. ..+++.+.+++++. .
T Consensus 208 ~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l-~i~G~~~-------~-~~l~~~~~~~~~~v~~~g~~~~~~~~~ 278 (406)
T 2gek_A 208 GRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEI-LIVGRGD-------E-DELREQAGDLAGHLRFLGQVDDATKAS 278 (406)
T ss_dssp SCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEE-EEESCSC-------H-HHHHHHTGGGGGGEEECCSCCHHHHHH
T ss_pred CeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEE-EEEcCCc-------H-HHHHHHHHhccCcEEEEecCCHHHHHH
Confidence 3577777886 42 2334443444444332 3343 3444331 1 222222 24678889999975 5
Q ss_pred hhcCCCcceeeec----cCc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHH
Q 047540 262 VLNHPAVGGFFTH----SGW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRE 336 (388)
Q Consensus 262 ~L~~~~~~~~Ith----gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ 336 (388)
+|..+++ +|.- -|+ ++++||+++|+|+|+.+. ......+ +.-+.|..+ + .-+.+++.++|.+
T Consensus 279 ~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i-~~~~~g~~~-----~-~~d~~~l~~~i~~ 345 (406)
T 2gek_A 279 AMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVL-ADGDAGRLV-----P-VDDADGMAAALIG 345 (406)
T ss_dssp HHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHH-TTTTSSEEC-----C-TTCHHHHHHHHHH
T ss_pred HHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHh-cCCCceEEe-----C-CCCHHHHHHHHHH
Confidence 8889998 5533 344 479999999999999765 3445555 555678887 3 3478899999999
Q ss_pred HHcCch
Q 047540 337 LMEGEK 342 (388)
Q Consensus 337 vl~~~~ 342 (388)
+++|++
T Consensus 346 l~~~~~ 351 (406)
T 2gek_A 346 ILEDDQ 351 (406)
T ss_dssp HHHCHH
T ss_pred HHcCHH
Confidence 999875
No 32
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.35 E-value=7.8e-06 Score=77.80 Aligned_cols=130 Identities=12% Similarity=0.078 Sum_probs=80.5
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcC-----CCCEEEEEcCCCCCCCCCCCchhHHHhhh--cCcccccccChH---
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNS-----NHPFLWIIRPDLVTGETADMPSEFEVKAK--ETGFIARWCPQE--- 260 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~iw~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~pq~--- 260 (388)
+++++++.|...... +.+..+++++... +..+++ +..... .+-+...+... +++.+.+++++.
T Consensus 205 ~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~g~~~----~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 277 (375)
T 3beo_A 205 NRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PVHMNP----VVRETANDILGDYGRIHLIEPLDVIDFH 277 (375)
T ss_dssp SEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--ECCSCH----HHHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eCCCCH----HHHHHHHHHhhccCCEEEeCCCCHHHHH
Confidence 467777777654321 3455566665432 334333 322100 01111111122 577777777654
Q ss_pred hhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 261 EVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 261 ~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
.+|+.+++ ||+.+| +.++||+++|+|+|+.+..+... ..+ + .|.|+.+ +. +.+++.++|.++++|
T Consensus 278 ~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~---e~v-~-~g~g~~v-----~~--d~~~la~~i~~ll~~ 342 (375)
T 3beo_A 278 NVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP---EGI-E-AGTLKLA-----GT--DEETIFSLADELLSD 342 (375)
T ss_dssp HHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH---HHH-H-TTSEEEC-----CS--CHHHHHHHHHHHHHC
T ss_pred HHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc---eee-c-CCceEEc-----CC--CHHHHHHHHHHHHhC
Confidence 48888988 898874 45889999999999986444432 223 4 4789888 43 889999999999998
Q ss_pred ch
Q 047540 341 EK 342 (388)
Q Consensus 341 ~~ 342 (388)
++
T Consensus 343 ~~ 344 (375)
T 3beo_A 343 KE 344 (375)
T ss_dssp HH
T ss_pred hH
Confidence 75
No 33
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.34 E-value=0.00033 Score=67.04 Aligned_cols=81 Identities=16% Similarity=0.113 Sum_probs=59.0
Q ss_pred cCcccccccCh-HhhhcCCCcceee----eccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCC
Q 047540 249 ETGFIARWCPQ-EEVLNHPAVGGFF----THSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDN 323 (388)
Q Consensus 249 ~~~~v~~~~pq-~~~L~~~~~~~~I----thgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 323 (388)
+++.+.++.++ ..+|..+++ +| .-|.-++++||+++|+|+|+.+..+ ....+ +.-+.|+.+ +
T Consensus 267 ~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v-~~~~~g~~~-----~- 333 (394)
T 2jjm_A 267 DRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVI-QHGDTGYLC-----E- 333 (394)
T ss_dssp GGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTC-CBTTTEEEE-----C-
T ss_pred CeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHh-hcCCceEEe-----C-
Confidence 56777777555 358899998 66 3344568999999999999987532 22333 444678888 3
Q ss_pred CCCHHHHHHHHHHHHcCch
Q 047540 324 QVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 324 ~~~~~~l~~ai~~vl~~~~ 342 (388)
.-+.+++.++|.++++|++
T Consensus 334 ~~d~~~la~~i~~l~~~~~ 352 (394)
T 2jjm_A 334 VGDTTGVADQAIQLLKDEE 352 (394)
T ss_dssp TTCHHHHHHHHHHHHHCHH
T ss_pred CCCHHHHHHHHHHHHcCHH
Confidence 3478999999999999875
No 34
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.26 E-value=0.00015 Score=70.35 Aligned_cols=96 Identities=16% Similarity=0.136 Sum_probs=68.0
Q ss_pred hcCcccccccChH---hhhcCCCcceeeecc---C-chhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecC
Q 047540 248 KETGFIARWCPQE---EVLNHPAVGGFFTHS---G-WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSG 320 (388)
Q Consensus 248 ~~~~~v~~~~pq~---~~L~~~~~~~~Ithg---G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 320 (388)
.+++.+.+|+|+. .+|..+++ +|... | -++++||+++|+|+|+.+. ......+ +.-+.|+.+
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~---- 373 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAV-AEGETGLLV---- 373 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHS-CBTTTEEEE----
T ss_pred CCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHh-hCCCcEEEC----
Confidence 3578889999864 48888888 66543 3 3579999999999999764 2344445 555678888
Q ss_pred CCCCCCHHHHHHHHHHHHcCchH-HHHHHHHHHHHHH
Q 047540 321 DDNQVGRNEVEKLVRELMEGEKG-MQMRNKASEWKRF 356 (388)
Q Consensus 321 ~~~~~~~~~l~~ai~~vl~~~~~-~~~~~~a~~l~~~ 356 (388)
+ .-+.+++.++|.++++|++. +.+.+++++..+.
T Consensus 374 -~-~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 374 -D-GHSPHAWADALATLLDDDETRIRMGEDAVEHART 408 (438)
T ss_dssp -S-SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred -C-CCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 3 34789999999999998752 3455555554443
No 35
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.25 E-value=4.4e-06 Score=71.24 Aligned_cols=139 Identities=7% Similarity=0.057 Sum_probs=88.1
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCCCCCCCchhHHH----hhhcCcccccccChH---hhh
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNS-NHPFLWIIRPDLVTGETADMPSEFEV----KAKETGFIARWCPQE---EVL 263 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~pq~---~~L 263 (388)
..+++..|+... .+.+..+++++... +..++++-.+... ..+. .... ...+|+.+.+|+++. .++
T Consensus 23 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~~----~~l~-~~~~~~~~~l~~~v~~~g~~~~~e~~~~~ 95 (177)
T 2f9f_A 23 GDFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSKG----DHAE-RYARKIMKIAPDNVKFLGSVSEEELIDLY 95 (177)
T ss_dssp CSCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCTT----STHH-HHHHHHHHHSCTTEEEEESCCHHHHHHHH
T ss_pred CCEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCccH----HHHH-HHHHhhhcccCCcEEEeCCCCHHHHHHHH
Confidence 445666777642 34466677777766 4566555432211 1111 1111 234588889999983 488
Q ss_pred cCCCcceeee---ccCc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHc
Q 047540 264 NHPAVGGFFT---HSGW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELME 339 (388)
Q Consensus 264 ~~~~~~~~It---hgG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~ 339 (388)
..+++ +|. +-|+ .+++||+++|+|+|+... ..+...+ +..+.|+.+ . -+.+++.++|.++++
T Consensus 96 ~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~-----~--~d~~~l~~~i~~l~~ 161 (177)
T 2f9f_A 96 SRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV-----N--ADVNEIIDAMKKVSK 161 (177)
T ss_dssp HHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE-----C--SCHHHHHHHHHHHHH
T ss_pred HhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe-----C--CCHHHHHHHHHHHHh
Confidence 88988 665 3344 489999999999999754 4445555 544577776 2 478899999999998
Q ss_pred CchHHHHHHHHHHH
Q 047540 340 GEKGMQMRNKASEW 353 (388)
Q Consensus 340 ~~~~~~~~~~a~~l 353 (388)
|++ .+++++++.
T Consensus 162 ~~~--~~~~~~~~~ 173 (177)
T 2f9f_A 162 NPD--KFKKDCFRR 173 (177)
T ss_dssp CTT--TTHHHHHHH
T ss_pred CHH--HHHHHHHHH
Confidence 875 124444443
No 36
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.17 E-value=0.00041 Score=66.91 Aligned_cols=175 Identities=14% Similarity=0.111 Sum_probs=100.0
Q ss_pred HHHHHhcCCCCCCCcEEEeeCCCc-c-CCHHHHHHHHHHHhcC----CCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcc
Q 047540 179 ECLQWLDSKELPNSVVYVNFGSSV-Y-LTKQQLTEVAMGLVNS----NHPFLWIIRPDLVTGETADMPSEFEVKAKETGF 252 (388)
Q Consensus 179 ~l~~~l~~~~~~~~~v~vs~Gs~~-~-~~~~~~~~~~~al~~~----~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (388)
.+.+-+...+ + .+++..|+.. . ...+.+.+.+..+.+. +.+++ .+|..... ....-..+.++.++++.
T Consensus 241 ~~~~~~~~~~--~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~-i~G~g~~~--~~~~l~~~~~~~~~~~~ 314 (439)
T 3fro_A 241 SLLSKFGMDE--G-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFI-IIGKGDPE--LEGWARSLEEKHGNVKV 314 (439)
T ss_dssp HHHHHHTCCS--C-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEE-EECCCCHH--HHHHHHHHHHHCTTEEE
T ss_pred HHHHHcCCCC--C-cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEE-EEcCCChh--HHHHHHHHHhhcCCEEE
Confidence 3444454444 3 7788888876 3 3445555555555442 34444 34432100 00000112222333445
Q ss_pred cccccChHh---hhcCCCcceeeecc---Cc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCC
Q 047540 253 IARWCPQEE---VLNHPAVGGFFTHS---GW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQV 325 (388)
Q Consensus 253 v~~~~pq~~---~L~~~~~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 325 (388)
+.+|+++.+ ++..+++ +|.-. |. ++++||+++|+|+|+-.. ......+ +. |.|..+ + .-
T Consensus 315 ~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~-~~-~~g~~~-----~-~~ 380 (439)
T 3fro_A 315 ITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILV-----K-AG 380 (439)
T ss_dssp ECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHC-CT-TTCEEE-----C-TT
T ss_pred EcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeE-Ec-CceEEe-----C-CC
Confidence 688898864 7888888 55332 33 679999999999999653 3344444 43 688888 3 35
Q ss_pred CHHHHHHHHHHHHc-CchH-HHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHh
Q 047540 326 GRNEVEKLVRELME-GEKG-MQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPVIKL 381 (388)
Q Consensus 326 ~~~~l~~ai~~vl~-~~~~-~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~~~ 381 (388)
+.+++.++|.++++ +++. +.+.+++++.. + .-+.....+++++.+.+.
T Consensus 381 d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~---~-----~~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 381 DPGELANAILKALELSRSDLSKFRENCKKRA---M-----SFSWEKSAERYVKAYTGS 430 (439)
T ss_dssp CHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH---H-----TSCHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH---h-----hCcHHHHHHHHHHHHHHH
Confidence 78999999999998 6641 33444444333 2 355555556665555543
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=97.85 E-value=0.00019 Score=67.94 Aligned_cols=143 Identities=14% Similarity=0.259 Sum_probs=90.8
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCCC----C-EEEEEcCCCCCCCCCCCchhHHH---hh--hcCcccccccChH
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSNH----P-FLWIIRPDLVTGETADMPSEFEV---KA--KETGFIARWCPQE 260 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~----~-~iw~~~~~~~~~~~~~~~~~~~~---~~--~~~~~v~~~~pq~ 260 (388)
+..+++..|+... .+.+..+++++..... . -++.+|... .+.+.+ +. .+++.+.++.++.
T Consensus 195 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~--------~~~~~~~~~~~~~~~~v~~~g~~~~~ 264 (374)
T 2iw1_A 195 QQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDK--------PRKFEALAEKLGVRSNVHFFSGRNDV 264 (374)
T ss_dssp TCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSC--------CHHHHHHHHHHTCGGGEEEESCCSCH
T ss_pred CCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCC--------HHHHHHHHHHcCCCCcEEECCCcccH
Confidence 3567777787643 2445566777765532 2 244455421 122222 22 3577778876654
Q ss_pred -hhhcCCCcceeee----ccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHH
Q 047540 261 -EVLNHPAVGGFFT----HSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVR 335 (388)
Q Consensus 261 -~~L~~~~~~~~It----hgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~ 335 (388)
.++..+++ +|. -|.-++++||+++|+|+|+.+.. .+...+ +..+.|..+ +..-+.+++.++|.
T Consensus 265 ~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i-~~~~~g~~~-----~~~~~~~~l~~~i~ 332 (374)
T 2iw1_A 265 SELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYI-ADANCGTVI-----AEPFSQEQLNEVLR 332 (374)
T ss_dssp HHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHH-HHHTCEEEE-----CSSCCHHHHHHHHH
T ss_pred HHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecCC----Cchhhh-ccCCceEEe-----CCCCCHHHHHHHHH
Confidence 48888988 665 34457899999999999997753 334455 556889999 43468899999999
Q ss_pred HHHcCchH-HHHHHHHHHHHH
Q 047540 336 ELMEGEKG-MQMRNKASEWKR 355 (388)
Q Consensus 336 ~vl~~~~~-~~~~~~a~~l~~ 355 (388)
++++|++. +.+.+++++..+
T Consensus 333 ~l~~~~~~~~~~~~~~~~~~~ 353 (374)
T 2iw1_A 333 KALTQSPLRMAWAENARHYAD 353 (374)
T ss_dssp HHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHcChHHHHHHHHHHHHHHH
Confidence 99998752 334444444433
No 38
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=97.82 E-value=0.0013 Score=64.99 Aligned_cols=136 Identities=12% Similarity=0.089 Sum_probs=83.0
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcCC----CC-EEEEEcCCCCCCCC-CCC-------chhHHHh-----hhcCccc
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNSN----HP-FLWIIRPDLVTGET-ADM-------PSEFEVK-----AKETGFI 253 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~----~~-~iw~~~~~~~~~~~-~~~-------~~~~~~~-----~~~~~~v 253 (388)
..+++..|.... .+.+..+++++.... .. .++.+|........ ..+ .+.+.+. +.+++.+
T Consensus 262 ~~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~ 339 (499)
T 2r60_A 262 LPAIIASSRLDQ--KKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSM 339 (499)
T ss_dssp SCEEEECSCCCG--GGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEE
T ss_pred CcEEEEeecCcc--ccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEE
Confidence 456677777642 344556667766543 22 45566642110000 000 1122221 2456888
Q ss_pred ccccChHh---hhcCC----Ccceeeecc---Cc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC
Q 047540 254 ARWCPQEE---VLNHP----AVGGFFTHS---GW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD 322 (388)
Q Consensus 254 ~~~~pq~~---~L~~~----~~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 322 (388)
.+++|+.+ ++..+ ++ ||.-. |. .+++||+++|+|+|+... ......+ +.-..|+.+ +
T Consensus 340 ~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~-----~ 407 (499)
T 2r60_A 340 FPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLV-----D 407 (499)
T ss_dssp EECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEE-----C
T ss_pred CCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEe-----C
Confidence 99997654 77888 87 66432 44 578999999999999764 2334444 544478888 3
Q ss_pred CCCCHHHHHHHHHHHHcCch
Q 047540 323 NQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 323 ~~~~~~~l~~ai~~vl~~~~ 342 (388)
.-+.+++.++|.++++|++
T Consensus 408 -~~d~~~la~~i~~ll~~~~ 426 (499)
T 2r60_A 408 -PEDPEDIARGLLKAFESEE 426 (499)
T ss_dssp -TTCHHHHHHHHHHHHSCHH
T ss_pred -CCCHHHHHHHHHHHHhCHH
Confidence 3578999999999999875
No 39
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.77 E-value=0.00079 Score=67.78 Aligned_cols=117 Identities=9% Similarity=0.019 Sum_probs=73.9
Q ss_pred cCcccccccChH---hhhcCCCcceee--ec-cCchhHHHHHhhCCcEEecCCccchhHh-HHHHhhhhceeEEeeecCC
Q 047540 249 ETGFIARWCPQE---EVLNHPAVGGFF--TH-SGWNSTIESLCAGVPMICWPFLGDQATN-CRYTCNEWGVGMDITNSGD 321 (388)
Q Consensus 249 ~~~~v~~~~pq~---~~L~~~~~~~~I--th-gG~~s~~eal~~GvP~i~~P~~~DQ~~n-a~~v~~~~G~G~~l~~~~~ 321 (388)
+++.+.+++|+. .++..+++ || ++ |+-++++||+++|+|+|++|-..-.... +..+ ...|+...+
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v----- 505 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMN----- 505 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGB-----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhh-----
Confidence 678889999854 47888888 66 32 3446789999999999998753211112 2334 556776666
Q ss_pred CCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHh--CCCCChHHHHHHHHHHHHHh
Q 047540 322 DNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAA--APDGSSATNLEKLEQPVIKL 381 (388)
Q Consensus 322 ~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~--~~gg~s~~~~~~~v~~l~~~ 381 (388)
.. +.+++.+++.++++|++ .++ ++++..++.+ .+..+......++.+.+...
T Consensus 506 ~~--~~~~la~~i~~l~~~~~---~~~---~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~ 559 (568)
T 2vsy_A 506 VA--DDAAFVAKAVALASDPA---ALT---ALHARVDVLRRASGVFHMDGFADDFGALLQAL 559 (568)
T ss_dssp CS--SHHHHHHHHHHHHHCHH---HHH---HHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHH
T ss_pred cC--CHHHHHHHHHHHhcCHH---HHH---HHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHH
Confidence 33 88999999999999876 222 2233333222 34556555555555544443
No 40
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.55 E-value=0.00059 Score=56.75 Aligned_cols=139 Identities=10% Similarity=0.119 Sum_probs=81.0
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcCC--CCE-EEEEcCCCCCCCCCCCchhHH---HhhhcCcccccccChHh---h
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNSN--HPF-LWIIRPDLVTGETADMPSEFE---VKAKETGFIARWCPQEE---V 262 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~--~~~-iw~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~pq~~---~ 262 (388)
+++++..|.... .+.+..+++++.... ..+ ++.+|... ..+.+. .+.+.++.+ +|+|+.+ +
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~-------~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~ 71 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGP-------DEKKIKLLAQKLGVKAEF-GFVNSNELLEI 71 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCST-------THHHHHHHHHHHTCEEEC-CCCCHHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCc-------cHHHHHHHHHHcCCeEEE-eecCHHHHHHH
Confidence 577888888743 344566666766543 122 33344321 112222 222336677 9998754 7
Q ss_pred hcCCCcceeeecc---Cc-hhHHHHHhhCC-cEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHH
Q 047540 263 LNHPAVGGFFTHS---GW-NSTIESLCAGV-PMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVREL 337 (388)
Q Consensus 263 L~~~~~~~~Ithg---G~-~s~~eal~~Gv-P~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~v 337 (388)
+..+++ +|.-. |+ .+++||+++|+ |+|+....+. ....+ ..-+. .+ ..-+.+++.++|.++
T Consensus 72 ~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~-~~~~~--~~------~~~~~~~l~~~i~~l 137 (166)
T 3qhp_A 72 LKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFA-LDERS--LF------EPNNAKDLSAKIDWW 137 (166)
T ss_dssp HTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGC-SSGGG--EE------CTTCHHHHHHHHHHH
T ss_pred HHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhc-cCCce--EE------cCCCHHHHHHHHHHH
Confidence 888888 66522 33 58999999996 9999332211 11122 32222 44 235789999999999
Q ss_pred HcCchH-HHHHHHHHHHH
Q 047540 338 MEGEKG-MQMRNKASEWK 354 (388)
Q Consensus 338 l~~~~~-~~~~~~a~~l~ 354 (388)
+++++. +.+.+++++..
T Consensus 138 ~~~~~~~~~~~~~~~~~~ 155 (166)
T 3qhp_A 138 LENKLERERMQNEYAKSA 155 (166)
T ss_dssp HHCHHHHHHHHHHHHHHH
T ss_pred HhCHHHHHHHHHHHHHHH
Confidence 998752 34555555544
No 41
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.46 E-value=0.0043 Score=52.99 Aligned_cols=89 Identities=12% Similarity=0.123 Sum_probs=62.2
Q ss_pred Cccc-ccccChH---hhhcCCCcceeeecc---C-chhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCC
Q 047540 250 TGFI-ARWCPQE---EVLNHPAVGGFFTHS---G-WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGD 321 (388)
Q Consensus 250 ~~~v-~~~~pq~---~~L~~~~~~~~Ithg---G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 321 (388)
++.+ .+++++. .++..+++ +|... | -.+++||+++|+|+|+.... .....+ ..+.|..+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~--~~~~g~~~----- 162 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII--TNETGILV----- 162 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC--CTTTCEEE-----
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc--CCCceEEe-----
Confidence 7888 9999854 48888888 66433 3 35789999999999987542 333333 34678888
Q ss_pred CCCCCHHHHHHHHHHHHc-CchH-HHHHHHHHH
Q 047540 322 DNQVGRNEVEKLVRELME-GEKG-MQMRNKASE 352 (388)
Q Consensus 322 ~~~~~~~~l~~ai~~vl~-~~~~-~~~~~~a~~ 352 (388)
+ .-+.+++.++|.++++ |++. +.+.+++++
T Consensus 163 ~-~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~ 194 (200)
T 2bfw_A 163 K-AGDPGELANAILKALELSRSDLSKFRENCKK 194 (200)
T ss_dssp C-TTCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred c-CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 3 3478999999999998 8752 234444443
No 42
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=97.44 E-value=0.0013 Score=63.31 Aligned_cols=79 Identities=14% Similarity=0.023 Sum_probs=59.5
Q ss_pred cCcccccccC---hH---hhhcCCCcceeeecc----CchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeee
Q 047540 249 ETGFIARWCP---QE---EVLNHPAVGGFFTHS----GWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITN 318 (388)
Q Consensus 249 ~~~~v~~~~p---q~---~~L~~~~~~~~Ithg----G~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~ 318 (388)
+++.+.+|++ +. .++..+++ ||.-. .-++++||+++|+|+|+.+. ..+...+ +.-+.|..+
T Consensus 293 ~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~-- 363 (416)
T 2x6q_A 293 YDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLV-- 363 (416)
T ss_dssp TTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEE--
T ss_pred CcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEE--
Confidence 5777777665 32 37888888 66544 34579999999999999764 3455555 555688888
Q ss_pred cCCCCCCCHHHHHHHHHHHHcCch
Q 047540 319 SGDDNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 319 ~~~~~~~~~~~l~~ai~~vl~~~~ 342 (388)
+ +.+++.++|.++++|++
T Consensus 364 ---~---d~~~la~~i~~ll~~~~ 381 (416)
T 2x6q_A 364 ---R---DANEAVEVVLYLLKHPE 381 (416)
T ss_dssp ---S---SHHHHHHHHHHHHHCHH
T ss_pred ---C---CHHHHHHHHHHHHhCHH
Confidence 4 78999999999999875
No 43
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=97.36 E-value=0.00038 Score=65.22 Aligned_cols=127 Identities=13% Similarity=0.014 Sum_probs=81.1
Q ss_pred EEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChH---hhhcCCCcce
Q 047540 194 VYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQE---EVLNHPAVGG 270 (388)
Q Consensus 194 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~---~~L~~~~~~~ 270 (388)
+++..|+.. ..+.+..+++++...+.+++++ |..... . .-..+.++..+++.+.+|+++. .++..+++-+
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~~~---~-~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv~v 236 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAWEP---E-YFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVL 236 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCCCH---H-HHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSEEE
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCcccH---H-HHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCEEE
Confidence 455567754 2344556667766667776654 432100 0 0012223334788899999986 5888899833
Q ss_pred eeec-----------cCc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhh--hceeEEeeecCCCCCCCHHHHHHHHHH
Q 047540 271 FFTH-----------SGW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNE--WGVGMDITNSGDDNQVGRNEVEKLVRE 336 (388)
Q Consensus 271 ~Ith-----------gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~--~G~G~~l~~~~~~~~~~~~~l~~ai~~ 336 (388)
+-++ -|. ++++||+++|+|+|+.... .+...+ +. -..|+.+ +. +.+++.++|.+
T Consensus 237 ~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~-~~~~~~~g~~~-----~~--d~~~l~~~i~~ 304 (342)
T 2iuy_A 237 AMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIV-PSVGEVVGYGT-----DF--APDEARRTLAG 304 (342)
T ss_dssp ECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHG-GGGEEECCSSS-----CC--CHHHHHHHHHT
T ss_pred ECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHh-cccCCCceEEc-----CC--CHHHHHHHHHH
Confidence 2233 343 5799999999999998753 344444 44 3567777 33 89999999999
Q ss_pred HHc
Q 047540 337 LME 339 (388)
Q Consensus 337 vl~ 339 (388)
+++
T Consensus 305 l~~ 307 (342)
T 2iuy_A 305 LPA 307 (342)
T ss_dssp SCC
T ss_pred HHH
Confidence 887
No 44
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.31 E-value=0.0027 Score=66.15 Aligned_cols=141 Identities=20% Similarity=0.229 Sum_probs=91.5
Q ss_pred CCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHh--hhcCcccccccChHh---hhc
Q 047540 190 PNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVK--AKETGFIARWCPQEE---VLN 264 (388)
Q Consensus 190 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~pq~~---~L~ 264 (388)
++.+||.+|.+....+++.+...++-|++.+.-++|....+.... ..+-..+... ..+++.+.+..|..+ .+.
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~--~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~ 598 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE--PNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQ 598 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGH--HHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGG
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHH--HHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhC
Confidence 367999999999999999999999999999999999987543110 0010111111 134566677777655 445
Q ss_pred CCCcceeee---ccCchhHHHHHhhCCcEEecCCcc-chhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 265 HPAVGGFFT---HSGWNSTIESLCAGVPMICWPFLG-DQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 265 ~~~~~~~It---hgG~~s~~eal~~GvP~i~~P~~~-DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
..++ ++. .+|.+|+.|||.+|||+|.+|-.. --..-+..+ ..+|+...| - -+.++-.+..-++-+|
T Consensus 599 ~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l-~~~gl~e~i-----a--~~~~~Y~~~a~~la~d 668 (723)
T 4gyw_A 599 LADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQL-TCLGCLELI-----A--KNRQEYEDIAVKLGTD 668 (723)
T ss_dssp GCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHH-HHHTCGGGB-----C--SSHHHHHHHHHHHHHC
T ss_pred CCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHH-HHcCCcccc-----c--CCHHHHHHHHHHHhcC
Confidence 5666 776 789999999999999999999321 112223333 566776666 1 3444433333355556
Q ss_pred ch
Q 047540 341 EK 342 (388)
Q Consensus 341 ~~ 342 (388)
.+
T Consensus 669 ~~ 670 (723)
T 4gyw_A 669 LE 670 (723)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 45
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.26 E-value=0.0031 Score=60.54 Aligned_cols=109 Identities=13% Similarity=0.113 Sum_probs=66.1
Q ss_pred cccccccChHh---hhcCCCcceeee--c-cC-chhHHHHHhhCCcEEecCCccchhHhHHHHhhhhce-----------
Q 047540 251 GFIARWCPQEE---VLNHPAVGGFFT--H-SG-WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGV----------- 312 (388)
Q Consensus 251 ~~v~~~~pq~~---~L~~~~~~~~It--h-gG-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~----------- 312 (388)
+.+.+|+++.+ +|..+++ +|. + -| -.+++||+++|+|+|+-.. ......+ +. |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~-~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYF-SG-DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHS-CT-TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHH-cc-Ccccccccccccc
Confidence 44568998654 7888888 553 2 12 2479999999999999653 2333333 32 22
Q ss_pred -----eE--EeeecCCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHH
Q 047540 313 -----GM--DITNSGDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPVIK 380 (388)
Q Consensus 313 -----G~--~l~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~~ 380 (388)
|+ .+ . .-+.+++.++| ++++|++ .+ +++++..++.+.+.-+-....+++.+.+.+
T Consensus 328 ~~~~~G~~gl~-----~-~~d~~~la~~i-~l~~~~~---~~---~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 328 VDDRDGIGGIE-----G-IIDVDDLVEAF-TFFKDEK---NR---KEYGKRVQDFVKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp CTTTCSSCCEE-----E-ECCHHHHHHHH-HHTTSHH---HH---HHHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred cccccCcceee-----C-CCCHHHHHHHH-HHhcCHH---HH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 44 55 2 23889999999 9999875 22 233333333333455555555555544443
No 46
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=97.19 E-value=0.04 Score=57.93 Aligned_cols=81 Identities=11% Similarity=0.144 Sum_probs=52.9
Q ss_pred cCccccccc----ChHhhh---c-CCCcceeeecc---Cc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEe
Q 047540 249 ETGFIARWC----PQEEVL---N-HPAVGGFFTHS---GW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDI 316 (388)
Q Consensus 249 ~~~~v~~~~----pq~~~L---~-~~~~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l 316 (388)
+++.+.++. ++.++. . .+++ ||.-. |+ .+++||+++|+|+|+-. -......+ +.-..|+.+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV-~dg~~Gllv 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEII-VHGKSGFHI 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHC-CBTTTBEEE
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHH-ccCCcEEEe
Confidence 566666643 344443 3 4566 66432 33 57999999999999964 33344444 544678888
Q ss_pred eecCCCCCCCHHHHHHHHHHHH----cCch
Q 047540 317 TNSGDDNQVGRNEVEKLVRELM----EGEK 342 (388)
Q Consensus 317 ~~~~~~~~~~~~~l~~ai~~vl----~~~~ 342 (388)
+ .-+.+++.++|.+++ .|++
T Consensus 713 -----~-p~D~e~LA~aI~~lL~~Ll~d~~ 736 (816)
T 3s28_A 713 -----D-PYHGDQAADTLADFFTKCKEDPS 736 (816)
T ss_dssp -----C-TTSHHHHHHHHHHHHHHHHHCTH
T ss_pred -----C-CCCHHHHHHHHHHHHHHhccCHH
Confidence 4 347888999997766 7765
No 47
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.15 E-value=0.0026 Score=64.35 Aligned_cols=139 Identities=12% Similarity=0.031 Sum_probs=89.3
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEE--cCCCCCCCCCCCchhH-HHhhhcCcccccccChHh---hhcC
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWII--RPDLVTGETADMPSEF-EVKAKETGFIARWCPQEE---VLNH 265 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~--~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~pq~~---~L~~ 265 (388)
.++|.+|++.....+..+....+-+++.+..++|.. +..... ...+-..+ ...+.+++.+.+.+|..+ .+..
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~--~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~ 518 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGI--THPYVERFIKSYLGDSATAHPHSPYHQYLRILHN 518 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGG--GHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHT
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchh--hHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhc
Confidence 689999999888888888888888888888888753 322100 00000111 112345667788888765 4577
Q ss_pred CCcceeeec---cCchhHHHHHhhCCcEEecCCccchhHhH-HHHhhhhceeE-EeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 266 PAVGGFFTH---SGWNSTIESLCAGVPMICWPFLGDQATNC-RYTCNEWGVGM-DITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 266 ~~~~~~Ith---gG~~s~~eal~~GvP~i~~P~~~DQ~~na-~~v~~~~G~G~-~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
+++ |+.- +|.+|+.||+.+|||+|+++-..=--..+ ..+ ...|+.- .+. -+.++..+...++.+|
T Consensus 519 aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL-~~~GLpE~LIA-------~d~eeYv~~Av~La~D 588 (631)
T 3q3e_A 519 CDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLF-KRLGLPEWLIA-------NTVDEYVERAVRLAEN 588 (631)
T ss_dssp CSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHH-HHTTCCGGGEE-------SSHHHHHHHHHHHHHC
T ss_pred CcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHH-HhcCCCcceec-------CCHHHHHHHHHHHhCC
Confidence 777 6543 67789999999999999988432111122 223 4567654 241 3567777777788888
Q ss_pred ch
Q 047540 341 EK 342 (388)
Q Consensus 341 ~~ 342 (388)
++
T Consensus 589 ~~ 590 (631)
T 3q3e_A 589 HQ 590 (631)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 48
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.10 E-value=0.0027 Score=60.73 Aligned_cols=97 Identities=18% Similarity=0.257 Sum_probs=66.2
Q ss_pred cccccccChH-hhhcCCCcceeeec-----cCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCC
Q 047540 251 GFIARWCPQE-EVLNHPAVGGFFTH-----SGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQ 324 (388)
Q Consensus 251 ~~v~~~~pq~-~~L~~~~~~~~Ith-----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 324 (388)
+.+.++..+. .+++.+++ |+.- +|-.+++||+++|+|+|+-|..++.......+ .+.|.++..
T Consensus 262 v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~-~~~G~l~~~-------- 330 (374)
T 2xci_A 262 VILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL-EKEGAGFEV-------- 330 (374)
T ss_dssp EEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH-HHTTCEEEC--------
T ss_pred EEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH-HHCCCEEEe--------
Confidence 3444444443 48888887 5541 23478999999999999877777766666654 335776665
Q ss_pred CCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH
Q 047540 325 VGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAE 358 (388)
Q Consensus 325 ~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~ 358 (388)
-+.+++.++|.++++|+..+.|.+++++..+.-.
T Consensus 331 ~d~~~La~ai~~ll~d~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 331 KNETELVTKLTELLSVKKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp CSHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcc
Confidence 3678999999999987222347777776665544
No 49
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.85 E-value=0.0016 Score=61.51 Aligned_cols=111 Identities=13% Similarity=0.131 Sum_probs=77.7
Q ss_pred CcccccccChHh---hhcCCCcceeeeccCc---------hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEee
Q 047540 250 TGFIARWCPQEE---VLNHPAVGGFFTHSGW---------NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDIT 317 (388)
Q Consensus 250 ~~~v~~~~pq~~---~L~~~~~~~~IthgG~---------~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~ 317 (388)
|+.+.+|+|+.+ +|+.++.+++.+-+.+ +-+.|++++|+|+|+.+ ...++..+ ++.++|+.+
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~- 288 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIV- 288 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEE-
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEe-
Confidence 888999999876 4555666555422222 34789999999999866 34556666 677999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHH
Q 047540 318 NSGDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPV 378 (388)
Q Consensus 318 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l 378 (388)
+ +.+++.+++.++. .++.+.|++|+++.++.++. |....+.+.+.+..|
T Consensus 289 ----~---~~~e~~~~i~~l~-~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 289 ----K---DVEEAIMKVKNVN-EDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp ----S---SHHHHHHHHHHCC-HHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred ----C---CHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 4 4678888888754 33346799999999888883 444455555555444
No 50
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=96.52 E-value=0.058 Score=52.74 Aligned_cols=132 Identities=8% Similarity=0.019 Sum_probs=78.1
Q ss_pred CcEEEeeCCCccC-CHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchh---HHHhhhcCcc-cccccChH--hhhc
Q 047540 192 SVVYVNFGSSVYL-TKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSE---FEVKAKETGF-IARWCPQE--EVLN 264 (388)
Q Consensus 192 ~~v~vs~Gs~~~~-~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~~-v~~~~pq~--~~L~ 264 (388)
..+++..|..... ..+.+.+.+..+.+.+.+++++-.++.. +.+. +..+.++++. +.++.... .++.
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~------~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~ 364 (485)
T 1rzu_A 291 SPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVA------LEGALLAAASRHHGRVGVAIGYNEPLSHLMQA 364 (485)
T ss_dssp SCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHH------HHHHHHHHHHHTTTTEEEEESCCHHHHHHHHH
T ss_pred CeEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchH------HHHHHHHHHHhCCCcEEEecCCCHHHHHHHHh
Confidence 4577788887532 2333333333343345565554332100 0111 2222345676 57773332 4788
Q ss_pred CCCcceeeecc---C-chhHHHHHhhCCcEEecCCccchhHhHHHHhhhh---------ceeEEeeecCCCCCCCHHHHH
Q 047540 265 HPAVGGFFTHS---G-WNSTIESLCAGVPMICWPFLGDQATNCRYTCNEW---------GVGMDITNSGDDNQVGRNEVE 331 (388)
Q Consensus 265 ~~~~~~~Ithg---G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~---------G~G~~l~~~~~~~~~~~~~l~ 331 (388)
.+++ ||.-. | -.+++||+++|+|+|+... ......+ +.- +.|..+ + .-+.+++.
T Consensus 365 ~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~-----~-~~d~~~la 431 (485)
T 1rzu_A 365 GCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQF-----S-PVTLDGLK 431 (485)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEE-----S-SCSHHHHH
T ss_pred cCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEe-----C-CCCHHHHH
Confidence 8888 66432 3 3579999999999999764 3344444 433 578888 3 35789999
Q ss_pred HHHHHHH---cCch
Q 047540 332 KLVRELM---EGEK 342 (388)
Q Consensus 332 ~ai~~vl---~~~~ 342 (388)
++|.+++ +|++
T Consensus 432 ~~i~~ll~~~~~~~ 445 (485)
T 1rzu_A 432 QAIRRTVRYYHDPK 445 (485)
T ss_dssp HHHHHHHHHHTCHH
T ss_pred HHHHHHHHHhCCHH
Confidence 9999999 6764
No 51
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=96.11 E-value=0.085 Score=51.54 Aligned_cols=133 Identities=9% Similarity=0.050 Sum_probs=77.5
Q ss_pred CCcEEEeeCCCcc-CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhH---HHhhhcCcc-cccccChH--hhh
Q 047540 191 NSVVYVNFGSSVY-LTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEF---EVKAKETGF-IARWCPQE--EVL 263 (388)
Q Consensus 191 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~---~~~~~~~~~-v~~~~pq~--~~L 263 (388)
+..+++..|.... ...+.+.+.+..+.+.+..++++-.++.. ..+.+ ..+.++++. +.++.++. .++
T Consensus 291 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~------~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~ 364 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPV------LQEGFLAAAAEYPGQVGVQIGYHEAFSHRIM 364 (485)
T ss_dssp TSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHH------HHHHHHHHHHHSTTTEEEEESCCHHHHHHHH
T ss_pred CCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchH------HHHHHHHHHHhCCCcEEEeCCCCHHHHHHHH
Confidence 3566677777642 22333333333343335565554332100 01112 222335665 57773332 578
Q ss_pred cCCCcceeeecc---Cc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhh---------ceeEEeeecCCCCCCCHHHH
Q 047540 264 NHPAVGGFFTHS---GW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEW---------GVGMDITNSGDDNQVGRNEV 330 (388)
Q Consensus 264 ~~~~~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~---------G~G~~l~~~~~~~~~~~~~l 330 (388)
+.+++ ||.-. |. ++++||+++|+|+|+... ......+ +.- +.|..+ + .-+.+++
T Consensus 365 ~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~-----~-~~d~~~l 431 (485)
T 2qzs_A 365 GGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVF-----E-DSNAWSL 431 (485)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEE-----C-SSSHHHH
T ss_pred HhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEE-----C-CCCHHHH
Confidence 88888 66432 33 578999999999999754 2344444 433 578888 3 3578999
Q ss_pred HHHHHHHH---cCch
Q 047540 331 EKLVRELM---EGEK 342 (388)
Q Consensus 331 ~~ai~~vl---~~~~ 342 (388)
.++|.+++ +|++
T Consensus 432 a~~i~~ll~~~~~~~ 446 (485)
T 2qzs_A 432 LRAIRRAFVLWSRPS 446 (485)
T ss_dssp HHHHHHHHHHHTSHH
T ss_pred HHHHHHHHHHcCCHH
Confidence 99999999 5664
No 52
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=94.83 E-value=0.17 Score=48.44 Aligned_cols=76 Identities=9% Similarity=0.017 Sum_probs=57.5
Q ss_pred hcCcccccccChHh---hhcCCCcceeee---ccCc-hhHHHHH-------hhCCcEEecCCccchhHhHHHHhhhhcee
Q 047540 248 KETGFIARWCPQEE---VLNHPAVGGFFT---HSGW-NSTIESL-------CAGVPMICWPFLGDQATNCRYTCNEWGVG 313 (388)
Q Consensus 248 ~~~~~v~~~~pq~~---~L~~~~~~~~It---hgG~-~s~~eal-------~~GvP~i~~P~~~DQ~~na~~v~~~~G~G 313 (388)
.+++.+.+++|+.+ +++.+++ ||. +-|. ++++||+ ++|+|+|+-.. + ..-..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcce
Confidence 45788899998654 7888888 553 2344 5689999 99999999755 4 444568
Q ss_pred EE-eeecCCCCCCCHHHHHHHHHHHHcCch
Q 047540 314 MD-ITNSGDDNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 314 ~~-l~~~~~~~~~~~~~l~~ai~~vl~~~~ 342 (388)
.. + + .-+.+++.++|.++++++.
T Consensus 331 ~l~v-----~-~~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 331 RFGY-----T-PGNADSVIAAITQALEAPR 354 (406)
T ss_dssp EEEE-----C-TTCHHHHHHHHHHHHHCCC
T ss_pred EEEe-----C-CCCHHHHHHHHHHHHhCcc
Confidence 88 7 3 3478999999999998764
No 53
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=94.29 E-value=0.079 Score=51.14 Aligned_cols=80 Identities=13% Similarity=0.021 Sum_probs=57.5
Q ss_pred cCcccccccChHh---hhcCCCcceeeecc---Cc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCC
Q 047540 249 ETGFIARWCPQEE---VLNHPAVGGFFTHS---GW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGD 321 (388)
Q Consensus 249 ~~~~v~~~~pq~~---~L~~~~~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 321 (388)
+++.+.+++|+.+ +++.+++ ||.-+ |. .+++||+++|+|+|+ -..+ ....+ +.-..|+.+
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv----- 361 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSL----- 361 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEE-----
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEe-----
Confidence 4677889988764 7888998 66422 44 467999999999998 3222 12233 443478888
Q ss_pred CCCCCHHHHHHHHHHHHcCch
Q 047540 322 DNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 322 ~~~~~~~~l~~ai~~vl~~~~ 342 (388)
+ .-+.++++++|.++++|++
T Consensus 362 ~-~~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 362 E-QLNPENIAETLVELCMSFN 381 (413)
T ss_dssp S-SCSHHHHHHHHHHHHHHTC
T ss_pred C-CCCHHHHHHHHHHHHcCHH
Confidence 3 3578899999999998876
No 54
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=90.92 E-value=1.4 Score=43.83 Aligned_cols=138 Identities=9% Similarity=0.011 Sum_probs=73.0
Q ss_pred CcEEEeeCCCcc-CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChH---hhhcCCC
Q 047540 192 SVVYVNFGSSVY-LTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQE---EVLNHPA 267 (388)
Q Consensus 192 ~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~---~~L~~~~ 267 (388)
..+++..|.... ...+.+.+.+..+.+.+.+++++..++... ...-.....+.+.++.+..+.++. .+++.++
T Consensus 327 ~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD 403 (536)
T 3vue_A 327 IPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKF---EKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGAD 403 (536)
T ss_dssp SCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHH---HHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCS
T ss_pred CcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchH---HHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhh
Confidence 445566677542 223333333334444556666554332100 000011223335666666666654 3778888
Q ss_pred cceeeecc---Cc-hhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCC----CCCCHHHHHHHHHHHHc
Q 047540 268 VGGFFTHS---GW-NSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDD----NQVGRNEVEKLVRELME 339 (388)
Q Consensus 268 ~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~----~~~~~~~l~~ai~~vl~ 339 (388)
+ ||.-+ |. .+++||+++|+|+|+-... .....| ..-..|..+.....+ ...+.+++.++|++++.
T Consensus 404 ~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V-~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 404 V--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTV-IEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp E--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHC-CBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred e--eecccccCCCCHHHHHHHHcCCCEEEcCCC----Cchhee-eCCCCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 8 66532 33 4789999999999986542 333334 443456654111111 12356789999988775
No 55
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=86.29 E-value=3.1 Score=38.28 Aligned_cols=96 Identities=9% Similarity=0.013 Sum_probs=57.7
Q ss_pred CCCcEEEeeCC-C-c--cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhh----cCc-cccccc--C
Q 047540 190 PNSVVYVNFGS-S-V--YLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAK----ETG-FIARWC--P 258 (388)
Q Consensus 190 ~~~~v~vs~Gs-~-~--~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~----~~~-~v~~~~--p 258 (388)
+++.|.+..|| . . ..+.+.+.++++.|.+.+.++++. +++... +....+.+..+ .++ .+.+.. .
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~-g~~~e~----~~~~~i~~~~~~~~~~~~~~l~g~~sl~ 253 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLF-GSAKDH----EAGNEILAALNTEQQAWCRNLAGETQLD 253 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEEC-CCGGGH----HHHHHHHTTSCHHHHTTEEECTTTSCHH
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEE-eChhhH----HHHHHHHHhhhhccccceEeccCcCCHH
Confidence 35788888888 3 2 356788888999887767777764 432100 00011111111 122 122222 2
Q ss_pred h-HhhhcCCCcceeeeccCchhHHHHHhhCCcEEec
Q 047540 259 Q-EEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICW 293 (388)
Q Consensus 259 q-~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~ 293 (388)
+ ..+++++++ +|+.- .|+++-|.+.|+|+|++
T Consensus 254 e~~ali~~a~l--~I~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 254 QAVILIAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp HHHHHHHTSSE--EEEES-SHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 2 458899998 99963 56677788999999986
No 56
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=83.93 E-value=9.6 Score=37.23 Aligned_cols=106 Identities=11% Similarity=0.098 Sum_probs=66.4
Q ss_pred ccccChHh---hhcCCCcceeee---ccCch-hHHHHHhhCC-----cEEecCCccchhHhHHHHhhhhceeEEeeecCC
Q 047540 254 ARWCPQEE---VLNHPAVGGFFT---HSGWN-STIESLCAGV-----PMICWPFLGDQATNCRYTCNEWGVGMDITNSGD 321 (388)
Q Consensus 254 ~~~~pq~~---~L~~~~~~~~It---hgG~~-s~~eal~~Gv-----P~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 321 (388)
.+++++.+ ++..+++ ||. +=|+| ++.||+++|+ |+|+--+.+- +..+ ..|+.+
T Consensus 337 ~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~----~~~l----~~g~lv----- 401 (482)
T 1uqt_A 337 NQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA----ANEL----TSALIV----- 401 (482)
T ss_dssp CSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG----GGTC----TTSEEE-----
T ss_pred CCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC----HHHh----CCeEEE-----
Confidence 56777764 7788888 654 33665 6899999998 6666544321 1112 356777
Q ss_pred CCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHh
Q 047540 322 DNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPVIKL 381 (388)
Q Consensus 322 ~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~~~ 381 (388)
+ .-+.++++++|.++|+++.. +.+++.++..+.+++ .+...-.+++++.|...
T Consensus 402 ~-p~d~~~lA~ai~~lL~~~~~-~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 402 N-PYDRDEVAAALDRALTMSLA-ERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp C-TTCHHHHHHHHHHHHTCCHH-HHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred C-CCCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 4 35788999999999986431 133444444444442 45566667777776554
No 57
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=79.88 E-value=2.1 Score=39.90 Aligned_cols=96 Identities=13% Similarity=0.147 Sum_probs=58.0
Q ss_pred CCCcEEEeeCCCc---cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcc-cccc--cCh-Hhh
Q 047540 190 PNSVVYVNFGSSV---YLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGF-IARW--CPQ-EEV 262 (388)
Q Consensus 190 ~~~~v~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~--~pq-~~~ 262 (388)
+++.|.+..|+.. ..+.+.+.++++.|.+.+.++++ ++++... +..+.+.+..+.+.. +.+- +.+ ..+
T Consensus 184 ~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl-~g~~~e~----~~~~~i~~~~~~~~~~l~g~~sl~e~~al 258 (349)
T 3tov_A 184 TDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVF-FGGPMDL----EMVQPVVEQMETKPIVATGKFQLGPLAAA 258 (349)
T ss_dssp TCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEE-CCCTTTH----HHHHHHHHTCSSCCEECTTCCCHHHHHHH
T ss_pred CCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE-EeCcchH----HHHHHHHHhcccccEEeeCCCCHHHHHHH
Confidence 3578999988853 35678888999988766888776 4433110 011112222222222 2222 223 348
Q ss_pred hcCCCcceeeeccCchhHHHHHhhCCcEEec
Q 047540 263 LNHPAVGGFFTHSGWNSTIESLCAGVPMICW 293 (388)
Q Consensus 263 L~~~~~~~~IthgG~~s~~eal~~GvP~i~~ 293 (388)
++++++ +|+. ..|.++=|.+.|+|+|++
T Consensus 259 i~~a~~--~i~~-DsG~~HlAaa~g~P~v~l 286 (349)
T 3tov_A 259 MNRCNL--LITN-DSGPMHVGISQGVPIVAL 286 (349)
T ss_dssp HHTCSE--EEEE-SSHHHHHHHTTTCCEEEE
T ss_pred HHhCCE--EEEC-CCCHHHHHHhcCCCEEEE
Confidence 899988 9997 234444488899999986
No 58
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=79.82 E-value=14 Score=36.31 Aligned_cols=111 Identities=11% Similarity=0.000 Sum_probs=71.5
Q ss_pred CcccccccChHh---hhcCCCcceeee---ccCchh-HHHHHhhC---CcEEecCCccchhHhHHHHhhhhceeEEeeec
Q 047540 250 TGFIARWCPQEE---VLNHPAVGGFFT---HSGWNS-TIESLCAG---VPMICWPFLGDQATNCRYTCNEWGVGMDITNS 319 (388)
Q Consensus 250 ~~~v~~~~pq~~---~L~~~~~~~~It---hgG~~s-~~eal~~G---vP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 319 (388)
.+.+...+|+.+ ++..+++ ||. +=|+|- ..|++++| .|+|+--+.+ .+..+ . ..|+.+
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l-~--~~allV--- 420 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVL-G--EYCRSV--- 420 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHH-G--GGSEEE---
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHh-C--CCEEEE---
Confidence 355566677644 7778888 443 358875 68999996 6665544433 12222 1 257888
Q ss_pred CCCCCCCHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHh
Q 047540 320 GDDNQVGRNEVEKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPVIKL 381 (388)
Q Consensus 320 ~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~~~ 381 (388)
+. -+.++++++|.++|+++. ++-+++.+++.+.++ ......=.+.|++.|...
T Consensus 421 --nP-~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 421 --NP-FDLVEQAEAISAALAAGP-RQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp --CT-TBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHHH
T ss_pred --CC-CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhhc
Confidence 43 588999999999998763 124555555555555 355666677888887665
No 59
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=71.37 E-value=4.8 Score=36.71 Aligned_cols=135 Identities=13% Similarity=0.034 Sum_probs=75.4
Q ss_pred CCCcEEEeeCCCc---cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhh---cCcccccc--cCh-H
Q 047540 190 PNSVVYVNFGSSV---YLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAK---ETGFIARW--CPQ-E 260 (388)
Q Consensus 190 ~~~~v~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~--~pq-~ 260 (388)
+++.|.+..|+.. ..+.+.+.++++.|.+.+.+++...++.. .....+++. .++.+.+- +.+ .
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~--------e~~~~~~i~~~~~~~~l~g~~sl~el~ 248 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH--------EEERAKRLAEGFAYVEVLPKMSLEGVA 248 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH--------HHHHHHHHHTTCTTEEECCCCCHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH--------HHHHHHHHHhhCCcccccCCCCHHHHH
Confidence 3578888888753 35678888899988776777665544221 011111111 12222222 223 3
Q ss_pred hhhcCCCcceeeeccCchhHHHHHhhCCcEEec--CCccchhHhHHHHhhhhce-eEEeeecCCC-CCCCHHHHHHHHHH
Q 047540 261 EVLNHPAVGGFFTHSGWNSTIESLCAGVPMICW--PFLGDQATNCRYTCNEWGV-GMDITNSGDD-NQVGRNEVEKLVRE 336 (388)
Q Consensus 261 ~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~--P~~~DQ~~na~~v~~~~G~-G~~l~~~~~~-~~~~~~~l~~ai~~ 336 (388)
.+++++++ +|+.- .|.++=|.+.|+|+|++ |...... + =+|- ...+....+. ..++.+++.+++++
T Consensus 249 ali~~a~l--~I~~D-SG~~HlAaa~g~P~v~lfg~t~p~~~--~-----P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~ 318 (326)
T 2gt1_A 249 RVLAGAKF--VVSVD-TGLSHLTAALDRPNITVYGPTDPGLI--G-----GYGKNQMVCRAPGNELSQLTANAVKQFIEE 318 (326)
T ss_dssp HHHHTCSE--EEEES-SHHHHHHHHTTCCEEEEESSSCHHHH--C-----CCSSSEEEEECGGGCGGGCCHHHHHHHHHH
T ss_pred HHHHhCCE--EEecC-CcHHHHHHHcCCCEEEEECCCChhhc--C-----CCCCCceEecCCcccccCCCHHHHHHHHHH
Confidence 58899998 99983 23333366699999998 4321110 0 0111 1122110011 47899999999999
Q ss_pred HHcCch
Q 047540 337 LMEGEK 342 (388)
Q Consensus 337 vl~~~~ 342 (388)
+|++.+
T Consensus 319 ~l~~~~ 324 (326)
T 2gt1_A 319 NAEKAA 324 (326)
T ss_dssp TTTTC-
T ss_pred HHHHhc
Confidence 987643
No 60
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=59.71 E-value=13 Score=38.16 Aligned_cols=41 Identities=20% Similarity=0.211 Sum_probs=29.8
Q ss_pred ccccChH---------hhhcCCCcceeeecc---Cc-hhHHHHHhhCCcEEecCCc
Q 047540 254 ARWCPQE---------EVLNHPAVGGFFTHS---GW-NSTIESLCAGVPMICWPFL 296 (388)
Q Consensus 254 ~~~~pq~---------~~L~~~~~~~~Ithg---G~-~s~~eal~~GvP~i~~P~~ 296 (388)
-.|++.. +++..+++ ||.-+ |+ .+++||+++|+|+|+--..
T Consensus 498 P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 498 PEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp CSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred ccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 4677653 47888888 66443 44 4789999999999996653
No 61
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=56.73 E-value=9.3 Score=34.17 Aligned_cols=51 Identities=18% Similarity=0.151 Sum_probs=35.1
Q ss_pred ceeeeccCchhHHHHHhh------CCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 269 GGFFTHSGWNSTIESLCA------GVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 269 ~~~IthgG~~s~~eal~~------GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
.++|+=||-||+++++.. ++|++++|.. .+| .+ ..+..+++.+++++++++
T Consensus 37 D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G------------~lg---fl------~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 37 EIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG------------HLG---FY------ADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp SEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS------------SCC---SS------CCBCGGGHHHHHHHHHTT
T ss_pred CEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC------------CCC---cC------CcCCHHHHHHHHHHHHcC
Confidence 349999999999998765 8899998851 112 11 234466677777777765
No 62
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=54.60 E-value=39 Score=27.98 Aligned_cols=100 Identities=9% Similarity=-0.005 Sum_probs=54.3
Q ss_pred hHHHHHhcCCCCCCCcEEEeeCC-CccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccc
Q 047540 178 TECLQWLDSKELPNSVVYVNFGS-SVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARW 256 (388)
Q Consensus 178 ~~l~~~l~~~~~~~~~v~vs~Gs-~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 256 (388)
.++-++|.+.. ...|+.|. .+. .....++..+.+..++-++..... +.+... . ....+.+.
T Consensus 35 ~~lg~~La~~g----~~lVsGGg~~Gi-----m~aa~~gAl~~gG~tigVlP~~~~-----~~~~~~---~-~~~i~~~~ 96 (176)
T 2iz6_A 35 NELGKQIATHG----WILLTGGRSLGV-----MHEAMKGAKEAGGTTIGVLPGPDT-----SEISDA---V-DIPIVTGL 96 (176)
T ss_dssp HHHHHHHHHTT----CEEEEECSSSSH-----HHHHHHHHHHTTCCEEEEECC----------CCTT---C-SEEEECCC
T ss_pred HHHHHHHHHCC----CEEEECCCccCH-----hHHHHHHHHHcCCEEEEEeCchhh-----hhhccC---C-ceeEEcCC
Confidence 45666776554 77777776 442 344445544556666666542210 011110 0 11223444
Q ss_pred cCh-Hhhh-cCCCcceeeeccCchhH---HHHHhhCCcEEecCCc
Q 047540 257 CPQ-EEVL-NHPAVGGFFTHSGWNST---IESLCAGVPMICWPFL 296 (388)
Q Consensus 257 ~pq-~~~L-~~~~~~~~IthgG~~s~---~eal~~GvP~i~~P~~ 296 (388)
.++ ..++ ..++ ..++--||.||+ .|++.+++|++.+|.+
T Consensus 97 ~~~Rk~~m~~~sd-a~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 97 GSARDNINALSSN-VLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp CSSSCCCCGGGCS-EEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHHhCC-EEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 444 3333 3444 356667888886 5567899999999983
No 63
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=52.34 E-value=10 Score=29.48 Aligned_cols=41 Identities=12% Similarity=0.086 Sum_probs=27.0
Q ss_pred HHHHHHHHhhcCCCCccEEEEcCCcch--HHHHHHH---hCCCeEEEc
Q 047540 29 PFLDLLQKLKSSSNSVSCIISDGFMPF--TVTAAQQ---LGIPIALFF 71 (388)
Q Consensus 29 ~~~~ll~~l~~~~~~~D~iI~D~~~~~--~~~~A~~---lgIP~v~~~ 71 (388)
.-++.++.+.+. +||+||.|..++. |..+++. .++|++.++
T Consensus 41 ~g~eAl~~~~~~--~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 41 RMQEALDIARKG--QFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp CHHHHHHHHHHC--CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CHHHHHHHHHhC--CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 344555555554 9999999998763 4455543 488977653
No 64
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=51.90 E-value=17 Score=37.32 Aligned_cols=117 Identities=9% Similarity=0.031 Sum_probs=72.2
Q ss_pred ccccChHhhhcCCCcceeeeccCchhHHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecC--CC-CCCCHHHH
Q 047540 254 ARWCPQEEVLNHPAVGGFFTHSGWNSTIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSG--DD-NQVGRNEV 330 (388)
Q Consensus 254 ~~~~pq~~~L~~~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~--~~-~~~~~~~l 330 (388)
.++.+-.++|..+++ .||-- .+.+.|.+..++|+|......|++.+- ..|. .....+ .. .--+.++|
T Consensus 604 ~~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~-----~rg~--y~d~~~~~pg~~~~~~~eL 673 (729)
T 3l7i_A 604 SNYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG-----LRGF--YMNYMEDLPGPIYTEPYGL 673 (729)
T ss_dssp TTCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS-----CCSB--SSCTTSSSSSCEESSHHHH
T ss_pred CCCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc-----cCCc--ccChhHhCCCCeECCHHHH
Confidence 445566779989998 99963 345789999999999988877765431 1122 220000 00 12577888
Q ss_pred HHHHHHHHcCchHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHhhh
Q 047540 331 EKLVRELMEGEKGMQMRNKASEWKRFAEEAAAPDGSSATNLEKLEQPVIKLIE 383 (388)
Q Consensus 331 ~~ai~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~s~~~~~~~v~~l~~~~~ 383 (388)
.++|........ .|+++.+++.+.+-.. ..|.++...++.+++......+
T Consensus 674 ~~~i~~~~~~~~--~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~~~~~ 723 (729)
T 3l7i_A 674 AKELKNLDKVQQ--QYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIKEQLE 723 (729)
T ss_dssp HHHHTTHHHHHH--HTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHHHHCC
T ss_pred HHHHhhhhccch--hHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCcCccc
Confidence 888887764322 3777777777766532 4555555556666665554433
No 65
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=50.77 E-value=18 Score=31.37 Aligned_cols=148 Identities=10% Similarity=0.024 Sum_probs=73.2
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhh-cCcccccccChHhhhcCCCcc
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAK-ETGFIARWCPQEEVLNHPAVG 269 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~pq~~~L~~~~~~ 269 (388)
+.+++|..|.++ ...++.|.+.|..+.++.. . +.+.+..-.. .++.+....-+...|..+++
T Consensus 32 k~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap-~--------~~~~l~~l~~~~~i~~i~~~~~~~dL~~adL- 94 (223)
T 3dfz_A 32 RSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAP-T--------VSAEINEWEAKGQLRVKRKKVGEEDLLNVFF- 94 (223)
T ss_dssp CCEEEECCSHHH-------HHHHHHHGGGCCCEEEECS-S--------CCHHHHHHHHTTSCEEECSCCCGGGSSSCSE-
T ss_pred CEEEEECCCHHH-------HHHHHHHHHCCCEEEEECC-C--------CCHHHHHHHHcCCcEEEECCCCHhHhCCCCE-
Confidence 678888766433 3455667777888776543 2 2233322211 12322221122345666666
Q ss_pred eeeeccCchhHHHHHhhCCcEEecCC-ccchhHhHH-----HHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCchH
Q 047540 270 GFFTHSGWNSTIESLCAGVPMICWPF-LGDQATNCR-----YTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEKG 343 (388)
Q Consensus 270 ~~IthgG~~s~~eal~~GvP~i~~P~-~~DQ~~na~-----~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~ 343 (388)
+|.--|.-.+.+.++.-.- ..+|. ..|.+..+. .+ ++-++-+.+.+.+ ..-.-+..|++.|.+.+... -
T Consensus 95 -VIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv-~rg~l~iaIST~G-~sP~la~~iR~~ie~~lp~~-~ 169 (223)
T 3dfz_A 95 -IVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQF-SRGRLSLAISTDG-ASPLLTKRIKEDLSSNYDES-Y 169 (223)
T ss_dssp -EEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEE-EETTEEEEEECTT-SCHHHHHHHHHHHHHHSCTH-H
T ss_pred -EEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEE-EeCCEEEEEECCC-CCcHHHHHHHHHHHHHccHH-H
Confidence 8887777666555443222 23332 234444332 22 3334445552111 12244566777777776432 1
Q ss_pred HHHHHHHHHHHHHHHHH
Q 047540 344 MQMRNKASEWKRFAEEA 360 (388)
Q Consensus 344 ~~~~~~a~~l~~~~~~~ 360 (388)
..+-+.+.++++.+++.
T Consensus 170 ~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 170 TQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 24777788888888865
No 66
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=50.36 E-value=20 Score=28.18 Aligned_cols=41 Identities=20% Similarity=0.336 Sum_probs=27.2
Q ss_pred HHHHHhhcCCCCccEEEEcCCcc--hHHHHHHHh-------CCCeEEEccCc
Q 047540 32 DLLQKLKSSSNSVSCIISDGFMP--FTVTAAQQL-------GIPIALFFTIA 74 (388)
Q Consensus 32 ~ll~~l~~~~~~~D~iI~D~~~~--~~~~~A~~l-------gIP~v~~~~~~ 74 (388)
+.++.+.+. +||+||.|..+| -|..+++.+ .+|++.++...
T Consensus 48 ~al~~~~~~--~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 48 TALPMLKKG--DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HHHHHHHHH--CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred HHHHHHHhC--CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 344444444 899999999886 366666654 58877765443
No 67
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=46.65 E-value=31 Score=31.95 Aligned_cols=99 Identities=14% Similarity=0.173 Sum_probs=49.9
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCC---C-----CCCch-hHHHhh-hcCccc-ccc---
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGE---T-----ADMPS-EFEVKA-KETGFI-ARW--- 256 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~---~-----~~~~~-~~~~~~-~~~~~v-~~~--- 256 (388)
+.+++.+.||.+.. .-...++++|.+.|..++|+......+.. . ..++. ++..+. ..+... ..+
T Consensus 3 ~~i~i~~GGTgGHi--~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 80 (365)
T 3s2u_A 3 GNVLIMAGGTGGHV--FPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKS 80 (365)
T ss_dssp CEEEEECCSSHHHH--HHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHHHH
T ss_pred CcEEEEcCCCHHHH--HHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHH
Confidence 35666666774432 12345888899999999998754321100 0 00010 000000 000000 000
Q ss_pred cCh-Hhhhc--CCCcceeeeccCchhH---HHHHhhCCcEEec
Q 047540 257 CPQ-EEVLN--HPAVGGFFTHSGWNST---IESLCAGVPMICW 293 (388)
Q Consensus 257 ~pq-~~~L~--~~~~~~~IthgG~~s~---~eal~~GvP~i~~ 293 (388)
+.+ ..++. .|++ +|++||.-+. ..|-..|+|+++.
T Consensus 81 ~~~~~~~l~~~~PDv--Vi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 81 LFQALRVIRQLRPVC--VLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HHHHHHHHHHHCCSE--EEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhcCCCE--EEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 111 12343 5777 9999998664 5677889999863
No 68
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=46.41 E-value=23 Score=29.87 Aligned_cols=45 Identities=13% Similarity=0.135 Sum_probs=36.0
Q ss_pred cHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEccCchh
Q 047540 27 LQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFFTIAAR 76 (388)
Q Consensus 27 ~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~~~~~ 76 (388)
....+..+++++++ ++|+||-|. .+..+|+++|+|.+.+.+...+
T Consensus 128 ~~e~~~~i~~l~~~--G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 128 EDEITTLISKVKTE--NIKIVVSGK---TVTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp GGGHHHHHHHHHHT--TCCEEEECH---HHHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHHHHHHHC--CCeEEECCH---HHHHHHHHcCCcEEEEecCHHH
Confidence 35677888888877 999999886 4578999999999998765443
No 69
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=45.70 E-value=35 Score=25.30 Aligned_cols=43 Identities=23% Similarity=0.209 Sum_probs=28.4
Q ss_pred HHHHHHHHhhcCCCCccEEEEcCCcc--hHHHHHHHh-------CCCeEEEccC
Q 047540 29 PFLDLLQKLKSSSNSVSCIISDGFMP--FTVTAAQQL-------GIPIALFFTI 73 (388)
Q Consensus 29 ~~~~ll~~l~~~~~~~D~iI~D~~~~--~~~~~A~~l-------gIP~v~~~~~ 73 (388)
...+.++.+.+. +||+||.|...+ -+..+.+.+ ++|++.++..
T Consensus 34 ~~~~al~~l~~~--~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 34 NGQIALEKLSEF--TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp SHHHHHHHHTTB--CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred CHHHHHHHHHhc--CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
Confidence 345566666554 899999998765 355555543 5788777544
No 70
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=44.92 E-value=54 Score=30.15 Aligned_cols=75 Identities=8% Similarity=0.117 Sum_probs=57.8
Q ss_pred cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHH
Q 047540 203 YLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIE 282 (388)
Q Consensus 203 ~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~e 282 (388)
..+.+....+.+++.+.....||...+... ..++.++++...+-.+|++ ||-++....++-
T Consensus 61 g~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~ 121 (331)
T 4e5s_A 61 SSISSRVQDLHEAFRDPNVKAILTTLGGYN-----------------SNGLLKYLDYDLIRENPKF--FCGYSDITALNN 121 (331)
T ss_dssp CCHHHHHHHHHHHHHCTTEEEEEESCCCSC-----------------GGGGGGGCCHHHHHTSCCE--EEECGGGHHHHH
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcccccc-----------------HHHHHhhcChhHHHhCCeE--EEEecchHHHHH
Confidence 344577888999999988888988876531 2456777777667778877 999999988888
Q ss_pred HHh--hCCcEEecCCc
Q 047540 283 SLC--AGVPMICWPFL 296 (388)
Q Consensus 283 al~--~GvP~i~~P~~ 296 (388)
+++ .|++.+.=|+.
T Consensus 122 al~~~~G~~t~hGp~~ 137 (331)
T 4e5s_A 122 AIYTKTGLVTYSGPHF 137 (331)
T ss_dssp HHHHHHCBCEEECCCG
T ss_pred HHHHhhCCcEEEccch
Confidence 887 59998887763
No 71
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=43.40 E-value=1.9e+02 Score=26.12 Aligned_cols=108 Identities=13% Similarity=0.169 Sum_probs=57.7
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcce
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNS-NHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGG 270 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~ 270 (388)
.+.+|..|.++. .++.++.+. +..++.+...+ ++. .+...+...+.-+-...+++..+++.+
T Consensus 6 rvgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~---------~~~-~~~~a~~~g~~~~~~~~~~l~~~~~D~ 68 (344)
T 3euw_A 6 RIALFGAGRIGH-------VHAANIAANPDLELVVIADPF---------IEG-AQRLAEANGAEAVASPDEVFARDDIDG 68 (344)
T ss_dssp EEEEECCSHHHH-------HHHHHHHHCTTEEEEEEECSS---------HHH-HHHHHHTTTCEEESSHHHHTTCSCCCE
T ss_pred EEEEECCcHHHH-------HHHHHHHhCCCcEEEEEECCC---------HHH-HHHHHHHcCCceeCCHHHHhcCCCCCE
Confidence 356676666542 345555554 45555555432 111 111111111333445667888555555
Q ss_pred eeeccCch----hHHHHHhhCCcEEe-cCCcc--chhHhHHHHhhhhceeEEe
Q 047540 271 FFTHSGWN----STIESLCAGVPMIC-WPFLG--DQATNCRYTCNEWGVGMDI 316 (388)
Q Consensus 271 ~IthgG~~----s~~eal~~GvP~i~-~P~~~--DQ~~na~~v~~~~G~G~~l 316 (388)
++--.-.. -+.+++.+|+++++ -|+.. ++-.-...++++.|+-+.+
T Consensus 69 V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v 121 (344)
T 3euw_A 69 IVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVML 121 (344)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEE
T ss_pred EEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEe
Confidence 66544333 36788999999988 67654 3433333334666776666
No 72
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=42.84 E-value=1e+02 Score=25.41 Aligned_cols=113 Identities=12% Similarity=0.097 Sum_probs=63.0
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCccc---ccccChHhhhcCCCc
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFI---ARWCPQEEVLNHPAV 268 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v---~~~~pq~~~L~~~~~ 268 (388)
.+++.-.|+++... ...+++.|.+.+..+-.+....-.. -+.....+...+.++. ..|+++.++-..+++
T Consensus 7 ~IllgvTGs~aa~k---~~~ll~~L~~~g~~V~vv~T~~A~~----fi~~~~l~~l~~~v~~~~~~~~~~hi~l~~~aD~ 79 (175)
T 3qjg_A 7 NVLICLCGSVNSIN---ISHYIIELKSKFDEVNVIASTNGRK----FINGEILKQFCDNYYDEFEDPFLNHVDIANKHDK 79 (175)
T ss_dssp EEEEEECSSGGGGG---HHHHHHHHTTTCSEEEEEECTGGGG----GSCHHHHHHHCSCEECTTTCTTCCHHHHHHTCSE
T ss_pred EEEEEEeCHHHHHH---HHHHHHHHHHCCCEEEEEECcCHHH----HhhHHHHHHhcCCEEecCCCCccccccccchhCE
Confidence 56666667765542 4456777777787765555432110 0111112222332221 134556666555654
Q ss_pred ceeeeccCchhHHH-------------HHhhCCcEEecCCcc----c---hhHhHHHHhhhhcee
Q 047540 269 GGFFTHSGWNSTIE-------------SLCAGVPMICWPFLG----D---QATNCRYTCNEWGVG 313 (388)
Q Consensus 269 ~~~IthgG~~s~~e-------------al~~GvP~i~~P~~~----D---Q~~na~~v~~~~G~G 313 (388)
.+|.-|-+||+.. ++..++|+++.|-.. . ...|-..+ .++|+=
T Consensus 80 -~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L-~~~G~~ 142 (175)
T 3qjg_A 80 -IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLL-KDYGVS 142 (175)
T ss_dssp -EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHH-HHTTCE
T ss_pred -EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHH-HHCCCE
Confidence 5778788776643 367799999999432 2 24577777 556763
No 73
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=40.93 E-value=1.5e+02 Score=24.48 Aligned_cols=142 Identities=11% Similarity=0.084 Sum_probs=75.1
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcce
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGG 270 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~ 270 (388)
+|.|-|-+||.+ +...+++..+.|+..+.++-..+-+- ...|+.+.+- +. -.....+++
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA------HRtp~~l~~~----------~~---~a~~~g~~V 80 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------HRTPDYMFEY----------AE---TARERGLKV 80 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHH----------HH---HTTTTTCCE
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc------ccChHHHHHH----------HH---HHHhcCceE
Confidence 578888899976 45677888888888898765544321 1144433211 10 011123445
Q ss_pred eeeccCch----hHHHHHhhCCcEEecCCccc---hhHhHHHHhhhhceeEEeeecCCC--CCCCHHHHHHHHHHHH--c
Q 047540 271 FFTHSGWN----STIESLCAGVPMICWPFLGD---QATNCRYTCNEWGVGMDITNSGDD--NQVGRNEVEKLVRELM--E 339 (388)
Q Consensus 271 ~IthgG~~----s~~eal~~GvP~i~~P~~~D---Q~~na~~v~~~~G~G~~l~~~~~~--~~~~~~~l~~ai~~vl--~ 339 (388)
+|.=+|.- ++..+ ..-+|+|.+|.... -.+.---+ .+.-.|+-+.+..-+ .-.++.-++. ++| .
T Consensus 81 iIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSi-vQMP~GvpVaTvaig~~ga~NAallA~---qILa~~ 155 (181)
T 4b4k_A 81 IIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSI-VQMPGGVPVATVAIGKAGSTNAGLLAA---QILGSF 155 (181)
T ss_dssp EEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHH-HTCCTTCCCEECCSSHHHHHHHHHHHH---HHHTTT
T ss_pred EEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHH-HhCCCCCceEEEecCCccHHHHHHHHH---HHHccC
Confidence 88877743 34433 45689999998543 22323333 233445444110001 0011222222 344 4
Q ss_pred CchHHHHHHHHHHHHHHHHHHh
Q 047540 340 GEKGMQMRNKASEWKRFAEEAA 361 (388)
Q Consensus 340 ~~~~~~~~~~a~~l~~~~~~~~ 361 (388)
|++ ++++.+..++..++.+
T Consensus 156 d~~---l~~kl~~~r~~~~~~v 174 (181)
T 4b4k_A 156 HDD---IHDALELRREAIEKDV 174 (181)
T ss_dssp CHH---HHHHHHHHHHHHHHHH
T ss_pred CHH---HHHHHHHHHHHHHHHH
Confidence 665 7888777777766543
No 74
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=39.32 E-value=1.3e+02 Score=27.62 Aligned_cols=109 Identities=12% Similarity=0.047 Sum_probs=58.1
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCCCCCCCchhHHHhhhcCc-ccccccChHhhhcCCCcc
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNS-NHPFLWIIRPDLVTGETADMPSEFEVKAKETG-FIARWCPQEEVLNHPAVG 269 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~pq~~~L~~~~~~ 269 (388)
.+.+|..|.++. ..++.++.+. +..++.+...+ .+-.+...+.. ...-+-+..++|..+++.
T Consensus 7 rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~----------~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD 70 (359)
T 3m2t_A 7 KVGLVGIGAQMQ------ENLLPSLLQMQDIRIVAACDSD----------LERARRVHRFISDIPVLDNVPAMLNQVPLD 70 (359)
T ss_dssp EEEEECCSHHHH------HTHHHHHHTCTTEEEEEEECSS----------HHHHGGGGGTSCSCCEESSHHHHHHHSCCS
T ss_pred eEEEECCCHHHH------HHHHHHHHhCCCcEEEEEEcCC----------HHHHHHHHHhcCCCcccCCHHHHhcCCCCC
Confidence 456676666431 1245666655 45655555432 11111222221 122234556788877666
Q ss_pred eeeeccCch----hHHHHHhhCCcEEe-cCCccc--hhHhHHHHhhhhceeEEe
Q 047540 270 GFFTHSGWN----STIESLCAGVPMIC-WPFLGD--QATNCRYTCNEWGVGMDI 316 (388)
Q Consensus 270 ~~IthgG~~----s~~eal~~GvP~i~-~P~~~D--Q~~na~~v~~~~G~G~~l 316 (388)
+++-..-.. -+.+++.+|++++| -|+..+ +-.-...++++.|+=+.+
T Consensus 71 ~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v 124 (359)
T 3m2t_A 71 AVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGV 124 (359)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 566544433 25678999999888 677543 443333333566766665
No 75
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=38.80 E-value=1.8e+02 Score=26.35 Aligned_cols=127 Identities=14% Similarity=0.101 Sum_probs=66.4
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcC--CCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcc
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNS--NHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVG 269 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~ 269 (388)
.+.+|..|.++. ..+.++.+. +..++.+...+ ++. .++..+...+..+-+..++|..+++.
T Consensus 15 rvgiiG~G~~g~-------~~~~~l~~~~~~~~lvav~d~~---------~~~-~~~~~~~~~~~~~~~~~~ll~~~~~D 77 (354)
T 3q2i_A 15 RFALVGCGRIAN-------NHFGALEKHADRAELIDVCDID---------PAA-LKAAVERTGARGHASLTDMLAQTDAD 77 (354)
T ss_dssp EEEEECCSTTHH-------HHHHHHHHTTTTEEEEEEECSS---------HHH-HHHHHHHHCCEEESCHHHHHHHCCCS
T ss_pred eEEEEcCcHHHH-------HHHHHHHhCCCCeEEEEEEcCC---------HHH-HHHHHHHcCCceeCCHHHHhcCCCCC
Confidence 577888887652 344555554 45666555432 111 11111111123344567788755554
Q ss_pred eeeeccCc----hhHHHHHhhCCcEEe-cCCcc--chhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 270 GFFTHSGW----NSTIESLCAGVPMIC-WPFLG--DQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 270 ~~IthgG~----~s~~eal~~GvP~i~-~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
+++--.-. .-+.+++.+|+++++ -|+.. ++-.-...++++.|+-+.+ .....-....+.+++++.+
T Consensus 78 ~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v-----~~~~r~~p~~~~~k~~i~~ 150 (354)
T 3q2i_A 78 IVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFV-----VKQNRRNATLQLLKRAMQE 150 (354)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEE-----CCGGGGSHHHHHHHHHHHT
T ss_pred EEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEE-----EEcccCCHHHHHHHHHHhc
Confidence 45542222 236778999999988 68754 3433333334666776666 4222222234455566543
No 76
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=38.10 E-value=85 Score=26.82 Aligned_cols=102 Identities=18% Similarity=0.112 Sum_probs=50.7
Q ss_pred hHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCccccccc
Q 047540 178 TECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWC 257 (388)
Q Consensus 178 ~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 257 (388)
.++-++|.+.. ...|+.|... ..+....++....+..++=++.... .+.......-....+...+
T Consensus 35 ~~lg~~LA~~G----~~vVsGGg~~----GiM~aa~~gAl~~GG~tiGVlP~~~-------~~~e~~~~~~~~~~~~~~f 99 (215)
T 2a33_A 35 VDLGNELVSRN----IDLVYGGGSI----GLMGLVSQAVHDGGRHVIGIIPKTL-------MPRELTGETVGEVRAVADM 99 (215)
T ss_dssp HHHHHHHHHTT----CEEEECCCSS----HHHHHHHHHHHHTTCCEEEEEESSC-------C--------CCEEEEESSH
T ss_pred HHHHHHHHHCC----CEEEECCChh----hHhHHHHHHHHHcCCcEEEEcchHh-------cchhhccCCCCceeecCCH
Confidence 34555565554 6666665531 2334444555555556555543221 1111100000112234444
Q ss_pred Ch-Hhhh-cCCCcceeeeccCchhHHHHHh---------hCCcEEecCC
Q 047540 258 PQ-EEVL-NHPAVGGFFTHSGWNSTIESLC---------AGVPMICWPF 295 (388)
Q Consensus 258 pq-~~~L-~~~~~~~~IthgG~~s~~eal~---------~GvP~i~~P~ 295 (388)
++ ..++ ..++ ..++--||.||+-|... +++|++.+-.
T Consensus 100 ~~Rk~~~~~~sd-a~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 100 HQRKAEMAKHSD-AFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp HHHHHHHHHTCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred HHHHHHHHHhCC-EEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 53 3344 3444 45777899999877652 4899998865
No 77
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=37.69 E-value=51 Score=28.71 Aligned_cols=37 Identities=22% Similarity=0.289 Sum_probs=26.9
Q ss_pred HHHHHHhhcCCCCccEEEEcCCcc-------hHHHHHHHhCCCeEEE
Q 047540 31 LDLLQKLKSSSNSVSCIISDGFMP-------FTVTAAQQLGIPIALF 70 (388)
Q Consensus 31 ~~ll~~l~~~~~~~D~iI~D~~~~-------~~~~~A~~lgIP~v~~ 70 (388)
.++++.+. .+||+|++|.+-. -|..+.-.+++|+|.+
T Consensus 98 l~al~~L~---~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 141 (237)
T 3goc_A 98 LAALDALP---CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGV 141 (237)
T ss_dssp HHHHHTSS---SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEE
T ss_pred HHHHHhcC---CCCCEEEEeCceeecCCCcchhheeeeecCCCEEee
Confidence 34444443 4899999998654 3677788889999987
No 78
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=37.58 E-value=78 Score=28.94 Aligned_cols=74 Identities=4% Similarity=0.111 Sum_probs=55.9
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHHH
Q 047540 204 LTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIES 283 (388)
Q Consensus 204 ~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~ea 283 (388)
.+.+....+.+++.+.....||...+.. ...++.++++...+-.+|+. ||-++-..+++-+
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG~-----------------g~~rlL~~LD~~~i~~~PK~--~~GySDiT~L~~a 122 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGGF-----------------NSNQLLPYLDYDLISENPKI--LCGFSDITALATA 122 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS-----------------CGGGGGGGCCHHHHHHSCCE--EEECTTHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCch-----------------hHHHHhhhcchhhhccCCeE--EEecccccHHHHH
Confidence 3457788899999999999898877553 13466777877778788877 9999888888888
Q ss_pred Hh--hCCcEEecCCc
Q 047540 284 LC--AGVPMICWPFL 296 (388)
Q Consensus 284 l~--~GvP~i~~P~~ 296 (388)
++ .|+..+.=|+.
T Consensus 123 l~~~~g~~t~hGp~~ 137 (327)
T 4h1h_A 123 IYTQTELITYSGAHF 137 (327)
T ss_dssp HHHHHCBCEEECCCT
T ss_pred HHHhcCeEEEeCcch
Confidence 75 47777766653
No 79
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=37.22 E-value=22 Score=30.69 Aligned_cols=98 Identities=14% Similarity=0.036 Sum_probs=52.3
Q ss_pred hHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcC----ccc
Q 047540 178 TECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKET----GFI 253 (388)
Q Consensus 178 ~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~----~~v 253 (388)
.++-++|.+.. ...|+.|.. ...+....++..+.+..++=++.... +|. ....| ..+
T Consensus 31 ~~lg~~LA~~g----~~lV~GGg~----~GlM~aa~~gA~~~GG~~iGv~p~~l-------~~~----e~~~~~~~~~~~ 91 (216)
T 1ydh_A 31 IELGNELVKRK----IDLVYGGGS----VGLMGLISRRVYEGGLHVLGIIPKAL-------MPI----EISGETVGDVRV 91 (216)
T ss_dssp HHHHHHHHHTT----CEEEECCCS----SHHHHHHHHHHHHTTCCEEEEEEGGG-------HHH----HCCSSCCSEEEE
T ss_pred HHHHHHHHHCC----CEEEECCCc----ccHhHHHHHHHHHcCCcEEEEechhc-------Ccc----ccccCCCCcccc
Confidence 34556666554 666666552 13445555665556666665543210 000 11111 223
Q ss_pred ccccCh-Hh-hhcCCCcceeeeccCchhHHHHH---------hhCCcEEecCC
Q 047540 254 ARWCPQ-EE-VLNHPAVGGFFTHSGWNSTIESL---------CAGVPMICWPF 295 (388)
Q Consensus 254 ~~~~pq-~~-~L~~~~~~~~IthgG~~s~~eal---------~~GvP~i~~P~ 295 (388)
....+. .. +..+++. .++--||.||+-|.. .+++|++.+-.
T Consensus 92 ~~~~~~Rk~~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 92 VADMHERKAAMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp ESSHHHHHHHHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred cCCHHHHHHHHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 333332 23 3344553 567789999987765 47999999864
No 80
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=37.16 E-value=44 Score=28.90 Aligned_cols=29 Identities=17% Similarity=0.184 Sum_probs=23.7
Q ss_pred cceeeeccCchhHHHHHhhCCcEEecCCcc
Q 047540 268 VGGFFTHSGWNSTIESLCAGVPMICWPFLG 297 (388)
Q Consensus 268 ~~~~IthgG~~s~~eal~~GvP~i~~P~~~ 297 (388)
+.++|++||........ ..+|+|-+|..+
T Consensus 64 ~dVIISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeEEEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 34499999998888875 579999999854
No 81
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=36.13 E-value=63 Score=27.96 Aligned_cols=43 Identities=12% Similarity=0.010 Sum_probs=28.6
Q ss_pred HHHHHHHHHhhcCCCCccEEEEcCCcch-------HHHHHHHhCCCeEEE
Q 047540 28 QPFLDLLQKLKSSSNSVSCIISDGFMPF-------TVTAAQQLGIPIALF 70 (388)
Q Consensus 28 ~~~~~ll~~l~~~~~~~D~iI~D~~~~~-------~~~~A~~lgIP~v~~ 70 (388)
..+..+++.+.+-...||+|++|..... |..+.-.+++|+|.+
T Consensus 88 RE~P~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGV 137 (225)
T 2w36_A 88 REGPLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGV 137 (225)
T ss_dssp HHHHHHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred hhhHHHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEE
Confidence 3344444444332247999999986553 556677779999987
No 82
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=36.09 E-value=51 Score=27.81 Aligned_cols=97 Identities=13% Similarity=0.049 Sum_probs=54.3
Q ss_pred chHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccc--
Q 047540 177 ETECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIA-- 254 (388)
Q Consensus 177 ~~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-- 254 (388)
-.++-++|.+.. ...|+.|.. .......++..+.+..++-++..... +..+ ....+.
T Consensus 47 A~~lg~~LA~~G----~~vVsGg~~-----GiM~aa~~gAl~~GG~~iGVlP~e~~-------~~~~-----~~~~~~~~ 105 (195)
T 1rcu_A 47 CLELGRTLAKKG----YLVFNGGRD-----GVMELVSQGVREAGGTVVGILPDEEA-------GNPY-----LSVAVKTG 105 (195)
T ss_dssp HHHHHHHHHHTT----CEEEECCSS-----HHHHHHHHHHHHTTCCEEEEESTTCC-------CCTT-----CSEEEECC
T ss_pred HHHHHHHHHHCC----CEEEeCCHH-----HHHHHHHHHHHHcCCcEEEEeCCccc-------CCCC-----cceeeecC
Confidence 345667776654 667775443 34455556655566677766643110 0100 112222
Q ss_pred cccC-hHhhh-cCCCcceeeeccCchhH---HHHHhhCCcEEecCC
Q 047540 255 RWCP-QEEVL-NHPAVGGFFTHSGWNST---IESLCAGVPMICWPF 295 (388)
Q Consensus 255 ~~~p-q~~~L-~~~~~~~~IthgG~~s~---~eal~~GvP~i~~P~ 295 (388)
...+ ...++ ..++ ..++--||.||+ .|++.+++|+++++.
T Consensus 106 ~~f~~Rk~~m~~~sd-a~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 106 LDFQMRSFVLLRNAD-VVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp CCHHHHHHHHHTTCS-EEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred CCHHHHHHHHHHhCC-EEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 2233 34444 4454 456777999986 456889999999974
No 83
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=35.70 E-value=32 Score=29.81 Aligned_cols=40 Identities=13% Similarity=0.309 Sum_probs=33.8
Q ss_pred cHHHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEEc
Q 047540 27 LQPFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALFF 71 (388)
Q Consensus 27 ~~~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~ 71 (388)
....+..+++++++ ++|+||-|. .+..+|+++|+|.+.+.
T Consensus 140 ~ee~~~~i~~l~~~--G~~vVVG~~---~~~~~A~~~Gl~~vlI~ 179 (225)
T 2pju_A 140 EEDARGQINELKAN--GTEAVVGAG---LITDLAEEAGMTGIFIY 179 (225)
T ss_dssp HHHHHHHHHHHHHT--TCCEEEESH---HHHHHHHHTTSEEEESS
T ss_pred HHHHHHHHHHHHHC--CCCEEECCH---HHHHHHHHcCCcEEEEC
Confidence 45778888888887 999999886 45789999999999986
No 84
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=35.55 E-value=41 Score=25.80 Aligned_cols=42 Identities=19% Similarity=0.251 Sum_probs=26.7
Q ss_pred HHHHHHHhhcCCCCccEEEEcCCcc--hHHHHHHHh---------CCCeEEEccC
Q 047540 30 FLDLLQKLKSSSNSVSCIISDGFMP--FTVTAAQQL---------GIPIALFFTI 73 (388)
Q Consensus 30 ~~~ll~~l~~~~~~~D~iI~D~~~~--~~~~~A~~l---------gIP~v~~~~~ 73 (388)
.++.++.+... +||+||.|...+ -+..+++.+ .+|++.++..
T Consensus 47 ~~~al~~~~~~--~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 47 AEQVLDAMAEE--DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp HHHHHHHHHHS--CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred HHHHHHHHhcC--CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 34555555544 899999998665 355555544 2777776543
No 85
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=35.15 E-value=58 Score=24.59 Aligned_cols=42 Identities=19% Similarity=0.275 Sum_probs=26.7
Q ss_pred HHHHHHHhhcCCCCccEEEEcCCcc--hHHHHHHHh-------CCCeEEEccC
Q 047540 30 FLDLLQKLKSSSNSVSCIISDGFMP--FTVTAAQQL-------GIPIALFFTI 73 (388)
Q Consensus 30 ~~~ll~~l~~~~~~~D~iI~D~~~~--~~~~~A~~l-------gIP~v~~~~~ 73 (388)
.++.++.+... +||+||.|...+ -+..+++.+ .+|++.++..
T Consensus 37 ~~~al~~~~~~--~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~ 87 (136)
T 3t6k_A 37 GEEALQQIYKN--LPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQ 87 (136)
T ss_dssp HHHHHHHHHHS--CCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECT
T ss_pred HHHHHHHHHhC--CCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecC
Confidence 44555555544 899999998765 355554433 5787776544
No 86
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=34.84 E-value=55 Score=27.44 Aligned_cols=63 Identities=14% Similarity=0.140 Sum_probs=42.5
Q ss_pred HhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCchH----HHHHHHHHHHHHHHHH--H--hCCCCChHHHHHHHHHH
Q 047540 306 TCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEKG----MQMRNKASEWKRFAEE--A--AAPDGSSATNLEKLEQP 377 (388)
Q Consensus 306 v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~----~~~~~~a~~l~~~~~~--~--~~~gg~s~~~~~~~v~~ 377 (388)
..+..|+|+.+ |+|+|.++|.++++..+- +.|+ |.-.+-..+|. . |.++..-...+++-+-.
T Consensus 107 Fe~~cGVGV~V---------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD~~~l~ 176 (187)
T 3tl4_X 107 MNENSGVGIEI---------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIIDQEVLK 176 (187)
T ss_dssp HHHTTTTTCCC---------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHHHHHHH
T ss_pred HHHHCCCCeEe---------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHHHHHHH
Confidence 34778998887 899999999999965321 2366 66666666664 2 45666666666655444
Q ss_pred H
Q 047540 378 V 378 (388)
Q Consensus 378 l 378 (388)
+
T Consensus 177 l 177 (187)
T 3tl4_X 177 L 177 (187)
T ss_dssp H
T ss_pred H
Confidence 3
No 87
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=34.51 E-value=1.9e+02 Score=23.68 Aligned_cols=144 Identities=12% Similarity=0.064 Sum_probs=76.9
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcce
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGG 270 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~ 270 (388)
+|.|-|-+||.+ +....++....|+..+.++-..+-+- ...|+.+.+-. .+ ...-.+++
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~~~----------~~---a~~~g~~V 69 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------HRTPDYMFEYA----------ET---ARERGLKV 69 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHHH----------HH---TTTTTCCE
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec------cCCHHHHHHHH----------HH---HHhCCCcE
Confidence 578888888865 45777888888888888865544321 11444322110 00 01111334
Q ss_pred eeeccCch----hHHHHHhhCCcEEecCCccc--hhHhHH-HHhhh--hceeEEeeecCCC--CCCCHHHHHHHHHHHHc
Q 047540 271 FFTHSGWN----STIESLCAGVPMICWPFLGD--QATNCR-YTCNE--WGVGMDITNSGDD--NQVGRNEVEKLVRELME 339 (388)
Q Consensus 271 ~IthgG~~----s~~eal~~GvP~i~~P~~~D--Q~~na~-~v~~~--~G~G~~l~~~~~~--~~~~~~~l~~ai~~vl~ 339 (388)
||.=+|.. ++..++ .-+|+|.+|.... .-..+- -+ .+ -|+.+.. ..=+ ...++.-++..|- -+.
T Consensus 70 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSi-vqmP~GvpVat--V~I~~a~~~nAallAaqIl-a~~ 144 (170)
T 1xmp_A 70 IIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSI-VQMPGGVPVAT--VAIGKAGSTNAGLLAAQIL-GSF 144 (170)
T ss_dssp EEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHH-HCCCTTCCCEE--CCSSHHHHHHHHHHHHHHH-HTT
T ss_pred EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHH-hcCCCCCeeEE--EecCCcchHHHHHHHHHHH-ccC
Confidence 88877754 333333 4689999998542 222322 12 22 2443221 0002 1234444444443 245
Q ss_pred CchHHHHHHHHHHHHHHHHHHhCC
Q 047540 340 GEKGMQMRNKASEWKRFAEEAAAP 363 (388)
Q Consensus 340 ~~~~~~~~~~a~~l~~~~~~~~~~ 363 (388)
|++ ++++.+..++..++.+.+
T Consensus 145 d~~---l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 145 HDD---IHDALELRREAIEKDVRE 165 (170)
T ss_dssp CHH---HHHHHHHHHHHHHHHHHC
T ss_pred CHH---HHHHHHHHHHHHHHHHHh
Confidence 666 888888888877765433
No 88
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=34.41 E-value=2.3e+02 Score=25.28 Aligned_cols=61 Identities=8% Similarity=0.089 Sum_probs=38.1
Q ss_pred ccChHhhhcCCCcceeeeccCc----hhHHHHHhhCCcEEe-cCCcc--chhHhHHHHhhhhceeEEe
Q 047540 256 WCPQEEVLNHPAVGGFFTHSGW----NSTIESLCAGVPMIC-WPFLG--DQATNCRYTCNEWGVGMDI 316 (388)
Q Consensus 256 ~~pq~~~L~~~~~~~~IthgG~----~s~~eal~~GvP~i~-~P~~~--DQ~~na~~v~~~~G~G~~l 316 (388)
+-+..+++..+++.+++.---. .-+.+++.+|+++++ -|+.. ++-.-...++++.|+-+.+
T Consensus 52 ~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v 119 (331)
T 4hkt_A 52 VRTIDAIEAAADIDAVVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMV 119 (331)
T ss_dssp ECCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHhcCCCCCEEEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 5566778886655556543222 346788999999988 57644 4433333344667877777
No 89
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=34.33 E-value=68 Score=23.47 Aligned_cols=43 Identities=14% Similarity=0.204 Sum_probs=27.3
Q ss_pred HHHHHHHHhhcCCCCccEEEEcCCcc--hHHHHHHH----hCCCeEEEccC
Q 047540 29 PFLDLLQKLKSSSNSVSCIISDGFMP--FTVTAAQQ----LGIPIALFFTI 73 (388)
Q Consensus 29 ~~~~ll~~l~~~~~~~D~iI~D~~~~--~~~~~A~~----lgIP~v~~~~~ 73 (388)
...+.++.+... +||+||.|...+ -+..+.+. ..+|.+.++..
T Consensus 34 ~~~~al~~~~~~--~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~ 82 (120)
T 3f6p_A 34 DGNEAVEMVEEL--QPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAK 82 (120)
T ss_dssp SHHHHHHHHHTT--CCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEES
T ss_pred CHHHHHHHHhhC--CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECC
Confidence 345556665554 899999998765 34444443 36787776543
No 90
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=34.06 E-value=1.1e+02 Score=27.86 Aligned_cols=76 Identities=14% Similarity=0.206 Sum_probs=57.8
Q ss_pred ccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhc-CCCcceeeeccCchhH
Q 047540 202 VYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLN-HPAVGGFFTHSGWNST 280 (388)
Q Consensus 202 ~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~-~~~~~~~IthgG~~s~ 280 (388)
+..+.+....+.+++.+.....||..++.. ...++.++++...+-. +|++ ||-++....+
T Consensus 62 agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGy-----------------ga~rlLp~LD~~~i~~a~PK~--~iGySDiTaL 122 (311)
T 1zl0_A 62 AGTVEQRLEDLHNAFDMPDITAVWCLRGGY-----------------GCGQLLPGLDWGRLQAASPRP--LIGFSDISVL 122 (311)
T ss_dssp SSCHHHHHHHHHHHHHSTTEEEEEESCCSS-----------------CGGGGTTTCCHHHHHHSCCCC--EEECGGGHHH
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEccCCc-----------------CHHHHhhccchhhhhccCCCE--EEEEchhHHH
Confidence 334567788899999988888888887653 1235667777666666 8888 9999999999
Q ss_pred HHHHh-hCCcEEecCCc
Q 047540 281 IESLC-AGVPMICWPFL 296 (388)
Q Consensus 281 ~eal~-~GvP~i~~P~~ 296 (388)
+-+++ .|++.+.=|+.
T Consensus 123 ~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 123 LSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHHHTTCCEEECCCG
T ss_pred HHHHHHcCCcEEECHhh
Confidence 98887 48888887764
No 91
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=33.96 E-value=85 Score=28.81 Aligned_cols=74 Identities=14% Similarity=0.202 Sum_probs=57.6
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHHH
Q 047540 204 LTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIES 283 (388)
Q Consensus 204 ~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~ea 283 (388)
.+.+....+.+++.+.....||...+... ..++.++++...+-.+|++ ||-++....++-+
T Consensus 63 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~a 123 (336)
T 3sr3_A 63 SIQERAKELNALIRNPNVSCIMSTIGGMN-----------------SNSLLPYIDYDAFQNNPKI--MIGYSDATALLLG 123 (336)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSC-----------------GGGGGGGSCHHHHHHSCCE--EEECGGGHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcccccc-----------------HHHHhhhcChhHHhhCCeE--EEEechHHHHHHH
Confidence 34577888999999988888988876531 2456777776667678887 9999999889888
Q ss_pred Hh--hCCcEEecCCc
Q 047540 284 LC--AGVPMICWPFL 296 (388)
Q Consensus 284 l~--~GvP~i~~P~~ 296 (388)
++ .|+..+.=|+.
T Consensus 124 l~~~~G~~t~hGp~~ 138 (336)
T 3sr3_A 124 IYAKTGIPTFYGPAL 138 (336)
T ss_dssp HHHHHCCCEEECCCH
T ss_pred HHHhcCceEEECChh
Confidence 87 59998888873
No 92
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=33.38 E-value=34 Score=28.81 Aligned_cols=31 Identities=13% Similarity=0.183 Sum_probs=24.8
Q ss_pred CCcceeeeccCchhHHHHHhhCCcEEecCCcc
Q 047540 266 PAVGGFFTHSGWNSTIESLCAGVPMICWPFLG 297 (388)
Q Consensus 266 ~~~~~~IthgG~~s~~eal~~GvP~i~~P~~~ 297 (388)
..+.++|++||........ ..+|+|-+|..+
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 3444599999998888875 579999999854
No 93
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=33.26 E-value=1.8e+02 Score=26.42 Aligned_cols=108 Identities=15% Similarity=0.030 Sum_probs=57.7
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcce
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNS-NHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGG 270 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~ 270 (388)
.+.+|..|.++ ...+.++.+. +..++.+...+ ++. .++..+...+..+-+..+++..+++.+
T Consensus 7 ~vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~~---------~~~-~~~~~~~~g~~~~~~~~~~l~~~~~D~ 69 (354)
T 3db2_A 7 GVAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSRT---------EDK-REKFGKRYNCAGDATMEALLAREDVEM 69 (354)
T ss_dssp EEEEECCSHHH-------HHHHHHHTTCSSEEEEEEECSS---------HHH-HHHHHHHHTCCCCSSHHHHHHCSSCCE
T ss_pred eEEEEccCHHH-------HHHHHHHHhCCCcEEEEEECCC---------HHH-HHHHHHHcCCCCcCCHHHHhcCCCCCE
Confidence 46667666643 2356677665 45666555432 111 111111111222555677886555444
Q ss_pred eeeccC----chhHHHHHhhCCcEEe-cCCcc--chhHhHHHHhhhhceeEEe
Q 047540 271 FFTHSG----WNSTIESLCAGVPMIC-WPFLG--DQATNCRYTCNEWGVGMDI 316 (388)
Q Consensus 271 ~IthgG----~~s~~eal~~GvP~i~-~P~~~--DQ~~na~~v~~~~G~G~~l 316 (388)
++--.- ..-+.+++.+|+++++ -|+.. ++-.-...++++.|+-+.+
T Consensus 70 V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v 122 (354)
T 3db2_A 70 VIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLC 122 (354)
T ss_dssp EEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEE
T ss_pred EEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 553222 2346788999999888 57654 4444333344666776666
No 94
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=33.08 E-value=20 Score=31.72 Aligned_cols=54 Identities=15% Similarity=0.331 Sum_probs=37.6
Q ss_pred CCCcceeeeccCchhHHHHHhh---CCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCc
Q 047540 265 HPAVGGFFTHSGWNSTIESLCA---GVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGE 341 (388)
Q Consensus 265 ~~~~~~~IthgG~~s~~eal~~---GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~ 341 (388)
.+++ +|+-||-||+++++.. ++|+++++. + .. |.. ..+..+++.+++++++++.
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~-G-----------~~--Gfl-------~~~~~~~~~~al~~i~~g~ 97 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKA-G-----------RL--GFL-------TSYTLDEIDRFLEDLRNWN 97 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEES-S-----------SC--CSS-------CCBCGGGHHHHHHHHHTTC
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEEC-C-----------CC--Ccc-------CcCCHHHHHHHHHHHHcCC
Confidence 3455 9999999999999876 888888873 2 11 222 1245677888888777654
No 95
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=32.34 E-value=50 Score=28.99 Aligned_cols=38 Identities=24% Similarity=0.241 Sum_probs=27.1
Q ss_pred HHHHHHHhhcCCCCccEEEEcCCcc-------hHHHHHHHhCCCeEEE
Q 047540 30 FLDLLQKLKSSSNSVSCIISDGFMP-------FTVTAAQQLGIPIALF 70 (388)
Q Consensus 30 ~~~ll~~l~~~~~~~D~iI~D~~~~-------~~~~~A~~lgIP~v~~ 70 (388)
+-++++.+. ..||+|++|..-. -|..+.-.+++|+|.+
T Consensus 99 ll~al~~L~---~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 143 (246)
T 3ga2_A 99 IIEAAKKLE---TEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGI 143 (246)
T ss_dssp HHHHHHHCS---SCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred HHHHHHhcC---CCCCEEEEcCcEEecCCCcchhheeeeecCCCEEee
Confidence 334444543 3899999998644 3667778889999887
No 96
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=31.30 E-value=25 Score=31.91 Aligned_cols=30 Identities=7% Similarity=0.137 Sum_probs=23.8
Q ss_pred cCCCcceeeeccCchhHHHHHhh----CCcEEecCC
Q 047540 264 NHPAVGGFFTHSGWNSTIESLCA----GVPMICWPF 295 (388)
Q Consensus 264 ~~~~~~~~IthgG~~s~~eal~~----GvP~i~~P~ 295 (388)
..+++ +|+-||-||+++++.. ++|+++++.
T Consensus 74 ~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 74 DGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp --CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 44566 9999999999999754 899998874
No 97
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=31.11 E-value=27 Score=31.28 Aligned_cols=30 Identities=7% Similarity=0.028 Sum_probs=24.3
Q ss_pred cCCCcceeeeccCchhHHHHHhh----CCcEEecCC
Q 047540 264 NHPAVGGFFTHSGWNSTIESLCA----GVPMICWPF 295 (388)
Q Consensus 264 ~~~~~~~~IthgG~~s~~eal~~----GvP~i~~P~ 295 (388)
..+++ +|+-||-||+++++.. ++|++++|.
T Consensus 62 ~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 62 QQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 34566 9999999999999743 789999883
No 98
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=30.32 E-value=3.1e+02 Score=24.89 Aligned_cols=110 Identities=17% Similarity=0.140 Sum_probs=60.8
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCccee
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGF 271 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~ 271 (388)
.+.+|..|.+. .. .++.++...+..++.+...+.. ....+.++.+ ...-|-+..++|..+++.++
T Consensus 28 rvgiiG~G~~~---~~---~~~~~~~~~~~~lvav~d~~~~------~a~~~a~~~~---~~~~~~~~~~ll~~~~vD~V 92 (361)
T 3u3x_A 28 RFAAVGLNHNH---IY---GQVNCLLRAGARLAGFHEKDDA------LAAEFSAVYA---DARRIATAEEILEDENIGLI 92 (361)
T ss_dssp EEEEECCCSTT---HH---HHHHHHHHTTCEEEEEECSCHH------HHHHHHHHSS---SCCEESCHHHHHTCTTCCEE
T ss_pred EEEEECcCHHH---HH---HHHHHhhcCCcEEEEEEcCCHH------HHHHHHHHcC---CCcccCCHHHHhcCCCCCEE
Confidence 57778777643 11 2334444567777766653210 0011222211 12234566789988777667
Q ss_pred eeccCch----hHHHHHhhCCcEEe-cCCcc--chhHhHHHHhhhhceeEEe
Q 047540 272 FTHSGWN----STIESLCAGVPMIC-WPFLG--DQATNCRYTCNEWGVGMDI 316 (388)
Q Consensus 272 IthgG~~----s~~eal~~GvP~i~-~P~~~--DQ~~na~~v~~~~G~G~~l 316 (388)
+--.-.. -+.+++.+|++++| -|+.. ++-.-...++++.|+-+.+
T Consensus 93 ~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v 144 (361)
T 3u3x_A 93 VSAAVSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFSI 144 (361)
T ss_dssp EECCCHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEEE
T ss_pred EEeCChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 6533322 36788999999999 88754 3433333333555665555
No 99
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=30.29 E-value=53 Score=31.65 Aligned_cols=33 Identities=15% Similarity=0.313 Sum_probs=26.0
Q ss_pred HHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEE
Q 047540 30 FLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALF 70 (388)
Q Consensus 30 ~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~ 70 (388)
+++++++. +||++|... .+..+|+++|||.+.+
T Consensus 367 le~~i~~~-----~pDllig~~---~~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 367 LEHAARAG-----QAQLVIGNS---HALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHH-----TCSEEEECT---THHHHHHHTTCCEEEC
T ss_pred HHHHHHhc-----CCCEEEECh---hHHHHHHHcCCCEEEe
Confidence 45555555 899999886 3678999999998875
No 100
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=29.86 E-value=89 Score=22.88 Aligned_cols=42 Identities=19% Similarity=0.154 Sum_probs=26.7
Q ss_pred HHHHHHHhhcCCCCccEEEEcCCcc--hHHHHHHHh-----CCCeEEEccC
Q 047540 30 FLDLLQKLKSSSNSVSCIISDGFMP--FTVTAAQQL-----GIPIALFFTI 73 (388)
Q Consensus 30 ~~~ll~~l~~~~~~~D~iI~D~~~~--~~~~~A~~l-----gIP~v~~~~~ 73 (388)
..+.++.+... +||+||.|...+ -+..+.+.+ .+|++.++..
T Consensus 36 ~~~~~~~~~~~--~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (126)
T 1dbw_A 36 AEAFLAFAPDV--RNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGH 84 (126)
T ss_dssp HHHHHHHGGGC--CSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECT
T ss_pred HHHHHHHHhcC--CCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECC
Confidence 45566666554 899999998654 344444433 5777776543
No 101
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=29.63 E-value=34 Score=30.28 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=24.0
Q ss_pred CCccEEE-EcCCc-chHHHHHHHhCCCeEEEccCc
Q 047540 42 NSVSCII-SDGFM-PFTVTAAQQLGIPIALFFTIA 74 (388)
Q Consensus 42 ~~~D~iI-~D~~~-~~~~~~A~~lgIP~v~~~~~~ 74 (388)
+.||+|| +|+.. .-+..=|..+|||+|.+.-+.
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 4788776 56633 457777999999999985443
No 102
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=29.41 E-value=76 Score=28.07 Aligned_cols=29 Identities=14% Similarity=0.106 Sum_probs=24.4
Q ss_pred CccEEEEcCCcc------hHHHHHHHhCCCeEEEc
Q 047540 43 SVSCIISDGFMP------FTVTAAQQLGIPIALFF 71 (388)
Q Consensus 43 ~~D~iI~D~~~~------~~~~~A~~lgIP~v~~~ 71 (388)
+||+|++-.... .+..+|+.||+|.+...
T Consensus 112 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v 146 (264)
T 1o97_C 112 APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVV 146 (264)
T ss_dssp CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEE
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccce
Confidence 799999987553 68899999999999864
No 103
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=29.22 E-value=1.2e+02 Score=23.11 Aligned_cols=50 Identities=18% Similarity=0.105 Sum_probs=33.3
Q ss_pred hCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCch
Q 047540 286 AGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 286 ~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~ 342 (388)
..+|+|++--..+.... ... -+.|+--.+ .+.++.++|..+|+.++....
T Consensus 74 ~~~pii~ls~~~~~~~~-~~~-~~~g~~~~l-----~kP~~~~~L~~~i~~~~~~~~ 123 (155)
T 1qkk_A 74 PDLPMILVTGHGDIPMA-VQA-IQDGAYDFI-----AKPFAADRLVQSARRAEEKRR 123 (155)
T ss_dssp TTSCEEEEECGGGHHHH-HHH-HHTTCCEEE-----ESSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHH-HHH-HhcCCCeEE-----eCCCCHHHHHHHHHHHHHHHH
Confidence 47888887654443333 333 245775566 467899999999999986543
No 104
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=29.17 E-value=55 Score=29.45 Aligned_cols=81 Identities=11% Similarity=0.054 Sum_probs=45.9
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCccee
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGF 271 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~ 271 (388)
-.|+++--|......+....+...|+..+..+.+..... +....+ . +.+ +....+ .+
T Consensus 11 ~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~---------~~~a~~-~---------~~~--~~~~~d--~v 67 (304)
T 3s40_A 11 VLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE---------QGDATK-Y---------CQE--FASKVD--LI 67 (304)
T ss_dssp EEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS---------TTHHHH-H---------HHH--HTTTCS--EE
T ss_pred EEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC---------cchHHH-H---------HHH--hhcCCC--EE
Confidence 345555444322223456667777777777665554321 111110 0 001 112234 49
Q ss_pred eeccCchhHHHHHh------hCCcEEecCC
Q 047540 272 FTHSGWNSTIESLC------AGVPMICWPF 295 (388)
Q Consensus 272 IthgG~~s~~eal~------~GvP~i~~P~ 295 (388)
|.-||-||+.|++. .++|+.++|.
T Consensus 68 v~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 68 IVFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp EEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EEEccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 99999999999864 5789999997
No 105
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=28.82 E-value=85 Score=23.55 Aligned_cols=41 Identities=15% Similarity=0.245 Sum_probs=25.5
Q ss_pred HHHHHHhhcCCCCccEEEEcCCcc--hHHHHHHHh-------CCCeEEEccC
Q 047540 31 LDLLQKLKSSSNSVSCIISDGFMP--FTVTAAQQL-------GIPIALFFTI 73 (388)
Q Consensus 31 ~~ll~~l~~~~~~~D~iI~D~~~~--~~~~~A~~l-------gIP~v~~~~~ 73 (388)
.+.++.+... +||+||.|...+ -+..+.+.+ .+|++.++..
T Consensus 37 ~~al~~l~~~--~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 37 EECLEALNAT--PPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp HHHHHHHHHS--CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred HHHHHHHhcc--CCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 4445555444 899999998664 355554443 5777776543
No 106
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=28.09 E-value=88 Score=26.12 Aligned_cols=101 Identities=11% Similarity=0.051 Sum_probs=54.8
Q ss_pred hHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhH-HHhhhcCcccccc
Q 047540 178 TECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEF-EVKAKETGFIARW 256 (388)
Q Consensus 178 ~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~ 256 (388)
.++-++|.+.. ...|+.|.. ...+....++..+.+..++=++... +...- ....-.+..+...
T Consensus 23 ~~lg~~La~~g----~~lV~GGg~----~GiM~aa~~gA~~~gG~~iGv~p~~--------l~~~e~~~~~~~~~~~~~~ 86 (191)
T 1t35_A 23 AELGVYMAEQG----IGLVYGGSR----VGLMGTIADAIMENGGTAIGVMPSG--------LFSGEVVHQNLTELIEVNG 86 (191)
T ss_dssp HHHHHHHHHTT----CEEEECCCC----SHHHHHHHHHHHTTTCCEEEEEETT--------CCHHHHTTCCCSEEEEESH
T ss_pred HHHHHHHHHCC----CEEEECCCc----ccHHHHHHHHHHHcCCeEEEEeCch--------hcccccccCCCCccccCCC
Confidence 45566666654 777776652 1345556666666677776665432 11110 0000011122344
Q ss_pred cCh-Hhhh-cCCCcceeeeccCchhHH---HHH------hhCCcEEecCC
Q 047540 257 CPQ-EEVL-NHPAVGGFFTHSGWNSTI---ESL------CAGVPMICWPF 295 (388)
Q Consensus 257 ~pq-~~~L-~~~~~~~~IthgG~~s~~---eal------~~GvP~i~~P~ 295 (388)
.+. ..++ ..++ ..++--||.||+- |++ .+++|++.+-.
T Consensus 87 ~~~Rk~~~~~~sd-a~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 87 MHERKAKMSELAD-GFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp HHHHHHHHHHHCS-EEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred HHHHHHHHHHHCC-EEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 443 3333 3444 4577789999865 556 38899999864
No 107
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=27.67 E-value=2.6e+02 Score=25.33 Aligned_cols=116 Identities=11% Similarity=0.036 Sum_probs=59.0
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcce
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNS-NHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGG 270 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~ 270 (388)
.+-+|..|.++..-...+..+...+... +..++-+...+.. ..+.+.++.+. ..-|-+..++|..+++.+
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~------~a~~~a~~~g~---~~~y~d~~ell~~~~iDa 97 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAG------LAEARAGEFGF---EKATADWRALIADPEVDV 97 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--T------THHHHHHHHTC---SEEESCHHHHHHCTTCCE
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHH------HHHHHHHHhCC---CeecCCHHHHhcCCCCcE
Confidence 5678877776532112222233333333 3456655543210 11223333211 123445678998887766
Q ss_pred eeeccC----chhHHHHHhhCCcEEe-cCCcc--chhHhHHHHhhhhceeEEe
Q 047540 271 FFTHSG----WNSTIESLCAGVPMIC-WPFLG--DQATNCRYTCNEWGVGMDI 316 (388)
Q Consensus 271 ~IthgG----~~s~~eal~~GvP~i~-~P~~~--DQ~~na~~v~~~~G~G~~l 316 (388)
|+---= .--+.+|+.+|++++| -|+.. +|-.-...++++.|.=+.+
T Consensus 98 V~IatP~~~H~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v 150 (393)
T 4fb5_A 98 VSVTTPNQFHAEMAIAALEAGKHVWCEKPMAPAYADAERMLATAERSGKVAAL 150 (393)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEE
T ss_pred EEECCChHHHHHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhHHhcCCcccc
Confidence 653221 1246788999999988 78754 3333333333555665555
No 108
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=27.63 E-value=2.6e+02 Score=23.01 Aligned_cols=142 Identities=11% Similarity=0.089 Sum_probs=72.9
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcce
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGG 270 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~ 270 (388)
++.|-|-+||.+ +....++....|+..+.++-..+-+- ...|+.+.+ |+.... -...++
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~Sa------HR~p~~~~~----------~~~~a~-~~g~~V-- 65 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSA------HRTPEAMFS----------YARGAA-ARGLEV-- 65 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHH----------HHHHHH-HHTCCE--
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECC------CCCHHHHHH----------HHHHHH-hCCCCE--
Confidence 466777778764 45777888888888888765444321 114443221 111100 012344
Q ss_pred eeeccCch----hHHHHHhhCCcEEecCCccch--hHhHH-HHhhh-hceeEEeeecCCCCCCCHHHHHHHHHHHHcCch
Q 047540 271 FFTHSGWN----STIESLCAGVPMICWPFLGDQ--ATNCR-YTCNE-WGVGMDITNSGDDNQVGRNEVEKLVRELMEGEK 342 (388)
Q Consensus 271 ~IthgG~~----s~~eal~~GvP~i~~P~~~DQ--~~na~-~v~~~-~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~ 342 (388)
||.-+|.. ++..++ .-+|+|.+|..... -..+- -+++- -|+.+..- .=+...++.-++..|-. +.|++
T Consensus 66 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV--~I~~~~nAa~lAa~Il~-~~d~~ 141 (174)
T 3lp6_A 66 IIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATV--SIGGAGNAGLLAVRMLG-AANPQ 141 (174)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEEC--CTTCHHHHHHHHHHHHH-TTCHH
T ss_pred EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEE--EcCcchHHHHHHHHHHh-CCCHH
Confidence 88877753 444443 56899999975322 12222 12121 13222220 00223344444433322 35666
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 047540 343 GMQMRNKASEWKRFAEEA 360 (388)
Q Consensus 343 ~~~~~~~a~~l~~~~~~~ 360 (388)
++++.+..++..++.
T Consensus 142 ---l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 142 ---LRARIVAFQDRLADV 156 (174)
T ss_dssp ---HHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHH
Confidence 888888887776643
No 109
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=27.09 E-value=1.2e+02 Score=21.68 Aligned_cols=42 Identities=24% Similarity=0.199 Sum_probs=25.5
Q ss_pred HHHHHHHhhcCCCCccEEEEcCCcc--hHHHHHHHh-----CCCeEEEccC
Q 047540 30 FLDLLQKLKSSSNSVSCIISDGFMP--FTVTAAQQL-----GIPIALFFTI 73 (388)
Q Consensus 30 ~~~ll~~l~~~~~~~D~iI~D~~~~--~~~~~A~~l-----gIP~v~~~~~ 73 (388)
..+.++.+... +||+||.|...+ .+..+.+.+ .+|.+.++..
T Consensus 34 ~~~a~~~~~~~--~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 34 GEEALKKFFSG--NYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp HHHHHHHHHHS--CCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHHHhcC--CCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 34455555444 899999998654 344444333 5777776543
No 110
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=26.87 E-value=78 Score=27.02 Aligned_cols=44 Identities=18% Similarity=0.153 Sum_probs=31.8
Q ss_pred HHHHHHHHHhhcCC--CCccEEEEcCCcchHHHHHHHhCCCeEEEc
Q 047540 28 QPFLDLLQKLKSSS--NSVSCIISDGFMPFTVTAAQQLGIPIALFF 71 (388)
Q Consensus 28 ~~~~~ll~~l~~~~--~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~ 71 (388)
..+++|++...... -.+-+||+|.-...+...|+++|||+..+.
T Consensus 14 snl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~ 59 (211)
T 3p9x_A 14 TNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALD 59 (211)
T ss_dssp HHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECC
T ss_pred hHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeC
Confidence 45677777664321 156789999766667889999999998763
No 111
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=26.61 E-value=79 Score=26.86 Aligned_cols=43 Identities=19% Similarity=0.324 Sum_probs=31.1
Q ss_pred HHHHHHHHHhhcC--CCCccEEEEcCCcchHHHHHHHhCCCeEEE
Q 047540 28 QPFLDLLQKLKSS--SNSVSCIISDGFMPFTVTAAQQLGIPIALF 70 (388)
Q Consensus 28 ~~~~~ll~~l~~~--~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~ 70 (388)
..++.|++.+.+. +-.+-+||++.-...+...|+.+|||+..+
T Consensus 12 s~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~ 56 (209)
T 1meo_A 12 SNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVI 56 (209)
T ss_dssp TTHHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEEC
T ss_pred hHHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEE
Confidence 3456677665432 124567999987778888999999999876
No 112
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=26.44 E-value=98 Score=27.19 Aligned_cols=29 Identities=17% Similarity=0.063 Sum_probs=24.3
Q ss_pred CccEEEEcCCcc------hHHHHHHHhCCCeEEEc
Q 047540 43 SVSCIISDGFMP------FTVTAAQQLGIPIALFF 71 (388)
Q Consensus 43 ~~D~iI~D~~~~------~~~~~A~~lgIP~v~~~ 71 (388)
+||+|++-.... .+..+|+.||+|.+...
T Consensus 116 ~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v 150 (255)
T 1efv_B 116 KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFA 150 (255)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEE
T ss_pred CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccce
Confidence 799999987543 68899999999998864
No 113
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=26.37 E-value=84 Score=23.42 Aligned_cols=45 Identities=11% Similarity=0.042 Sum_probs=27.9
Q ss_pred HHHHHHHHHhhcCCCCccEEEEcCCcc---hHHHHHHH----hCCCeEEEccCc
Q 047540 28 QPFLDLLQKLKSSSNSVSCIISDGFMP---FTVTAAQQ----LGIPIALFFTIA 74 (388)
Q Consensus 28 ~~~~~ll~~l~~~~~~~D~iI~D~~~~---~~~~~A~~----lgIP~v~~~~~~ 74 (388)
....+.++.+... +||+||.|...+ .+..+.+. ..+|++.++...
T Consensus 41 ~~~~~a~~~~~~~--~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 41 DNGEEAVRCAPDL--RPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ 92 (140)
T ss_dssp SSHHHHHHHHHHH--CCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC
T ss_pred CCHHHHHHHHHhC--CCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 3445555555544 899999997553 34444443 378888875443
No 114
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=25.74 E-value=1.5e+02 Score=27.57 Aligned_cols=61 Identities=20% Similarity=0.260 Sum_probs=43.5
Q ss_pred ccChHhhhcCCCcceeee----ccCch--hHHHHHhhCCcEEe-cCCccchhHhHHHHhhhhceeEEe
Q 047540 256 WCPQEEVLNHPAVGGFFT----HSGWN--STIESLCAGVPMIC-WPFLGDQATNCRYTCNEWGVGMDI 316 (388)
Q Consensus 256 ~~pq~~~L~~~~~~~~It----hgG~~--s~~eal~~GvP~i~-~P~~~DQ~~na~~v~~~~G~G~~l 316 (388)
|-+..+++...++.++.| |++.+ -+.++|.+|++++| -|+..|+-.-...++++.|+=.++
T Consensus 57 ~~~~~~l~~~~D~v~i~~p~~~h~~~~~~~a~~al~aGkhVl~EKPl~~~ea~~l~~~A~~~g~~~~v 124 (372)
T 4gmf_A 57 YTSPEQITGMPDIACIVVRSTVAGGAGTQLARHFLARGVHVIQEHPLHPDDISSLQTLAQEQGCCYWI 124 (372)
T ss_dssp ESSGGGCCSCCSEEEECCC--CTTSHHHHHHHHHHHTTCEEEEESCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred ECCHHHHhcCCCEEEEECCCcccchhHHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHcCCEEEE
Confidence 445567888777755543 55543 36788999999999 888777766555666777887777
No 115
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=25.49 E-value=75 Score=27.07 Aligned_cols=44 Identities=16% Similarity=0.223 Sum_probs=31.9
Q ss_pred cHHHHHHHHHhhcCC--CCccEEEEcCCcchHHHHHHHhCCCeEEE
Q 047540 27 LQPFLDLLQKLKSSS--NSVSCIISDGFMPFTVTAAQQLGIPIALF 70 (388)
Q Consensus 27 ~~~~~~ll~~l~~~~--~~~D~iI~D~~~~~~~~~A~~lgIP~v~~ 70 (388)
-..++++++.+.+.. -.+-+||+|.-...+...|+++|||+..+
T Consensus 18 gsnl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~ 63 (209)
T 4ds3_A 18 GSNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVF 63 (209)
T ss_dssp CHHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEEC
T ss_pred cHHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEe
Confidence 355677777765431 14678999865556788999999999886
No 116
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=25.22 E-value=95 Score=26.43 Aligned_cols=43 Identities=12% Similarity=0.271 Sum_probs=30.2
Q ss_pred HHHHHHHHhhcCCC--CccEEEEcCCcchHHHHHHHhCCCeEEEc
Q 047540 29 PFLDLLQKLKSSSN--SVSCIISDGFMPFTVTAAQQLGIPIALFF 71 (388)
Q Consensus 29 ~~~~ll~~l~~~~~--~~D~iI~D~~~~~~~~~A~~lgIP~v~~~ 71 (388)
.+..+++.+.+.+- .+-+||++.-...+...|+.+|||+..+.
T Consensus 14 ~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~ 58 (216)
T 2ywr_A 14 NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQ 58 (216)
T ss_dssp HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeC
Confidence 34566666654422 35678998766678888999999998753
No 117
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=24.51 E-value=1.3e+02 Score=25.19 Aligned_cols=140 Identities=7% Similarity=-0.041 Sum_probs=71.1
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccc-----cChHhhhcCC
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARW-----CPQEEVLNHP 266 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-----~pq~~~L~~~ 266 (388)
.+++.-.|+++... ...+++.|.+.+..+-.+....-. .-+.....+...++++..-| +.+.++...+
T Consensus 10 ~IllgvTGs~aa~k---~~~l~~~L~~~g~~V~vv~T~~A~----~fi~~~~~~~l~~~v~~~~~~~~~~~~hi~l~~~a 82 (194)
T 1p3y_1 10 KLLIGICGSISSVG---ISSYLLYFKSFFKEIRVVMTKTAE----DLIPAHTVSYFCDHVYSEHGENGKRHSHVEIGRWA 82 (194)
T ss_dssp EEEEEECSCGGGGG---THHHHHHHTTTSSEEEEEECHHHH----HHSCHHHHGGGSSEEECTTCSSSCCCCHHHHHHHC
T ss_pred EEEEEEECHHHHHH---HHHHHHHHHHCCCEEEEEEchhHH----HHHHHHHHHHhcCCEeccccccCCCcCcccccccC
Confidence 46666666665432 344556666667665544432110 00111111223334322222 2334444455
Q ss_pred CcceeeeccCchhHHH-------------HHhhCCcEEecCCcc----ch---hHhHHHHhhhhceeEEeeecC------
Q 047540 267 AVGGFFTHSGWNSTIE-------------SLCAGVPMICWPFLG----DQ---ATNCRYTCNEWGVGMDITNSG------ 320 (388)
Q Consensus 267 ~~~~~IthgG~~s~~e-------------al~~GvP~i~~P~~~----DQ---~~na~~v~~~~G~G~~l~~~~------ 320 (388)
++ .+|.-|-+||+.. ++..++|+|+.|-.. .. ..|-..+ .++|+=+.-...+
T Consensus 83 D~-~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L-~~~G~~iv~p~~g~~f~la 160 (194)
T 1p3y_1 83 DI-YCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQL-RKDGHIVIEPVEIMAFEIA 160 (194)
T ss_dssp SE-EEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHH-HHHTCEECCCBCCC-----
T ss_pred CE-EEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHH-HHCCCEEECCCCCcccccc
Confidence 53 5788888776643 256789999999633 22 4467777 5677733321111
Q ss_pred -----C-CCCCCHHHHHHHHHHHHcC
Q 047540 321 -----D-DNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 321 -----~-~~~~~~~~l~~ai~~vl~~ 340 (388)
. .+-.+.++|.+.+.+.+.+
T Consensus 161 cg~~g~~g~~~~~~~iv~~v~~~l~~ 186 (194)
T 1p3y_1 161 TGTRKPNRGLITPDKALLAIEKGFKE 186 (194)
T ss_dssp -------CBCCCHHHHHHHHHHHCC-
T ss_pred cCCcCcCCCCCCHHHHHHHHHHHhcc
Confidence 1 1224677777777777754
No 118
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=24.50 E-value=1.1e+02 Score=27.40 Aligned_cols=48 Identities=17% Similarity=0.279 Sum_probs=37.3
Q ss_pred ccHHHHHHHHHhhcCCCCccEEEEcCCcc--hHHHHHHHhCCCeEEEccCch
Q 047540 26 MLQPFLDLLQKLKSSSNSVSCIISDGFMP--FTVTAAQQLGIPIALFFTIAA 75 (388)
Q Consensus 26 ~~~~~~~ll~~l~~~~~~~D~iI~D~~~~--~~~~~A~~lgIP~v~~~~~~~ 75 (388)
..+.+.++++.+++. ++.+|++++... .+..+|+..|++++.+.+.+.
T Consensus 222 s~~~l~~l~~~ik~~--~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l~~ 271 (291)
T 1pq4_A 222 SAQELKQLIDTAKEN--NLTMVFGETQFSTKSSEAIAAEIGAGVELLDPLAA 271 (291)
T ss_dssp CHHHHHHHHHHHHTT--TCCEEEEETTSCCHHHHHHHHHHTCEEEEECTTCS
T ss_pred CHHHHHHHHHHHHHc--CCCEEEEeCCCChHHHHHHHHHcCCeEEEEcCchh
Confidence 346677888888776 999999998664 467889999999988765543
No 119
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=24.44 E-value=1.1e+02 Score=22.88 Aligned_cols=35 Identities=17% Similarity=0.284 Sum_probs=28.5
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCC
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPD 230 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~ 230 (388)
+.||+-|.| +++.+++|+..+.+.|.+++..+...
T Consensus 2 sqifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 2 SQIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp CEEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ceEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 356676655 78999999999999999999888754
No 120
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=24.34 E-value=83 Score=28.69 Aligned_cols=38 Identities=11% Similarity=0.154 Sum_probs=25.4
Q ss_pred HHHHHHHHHhhcCCCCccEEEEcCCcc-hHHHHHHHhCCCeEEEc
Q 047540 28 QPFLDLLQKLKSSSNSVSCIISDGFMP-FTVTAAQQLGIPIALFF 71 (388)
Q Consensus 28 ~~~~~ll~~l~~~~~~~D~iI~D~~~~-~~~~~A~~lgIP~v~~~ 71 (388)
+.++.++.- +||+||...... -...+.+.+|||++.+.
T Consensus 87 ~n~E~Ilal------~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 87 PDLESLITL------QPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp CCHHHHHHH------CCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred CCHHHHhcC------CCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 455666554 899999876432 12334577899999874
No 121
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=24.24 E-value=90 Score=29.37 Aligned_cols=34 Identities=15% Similarity=0.459 Sum_probs=25.7
Q ss_pred HhhhcCCCcceeeeccCchhHHHHHhh----CC-cEEecCC
Q 047540 260 EEVLNHPAVGGFFTHSGWNSTIESLCA----GV-PMICWPF 295 (388)
Q Consensus 260 ~~~L~~~~~~~~IthgG~~s~~eal~~----Gv-P~i~~P~ 295 (388)
..+-..+++ +|+=||-||++.++.. ++ |+++++.
T Consensus 109 ~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 109 QDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp HHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred hhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 344455676 9999999999999653 57 7888863
No 122
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=24.14 E-value=98 Score=22.27 Aligned_cols=41 Identities=17% Similarity=0.213 Sum_probs=25.0
Q ss_pred HHHHHHhhcCCCCccEEEEcCCcc--hHHHHHHHh-----CCCeEEEccC
Q 047540 31 LDLLQKLKSSSNSVSCIISDGFMP--FTVTAAQQL-----GIPIALFFTI 73 (388)
Q Consensus 31 ~~ll~~l~~~~~~~D~iI~D~~~~--~~~~~A~~l-----gIP~v~~~~~ 73 (388)
.+.++.+... +||+||.|...+ .+..+++.+ .+|.+.++..
T Consensus 37 ~~a~~~~~~~--~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (120)
T 1tmy_A 37 REAVEKYKEL--KPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAM 84 (120)
T ss_dssp HHHHHHHHHH--CCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECT
T ss_pred HHHHHHHHhc--CCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCC
Confidence 4444444443 899999998664 344444433 5777776544
No 123
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=23.95 E-value=1.5e+02 Score=26.87 Aligned_cols=78 Identities=14% Similarity=0.037 Sum_probs=45.6
Q ss_pred cEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceee
Q 047540 193 VVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFF 272 (388)
Q Consensus 193 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~I 272 (388)
.|+++-.+... +....+...|++.+..+.+..... +.... . .+ +..+....++ +|
T Consensus 33 ~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~---------~~~~~-~---------~~-~~~~~~~~d~--vv 87 (332)
T 2bon_A 33 LLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWE---------KGDAA-R---------YV-EEARKFGVAT--VI 87 (332)
T ss_dssp EEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCS---------TTHHH-H---------HH-HHHHHHTCSE--EE
T ss_pred EEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecC---------cchHH-H---------HH-HHHHhcCCCE--EE
Confidence 45555433222 456778888888888876554321 11110 0 00 1111223455 99
Q ss_pred eccCchhHHHHHh--------hCCcEEecCC
Q 047540 273 THSGWNSTIESLC--------AGVPMICWPF 295 (388)
Q Consensus 273 thgG~~s~~eal~--------~GvP~i~~P~ 295 (388)
.-||-||+.|++. .++|+.++|.
T Consensus 88 v~GGDGTl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 88 AGGGDGTINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp EEESHHHHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred EEccchHHHHHHHHHhhcccCCCCeEEEecC
Confidence 9999999998753 5779888997
No 124
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=23.92 E-value=98 Score=27.12 Aligned_cols=29 Identities=24% Similarity=0.094 Sum_probs=23.7
Q ss_pred CccEEEEcCCcc------hHHHHHHHhCCCeEEEc
Q 047540 43 SVSCIISDGFMP------FTVTAAQQLGIPIALFF 71 (388)
Q Consensus 43 ~~D~iI~D~~~~------~~~~~A~~lgIP~v~~~ 71 (388)
+||+|++-.... .+..+|+.||+|.+...
T Consensus 113 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v 147 (252)
T 1efp_B 113 GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFA 147 (252)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccE
Confidence 799999887543 68899999999998764
No 125
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=23.91 E-value=3.9e+02 Score=23.80 Aligned_cols=61 Identities=18% Similarity=0.171 Sum_probs=37.4
Q ss_pred ccChHhhhcCCCcceeeeccCch----hHHHHHhhCCcEEe-cCCcc--chhHhHHHHhhhhceeEEe
Q 047540 256 WCPQEEVLNHPAVGGFFTHSGWN----STIESLCAGVPMIC-WPFLG--DQATNCRYTCNEWGVGMDI 316 (388)
Q Consensus 256 ~~pq~~~L~~~~~~~~IthgG~~----s~~eal~~GvP~i~-~P~~~--DQ~~na~~v~~~~G~G~~l 316 (388)
+-+..++|..+++.+++--.-.. -+.+++.+|+++++ -|+.. ++-.-...++++.|+-+.+
T Consensus 56 ~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v 123 (330)
T 3e9m_A 56 YGSYEELCKDETIDIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLME 123 (330)
T ss_dssp BSSHHHHHHCTTCSEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred eCCHHHHhcCCCCCEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 44566788766555566433333 36788999999988 67654 3433333344666776666
No 126
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=23.57 E-value=73 Score=22.52 Aligned_cols=49 Identities=20% Similarity=0.294 Sum_probs=31.4
Q ss_pred hCCcEEecCCccchhHhH-HHH-hhhhceeEEeeecCCCCCCCHHHHHHHHHHHHc
Q 047540 286 AGVPMICWPFLGDQATNC-RYT-CNEWGVGMDITNSGDDNQVGRNEVEKLVRELME 339 (388)
Q Consensus 286 ~GvP~i~~P~~~DQ~~na-~~v-~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~ 339 (388)
.|+|++++--.+.|.... -.- +++-|+...+ -+.-+++++.+.+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakkegvsydv-----lkstdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDV-----LKSTDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEE-----EECCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhcCcchhh-----hccCCHHHHHHHHHHHHH
Confidence 577777766666665522 111 1334777666 466788999999988874
No 127
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=23.57 E-value=89 Score=26.71 Aligned_cols=44 Identities=16% Similarity=0.288 Sum_probs=31.7
Q ss_pred HHHHHHHHHhhcC-CCCccEEEEcCCcchHHHHHHHhCCCeEEEc
Q 047540 28 QPFLDLLQKLKSS-SNSVSCIISDGFMPFTVTAAQQLGIPIALFF 71 (388)
Q Consensus 28 ~~~~~ll~~l~~~-~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~ 71 (388)
..++++++.+.+. .-.+-+||+|.-...+...|+.+|||+..+.
T Consensus 17 snl~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~ 61 (215)
T 3tqr_A 17 TNLQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQADIPTHIIP 61 (215)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCCEEEeC
Confidence 4566777765431 1156789998766677889999999998863
No 128
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=23.23 E-value=1.1e+02 Score=28.68 Aligned_cols=74 Identities=9% Similarity=0.092 Sum_probs=55.9
Q ss_pred cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcceeeeccCchhHHH
Q 047540 203 YLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGGFFTHSGWNSTIE 282 (388)
Q Consensus 203 ~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~~IthgG~~s~~e 282 (388)
..+.+....+.+++.+.....||..++... ..++.++++...+-.+|++ ||-.+-...++-
T Consensus 92 gtd~~Ra~dL~~af~Dp~i~aI~~~rGGyg-----------------a~rlLp~LD~~~i~~~PK~--fiGySDiTaL~~ 152 (371)
T 3tla_A 92 GTIKERAQEFNELVYNPDITCIMSTIGGDN-----------------SNSLLPFLDYDAIIANPKI--IIGYSDTTALLA 152 (371)
T ss_dssp SCHHHHHHHHHHHHTCTTEEEEEESCCCSC-----------------GGGGGGGSCHHHHHHSCCE--EEECGGGHHHHH
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcccccc-----------------HHHHHhhcChhhHHhCCcE--EEEechHHHHHH
Confidence 345577888999999888888988876531 2356677776667678877 998888888887
Q ss_pred HHh--hCCcEEecCC
Q 047540 283 SLC--AGVPMICWPF 295 (388)
Q Consensus 283 al~--~GvP~i~~P~ 295 (388)
+++ .|++.+-=|.
T Consensus 153 ai~~k~Gl~T~hGP~ 167 (371)
T 3tla_A 153 GIYAKTGLITFYGPA 167 (371)
T ss_dssp HHHHHHCBCEEECCC
T ss_pred HHHHHcCCEEEECcc
Confidence 776 5888887775
No 129
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=22.52 E-value=1.2e+02 Score=22.86 Aligned_cols=41 Identities=10% Similarity=0.144 Sum_probs=25.6
Q ss_pred HHHHHHHhhcCCCCccEEEEcCCcc--hHHHHHHHh-----CCCeEEEcc
Q 047540 30 FLDLLQKLKSSSNSVSCIISDGFMP--FTVTAAQQL-----GIPIALFFT 72 (388)
Q Consensus 30 ~~~ll~~l~~~~~~~D~iI~D~~~~--~~~~~A~~l-----gIP~v~~~~ 72 (388)
..+.++.+... +||+||.|...+ .+..+++.+ .+|++.++.
T Consensus 38 ~~~al~~~~~~--~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~ 85 (141)
T 3cu5_A 38 GINAIQIALKH--PPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSG 85 (141)
T ss_dssp HHHHHHHHTTS--CCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECC
T ss_pred HHHHHHHHhcC--CCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeC
Confidence 35556655544 899999998654 355444433 567776643
No 130
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=22.45 E-value=94 Score=26.42 Aligned_cols=43 Identities=19% Similarity=0.314 Sum_probs=31.3
Q ss_pred HHHHHHHHHhhcC--CCCccEEEEcCCcchHHHHHHHhCCCeEEE
Q 047540 28 QPFLDLLQKLKSS--SNSVSCIISDGFMPFTVTAAQQLGIPIALF 70 (388)
Q Consensus 28 ~~~~~ll~~l~~~--~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~ 70 (388)
..++.+++.+.+. .-.+-+||++.-...+...|+++|||+..+
T Consensus 12 snl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~ 56 (212)
T 1jkx_A 12 SNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTL 56 (212)
T ss_dssp HHHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEe
Confidence 3466777766533 124677999976677888999999998875
No 131
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=22.20 E-value=1.2e+02 Score=21.90 Aligned_cols=41 Identities=22% Similarity=0.215 Sum_probs=24.7
Q ss_pred HHHHHHhhcCCCCccEEEEcCCcc--hHHHHHHHh----CCCeEEEccC
Q 047540 31 LDLLQKLKSSSNSVSCIISDGFMP--FTVTAAQQL----GIPIALFFTI 73 (388)
Q Consensus 31 ~~ll~~l~~~~~~~D~iI~D~~~~--~~~~~A~~l----gIP~v~~~~~ 73 (388)
.+.++.+... +||+||.|...+ -+..+++.+ .+|.+.++..
T Consensus 36 ~~~~~~~~~~--~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 82 (122)
T 1zgz_A 36 AGLREIMQNQ--SVDLILLDINLPDENGLMLTRALRERSTVGIILVTGR 82 (122)
T ss_dssp HHHHHHHHHS--CCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESS
T ss_pred HHHHHHHhcC--CCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECC
Confidence 4444444443 899999998654 355555444 5666665443
No 132
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=22.00 E-value=1.3e+02 Score=22.64 Aligned_cols=64 Identities=6% Similarity=-0.001 Sum_probs=41.8
Q ss_pred cCCCcceeeeccCchh---------HHHHHhhCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHH
Q 047540 264 NHPAVGGFFTHSGWNS---------TIESLCAGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLV 334 (388)
Q Consensus 264 ~~~~~~~~IthgG~~s---------~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai 334 (388)
..+++ +|--+|..| +-.|...|+|+|++=-++.+.. -..+ ++.+.- .+ ..+.+.|.++|
T Consensus 37 ~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~~-P~~l-~~~a~~-iV-------~Wn~~~I~~aI 104 (111)
T 1eiw_A 37 EDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLENV-PPEL-EAVSSE-VV-------GWNPHCIRDAL 104 (111)
T ss_dssp SSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSCC-CTTH-HHHCSE-EE-------CSCHHHHHHHH
T ss_pred ccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCcC-CHHH-HhhCce-ec-------cCCHHHHHHHH
Confidence 34565 888889876 5677889999998766554411 1123 332332 22 37889999999
Q ss_pred HHHHc
Q 047540 335 RELME 339 (388)
Q Consensus 335 ~~vl~ 339 (388)
+..++
T Consensus 105 ~~~~~ 109 (111)
T 1eiw_A 105 EDALD 109 (111)
T ss_dssp HHHHC
T ss_pred HhccC
Confidence 88753
No 133
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=21.84 E-value=1.1e+02 Score=22.96 Aligned_cols=41 Identities=17% Similarity=0.165 Sum_probs=25.6
Q ss_pred HHHHHHhhcCCCCccEEEEcCCcc--hHHHHHHHh----CCCeEEEccC
Q 047540 31 LDLLQKLKSSSNSVSCIISDGFMP--FTVTAAQQL----GIPIALFFTI 73 (388)
Q Consensus 31 ~~ll~~l~~~~~~~D~iI~D~~~~--~~~~~A~~l----gIP~v~~~~~ 73 (388)
.+.++.+... +||+||.|...+ -+..+++.+ .+|++.++..
T Consensus 38 ~~al~~~~~~--~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~ 84 (136)
T 2qzj_A 38 EEAIGKIFSN--KYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYI 84 (136)
T ss_dssp HHHHHHHHHC--CCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESC
T ss_pred HHHHHHHHhc--CCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcC
Confidence 4455555444 899999998654 355555444 5777776543
No 134
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=21.75 E-value=4.2e+02 Score=23.48 Aligned_cols=61 Identities=16% Similarity=0.141 Sum_probs=37.4
Q ss_pred ccChHhhhcCCCcceeeeccCc----hhHHHHHhhCCcEEe-cCCcc--chhHhHHHHhhhhceeEEe
Q 047540 256 WCPQEEVLNHPAVGGFFTHSGW----NSTIESLCAGVPMIC-WPFLG--DQATNCRYTCNEWGVGMDI 316 (388)
Q Consensus 256 ~~pq~~~L~~~~~~~~IthgG~----~s~~eal~~GvP~i~-~P~~~--DQ~~na~~v~~~~G~G~~l 316 (388)
+-+..++|..+++.+++--.-. --+.+++.+|++++| -|+.. ++-.-...++++.|+-+.+
T Consensus 56 ~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v 123 (329)
T 3evn_A 56 YDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLME 123 (329)
T ss_dssp ESCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 4456778886665556643332 236788999999988 68754 3443333333566765555
No 135
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=21.70 E-value=1.6e+02 Score=21.03 Aligned_cols=42 Identities=14% Similarity=0.092 Sum_probs=25.4
Q ss_pred HHHHHHhhcCCCCccEEEEcCCcc--hHHHHHHHh-----CCCeEEEccCc
Q 047540 31 LDLLQKLKSSSNSVSCIISDGFMP--FTVTAAQQL-----GIPIALFFTIA 74 (388)
Q Consensus 31 ~~ll~~l~~~~~~~D~iI~D~~~~--~~~~~A~~l-----gIP~v~~~~~~ 74 (388)
.+.++.+... +||+||.|...+ -+..+.+.+ .+|++.++...
T Consensus 34 ~~a~~~~~~~--~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 82 (121)
T 2pl1_A 34 KEADYYLNEH--IPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARE 82 (121)
T ss_dssp HHHHHHHHHS--CCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCC
T ss_pred HHHHHHHhcc--CCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCC
Confidence 4455555444 899999998654 344444332 57777765443
No 136
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=21.65 E-value=1.9e+02 Score=28.57 Aligned_cols=28 Identities=14% Similarity=0.268 Sum_probs=23.1
Q ss_pred CcceeeeccC------chhHHHHHhhCCcEEecC
Q 047540 267 AVGGFFTHSG------WNSTIESLCAGVPMICWP 294 (388)
Q Consensus 267 ~~~~~IthgG------~~s~~eal~~GvP~i~~P 294 (388)
+.+++++|+| .+.+.+|.+.++|+|++-
T Consensus 68 k~~v~~~tsGpG~~N~~~gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 68 NLGVTVGSGGPGASHLINGLYDAAMDNIPVVAIL 101 (590)
T ss_dssp CCCEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CCEEEEeCcChHHHHHHHHHHHHHhcCCCEEEEc
Confidence 3455999998 567899999999999973
No 137
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=21.49 E-value=1.1e+02 Score=26.03 Aligned_cols=42 Identities=17% Similarity=0.271 Sum_probs=28.9
Q ss_pred HHHHHHHHhhcC--CCCccEEEEcCCcchHHHHHHHhCCCeEEE
Q 047540 29 PFLDLLQKLKSS--SNSVSCIISDGFMPFTVTAAQQLGIPIALF 70 (388)
Q Consensus 29 ~~~~ll~~l~~~--~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~ 70 (388)
.+..+++.+.+. +-.+-+||++.-...+...|+.+|||+..+
T Consensus 16 ~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~ 59 (212)
T 3av3_A 16 NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVF 59 (212)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEe
Confidence 345666665433 124567899865566778899999998875
No 138
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=21.42 E-value=1.3e+02 Score=21.64 Aligned_cols=41 Identities=17% Similarity=0.250 Sum_probs=24.7
Q ss_pred HHHHHHhhcCCCCccEEEEcCCcc--hHHHHHHHh----CCCeEEEccC
Q 047540 31 LDLLQKLKSSSNSVSCIISDGFMP--FTVTAAQQL----GIPIALFFTI 73 (388)
Q Consensus 31 ~~ll~~l~~~~~~~D~iI~D~~~~--~~~~~A~~l----gIP~v~~~~~ 73 (388)
.+.++.+... +||+||.|...+ -+..+++.+ .+|.+.++..
T Consensus 37 ~~a~~~~~~~--~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 83 (123)
T 1xhf_A 37 AEMHQILSEY--DINLVIMDINLPGKNGLLLARELREQANVALMFLTGR 83 (123)
T ss_dssp HHHHHHHHHS--CCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESC
T ss_pred HHHHHHHhcC--CCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECC
Confidence 4445544444 899999998654 344444433 5776666443
No 139
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=21.37 E-value=79 Score=28.65 Aligned_cols=30 Identities=13% Similarity=0.110 Sum_probs=20.2
Q ss_pred CccEEEEcCCcchHHHHHHHhCCCeEEEcc
Q 047540 43 SVSCIISDGFMPFTVTAAQQLGIPIALFFT 72 (388)
Q Consensus 43 ~~D~iI~D~~~~~~~~~A~~lgIP~v~~~~ 72 (388)
+||+||......-...--++.|||++.+..
T Consensus 116 ~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 116 TPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp CCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred CCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 999999876422222333567999998853
No 140
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=21.34 E-value=1.3e+02 Score=27.36 Aligned_cols=27 Identities=11% Similarity=0.049 Sum_probs=22.3
Q ss_pred ceeeeccCchhHHHHHh------hCCcEEecCC
Q 047540 269 GGFFTHSGWNSTIESLC------AGVPMICWPF 295 (388)
Q Consensus 269 ~~~IthgG~~s~~eal~------~GvP~i~~P~ 295 (388)
.++|.-||-||+.|++. .++|+.++|.
T Consensus 82 d~vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 82 DVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp SEEEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred CEEEEEcCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 34999999999998853 4689999997
No 141
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=21.31 E-value=2.9e+02 Score=22.62 Aligned_cols=85 Identities=16% Similarity=0.197 Sum_probs=49.9
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcce
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGG 270 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~ 270 (388)
.|.|-|-+||.+ +....++....|+..+.++-..+-+- ...|+.+.+ |+.. ...-.+++
T Consensus 12 ~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa------HR~p~~l~~----------~~~~---a~~~g~~V 70 (173)
T 4grd_A 12 APLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA------HRMPDEMFD----------YAEK---ARERGLRA 70 (173)
T ss_dssp SCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHH----------HHHH---HTTTTCSE
T ss_pred CCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc------ccCHHHHHH----------HHHH---HHhcCCeE
Confidence 578888888865 45677788888888888765444321 114443221 1111 11123344
Q ss_pred eeeccCc----hhHHHHHhhCCcEEecCCcc
Q 047540 271 FFTHSGW----NSTIESLCAGVPMICWPFLG 297 (388)
Q Consensus 271 ~IthgG~----~s~~eal~~GvP~i~~P~~~ 297 (388)
||.-.|. .++..+ ..-+|+|.+|...
T Consensus 71 iIa~AG~aahLpgvvA~-~t~~PVIgVPv~~ 100 (173)
T 4grd_A 71 IIAGAGGAAHLPGMLAA-KTTVPVLGVPVAS 100 (173)
T ss_dssp EEEEEESSCCHHHHHHH-HCCSCEEEEEECC
T ss_pred EEEeccccccchhhhee-cCCCCEEEEEcCC
Confidence 7776664 244444 4579999999744
No 142
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=21.27 E-value=80 Score=30.74 Aligned_cols=34 Identities=21% Similarity=0.255 Sum_probs=25.8
Q ss_pred HHHHHHHHhhcCCCCccEEEEcCCcchHHHHHHHhCCCeEEE
Q 047540 29 PFLDLLQKLKSSSNSVSCIISDGFMPFTVTAAQQLGIPIALF 70 (388)
Q Consensus 29 ~~~~ll~~l~~~~~~~D~iI~D~~~~~~~~~A~~lgIP~v~~ 70 (388)
.+++++++. +||++|... ....+|+++|||++.+
T Consensus 408 el~~~i~~~-----~pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 408 EFEEFVKRI-----KPDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp HHHHHHHHH-----CCSEEEECH---HHHHHHHHTTCCEEES
T ss_pred HHHHHHHhc-----CCcEEEeCc---chhHHHHHcCCCEEec
Confidence 344555554 899999864 5678999999999864
No 143
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=21.16 E-value=1.4e+02 Score=21.38 Aligned_cols=47 Identities=9% Similarity=-0.021 Sum_probs=32.1
Q ss_pred hCCcEEecCCccchhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcC
Q 047540 286 AGVPMICWPFLGDQATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEG 340 (388)
Q Consensus 286 ~GvP~i~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~ 340 (388)
..+|+|++ -.. ........ .+.|+--.+ .+.++.+++...|++++..
T Consensus 79 ~~~~ii~~-~~~-~~~~~~~~-~~~g~~~~l-----~kp~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 79 KNVPIVII-GNP-DGFAQHRK-LKAHADEYV-----AKPVDADQLVERAGALIGF 125 (127)
T ss_dssp TTSCEEEE-ECG-GGHHHHHH-STTCCSEEE-----ESSCCHHHHHHHHHHHHCC
T ss_pred cCCCEEEE-ecC-CchhHHHH-HHhCcchhe-----eCCCCHHHHHHHHHHHHcC
Confidence 57899988 333 33344444 346775556 4678999999999998764
No 144
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=21.14 E-value=1.5e+02 Score=24.68 Aligned_cols=102 Identities=9% Similarity=-0.030 Sum_probs=50.6
Q ss_pred hHHHHHhcCCCCCCCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCccccccc
Q 047540 178 TECLQWLDSKELPNSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWC 257 (388)
Q Consensus 178 ~~l~~~l~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 257 (388)
.++-++|.+.. ..+|+.|.. ...+....++..+.+..++=++...... .+.+... -+...++++.
T Consensus 34 ~~lg~~la~~g----~~lv~GGG~----~GlM~a~~~ga~~~GG~viGv~p~~l~~---~e~~~~~----~~~~i~~~~~ 98 (189)
T 3sbx_A 34 GAVGAAIAARG----WTLVWGGGH----VSAMGAVSSAARAHGGWTVGVIPKMLVH---RELADHD----ADELVVTETM 98 (189)
T ss_dssp HHHHHHHHHTT----CEEEECCBC----SHHHHHHHHHHHTTTCCEEEEEETTTTT---TTTBCTT----CSEEEEESSH
T ss_pred HHHHHHHHHCC----CEEEECCCc----cCHHHHHHHHHHHcCCcEEEEcCchhhh---cccCCCC----CCeeEEcCCH
Confidence 34556665554 555655432 1345556666666666666554322100 0011100 0111223333
Q ss_pred Ch-Hh-hhcCCCcceeeeccCchhHHHHH---------hhCCcEEecCC
Q 047540 258 PQ-EE-VLNHPAVGGFFTHSGWNSTIESL---------CAGVPMICWPF 295 (388)
Q Consensus 258 pq-~~-~L~~~~~~~~IthgG~~s~~eal---------~~GvP~i~~P~ 295 (388)
.. .. ++.+++. .++--||.||+-|.. .+++|++.+-.
T Consensus 99 ~~Rk~~m~~~sda-~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~ 146 (189)
T 3sbx_A 99 WERKQVMEDRANA-FITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDP 146 (189)
T ss_dssp HHHHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred HHHHHHHHHHCCE-EEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecC
Confidence 32 23 4445554 466778899987764 36899998853
No 145
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=21.05 E-value=3e+02 Score=22.37 Aligned_cols=141 Identities=13% Similarity=0.090 Sum_probs=72.6
Q ss_pred CCcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCCCcce
Q 047540 191 NSVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHPAVGG 270 (388)
Q Consensus 191 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~~~~~ 270 (388)
++.|-|-+||.+ +....++....|+..+.++-..+-+- ...|+.+.+-.. -...-.+++
T Consensus 3 ~~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa------HR~p~~~~~~~~-------------~a~~~g~~V 61 (163)
T 3ors_A 3 AMKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSA------HRTPKMMVQFAS-------------EARERGINI 61 (163)
T ss_dssp CCCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHHHH-------------HTTTTTCCE
T ss_pred CCeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECC------cCCHHHHHHHHH-------------HHHhCCCcE
Confidence 456777777754 45777888888888888765444321 114443221100 011112334
Q ss_pred eeeccCch----hHHHHHhhCCcEEecCCccchh--HhHH-HHhhhhceeE--EeeecCCC--CCCCHHHHHHHHHHHHc
Q 047540 271 FFTHSGWN----STIESLCAGVPMICWPFLGDQA--TNCR-YTCNEWGVGM--DITNSGDD--NQVGRNEVEKLVRELME 339 (388)
Q Consensus 271 ~IthgG~~----s~~eal~~GvP~i~~P~~~DQ~--~na~-~v~~~~G~G~--~l~~~~~~--~~~~~~~l~~ai~~vl~ 339 (388)
||.=+|.. ++..++ .-+|+|.+|...... ..+- -+++ .--|+ ..- .=+ ...++.-+...|-. +.
T Consensus 62 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vq-mp~GvPVatV--~I~~a~~~nAa~lAa~Il~-~~ 136 (163)
T 3ors_A 62 IIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQ-MPGGIPVATT--AIGAAGAKNAGILAARMLS-IQ 136 (163)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTSCCEEC--CSTHHHHHHHHHHHHHHHH-TT
T ss_pred EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhh-CCCCCceEEE--EcCCcccHHHHHHHHHHHh-CC
Confidence 88877753 444443 568999999754321 2221 2212 33333 210 001 12333334433322 35
Q ss_pred CchHHHHHHHHHHHHHHHHHH
Q 047540 340 GEKGMQMRNKASEWKRFAEEA 360 (388)
Q Consensus 340 ~~~~~~~~~~a~~l~~~~~~~ 360 (388)
|++ ++++.+.+++..++.
T Consensus 137 d~~---l~~kl~~~r~~~~~~ 154 (163)
T 3ors_A 137 NPS---LVEKLNQYESSLIQK 154 (163)
T ss_dssp CTH---HHHHHHHHHHHHHHH
T ss_pred CHH---HHHHHHHHHHHHHHH
Confidence 676 888888888777643
No 146
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=21.01 E-value=91 Score=26.64 Aligned_cols=45 Identities=22% Similarity=0.282 Sum_probs=32.1
Q ss_pred cHHHHHHHHHhhcCC--CCccEEEEcCCcchHHHHHHHhCCCeEEEc
Q 047540 27 LQPFLDLLQKLKSSS--NSVSCIISDGFMPFTVTAAQQLGIPIALFF 71 (388)
Q Consensus 27 ~~~~~~ll~~l~~~~--~~~D~iI~D~~~~~~~~~A~~lgIP~v~~~ 71 (388)
-..++++++.+.+.. -.+-+||+|.-...+...|+++|||+..+.
T Consensus 19 gsnl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~ 65 (215)
T 3kcq_A 19 GSNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVK 65 (215)
T ss_dssp CHHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECC
T ss_pred cHHHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeC
Confidence 355677888775331 146788998655567788999999998763
No 147
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=20.98 E-value=1.1e+02 Score=27.20 Aligned_cols=45 Identities=11% Similarity=0.187 Sum_probs=34.9
Q ss_pred cHHHHHHHHHhhcCCCCccEEEEcCCcc--hHHHHHHHhCCCeEEEccC
Q 047540 27 LQPFLDLLQKLKSSSNSVSCIISDGFMP--FTVTAAQQLGIPIALFFTI 73 (388)
Q Consensus 27 ~~~~~~ll~~l~~~~~~~D~iI~D~~~~--~~~~~A~~lgIP~v~~~~~ 73 (388)
.+.+.++++.+++. ++.+|++++.+. .+..+|+..|++++.+.+.
T Consensus 214 ~~~l~~l~~~ik~~--~v~~if~e~~~~~~~~~~la~~~g~~v~~l~pl 260 (286)
T 3gi1_A 214 PRQLKEIQDFVKEY--NVKTIFAEDNVNPKIAHAIAKSTGAKVKTLSPL 260 (286)
T ss_dssp HHHHHHHHHHHHHT--TCCEEEECTTSCTHHHHHHHHTTTCEEEECCCS
T ss_pred HHHHHHHHHHHHHc--CCCEEEEeCCCChHHHHHHHHHhCCeEEEeccc
Confidence 45677788877776 999999999654 4668899999999876543
No 148
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=20.86 E-value=1.6e+02 Score=23.88 Aligned_cols=138 Identities=10% Similarity=0.061 Sum_probs=69.3
Q ss_pred CcEEEeeCCCccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCchhHHHhhhcCcccccccChHhhhcCC-Ccce
Q 047540 192 SVVYVNFGSSVYLTKQQLTEVAMGLVNSNHPFLWIIRPDLVTGETADMPSEFEVKAKETGFIARWCPQEEVLNHP-AVGG 270 (388)
Q Consensus 192 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~~L~~~-~~~~ 270 (388)
+.|-|-+||.+ +....++....|+..+.++-..+-+- ...|+.+.+ |+.+. .+. ..++
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~sa------HR~p~~~~~----------~~~~a---~~~~~~~V 61 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSA------HKTAEHVVS----------MLKEY---EALDRPKL 61 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHHH----------HHHHH---HTSCSCEE
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHHH----------HHHHh---hhcCCCcE
Confidence 45666677754 45677788888888887765444321 114443221 11111 111 2445
Q ss_pred eeeccCch----hHHHHHhhCCcEEecCCccc---hhHhHHHHhhhhceeEEeeecCCCCCCCHHHHHHHHHHHHcCchH
Q 047540 271 FFTHSGWN----STIESLCAGVPMICWPFLGD---QATNCRYTCNEWGVGMDITNSGDDNQVGRNEVEKLVRELMEGEKG 343 (388)
Q Consensus 271 ~IthgG~~----s~~eal~~GvP~i~~P~~~D---Q~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~vl~~~~~ 343 (388)
||.=+|.. ++..++ .-+|+|.+|.... -.+ ---+++ .--|+-+.+- +...++.-++..|-. +.|++
T Consensus 62 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~d-LlS~vq-mp~GvpVatv--~~~~nAa~lA~~Il~-~~d~~- 134 (159)
T 3rg8_A 62 YITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGAD-IYSSLR-MPSGISPALV--LEPKNAALLAARIFS-LYDKE- 134 (159)
T ss_dssp EEEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTH-HHHHHC-CCTTCCCEEC--CSHHHHHHHHHHHHT-TTCHH-
T ss_pred EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCcc-HHHHHh-CCCCCceEEe--cCchHHHHHHHHHHh-CCCHH-
Confidence 88888853 444443 5689999996432 222 222212 3223333111 222333334333322 34665
Q ss_pred HHHHHHHHHHHHHHHH
Q 047540 344 MQMRNKASEWKRFAEE 359 (388)
Q Consensus 344 ~~~~~~a~~l~~~~~~ 359 (388)
++++.+..++..++
T Consensus 135 --l~~kl~~~r~~~~~ 148 (159)
T 3rg8_A 135 --IADSVKSYMESNAQ 148 (159)
T ss_dssp --HHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHH
Confidence 77777777766553
No 149
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=20.74 E-value=1.3e+02 Score=29.45 Aligned_cols=27 Identities=22% Similarity=0.165 Sum_probs=22.4
Q ss_pred cceeeeccCch------hHHHHHhhCCcEEecC
Q 047540 268 VGGFFTHSGWN------STIESLCAGVPMICWP 294 (388)
Q Consensus 268 ~~~~IthgG~~------s~~eal~~GvP~i~~P 294 (388)
.+++++|.|-| .++||.+.++|+|++-
T Consensus 72 pgv~~~TsGpG~~N~~~gia~A~~d~vPll~it 104 (556)
T 3hww_A 72 PVAVIVTSGTAVANLYPALIEAGLTGEKLILLT 104 (556)
T ss_dssp CEEEEECSSHHHHTTHHHHHHHHHHCCCEEEEE
T ss_pred CEEEEECCCcHHHhhhHHHHHHHHhCCCeEEEe
Confidence 44599999955 6899999999999974
No 150
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=20.71 E-value=1.1e+02 Score=22.83 Aligned_cols=40 Identities=8% Similarity=0.029 Sum_probs=26.5
Q ss_pred HHHHHHHhhc-CCCCccEEEEcCCcc--hHHHHHHHh-----CCCeEEEc
Q 047540 30 FLDLLQKLKS-SSNSVSCIISDGFMP--FTVTAAQQL-----GIPIALFF 71 (388)
Q Consensus 30 ~~~ll~~l~~-~~~~~D~iI~D~~~~--~~~~~A~~l-----gIP~v~~~ 71 (388)
..+.++.+.. . .||+||.|...+ .+..+.+.+ .+|++.++
T Consensus 48 ~~~al~~l~~~~--~~dlvilD~~l~~~~g~~~~~~l~~~~~~~~ii~ls 95 (138)
T 2b4a_A 48 GSAFFQHRSQLS--TCDLLIVSDQLVDLSIFSLLDIVKEQTKQPSVLILT 95 (138)
T ss_dssp HHHHHHTGGGGG--SCSEEEEETTCTTSCHHHHHHHHTTSSSCCEEEEEE
T ss_pred HHHHHHHHHhCC--CCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEE
Confidence 4566666655 4 899999998654 355555554 46776664
No 151
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=20.64 E-value=90 Score=26.79 Aligned_cols=29 Identities=7% Similarity=0.102 Sum_probs=20.4
Q ss_pred CccEEEEcCCcch--HHHHHHHhCCCeEEEc
Q 047540 43 SVSCIISDGFMPF--TVTAAQQLGIPIALFF 71 (388)
Q Consensus 43 ~~D~iI~D~~~~~--~~~~A~~lgIP~v~~~ 71 (388)
+||+||....... ...--++.|||++.+.
T Consensus 59 ~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 59 KPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 9999999875431 2333456799999874
No 152
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=20.06 E-value=4.7e+02 Score=23.33 Aligned_cols=61 Identities=16% Similarity=0.139 Sum_probs=37.5
Q ss_pred ccChHhhhcCCCcceeeeccCch----hHHHHHhhCCcEEe-cCCcc--chhHhHHHHhhhhceeEEe
Q 047540 256 WCPQEEVLNHPAVGGFFTHSGWN----STIESLCAGVPMIC-WPFLG--DQATNCRYTCNEWGVGMDI 316 (388)
Q Consensus 256 ~~pq~~~L~~~~~~~~IthgG~~----s~~eal~~GvP~i~-~P~~~--DQ~~na~~v~~~~G~G~~l 316 (388)
+-+..++|..+++.+++--.-.. -+.+++.+|+++++ -|+.. ++-.-...++++.|+-+.+
T Consensus 53 ~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v 120 (344)
T 3ezy_A 53 YKDPHELIEDPNVDAVLVCSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFT 120 (344)
T ss_dssp ESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEE
T ss_pred eCCHHHHhcCCCCCEEEEcCCCcchHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEE
Confidence 44556788865555566544333 36788999999988 58654 3333333333666776666
Done!