BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047544
(95 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359476949|ref|XP_002282659.2| PREDICTED: carbamoyl-phosphate synthase small chain [Vitis
vinifera]
gi|296088611|emb|CBI37602.3| unnamed protein product [Vitis vinifera]
Length = 426
Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/95 (80%), Positives = 87/95 (91%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N+++GRVEISAQNHNYAVDPA+LP+GVEVTH+NLNDG+CAGLAYPALN
Sbjct: 332 KFGHHGGNHPVRNLRSGRVEISAQNHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPALN 391
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
+MSLQYH EASPGP DSD FR+F++LMK VK A
Sbjct: 392 IMSLQYHPEASPGPHDSDPAFREFIQLMKQVKQNA 426
>gi|262181537|gb|ACY29659.1| anthranilate synthase 02 [Vitis vinifera]
Length = 426
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/95 (80%), Positives = 87/95 (91%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N+++GRVEISAQNHNYAVDPA+LP+GVEVTH+NLNDG+CAGLAYPALN
Sbjct: 332 KFGHHGGNHPVRNLRSGRVEISAQNHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPALN 391
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
+MSLQYH EASPGP DSD FR+F++LMK VK A
Sbjct: 392 IMSLQYHPEASPGPHDSDPAFREFIQLMKQVKQNA 426
>gi|224137896|ref|XP_002326467.1| predicted protein [Populus trichocarpa]
gi|222833789|gb|EEE72266.1| predicted protein [Populus trichocarpa]
Length = 390
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/95 (82%), Positives = 85/95 (89%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N+ RVEISAQNHNYAVDPA+LPKGVEVTHINLNDG+CAGLA+PALN
Sbjct: 296 KFGHHGGNHPVRNLVANRVEISAQNHNYAVDPASLPKGVEVTHINLNDGSCAGLAFPALN 355
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
VMSLQYH EASPGP DSD VF +F+ELMK VK +A
Sbjct: 356 VMSLQYHPEASPGPHDSDSVFGEFIELMKKVKQKA 390
>gi|224074207|ref|XP_002304301.1| predicted protein [Populus trichocarpa]
gi|222841733|gb|EEE79280.1| predicted protein [Populus trichocarpa]
Length = 428
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/95 (81%), Positives = 85/95 (89%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N+ RVEISAQNHNYAVDPA+LP+GVEVTHINLNDG+CAGLA+PALN
Sbjct: 334 KFGHHGGNHPVRNLLANRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPALN 393
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
VMSLQYH EASPGP DSD VF +F+ELMK VK +A
Sbjct: 394 VMSLQYHPEASPGPHDSDSVFGEFMELMKKVKQKA 428
>gi|297818374|ref|XP_002877070.1| hypothetical protein ARALYDRAFT_484564 [Arabidopsis lyrata subsp.
lyrata]
gi|297322908|gb|EFH53329.1| hypothetical protein ARALYDRAFT_484564 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats.
Identities = 72/92 (78%), Positives = 82/92 (89%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N + G+VEISAQNHNYAVDPA+LP GVEVTH+NLNDG+CAGL++PA+N
Sbjct: 336 KFGHHGGNHPVRNNRTGQVEISAQNHNYAVDPASLPGGVEVTHVNLNDGSCAGLSFPAMN 395
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
VMSLQYH EASPGP DSD FR+F+ELMK K
Sbjct: 396 VMSLQYHPEASPGPHDSDNAFREFIELMKRSK 427
>gi|449435154|ref|XP_004135360.1| PREDICTED: carbamoyl-phosphate synthase small chain-like [Cucumis
sativus]
gi|449524226|ref|XP_004169124.1| PREDICTED: carbamoyl-phosphate synthase small chain-like [Cucumis
sativus]
Length = 432
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 72/95 (75%), Positives = 81/95 (85%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N +N RVEISAQNHNYAVDPA+LP+GVEVTHINLNDG+CAGL++P L
Sbjct: 338 KFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLSFPKLK 397
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
+MSLQYH EASPGP DSD VF DF+ +MK K A
Sbjct: 398 IMSLQYHPEASPGPHDSDSVFGDFIAMMKQEKRNA 432
>gi|18405507|ref|NP_566824.1| carbamoyl phosphate synthetase A [Arabidopsis thaliana]
gi|9294479|dbj|BAB02698.1| carbamoyl-phosphate synthetase small subunit [Arabidopsis thaliana]
gi|15028109|gb|AAK76678.1| putative carbamoyl phosphate synthetase small subunit [Arabidopsis
thaliana]
gi|19310631|gb|AAL85046.1| putative carbamoyl phosphate synthetase small subunit [Arabidopsis
thaliana]
gi|332643837|gb|AEE77358.1| carbamoyl phosphate synthetase A [Arabidopsis thaliana]
Length = 430
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 71/92 (77%), Positives = 81/92 (88%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N + G+VEISAQNHNYAVDPA+LP GVEVTH+NLNDG+CAGL++P +N
Sbjct: 336 KFGHHGGNHPVRNNRTGQVEISAQNHNYAVDPASLPGGVEVTHVNLNDGSCAGLSFPEMN 395
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
VMSLQYH EASPGP DSD FR+F+ELMK K
Sbjct: 396 VMSLQYHPEASPGPHDSDNAFREFIELMKRSK 427
>gi|2462781|gb|AAC25961.1| carbamoyl phosphate synthetase small subunit [Arabidopsis thaliana]
Length = 428
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 71/92 (77%), Positives = 81/92 (88%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N + G+VEISAQNHNYAVDPA+LP GVEVTH+NLNDG+CAGL++P +N
Sbjct: 334 KFGHHGGNHPVRNNRTGQVEISAQNHNYAVDPASLPGGVEVTHVNLNDGSCAGLSFPEMN 393
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
VMSLQYH EASPGP DSD FR+F+ELMK K
Sbjct: 394 VMSLQYHPEASPGPHDSDNAFREFIELMKRSK 425
>gi|356512801|ref|XP_003525104.1| PREDICTED: carbamoyl-phosphate synthase small chain-like [Glycine
max]
Length = 429
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 73/94 (77%), Positives = 81/94 (86%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N++ G+VEISAQNHNYAVDPATLP+GVEVTH NLNDG+CAGLA+PA
Sbjct: 322 KFGHHGGNHPVRNLRTGQVEISAQNHNYAVDPATLPEGVEVTHRNLNDGSCAGLAFPAQR 381
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
+MSLQYH EASPGP DSD FRDFVELM K +
Sbjct: 382 IMSLQYHPEASPGPHDSDYAFRDFVELMMQEKNK 415
>gi|356516335|ref|XP_003526851.1| PREDICTED: carbamoyl-phosphate synthase small chain-like [Glycine
max]
Length = 438
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 74/95 (77%), Positives = 84/95 (88%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N+++G VEISAQNHNYAVDPATLP+GVEVTHINLNDG+CAGLA+PA
Sbjct: 329 KFGHHGGNHPVRNLRSGHVEISAQNHNYAVDPATLPEGVEVTHINLNDGSCAGLAFPAQQ 388
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
+MSLQYH EASPGP DSD +FR+F+ELMK K R
Sbjct: 389 LMSLQYHPEASPGPHDSDYIFREFIELMKQGKNRT 423
>gi|222154054|gb|ACM47217.1| plastid carbamoylphosphate synthetase small subunit 2 [Medicago
truncatula]
Length = 431
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 73/94 (77%), Positives = 82/94 (87%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N++ GRVEIS+QNHNYAVDPATLPKGVEVTHINLND +CAGLA+PA
Sbjct: 326 KFGHHGGNHPVRNLRTGRVEISSQNHNYAVDPATLPKGVEVTHINLNDSSCAGLAFPARK 385
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
V+SLQYH EASPGP DSD F++FVELMK K +
Sbjct: 386 VVSLQYHPEASPGPHDSDNAFKEFVELMKQGKSK 419
>gi|217071810|gb|ACJ84265.1| unknown [Medicago truncatula]
gi|388495080|gb|AFK35606.1| unknown [Medicago truncatula]
Length = 435
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 73/94 (77%), Positives = 82/94 (87%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N++ GRVEIS+QNHNYAVDPATLPKGVEVTHINLND +CAGLA+PA
Sbjct: 330 KFGHHGGNHPVRNLRTGRVEISSQNHNYAVDPATLPKGVEVTHINLNDSSCAGLAFPARK 389
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
V+SLQYH EASPGP DSD F++FVELMK K +
Sbjct: 390 VVSLQYHPEASPGPHDSDNAFKEFVELMKQGKSK 423
>gi|357477159|ref|XP_003608865.1| Carbamoyl-phosphate synthase small chain [Medicago truncatula]
gi|217073732|gb|ACJ85226.1| unknown [Medicago truncatula]
gi|355509920|gb|AES91062.1| Carbamoyl-phosphate synthase small chain [Medicago truncatula]
Length = 431
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 73/94 (77%), Positives = 82/94 (87%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N++ GRVEIS+QNHNYAVDPATLPKGVEVTHINLND +CAGLA+PA
Sbjct: 326 KFGHHGGNHPVRNLRTGRVEISSQNHNYAVDPATLPKGVEVTHINLNDSSCAGLAFPARK 385
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
V+SLQYH EASPGP DSD F++FVELMK K +
Sbjct: 386 VVSLQYHPEASPGPHDSDNAFKEFVELMKQGKSK 419
>gi|359807004|ref|NP_001241589.1| uncharacterized protein LOC100788470 [Glycine max]
gi|255644591|gb|ACU22798.1| unknown [Glycine max]
Length = 438
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 83/95 (87%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N+++G VEISAQNHNYAVDPATLP+GVEVTHINLNDG+CAGLA+PA
Sbjct: 329 KFGHHGGNHPVRNLRSGHVEISAQNHNYAVDPATLPEGVEVTHINLNDGSCAGLAFPAQQ 388
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
+MSLQYH EASPGP DSD FR+FVELMK K R
Sbjct: 389 LMSLQYHPEASPGPHDSDYAFREFVELMKQGKNRT 423
>gi|168002255|ref|XP_001753829.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694805|gb|EDQ81151.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 397
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 70/95 (73%), Positives = 79/95 (83%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++ GRVEISAQNHNYAVDP TLP+GVEVTHINLNDGTCAGL +PA+
Sbjct: 303 KFGHHGGNHPVRHLPTGRVEISAQNHNYAVDPDTLPEGVEVTHINLNDGTCAGLTFPAMK 362
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
MS+QYH EASPGP DSD F DFVE+M+ + A
Sbjct: 363 AMSIQYHPEASPGPHDSDPAFSDFVEMMRKNRSEA 397
>gi|116787068|gb|ABK24362.1| unknown [Picea sitchensis]
Length = 456
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/93 (78%), Positives = 83/93 (89%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N+++GRVEISAQNHNYAVDPATLP+GVEVTHINLNDGTCAGLA+P +
Sbjct: 361 KFGHHGGNHPVRNLRSGRVEISAQNHNYAVDPATLPEGVEVTHINLNDGTCAGLAFPEMK 420
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKY 93
VMSLQYH EASPGP DSD F +FV+LM+ K+
Sbjct: 421 VMSLQYHPEASPGPHDSDPAFYEFVKLMRENKH 453
>gi|357477161|ref|XP_003608866.1| Carbamoyl-phosphate synthase small chain [Medicago truncatula]
gi|355509921|gb|AES91063.1| Carbamoyl-phosphate synthase small chain [Medicago truncatula]
Length = 281
Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 73/95 (76%), Positives = 82/95 (86%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N++ GRVEIS+QNHNYAVDPATLPKGVEVTHINLND +CAGLA+PA
Sbjct: 176 KFGHHGGNHPVRNLRTGRVEISSQNHNYAVDPATLPKGVEVTHINLNDSSCAGLAFPARK 235
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
V+SLQYH EASPGP DSD F++FVELMK K +
Sbjct: 236 VVSLQYHPEASPGPHDSDNAFKEFVELMKQGKSKT 270
>gi|388511022|gb|AFK43577.1| unknown [Medicago truncatula]
Length = 431
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 71/94 (75%), Positives = 80/94 (85%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N++ GRVEIS+QNHNYAVDPATLPKGVEVTHINLND +CAGLA+PA
Sbjct: 326 KFGHHGGNHPVRNLRTGRVEISSQNHNYAVDPATLPKGVEVTHINLNDSSCAGLAFPARK 385
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
V+ QYH EASPGP DSD F++FVELMK K +
Sbjct: 386 VVFFQYHPEASPGPHDSDNAFKEFVELMKQGKSK 419
>gi|145332705|ref|NP_001078218.1| carbamoyl phosphate synthetase A [Arabidopsis thaliana]
gi|332643838|gb|AEE77359.1| carbamoyl phosphate synthetase A [Arabidopsis thaliana]
Length = 358
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/92 (77%), Positives = 81/92 (88%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N + G+VEISAQNHNYAVDPA+LP GVEVTH+NLNDG+CAGL++P +N
Sbjct: 264 KFGHHGGNHPVRNNRTGQVEISAQNHNYAVDPASLPGGVEVTHVNLNDGSCAGLSFPEMN 323
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
VMSLQYH EASPGP DSD FR+F+ELMK K
Sbjct: 324 VMSLQYHPEASPGPHDSDNAFREFIELMKRSK 355
>gi|222154056|gb|ACM47218.1| plastid carbamoylphosphate synthetase small subunit 1 [Medicago
truncatula]
Length = 432
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/89 (78%), Positives = 80/89 (89%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N++ GRVEIS+QNHNYAVDPATLP+GVEVTHINLND +CAGLA+PA
Sbjct: 327 KFGHHGGNHPVRNLRTGRVEISSQNHNYAVDPATLPEGVEVTHINLNDSSCAGLAFPAQK 386
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++SLQYH EASPGP DSD FR+F+ELMK
Sbjct: 387 IVSLQYHPEASPGPHDSDNAFREFIELMK 415
>gi|357464521|ref|XP_003602542.1| Carbamoyl-phosphate synthase small chain [Medicago truncatula]
gi|355491590|gb|AES72793.1| Carbamoyl-phosphate synthase small chain [Medicago truncatula]
Length = 417
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/92 (77%), Positives = 81/92 (88%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N++ GRVEIS+QNHNYAVDPATLP+GVEVTHINLND +CAGLA+PA
Sbjct: 312 KFGHHGGNHPVRNLRTGRVEISSQNHNYAVDPATLPEGVEVTHINLNDSSCAGLAFPAQK 371
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
++SLQYH EASPGP DSD FR+F+ELMK K
Sbjct: 372 IVSLQYHPEASPGPHDSDNAFREFIELMKHEK 403
>gi|297830456|ref|XP_002883110.1| carbamoyl phosphate synthetase small subunit [Arabidopsis lyrata
subsp. lyrata]
gi|297328950|gb|EFH59369.1| carbamoyl phosphate synthetase small subunit [Arabidopsis lyrata
subsp. lyrata]
Length = 433
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 80/92 (86%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N + G VEISAQNHNYAVDPA+LP GVEVTH+NLNDG+CAGL++PA+N
Sbjct: 339 KFGHHGGNHPVCNNRTGHVEISAQNHNYAVDPASLPSGVEVTHVNLNDGSCAGLSFPAMN 398
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
VMSLQYH EASPGP DSD F +FVELMK K
Sbjct: 399 VMSLQYHPEASPGPHDSDNAFGEFVELMKRFK 430
>gi|21535793|emb|CAC85725.1| putative carbamoyl phosphate synthase small subunit [Nicotiana
tabacum]
Length = 432
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 69/95 (72%), Positives = 81/95 (85%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N++NG VEISAQNHNYAVDP +LP+GVEVTH+NLNDG+CAGLA +
Sbjct: 338 KFGHHGGNHPVRNLRNGCVEISAQNHNYAVDPESLPEGVEVTHVNLNDGSCAGLASFKMK 397
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
+MSLQYH EASPGP DSD VF +F++LMK K +A
Sbjct: 398 LMSLQYHPEASPGPHDSDPVFGEFIQLMKQEKVKA 432
>gi|413938492|gb|AFW73043.1| hypothetical protein ZEAMMB73_532377 [Zea mays]
Length = 439
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 62/90 (68%), Positives = 77/90 (85%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++++GRV+ISAQNHNYAVDP +LP+G EVTH+NLND +CAGL Y +
Sbjct: 347 KFGHHGGNHPVCDLRSGRVDISAQNHNYAVDPESLPEGAEVTHVNLNDNSCAGLQYAKMK 406
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
++SLQYH E+SPGP DSD F +F+ELMKS
Sbjct: 407 LVSLQYHPESSPGPHDSDTAFGEFIELMKS 436
>gi|212720831|ref|NP_001132055.1| uncharacterized protein LOC100193467 [Zea mays]
gi|194693312|gb|ACF80740.1| unknown [Zea mays]
Length = 446
Score = 147 bits (370), Expect = 9e-34, Method: Composition-based stats.
Identities = 62/90 (68%), Positives = 77/90 (85%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++++GRV+ISAQNHNYAVDP +LP+G +VTH+NLND +CAGL Y +
Sbjct: 354 KFGHHGGNHPVCDLRSGRVDISAQNHNYAVDPESLPEGAKVTHVNLNDNSCAGLQYSKMK 413
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
+MSLQYH E+SPGP DSD F +F+ELMKS
Sbjct: 414 LMSLQYHPESSPGPHDSDTAFGEFIELMKS 443
>gi|242066252|ref|XP_002454415.1| hypothetical protein SORBIDRAFT_04g030390 [Sorghum bicolor]
gi|241934246|gb|EES07391.1| hypothetical protein SORBIDRAFT_04g030390 [Sorghum bicolor]
Length = 446
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 62/90 (68%), Positives = 77/90 (85%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++++GRV+ISAQNHNYAVDP +LP+G +VTH+NLND +CAGL Y +
Sbjct: 354 KFGHHGGNHPVCDLRSGRVDISAQNHNYAVDPESLPEGAKVTHVNLNDNSCAGLQYSKMK 413
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
+MSLQYH E+SPGP DSD F +F+ELMKS
Sbjct: 414 LMSLQYHPESSPGPHDSDTAFGEFIELMKS 443
>gi|168015574|ref|XP_001760325.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688339|gb|EDQ74716.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 419
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 70/115 (60%), Positives = 80/115 (69%), Gaps = 20/115 (17%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQ--------------------NHNYAVDPATLPKGVE 40
KFGHHGGNHPV ++ GRVEISAQ NHNYAVDP TLP+GVE
Sbjct: 305 KFGHHGGNHPVRHLPTGRVEISAQVIVMIQKLTRSLFNDFVCAQNHNYAVDPDTLPEGVE 364
Query: 41 VTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
VTHINLNDGTCAGL +PA+ MS+QYH EASPGP DSD F DFVE+M+ K ++
Sbjct: 365 VTHINLNDGTCAGLVFPAMKAMSIQYHPEASPGPHDSDQAFFDFVEMMRKNKSQS 419
>gi|357137283|ref|XP_003570230.1| PREDICTED: carbamoyl-phosphate synthase small chain-like
[Brachypodium distachyon]
Length = 438
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 78/90 (86%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV + + GRV+ISAQNHNYAVDP +LP+GV+VTHINLND +CAGLA+P +
Sbjct: 346 KFGHHGGNHPVRDNRTGRVDISAQNHNYAVDPESLPEGVQVTHINLNDQSCAGLAFPKMK 405
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
+MSLQYH E+SPGP DSD F +FVELMKS
Sbjct: 406 LMSLQYHPESSPGPHDSDLAFGEFVELMKS 435
>gi|255571716|ref|XP_002526801.1| Carbamoyl-phosphate synthase small chain, putative [Ricinus
communis]
gi|223533805|gb|EEF35536.1| Carbamoyl-phosphate synthase small chain, putative [Ricinus
communis]
Length = 418
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/78 (84%), Positives = 73/78 (93%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N+++ RVEISAQNHNYAVDPA+LP+GVEVTHINLNDG+CAGLAYP LN
Sbjct: 338 KFGHHGGNHPVRNVRHNRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAYPVLN 397
Query: 61 VMSLQYHLEASPGPDDSD 78
+MSLQYH EASPGP DSD
Sbjct: 398 IMSLQYHPEASPGPHDSD 415
>gi|388498956|gb|AFK37544.1| unknown [Lotus japonicus]
Length = 442
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/82 (80%), Positives = 74/82 (90%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N++ GRVEIS+QNHNYAVDPATLP+GVEVTHINLNDG+CAGLA+PA
Sbjct: 329 KFGHHGGNHPVRNLRLGRVEISSQNHNYAVDPATLPEGVEVTHINLNDGSCAGLAFPAKK 388
Query: 61 VMSLQYHLEASPGPDDSDCVFR 82
+MSLQYH EASPGP DSD F+
Sbjct: 389 IMSLQYHPEASPGPHDSDNAFK 410
>gi|302794346|ref|XP_002978937.1| hypothetical protein SELMODRAFT_177367 [Selaginella moellendorffii]
gi|300153255|gb|EFJ19894.1| hypothetical protein SELMODRAFT_177367 [Selaginella moellendorffii]
Length = 446
Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 64/88 (72%), Positives = 76/88 (86%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++ GRVEIS+QNHNYAVD ATLP+GVEVTH+NLNDGTCAGL YPA+
Sbjct: 352 KFGHHGGNHPVRHLPTGRVEISSQNHNYAVDIATLPEGVEVTHVNLNDGTCAGLTYPAMK 411
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
VM +QYH E+SPGP D+D F +FV++M
Sbjct: 412 VMGIQYHPESSPGPHDADPAFFEFVQMM 439
>gi|302809523|ref|XP_002986454.1| hypothetical protein SELMODRAFT_124090 [Selaginella moellendorffii]
gi|300145637|gb|EFJ12311.1| hypothetical protein SELMODRAFT_124090 [Selaginella moellendorffii]
Length = 385
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/88 (72%), Positives = 76/88 (86%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++ GRVEIS+QNHNYAVD ATLP+GVEVTH+NLNDGTCAGL YPA+
Sbjct: 291 KFGHHGGNHPVRHLPTGRVEISSQNHNYAVDIATLPEGVEVTHVNLNDGTCAGLTYPAMK 350
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
VM +QYH E+SPGP D+D F +FV++M
Sbjct: 351 VMGIQYHPESSPGPHDADPAFFEFVQMM 378
>gi|195635437|gb|ACG37187.1| carbamoyl-phosphate synthase small chain [Zea mays]
Length = 446
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 78/90 (86%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++++GRV+ISAQNHNYAVDP +LP+GVEVTH+NLND +CAGL Y +
Sbjct: 354 KFGHHGGNHPVCDLRSGRVDISAQNHNYAVDPESLPEGVEVTHVNLNDNSCAGLQYAKMK 413
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
++SLQYH E+SPGP DSD F +F+ELMKS
Sbjct: 414 LVSLQYHPESSPGPHDSDTAFGEFIELMKS 443
>gi|125540839|gb|EAY87234.1| hypothetical protein OsI_08636 [Oryza sativa Indica Group]
Length = 446
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 78/89 (87%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++++GRV+ISAQNHNYAVDP +LP+GV+VTHINLND +CAGL YP +
Sbjct: 354 KFGHHGGNHPVCDLRSGRVDISAQNHNYAVDPESLPEGVKVTHINLNDNSCAGLQYPKMK 413
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++SLQYH E+SPGP DSD F +F+E+MK
Sbjct: 414 LLSLQYHPESSPGPHDSDLAFGEFIEMMK 442
>gi|302840078|ref|XP_002951595.1| hypothetical protein VOLCADRAFT_81499 [Volvox carteri f.
nagariensis]
gi|300263204|gb|EFJ47406.1| hypothetical protein VOLCADRAFT_81499 [Volvox carteri f.
nagariensis]
Length = 449
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 73/90 (81%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHP+ + GRVEISAQNHN+AVDPATLP GVEVTH+NLNDGTCAG+ Y
Sbjct: 357 KFGHHGGNHPIRYMPTGRVEISAQNHNFAVDPATLPAGVEVTHVNLNDGTCAGMVYKEKK 416
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
M++QYH EASPGP D+D F FVE+M++
Sbjct: 417 AMTIQYHPEASPGPHDADICFEQFVEMMRA 446
>gi|226504602|ref|NP_001141795.1| uncharacterized protein LOC100273931 [Zea mays]
gi|194700674|gb|ACF84421.1| unknown [Zea mays]
gi|238009710|gb|ACR35890.1| unknown [Zea mays]
gi|413938493|gb|AFW73044.1| carbamoyl-phosphate synthase small chain [Zea mays]
Length = 446
Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 77/90 (85%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++++GRV+ISAQNHNYAVDP +LP+G EVTH+NLND +CAGL Y +
Sbjct: 354 KFGHHGGNHPVCDLRSGRVDISAQNHNYAVDPESLPEGAEVTHVNLNDNSCAGLQYAKMK 413
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
++SLQYH E+SPGP DSD F +F+ELMKS
Sbjct: 414 LVSLQYHPESSPGPHDSDTAFGEFIELMKS 443
>gi|195637158|gb|ACG38047.1| carbamoyl-phosphate synthase small chain [Zea mays]
Length = 446
Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 77/90 (85%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++++GRV+ISAQNHNYAVDP +LP+G EVTH+NLND +CAGL Y +
Sbjct: 354 KFGHHGGNHPVCDLRSGRVDISAQNHNYAVDPESLPEGAEVTHVNLNDNSCAGLQYAKMK 413
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
++SLQYH E+SPGP DSD F +F+ELMKS
Sbjct: 414 LVSLQYHPESSPGPHDSDTAFGEFIELMKS 443
>gi|195624346|gb|ACG34003.1| carbamoyl-phosphate synthase small chain [Zea mays]
Length = 446
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 77/90 (85%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++++GRV+ISAQNHNYAVDP +LP+G +VTH+NLND +CAGL Y +
Sbjct: 354 KFGHHGGNHPVCDLRSGRVDISAQNHNYAVDPESLPEGAKVTHVNLNDNSCAGLQYSKMK 413
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
+MSLQYH E+SPGP DSD F +F+ELMKS
Sbjct: 414 LMSLQYHPESSPGPHDSDTAFGEFIELMKS 443
>gi|413923626|gb|AFW63558.1| carbamoyl-phosphate synthase small chain [Zea mays]
Length = 481
Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 77/90 (85%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++++GRV+ISAQNHNYAVDP +LP+G +VTH+NLND +CAGL Y +
Sbjct: 389 KFGHHGGNHPVCDLRSGRVDISAQNHNYAVDPESLPEGAKVTHVNLNDNSCAGLQYSKMK 448
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
+MSLQYH E+SPGP DSD F +F+ELMKS
Sbjct: 449 LMSLQYHPESSPGPHDSDTAFGEFIELMKS 478
>gi|238802160|emb|CAP74552.1| putative TdLFC69 protein [Triticum durum]
Length = 94
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 77/90 (85%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV + + GRV+ISAQNHNYAVDP +LP+GV+VTHINLND +CAGL +P +
Sbjct: 2 KFGHHGGNHPVRDNRTGRVDISAQNHNYAVDPESLPEGVQVTHINLNDQSCAGLVFPKMK 61
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
+MSLQYH E+SPGP DSD F +FVELMK+
Sbjct: 62 LMSLQYHPESSPGPHDSDLAFGEFVELMKN 91
>gi|41053165|dbj|BAD08107.1| carbamoyl-phosphate synthetase small subunit-like [Oryza sativa
Japonica Group]
Length = 110
Score = 140 bits (354), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 79/90 (87%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++++GRV+ISAQNHNYAVDP +LP+GV+VTHINLND +CAGL YP +
Sbjct: 18 KFGHHGGNHPVCDLRSGRVDISAQNHNYAVDPESLPEGVKVTHINLNDNSCAGLQYPKMK 77
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
++SLQYH E+SPGP DSD F +F+E+MK+
Sbjct: 78 LLSLQYHPESSPGPHDSDLAFGEFIEMMKN 107
>gi|302819655|ref|XP_002991497.1| hypothetical protein SELMODRAFT_429828 [Selaginella moellendorffii]
gi|300140699|gb|EFJ07419.1| hypothetical protein SELMODRAFT_429828 [Selaginella moellendorffii]
Length = 405
Score = 140 bits (354), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 75/88 (85%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++ GRVEIS+QNHNYAVD ATLP+GVEVTH+NLNDGTCAGL Y A+
Sbjct: 311 KFGHHGGNHPVRHLPTGRVEISSQNHNYAVDIATLPEGVEVTHVNLNDGTCAGLTYTAMK 370
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
VM +QYH E+SPGP D+D F +FV++M
Sbjct: 371 VMGIQYHPESSPGPHDADPAFFEFVQMM 398
>gi|297788233|ref|XP_002862258.1| hypothetical protein ARALYDRAFT_920999 [Arabidopsis lyrata subsp.
lyrata]
gi|297307577|gb|EFH38516.1| hypothetical protein ARALYDRAFT_920999 [Arabidopsis lyrata subsp.
lyrata]
Length = 375
Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 66/89 (74%), Positives = 74/89 (83%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N + G VEISAQNHNYAVDPA+LP GVEVTH+NLNDG+CAGL++PA+N
Sbjct: 277 KFGHHGGNHPVCNNRTGHVEISAQNHNYAVDPASLPSGVEVTHVNLNDGSCAGLSFPAMN 336
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
VMSLQYH EASPGP DSD F L+
Sbjct: 337 VMSLQYHPEASPGPHDSDNGITLFFSLLS 365
>gi|159466324|ref|XP_001691359.1| carbamoyl phosphate synthase, small subunit [Chlamydomonas
reinhardtii]
gi|158279331|gb|EDP05092.1| carbamoyl phosphate synthase, small subunit [Chlamydomonas
reinhardtii]
Length = 461
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 74/92 (80%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHP+ + GRVEISAQNHN+AVDP+TLP GVEVTHINLNDGTCAG+ +
Sbjct: 364 KFGHHGGNHPIRYMPTGRVEISAQNHNFAVDPSTLPAGVEVTHINLNDGTCAGMVFKEKK 423
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
M++QYH EASPGP D+D F FV++M++ K
Sbjct: 424 AMTIQYHPEASPGPHDADVCFEQFVDMMRAEK 455
>gi|194705950|gb|ACF87059.1| unknown [Zea mays]
gi|413938494|gb|AFW73045.1| hypothetical protein ZEAMMB73_532377 [Zea mays]
Length = 320
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 77/90 (85%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++++GRV+ISAQNHNYAVDP +LP+G EVTH+NLND +CAGL Y +
Sbjct: 228 KFGHHGGNHPVCDLRSGRVDISAQNHNYAVDPESLPEGAEVTHVNLNDNSCAGLQYAKMK 287
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
++SLQYH E+SPGP DSD F +F+ELMKS
Sbjct: 288 LVSLQYHPESSPGPHDSDTAFGEFIELMKS 317
>gi|284519836|gb|ADB92668.1| carbamoyl-phosphate synthase [Populus tremula x Populus alba]
Length = 400
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/74 (86%), Positives = 69/74 (93%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N+ RVEISAQNHNYAVDPA+LP+GVEVTHINLNDG+CAGLA+PALN
Sbjct: 326 KFGHHGGNHPVRNLLANRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPALN 385
Query: 61 VMSLQYHLEASPGP 74
VMSLQYH EASPGP
Sbjct: 386 VMSLQYHPEASPGP 399
>gi|303289795|ref|XP_003064185.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454501|gb|EEH51807.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 340
Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 65/92 (70%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV G VEIS+QNHN+AVDP TLP VEVTH+NLNDGTCAG+ YPAL
Sbjct: 250 KFGHHGGNHPVRG-PTGAVEISSQNHNFAVDPKTLPADVEVTHVNLNDGTCAGMIYPALK 308
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
M++QYH EASPGP DSD F FVE+MK+ K
Sbjct: 309 AMTIQYHPEASPGPHDSDGSFETFVEMMKAGK 340
>gi|308813157|ref|XP_003083885.1| putative carbamoyl phosphate synthase small subunit (ISS)
[Ostreococcus tauri]
gi|116055767|emb|CAL57852.1| putative carbamoyl phosphate synthase small subunit (ISS)
[Ostreococcus tauri]
Length = 771
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 58/92 (63%), Positives = 72/92 (78%), Gaps = 1/92 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +G VEIS+QNHN+AVDP +LP G+ V+H+NLNDGTCAG+ +P
Sbjct: 248 KFGHHGGNHPVR-AADGAVEISSQNHNFAVDPKSLPAGITVSHVNLNDGTCAGMVWPEKR 306
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
M++QYH EASPGP DSD F DFV++M+ K
Sbjct: 307 AMTIQYHPEASPGPHDSDRCFADFVQMMRDSK 338
>gi|19387248|gb|AAL87160.1|AF480496_14 putative carbamoyl phosphate synthetase small subunit [Oryza sativa
Japonica Group]
Length = 462
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 78/105 (74%), Gaps = 16/105 (15%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQ----------------NHNYAVDPATLPKGVEVTHI 44
KFGHHGGNHPV ++++GRV+ISAQ NHNYAVDP +LP+GV+VTHI
Sbjct: 354 KFGHHGGNHPVCDLRSGRVDISAQAVRYIQFNQLLPPFHNNHNYAVDPESLPEGVKVTHI 413
Query: 45 NLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
NLND +CAGL YP + ++SLQYH E+SPGP DSD F +F+E+MK
Sbjct: 414 NLNDNSCAGLQYPKMKLLSLQYHPESSPGPHDSDLAFGEFIEMMK 458
>gi|413923627|gb|AFW63559.1| hypothetical protein ZEAMMB73_621614 [Zea mays]
Length = 488
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 55/78 (70%), Positives = 68/78 (87%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++++GRV+ISAQNHNYAVDP +LP+G +VTH+NLND +CAGL Y +
Sbjct: 389 KFGHHGGNHPVCDLRSGRVDISAQNHNYAVDPESLPEGAKVTHVNLNDNSCAGLQYSKMK 448
Query: 61 VMSLQYHLEASPGPDDSD 78
+MSLQYH E+SPGP DSD
Sbjct: 449 LMSLQYHPESSPGPHDSD 466
>gi|255078068|ref|XP_002502614.1| predicted protein [Micromonas sp. RCC299]
gi|226517879|gb|ACO63872.1| predicted protein [Micromonas sp. RCC299]
Length = 429
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV GRVEIS+QNHN+AV P +LPK VEV+HINLNDGTCAG+ Y
Sbjct: 334 KFGHHGGNHPVRG-PTGRVEISSQNHNFAVKPNSLPKEVEVSHINLNDGTCAGMVYREKR 392
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
M++QYH EASPGP DSD F DFV +MK+ K
Sbjct: 393 AMTIQYHPEASPGPHDSDPCFEDFVHMMKAAK 424
>gi|145355504|ref|XP_001422001.1| Carbamoyl-phosphate synthase S chain [Ostreococcus lucimarinus
CCE9901]
gi|144582240|gb|ABP00295.1| Carbamoyl-phosphate synthase S chain [Ostreococcus lucimarinus
CCE9901]
Length = 415
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 72/92 (78%), Gaps = 1/92 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV + VEIS+QNHN+AVDP +LP GV+V+H+NLNDGTCAG+ +P
Sbjct: 324 KFGHHGGNHPVRGPDDA-VEISSQNHNFAVDPKSLPAGVQVSHVNLNDGTCAGMVWPEQR 382
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
M++QYH EASPGP DSD F DFV++M+ K
Sbjct: 383 AMTIQYHPEASPGPHDSDRCFADFVQMMRESK 414
>gi|384245190|gb|EIE18685.1| carbamoyl-phosphate synthase S chain [Coccomyxa subellipsoidea
C-169]
Length = 425
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 70/92 (76%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHP+ R+EISAQNHNYAV+PATLP VEVTHINLNDGTCAGL
Sbjct: 324 KFGHHGGNHPIRFGPTSRIEISAQNHNYAVNPATLPDDVEVTHINLNDGTCAGLLCKPKK 383
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
MS+QYH EASPGP D+D F F++++K+ +
Sbjct: 384 AMSIQYHPEASPGPHDADVCFEQFIDMLKAER 415
>gi|125583409|gb|EAZ24340.1| hypothetical protein OsJ_08093 [Oryza sativa Japonica Group]
Length = 422
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 78/116 (67%), Gaps = 27/116 (23%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQ---------------------------NHNYAVDPA 33
KFGHHGGNHPV ++++GRV+ISAQ NHNYAVDP
Sbjct: 303 KFGHHGGNHPVCDLRSGRVDISAQAFRITGVGRGAGLLAVTLPDENLELLRNHNYAVDPE 362
Query: 34 TLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+LP+GV+VTHINLND +CAGL YP + ++SLQYH E+SPGP DSD F +F+E+MK
Sbjct: 363 SLPEGVKVTHINLNDNSCAGLQYPKMKLLSLQYHPESSPGPHDSDLAFGEFIEMMK 418
>gi|41053163|dbj|BAD08105.1| putative carbamoyl-phosphate synthetase small subunit [Oryza sativa
Japonica Group]
Length = 473
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 78/116 (67%), Gaps = 27/116 (23%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQ---------------------------NHNYAVDPA 33
KFGHHGGNHPV ++++GRV+ISAQ NHNYAVDP
Sbjct: 354 KFGHHGGNHPVCDLRSGRVDISAQAFRITGVGRGAGLLAVTLPDENLELLRNHNYAVDPE 413
Query: 34 TLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+LP+GV+VTHINLND +CAGL YP + ++SLQYH E+SPGP DSD F +F+E+MK
Sbjct: 414 SLPEGVKVTHINLNDNSCAGLQYPKMKLLSLQYHPESSPGPHDSDLAFGEFIEMMK 469
>gi|57234040|ref|YP_181914.1| carbamoyl phosphate synthase small subunit [Dehalococcoides
ethenogenes 195]
gi|57224488|gb|AAW39545.1| carbamoyl-phosphate synthase, small subunit [Dehalococcoides
ethenogenes 195]
Length = 364
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 72/92 (78%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGNHPV ++ +GRV I++QNH Y++DPATL +G+EV+HINLNDGT GL + L
Sbjct: 272 KFGHRGGNHPVKDLASGRVYITSQNHGYSLDPATLKEGLEVSHINLNDGTVEGLRHRELP 331
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+QYH EASPGP DS +F+ FVE++K K
Sbjct: 332 VFSIQYHSEASPGPMDSTYLFKQFVEMIKQTK 363
>gi|307110858|gb|EFN59093.1| hypothetical protein CHLNCDRAFT_18988 [Chlorella variabilis]
Length = 449
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 65/81 (80%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHP+ + GR+EISAQNHN+AVDPATLP VE++ INLNDGTCAG+ +P L
Sbjct: 330 KFGHHGGNHPLRHTPTGRIEISAQNHNFAVDPATLPPEVEISLINLNDGTCAGMVHPGLK 389
Query: 61 VMSLQYHLEASPGPDDSDCVF 81
M++Q H EASPGP DSD F
Sbjct: 390 AMTVQSHPEASPGPHDSDVAF 410
>gi|270308371|ref|YP_003330429.1| carbamoyl-phosphate synthase, small subunit [Dehalococcoides sp.
VS]
gi|270154263|gb|ACZ62101.1| carbamoyl-phosphate synthase, small subunit [Dehalococcoides sp.
VS]
Length = 364
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 72/92 (78%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGNHPV ++ +GRV I++QNH Y++DPATL +G+EV+HINLNDGT GL + L
Sbjct: 272 KFGHRGGNHPVKDLASGRVYITSQNHGYSLDPATLKEGLEVSHINLNDGTVEGLRHRELP 331
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+QYH EASPGP DS +F+ FVE+++ K
Sbjct: 332 VFSIQYHSEASPGPMDSTYLFKQFVEMIRQAK 363
>gi|225850824|ref|YP_002731058.1| carbamoyl phosphate synthase small subunit [Persephonella marina
EX-H1]
gi|225646464|gb|ACO04650.1| carbamoyl-phosphate synthase, small subunit [Persephonella marina
EX-H1]
Length = 376
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 54/92 (58%), Positives = 67/92 (72%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
+FGHHGGNHPV N++ G+VEI+AQNHNYA DP LP E+THINLND T G+
Sbjct: 284 EFGHHGGNHPVKNLKTGKVEITAQNHNYATDPDKLPSDAEITHINLNDDTIEGIRLKDYP 343
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+QYH E+SPGP DS +F DFV+L++ K
Sbjct: 344 VFSIQYHPESSPGPHDSLYIFDDFVKLIEECK 375
>gi|374310270|ref|YP_005056700.1| carbamoyl-phosphate synthase small subunit [Granulicella mallensis
MP5ACTX8]
gi|358752280|gb|AEU35670.1| carbamoyl-phosphate synthase, small subunit [Granulicella mallensis
MP5ACTX8]
Length = 378
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 70/92 (76%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHP+ N++ G+VEI+AQNHN+ VDP +LP V VTH+NLND T AGL +
Sbjct: 285 KFGHHGGNHPIKNLETGKVEITAQNHNFNVDPKSLPDDVAVTHVNLNDDTLAGLKHKTDP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP DS +FRDF ++M+ +
Sbjct: 345 MFSVQYHPEASPGPHDSHYLFRDFRKMMEEWR 376
>gi|412986146|emb|CCO17346.1| carbamoyl-phosphate synthase, small subunit [Bathycoccus prasinos]
Length = 444
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 71/95 (74%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N VEISAQNHN+AVD +LPK V+V+H+NLNDGTCAG+ +
Sbjct: 347 KFGHHGGNHPVRNEFTQAVEISAQNHNFAVDLNSLPKEVKVSHLNLNDGTCAGMVWEEKM 406
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
M++QYH EASPGP DSD F FV+++++ K A
Sbjct: 407 AMTIQYHPEASPGPHDSDNCFAQFVDMIRANKGMA 441
>gi|320107213|ref|YP_004182803.1| carbamoyl-phosphate synthase small subunit [Terriglobus saanensis
SP1PR4]
gi|319925734|gb|ADV82809.1| carbamoyl-phosphate synthase, small subunit [Terriglobus saanensis
SP1PR4]
Length = 378
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 70/92 (76%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHP+ N++ G+VEI++QNHNYAVDP +L V VTH+NLND TCAGL +
Sbjct: 286 KFGHHGANHPIKNLETGKVEITSQNHNYAVDPESLGSDVSVTHVNLNDQTCAGLKHNEHP 345
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP DS +F+DF ++M+ K
Sbjct: 346 MFSVQYHPEASPGPHDSHYLFKDFRKMMEEWK 377
>gi|163782546|ref|ZP_02177543.1| carbamoyl-phosphate synthase small subunit [Hydrogenivirga sp.
128-5-R1-1]
gi|159882119|gb|EDP75626.1| carbamoyl-phosphate synthase small subunit [Hydrogenivirga sp.
128-5-R1-1]
Length = 374
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 51/89 (57%), Positives = 69/89 (77%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ G+VEI+AQNHN+A+DP +LP VEVTH+NL D T G+ + +
Sbjct: 282 KFGHHGGNHPVKDLRTGKVEITAQNHNFAIDPDSLPPEVEVTHVNLLDNTVEGIRHREIP 341
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V ++QYH E SPGP DS +F++FVE+ K
Sbjct: 342 VFAVQYHPENSPGPHDSYYLFKEFVEIAK 370
>gi|188997272|ref|YP_001931523.1| carbamoyl phosphate synthase small subunit [Sulfurihydrogenibium
sp. YO3AOP1]
gi|188932339|gb|ACD66969.1| carbamoyl-phosphate synthase, small subunit [Sulfurihydrogenibium
sp. YO3AOP1]
Length = 376
Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 52/92 (56%), Positives = 69/92 (75%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
+FGHHGGNHPV N++ G+VEI+AQNHNYA D + LP+ VE+THINLND T G+ +
Sbjct: 284 EFGHHGGNHPVKNLKTGKVEITAQNHNYATDESKLPQDVEITHINLNDNTVEGMRHKNYP 343
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+Q+H EA+PGP DS +F +F L+K+ K
Sbjct: 344 VFSIQHHPEAAPGPHDSFYIFDEFYNLIKACK 375
>gi|237755838|ref|ZP_04584436.1| carbamoyl-phosphate synthase, small subunit [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237692003|gb|EEP61013.1| carbamoyl-phosphate synthase, small subunit [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 376
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 52/92 (56%), Positives = 69/92 (75%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
+FGHHGGNHPV N++ G+VEI+AQNHNYA D + LP+ VE+THINLND T G+ +
Sbjct: 284 EFGHHGGNHPVKNLKTGKVEITAQNHNYATDESKLPQDVEITHINLNDNTVEGMRHKNYP 343
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+Q+H EA+PGP DS +F +F L+K+ K
Sbjct: 344 VFSIQHHPEAAPGPHDSFYIFDEFYNLIKACK 375
>gi|322435195|ref|YP_004217407.1| carbamoyl-phosphate synthase small subunit [Granulicella tundricola
MP5ACTX9]
gi|321162922|gb|ADW68627.1| carbamoyl-phosphate synthase, small subunit [Granulicella
tundricola MP5ACTX9]
Length = 380
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 68/92 (73%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHP+ N + G+VEI+AQNHNY VDP +LP VE TH NLND T AGL +
Sbjct: 288 KFGHHGGNHPILNHRTGKVEITAQNHNYNVDPESLPSDVEKTHTNLNDQTLAGLRHKTDP 347
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP DS +FRDF ++M+ K
Sbjct: 348 MFSVQYHPEASPGPHDSHYLFRDFRKMMEEWK 379
>gi|147669651|ref|YP_001214469.1| carbamoyl phosphate synthase small subunit [Dehalococcoides sp.
BAV1]
gi|146270599|gb|ABQ17591.1| carbamoyl-phosphate synthase small subunit [Dehalococcoides sp.
BAV1]
Length = 364
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 70/92 (76%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGNHPV ++++GRV I++QNH Y++DP TL ++V+H+NLNDGT GL + L
Sbjct: 272 KFGHRGGNHPVKDLESGRVYITSQNHGYSIDPVTLKNDLKVSHLNLNDGTVEGLRHRELP 331
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+QYH EASPGP DS +F+ FVE++K K
Sbjct: 332 VFSIQYHSEASPGPMDSTYLFKQFVEMIKQTK 363
>gi|452203873|ref|YP_007484006.1| carbamoyl-phosphate synthase small subunit [Dehalococcoides
mccartyi DCMB5]
gi|452110932|gb|AGG06664.1| carbamoyl-phosphate synthase small subunit [Dehalococcoides
mccartyi DCMB5]
Length = 364
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 70/92 (76%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGNHPV ++++GRV I++QNH Y++DP TL ++V+H+NLNDGT GL + L
Sbjct: 272 KFGHRGGNHPVKDLESGRVYITSQNHGYSIDPVTLKNDLKVSHLNLNDGTVEGLRHRELP 331
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+QYH EASPGP DS +F+ FVE++K K
Sbjct: 332 VFSIQYHSEASPGPMDSTYLFKQFVEMIKQTK 363
>gi|73748890|ref|YP_308129.1| carbamoyl phosphate synthase small subunit [Dehalococcoides sp.
CBDB1]
gi|73660606|emb|CAI83213.1| carbamoyl-phosphate synthase, small subunit [Dehalococcoides sp.
CBDB1]
Length = 364
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 70/92 (76%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGNHPV ++++GRV I++QNH Y++DP TL ++V+H+NLNDGT GL + L
Sbjct: 272 KFGHRGGNHPVKDLESGRVYITSQNHGYSIDPVTLKNDLKVSHLNLNDGTVEGLRHRELP 331
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+QYH EASPGP DS +F+ FVE++K K
Sbjct: 332 VFSIQYHSEASPGPMDSTYLFKQFVEMIKQTK 363
>gi|289432886|ref|YP_003462759.1| carbamoyl-phosphate synthase small subunit [Dehalococcoides sp. GT]
gi|452205370|ref|YP_007485499.1| carbamoyl-phosphate synthase small subunit [Dehalococcoides
mccartyi BTF08]
gi|288946606|gb|ADC74303.1| carbamoyl-phosphate synthase, small subunit [Dehalococcoides sp.
GT]
gi|452112426|gb|AGG08157.1| carbamoyl-phosphate synthase small subunit [Dehalococcoides
mccartyi BTF08]
Length = 364
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 70/92 (76%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGNHPV ++++GRV I++QNH Y++DP TL ++V+H+NLNDGT GL + L
Sbjct: 272 KFGHRGGNHPVKDLESGRVYITSQNHGYSIDPVTLKNDLKVSHLNLNDGTVEGLRHRELP 331
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+QYH EASPGP DS +F+ FVE++K K
Sbjct: 332 VFSIQYHSEASPGPMDSTYLFKQFVEMIKQTK 363
>gi|15605910|ref|NP_213287.1| carbamoyl phosphate synthase small subunit [Aquifex aeolicus VF5]
gi|21759015|sp|O66727.1|CARA_AQUAE RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|2983067|gb|AAC06674.1| carbamoyl phosphate synthetase small subunit [Aquifex aeolicus VF5]
Length = 371
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/89 (53%), Positives = 70/89 (78%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ G++EI+AQNHN+A+DP +LP+ VEVTH+NL D T G+ + L
Sbjct: 282 KFGHHGGNHPVKDLRTGKIEITAQNHNFAIDPESLPEDVEVTHLNLLDNTVEGIKHKHLP 341
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ ++QYH E SPGP DS +F++FV++ +
Sbjct: 342 IFAVQYHPENSPGPHDSYYLFKEFVKMAQ 370
>gi|288818563|ref|YP_003432911.1| carbamoyl-phosphate synthase small subunit [Hydrogenobacter
thermophilus TK-6]
gi|384129316|ref|YP_005511929.1| carbamoyl-phosphate synthase small subunit [Hydrogenobacter
thermophilus TK-6]
gi|288787963|dbj|BAI69710.1| carbamoyl-phosphate synthase small subunit [Hydrogenobacter
thermophilus TK-6]
gi|308752153|gb|ADO45636.1| carbamoyl-phosphate synthase, small subunit [Hydrogenobacter
thermophilus TK-6]
Length = 371
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 52/87 (59%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++++G +EI+AQNHN+AVDP +L K VE+THINL DGT G + L
Sbjct: 281 KFGHHGGNHPVKDLRSGHIEITAQNHNFAVDPESL-KDVEITHINLLDGTLEGFRHKYLP 339
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVEL 87
+ LQYH EASPGP D+ VF++F++L
Sbjct: 340 IYCLQYHPEASPGPHDAKGVFKEFLQL 366
>gi|284161776|ref|YP_003400399.1| carbamoyl-phosphate synthase small subunit [Archaeoglobus profundus
DSM 5631]
gi|284011773|gb|ADB57726.1| carbamoyl-phosphate synthase, small subunit [Archaeoglobus
profundus DSM 5631]
Length = 358
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 52/89 (58%), Positives = 66/89 (74%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG N PV + + GRV IS+QNHN+AVD TLPKG++VT INLND T GL + L
Sbjct: 268 KFGHHGSNQPVKDFETGRVFISSQNHNFAVDENTLPKGMKVTQINLNDYTVEGLRHEELP 327
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+MS+QYH EA PGP D+ F +FV+++K
Sbjct: 328 LMSVQYHPEAGPGPHDTYFFFDEFVKMLK 356
>gi|225847990|ref|YP_002728153.1| carbamoyl phosphate synthase small subunit [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225643636|gb|ACN98686.1| carbamoyl-phosphate synthase, small subunit [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 375
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 67/92 (72%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
+FGHHGGNHPV N++ GRVEI+AQNHNYA D + LP VE+THINLND T G+ +
Sbjct: 283 EFGHHGGNHPVKNLKTGRVEITAQNHNYATDESKLPADVEITHINLNDSTVEGMRHKNYP 342
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+Q+H EA+PGP DS +F +F L+K K
Sbjct: 343 VFSIQHHPEAAPGPHDSFYIFDEFYNLIKECK 374
>gi|289548622|ref|YP_003473610.1| carbamoyl-phosphate synthase, small subunit [Thermocrinis albus DSM
14484]
gi|289182239|gb|ADC89483.1| carbamoyl-phosphate synthase, small subunit [Thermocrinis albus DSM
14484]
Length = 373
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 51/89 (57%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV +++ GR+EI+AQNHN+AVDP +L K VE+THINL DGT G +
Sbjct: 281 KFGHHGSNHPVKDLRTGRIEITAQNHNFAVDPDSL-KDVEITHINLLDGTLEGFRHTKAP 339
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V +QYH EASPGP DS +F++FV++ +
Sbjct: 340 VYCVQYHPEASPGPHDSYSIFKEFVDMAR 368
>gi|406912265|gb|EKD51912.1| hypothetical protein ACD_62C00161G0002, partial [uncultured
bacterium]
Length = 206
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 69/94 (73%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGN PV N + G VEI++QNH +AVDP +LP GVEVTH++LND T +G+A+ L+
Sbjct: 110 KFGHHGGNQPVKNFKTGTVEITSQNHGFAVDPHSLPHGVEVTHVHLNDNTISGIAHAKLS 169
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EASPGP DS +F F +M++ R
Sbjct: 170 AFSVQYHPEASPGPHDSRYLFEQFCGMMRAHGLR 203
>gi|390957852|ref|YP_006421609.1| carbamoyl-phosphate synthase small subunit [Terriglobus roseus DSM
18391]
gi|390958193|ref|YP_006421950.1| carbamoyl-phosphate synthase small subunit [Terriglobus roseus DSM
18391]
gi|390412770|gb|AFL88274.1| carbamoyl-phosphate synthase small subunit [Terriglobus roseus DSM
18391]
gi|390413111|gb|AFL88615.1| carbamoyl-phosphate synthase small subunit [Terriglobus roseus DSM
18391]
Length = 379
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGHHG NHP+ N++ G+VEI++QNHNYAVDP TL V VTH NLNDGT AGL +
Sbjct: 286 KFGHHGANHPIKNLETGKVEITSQNHNYAVDPETLDDATVAVTHTNLNDGTVAGLKHKEH 345
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP DS +F+DF ++M K
Sbjct: 346 PMFSVQYHPEASPGPHDSHYLFKDFRKMMDEWK 378
>gi|85860897|ref|YP_463099.1| carbamoyl phosphate synthase small subunit [Syntrophus
aciditrophicus SB]
gi|85723988|gb|ABC78931.1| carbamoyl-phosphate synthase small chain [Syntrophus aciditrophicus
SB]
Length = 401
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 51/92 (55%), Positives = 67/92 (72%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG N PV + +GRVEI++QNH + V P +LP +E TH NLNDGT G+AYP+L
Sbjct: 302 KFGHHGINQPVKHRLSGRVEITSQNHGFVVVPESLPADLEKTHDNLNDGTSEGIAYPSLG 361
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EA+PGP D+ +F+ FV+L+ S K
Sbjct: 362 AFSVQYHPEAAPGPQDASYLFKQFVKLITSEK 393
>gi|302876838|ref|YP_003845471.1| carbamoyl-phosphate synthase small subunit [Clostridium
cellulovorans 743B]
gi|307687523|ref|ZP_07629969.1| carbamoyl-phosphate synthase, small subunit [Clostridium
cellulovorans 743B]
gi|302579695|gb|ADL53707.1| carbamoyl-phosphate synthase, small subunit [Clostridium
cellulovorans 743B]
Length = 361
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 49/93 (52%), Positives = 69/93 (74%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K+GH GGNHPV +I + +V I++QNH Y+VDP++LPK V++THINLNDGT GL+ +
Sbjct: 262 KYGHRGGNHPVQDIASKKVWITSQNHGYSVDPSSLPKNVKITHINLNDGTVEGLSCEEYS 321
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKY 93
S+Q+H EASPGP + + F DF+EL++ Y
Sbjct: 322 AFSVQFHPEASPGPKEGEEFFNDFIELIEKGAY 354
>gi|309792607|ref|ZP_07687068.1| carbamoyl-phosphate synthase, small subunit [Oscillochloris
trichoides DG-6]
gi|308225329|gb|EFO79096.1| carbamoyl-phosphate synthase, small subunit [Oscillochloris
trichoides DG6]
Length = 369
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/89 (56%), Positives = 64/89 (71%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGHHG NHPV +I GRVEI++QNH +AVDP +LP VE+THINLND T GL + L
Sbjct: 278 FGHHGVNHPVRHIPTGRVEITSQNHGFAVDPESLPSEVEITHINLNDQTVEGLRHAGLGC 337
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+QYH EA PGP D+ +F +F ++M +
Sbjct: 338 FSVQYHPEAGPGPHDASYLFHEFTQMMAA 366
>gi|409400881|ref|ZP_11250837.1| carbamoyl phosphate synthase small subunit [Acidocella sp. MX-AZ02]
gi|409130259|gb|EKN00044.1| carbamoyl phosphate synthase small subunit [Acidocella sp. MX-AZ02]
Length = 442
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/86 (58%), Positives = 66/86 (76%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G N PV ++++G+VEI++QNH +AVD +LP GVEVTH++L DG+ G+A PA V
Sbjct: 356 GHRGANQPVKDLRSGKVEITSQNHGFAVDEKSLPAGVEVTHVSLFDGSNEGIAAPAKKVF 415
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EASPGP DS +F+ FVELM
Sbjct: 416 SVQYHPEASPGPSDSAYLFKRFVELM 441
>gi|288930713|ref|YP_003434773.1| carbamoyl-phosphate synthase, small subunit [Ferroglobus placidus
DSM 10642]
gi|288892961|gb|ADC64498.1| carbamoyl-phosphate synthase, small subunit [Ferroglobus placidus
DSM 10642]
Length = 358
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/88 (56%), Positives = 64/88 (72%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV + + GRV IS+QNHN+AVD TLPKG+ VT INLND T G+ + +
Sbjct: 268 KFGHHGSNHPVKDFETGRVFISSQNHNFAVDEKTLPKGLRVTQINLNDYTVEGMVHEEIP 327
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
++S+QYH EA PGP D+ F FV+L+
Sbjct: 328 LISVQYHPEAGPGPHDTYFFFDSFVDLL 355
>gi|219849515|ref|YP_002463948.1| carbamoyl-phosphate synthase small subunit [Chloroflexus aggregans
DSM 9485]
gi|219543774|gb|ACL25512.1| carbamoyl-phosphate synthase, small subunit [Chloroflexus aggregans
DSM 9485]
Length = 374
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 64/91 (70%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGHHG NHPV + GRVEI++QNH +AVD +LP GVE+THINLND T G +YP L+
Sbjct: 283 FGHHGANHPVRYLPTGRVEITSQNHGFAVDLDSLPAGVELTHINLNDQTLEGFSYPELHC 342
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EA PGP D+ +F F +M + K
Sbjct: 343 FSVQYHPEAGPGPHDATYLFAQFTAMMAAAK 373
>gi|332295570|ref|YP_004437493.1| carbamoyl-phosphate synthase small subunit [Thermodesulfobium
narugense DSM 14796]
gi|332178673|gb|AEE14362.1| carbamoyl-phosphate synthase, small subunit [Thermodesulfobium
narugense DSM 14796]
Length = 372
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 52/90 (57%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGHHGGNHPV ++ G VEI++QNH +AVD ++ K EVTHINLND T G+ + L
Sbjct: 281 KFGHHGGNHPVKRLETGEVEITSQNHGFAVDYDSIDKSNWEVTHINLNDKTVEGIRHKKL 340
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+QYH EASPGP DS +F+ F ELMK
Sbjct: 341 PIFSVQYHPEASPGPHDSGYLFKQFCELMK 370
>gi|193214856|ref|YP_001996055.1| carbamoyl phosphate synthase small subunit [Chloroherpeton
thalassium ATCC 35110]
gi|193088333|gb|ACF13608.1| carbamoyl-phosphate synthase, small subunit [Chloroherpeton
thalassium ATCC 35110]
Length = 369
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 67/92 (72%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N+ G +EI+AQNH +AVDP ++P+ +E+TH+NL D T AG+ + L
Sbjct: 277 KFGHHGSNHPVKNLLTGSIEITAQNHGFAVDPNSMPENLELTHLNLYDNTVAGMRHKELP 336
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V +QYH EASPGP DS +F+ F+ +M+ K
Sbjct: 337 VFCVQYHPEASPGPHDSHYLFKQFIGMMEEAK 368
>gi|33519596|ref|NP_878428.1| carbamoyl phosphate synthase small subunit [Candidatus Blochmannia
floridanus]
gi|33517259|emb|CAD83643.1| carbamoyl-phosphate synthase small chain [Candidatus Blochmannia
floridanus]
Length = 382
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 52/94 (55%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ +V I++QNHN+ VD TLP ++VTHI+L DGT G+ Y +
Sbjct: 288 KFGHHGSNHPVKNVETNKVMITSQNHNFVVDIETLPNTMKVTHISLFDGTLQGIRYLDRS 347
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
V+S Q H EASPGP DS +F DF++L+K KYR
Sbjct: 348 VISFQGHPEASPGPHDSVSIFNDFIQLIK--KYR 379
>gi|163846443|ref|YP_001634487.1| carbamoyl-phosphate synthase small subunit [Chloroflexus
aurantiacus J-10-fl]
gi|163667732|gb|ABY34098.1| carbamoyl-phosphate synthase, small subunit [Chloroflexus
aurantiacus J-10-fl]
Length = 380
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 62/91 (68%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGHHG NHPV + GRVEI++QNH +AVDP +LP GV +THINLND T G YP L
Sbjct: 289 FGHHGANHPVRYLPTGRVEITSQNHGFAVDPDSLPAGVVLTHINLNDQTLEGFDYPELQC 348
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EA PGP D+ +F F E M + +
Sbjct: 349 FSVQYHPEAGPGPHDATYLFARFAEAMAARR 379
>gi|222524217|ref|YP_002568688.1| carbamoyl-phosphate synthase small subunit [Chloroflexus sp.
Y-400-fl]
gi|222448096|gb|ACM52362.1| carbamoyl-phosphate synthase, small subunit [Chloroflexus sp.
Y-400-fl]
Length = 374
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 62/91 (68%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGHHG NHPV + GRVEI++QNH +AVDP +LP GV +THINLND T G YP L
Sbjct: 283 FGHHGANHPVRYLPTGRVEITSQNHGFAVDPDSLPAGVVLTHINLNDQTLEGFDYPELQC 342
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EA PGP D+ +F F E M + +
Sbjct: 343 FSVQYHPEAGPGPHDATYLFARFAEAMAARR 373
>gi|300088015|ref|YP_003758537.1| carbamoyl-phosphate synthase small subunit [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527748|gb|ADJ26216.1| carbamoyl-phosphate synthase, small subunit [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 365
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV ++ +GRV I+AQNH YAVDPA++ G+EVTHINLNDGT G+ + L
Sbjct: 273 KFGHRGGNHPVKDLASGRVHITAQNHGYAVDPASIADSGLEVTHINLNDGTVEGMEHRDL 332
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V ++QYH EASPGP D+ +FR F+++ + +
Sbjct: 333 PVFTIQYHSEASPGPLDNLYLFRQFMDMTGAAR 365
>gi|261417316|ref|YP_003250999.1| carbamoyl-phosphate synthase small subunit [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|385789234|ref|YP_005820357.1| carbamoyl-phosphate synthetase, small subunit [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261373772|gb|ACX76517.1| carbamoyl-phosphate synthase, small subunit [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|302326290|gb|ADL25491.1| carbamoyl-phosphate synthetase, small subunit [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 376
Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 67/92 (72%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N+ G VEI++QNHNYA+D +LP VEVTHINLND T G+ +
Sbjct: 280 KFGHHGCNHPVKNLLTGAVEITSQNHNYAIDEKSLPADVEVTHINLNDNTVEGIRHKKFP 339
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH E++PGP+DS +F++F ++++ K
Sbjct: 340 AFSVQYHPESAPGPNDSMYLFKEFKKMIEDFK 371
>gi|319789218|ref|YP_004150851.1| carbamoyl-phosphate synthase, small subunit [Thermovibrio
ammonificans HB-1]
gi|317113720|gb|ADU96210.1| carbamoyl-phosphate synthase, small subunit [Thermovibrio
ammonificans HB-1]
Length = 379
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/88 (54%), Positives = 65/88 (73%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV N++ GRVEI+AQNH +AVD +TLP ++VTH +LNDGT GL +
Sbjct: 286 KFGHRGANQPVKNLKTGRVEITAQNHGFAVDESTLPDELQVTHYSLNDGTVEGLKHKTKP 345
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
+ ++QYH E+SPGP DS +FR+F +L+
Sbjct: 346 LFTVQYHPESSPGPHDSRYLFREFEKLI 373
>gi|94969221|ref|YP_591269.1| carbamoyl-phosphate synthase small subunit [Candidatus Koribacter
versatilis Ellin345]
gi|94551271|gb|ABF41195.1| carbamoyl-phosphate synthase small subunit [Candidatus Koribacter
versatilis Ellin345]
Length = 373
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGHHGGNHPV N G+VEI+A NHN+AVDP +L + VE+TH++LND T GL + +L
Sbjct: 279 KFGHHGGNHPVKNNTTGKVEITAHNHNFAVDPDSLKQSEVELTHVDLNDNTLEGLRHRSL 338
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP DS +F DFV++M K
Sbjct: 339 PLFSVQYHPEASPGPHDSHYLFGDFVKMMDEWK 371
>gi|222151021|ref|YP_002560175.1| carbamoyl phosphate synthase small subunit [Macrococcus
caseolyticus JCSC5402]
gi|222120144|dbj|BAH17479.1| carbamoyl-phosphate synthase small chain [Macrococcus caseolyticus
JCSC5402]
Length = 364
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ G++EI++QNH YAVDP ++ +E+TH LNDGT GL + +L
Sbjct: 266 KFGHRGANHPVKNLATGKIEITSQNHGYAVDPESIKNTDLEITHTALNDGTVEGLKHKSL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EASPGP D + +F F++LMK K R
Sbjct: 326 PAFSVQYHPEASPGPHDPNYLFDQFIDLMKENKER 360
>gi|406897258|gb|EKD41267.1| hypothetical protein ACD_73C00786G0002 [uncultured bacterium]
Length = 371
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 65/88 (73%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGN PV ++ +VEI+AQNH +A+D TLPKGV +TH NLND T G+A+ +L
Sbjct: 282 KFGHHGGNQPVMDLATRKVEITAQNHGFAIDDKTLPKGVMLTHTNLNDQTNEGIAHASLK 341
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EA+PGP DS +F F++LM
Sbjct: 342 AFSVQYHPEAAPGPHDSHYLFGQFIDLM 369
>gi|187735744|ref|YP_001877856.1| carbamoyl-phosphate synthase small subunit [Akkermansia muciniphila
ATCC BAA-835]
gi|226700899|sp|B2URJ0.1|CARA_AKKM8 RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|187425796|gb|ACD05075.1| carbamoyl-phosphate synthase, small subunit [Akkermansia
muciniphila ATCC BAA-835]
Length = 372
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 68/94 (72%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ G++ I++QNH +AVDP T+P VE+T INLND T G+A+ L
Sbjct: 276 KFGHRGANHPVKDLKTGKISITSQNHGFAVDPDTVPDDVEITLINLNDNTVEGIAHRTLP 335
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
V S+QYH EA+PGP D +FRDF +++ + K +
Sbjct: 336 VFSVQYHPEAAPGPRDPQYLFRDFRKMIAASKRQ 369
>gi|156743298|ref|YP_001433427.1| carbamoyl-phosphate synthase small subunit [Roseiflexus
castenholzii DSM 13941]
gi|156234626|gb|ABU59409.1| carbamoyl-phosphate synthase, small subunit [Roseiflexus
castenholzii DSM 13941]
Length = 386
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 63/91 (69%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGH GGN PV RVEIS+ NH +AVD ++LP+GVE+THINLNDG GL P
Sbjct: 288 FGHRGGNQPVRFSDTMRVEISSHNHGFAVDASSLPEGVEITHINLNDGCVEGLRAPDQRA 347
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EA+PGP D+ +FR FVELM+ +
Sbjct: 348 FSVQYHPEAAPGPHDARYLFRRFVELMEQAR 378
>gi|347755709|ref|YP_004863273.1| carbamoyl-phosphate synthase small subunit [Candidatus
Chloracidobacterium thermophilum B]
gi|347588227|gb|AEP12757.1| carbamoyl-phosphate synthase small subunit [Candidatus
Chloracidobacterium thermophilum B]
Length = 373
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/88 (54%), Positives = 63/88 (71%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K+GH G NHPV N+ G+VEI++QNH +AVDP +LP+ +EVTHINLNDGT G + L
Sbjct: 277 KYGHRGANHPVKNLTTGKVEITSQNHGFAVDPESLPEELEVTHINLNDGTLEGFRHRHLP 336
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
V +QYH EA+PGP D+ +F F L+
Sbjct: 337 VFCVQYHPEAAPGPHDAAYLFEAFTALL 364
>gi|159900755|ref|YP_001547002.1| carbamoyl-phosphate synthase small subunit [Herpetosiphon
aurantiacus DSM 785]
gi|159893794|gb|ABX06874.1| carbamoyl-phosphate synthase, small subunit [Herpetosiphon
aurantiacus DSM 785]
Length = 376
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/87 (55%), Positives = 62/87 (71%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGHH GNHPV + G+V I+AQNH +A+DPA+LP V+VT ++ ND TC GL + +L V
Sbjct: 285 FGHHAGNHPVCDTSTGKVRITAQNHGFALDPASLPSDVQVTEVSGNDQTCEGLQHKSLPV 344
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EA PGP D D FR F+ L+
Sbjct: 345 FSVQYHPEAGPGPHDGDEHFRRFISLV 371
>gi|320353054|ref|YP_004194393.1| carbamoyl-phosphate synthase small subunit [Desulfobulbus
propionicus DSM 2032]
gi|320121556|gb|ADW17102.1| carbamoyl-phosphate synthase small subunit [Desulfobulbus
propionicus DSM 2032]
Length = 370
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 46/89 (51%), Positives = 64/89 (71%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGN PV ++ G+VEI++QNH + VDP +LP VEVTHINLNDG+ G+ +
Sbjct: 279 KFGHRGGNQPVKDLLTGKVEITSQNHGFCVDPKSLPSSVEVTHINLNDGSLEGMRHREWP 338
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
S+QYH E +PGP D++ +F F++LM+
Sbjct: 339 AFSVQYHPEYAPGPHDAEYLFDRFIQLME 367
>gi|148658144|ref|YP_001278349.1| carbamoyl-phosphate synthase small subunit [Roseiflexus sp. RS-1]
gi|148570254|gb|ABQ92399.1| carbamoyl-phosphate synthase small subunit [Roseiflexus sp. RS-1]
Length = 386
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 62/93 (66%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGH GGN PV RVEIS+ NH +AVD ++LP GVE+TH+NLNDG GL P
Sbjct: 288 FGHRGGNQPVRFSDTMRVEISSHNHGFAVDASSLPDGVEITHVNLNDGCVEGLRAPDKQA 347
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA+PGP D+ +FR FVELM + R
Sbjct: 348 FSVQYHPEAAPGPHDARYLFRQFVELMAQARNR 380
>gi|310779986|ref|YP_003968318.1| carbamoyl-phosphate synthase small subunit [Ilyobacter polytropus
DSM 2926]
gi|309749309|gb|ADO83970.1| carbamoyl-phosphate synthase small subunit [Ilyobacter polytropus
DSM 2926]
Length = 350
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 47/86 (54%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K+GH GGNHPV ++Q ++ I+AQNH Y VD +P+GVEVTH+NLND + G+ L
Sbjct: 263 KYGHRGGNHPVKDLQKNKIFITAQNHGYVVD--KMPEGVEVTHVNLNDNSVEGMKSDELK 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
VMS+QYH EA PGP+DS +F DF++
Sbjct: 321 VMSIQYHPEACPGPEDSGYIFDDFLK 346
>gi|167630178|ref|YP_001680677.1| carbamoyl-phosphate synthase small subunit [Heliobacterium
modesticaldum Ice1]
gi|167592918|gb|ABZ84666.1| carbamoyl-phosphate synthase, small subunit [Heliobacterium
modesticaldum Ice1]
Length = 361
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 66/94 (70%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGH G NHPV ++ GRV I++QNH + +D ++P GV V+HIN+NDG+ GLA+ +
Sbjct: 268 FGHRGSNHPVKDLATGRVYITSQNHGFVIDGDSVPAGVIVSHINMNDGSVEGLAFTDMPA 327
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EA PGPDDS +F F++LMK + RA
Sbjct: 328 FSVQYHPEACPGPDDSGYLFDRFIDLMKQTEGRA 361
>gi|373852420|ref|ZP_09595220.1| carbamoyl-phosphate synthase, small subunit [Opitutaceae bacterium
TAV5]
gi|391229813|ref|ZP_10266019.1| carbamoyl-phosphate synthase, small subunit [Opitutaceae bacterium
TAV1]
gi|372474649|gb|EHP34659.1| carbamoyl-phosphate synthase, small subunit [Opitutaceae bacterium
TAV5]
gi|391219474|gb|EIP97894.1| carbamoyl-phosphate synthase, small subunit [Opitutaceae bacterium
TAV1]
Length = 390
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV NI+NG+V I+AQNH +A DP +L K G VT INLND T GL + L
Sbjct: 294 KFGHRGGNQPVKNIENGKVSITAQNHGFATDPKSLEKTGALVTEINLNDNTVEGLRHKEL 353
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V +QYH EA+PGP+D+D +F DF +L++ K
Sbjct: 354 PVFCVQYHPEAAPGPNDADPLFTDFYQLIEKRK 386
>gi|442321418|ref|YP_007361439.1| carbamoyl phosphate synthase small subunit [Myxococcus stipitatus
DSM 14675]
gi|441489060|gb|AGC45755.1| carbamoyl phosphate synthase small subunit [Myxococcus stipitatus
DSM 14675]
Length = 373
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 61/88 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGN PV ++ G+VEI+AQNH +AVD A+L VTHINLNDGT GLA P
Sbjct: 284 KFGHRGGNQPVKDLTTGKVEITAQNHGFAVDDASLKGKAVVTHINLNDGTVEGLAVPDAR 343
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EASPGP D+ +F F +LM
Sbjct: 344 AFSVQYHPEASPGPHDARYLFGRFAKLM 371
>gi|358054981|ref|ZP_09147509.1| carbamoyl phosphate synthase small subunit [Staphylococcus simiae
CCM 7213]
gi|357256715|gb|EHJ07047.1| carbamoyl phosphate synthase small subunit [Staphylococcus simiae
CCM 7213]
Length = 366
Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV ++Q+G+V+I++QNH YA+D A+L +EVTHI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKHLQSGKVDITSQNHGYAIDKASLENTDLEVTHIALNDGTVEGLRHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EA+PGP DS+ +F DFV +M + K +
Sbjct: 326 PAFSVQYHPEANPGPTDSNYLFDDFVTMMNNAKEKG 361
>gi|383456507|ref|YP_005370496.1| carbamoyl phosphate synthase small subunit [Corallococcus
coralloides DSM 2259]
gi|380732257|gb|AFE08259.1| carbamoyl phosphate synthase small subunit [Corallococcus
coralloides DSM 2259]
Length = 375
Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 60/88 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGN PV ++ G+VEI+AQNH +AVD A+L VTHINLNDGT GLA P
Sbjct: 285 KFGHRGGNQPVKDLTTGKVEITAQNHGFAVDDASLKGKAVVTHINLNDGTVEGLAVPDAR 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EASPGP D+ +F F LM
Sbjct: 345 AFSVQYHPEASPGPHDARYLFSRFATLM 372
>gi|171910868|ref|ZP_02926338.1| carbamoyl-phosphate synthetase, glutamine (small subunit)
[Verrucomicrobium spinosum DSM 4136]
Length = 389
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 65/92 (70%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGN PV ++++G+V I++QNH +AVD +LP VEVTH+NLND T GL +
Sbjct: 296 KFGHRGGNQPVKDLRSGKVSITSQNHGFAVDGESLPSNVEVTHLNLNDQTVEGLRHKEWP 355
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+QYH EA+PGP+D+ FR+F L+ K
Sbjct: 356 VFSVQYHPEAAPGPNDASYFFREFATLIDQTK 387
>gi|319957672|ref|YP_004168935.1| carbamoyl-phosphate synthase small subunit [Nitratifractor
salsuginis DSM 16511]
gi|319420076|gb|ADV47186.1| carbamoyl-phosphate synthase small subunit [Nitratifractor
salsuginis DSM 16511]
Length = 372
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 50/88 (56%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N++ G VEI+AQNHNY V P +L + EVTH+NL D T G+ Y
Sbjct: 286 KFGHHGGNHPVKNVEKGTVEITAQNHNYNV-PESLTEVAEVTHVNLFDNTIEGVRYKEEP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
VMS+Q+H EASPGP +S +F++F E++
Sbjct: 345 VMSVQHHPEASPGPHESAYIFKEFYEML 372
>gi|338534744|ref|YP_004668078.1| carbamoyl phosphate synthase small subunit [Myxococcus fulvus HW-1]
gi|337260840|gb|AEI67000.1| carbamoyl phosphate synthase small subunit [Myxococcus fulvus HW-1]
Length = 374
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 61/88 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGN PV ++ G+VEI+AQNH +AVD A+L VTHINLNDGT GLA P
Sbjct: 285 KFGHRGGNQPVKDLTTGKVEITAQNHGFAVDDASLKGLAVVTHINLNDGTVEGLAVPDAR 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EASPGP D+ +F F +LM
Sbjct: 345 AFSVQYHPEASPGPHDARYLFGRFAKLM 372
>gi|196228616|ref|ZP_03127482.1| carbamoyl-phosphate synthase, small subunit [Chthoniobacter flavus
Ellin428]
gi|196226897|gb|EDY21401.1| carbamoyl-phosphate synthase, small subunit [Chthoniobacter flavus
Ellin428]
Length = 359
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 67/90 (74%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGN PV ++ G+V I++QNH +AVD +LP VEV+HINLND T GL + +L
Sbjct: 265 KFGHRGGNQPVQDVATGKVTITSQNHGFAVDADSLPGEVEVSHINLNDHTVEGLRHKSLP 324
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
+ S+QYH EA+PGP+D+ FR+F +L+++
Sbjct: 325 IFSVQYHPEAAPGPNDAGYFFREFAKLIET 354
>gi|405375681|ref|ZP_11029707.1| Carbamoyl-phosphate synthase small chain [Chondromyces apiculatus
DSM 436]
gi|397086045|gb|EJJ17189.1| Carbamoyl-phosphate synthase small chain [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 375
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 61/88 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGN PV ++ G+VEI+AQNH +AVD A+L VTHINLNDGT GLA P
Sbjct: 286 KFGHRGGNQPVKDLTTGKVEITAQNHGFAVDDASLKGLAVVTHINLNDGTVEGLAVPDAR 345
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EASPGP D+ +F F +LM
Sbjct: 346 AFSVQYHPEASPGPHDARYLFGRFAKLM 373
>gi|108762105|ref|YP_631706.1| carbamoyl phosphate synthase small subunit [Myxococcus xanthus DK
1622]
gi|108465985|gb|ABF91170.1| carbamoyl-phosphate synthase, small subunit [Myxococcus xanthus DK
1622]
Length = 374
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 61/88 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGN PV ++ G+VEI+AQNH +AVD A+L VTHINLNDGT GLA P
Sbjct: 285 KFGHRGGNQPVKDLTTGKVEITAQNHGFAVDDASLKGLAVVTHINLNDGTVEGLAVPDAR 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EASPGP D+ +F F +LM
Sbjct: 345 AFSVQYHPEASPGPHDARYLFDRFAKLM 372
>gi|403383404|ref|ZP_10925461.1| carbamoylphosphate synthase small subunit [Kurthia sp. JC30]
Length = 366
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ GR E+++QNH YAVD +L +EVTH+ LNDGTC GL +
Sbjct: 267 KFGHRGANHPVKDLRTGRTELTSQNHGYAVDMDSLEDTDLEVTHVALNDGTCEGLRHKTA 326
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
N ++QYH EASPGP+D + +F +F+ELM + +
Sbjct: 327 NAFTVQYHPEASPGPEDPNHLFDEFIELMNNTR 359
>gi|422343836|ref|ZP_16424763.1| carbamoyl-phosphate synthase, small subunit [Selenomonas noxia
F0398]
gi|355378252|gb|EHG25443.1| carbamoyl-phosphate synthase, small subunit [Selenomonas noxia
F0398]
Length = 358
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV N++ G+V ISAQNH YAVDPA+L K + VTH+N+ND T GL + +L
Sbjct: 267 KFGHRGGNQPVKNLKMGKVHISAQNHGYAVDPASLEKTPLIVTHLNVNDNTIEGLRHTSL 326
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+QYH EA+PGPDD+ +F +F LMK
Sbjct: 327 PIFSVQYHPEAAPGPDDNMYLFDEFWNLMK 356
>gi|292670822|ref|ZP_06604248.1| carbamoyl-phosphate synthase [Selenomonas noxia ATCC 43541]
gi|292647443|gb|EFF65415.1| carbamoyl-phosphate synthase [Selenomonas noxia ATCC 43541]
Length = 357
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV N++ G+V ISAQNH YAVDPA+L K + VTH+N+ND T GL + +L
Sbjct: 266 KFGHRGGNQPVKNLKMGKVHISAQNHGYAVDPASLEKTPLIVTHLNVNDNTIEGLRHTSL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+QYH EA+PGPDD+ +F +F LMK
Sbjct: 326 PIFSVQYHPEAAPGPDDNMYLFDEFWNLMK 355
>gi|297566750|ref|YP_003685722.1| carbamoyl-phosphate synthase small subunit [Meiothermus silvanus
DSM 9946]
gi|296851199|gb|ADH64214.1| carbamoyl-phosphate synthase, small subunit [Meiothermus silvanus
DSM 9946]
Length = 388
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV N+ G+VEI++QNH YAVDP +L K + THINLNDGT G+A+
Sbjct: 281 KFGHRGANHPVKNLLTGKVEITSQNHGYAVDPDSL-KEFKPTHINLNDGTLEGMAHVRYP 339
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
V S+QYH EASPGP DS +FR F+E ++S
Sbjct: 340 VFSVQYHPEASPGPHDSIYLFRRFLEEVES 369
>gi|338983179|ref|ZP_08632404.1| Carbamoyl phosphate synthase small subunit [Acidiphilium sp. PM]
gi|338207888|gb|EGO95800.1| Carbamoyl phosphate synthase small subunit [Acidiphilium sp. PM]
Length = 476
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/87 (55%), Positives = 63/87 (72%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G N PV + G+VEI++QNH +AVD A+LP GV VTH +L DG+ G+A PA N
Sbjct: 389 GHRGANQPVQELATGKVEITSQNHGFAVDEASLPDGVTVTHRSLFDGSNEGIACPAKNCF 448
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMK 89
S+QYH EASPGP D++ +FR FV +M+
Sbjct: 449 SVQYHPEASPGPSDANHLFRRFVAMME 475
>gi|326403123|ref|YP_004283204.1| carbamoyl-phosphate synthase small subunit [Acidiphilium multivorum
AIU301]
gi|325049984|dbj|BAJ80322.1| carbamoyl-phosphate synthase small subunit [Acidiphilium multivorum
AIU301]
Length = 447
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/87 (55%), Positives = 63/87 (72%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G N PV + G+VEI++QNH +AVD A+LP GV VTH +L DG+ G+A PA N
Sbjct: 360 GHRGANQPVQELATGKVEITSQNHGFAVDEASLPDGVTVTHRSLFDGSNEGIACPAKNCF 419
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMK 89
S+QYH EASPGP D++ +FR FV +M+
Sbjct: 420 SVQYHPEASPGPSDANHLFRRFVAMME 446
>gi|392375188|ref|YP_003207021.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Candidatus Methylomirabilis oxyfera]
gi|258592881|emb|CBE69190.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Candidatus Methylomirabilis oxyfera]
Length = 399
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGHHGGN PV ++ G+VEI+ QNH +AVD A++P +E+THINLND T G+ + L
Sbjct: 304 KFGHHGGNQPVKDLTTGKVEITTQNHGFAVDIASIPDSEIELTHINLNDHTVEGMRHRRL 363
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
+ S+QYH EASPGP D+ +F+ FVELM
Sbjct: 364 PIFSVQYHPEASPGPHDASYLFQRFVELM 392
>gi|148259923|ref|YP_001234050.1| carbamoyl phosphate synthase small subunit [Acidiphilium cryptum
JF-5]
gi|146401604|gb|ABQ30131.1| carbamoyl-phosphate synthase small subunit [Acidiphilium cryptum
JF-5]
Length = 447
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 48/87 (55%), Positives = 63/87 (72%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G N PV + G+VEI++QNH +AVD A+LP GV VTH +L DG+ G+A PA N
Sbjct: 360 GHRGANQPVQELATGKVEITSQNHGFAVDEASLPDGVTVTHRSLFDGSNEGIACPAKNCF 419
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMK 89
S+QYH EASPGP D++ +FR FV +M+
Sbjct: 420 SVQYHPEASPGPSDANHLFRRFVAMME 446
>gi|325295577|ref|YP_004282091.1| carbamoyl-phosphate synthase small subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325066025|gb|ADY74032.1| carbamoyl-phosphate synthase, small subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 379
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/94 (50%), Positives = 66/94 (70%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV N + G+VEI+AQNH +AVD +T+P +EVTH +LNDGT GL +
Sbjct: 286 KFGHRGANQPVKNKKTGKVEITAQNHGFAVDESTIPDDLEVTHYSLNDGTVEGLKHKTKP 345
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
+ ++QYH E+SPGP DS +F++F +L+ + R
Sbjct: 346 LFTVQYHPESSPGPHDSRYLFKEFEKLISDYRGR 379
>gi|228475018|ref|ZP_04059746.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus hominis
SK119]
gi|418620536|ref|ZP_13183340.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus hominis
VCU122]
gi|228271003|gb|EEK12391.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus hominis
SK119]
gi|374822666|gb|EHR86686.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus hominis
VCU122]
Length = 368
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G+V+I++QNH YA+D +L G+EVTHI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKDLRTGKVDITSQNHGYAIDKDSLKNTGLEVTHIALNDGTVEGLRHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EA PGP DS+ +F +F+++M+ K
Sbjct: 326 PAFSVQYHPEARPGPSDSNYLFDEFLDMMRDFK 358
>gi|389549052|gb|AFK83716.1| CspS [uncultured organism]
Length = 373
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/91 (51%), Positives = 65/91 (71%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGH GGN PV +++G VEI++ NH +AV+ +LP VEVTHINLND G+ + L V
Sbjct: 275 FGHRGGNQPVQELEDGSVEITSHNHGFAVEADSLPADVEVTHINLNDRCVEGMRHTKLPV 334
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+S+QYH EA+PGP D+D F+ F++LM S +
Sbjct: 335 ISVQYHPEAAPGPHDADHHFKRFIDLMVSAR 365
>gi|416847409|ref|ZP_11907131.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
O46]
gi|323442293|gb|EGA99923.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
O46]
Length = 366
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 68/95 (71%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH YA+D +L +EVTH+ LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSLKSTDLEVTHLALNDGTVEGLKHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
+ S+QYH EA+PGP DS+ +F DFV +M + K +
Sbjct: 326 SAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK 360
>gi|229463797|gb|ACQ66324.1| carbamoyl phosphate synthetase A [Populus maximowiczii x Populus
nigra]
Length = 281
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 52/56 (92%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAY 56
KFGHHGGNHPV N+ RVEISAQNHNYAVDPA+LPKGVEVTHINLNDG+CAGLA+
Sbjct: 226 KFGHHGGNHPVRNLVANRVEISAQNHNYAVDPASLPKGVEVTHINLNDGSCAGLAF 281
>gi|313895747|ref|ZP_07829303.1| carbamoyl-phosphate synthase, small subunit [Selenomonas sp. oral
taxon 137 str. F0430]
gi|312975873|gb|EFR41332.1| carbamoyl-phosphate synthase, small subunit [Selenomonas sp. oral
taxon 137 str. F0430]
Length = 357
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV + G+V ISAQNH YAVDPA+L +EVTHIN+ND T GL + +L
Sbjct: 266 KFGHRGGNQPVKTLTTGQVHISAQNHGYAVDPASLAGTPLEVTHINVNDETIEGLRHTSL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSV 91
+ S+QYH EA+PGPDD+ +F F +LMK V
Sbjct: 326 PIFSVQYHPEAAPGPDDNMYLFDTFWDLMKGV 357
>gi|402303195|ref|ZP_10822292.1| carbamoyl-phosphate synthase, small subunit [Selenomonas sp.
FOBRC9]
gi|400379130|gb|EJP31978.1| carbamoyl-phosphate synthase, small subunit [Selenomonas sp.
FOBRC9]
Length = 357
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV + G+V ISAQNH YAVDPA+L +EVTHIN+ND T GL + +L
Sbjct: 266 KFGHRGGNQPVKTLTTGQVHISAQNHGYAVDPASLAGTPLEVTHINVNDETIEGLRHTSL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSV 91
+ S+QYH EA+PGPDD+ +F F +LMK V
Sbjct: 326 PIFSVQYHPEAAPGPDDNMYLFDTFWDLMKGV 357
>gi|114317124|gb|ABI63184.1| carbamoyl-phosphate synthase small chain [Granulibacter
bethesdensis CGDNIH1]
Length = 478
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 63/89 (70%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
GH G N PV + GRVEI++QNH +AVD ++LP GVEVTH++L DG+ G+A P+
Sbjct: 390 LGHRGANQPVKELATGRVEITSQNHGFAVDASSLPAGVEVTHVSLFDGSNEGIAAPSKRC 449
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+QYH EASPGP DS +F FV+++ S
Sbjct: 450 FSVQYHPEASPGPSDSHHLFHRFVDMLGS 478
>gi|406664675|ref|ZP_11072450.1| Carbamoyl-phosphate synthase small chain [Bacillus isronensis
B3W22]
gi|405387523|gb|EKB46947.1| Carbamoyl-phosphate synthase small chain [Bacillus isronensis
B3W22]
Length = 366
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPALN 60
FGH GGNHPV N++ GR ++++QNH YA+D +L +E+TH+ LNDGTC G+ +
Sbjct: 268 FGHRGGNHPVKNLRTGRTDLTSQNHGYAIDIESLKDTDLELTHVALNDGTCEGVRHKNYP 327
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ ++QYH EASPGP+DS+ +F +F+E+M+
Sbjct: 328 IFTVQYHPEASPGPEDSNYLFDEFIEMME 356
>gi|393201800|ref|YP_006463642.1| carbamoylphosphate synthase small subunit [Solibacillus silvestris
StLB046]
gi|327441131|dbj|BAK17496.1| carbamoylphosphate synthase small subunit [Solibacillus silvestris
StLB046]
Length = 366
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPALN 60
FGH GGNHPV N++ GR ++++QNH YA+D +L +E+TH+ LNDGTC G+ +
Sbjct: 268 FGHRGGNHPVKNLRTGRTDLTSQNHGYAIDIESLKDTDLELTHVALNDGTCEGVRHKNYP 327
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ ++QYH EASPGP+DS+ +F +F+E+M+
Sbjct: 328 IFTVQYHPEASPGPEDSNYLFDEFIEMME 356
>gi|406980653|gb|EKE02226.1| hypothetical protein ACD_20C00410G0012 [uncultured bacterium]
Length = 357
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 45/88 (51%), Positives = 64/88 (72%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ +V I+AQNH YAV +LP+ +VTHIN+ND T G + PAL
Sbjct: 263 KFGHRGSNHPVQDLRTNKVIITAQNHGYAVHADSLPENCQVTHININDRTVEGFSCPALK 322
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
+ ++Q+H EA PGP D++ +F D+VEL+
Sbjct: 323 INTVQFHPEAGPGPRDANYIFGDWVELL 350
>gi|82750807|ref|YP_416548.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
RF122]
gi|82656338|emb|CAI80755.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
RF122]
Length = 366
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 68/95 (71%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH YA+D +L + +E+TH+ LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSLKRTDLEITHLALNDGTVEGLKHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA+PGP DS+ +F DFV +M + K +
Sbjct: 326 PAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK 360
>gi|383762630|ref|YP_005441612.1| carbamoyl-phosphate synthase small subunit [Caldilinea aerophila
DSM 14535 = NBRC 104270]
gi|381382898|dbj|BAL99714.1| carbamoyl-phosphate synthase small chain [Caldilinea aerophila DSM
14535 = NBRC 104270]
Length = 382
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 60/89 (67%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGN PV +I V+I+AQNHNYAVD TLP VTH NLNDGT GL
Sbjct: 290 KFGHHGGNQPVSDIDATNVQITAQNHNYAVDEETLPPNAIVTHRNLNDGTVEGLRLTDRP 349
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V +QYH EASPGP D+D +F F E++K
Sbjct: 350 VFCVQYHPEASPGPHDADLLFARFAEMVK 378
>gi|417000918|ref|ZP_11940912.1| carbamoyl-phosphate synthase, small subunit [Veillonella parvula
ACS-068-V-Sch12]
gi|333975792|gb|EGL76669.1| carbamoyl-phosphate synthase, small subunit [Veillonella parvula
ACS-068-V-Sch12]
Length = 355
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 67/92 (72%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ GRV I++QNH+YAVD +LP VE+TH ++NDGT G+ + L
Sbjct: 264 KFGHRGSNHPVQDLRTGRVYITSQNHSYAVDDTSLPAFVEITHRSVNDGTVEGMRHKELP 323
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP D+ +F +F +LM+ K
Sbjct: 324 IFSVQYHPEASPGPTDNLYLFDEFEDLMRKGK 355
>gi|11498872|ref|NP_070101.1| carbamoyl phosphate synthase small subunit [Archaeoglobus fulgidus
DSM 4304]
gi|21759013|sp|O28995.1|CARA_ARCFU RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|2649306|gb|AAB89971.1| carbamoyl-phosphate synthase, small (or glutamine) subunit (carA)
[Archaeoglobus fulgidus DSM 4304]
Length = 358
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 63/92 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG N PV + + GRV IS+QNHN+AVD TLPK EVT INLND T G+ +
Sbjct: 267 KFGHHGSNQPVKDFETGRVFISSQNHNFAVDTKTLPKEFEVTQINLNDHTVEGMVHKDFP 326
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
++++QYH EA PGP D+ F +V++++ +
Sbjct: 327 LITVQYHPEAGPGPHDTYFFFDRYVDMLREYR 358
>gi|291277373|ref|YP_003517145.1| carbamoyl-phosphate synthase small subunit [Helicobacter mustelae
12198]
gi|290964567|emb|CBG40420.1| carbamoyl-phosphate synthase small chain [Helicobacter mustelae
12198]
Length = 373
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 47/88 (53%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N+Q G VEI++QNHNY+V P ++ + E+TH NL DGT G+AY
Sbjct: 286 KFGHHGGNHPVKNMQTGEVEITSQNHNYSV-PESIKEVAEITHRNLFDGTIEGIAYRDAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
+ S+QYH E+SPGP ++ +F F +M
Sbjct: 345 IFSVQYHPESSPGPKEARKLFLKFANMM 372
>gi|260892279|ref|YP_003238376.1| carbamoyl-phosphate synthase small subunit [Ammonifex degensii KC4]
gi|260864420|gb|ACX51526.1| carbamoyl-phosphate synthase, small subunit [Ammonifex degensii
KC4]
Length = 359
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 46/89 (51%), Positives = 64/89 (71%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ GRV I++ NH +AVDPA+LP +EV++I+LNDGT GL + L
Sbjct: 266 KFGHHGINHPVKDLATGRVFITSHNHGFAVDPASLPPELEVSYISLNDGTVEGLRHKFLP 325
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
S+Q+H E PGP D+ +F F+EL++
Sbjct: 326 FFSVQFHPEGGPGPQDAAFIFDRFLELLQ 354
>gi|379795567|ref|YP_005325565.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus MSHR1132]
gi|356872557|emb|CCE58896.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus MSHR1132]
Length = 366
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 68/95 (71%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH YA+D +L +E+THI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKNLETGKVDITSQNHGYAIDKDSLKNTELEITHIALNDGTVEGLKHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA+PGP DS+ +F +FV++M + K +
Sbjct: 326 PAFSVQYHPEANPGPSDSNYLFDEFVKMMTNFKEK 360
>gi|92118370|ref|YP_578099.1| carbamoyl phosphate synthase small subunit [Nitrobacter
hamburgensis X14]
gi|91801264|gb|ABE63639.1| carbamoyl-phosphate synthase small subunit [Nitrobacter
hamburgensis X14]
Length = 396
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 49/90 (54%), Positives = 62/90 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI++ NH +AVD ATLPKG + THI+L DG+ G+ V
Sbjct: 305 GHHGANHPVRDETTGKVEITSMNHGFAVDEATLPKGAKQTHISLFDGSNCGIELEGKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F+ F ELM+ K
Sbjct: 365 SVQYHPEASPGPRDSHYLFKRFAELMRENK 394
>gi|220931136|ref|YP_002508044.1| carbamoyl-phosphate synthase small subunit [Halothermothrix orenii
H 168]
gi|219992446|gb|ACL69049.1| carbamoyl-phosphate synthase, small subunit [Halothermothrix orenii
H 168]
Length = 364
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 48/85 (56%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ G+V I+ QNH YA++ LP +EVTHINLNDGT G+ + L
Sbjct: 266 KFGHHGGNHPVKDLRTGKVLITTQNHGYALEDG-LPPEIEVTHINLNDGTIEGIKHKDLP 324
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFV 85
V S+QYH EA PGP DS +F +F+
Sbjct: 325 VSSVQYHPEAGPGPKDSTLLFNEFI 349
>gi|418900609|ref|ZP_13454666.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1214]
gi|377703077|gb|EHT27393.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1214]
Length = 366
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH YA+D +L +EVTH+ LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSLKSTDLEVTHLALNDGTVEGLKHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA+PGP DS+ +F DFV +M + K +
Sbjct: 326 PAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK 360
>gi|182413732|ref|YP_001818798.1| carbamoyl-phosphate synthase small subunit [Opitutus terrae PB90-1]
gi|177840946|gb|ACB75198.1| carbamoyl-phosphate synthase, small subunit [Opitutus terrae
PB90-1]
Length = 390
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV N++ G+V I+AQNH +A DP ++ +G +VT INLND T GL + +L
Sbjct: 294 KFGHRGGNQPVKNLETGKVSITAQNHGFATDPKSIEQRGAKVTEINLNDQTVEGLRHTSL 353
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+QYH EA+PGP+D+D +F DF L+ + K
Sbjct: 354 PVFSVQYHPEAAPGPNDADPLFIDFYNLVAARK 386
>gi|283770263|ref|ZP_06343155.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus H19]
gi|283460410|gb|EFC07500.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus H19]
Length = 366
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH YA+D +L +EVTH+ LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSLKSTDLEVTHLALNDGTVEGLKHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA+PGP DS+ +F DFV +M + K +
Sbjct: 326 PAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK 360
>gi|386728880|ref|YP_006195263.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus 71193]
gi|418978557|ref|ZP_13526357.1| Carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus DR10]
gi|379993381|gb|EIA14827.1| Carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus DR10]
gi|384230173|gb|AFH69420.1| Carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus 71193]
Length = 378
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH YA+D +L +EVTH+ LNDGT GL + L
Sbjct: 278 KFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSLKSTDLEVTHLALNDGTVEGLKHKTL 337
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA+PGP DS+ +F DFV +M + K +
Sbjct: 338 PAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK 372
>gi|253733560|ref|ZP_04867725.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus TCH130]
gi|253728614|gb|EES97343.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus TCH130]
Length = 366
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH YA+D +L +EVTH+ LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSLKSTDLEVTHLALNDGTVEGLKHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA+PGP DS+ +F DFV +M + K +
Sbjct: 326 PAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK 360
>gi|269202816|ref|YP_003282085.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus ED98]
gi|262075106|gb|ACY11079.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus ED98]
Length = 366
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH YA+D +L +EVTH+ LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSLKSTDLEVTHLALNDGTVEGLKHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA+PGP DS+ +F DFV +M + K +
Sbjct: 326 PAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK 360
>gi|387602474|ref|YP_005733995.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus ST398]
gi|404478540|ref|YP_006709970.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
08BA02176]
gi|418309753|ref|ZP_12921304.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21331]
gi|283470412|emb|CAQ49623.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus ST398]
gi|365237876|gb|EHM78715.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21331]
gi|404440029|gb|AFR73222.1| putative carbamoyl-phosphate synthase, pyrimidine-specific, small
chain [Staphylococcus aureus 08BA02176]
Length = 366
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH YA+D +L +EVTH+ LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSLKSTDLEVTHLALNDGTVEGLKHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA+PGP DS+ +F DFV +M + K +
Sbjct: 326 PAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK 360
>gi|87310506|ref|ZP_01092635.1| carbamoyl-phosphate synthase, small chain [Blastopirellula marina
DSM 3645]
gi|87286727|gb|EAQ78632.1| carbamoyl-phosphate synthase, small chain [Blastopirellula marina
DSM 3645]
Length = 381
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 48/92 (52%), Positives = 63/92 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV ++ G+VEI++QNH +AVD A+LP +EVTH NLND T AG+ + L
Sbjct: 289 KFGHRGANQPVLDVTTGKVEITSQNHGFAVDEASLPDCLEVTHRNLNDNTVAGVRHKTLQ 348
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EAS GP DS+ +F F E++ K
Sbjct: 349 AFSVQYHPEASAGPHDSEYLFERFREMVDGQK 380
>gi|15924192|ref|NP_371726.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus Mu50]
gi|15926785|ref|NP_374318.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus N315]
gi|21282814|ref|NP_645902.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus MW2]
gi|49486041|ref|YP_043262.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus MSSA476]
gi|57651771|ref|YP_186077.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus COL]
gi|87162090|ref|YP_493792.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus USA300_FPR3757]
gi|88194908|ref|YP_499708.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|148267693|ref|YP_001246636.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus JH9]
gi|150393751|ref|YP_001316426.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus JH1]
gi|151221325|ref|YP_001332147.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus str. Newman]
gi|156979523|ref|YP_001441782.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus Mu3]
gi|161509375|ref|YP_001575034.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|221141992|ref|ZP_03566485.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus str. JKD6009]
gi|253315560|ref|ZP_04838773.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus str. CF-Marseille]
gi|253731819|ref|ZP_04865984.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|255005989|ref|ZP_05144590.2| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus Mu50-omega]
gi|257795742|ref|ZP_05644721.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
A9781]
gi|258415966|ref|ZP_05682236.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
A9763]
gi|258419713|ref|ZP_05682680.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
A9719]
gi|258438755|ref|ZP_05689908.1| predicted protein [Staphylococcus aureus A9299]
gi|258444539|ref|ZP_05692868.1| predicted protein [Staphylococcus aureus A8115]
gi|258447628|ref|ZP_05695772.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
A6300]
gi|258449470|ref|ZP_05697573.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
A6224]
gi|258452499|ref|ZP_05700505.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
A5948]
gi|258454849|ref|ZP_05702813.1| aspartate carbamoyltransferase [Staphylococcus aureus A5937]
gi|262048105|ref|ZP_06020992.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
D30]
gi|262051837|ref|ZP_06024053.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
930918-3]
gi|282892688|ref|ZP_06300923.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
A8117]
gi|282910774|ref|ZP_06318577.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282916451|ref|ZP_06324213.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus D139]
gi|282918899|ref|ZP_06326634.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus C427]
gi|282919984|ref|ZP_06327713.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
A9765]
gi|282927542|ref|ZP_06335158.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
A10102]
gi|284024126|ref|ZP_06378524.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus 132]
gi|294848195|ref|ZP_06788942.1| carbamoyl-phosphate synthase [Staphylococcus aureus A9754]
gi|295407140|ref|ZP_06816941.1| carbamoyl-phosphate synthase [Staphylococcus aureus A8819]
gi|296275223|ref|ZP_06857730.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus MR1]
gi|297208154|ref|ZP_06924585.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|297245974|ref|ZP_06929833.1| carbamoyl-phosphate synthase [Staphylococcus aureus A8796]
gi|300912234|ref|ZP_07129677.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus TCH70]
gi|304381235|ref|ZP_07363888.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|379014393|ref|YP_005290629.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus VC40]
gi|379020909|ref|YP_005297571.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus M013]
gi|384861795|ref|YP_005744515.1| putative carbamoyl-phosphate synthase, pyrimidine-specific, small
chain [Staphylococcus aureus subsp. aureus str. JKD6008]
gi|384864428|ref|YP_005749787.1| carbamoyl-phosphate synthase pyrimidine-specific small chain
(Carbamoyl-phosphate synthetase glutamine chain)
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|384867916|ref|YP_005748112.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus TCH60]
gi|384869735|ref|YP_005752449.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus T0131]
gi|385781429|ref|YP_005757600.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus 11819-97]
gi|386830737|ref|YP_006237391.1| putative carbamoyl-phosphate synthase, pyrimidine-specific, small
chain [Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|387142811|ref|YP_005731204.1| putative carbamoyl-phosphate synthase,pyrimidine-specific, small
chain [Staphylococcus aureus subsp. aureus TW20]
gi|387150345|ref|YP_005741909.1| Carbamoyl-phosphate synthase small chain [Staphylococcus aureus
04-02981]
gi|387780311|ref|YP_005755109.1| putative carbamoyl-phosphate synthase,pyrimidine-specific, small
chain [Staphylococcus aureus subsp. aureus LGA251]
gi|415686389|ref|ZP_11450478.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus CGS01]
gi|415691049|ref|ZP_11453288.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus CGS03]
gi|416839245|ref|ZP_11902639.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
O11]
gi|417650097|ref|ZP_12299874.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21189]
gi|417655607|ref|ZP_12305317.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21193]
gi|417797234|ref|ZP_12444432.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21305]
gi|417797858|ref|ZP_12445044.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21310]
gi|417800997|ref|ZP_12448099.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21318]
gi|417887070|ref|ZP_12531209.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21195]
gi|417891872|ref|ZP_12535929.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21200]
gi|417892185|ref|ZP_12536239.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21201]
gi|417896105|ref|ZP_12540072.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21235]
gi|417899972|ref|ZP_12543871.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21259]
gi|417901888|ref|ZP_12545764.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21266]
gi|417904099|ref|ZP_12547929.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21269]
gi|418280873|ref|ZP_12893695.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21178]
gi|418286430|ref|ZP_12899076.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21209]
gi|418307617|ref|ZP_12919307.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21194]
gi|418312646|ref|ZP_12924155.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21334]
gi|418316128|ref|ZP_12927572.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21340]
gi|418317675|ref|ZP_12929091.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21232]
gi|418321715|ref|ZP_12933054.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus VCU006]
gi|418424342|ref|ZP_12997464.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus VRS1]
gi|418427337|ref|ZP_13000349.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus VRS2]
gi|418430178|ref|ZP_13003094.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus VRS3a]
gi|418433139|ref|ZP_13005919.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus VRS4]
gi|418436814|ref|ZP_13008616.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus VRS5]
gi|418439685|ref|ZP_13011393.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus VRS6]
gi|418442738|ref|ZP_13014340.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus VRS7]
gi|418445797|ref|ZP_13017273.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus VRS8]
gi|418448741|ref|ZP_13020133.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus VRS9]
gi|418451565|ref|ZP_13022899.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus VRS10]
gi|418454621|ref|ZP_13025883.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus VRS11a]
gi|418457497|ref|ZP_13028700.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus VRS11b]
gi|418559309|ref|ZP_13123855.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21252]
gi|418561398|ref|ZP_13125889.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21262]
gi|418569021|ref|ZP_13133361.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21272]
gi|418570750|ref|ZP_13135011.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21283]
gi|418572159|ref|ZP_13136371.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21333]
gi|418579032|ref|ZP_13143127.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1114]
gi|418598344|ref|ZP_13161854.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21343]
gi|418638162|ref|ZP_13200465.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-3]
gi|418642882|ref|ZP_13205068.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-24]
gi|418647535|ref|ZP_13209598.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-88]
gi|418649487|ref|ZP_13211515.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-91]
gi|418654790|ref|ZP_13216686.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-99]
gi|418655146|ref|ZP_13217023.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-105]
gi|418658913|ref|ZP_13220610.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-111]
gi|418663130|ref|ZP_13224655.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-122]
gi|418873501|ref|ZP_13427796.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-125]
gi|418875136|ref|ZP_13429396.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIGC93]
gi|418878051|ref|ZP_13432286.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1165]
gi|418880879|ref|ZP_13435098.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1213]
gi|418883808|ref|ZP_13438003.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1769]
gi|418886462|ref|ZP_13440610.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1150]
gi|418894900|ref|ZP_13448995.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1057]
gi|418903410|ref|ZP_13457451.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1770]
gi|418906136|ref|ZP_13460163.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIGC345D]
gi|418911807|ref|ZP_13465790.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG547]
gi|418914299|ref|ZP_13468271.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIGC340D]
gi|418920279|ref|ZP_13474212.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIGC348]
gi|418925434|ref|ZP_13479336.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG2018]
gi|418928458|ref|ZP_13482344.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1612]
gi|418931271|ref|ZP_13485112.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1750]
gi|418934103|ref|ZP_13487926.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIGC128]
gi|418946970|ref|ZP_13499369.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-157]
gi|418951228|ref|ZP_13503343.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-160]
gi|418955442|ref|ZP_13507382.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-189]
gi|418988022|ref|ZP_13535695.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1835]
gi|418991063|ref|ZP_13538724.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1096]
gi|418993817|ref|ZP_13541454.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG290]
gi|419775299|ref|ZP_14301241.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus CO-23]
gi|419784887|ref|ZP_14310646.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-M]
gi|422742318|ref|ZP_16796324.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus MRSA177]
gi|422745568|ref|ZP_16799507.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus MRSA131]
gi|424768705|ref|ZP_18195965.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus CM05]
gi|424785031|ref|ZP_18211834.1| Carbamoyl-phosphate synthase small chain [Staphylococcus aureus
CN79]
gi|440707206|ref|ZP_20887906.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21282]
gi|440734647|ref|ZP_20914259.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus DSM 20231]
gi|443636893|ref|ZP_21120986.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21236]
gi|448742292|ref|ZP_21724242.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
KT/314250]
gi|448744020|ref|ZP_21725924.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
KT/Y21]
gi|54036822|sp|P63730.1|CARA_STAAW RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|54036827|sp|P99147.1|CARA_STAAN RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|54040874|sp|P63729.1|CARA_STAAM RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|60389609|sp|Q6GA11.1|CARA_STAAS RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|81694673|sp|Q5HGN0.1|CARA_STAAC RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|13701001|dbj|BAB42297.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus N315]
gi|14246972|dbj|BAB57364.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus Mu50]
gi|21204252|dbj|BAB94950.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus MW2]
gi|49244484|emb|CAG42913.1| putative carbamoyl-phosphate synthase, pyrimidine-specific, small
chain [Staphylococcus aureus subsp. aureus MSSA476]
gi|57285957|gb|AAW38051.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus COL]
gi|87128064|gb|ABD22578.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus USA300_FPR3757]
gi|87202466|gb|ABD30276.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|147740762|gb|ABQ49060.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus JH9]
gi|149946203|gb|ABR52139.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus JH1]
gi|150374125|dbj|BAF67385.1| carbamoyl-phosphate synthase, pyrimidine-specific, small chain
[Staphylococcus aureus subsp. aureus str. Newman]
gi|156721658|dbj|BAF78075.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus Mu3]
gi|160368184|gb|ABX29155.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing), small subunit
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|253724418|gb|EES93147.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|257789714|gb|EEV28054.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
A9781]
gi|257839302|gb|EEV63776.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
A9763]
gi|257844298|gb|EEV68680.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
A9719]
gi|257848014|gb|EEV72007.1| predicted protein [Staphylococcus aureus A9299]
gi|257850032|gb|EEV73985.1| predicted protein [Staphylococcus aureus A8115]
gi|257853819|gb|EEV76778.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
A6300]
gi|257857458|gb|EEV80356.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
A6224]
gi|257859717|gb|EEV82559.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
A5948]
gi|257863232|gb|EEV85996.1| aspartate carbamoyltransferase [Staphylococcus aureus A5937]
gi|259160238|gb|EEW45266.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
930918-3]
gi|259163671|gb|EEW48226.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
D30]
gi|269940694|emb|CBI49075.1| putative carbamoyl-phosphate synthase,pyrimidine-specific, small
chain [Staphylococcus aureus subsp. aureus TW20]
gi|282316709|gb|EFB47083.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus C427]
gi|282319891|gb|EFB50239.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus D139]
gi|282325379|gb|EFB55688.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282590545|gb|EFB95622.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
A10102]
gi|282594700|gb|EFB99684.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
A9765]
gi|282764685|gb|EFC04810.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
A8117]
gi|285816884|gb|ADC37371.1| Carbamoyl-phosphate synthase small chain [Staphylococcus aureus
04-02981]
gi|294824995|gb|EFG41417.1| carbamoyl-phosphate synthase [Staphylococcus aureus A9754]
gi|294967993|gb|EFG44021.1| carbamoyl-phosphate synthase [Staphylococcus aureus A8819]
gi|296887397|gb|EFH26299.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|297177138|gb|EFH36392.1| carbamoyl-phosphate synthase [Staphylococcus aureus A8796]
gi|300886480|gb|EFK81682.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus TCH70]
gi|302751024|gb|ADL65201.1| putative carbamoyl-phosphate synthase, pyrimidine-specific, small
chain [Staphylococcus aureus subsp. aureus str. JKD6008]
gi|304340218|gb|EFM06159.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|312438421|gb|ADQ77492.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus TCH60]
gi|312829595|emb|CBX34437.1| carbamoyl-phosphate synthase pyrimidine-specific small chain
(Carbamoyl-phosphate synthetase glutamine chain)
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315130993|gb|EFT86977.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus CGS03]
gi|315198439|gb|EFU28768.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus CGS01]
gi|320140983|gb|EFW32830.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus MRSA131]
gi|320144302|gb|EFW36068.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus MRSA177]
gi|323440976|gb|EGA98683.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
O11]
gi|329313870|gb|AEB88283.1| Carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus T0131]
gi|329724753|gb|EGG61258.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21189]
gi|329728825|gb|EGG65246.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21193]
gi|334267282|gb|EGL85746.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21305]
gi|334276980|gb|EGL95219.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21310]
gi|334277491|gb|EGL95721.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21318]
gi|341841006|gb|EGS82478.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21235]
gi|341843580|gb|EGS84803.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21259]
gi|341845727|gb|EGS86929.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21266]
gi|341847922|gb|EGS89091.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21269]
gi|341851158|gb|EGS92087.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21200]
gi|341858152|gb|EGS98953.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21201]
gi|341858492|gb|EGS99282.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21195]
gi|344177413|emb|CCC87881.1| putative carbamoyl-phosphate synthase,pyrimidine-specific, small
chain [Staphylococcus aureus subsp. aureus LGA251]
gi|359830218|gb|AEV78196.1| Carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus M013]
gi|364522418|gb|AEW65168.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus 11819-97]
gi|365166974|gb|EHM58451.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21178]
gi|365167138|gb|EHM58614.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21209]
gi|365224330|gb|EHM65595.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus VCU006]
gi|365238291|gb|EHM79128.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21334]
gi|365241799|gb|EHM82534.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21340]
gi|365244943|gb|EHM85595.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21232]
gi|365245195|gb|EHM85842.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21194]
gi|371975600|gb|EHO92894.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21252]
gi|371977609|gb|EHO94873.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21262]
gi|371978206|gb|EHO95456.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21272]
gi|371982930|gb|EHP00078.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21283]
gi|371984643|gb|EHP01752.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21333]
gi|374363090|gb|AEZ37195.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus VC40]
gi|374399701|gb|EHQ70837.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21343]
gi|375014615|gb|EHS08296.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-99]
gi|375015995|gb|EHS09639.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-24]
gi|375023386|gb|EHS16849.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-3]
gi|375029245|gb|EHS22573.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-88]
gi|375029860|gb|EHS23185.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-91]
gi|375034763|gb|EHS27913.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-122]
gi|375037175|gb|EHS30227.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-111]
gi|375037995|gb|EHS30995.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-105]
gi|375366038|gb|EHS70050.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-125]
gi|375370925|gb|EHS74717.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-189]
gi|375373865|gb|EHS77520.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-160]
gi|375377167|gb|EHS80657.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-157]
gi|377694173|gb|EHT18538.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1165]
gi|377694706|gb|EHT19070.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1057]
gi|377697059|gb|EHT21414.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1114]
gi|377714553|gb|EHT38752.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1750]
gi|377714895|gb|EHT39093.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1769]
gi|377719810|gb|EHT43980.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1835]
gi|377723185|gb|EHT47310.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1096]
gi|377725185|gb|EHT49300.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG547]
gi|377725415|gb|EHT49528.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1150]
gi|377731772|gb|EHT55825.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1213]
gi|377738370|gb|EHT62379.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1612]
gi|377742425|gb|EHT66410.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1770]
gi|377744503|gb|EHT68480.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG2018]
gi|377746976|gb|EHT70946.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG290]
gi|377757801|gb|EHT81689.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIGC340D]
gi|377765436|gb|EHT89286.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIGC345D]
gi|377765638|gb|EHT89487.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIGC348]
gi|377770196|gb|EHT93958.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIGC93]
gi|377770846|gb|EHT94605.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIGC128]
gi|383363645|gb|EID40976.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-M]
gi|383970983|gb|EID87073.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus CO-23]
gi|385196129|emb|CCG15750.1| putative carbamoyl-phosphate synthase, pyrimidine-specific, small
chain [Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|387718573|gb|EIK06531.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus VRS3a]
gi|387718924|gb|EIK06880.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus VRS2]
gi|387720249|gb|EIK08161.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus VRS1]
gi|387725805|gb|EIK13403.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus VRS4]
gi|387727918|gb|EIK15418.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus VRS5]
gi|387730788|gb|EIK18146.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus VRS6]
gi|387735725|gb|EIK22835.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus VRS8]
gi|387737403|gb|EIK24469.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus VRS7]
gi|387737957|gb|EIK25011.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus VRS9]
gi|387744446|gb|EIK31210.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus VRS10]
gi|387745736|gb|EIK32486.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus VRS11a]
gi|387747229|gb|EIK33938.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus VRS11b]
gi|402348475|gb|EJU83462.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus CM05]
gi|408423404|emb|CCJ10815.1| Carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus ST228]
gi|408425394|emb|CCJ12781.1| Carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus ST228]
gi|408427382|emb|CCJ14745.1| Carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus ST228]
gi|408429369|emb|CCJ26534.1| Carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus ST228]
gi|408431357|emb|CCJ18672.1| Carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus ST228]
gi|408433351|emb|CCJ20636.1| Carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus ST228]
gi|408435342|emb|CCJ22602.1| Carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus ST228]
gi|408437327|emb|CCJ24570.1| Carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus ST228]
gi|421956441|gb|EKU08770.1| Carbamoyl-phosphate synthase small chain [Staphylococcus aureus
CN79]
gi|436431675|gb|ELP29028.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus DSM 20231]
gi|436506245|gb|ELP42078.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21282]
gi|443406870|gb|ELS65440.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21236]
gi|445547007|gb|ELY15283.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
KT/314250]
gi|445562616|gb|ELY18783.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
KT/Y21]
Length = 366
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH YA+D +L +EVTH+ LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSLKSTDLEVTHLALNDGTVEGLKHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA+PGP DS+ +F DFV +M + K +
Sbjct: 326 PAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK 360
>gi|49483365|ref|YP_040589.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus MRSA252]
gi|282903755|ref|ZP_06311643.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus C160]
gi|282905519|ref|ZP_06313374.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282908495|ref|ZP_06316325.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|283957943|ref|ZP_06375394.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus A017934/97]
gi|295427687|ref|ZP_06820319.1| carbamoyl-phosphate synthase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297591354|ref|ZP_06949992.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus MN8]
gi|415683790|ref|ZP_11448992.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus CGS00]
gi|418566604|ref|ZP_13130977.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21264]
gi|418582036|ref|ZP_13146114.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1605]
gi|418597649|ref|ZP_13161171.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21342]
gi|418603154|ref|ZP_13166545.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21345]
gi|418891835|ref|ZP_13445950.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1176]
gi|418908913|ref|ZP_13462916.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG149]
gi|418916997|ref|ZP_13470956.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1267]
gi|418922784|ref|ZP_13476701.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1233]
gi|418982115|ref|ZP_13529823.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1242]
gi|418985782|ref|ZP_13533468.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1500]
gi|60389634|sp|Q6GHN3.1|CARA_STAAR RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|49241494|emb|CAG40180.1| putative carbamoyl-phosphate synthase, pyrimidine-specific, small
chain [Staphylococcus aureus subsp. aureus MRSA252]
gi|282327557|gb|EFB57840.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|282330811|gb|EFB60325.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282595373|gb|EFC00337.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus C160]
gi|283790092|gb|EFC28909.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus A017934/97]
gi|295128045|gb|EFG57679.1| carbamoyl-phosphate synthase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297576240|gb|EFH94956.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus MN8]
gi|315194088|gb|EFU24481.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus CGS00]
gi|371969874|gb|EHO87312.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21264]
gi|374393711|gb|EHQ65015.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21342]
gi|374393883|gb|EHQ65186.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21345]
gi|377704396|gb|EHT28705.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1242]
gi|377705600|gb|EHT29904.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1500]
gi|377710446|gb|EHT34684.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1605]
gi|377731167|gb|EHT55224.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1176]
gi|377736107|gb|EHT60137.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1233]
gi|377750171|gb|EHT74109.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1267]
gi|377753951|gb|EHT77861.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG149]
Length = 366
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH YA+D +L +EVTH+ LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSLKSTDLEVTHLALNDGTVEGLKHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA+PGP DS+ +F DFV +M + K +
Sbjct: 326 PAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK 360
>gi|417651370|ref|ZP_12301133.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21172]
gi|329727554|gb|EGG64010.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21172]
Length = 366
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH YA+D +L +EVTH+ LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSLKSTDLEVTHLALNDGTVEGLKHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA+PGP DS+ +F DFV +M + K +
Sbjct: 326 PAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK 360
>gi|257425255|ref|ZP_05601680.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 55/2053]
gi|257427915|ref|ZP_05604313.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257430548|ref|ZP_05606930.1| predicted protein [Staphylococcus aureus subsp. aureus 68-397]
gi|257433309|ref|ZP_05609667.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus E1410]
gi|257436151|ref|ZP_05612198.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus M876]
gi|282913977|ref|ZP_06321764.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus M899]
gi|282924022|ref|ZP_06331698.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus C101]
gi|293501010|ref|ZP_06666861.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 58-424]
gi|293509969|ref|ZP_06668677.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus M809]
gi|293526557|ref|ZP_06671242.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus M1015]
gi|257271712|gb|EEV03850.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 55/2053]
gi|257274756|gb|EEV06243.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257278676|gb|EEV09295.1| predicted protein [Staphylococcus aureus subsp. aureus 68-397]
gi|257281402|gb|EEV11539.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus E1410]
gi|257284433|gb|EEV14553.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus M876]
gi|282313994|gb|EFB44386.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus C101]
gi|282322045|gb|EFB52369.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus M899]
gi|290920629|gb|EFD97692.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus M1015]
gi|291096015|gb|EFE26276.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 58-424]
gi|291466913|gb|EFF09431.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus M809]
Length = 366
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH YA+D +L +EVTH+ LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSLKSTDLEVTHLALNDGTVEGLKHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA+PGP DS+ +F DFV +M + K +
Sbjct: 326 PAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK 360
>gi|418897739|ref|ZP_13451809.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIGC341D]
gi|377760774|gb|EHT84650.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIGC341D]
Length = 331
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH YA+D +L +EVTH+ LNDGT GL + L
Sbjct: 231 KFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSLKSTDLEVTHLALNDGTVEGLKHKTL 290
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA+PGP DS+ +F DFV +M + K +
Sbjct: 291 PAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK 325
>gi|418645810|ref|ZP_13207928.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-55]
gi|421150086|ref|ZP_15609742.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus str. Newbould 305]
gi|443639558|ref|ZP_21123564.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21196]
gi|375022343|gb|EHS15826.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-55]
gi|394329476|gb|EJE55578.1| carbamoyl phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus str. Newbould 305]
gi|443406765|gb|ELS65336.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21196]
Length = 366
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH YA+D +L +EVTH+ LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSLKSTDLEVTHLALNDGTVEGLKHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA+PGP DS+ +F DFV +M + K +
Sbjct: 326 PAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK 360
>gi|282850075|ref|ZP_06259457.1| carbamoyl-phosphate synthase, small subunit [Veillonella parvula
ATCC 17745]
gi|294793335|ref|ZP_06758480.1| carbamoyl-phosphate synthase, small subunit [Veillonella sp.
6_1_27]
gi|282580264|gb|EFB85665.1| carbamoyl-phosphate synthase, small subunit [Veillonella parvula
ATCC 17745]
gi|294455766|gb|EFG24131.1| carbamoyl-phosphate synthase, small subunit [Veillonella sp.
6_1_27]
Length = 355
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 66/92 (71%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ GRV I++QNH YAVD +LP VE+TH ++NDGT G+ + L
Sbjct: 264 KFGHRGSNHPVQDLRTGRVYITSQNHGYAVDDTSLPAFVEITHRSVNDGTVEGMRHKELP 323
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP D+ +F +F +LM+ K
Sbjct: 324 IFSVQYHPEASPGPTDNLYLFDEFEDLMRKGK 355
>gi|258423755|ref|ZP_05686641.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
A9635]
gi|418888991|ref|ZP_13443127.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1524]
gi|257845987|gb|EEV70015.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
A9635]
gi|377754501|gb|EHT78410.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus CIG1524]
Length = 366
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH YA+D +L +EVTH+ LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSLKSTDLEVTHLALNDGTVEGLKHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA+PGP DS+ +F DFV +M + K +
Sbjct: 326 PAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK 360
>gi|238019706|ref|ZP_04600132.1| hypothetical protein VEIDISOL_01581 [Veillonella dispar ATCC 17748]
gi|237863747|gb|EEP65037.1| hypothetical protein VEIDISOL_01581 [Veillonella dispar ATCC 17748]
Length = 355
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 66/92 (71%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ GRV I++QNH YAVD +LP VE+TH ++NDGT G+ + L
Sbjct: 264 KFGHRGSNHPVQDLRTGRVYITSQNHGYAVDDTSLPDFVEITHRSVNDGTVEGMRHKELP 323
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP D+ +F +F +LM+ K
Sbjct: 324 IFSVQYHPEASPGPTDNLYLFDEFEDLMRKGK 355
>gi|269797628|ref|YP_003311528.1| carbamoyl-phosphate synthase small subunit [Veillonella parvula DSM
2008]
gi|294795154|ref|ZP_06760288.1| carbamoyl-phosphate synthase, small subunit [Veillonella sp.
3_1_44]
gi|269094257|gb|ACZ24248.1| carbamoyl-phosphate synthase, small subunit [Veillonella parvula
DSM 2008]
gi|294453946|gb|EFG22321.1| carbamoyl-phosphate synthase, small subunit [Veillonella sp.
3_1_44]
Length = 355
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 66/92 (71%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ GRV I++QNH YAVD +LP VE+TH ++NDGT G+ + L
Sbjct: 264 KFGHRGSNHPVQDLRTGRVYITSQNHGYAVDDTSLPDFVEITHRSVNDGTVEGMRHKELP 323
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP D+ +F +F +LM+ K
Sbjct: 324 IFSVQYHPEASPGPTDNLYLFDEFEDLMRKGK 355
>gi|134299539|ref|YP_001113035.1| carbamoyl-phosphate synthase small subunit [Desulfotomaculum
reducens MI-1]
gi|134052239|gb|ABO50210.1| carbamoyl-phosphate synthase small subunit [Desulfotomaculum
reducens MI-1]
Length = 359
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV ++++GRV I++QNH YAV +LP +EVTHINLND T G+ + L
Sbjct: 266 KFGHRGANHPVKDLESGRVYITSQNHGYAVAKDSLPTDMEVTHINLNDNTVEGMRHLNLP 325
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
V S+QYH EA+PGP DS+ +F +F++ MK KY A
Sbjct: 326 VFSVQYHPEAAPGPMDSEYLFENFLDNMK--KYTA 358
>gi|327399138|ref|YP_004340007.1| carbamoyl-phosphate synthase small subunit [Hippea maritima DSM
10411]
gi|327181767|gb|AEA33948.1| carbamoyl-phosphate synthase, small subunit [Hippea maritima DSM
10411]
Length = 374
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
KFGHHGGNHPV I++ + ++AQNHNYA D +L KG ++T+ NLNDG+ G+ + L
Sbjct: 282 KFGHHGGNHPVKEIESDNIFVTAQNHNYAADEKSLLEKGFKITYKNLNDGSVEGMMHKEL 341
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
VMS+Q+H EASPGP D++ +F +F ++K
Sbjct: 342 PVMSVQFHPEASPGPHDAEGIFENFATMVK 371
>gi|108804315|ref|YP_644252.1| carbamoyl-phosphate synthase small subunit [Rubrobacter
xylanophilus DSM 9941]
gi|108765558|gb|ABG04440.1| carbamoyl-phosphate synthase small subunit [Rubrobacter
xylanophilus DSM 9941]
Length = 369
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 46/94 (48%), Positives = 64/94 (68%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGHHG NHPV N++ GR+EI++QNH +A+ +LP+GV +TH NL DGT G+ + L
Sbjct: 276 FGHHGANHPVRNLETGRIEITSQNHGFALREESLPEGVRLTHRNLYDGTVEGIEHAGLRA 335
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH E+SPGP DS +F FV+ + + R
Sbjct: 336 WSVQYHPESSPGPRDSGYLFDAFVQRISENEERG 369
>gi|418282974|ref|ZP_12895731.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21202]
gi|365168571|gb|EHM59909.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus 21202]
Length = 366
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH YA+D +L +EVTH+ LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSLKSTDLEVTHLALNDGTVEGLKHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA+PGP DS+ +F DFV +M + K +
Sbjct: 326 PAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK 360
>gi|427405724|ref|ZP_18895929.1| carbamoyl-phosphate synthase, small subunit [Selenomonas sp. F0473]
gi|425708565|gb|EKU71604.1| carbamoyl-phosphate synthase, small subunit [Selenomonas sp. F0473]
Length = 357
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV N++ G+V ISAQNH YAVDP +L +EVTHIN+ND T GL + +L
Sbjct: 266 KFGHRGGNQPVKNLKTGQVHISAQNHGYAVDPDSLTGTPLEVTHINVNDDTIEGLRHTSL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+QYH EA+PGPDD+ +F F +LMK
Sbjct: 326 PIFSVQYHPEAAPGPDDNMYLFDAFWDLMK 355
>gi|162139871|ref|YP_746108.2| carbamoyl phosphate synthase small subunit [Granulibacter
bethesdensis CGDNIH1]
Length = 403
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 63/89 (70%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
GH G N PV + GRVEI++QNH +AVD ++LP GVEVTH++L DG+ G+A P+
Sbjct: 315 LGHRGANQPVKELATGRVEITSQNHGFAVDASSLPAGVEVTHVSLFDGSNEGIAAPSKRC 374
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+QYH EASPGP DS +F FV+++ S
Sbjct: 375 FSVQYHPEASPGPSDSHHLFHRFVDMLGS 403
>gi|328952754|ref|YP_004370088.1| carbamoyl-phosphate synthase small subunit [Desulfobacca
acetoxidans DSM 11109]
gi|328453078|gb|AEB08907.1| carbamoyl-phosphate synthase, small subunit [Desulfobacca
acetoxidans DSM 11109]
Length = 378
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV N+ NG+VEI++QNH +AVD ++ VE+TH+NLND T GL +P L
Sbjct: 289 KFGHRGGNQPVKNLLNGKVEITSQNHGFAVDLNSINDPAVELTHVNLNDNTLEGLRHPKL 348
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
S+QYH EASPGP D+D +F +F+ L++
Sbjct: 349 KAFSVQYHPEASPGPHDADYLFDEFLNLVE 378
>gi|373106390|ref|ZP_09520693.1| carbamoyl-phosphate synthase, small subunit [Stomatobaculum longum]
gi|371652765|gb|EHO18173.1| carbamoyl-phosphate synthase, small subunit [Stomatobaculum longum]
Length = 358
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
K+GH GGNHPV ++++GR ISAQNH YAVD +L PK E +N+NDGT GLAY
Sbjct: 265 KYGHRGGNHPVRDLESGRAYISAQNHGYAVDDKSLDPKVAETRFVNVNDGTNEGLAYCGK 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
N++++Q+H EA PGP D+ +F F+++M+
Sbjct: 325 NILTVQFHPEACPGPHDTSYLFDHFLDMME 354
>gi|229463795|gb|ACQ66323.1| carbamoyl phosphate synthetase A [Populus maximowiczii x Populus
nigra]
Length = 281
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/56 (83%), Positives = 52/56 (92%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAY 56
KFGHHGGNHPV N+ RVEISAQNHNYAVDPA+LP+GVEVTHINLNDG+CAGLA+
Sbjct: 226 KFGHHGGNHPVRNLLANRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAF 281
>gi|313683473|ref|YP_004061211.1| carbamoyl-phosphate synthase small subunit [Sulfuricurvum kujiense
DSM 16994]
gi|313156333|gb|ADR35011.1| carbamoyl-phosphate synthase small subunit [Sulfuricurvum kujiense
DSM 16994]
Length = 375
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/89 (55%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N++ G VEI+AQNHNY V P ++ + EVTHINL D T GL Y + +
Sbjct: 287 KFGHHGGNHPVKNVKTGMVEITAQNHNYNV-PESVREIAEVTHINLFDNTIEGLRYNSGH 345
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S+Q+H E+SPGP +S +F +F++L++
Sbjct: 346 VFSVQHHPESSPGPKESRYIFSEFLQLLQ 374
>gi|384549957|ref|YP_005739209.1| putative carbamoyl-phosphate synthase, pyrimidine-specific, small
chain [Staphylococcus aureus subsp. aureus JKD6159]
gi|302332806|gb|ADL22999.1| putative carbamoyl-phosphate synthase, pyrimidine-specific, small
chain [Staphylococcus aureus subsp. aureus JKD6159]
Length = 366
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH YA+D +L +EVTH+ LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSLKSTDLEVTHLALNDGTVEGLKHKKL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA+PGP DS+ +F DFV +M + K +
Sbjct: 326 PAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK 360
>gi|83589732|ref|YP_429741.1| carbamoyl-phosphate synthase small subunit [Moorella thermoacetica
ATCC 39073]
gi|83572646|gb|ABC19198.1| carbamoyl-phosphate synthase small subunit [Moorella thermoacetica
ATCC 39073]
Length = 361
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 62/87 (71%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGH GGNHPV ++ GRV I++QNH YAV +LP G V+HINLNDGT GL + L
Sbjct: 269 FGHRGGNHPVKDLSTGRVYITSQNHGYAVRADSLPTGAVVSHINLNDGTVEGLRHRELPA 328
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH E+SPGP DS+ +F +F+ L+
Sbjct: 329 FSVQYHPESSPGPTDSEYLFHEFIRLV 355
>gi|75676630|ref|YP_319051.1| carbamoyl phosphate synthase small subunit [Nitrobacter
winogradskyi Nb-255]
gi|74421500|gb|ABA05699.1| carbamoyl-phosphate synthase small subunit [Nitrobacter
winogradskyi Nb-255]
Length = 396
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 48/90 (53%), Positives = 61/90 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV N G+VEI++ NH +AVD TLPKG + TH++L DG+ G+ V
Sbjct: 305 GHHGANHPVRNETTGKVEITSMNHGFAVDETTLPKGAKQTHVSLFDGSNCGIELEGRPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +FR F +LM+ K
Sbjct: 365 SVQYHPEASPGPRDSHYLFRRFADLMRENK 394
>gi|384547446|ref|YP_005736699.1| carbamoyl-phosphate synthase small subunit [Staphylococcus aureus
subsp. aureus ED133]
gi|298694495|gb|ADI97717.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
subsp. aureus ED133]
Length = 366
Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+++I++QNH YA+D +L +EVTH+ LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKNLETGKIDITSQNHGYAIDIDSLKSTDLEVTHLALNDGTVEGLKHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA+PGP DS+ +F DFV +M + K +
Sbjct: 326 PAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK 360
>gi|332706002|ref|ZP_08426075.1| carbamoyl-phosphate synthase small subunit [Moorea producens 3L]
gi|332355262|gb|EGJ34729.1| carbamoyl-phosphate synthase small subunit [Moorea producens 3L]
Length = 385
Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 65/90 (72%), Gaps = 2/90 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHP Q VEI++QNH +A+DP TL VEVTH+NLND T AGL + +L
Sbjct: 291 KFGHRGLNHPAGLQQ--MVEITSQNHGFAIDPDTLGTEVEVTHLNLNDRTVAGLRHKSLP 348
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+QYH EASPGP D+D +F+ FVELM+S
Sbjct: 349 FFSVQYHPEASPGPHDADYLFQQFVELMRS 378
>gi|392409585|ref|YP_006446192.1| carbamoyl-phosphate synthase small subunit [Desulfomonile tiedjei
DSM 6799]
gi|390622721|gb|AFM23928.1| carbamoyl-phosphate synthase small subunit [Desulfomonile tiedjei
DSM 6799]
Length = 369
Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 62/89 (69%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGHHG NHPV I+ G VEI++QNHN+AVDP ++ E+TH NLNDGT G+ + +
Sbjct: 280 FGHHGANHPVRRIETGHVEITSQNHNFAVDPESVRSECEITHTNLNDGTVEGMVHKKYPL 339
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+QYH EASPGP DS +F F L+++
Sbjct: 340 FSIQYHPEASPGPHDSRYLFEKFRALIEN 368
>gi|110598620|ref|ZP_01386887.1| carbamoyl-phosphate synthase, small subunit [Chlorobium
ferrooxidans DSM 13031]
gi|110339789|gb|EAT58297.1| carbamoyl-phosphate synthase, small subunit [Chlorobium
ferrooxidans DSM 13031]
Length = 369
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 65/92 (70%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N+QN ++EI++QNH ++V+ +LP+ +E+TH+NL D T G+ + L
Sbjct: 277 KFGHHGSNHPVKNLQNSQIEITSQNHGFSVNMESLPEALEMTHLNLYDHTVEGVKHKTLP 336
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EA+PGP DS +F +F LM K
Sbjct: 337 CFSVQYHPEAAPGPHDSHYLFAEFTSLMDQAK 368
>gi|410997073|gb|AFV98538.1| hypothetical protein B649_11135 [uncultured Sulfuricurvum sp.
RIFRC-1]
Length = 375
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 49/89 (55%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV NIQ G VEI+AQNHNY V P ++ + VTH+NL D T GL Y + +
Sbjct: 287 KFGHHGGNHPVKNIQTGMVEITAQNHNYNV-PESVREIATVTHVNLFDNTIEGLRYNSGH 345
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S+Q+H E+SPGP +S +F +F++L++
Sbjct: 346 VFSVQHHPESSPGPKESRYIFSEFLQLLQ 374
>gi|260685110|ref|YP_003216395.1| carbamoyl phosphate synthase small subunit [Clostridium difficile
CD196]
gi|260688768|ref|YP_003219902.1| carbamoyl phosphate synthase small subunit [Clostridium difficile
R20291]
gi|260211273|emb|CBA66828.1| carbamoyl-phosphate synthase, pyrimidine-specific, small chain
[Clostridium difficile CD196]
gi|260214785|emb|CBE07506.1| carbamoyl-phosphate synthase, pyrimidine-specific, small chain
[Clostridium difficile R20291]
Length = 364
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 66/89 (74%), Gaps = 2/89 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGNHPV +++ G+V I++QNH Y V + +P+ ++VTHINLND T G+ + L+
Sbjct: 278 KFGHRGGNHPVKDLEEGKVFITSQNHGYYV--SEVPEQMKVTHINLNDNTVEGMRHEKLD 335
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S+QYH EA PGP D+D +F F+EL+K
Sbjct: 336 VYSVQYHPEACPGPKDNDYIFDKFLELVK 364
>gi|430747433|ref|YP_007206562.1| carbamoyl-phosphate synthase small subunit [Singulisphaera
acidiphila DSM 18658]
gi|430019153|gb|AGA30867.1| carbamoyl-phosphate synthase, small subunit [Singulisphaera
acidiphila DSM 18658]
Length = 385
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 60/88 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV N G+VEI+ QNH +AVDP TLP VE +H+NLND T GL + L
Sbjct: 297 KFGHRGANHPVRNEATGKVEITTQNHGFAVDPNTLPPDVEASHVNLNDQTLEGLRHKKLP 356
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
V S+QYH E+S GP DS +F F ++M
Sbjct: 357 VFSVQYHPESSAGPHDSQYLFAQFRKMM 384
>gi|424910895|ref|ZP_18334272.1| carbamoyl-phosphate synthase, small subunit [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392846926|gb|EJA99448.1| carbamoyl-phosphate synthase, small subunit [Rhizobium
leguminosarum bv. viciae USDA 2370]
Length = 401
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 50/93 (53%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+GVE THI+L DGT GL V
Sbjct: 304 GHHGANHPVKDFTTGKVEIVSMNHGFAVDTKSLPEGVEETHISLFDGTNCGLRITGKPVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR FV L++ K A
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFVNLLREKKGEA 396
>gi|291279412|ref|YP_003496247.1| carbamoylphosphate synthase small subunit [Deferribacter
desulfuricans SSM1]
gi|290754114|dbj|BAI80491.1| carbamoylphosphate synthase, small subunit [Deferribacter
desulfuricans SSM1]
Length = 372
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 50/92 (54%), Positives = 65/92 (70%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGN PV ++ +VEI+AQNH +AVD +L VEVTHINLND T G+ +
Sbjct: 281 KFGHHGGNQPVMDLDTKKVEITAQNHCFAVDIDSLSDIVEVTHINLNDKTVEGVRHKTKP 340
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V ++QYH E SPGP D+ +F+ FV+L+KS K
Sbjct: 341 VFAVQYHPENSPGPHDAIYLFKRFVDLIKSCK 372
>gi|255657545|ref|ZP_05402954.1| carbamoyl phosphate synthase small subunit [Clostridium difficile
QCD-23m63]
gi|296452782|ref|ZP_06894470.1| carbamoyl phosphate synthase small subunit [Clostridium difficile
NAP08]
gi|296879966|ref|ZP_06903937.1| carbamoyl phosphate synthase small subunit [Clostridium difficile
NAP07]
gi|296258378|gb|EFH05285.1| carbamoyl phosphate synthase small subunit [Clostridium difficile
NAP08]
gi|296429032|gb|EFH14908.1| carbamoyl phosphate synthase small subunit [Clostridium difficile
NAP07]
Length = 349
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 66/89 (74%), Gaps = 2/89 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGNHPV +++ G+V I++QNH Y V + +P+ ++VTHINLND T G+ + L+
Sbjct: 263 KFGHRGGNHPVKDLEEGKVFITSQNHGYYV--SEVPEQMKVTHINLNDNTVEGMRHEKLD 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S+QYH EA PGP D+D +F F+EL+K
Sbjct: 321 VYSVQYHPEACPGPKDNDYIFDKFLELVK 349
>gi|126701216|ref|YP_001090113.1| carbamoyl phosphate synthase small subunit [Clostridium difficile
630]
gi|254977218|ref|ZP_05273690.1| carbamoyl phosphate synthase small subunit [Clostridium difficile
QCD-66c26]
gi|255094545|ref|ZP_05324023.1| carbamoyl phosphate synthase small subunit [Clostridium difficile
CIP 107932]
gi|255102804|ref|ZP_05331781.1| carbamoyl phosphate synthase small subunit [Clostridium difficile
QCD-63q42]
gi|255316300|ref|ZP_05357883.1| carbamoyl phosphate synthase small subunit [Clostridium difficile
QCD-76w55]
gi|255518960|ref|ZP_05386636.1| carbamoyl phosphate synthase small subunit [Clostridium difficile
QCD-97b34]
gi|255652139|ref|ZP_05399041.1| carbamoyl phosphate synthase small subunit [Clostridium difficile
QCD-37x79]
gi|306521870|ref|ZP_07408217.1| carbamoyl phosphate synthase small subunit [Clostridium difficile
QCD-32g58]
gi|384362786|ref|YP_006200638.1| carbamoyl phosphate synthase small subunit [Clostridium difficile
BI1]
gi|423083440|ref|ZP_17071983.1| carbamoyl-phosphate synthase, small subunit [Clostridium difficile
002-P50-2011]
gi|423086529|ref|ZP_17074933.1| carbamoyl-phosphate synthase, small subunit [Clostridium difficile
050-P50-2011]
gi|423091303|ref|ZP_17079529.1| carbamoyl-phosphate synthase, small subunit [Clostridium difficile
70-100-2010]
gi|115252653|emb|CAJ70496.1| Carbamoyl-phosphate synthase small chain [Clostridium difficile
630]
gi|357545583|gb|EHJ27553.1| carbamoyl-phosphate synthase, small subunit [Clostridium difficile
002-P50-2011]
gi|357546697|gb|EHJ28609.1| carbamoyl-phosphate synthase, small subunit [Clostridium difficile
050-P50-2011]
gi|357555204|gb|EHJ36886.1| carbamoyl-phosphate synthase, small subunit [Clostridium difficile
70-100-2010]
Length = 349
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 66/89 (74%), Gaps = 2/89 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGNHPV +++ G+V I++QNH Y V + +P+ ++VTHINLND T G+ + L+
Sbjct: 263 KFGHRGGNHPVKDLEEGKVFITSQNHGYYV--SEVPEQMKVTHINLNDNTVEGMRHEKLD 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S+QYH EA PGP D+D +F F+EL+K
Sbjct: 321 VYSVQYHPEACPGPKDNDYIFDKFLELVK 349
>gi|320104873|ref|YP_004180464.1| carbamoyl-phosphate synthase small subunit [Isosphaera pallida ATCC
43644]
gi|319752155|gb|ADV63915.1| carbamoyl-phosphate synthase small subunit [Isosphaera pallida ATCC
43644]
Length = 380
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/94 (52%), Positives = 63/94 (67%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV + GRVEI+ QNH +AVDP++LP+ V TH NLND T GL + AL
Sbjct: 283 KFGHRGANHPVRHEATGRVEITTQNHGFAVDPSSLPEVVRATHFNLNDRTLEGLRHRALP 342
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
+ ++QYH EAS GP DS +F +F L+ + R
Sbjct: 343 IFAVQYHPEASAGPHDSHYLFDEFRTLIDEAQGR 376
>gi|94986159|ref|YP_605523.1| carbamoyl phosphate synthase small subunit [Deinococcus
geothermalis DSM 11300]
gi|226700906|sp|Q1IWN0.1|CARA_DEIGD RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|94556440|gb|ABF46354.1| carbamoyl-phosphate synthase, small subunit [Deinococcus
geothermalis DSM 11300]
Length = 394
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEV-THINLNDGTCAGLAYPAL 59
KFGH GGN PV N+ G VEI++QNH YAVD A++P G V TH+NLNDGT G+A+
Sbjct: 285 KFGHRGGNQPVKNLLTGNVEITSQNHGYAVDIASIPDGAFVATHVNLNDGTLEGMAHSRY 344
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVE 86
V S+QYH EASPGP DS +F F+E
Sbjct: 345 PVFSVQYHPEASPGPHDSRYLFDRFIE 371
>gi|255308624|ref|ZP_05352795.1| carbamoyl phosphate synthase small subunit [Clostridium difficile
ATCC 43255]
Length = 349
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 66/89 (74%), Gaps = 2/89 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGNHPV +++ G+V I++QNH Y V + +P+ ++VTHINLND T G+ + L+
Sbjct: 263 KFGHRGGNHPVKDLEEGKVFITSQNHGYYV--SEVPEQMKVTHINLNDNTVEGMRHEKLD 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S+QYH EA PGP D+D +F F+EL+K
Sbjct: 321 VYSVQYHPEACPGPKDNDYIFDKFLELVK 349
>gi|314936635|ref|ZP_07843982.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus hominis
subsp. hominis C80]
gi|313655254|gb|EFS18999.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus hominis
subsp. hominis C80]
Length = 368
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G+V+I++QNH YA+D +L +EVTHI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKDLRTGKVDITSQNHGYAIDKDSLKNTDLEVTHIALNDGTVEGLRHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EA PGP DS+ +F +F+++M+ K
Sbjct: 326 PAFSVQYHPEARPGPSDSNYLFDEFLDMMRDFK 358
>gi|401563512|ref|ZP_10804467.1| carbamoyl-phosphate synthase, small subunit [Selenomonas sp.
FOBRC6]
gi|400189755|gb|EJO23829.1| carbamoyl-phosphate synthase, small subunit [Selenomonas sp.
FOBRC6]
Length = 357
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV N++ G+V ISAQNH YAVDPA+L + VTH N+ND T GL + L
Sbjct: 266 KFGHRGGNQPVKNLKMGKVHISAQNHGYAVDPASLAGTPLVVTHTNVNDDTIEGLRHTGL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+QYH EA+PGPDD+ +F +F +LMK
Sbjct: 326 PIFSVQYHPEAAPGPDDNMYLFDEFWDLMK 355
>gi|302874441|ref|YP_003843074.1| carbamoyl-phosphate synthase small subunit [Clostridium
cellulovorans 743B]
gi|307690952|ref|ZP_07633398.1| carbamoyl phosphate synthase small subunit [Clostridium
cellulovorans 743B]
gi|302577298|gb|ADL51310.1| carbamoyl-phosphate synthase, small subunit [Clostridium
cellulovorans 743B]
Length = 361
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/89 (55%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNH V++I+ R I++QNH YAVDPA+L K V VTHINLND T G+ + L
Sbjct: 264 KFGHRGGNHGVYDIERDRAYITSQNHGYAVDPASLEGKDVVVTHINLNDNTVEGMKHETL 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
V S+Q+H E +PGP+DS +F F++LM
Sbjct: 324 PVFSVQFHPEGAPGPEDSAYLFDKFMDLM 352
>gi|334127735|ref|ZP_08501638.1| carbamoyl-phosphate synthase, small subunit [Centipeda periodontii
DSM 2778]
gi|333388871|gb|EGK60041.1| carbamoyl-phosphate synthase, small subunit [Centipeda periodontii
DSM 2778]
Length = 357
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV N++ G+V ISAQNH YAVDP +L + VTHIN+ND T GL + +L
Sbjct: 266 KFGHRGGNQPVKNLKTGKVHISAQNHGYAVDPDSLEGTPLIVTHINVNDNTIEGLRHTSL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+QYH EA+PGPDD+ +F +F LMK
Sbjct: 326 PIFSVQYHPEAAPGPDDNMYLFDEFWNLMK 355
>gi|225872351|ref|YP_002753806.1| carbamoyl-phosphate synthase small subunit [Acidobacterium
capsulatum ATCC 51196]
gi|225791948|gb|ACO32038.1| carbamoyl-phosphate synthase, small subunit [Acidobacterium
capsulatum ATCC 51196]
Length = 376
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
+FGHHGGNHPV + G+VEI+ NHN+AVDP ++ V++THI+LND T GL + +
Sbjct: 283 RFGHHGGNHPVKCTETGKVEITCHNHNFAVDPDSINTSEVDLTHIDLNDNTLEGLRHRNM 342
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP DS +FRDF ++M+ K
Sbjct: 343 PLFSVQYHPEASPGPHDSHYLFRDFRKMMEDWK 375
>gi|193213612|ref|YP_001999565.1| carbamoyl phosphate synthase small subunit [Chlorobaculum parvum
NCIB 8327]
gi|193087089|gb|ACF12365.1| carbamoyl-phosphate synthase, small subunit [Chlorobaculum parvum
NCIB 8327]
Length = 366
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 64/92 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N+ N +EI++QNH +AV+ TLP +E+TH NL D T G+ + L
Sbjct: 274 KFGHHGANHPVKNLMNSTIEITSQNHGFAVEMDTLPGDLELTHKNLYDLTVEGVRHRELP 333
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EA+PGP DS +F++F ELM + K
Sbjct: 334 CFSVQYHPEAAPGPHDSHYLFKEFTELMDAAK 365
>gi|302871665|ref|YP_003840301.1| carbamoyl-phosphate synthase small subunit [Caldicellulosiruptor
obsidiansis OB47]
gi|302574524|gb|ADL42315.1| carbamoyl-phosphate synthase, small subunit [Caldicellulosiruptor
obsidiansis OB47]
Length = 356
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 46/91 (50%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++ G+V I++QNHNYA++ K +++TH+N+ND T G A+ L
Sbjct: 267 KFGHHGGNHPVKDLTTGKVYITSQNHNYAIEYKEYEK-IKITHVNVNDKTVEGFAHLDLP 325
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSV 91
++S+QYH EASPGP DS +F F +L+ V
Sbjct: 326 IVSVQYHPEASPGPHDSKYIFDQFTKLLNGV 356
>gi|83644089|ref|YP_432524.1| carbamoyl phosphate synthase small subunit [Hahella chejuensis KCTC
2396]
gi|83632132|gb|ABC28099.1| Carbamoylphosphate synthase small subunit [Hahella chejuensis KCTC
2396]
Length = 381
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 45/95 (47%), Positives = 64/95 (67%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV +++ G+V I++QNH +AVD ++LP +E TH +L DG+ G+ +
Sbjct: 286 KFGHHGANHPVQDLRTGQVMITSQNHGFAVDESSLPANLEATHKSLFDGSLQGIRRTDVA 345
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D +F F++ M+ VKYR+
Sbjct: 346 AFSFQGHPEASPGPHDVAPLFDQFIDFMREVKYRS 380
>gi|70726713|ref|YP_253627.1| carbamoyl phosphate synthase small subunit [Staphylococcus
haemolyticus JCSC1435]
gi|82592663|sp|Q4L5Q4.1|CARA_STAHJ RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|68447437|dbj|BAE05021.1| carbamoyl-phosphate synthase small chain [Staphylococcus
haemolyticus JCSC1435]
Length = 366
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV ++++G+V+I++QNH YA+D +L +EVTHI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKDLRSGKVDITSQNHGYAIDKNSLVNTDLEVTHIALNDGTVEGLRHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F +F+ +MK K +
Sbjct: 326 PAFSVQYHPEARPGPSDSNYLFDEFMTMMKEFKEK 360
>gi|258545358|ref|ZP_05705592.1| carbamoyl-phosphate synthase, small subunit [Cardiobacterium
hominis ATCC 15826]
gi|258519391|gb|EEV88250.1| carbamoyl-phosphate synthase, small subunit [Cardiobacterium
hominis ATCC 15826]
Length = 375
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/92 (52%), Positives = 63/92 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ GRV I++QNH +AVD ATLP+ V TH +L DG+ GLA+
Sbjct: 283 KFGHHGANHPVQDLATGRVMITSQNHGFAVDEATLPENVRATHRSLFDGSLQGLAFTDRP 342
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V + Q H EASPGP D++ +F FV M++ K
Sbjct: 343 VFAFQGHPEASPGPHDAEVLFGQFVAAMRAQK 374
>gi|320528992|ref|ZP_08030084.1| carbamoyl-phosphate synthase, small subunit [Selenomonas artemidis
F0399]
gi|320138622|gb|EFW30512.1| carbamoyl-phosphate synthase, small subunit [Selenomonas artemidis
F0399]
Length = 357
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV + G+V ISAQNH YAV PA+L +EVTHIN+ND T GL + +L
Sbjct: 266 KFGHRGGNQPVKTLTTGQVHISAQNHGYAVAPASLAGTPLEVTHINVNDETIEGLRHTSL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSV 91
+ S+QYH EA+PGPDD+ +F F +LMK V
Sbjct: 326 PIFSVQYHPEAAPGPDDNMYLFDTFWDLMKGV 357
>gi|418297175|ref|ZP_12909017.1| carbamoyl phosphate synthase small subunit [Agrobacterium
tumefaciens CCNWGS0286]
gi|355538273|gb|EHH07520.1| carbamoyl phosphate synthase small subunit [Agrobacterium
tumefaciens CCNWGS0286]
Length = 401
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/93 (53%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+GVE THI+L DGT GL V
Sbjct: 304 GHHGANHPVKDFTTGKVEIVSMNHGFAVDTKSLPEGVEETHISLFDGTNCGLRIVGKPVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR FV L++ K A
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFVNLLRENKGEA 396
>gi|357057664|ref|ZP_09118522.1| carbamoyl-phosphate synthase [Selenomonas infelix ATCC 43532]
gi|355374912|gb|EHG22203.1| carbamoyl-phosphate synthase [Selenomonas infelix ATCC 43532]
Length = 357
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV N++ G+V ISAQNH YAVDPA+L + VTH N+ND T GL + +L
Sbjct: 266 KFGHRGGNQPVKNLKMGKVHISAQNHGYAVDPASLSGTPLVVTHTNVNDDTIEGLRHTSL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+QYH EA+PGPDD+ +F +F LMK
Sbjct: 326 PIFSVQYHPEAAPGPDDNMYLFDEFWNLMK 355
>gi|302392286|ref|YP_003828106.1| carbamoyl-phosphate synthase small subunit [Acetohalobium
arabaticum DSM 5501]
gi|302204363|gb|ADL13041.1| carbamoyl-phosphate synthase small subunit [Acetohalobium
arabaticum DSM 5501]
Length = 359
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 62/88 (70%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV N+ G+V I++QNH YAV +LP+ + VTH NLND T G+ + L
Sbjct: 267 KFGHRGANHPVKNLSTGQVYITSQNHGYAVKEESLPEEMIVTHKNLNDDTVEGMKHTKLP 326
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
+ S+QYH EA+PGP DSD +F F+EL+
Sbjct: 327 IFSVQYHPEAAPGPHDSDFLFNKFIELI 354
>gi|310821288|ref|YP_003953646.1| carbamoyl-phosphate synthase small subunit [Stigmatella aurantiaca
DW4/3-1]
gi|309394360|gb|ADO71819.1| Carbamoyl-phosphate synthase, small subunit [Stigmatella aurantiaca
DW4/3-1]
Length = 371
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 60/88 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV ++ G+VEI+AQNH +AVD A+L VTHINLNDGT GL+ P
Sbjct: 282 KFGHRGANQPVKDLTTGKVEITAQNHGFAVDDASLKGKAVVTHINLNDGTVEGLSIPDAR 341
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH E+SPGP D+ +F F +LM
Sbjct: 342 AFSVQYHPESSPGPHDARYLFARFAKLM 369
>gi|168701286|ref|ZP_02733563.1| carbamoyl phosphate synthase small subunit [Gemmata obscuriglobus
UQM 2246]
Length = 368
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 60/88 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV N ++EI+ QNH +AVDP TLPK V+ THINLND T GL + L
Sbjct: 280 KFGHRGANQPVRNELTKQIEITTQNHGFAVDPTTLPKDVQPTHINLNDNTLEGLRHTTLP 339
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
V S+QYH EA+ GP DS +F +F +LM
Sbjct: 340 VFSVQYHPEAAAGPHDSSYLFEEFRKLM 367
>gi|320333558|ref|YP_004170269.1| carbamoyl-phosphate synthase small subunit [Deinococcus
maricopensis DSM 21211]
gi|319754847|gb|ADV66604.1| carbamoyl-phosphate synthase, small subunit [Deinococcus
maricopensis DSM 21211]
Length = 394
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV N+ G VEI++QNH YAVD ++P G + THINLNDGT G+A+
Sbjct: 285 KFGHRGGNQPVKNLLTGNVEITSQNHGYAVDLESIPNGAFQATHINLNDGTLEGMAHTRY 344
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVE 86
V S+QYH EASPGP DS +F F+E
Sbjct: 345 PVFSVQYHPEASPGPHDSRYLFDRFIE 371
>gi|114777930|ref|ZP_01452844.1| Carbamoyl-phosphate synthase, small subunit [Mariprofundus
ferrooxydans PV-1]
gi|114551717|gb|EAU54269.1| Carbamoyl-phosphate synthase, small subunit [Mariprofundus
ferrooxydans PV-1]
Length = 374
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 63/92 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGNHPV + G++EI++QNH +AV +P GVE+TH +L DGT GL +
Sbjct: 282 KFGHRGGNHPVKDETTGKIEITSQNHGFAVSDDAVPAGVEITHRSLFDGTVEGLRVTGKS 341
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+QYH EASPGP DSD +F F E++ + +
Sbjct: 342 VFSVQYHPEASPGPHDSDYLFDRFAEMVNAAR 373
>gi|330813715|ref|YP_004357954.1| carbamoyl-phosphate synthase small subunit [Candidatus Pelagibacter
sp. IMCC9063]
gi|327486810|gb|AEA81215.1| carbamoyl-phosphate synthase small chain [Candidatus Pelagibacter
sp. IMCC9063]
Length = 397
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 65/88 (73%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G NHPV N+ +VEI++QNH + +D +TLPK +++TH++L DG+ G++ +
Sbjct: 305 GHRGANHPVKNLLTEKVEITSQNHGFEIDKSTLPKDIDITHVSLFDGSIEGISSSDKSAF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+QYH EASPGP DS+ +F+ F+E++KS
Sbjct: 365 SVQYHPEASPGPHDSNYLFKQFIEIIKS 392
>gi|126649700|ref|ZP_01721936.1| carbamoyl-phosphate synthase small subunit [Bacillus sp. B14905]
gi|126593419|gb|EAZ87364.1| carbamoyl-phosphate synthase small subunit [Bacillus sp. B14905]
Length = 366
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPALN 60
FGH GGNHPV +++ GR ++++QNH YA+D +L +E+THI LNDGTC G+ +
Sbjct: 268 FGHRGGNHPVKDLRTGRTDLTSQNHGYAIDIESLQDTDLELTHIALNDGTCEGVRHKKYP 327
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ ++QYH EASPGP+DS+ +F +F+E+M+
Sbjct: 328 IFTVQYHPEASPGPEDSNHLFDEFIEMME 356
>gi|299535894|ref|ZP_07049214.1| carbamoylphosphate synthase small subunit [Lysinibacillus
fusiformis ZC1]
gi|424738834|ref|ZP_18167263.1| carbamoylphosphate synthase small subunit [Lysinibacillus
fusiformis ZB2]
gi|298728646|gb|EFI69201.1| carbamoylphosphate synthase small subunit [Lysinibacillus
fusiformis ZC1]
gi|422947318|gb|EKU41715.1| carbamoylphosphate synthase small subunit [Lysinibacillus
fusiformis ZB2]
Length = 366
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPALN 60
FGH GGNHPV +++ GR ++++QNH YA+D +L +E+THI LNDGTC G+ +
Sbjct: 268 FGHRGGNHPVKDLRTGRTDLTSQNHGYAIDIESLKDTDLELTHIALNDGTCEGVRHKKYP 327
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ ++QYH EASPGP+DS+ +F +F+E+M+
Sbjct: 328 IFTVQYHPEASPGPEDSNHLFDEFIEMME 356
>gi|312793753|ref|YP_004026676.1| carbamoyl-phosphate synthase, small subunit [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180893|gb|ADQ41063.1| carbamoyl-phosphate synthase, small subunit [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 356
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 46/91 (50%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++ +G+V I++QNHNYA++ K +++TH+N+ND T G A+ L
Sbjct: 267 KFGHHGGNHPVKDLISGKVYITSQNHNYAIEYKEYEK-IKITHVNVNDKTVEGFAHVDLP 325
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSV 91
++S+QYH EASPGP DS +F F +L+ V
Sbjct: 326 IVSVQYHPEASPGPHDSKYIFDQFTKLLNGV 356
>gi|429760288|ref|ZP_19292769.1| carbamoyl-phosphate synthase, small subunit [Veillonella atypica
KON]
gi|429177789|gb|EKY19094.1| carbamoyl-phosphate synthase, small subunit [Veillonella atypica
KON]
Length = 355
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 67/92 (72%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ GRV I++QNH +AVD ++LP +E+TH ++NDGT G+ + L
Sbjct: 264 KFGHRGSNHPVQDLRTGRVYITSQNHGFAVDDSSLPDYIEITHRSVNDGTVEGMRHKELP 323
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP D+ +F +F ++M+ K
Sbjct: 324 IFSVQYHPEASPGPTDNLYLFDEFEDMMRKGK 355
>gi|225166245|ref|ZP_03727948.1| carbamoyl-phosphate synthase, small subunit [Diplosphaera
colitermitum TAV2]
gi|224799514|gb|EEG18040.1| carbamoyl-phosphate synthase, small subunit [Diplosphaera
colitermitum TAV2]
Length = 390
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV NI+ G+V I+AQNH +A DP +L K G VT INLND T GL + L
Sbjct: 294 KFGHRGGNQPVKNIETGKVSITAQNHGFATDPKSLEKTGAIVTEINLNDNTVEGLRHKEL 353
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V +QYH EA+PGP+D+D +F DF L+ K
Sbjct: 354 PVFCVQYHPEAAPGPNDADPLFADFHALISKRK 386
>gi|169827039|ref|YP_001697197.1| carbamoylphosphate synthase small subunit [Lysinibacillus
sphaericus C3-41]
gi|168991527|gb|ACA39067.1| Carbamoyl-phosphate synthase small chain [Lysinibacillus sphaericus
C3-41]
Length = 366
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPALN 60
FGH GGNHPV +++ GR ++++QNH YA+D +L +E+THI LNDGTC G+ +
Sbjct: 268 FGHRGGNHPVKDLRTGRTDLTSQNHGYAIDIESLQDTDLELTHIALNDGTCEGVRHKKYP 327
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ ++QYH EASPGP+DS+ +F +F+E+M+
Sbjct: 328 IFTVQYHPEASPGPEDSNHLFDEFIEMME 356
>gi|365838947|ref|ZP_09380202.1| carbamoyl-phosphate synthase, small subunit [Anaeroglobus geminatus
F0357]
gi|364566156|gb|EHM43856.1| carbamoyl-phosphate synthase, small subunit [Anaeroglobus geminatus
F0357]
Length = 352
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 60/88 (68%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGH G NHPV +I+ GRV I++QNH Y +D TLP+ V VTH NL+D T G YP +
Sbjct: 263 FGHRGSNHPVKDIRTGRVYITSQNHGYVIDETTLPQDVVVTHRNLHDNTLEGFMYPRKKL 322
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMK 89
+QYH EASPGP D+ +F FVE+M+
Sbjct: 323 FCVQYHPEASPGPADNLYLFEQFVEMME 350
>gi|254293483|ref|YP_003059506.1| carbamoyl-phosphate synthase small subunit [Hirschia baltica ATCC
49814]
gi|254042014|gb|ACT58809.1| carbamoyl-phosphate synthase, small subunit [Hirschia baltica ATCC
49814]
Length = 406
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 64/87 (73%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV +++ G+VEI + NH + VDP TLP+GVE +HI+L DGT +GL ++
Sbjct: 320 GHHGANHPVKDLETGKVEIVSMNHGFTVDPDTLPEGVEQSHISLFDGTNSGLKVIGKPII 379
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMK 89
S+Q+H EASPGP DS +F+ F +LMK
Sbjct: 380 SVQHHPEASPGPQDSFYLFQRFADLMK 406
>gi|145589202|ref|YP_001155799.1| carbamoyl-phosphate synthase small subunit [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|226700916|sp|A4SXM1.1|CARA_POLSQ RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|145047608|gb|ABP34235.1| carbamoyl-phosphate synthase small subunit [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 397
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 62/92 (67%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ GRV I++QNH +AVD +TLP V VTH++L DG+ GLA+
Sbjct: 302 KFGHHGANHPVKDLDTGRVAITSQNHGFAVDASTLPANVRVTHVSLFDGSLQGLAWKDKP 361
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ Q H EASPGP D +F F+ELM + K
Sbjct: 362 AICFQGHPEASPGPHDVSYLFDRFMELMNAAK 393
>gi|379010081|ref|YP_005267893.1| carbamoyl-phosphate synthase small subunit CarA1 [Acetobacterium
woodii DSM 1030]
gi|375300870|gb|AFA47004.1| carbamoyl-phosphate synthase small subunit CarA1 [Acetobacterium
woodii DSM 1030]
Length = 372
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
K+GH G N PV ++ RV I++QNH YAV P ++ K V +VTHINLNDGTC G+ YPA+
Sbjct: 276 KYGHRGMNQPVKDLTRDRVFITSQNHGYAVVPESIAKDVGKVTHINLNDGTCEGVEYPAI 335
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ ++Q+H EAS GP+D+ +F F +LM+
Sbjct: 336 HAFTVQFHPEASAGPNDTGYLFEQFTDLME 365
>gi|348026092|ref|YP_004765897.1| carbamoyl-phosphate synthase [Megasphaera elsdenii DSM 20460]
gi|341822146|emb|CCC73070.1| carbamoyl-phosphate synthase [Megasphaera elsdenii DSM 20460]
Length = 352
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/88 (51%), Positives = 61/88 (69%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGH G NHPV +I+ GRV I++QNH Y +D A+LP V +TH NL+D T G P+ +
Sbjct: 263 FGHRGANHPVKDIRTGRVYITSQNHGYVIDEASLPDDVVITHRNLHDNTLEGFEVPSKKI 322
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMK 89
M +QYH EASPGP D+ +F FV++M+
Sbjct: 323 MCVQYHPEASPGPTDNLYLFTQFVKMME 350
>gi|344996233|ref|YP_004798576.1| carbamoyl-phosphate synthase small subunit [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964452|gb|AEM73599.1| carbamoyl-phosphate synthase, small subunit [Caldicellulosiruptor
lactoaceticus 6A]
Length = 356
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 46/91 (50%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++ +G+V I++QNHNYA++ K +++TH+N+ND T G A+ L
Sbjct: 267 KFGHHGGNHPVKDLISGKVYITSQNHNYAIEYKEYEK-IKITHVNVNDKTVEGFAHLDLP 325
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSV 91
++S+QYH EASPGP DS +F F +L+ V
Sbjct: 326 IVSVQYHPEASPGPHDSKYIFDQFTKLLNGV 356
>gi|312127412|ref|YP_003992286.1| carbamoyl-phosphate synthase, small subunit [Caldicellulosiruptor
hydrothermalis 108]
gi|311777431|gb|ADQ06917.1| carbamoyl-phosphate synthase, small subunit [Caldicellulosiruptor
hydrothermalis 108]
Length = 356
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 46/91 (50%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++ +G+V I++QNHNYA++ K +++TH+N+ND T G A+ L
Sbjct: 267 KFGHHGGNHPVKDLISGKVYITSQNHNYAIEYKEYEK-IKITHVNVNDKTVEGFAHLDLP 325
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSV 91
++S+QYH EASPGP DS +F F +L+ V
Sbjct: 326 IVSVQYHPEASPGPHDSKYIFDQFTKLLNGV 356
>gi|303231594|ref|ZP_07318318.1| carbamoyl-phosphate synthase, small subunit [Veillonella atypica
ACS-049-V-Sch6]
gi|401680272|ref|ZP_10812192.1| carbamoyl-phosphate synthase, small subunit [Veillonella sp. ACP1]
gi|302513711|gb|EFL55729.1| carbamoyl-phosphate synthase, small subunit [Veillonella atypica
ACS-049-V-Sch6]
gi|400218597|gb|EJO49472.1| carbamoyl-phosphate synthase, small subunit [Veillonella sp. ACP1]
Length = 355
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 67/92 (72%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ GRV I++QNH +AVD ++LP +E+TH ++NDGT G+ + L
Sbjct: 264 KFGHRGSNHPVQDLRTGRVYITSQNHGFAVDDSSLPDYIEITHRSVNDGTVEGMRHKELP 323
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP D+ +F +F ++M+ K
Sbjct: 324 IFSVQYHPEASPGPTDNLYLFDEFEDMMRKGK 355
>gi|423348947|ref|ZP_17326603.1| carbamoyl-phosphate synthase, small subunit [Scardovia wiggsiae
F0424]
gi|393703176|gb|EJD65377.1| carbamoyl-phosphate synthase, small subunit [Scardovia wiggsiae
F0424]
Length = 376
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ GRVEI+AQNH Y+VD +L G+EVTH +LND TC G+ +
Sbjct: 264 KFGHRGSNHPVKNLSTGRVEITAQNHGYSVDIGSLAGTGLEVTHESLNDKTCEGVRHQEF 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
V S+QYH EAS GP DS+ +F +F+ LM
Sbjct: 324 PVFSVQYHPEASSGPHDSNYLFDEFIALM 352
>gi|296133334|ref|YP_003640581.1| carbamoyl-phosphate synthase small subunit [Thermincola potens JR]
gi|296031912|gb|ADG82680.1| carbamoyl-phosphate synthase, small subunit [Thermincola potens JR]
Length = 359
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 69/95 (72%), Gaps = 3/95 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV ++ G+V I++QNH YAVD +L K +EV+HIN+NDGT GL + +
Sbjct: 266 KFGHRGANHPVKDLATGKVHITSQNHGYAVDGDSLTDKDLEVSHINMNDGTVEGLRHKTM 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
V S+QYH EA+PGP DS+ +F F++LM+ K+R
Sbjct: 326 PVFSVQYHPEAAPGPWDSEYLFNQFLDLME--KWR 358
>gi|312135337|ref|YP_004002675.1| carbamoyl-phosphate synthase, small subunit [Caldicellulosiruptor
owensensis OL]
gi|311775388|gb|ADQ04875.1| carbamoyl-phosphate synthase, small subunit [Caldicellulosiruptor
owensensis OL]
Length = 356
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/91 (49%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++ +G+V I++QNHNYA++ + +++TH+N+ND T G A+ L
Sbjct: 267 KFGHHGGNHPVKDLTSGKVYITSQNHNYAIEYKEYER-IKITHVNVNDKTVEGFAHLDLP 325
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSV 91
++S+QYH EASPGP DS +F F +L+ V
Sbjct: 326 IVSVQYHPEASPGPHDSKYIFDQFTKLLNGV 356
>gi|294790944|ref|ZP_06756102.1| carbamoyl-phosphate synthase, small subunit [Scardovia inopinata
F0304]
gi|294458841|gb|EFG27194.1| carbamoyl-phosphate synthase, small subunit [Scardovia inopinata
F0304]
Length = 389
Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ GRVEI+ QNH +AVD A+L +E+TH +LNDG C G+ + +L
Sbjct: 278 KFGHRGANHPVKNLATGRVEITTQNHGFAVDSASLEGTPLELTHQSLNDGACEGVRHRSL 337
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
V S+QYH EA+ GP DS+ +F DF++LM R
Sbjct: 338 PVFSVQYHPEANGGPHDSNYLFDDFIDLMDKTSGR 372
>gi|222529529|ref|YP_002573411.1| carbamoyl-phosphate synthase small subunit [Caldicellulosiruptor
bescii DSM 6725]
gi|222456376|gb|ACM60638.1| carbamoyl-phosphate synthase, small subunit [Caldicellulosiruptor
bescii DSM 6725]
Length = 356
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/91 (50%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++ +G+V I++QNHNYA++ K +++TH+N+ND T G A+ L
Sbjct: 267 KFGHHGGNHPVKDLISGKVYITSQNHNYAIEYKEYEK-IKITHVNVNDKTVEGFAHLDLP 325
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSV 91
++S+QYH EASPGP DS +F F +L+ V
Sbjct: 326 IVSVQYHPEASPGPHDSKYIFDQFTKLLNGV 356
>gi|210623370|ref|ZP_03293767.1| hypothetical protein CLOHIR_01717 [Clostridium hiranonis DSM 13275]
gi|210153631|gb|EEA84637.1| hypothetical protein CLOHIR_01717 [Clostridium hiranonis DSM 13275]
Length = 365
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/92 (47%), Positives = 61/92 (66%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K+GH GGN PV ++ GR+ +S+QNH YAVD LPK E+ N+NDGTC G+ Y +
Sbjct: 273 KYGHRGGNQPVKDLSTGRIYVSSQNHGYAVDNDELPKNAELLFTNVNDGTCEGIKYTDMP 332
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+Q+H EA GP D+ +F F+ LM+ V+
Sbjct: 333 VFSVQFHPEACGGPQDTAYLFDRFISLMEGVE 364
>gi|146297225|ref|YP_001180996.1| carbamoyl-phosphate synthase small subunit [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410801|gb|ABP67805.1| carbamoyl-phosphate synthase, small subunit [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 356
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 47/91 (51%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++ G+V I++QNHNYA++ K +++THIN+ND T G A+ L
Sbjct: 267 KFGHHGGNHPVKDLTTGKVYITSQNHNYAIEYKEYDK-IKITHINVNDKTVEGFAHLDLP 325
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSV 91
++S+QYH EASPGP DS VF + +L+ V
Sbjct: 326 IVSVQYHPEASPGPHDSKYVFDQYTKLLNGV 356
>gi|303230225|ref|ZP_07316993.1| carbamoyl-phosphate synthase, small subunit [Veillonella atypica
ACS-134-V-Col7a]
gi|302515151|gb|EFL57125.1| carbamoyl-phosphate synthase, small subunit [Veillonella atypica
ACS-134-V-Col7a]
Length = 355
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 67/92 (72%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ GRV I++QNH +AVD ++LP +E+TH ++NDGT G+ + L
Sbjct: 264 KFGHRGSNHPVQDLRTGRVYITSQNHGFAVDDSSLPDYIEITHRSVNDGTVEGMRHKELP 323
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP D+ +F +F ++M+ K
Sbjct: 324 IFSVQYHPEASPGPTDNLYLFDEFEDMMRKGK 355
>gi|253828181|ref|ZP_04871066.1| carbamoyl-phosphate synthase small subunit [Helicobacter canadensis
MIT 98-5491]
gi|313142349|ref|ZP_07804542.1| carbamoyl-phosphate synthase small chain protein [Helicobacter
canadensis MIT 98-5491]
gi|253511587|gb|EES90246.1| carbamoyl-phosphate synthase small subunit [Helicobacter canadensis
MIT 98-5491]
gi|313131380|gb|EFR48997.1| carbamoyl-phosphate synthase small chain protein [Helicobacter
canadensis MIT 98-5491]
Length = 380
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N+ +VEI+AQNHNY+V P ++ + EVTH NL DGT GL Y
Sbjct: 289 KFGHHGGNHPVKNLLTNQVEITAQNHNYSV-PESIQEIAEVTHRNLFDGTIEGLRYKNAL 347
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ SLQ+H EA PGP +S +F +F +L++ K
Sbjct: 348 ICSLQHHPEAGPGPSESTALFSEFAKLIEESK 379
>gi|312622241|ref|YP_004023854.1| carbamoyl-phosphate synthase, small subunit [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202708|gb|ADQ46035.1| carbamoyl-phosphate synthase, small subunit [Caldicellulosiruptor
kronotskyensis 2002]
Length = 356
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/91 (50%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++ +G+V I++QNHNYA++ K +++TH+N+ND T G A+ L
Sbjct: 267 KFGHHGGNHPVKDLISGKVYITSQNHNYAIEYKEYEK-IKITHVNVNDKTVEGFAHLDLP 325
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSV 91
++S+QYH EASPGP DS +F F +L+ V
Sbjct: 326 IVSVQYHPEASPGPHDSKYIFDQFTKLLNGV 356
>gi|153853363|ref|ZP_01994772.1| hypothetical protein DORLON_00761 [Dorea longicatena DSM 13814]
gi|149754149|gb|EDM64080.1| carbamoyl-phosphate synthase, small subunit [Dorea longicatena DSM
13814]
Length = 370
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/93 (51%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
K+GH GGNHPV ++ N RV IS+QNH YAVD T+ P + IN+NDGT GLAY
Sbjct: 278 KYGHRGGNHPVKDLTNNRVYISSQNHGYAVDGTTIDPAIAKEAFINVNDGTNEGLAYEGK 337
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
N+ ++Q+H EA PGP DS +F F+++MK K
Sbjct: 338 NIFTVQFHPEACPGPQDSGYLFDRFMDMMKGAK 370
>gi|340027574|ref|ZP_08663637.1| carbamoyl phosphate synthase small subunit [Paracoccus sp. TRP]
Length = 382
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 47/88 (53%), Positives = 61/88 (69%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV +++ G+VEI++ NH +AVD TLPKGV TH++L DG+ GL V
Sbjct: 292 GHHGANHPVKDVETGKVEITSMNHGFAVDAQTLPKGVIETHVSLFDGSNCGLRVADKPVF 351
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+QYH EASPGP DS +F F E M++
Sbjct: 352 SVQYHPEASPGPQDSAYLFERFTEAMRA 379
>gi|149200298|ref|ZP_01877318.1| carbamoyl-phosphate synthase, small subunit [Lentisphaera araneosa
HTCC2155]
gi|149136595|gb|EDM25028.1| carbamoyl-phosphate synthase, small subunit [Lentisphaera araneosa
HTCC2155]
Length = 386
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 47/93 (50%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
KFGHHG NHPV N+ G +EIS+QNHN+A+DP ++ + +EVTHINLND T AG+ + +
Sbjct: 294 KFGHHGCNHPVKNLLKGTIEISSQNHNFAIDPDSINDELIEVTHINLNDDTVAGIRHKSE 353
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ ++QYH EA+PGP D +F F ++ S K
Sbjct: 354 KMFAVQYHPEAAPGPHDPFYLFEQFYSMVDSDK 386
>gi|418634111|ref|ZP_13196509.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU129]
gi|420189625|ref|ZP_14695593.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM037]
gi|420204124|ref|ZP_14709684.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM015]
gi|374838103|gb|EHS01660.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU129]
gi|394260960|gb|EJE05762.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM037]
gi|394274138|gb|EJE18563.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM015]
Length = 366
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G+++I++QNH Y++D +L +EVTHI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKDLRTGKIDITSQNHGYSIDRDSLKNTDLEVTHIALNDGTVEGLRHKEL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F +F+ +MK K +
Sbjct: 326 PAFSVQYHPEARPGPSDSNYLFDEFITMMKDFKEK 360
>gi|323702042|ref|ZP_08113710.1| carbamoyl-phosphate synthase, small subunit [Desulfotomaculum
nigrificans DSM 574]
gi|333923454|ref|YP_004497034.1| carbamoyl-phosphate synthase small subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323532924|gb|EGB22795.1| carbamoyl-phosphate synthase, small subunit [Desulfotomaculum
nigrificans DSM 574]
gi|333749015|gb|AEF94122.1| carbamoyl-phosphate synthase, small subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 354
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 62/85 (72%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV ++ GRV I++QNH +AVD +LP VEV+HINLND T GL + +L
Sbjct: 266 KFGHRGANHPVKDLATGRVFITSQNHGFAVDRQSLPPDVEVSHINLNDNTVEGLRHKSLP 325
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFV 85
V S+QYH EA+PGP DS+ +F F+
Sbjct: 326 VFSVQYHPEAAPGPMDSEYLFDQFL 350
>gi|291287473|ref|YP_003504289.1| carbamoyl-phosphate synthase small subunit [Denitrovibrio
acetiphilus DSM 12809]
gi|290884633|gb|ADD68333.1| carbamoyl-phosphate synthase, small subunit [Denitrovibrio
acetiphilus DSM 12809]
Length = 372
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 64/92 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGN PV +++ G+VEI+ QNH +AVD +L VEVTH+NLND T GL +
Sbjct: 281 KFGHHGGNQPVKDLETGKVEITPQNHCFAVDVDSLGDRVEVTHVNLNDNTVEGLRHKDYP 340
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH E PGP D+ +F+ F+E++ + K
Sbjct: 341 LFSVQYHPENGPGPQDAAYLFKRFIEMIDNNK 372
>gi|403667688|ref|ZP_10932988.1| carbamoylphosphate synthase small subunit [Kurthia sp. JC8E]
Length = 367
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ R E+++QNH YAVD +L +EVTH+ LNDGTC GL +
Sbjct: 267 KFGHRGANHPVKDLRTDRTELTSQNHGYAVDMDSLAATDLEVTHVALNDGTCEGLRHKTA 326
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
++QYH EASPGP+D + +F +F+ELMK+
Sbjct: 327 PAFTVQYHPEASPGPEDPNHLFDEFIELMKN 357
>gi|418411622|ref|ZP_12984889.1| carbamoyl-phosphate synthase small chain [Staphylococcus
epidermidis BVS058A4]
gi|410892348|gb|EKS40142.1| carbamoyl-phosphate synthase small chain [Staphylococcus
epidermidis BVS058A4]
Length = 366
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G+++I++QNH Y++D +L +EVTHI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKDLRTGKIDITSQNHGYSIDRDSLKNTDLEVTHIALNDGTVEGLRHKKL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F +F+ +MK K +
Sbjct: 326 PAFSVQYHPEARPGPSDSNYLFDEFIAMMKDFKEK 360
>gi|283782353|ref|YP_003373108.1| carbamoyl-phosphate synthase small subunit [Pirellula staleyi DSM
6068]
gi|283440806|gb|ADB19248.1| carbamoyl-phosphate synthase, small subunit [Pirellula staleyi DSM
6068]
Length = 383
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 59/88 (67%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV N+ G++EI++QNH +AVD TLP +EVTH NLND T AGL +
Sbjct: 286 KFGHRGANQPVQNLLTGKIEITSQNHGFAVDDTTLPACLEVTHRNLNDNTVAGLRHKEFP 345
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH E+S GP DS +FR F E M
Sbjct: 346 AFSVQYHPESSAGPHDSRYLFRQFREQM 373
>gi|417910707|ref|ZP_12554423.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU105]
gi|418622047|ref|ZP_13184803.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU123]
gi|418628902|ref|ZP_13191418.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU127]
gi|420185493|ref|ZP_14691585.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM040]
gi|420187592|ref|ZP_14693612.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM039]
gi|420211906|ref|ZP_14717262.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM001]
gi|341654895|gb|EGS78631.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU105]
gi|374827422|gb|EHR91284.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU123]
gi|374834896|gb|EHR98527.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU127]
gi|394254479|gb|EJD99448.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM040]
gi|394256034|gb|EJE00970.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM039]
gi|394280416|gb|EJE24697.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM001]
Length = 366
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G+++I++QNH Y++D +L +EVTHI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKDLRTGKIDITSQNHGYSIDRDSLKNTDLEVTHIALNDGTVEGLRHKEL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F +F+ +MK K +
Sbjct: 326 PAFSVQYHPEARPGPSDSNYLFDEFIAMMKDFKEK 360
>gi|85712940|ref|ZP_01043980.1| Carbamoylphosphate synthase small subunit [Idiomarina baltica
OS145]
gi|85693246|gb|EAQ31204.1| Carbamoylphosphate synthase small subunit [Idiomarina baltica
OS145]
Length = 381
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 62/90 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV +++ RV I++QNH +A+D +LP +EVTH++L DGT G+
Sbjct: 290 KFGHHGANHPVQDVRTKRVMITSQNHGFAIDETSLPDNIEVTHVSLFDGTLQGMRRTDKP 349
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D+D +F F+ELM++
Sbjct: 350 AFSFQGHPEASPGPHDADALFDHFIELMQA 379
>gi|420163458|ref|ZP_14670205.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM095]
gi|420167559|ref|ZP_14674211.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM087]
gi|394235147|gb|EJD80721.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM095]
gi|394237587|gb|EJD83073.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM087]
Length = 366
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G+++I++QNH Y++D +L +EVTHI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKDLRTGKIDITSQNHGYSIDRDSLKNTDLEVTHIALNDGTVEGLRHKEL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F +F+ +MK K +
Sbjct: 326 PAFSVQYHPEARPGPSDSNYLFDEFIAMMKDFKEK 360
>gi|39934351|ref|NP_946627.1| carbamoyl phosphate synthase small subunit [Rhodopseudomonas
palustris CGA009]
gi|192289880|ref|YP_001990485.1| carbamoyl phosphate synthase small subunit [Rhodopseudomonas
palustris TIE-1]
gi|39648200|emb|CAE26719.1| carbamoyl-phosphate synthase small subunit [Rhodopseudomonas
palustris CGA009]
gi|192283629|gb|ACF00010.1| carbamoyl-phosphate synthase, small subunit [Rhodopseudomonas
palustris TIE-1]
Length = 397
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 48/93 (51%), Positives = 64/93 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI++ NH +AVD +TLP V+ THI+L D + G+A V
Sbjct: 305 GHHGANHPVKDLTTGKVEITSMNHGFAVDKSTLPANVQQTHISLFDDSNCGIALADKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EASPGP DS +FR F +LM++ K A
Sbjct: 365 SVQYHPEASPGPQDSHYLFRRFTDLMRAKKAAA 397
>gi|429736191|ref|ZP_19270108.1| carbamoyl-phosphate synthase, small subunit [Selenomonas sp. oral
taxon 138 str. F0429]
gi|429156097|gb|EKX98738.1| carbamoyl-phosphate synthase, small subunit [Selenomonas sp. oral
taxon 138 str. F0429]
Length = 357
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV N++ G+V ISAQNH YAVDP +L + VTH N+ND T GL + L
Sbjct: 266 KFGHRGGNQPVKNLKMGKVHISAQNHGYAVDPTSLAGTPLAVTHTNVNDDTIEGLRHTGL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+QYH EA+PGPDD+ +F +F LMK
Sbjct: 326 PIFSVQYHPEAAPGPDDNMYLFDEFWNLMK 355
>gi|346309566|ref|ZP_08851650.1| carbamoyl-phosphate synthase, small subunit [Dorea formicigenerans
4_6_53AFAA]
gi|345898695|gb|EGX68560.1| carbamoyl-phosphate synthase, small subunit [Dorea formicigenerans
4_6_53AFAA]
Length = 401
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 49/93 (52%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
K+GH GGNHPV ++ GRV IS+QNH YAVD T+ K V E IN+NDGT GL Y
Sbjct: 309 KYGHRGGNHPVKDLSTGRVYISSQNHGYAVDYNTMDKNVAEEAFINVNDGTNEGLNYIGK 368
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ ++Q+H EA PGP DS +F F+E+MK K
Sbjct: 369 KIYTVQFHPEACPGPQDSTFLFDRFIEMMKGDK 401
>gi|416124394|ref|ZP_11595390.1| carbamoyl-phosphate synthase pyrimidine-specific small chain
[Staphylococcus epidermidis FRI909]
gi|319401504|gb|EFV89714.1| carbamoyl-phosphate synthase pyrimidine-specific small chain
[Staphylococcus epidermidis FRI909]
Length = 366
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 46/95 (48%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G+++I++QNH Y++D +L +EVTHI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKDLRTGKIDITSQNHGYSIDRDSLKNTDLEVTHIALNDGTVEGLRHKEL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F +F+ +MK K +
Sbjct: 326 PAFSVQYHPEARPGPSDSNYLFDEFITMMKDFKEK 360
>gi|166030994|ref|ZP_02233823.1| hypothetical protein DORFOR_00675 [Dorea formicigenerans ATCC
27755]
gi|166029261|gb|EDR48018.1| carbamoyl-phosphate synthase, small subunit [Dorea formicigenerans
ATCC 27755]
Length = 401
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 49/93 (52%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
K+GH GGNHPV ++ GRV IS+QNH YAVD T+ K V E IN+NDGT GL Y
Sbjct: 309 KYGHRGGNHPVKDLSTGRVYISSQNHGYAVDYNTMDKNVAEEAFINVNDGTNEGLNYIGK 368
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ ++Q+H EA PGP DS +F F+E+MK K
Sbjct: 369 KIYTVQFHPEACPGPQDSTFLFDRFIEMMKGDK 401
>gi|435853512|ref|YP_007314831.1| carbamoyl-phosphate synthase, small subunit [Halobacteroides
halobius DSM 5150]
gi|433669923|gb|AGB40738.1| carbamoyl-phosphate synthase, small subunit [Halobacteroides
halobius DSM 5150]
Length = 359
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 63/89 (70%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV +++ GRV I++QNH YA+ +L + + VTH NLND T GL + L
Sbjct: 266 KFGHRGSNQPVKDLETGRVYITSQNHGYALKEDSLSQDIIVTHRNLNDDTVEGLKHKNLP 325
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+QYH EA+PGP DS +F+DF+E+MK
Sbjct: 326 IFSVQYHPEAAPGPMDSKYIFKDFLEVMK 354
>gi|414160486|ref|ZP_11416752.1| carbamoyl-phosphate synthase small chain [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410878006|gb|EKS25895.1| carbamoyl-phosphate synthase small chain [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 366
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV ++ G++ +++QNH YA+D A++ +EVTHI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKDLATGKIALTSQNHGYAIDEASVAHTDLEVTHIALNDGTVEGLKHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F F+++MK K +
Sbjct: 326 PAFSVQYHPEACPGPTDSNYLFDQFIDMMKEFKAK 360
>gi|384430308|ref|YP_005639668.1| carbamoyl-phosphate synthase small subunit [Thermus thermophilus
SG0.5JP17-16]
gi|333965776|gb|AEG32541.1| carbamoyl-phosphate synthase, small subunit [Thermus thermophilus
SG0.5JP17-16]
Length = 391
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 48/86 (55%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV N+Q G++EI++QNH YAVD +L K TH+NLNDGT G+A+
Sbjct: 284 KFGHRGANHPVKNLQTGKIEITSQNHGYAVDIDSL-KDFRPTHVNLNDGTLEGMAHARYP 342
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
V S+QYH EA+PGP D+ +FR F+E
Sbjct: 343 VFSVQYHPEAAPGPHDALYLFRRFLE 368
>gi|57866725|ref|YP_188351.1| carbamoyl phosphate synthase small subunit [Staphylococcus
epidermidis RP62A]
gi|242242484|ref|ZP_04796929.1| carbamoyl phosphate synthase small subunit [Staphylococcus
epidermidis W23144]
gi|418329217|ref|ZP_12940296.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis 14.1.R1.SE]
gi|418612976|ref|ZP_13175997.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU117]
gi|418613995|ref|ZP_13176985.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU118]
gi|418626759|ref|ZP_13189355.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU126]
gi|418631956|ref|ZP_13194400.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU128]
gi|420175029|ref|ZP_14681474.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM061]
gi|420177407|ref|ZP_14683743.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM057]
gi|420179249|ref|ZP_14685544.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM053]
gi|420192775|ref|ZP_14698632.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM023]
gi|81674933|sp|Q5HPY9.1|CARA_STAEQ RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|57637383|gb|AAW54171.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis RP62A]
gi|242234058|gb|EES36370.1| carbamoyl phosphate synthase small subunit [Staphylococcus
epidermidis W23144]
gi|365230879|gb|EHM71954.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis 14.1.R1.SE]
gi|374817286|gb|EHR81471.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU117]
gi|374821864|gb|EHR85905.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU118]
gi|374831303|gb|EHR95045.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU126]
gi|374833625|gb|EHR97300.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU128]
gi|394244315|gb|EJD89660.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM061]
gi|394247791|gb|EJD93033.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM057]
gi|394254055|gb|EJD99037.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM053]
gi|394260591|gb|EJE05400.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM023]
Length = 366
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 46/95 (48%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G+++I++QNH Y++D +L +EVTHI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKDLRTGKIDITSQNHGYSIDRDSLKNTDLEVTHIALNDGTVEGLRHKEL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F +F+ +MK K +
Sbjct: 326 PAFSVQYHPEARPGPSDSNYLFDEFITMMKDFKEK 360
>gi|386855606|ref|YP_006259783.1| carbamoyl-phosphate synthase small chain [Deinococcus gobiensis
I-0]
gi|379999135|gb|AFD24325.1| Carbamoyl-phosphate synthase small chain [Deinococcus gobiensis
I-0]
Length = 394
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEV-THINLNDGTCAGLAYPAL 59
KFGH GGN PV N+ G VEI++QNH YAVD ++P G V TH+NLNDGT G+A+
Sbjct: 285 KFGHRGGNQPVKNLLTGNVEITSQNHGYAVDIDSIPNGAFVATHVNLNDGTLEGMAHSRY 344
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVE 86
V S+QYH EASPGP DS +F F+E
Sbjct: 345 PVFSVQYHPEASPGPHDSRYLFDRFIE 371
>gi|238926953|ref|ZP_04658713.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Selenomonas
flueggei ATCC 43531]
gi|238885187|gb|EEQ48825.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Selenomonas
flueggei ATCC 43531]
Length = 357
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV N++ RV ISAQNH YAVDPA+L + +TH N+ND T GL + +L
Sbjct: 266 KFGHRGGNQPVKNLRMNRVHISAQNHGYAVDPASLEGTPLVITHTNVNDDTVEGLRHTSL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+QYH EA+PGPDD+ +F +F LMK
Sbjct: 326 PIFSVQYHPEAAPGPDDNMYLFDEFWALMK 355
>gi|15805711|ref|NP_294407.1| carbamoyl phosphate synthase small subunit [Deinococcus radiodurans
R1]
gi|21759062|sp|Q9RWI4.1|CARA_DEIRA RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|6458387|gb|AAF10261.1|AE001925_4 carbamoyl-phosphate synthase, small subunit [Deinococcus
radiodurans R1]
Length = 394
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEV-THINLNDGTCAGLAYPAL 59
KFGH GGN PV N+ G VEI++QNH YAVD ++P G V TH+NLNDGT G+A+
Sbjct: 285 KFGHRGGNQPVKNLLTGNVEITSQNHGYAVDLDSIPNGAFVATHVNLNDGTLEGMAHSRY 344
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVE 86
V S+QYH EASPGP DS +F F+E
Sbjct: 345 PVFSVQYHPEASPGPHDSRYLFDRFIE 371
>gi|226354895|ref|YP_002784635.1| carbamoyl phosphate synthase small subunit [Deinococcus deserti
VCD115]
gi|226316885|gb|ACO44881.1| putative Carbamoyl-phosphate synthase small chain (Carbamoyl-
phosphate synthetase glutamine chain) [Deinococcus
deserti VCD115]
Length = 399
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEV-THINLNDGTCAGLAYPAL 59
KFGH GGN PV N+ G VEI++QNH YAVD ++P G V TH+NLNDGT G+A+
Sbjct: 290 KFGHRGGNQPVKNLLTGNVEITSQNHGYAVDIDSIPNGAFVATHVNLNDGTLEGMAHSRY 349
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVE 86
V S+QYH EASPGP DS +F F+E
Sbjct: 350 PVFSVQYHPEASPGPHDSRYLFDRFIE 376
>gi|418325064|ref|ZP_12936274.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU071]
gi|365228970|gb|EHM70142.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU071]
Length = 366
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G+++I++QNH Y++D +L +EVTHI LNDGT GL + L
Sbjct: 266 KFGHRGTNHPVKDLRTGKIDITSQNHGYSIDRDSLKNTDLEVTHIALNDGTVEGLRHKEL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F +F+ +MK K +
Sbjct: 326 PAFSVQYHPEARPGPSDSNYLFDEFIAMMKDFKEK 360
>gi|217968163|ref|YP_002353669.1| carbamoyl-phosphate synthase small subunit [Dictyoglomus turgidum
DSM 6724]
gi|217337262|gb|ACK43055.1| carbamoyl-phosphate synthase, small subunit [Dictyoglomus turgidum
DSM 6724]
Length = 358
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 43/87 (49%), Positives = 63/87 (72%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV+++ +GR I++QNH+YA+D TLPKG EV + NLND T G+ + L
Sbjct: 270 KFGHRGANHPVYHVDSGRTYITSQNHSYAIDERTLPKGFEVNYYNLNDHTVEGIKHNFLP 329
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVEL 87
++++Q+H EASPGP D+ +F ++ L
Sbjct: 330 LVAVQFHPEASPGPWDTKFIFEEYYRL 356
>gi|223043724|ref|ZP_03613767.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus capitis
SK14]
gi|417907108|ref|ZP_12550884.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus capitis
VCU116]
gi|222442821|gb|EEE48923.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus capitis
SK14]
gi|341596739|gb|EGS39330.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus capitis
VCU116]
Length = 366
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G+V+I++QNH YA+D +L +EVTHI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKDLRTGKVDITSQNHGYAIDRDSLENTDLEVTHIALNDGTVEGLRHKQL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F +F+ +M K +
Sbjct: 326 PAFSVQYHPEARPGPSDSNYLFDEFITMMNEFKEK 360
>gi|225570404|ref|ZP_03779429.1| hypothetical protein CLOHYLEM_06504 [Clostridium hylemonae DSM
15053]
gi|225160775|gb|EEG73394.1| hypothetical protein CLOHYLEM_06504 [Clostridium hylemonae DSM
15053]
Length = 356
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
K+GH GGNHPV ++ N RV IS+QNH YAVD +++ P E +N+NDGT GL+Y
Sbjct: 264 KYGHRGGNHPVKDLSNNRVYISSQNHGYAVDGSSMDPAVAEEAFVNVNDGTNEGLSYTGK 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
N+ ++Q+H EA PGP DS +F F+++MK K
Sbjct: 324 NIFTVQFHPEACPGPQDSGYLFDRFMDMMKGAK 356
>gi|212218698|ref|YP_002305485.1| carbamoyl phosphate synthase small subunit [Coxiella burnetii
CbuK_Q154]
gi|212012960|gb|ACJ20340.1| carbamoyl-phosphate synthase small chain [Coxiella burnetii
CbuK_Q154]
Length = 402
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 62/89 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ GRV I++QNH+++VD +LP + VTH +L DGT G+A+
Sbjct: 311 KFGHHGANHPVQAVETGRVFITSQNHSFSVDENSLPATLRVTHRSLFDGTLQGIAHKTKP 370
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++ Q H EASPGP D VF +FV+LM+
Sbjct: 371 AIAFQGHPEASPGPHDMRGVFEEFVKLMR 399
>gi|209364055|ref|YP_001424723.2| carbamoyl phosphate synthase small subunit [Coxiella burnetii
Dugway 5J108-111]
gi|207081988|gb|ABS78436.2| carbamoyl-phosphate synthase small chain [Coxiella burnetii Dugway
5J108-111]
Length = 402
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 62/89 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ GRV I++QNH+++VD +LP + VTH +L DGT G+A+
Sbjct: 311 KFGHHGANHPVQAVETGRVFITSQNHSFSVDENSLPATLRVTHRSLFDGTLQGIAHKTKP 370
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++ Q H EASPGP D VF +FV+LM+
Sbjct: 371 AIAFQGHPEASPGPHDMRGVFEEFVKLMR 399
>gi|417859413|ref|ZP_12504469.1| carbamoyl phosphate synthase small subunit [Agrobacterium
tumefaciens F2]
gi|338822477|gb|EGP56445.1| carbamoyl phosphate synthase small subunit [Agrobacterium
tumefaciens F2]
Length = 387
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 48/87 (55%), Positives = 59/87 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE THI+L DGT GL V
Sbjct: 290 GHHGANHPVKDFTTGKVEIVSMNHGFAVDTKSLPDGVEETHISLFDGTNCGLRIVGKPVF 349
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMK 89
S+Q+H EASPGP DS +FR FV L++
Sbjct: 350 SVQHHPEASPGPQDSHYLFRRFVNLLR 376
>gi|159185084|ref|NP_355130.2| carbamoylphosphate synthase small chain [Agrobacterium fabrum str.
C58]
gi|21759029|sp|Q8UDF7.2|CARA_AGRT5 RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|159140357|gb|AAK87915.2| carbamoylphosphate synthase small chain [Agrobacterium fabrum str.
C58]
Length = 401
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 49/93 (52%), Positives = 61/93 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+GVE TH +L DGT GL V
Sbjct: 304 GHHGANHPVKDFTTGKVEIVSMNHGFAVDTKSLPEGVEETHTSLFDGTNCGLRIVGKPVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR FV L++ K A
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFVNLLRENKGEA 396
>gi|297623497|ref|YP_003704931.1| carbamoyl-phosphate synthase small subunit [Truepera radiovictrix
DSM 17093]
gi|297164677|gb|ADI14388.1| carbamoyl-phosphate synthase, small subunit [Truepera radiovictrix
DSM 17093]
Length = 383
Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
K GHHG N PV N+ G VEI++QNHNYAVD ++P G THINLNDGT G+A+
Sbjct: 277 KHGHHGANTPVKNLVTGEVEITSQNHNYAVDIGSIPGGQFRATHINLNDGTLEGMAHTRY 336
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVE 86
V S+QYH EASPGP D+ FR F+E
Sbjct: 337 PVYSVQYHPEASPGPHDASYSFRRFIE 363
>gi|212212331|ref|YP_002303267.1| carbamoyl phosphate synthase small subunit [Coxiella burnetii
CbuG_Q212]
gi|212010741|gb|ACJ18122.1| carbamoyl-phosphate synthase small chain [Coxiella burnetii
CbuG_Q212]
Length = 402
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 62/89 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ GRV I++QNH+++VD +LP + VTH +L DGT G+A+
Sbjct: 311 KFGHHGANHPVQAVETGRVFITSQNHSFSVDENSLPATLRVTHRSLFDGTLQGIAHKTKP 370
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++ Q H EASPGP D VF +FV+LM+
Sbjct: 371 AIAFQGHPEASPGPHDMRGVFEEFVKLMR 399
>gi|251810632|ref|ZP_04825105.1| carbamoyl phosphate synthase small subunit [Staphylococcus
epidermidis BCM-HMP0060]
gi|282876366|ref|ZP_06285233.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis SK135]
gi|417913395|ref|ZP_12557062.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU109]
gi|418624487|ref|ZP_13187162.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU125]
gi|420169746|ref|ZP_14676324.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM070]
gi|420172797|ref|ZP_14679295.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM067]
gi|420209518|ref|ZP_14714955.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM003]
gi|420234361|ref|ZP_14738925.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIH051475]
gi|421607296|ref|ZP_16048542.1| carbamoyl phosphate synthase small subunit [Staphylococcus
epidermidis AU12-03]
gi|251805792|gb|EES58449.1| carbamoyl phosphate synthase small subunit [Staphylococcus
epidermidis BCM-HMP0060]
gi|281295391|gb|EFA87918.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis SK135]
gi|341655677|gb|EGS79401.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU109]
gi|374827716|gb|EHR91577.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU125]
gi|394241474|gb|EJD86888.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM067]
gi|394243046|gb|EJD88420.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM070]
gi|394278965|gb|EJE23277.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM003]
gi|394304323|gb|EJE47729.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIH051475]
gi|406657088|gb|EKC83481.1| carbamoyl phosphate synthase small subunit [Staphylococcus
epidermidis AU12-03]
Length = 366
Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G+++I++QNH Y++D +L +EVTHI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKDLRTGKIDITSQNHGYSIDCDSLKNTDLEVTHIALNDGTVEGLRHKEL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F +F+ +MK K +
Sbjct: 326 PAFSVQYHPEARPGPSDSNYLFDEFIAMMKDFKEK 360
>gi|384109016|ref|ZP_10009902.1| carbamoyl-phosphate synthase, small subunit [Treponema sp. JC4]
gi|383869460|gb|EID85073.1| carbamoyl-phosphate synthase, small subunit [Treponema sp. JC4]
Length = 437
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 46/93 (49%), Positives = 61/93 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K+GH GGN PV ++ GRV IS+QNH YAV TLP G ++ +N NDGTC GLAY +
Sbjct: 317 KYGHRGGNQPVKYLKTGRVYISSQNHGYAVKNDTLPAGAVLSFVNTNDGTCEGLAYTNVP 376
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKY 93
S+Q+H EA GP D+ +F +FV+L+ Y
Sbjct: 377 AFSVQFHPEACSGPLDTSFLFDEFVKLINDHNY 409
>gi|304436901|ref|ZP_07396865.1| carbamoyl-phosphate synthase, small subunit [Selenomonas sp. oral
taxon 149 str. 67H29BP]
gi|304370100|gb|EFM23761.1| carbamoyl-phosphate synthase, small subunit [Selenomonas sp. oral
taxon 149 str. 67H29BP]
Length = 357
Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV N++ RV ISAQNH YAVDPA+L + +TH N+ND T GL + +L
Sbjct: 266 KFGHRGGNQPVKNLRMNRVHISAQNHGYAVDPASLEGTPLFITHTNVNDDTVEGLRHTSL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+QYH EA+PGPDD+ +F +F LMK
Sbjct: 326 PIFSVQYHPEAAPGPDDNMYLFDEFWALMK 355
>gi|218296119|ref|ZP_03496888.1| glutamine amidotransferase class-I [Thermus aquaticus Y51MC23]
gi|218243496|gb|EED10025.1| glutamine amidotransferase class-I [Thermus aquaticus Y51MC23]
Length = 221
Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV N+Q G++EI++QNH YAVD +L K THINLNDGT G+A+
Sbjct: 114 KFGHRGANHPVKNLQTGKIEITSQNHGYAVDIDSL-KEFRPTHINLNDGTLEGMAHARYP 172
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
V S+QYH EA+PGP D+ +FR F+E
Sbjct: 173 VFSVQYHPEAAPGPHDALYLFRRFLE 198
>gi|27467796|ref|NP_764433.1| carbamoyl phosphate synthase small subunit [Staphylococcus
epidermidis ATCC 12228]
gi|293366833|ref|ZP_06613509.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis M23864:W2(grey)]
gi|417645985|ref|ZP_12295870.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU144]
gi|417656679|ref|ZP_12306362.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU028]
gi|417658954|ref|ZP_12308567.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU045]
gi|417909849|ref|ZP_12553582.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU037]
gi|418605441|ref|ZP_13168766.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU041]
gi|418606363|ref|ZP_13169644.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU057]
gi|418609823|ref|ZP_13172957.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU065]
gi|418616521|ref|ZP_13179445.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU120]
gi|418664734|ref|ZP_13226200.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU081]
gi|419768615|ref|ZP_14294731.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-250]
gi|419772582|ref|ZP_14298613.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-K]
gi|420165259|ref|ZP_14671963.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM088]
gi|420182872|ref|ZP_14689005.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM049]
gi|420194060|ref|ZP_14699889.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM021]
gi|420197094|ref|ZP_14702818.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM020]
gi|420202083|ref|ZP_14707678.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM018]
gi|420206477|ref|ZP_14711987.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM008]
gi|420214317|ref|ZP_14719596.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIH05005]
gi|420216147|ref|ZP_14721369.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIH05001]
gi|420219983|ref|ZP_14724973.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIH04008]
gi|420222006|ref|ZP_14726931.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIH08001]
gi|420224868|ref|ZP_14729706.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIH06004]
gi|420226993|ref|ZP_14731766.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIH05003]
gi|420229315|ref|ZP_14734021.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIH04003]
gi|420231674|ref|ZP_14736319.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIH051668]
gi|31562994|sp|Q8CPJ5.1|CARA_STAES RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|27315340|gb|AAO04475.1|AE016746_265 carbamoyl-phosphate synthase small chain [Staphylococcus
epidermidis ATCC 12228]
gi|291319134|gb|EFE59504.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis M23864:W2(grey)]
gi|329729997|gb|EGG66388.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU144]
gi|329736340|gb|EGG72612.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU028]
gi|329736593|gb|EGG72859.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU045]
gi|341652458|gb|EGS76246.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU037]
gi|374402538|gb|EHQ73563.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU041]
gi|374406159|gb|EHQ77062.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU065]
gi|374408316|gb|EHQ79147.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU057]
gi|374410180|gb|EHQ80941.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU081]
gi|374820599|gb|EHR84675.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU120]
gi|383359209|gb|EID36639.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-K]
gi|383359441|gb|EID36864.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus aureus
subsp. aureus IS-250]
gi|394236426|gb|EJD81960.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM088]
gi|394249335|gb|EJD94548.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM049]
gi|394265901|gb|EJE10547.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM020]
gi|394266758|gb|EJE11383.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM021]
gi|394270056|gb|EJE14579.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM018]
gi|394278316|gb|EJE22633.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM008]
gi|394283682|gb|EJE27847.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIH05005]
gi|394286990|gb|EJE30964.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIH04008]
gi|394290037|gb|EJE33907.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIH08001]
gi|394292597|gb|EJE36339.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIH05001]
gi|394294271|gb|EJE37957.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIH06004]
gi|394297494|gb|EJE41091.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIH05003]
gi|394299081|gb|EJE42632.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIH04003]
gi|394302216|gb|EJE45664.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIH051668]
Length = 366
Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G+++I++QNH Y++D +L +EVTHI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKDLRTGKIDITSQNHGYSIDCDSLKNTDLEVTHIALNDGTVEGLRHKEL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F +F+ +MK K +
Sbjct: 326 PAFSVQYHPEARPGPSDSNYLFDEFIAMMKDFKEK 360
>gi|17228650|ref|NP_485198.1| carbamoyl phosphate synthase small subunit [Nostoc sp. PCC 7120]
gi|21759034|sp|Q8YXQ7.1|CARA_ANASP RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|17130501|dbj|BAB73112.1| carbamoyl phosphate synthase small subunit [Nostoc sp. PCC 7120]
Length = 388
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 49/93 (52%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
KFGH G N P Q RVEI++QNH++A+DP +LP+ V E++H+NLND T AGL + +L
Sbjct: 290 KFGHRGLNQPAGLTQ--RVEITSQNHSFAIDPDSLPEAVVEISHLNLNDRTVAGLRHKSL 347
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP D+D +F FV M++ K
Sbjct: 348 PIFSVQYHPEASPGPHDADYLFAQFVHQMRTTK 380
>gi|313672015|ref|YP_004050126.1| carbamoyl-phosphate synthase small subunit [Calditerrivibrio
nitroreducens DSM 19672]
gi|312938771|gb|ADR17963.1| carbamoyl-phosphate synthase small subunit [Calditerrivibrio
nitroreducens DSM 19672]
Length = 368
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 44/88 (50%), Positives = 61/88 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGN PV ++ G+VEI+AQNH +AVD + E+THINLND T G+ + +
Sbjct: 281 KFGHHGGNQPVKDLTTGKVEITAQNHCFAVDIQKILDKFEITHINLNDDTVEGIKHKTKS 340
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
+ ++QYH E PGP D+ +F+ FVEL+
Sbjct: 341 IFAVQYHPENGPGPHDAKYLFKRFVELL 368
>gi|357632785|ref|ZP_09130663.1| carbamoyl-phosphate synthase, small subunit [Desulfovibrio sp.
FW1012B]
gi|357581339|gb|EHJ46672.1| carbamoyl-phosphate synthase, small subunit [Desulfovibrio sp.
FW1012B]
Length = 375
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV +++ GR+EIS+QNH + VD +L VE+TH+NLNDGT G A+
Sbjct: 283 KFGHHGLNHPVKDLETGRIEISSQNHGFCVDIESLSD-VELTHVNLNDGTLEGFAHKKKP 341
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V+++QYH EA+PGP DS F F L++
Sbjct: 342 VIAIQYHPEAAPGPHDSRSFFSRFRTLVR 370
>gi|165918937|ref|ZP_02219023.1| carbamoyl-phosphate synthase, small subunit [Coxiella burnetii
Q321]
gi|165917334|gb|EDR35938.1| carbamoyl-phosphate synthase, small subunit [Coxiella burnetii
Q321]
Length = 382
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 62/89 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ GRV I++QNH+++VD +LP + VTH +L DGT G+A+
Sbjct: 291 KFGHHGANHPVQAVETGRVFITSQNHSFSVDENSLPATLRVTHRSLFDGTLQGIAHKTKP 350
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++ Q H EASPGP D VF +FV+LM+
Sbjct: 351 AIAFQGHPEASPGPHDMRGVFEEFVKLMR 379
>gi|153207448|ref|ZP_01946148.1| carbamoyl-phosphate synthase, small subunit [Coxiella burnetii 'MSU
Goat Q177']
gi|120576579|gb|EAX33203.1| carbamoyl-phosphate synthase, small subunit [Coxiella burnetii 'MSU
Goat Q177']
Length = 382
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 62/89 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ GRV I++QNH+++VD +LP + VTH +L DGT G+A+
Sbjct: 291 KFGHHGANHPVQAVETGRVFITSQNHSFSVDENSLPATLRVTHRSLFDGTLQGIAHKTKP 350
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++ Q H EASPGP D VF +FV+LM+
Sbjct: 351 AIAFQGHPEASPGPHDMRGVFEEFVKLMR 379
>gi|119384897|ref|YP_915953.1| carbamoyl phosphate synthase small subunit [Paracoccus
denitrificans PD1222]
gi|119374664|gb|ABL70257.1| carbamoyl-phosphate synthase small subunit [Paracoccus
denitrificans PD1222]
Length = 382
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 47/88 (53%), Positives = 61/88 (69%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV +++ G+VEI++ NH +AVD TLP+GV TH++L DG+ GL V
Sbjct: 292 GHHGANHPVKDVETGKVEITSMNHGFAVDAQTLPEGVIETHVSLFDGSNCGLRVADRPVF 351
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+QYH EASPGP DS +F F E M+S
Sbjct: 352 SVQYHPEASPGPQDSAYLFDRFTEAMRS 379
>gi|46200008|ref|YP_005675.1| carbamoyl phosphate synthase small subunit [Thermus thermophilus
HB27]
gi|55980249|ref|YP_143546.1| carbamoyl phosphate synthase small subunit [Thermus thermophilus
HB8]
gi|386359572|ref|YP_006057817.1| carbamoyl-phosphate synthase small subunit [Thermus thermophilus
JL-18]
gi|60389680|sp|Q72GZ0.1|CARA_THET2 RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|81364623|sp|Q5SLL3.1|CARA_THET8 RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|46197635|gb|AAS82048.1| carbamoyl-phosphate synthase small chain [Thermus thermophilus
HB27]
gi|55771662|dbj|BAD70103.1| carbamoyl-phosphate synthase, small subunit [Thermus thermophilus
HB8]
gi|383508599|gb|AFH38031.1| carbamoyl-phosphate synthase, small subunit [Thermus thermophilus
JL-18]
Length = 391
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV N+Q G++EI++QNH YAVD +L K TH+NLNDGT G+A+
Sbjct: 284 KFGHRGANHPVKNLQTGKIEITSQNHGYAVDIDSL-KDFRPTHVNLNDGTLEGMAHARYP 342
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
V S+QYH EA+PGP D+ +FR F+E +++
Sbjct: 343 VFSVQYHPEAAPGPHDALYLFRRFLEEVEA 372
>gi|381189552|ref|ZP_09897078.1| carbamoyl phosphate synthase small subunit [Thermus sp. RL]
gi|380452522|gb|EIA40120.1| carbamoyl phosphate synthase small subunit [Thermus sp. RL]
Length = 388
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV N+Q G++EI++QNH YAVD +L K TH+NLNDGT G+A+
Sbjct: 281 KFGHRGANHPVKNLQTGKIEITSQNHGYAVDIDSL-KDFRPTHVNLNDGTLEGMAHARYP 339
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
V S+QYH EA+PGP D+ +FR F+E +++
Sbjct: 340 VFSVQYHPEAAPGPHDALYLFRRFLEEVEA 369
>gi|328542883|ref|YP_004302992.1| carbamoyl-phosphate synthase small subunit [Polymorphum gilvum
SL003B-26A1]
gi|326412629|gb|ADZ69692.1| Carbamoyl-phosphate synthase small subunit [Polymorphum gilvum
SL003B-26A1]
Length = 399
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 48/93 (51%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPVH+ G+VEI++ NH +AVD +LP VE TH++L DG+ G+ V
Sbjct: 302 GHHGANHPVHDHTTGKVEITSMNHGFAVDRESLPDTVEETHVSLFDGSNCGIRLKGRPVF 361
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EASPGP DS +FR F LM+ K +A
Sbjct: 362 SVQYHPEASPGPRDSHYLFRRFTNLMRERKGQA 394
>gi|254457776|ref|ZP_05071204.1| carbamoyl-phosphate synthase, small subunit [Sulfurimonas
gotlandica GD1]
gi|207086568|gb|EDZ63852.1| carbamoyl-phosphate synthase, small subunit [Sulfurimonas
gotlandica GD1]
Length = 381
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV NI+ G VEI+AQNHNY V P + + EVTH NL D T GL Y
Sbjct: 293 KFGHHGGNHPVKNIKTGLVEITAQNHNYNV-PDNIVEIAEVTHTNLFDNTIEGLRYNDSP 351
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+Q+H EASPGP +S +F +F+ L+K
Sbjct: 352 IFSVQHHPEASPGPKESKYIFSEFLSLIK 380
>gi|291297074|ref|YP_003508472.1| carbamoyl-phosphate synthase small subunit [Meiothermus ruber DSM
1279]
gi|290472033|gb|ADD29452.1| carbamoyl-phosphate synthase, small subunit [Meiothermus ruber DSM
1279]
Length = 388
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV N+ G++EI++QNH YAVDP TL K + THINLNDGT G+A+
Sbjct: 281 KFGHRGANHPVKNLLTGKIEITSQNHGYAVDPDTL-KDFKPTHINLNDGTLEGMAHLRYP 339
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
V S+QYH EA PGP DS +F F+E
Sbjct: 340 VFSVQYHPEACPGPHDSIYLFHRFLE 365
>gi|384215643|ref|YP_005606809.1| carbamoylphosphate synthase small chain [Bradyrhizobium japonicum
USDA 6]
gi|354954542|dbj|BAL07221.1| carbamoylphosphate synthase small chain [Bradyrhizobium japonicum
USDA 6]
Length = 396
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 48/90 (53%), Positives = 61/90 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI++ NH +AVD ATLPKG THI+L DG+ G+ V
Sbjct: 305 GHHGANHPVKDETTGKVEITSMNHGFAVDEATLPKGATQTHISLFDGSNCGIQLDGKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F+ F +LM+ K
Sbjct: 365 SVQYHPEASPGPRDSHYLFQRFADLMRQKK 394
>gi|420198988|ref|ZP_14704672.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM031]
gi|394272674|gb|EJE17124.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis NIHLM031]
Length = 366
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 46/95 (48%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV ++ G+++I++QNH Y++D +L +EVTHI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKGLRTGKIDITSQNHGYSIDRDSLKNTDLEVTHIALNDGTVEGLRHKEL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F +F+ +MK K +
Sbjct: 326 PAFSVQYHPEARPGPSDSNYLFDEFITMMKDFKEK 360
>gi|386392335|ref|ZP_10077116.1| carbamoyl-phosphate synthase, small subunit [Desulfovibrio sp. U5L]
gi|385733213|gb|EIG53411.1| carbamoyl-phosphate synthase, small subunit [Desulfovibrio sp. U5L]
Length = 375
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV +++ GR+EIS+QNH + VD +L VE+TH+NLNDGT G A+
Sbjct: 283 KFGHHGLNHPVKDLETGRIEISSQNHGFCVDIESLSD-VELTHVNLNDGTLEGFAHKKKP 341
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V+++QYH EA+PGP DS F F L++
Sbjct: 342 VIAIQYHPEAAPGPHDSRSFFSRFRTLVR 370
>gi|420239891|ref|ZP_14744167.1| carbamoyl-phosphate synthase, small subunit [Rhizobium sp. CF080]
gi|398078200|gb|EJL69122.1| carbamoyl-phosphate synthase, small subunit [Rhizobium sp. CF080]
Length = 403
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 61/90 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+GVE THI+L DGT GL V
Sbjct: 306 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSKSLPQGVEETHISLFDGTNCGLRVTGKQVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ +++ K
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINMVREKK 395
>gi|347733442|ref|ZP_08866501.1| carbamoyl-phosphate synthase, small subunit [Desulfovibrio sp. A2]
gi|347517803|gb|EGY24989.1| carbamoyl-phosphate synthase, small subunit [Desulfovibrio sp. A2]
Length = 376
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 46/89 (51%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ G +EIS+QNH + VD A+LP VE+TH+NLNDGT G A+
Sbjct: 284 KFGHHGCNHPVKDLVTGHIEISSQNHGFCVDIASLPD-VEITHVNLNDGTLEGFAHKTRP 342
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++++Q+H EASPGP DS F F +++
Sbjct: 343 ILAVQHHPEASPGPTDSRYFFARFRNMVR 371
>gi|223938276|ref|ZP_03630171.1| carbamoyl-phosphate synthase, small subunit [bacterium Ellin514]
gi|223892990|gb|EEF59456.1| carbamoyl-phosphate synthase, small subunit [bacterium Ellin514]
Length = 387
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 46/89 (51%), Positives = 61/89 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV ++Q+G+VEI++QNH +AVDP +LP V V INLND T G+ +
Sbjct: 295 KFGHRGANQPVKDMQSGKVEITSQNHGFAVDPKSLPSEVSVDRINLNDETVEGMRHKTKP 354
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V +QYH EASPGP DS +F +F L++
Sbjct: 355 VFCVQYHPEASPGPHDSTPLFAEFRALIE 383
>gi|78186046|ref|YP_374089.1| carbamoyl phosphate synthase small subunit [Chlorobium luteolum DSM
273]
gi|78165948|gb|ABB23046.1| carbamoyl-phosphate synthase small subunit [Chlorobium luteolum DSM
273]
Length = 369
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 64/92 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N+ + R+EI++QNH +AV +LP+ VE+TH+NL D T G+ + L
Sbjct: 277 KFGHHGSNHPVKNMASKRIEITSQNHGFAVGMDSLPESVEMTHLNLYDQTIEGIRHSELP 336
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EA+PGP DS +F +F +M+ K
Sbjct: 337 CFSVQYHPEAAPGPHDSHYLFDEFTAMMERAK 368
>gi|428317880|ref|YP_007115762.1| carbamoyl-phosphate synthase, small subunit [Oscillatoria
nigro-viridis PCC 7112]
gi|428241560|gb|AFZ07346.1| carbamoyl-phosphate synthase, small subunit [Oscillatoria
nigro-viridis PCC 7112]
Length = 385
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 48/89 (53%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHP Q +VEI++QNH +A+DP +L VE+TH+NLND T AGL + L
Sbjct: 290 KFGHRGLNHPAGLTQ--QVEITSQNHGFAIDPDSLVPEVEITHLNLNDRTVAGLKHKTLP 347
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+QYH EASPGP D+D +F FV+ M+
Sbjct: 348 LFSVQYHPEASPGPHDADYLFDRFVQSMR 376
>gi|373867731|ref|ZP_09604129.1| carbamoyl-phosphate synthase, small subunit [Sulfurimonas
gotlandica GD1]
gi|372469832|gb|EHP30036.1| carbamoyl-phosphate synthase, small subunit [Sulfurimonas
gotlandica GD1]
Length = 379
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV NI+ G VEI+AQNHNY V P + + EVTH NL D T GL Y
Sbjct: 291 KFGHHGGNHPVKNIKTGLVEITAQNHNYNV-PDNIVEIAEVTHTNLFDNTIEGLRYNDSP 349
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+Q+H EASPGP +S +F +F+ L+K
Sbjct: 350 IFSVQHHPEASPGPKESKYIFSEFLSLIK 378
>gi|215919155|ref|NP_820275.2| carbamoyl phosphate synthase small subunit [Coxiella burnetii RSA
493]
gi|206584039|gb|AAO90789.2| carbamoyl-phosphate synthase small chain [Coxiella burnetii RSA
493]
Length = 402
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 62/89 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ GRV I++QNH+++VD +LP + VTH +L DGT G+A+
Sbjct: 311 KFGHHGANHPVQAVETGRVFITSQNHSFSVDENSLPATLRVTHRSLFDGTLQGIAHKTKP 370
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++ Q H EASPGP D VF +FV+LM+
Sbjct: 371 AIAFQGHPEASPGPHDMRRVFEEFVKLMR 399
>gi|148258002|ref|YP_001242587.1| carbamoyl phosphate synthase small subunit [Bradyrhizobium sp.
BTAi1]
gi|146410175|gb|ABQ38681.1| carbamoyl-phosphate synthase small subunit [Bradyrhizobium sp.
BTAi1]
Length = 398
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 49/93 (52%), Positives = 61/93 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI++ NH +AVD TLP G THI+L DG+ G+A V
Sbjct: 305 GHHGANHPVKDETTGKVEITSMNHGFAVDQDTLPAGATQTHISLFDGSNCGIALEGKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EASPGP DS +F+ F ELM+ K A
Sbjct: 365 SVQYHPEASPGPRDSHYLFQRFAELMRENKRSA 397
>gi|161830547|ref|YP_001597135.1| carbamoyl phosphate synthase small subunit [Coxiella burnetii RSA
331]
gi|161762414|gb|ABX78056.1| carbamoyl-phosphate synthase, small subunit [Coxiella burnetii RSA
331]
Length = 382
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 62/89 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ GRV I++QNH+++VD +LP + VTH +L DGT G+A+
Sbjct: 291 KFGHHGANHPVQAVETGRVFITSQNHSFSVDENSLPATLRVTHRSLFDGTLQGIAHKTKP 350
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++ Q H EASPGP D VF +FV+LM+
Sbjct: 351 AIAFQGHPEASPGPHDMRRVFEEFVKLMR 379
>gi|445059877|ref|YP_007385281.1| carbamoyl phosphate synthase small subunit [Staphylococcus warneri
SG1]
gi|443425934|gb|AGC90837.1| carbamoyl phosphate synthase small subunit [Staphylococcus warneri
SG1]
Length = 366
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH Y++D +L +EVTHI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKNLKTGKVDITSQNHGYSIDRDSLENTDLEVTHIALNDGTVEGLRHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EA PGP DS+ +F +F+ +M
Sbjct: 326 PAFSVQYHPEARPGPSDSNYLFDEFITMM 354
>gi|365882092|ref|ZP_09421365.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Bradyrhizobium sp. ORS 375]
gi|365289650|emb|CCD93896.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Bradyrhizobium sp. ORS 375]
Length = 398
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 49/93 (52%), Positives = 61/93 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI++ NH +AVD TLP G THI+L DG+ G+A V
Sbjct: 305 GHHGANHPVKDETTGKVEITSMNHGFAVDQDTLPAGATQTHISLFDGSNCGIALEGKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EASPGP DS +F+ F ELM+ K A
Sbjct: 365 SVQYHPEASPGPRDSHYLFQRFAELMREKKRSA 397
>gi|417643751|ref|ZP_12293781.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus warneri
VCU121]
gi|330685509|gb|EGG97162.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
epidermidis VCU121]
Length = 366
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH Y++D +L +EVTHI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKNLKTGKVDITSQNHGYSIDRDSLENTDLEVTHIALNDGTVEGLRHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EA PGP DS+ +F +F+ +M
Sbjct: 326 PAFSVQYHPEARPGPSDSNYLFDEFITMM 354
>gi|337286430|ref|YP_004625903.1| carbamoyl-phosphate synthase, small subunit [Thermodesulfatator
indicus DSM 15286]
gi|335359258|gb|AEH44939.1| carbamoyl-phosphate synthase, small subunit [Thermodesulfatator
indicus DSM 15286]
Length = 374
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 43/90 (47%), Positives = 63/90 (70%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV ++ GR+EI++QNH + V LPK V+++HINLNDGT G+ + L
Sbjct: 278 KFGHRGANQPVKDLATGRIEITSQNHGFCVRQEELPKEVKISHINLNDGTLEGIKHRELP 337
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
+ S+QYH E +PGP DS +F F++++K+
Sbjct: 338 LFSVQYHPENAPGPHDSIYLFDRFMDMIKA 367
>gi|298373547|ref|ZP_06983536.1| carbamoyl-phosphate synthase, small subunit [Bacteroidetes oral
taxon 274 str. F0058]
gi|298274599|gb|EFI16151.1| carbamoyl-phosphate synthase, small subunit [Bacteroidetes oral
taxon 274 str. F0058]
Length = 365
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 45/93 (48%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV ++Q G++ I++QNH+YA+D +L G+++THINL D T G+ A
Sbjct: 273 KFGHRGGNHPVKDLQTGKIHITSQNHSYAIDAESLKNTGLQITHINLLDNTTEGIESKAD 332
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V ++QYH E++PGP DS +F F+E++K K
Sbjct: 333 KVFAVQYHPESAPGPQDSIYLFDRFIEMIKENK 365
>gi|408377466|ref|ZP_11175067.1| carbamoyl phosphate synthase small subunit [Agrobacterium
albertimagni AOL15]
gi|407748457|gb|EKF59972.1| carbamoyl phosphate synthase small subunit [Agrobacterium
albertimagni AOL15]
Length = 401
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 61/90 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+ VE THI+L DGT GL A V
Sbjct: 304 GHHGANHPVKDFTTGKVEIVSMNHGFAVDSKSLPESVEETHISLFDGTNCGLRLKAKPVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ +++ K
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFINMVRETK 393
>gi|337288091|ref|YP_004627563.1| carbamoyl-phosphate synthase, small subunit [Thermodesulfobacterium
sp. OPB45]
gi|334901829|gb|AEH22635.1| carbamoyl-phosphate synthase, small subunit [Thermodesulfobacterium
geofontis OPF15]
Length = 377
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 59/89 (66%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV N+ N RVEI++QNH + V LPK +THINLND T G+ P L
Sbjct: 281 KFGHRGINHPVLNLFNKRVEITSQNHGFCVKKEELPKSALITHINLNDQTLEGIFVPDLK 340
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
MS+QYH E +PGP DS +F F+ L++
Sbjct: 341 AMSVQYHPENAPGPHDSIYLFDSFLNLLE 369
>gi|335033374|ref|ZP_08526742.1| carbamoyl phosphate synthase small subunit [Agrobacterium sp. ATCC
31749]
gi|333795312|gb|EGL66641.1| carbamoyl phosphate synthase small subunit [Agrobacterium sp. ATCC
31749]
Length = 387
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 49/93 (52%), Positives = 61/93 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+GVE TH +L DGT GL V
Sbjct: 290 GHHGANHPVKDFTTGKVEIVSMNHGFAVDTKSLPEGVEETHTSLFDGTNCGLRIVGKPVF 349
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR FV L++ K A
Sbjct: 350 SVQHHPEASPGPQDSHYLFRRFVNLLRENKGEA 382
>gi|167745332|ref|ZP_02417459.1| hypothetical protein ANACAC_00023 [Anaerostipes caccae DSM 14662]
gi|317473237|ref|ZP_07932534.1| carbamoyl-phosphate synthase [Anaerostipes sp. 3_2_56FAA]
gi|167655053|gb|EDR99182.1| carbamoyl-phosphate synthase, small subunit [Anaerostipes caccae
DSM 14662]
gi|316899332|gb|EFV21349.1| carbamoyl-phosphate synthase [Anaerostipes sp. 3_2_56FAA]
Length = 359
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
+FGH GGNHPV ++ GRV IS+QNH Y + ++PK + E++ IN+ND + GL Y
Sbjct: 265 RFGHRGGNHPVKDLATGRVYISSQNHGYVIKKESVPKNLAEISFINVNDKSIEGLRYKGK 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
NV ++Q+H EASPGP D+ +F +F+E+MK K
Sbjct: 325 NVRTVQFHPEASPGPVDTAYLFDEFIEMMKGAK 357
>gi|239636318|ref|ZP_04677320.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus warneri
L37603]
gi|239597673|gb|EEQ80168.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus warneri
L37603]
Length = 366
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 46/89 (51%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N++ G+V+I++QNH Y++D +L +EVTHI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKNLRTGKVDITSQNHGYSIDRDSLENTDLEVTHIALNDGTVEGLRHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EA PGP DS+ +F +F+ +M
Sbjct: 326 PAFSVQYHPEARPGPSDSNYLFDEFITMM 354
>gi|327401415|ref|YP_004342254.1| carbamoyl-phosphate synthase small subunit [Archaeoglobus veneficus
SNP6]
gi|327316923|gb|AEA47539.1| carbamoyl-phosphate synthase, small subunit [Archaeoglobus
veneficus SNP6]
Length = 363
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 46/89 (51%), Positives = 60/89 (67%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV + + GRV IS+QNH +AVD +LP +EVT INLND T GL +
Sbjct: 273 KFGHRGANQPVKDFETGRVFISSQNHGFAVDDKSLPPNMEVTQINLNDHTVEGLRHKEYP 332
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+M +QYH EASPGP D+ F FV++++
Sbjct: 333 LMCVQYHPEASPGPHDTYFFFDRFVKMLR 361
>gi|219682076|ref|YP_002468460.1| carbamoyl phosphate synthase small subunit [Buchnera aphidicola
str. Tuc7 (Acyrthosiphon pisum)]
gi|219621809|gb|ACL29965.1| carbamoyl-phosphate synthase small subunit [Buchnera aphidicola
str. Tuc7 (Acyrthosiphon pisum)]
Length = 387
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 47/92 (51%), Positives = 63/92 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I+N RV I++QNH++ VD LP +E+TH +L DGT GL+ +
Sbjct: 291 KFGHHGGNHPVKDIKNNRVIITSQNHSFTVDTENLPNNIEITHSSLFDGTLQGLSLTNKS 350
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D+ +F F++L+ S K
Sbjct: 351 AFSFQGHPEASPGPHDASYLFDYFIKLIVSQK 382
>gi|340781399|ref|YP_004748006.1| carbamoyl-phosphate synthase small chain [Acidithiobacillus caldus
SM-1]
gi|340555553|gb|AEK57307.1| Carbamoyl-phosphate synthase small chain [Acidithiobacillus caldus
SM-1]
Length = 376
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 63/94 (67%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++++GRV I++QNH +A+D TLP VEVTH +L DG+ G+
Sbjct: 279 KFGHHGANHPVQDLRSGRVLITSQNHGFAIDADTLPARVEVTHRSLFDGSLQGMRLRDRP 338
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
V S Q H EA PGP D+ C+F DFV +S + +
Sbjct: 339 VFSFQGHPEAGPGPHDAACIFDDFVASFRSSQEK 372
>gi|255020832|ref|ZP_05292888.1| Carbamoyl-phosphate synthase small chain [Acidithiobacillus caldus
ATCC 51756]
gi|254969623|gb|EET27129.1| Carbamoyl-phosphate synthase small chain [Acidithiobacillus caldus
ATCC 51756]
Length = 376
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 63/94 (67%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++++GRV I++QNH +A+D TLP VEVTH +L DG+ G+
Sbjct: 279 KFGHHGANHPVQDLRSGRVLITSQNHGFAIDADTLPARVEVTHRSLFDGSLQGMRLRDRP 338
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
V S Q H EA PGP D+ C+F DFV +S + +
Sbjct: 339 VFSFQGHPEAGPGPHDAACIFDDFVASFRSSQEK 372
>gi|296532784|ref|ZP_06895463.1| carbamoyl-phosphate synthase, small subunit [Roseomonas cervicalis
ATCC 49957]
gi|296266892|gb|EFH12838.1| carbamoyl-phosphate synthase, small subunit [Roseomonas cervicalis
ATCC 49957]
Length = 466
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 63/90 (70%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G N PV ++ GRVEI++QNH +AVD +LP+ V+VTHI+L DG+ G+A
Sbjct: 375 GHRGANQPVKDLATGRVEITSQNHGFAVDEKSLPESVKVTHISLFDGSNEGIAATDRPAF 434
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +FR FVE+++ K
Sbjct: 435 SVQYHPEASPGPSDSHYLFRRFVEMIEQHK 464
>gi|27382482|ref|NP_774011.1| carbamoyl phosphate synthase small subunit [Bradyrhizobium
japonicum USDA 110]
gi|31562955|sp|Q89DR8.1|CARA_BRAJA RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|27355654|dbj|BAC52636.1| carbamoylphosphate synthase small chain [Bradyrhizobium japonicum
USDA 110]
Length = 396
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 48/90 (53%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI++ NH +AVD TLPKG THI+L DG+ G+ V
Sbjct: 305 GHHGANHPVKDETTGKVEITSMNHGFAVDEKTLPKGATQTHISLFDGSNCGIQLDGKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F+ F ELM+ K
Sbjct: 365 SVQYHPEASPGPRDSHYLFQRFAELMRQKK 394
>gi|336437398|ref|ZP_08617104.1| carbamoyl-phosphate synthase, small subunit [Lachnospiraceae
bacterium 1_4_56FAA]
gi|336005524|gb|EGN35569.1| carbamoyl-phosphate synthase, small subunit [Lachnospiraceae
bacterium 1_4_56FAA]
Length = 366
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDP-ATLPKGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV N++ G+VEI++QNH+YAVD + L +E+TH+NL D T G+A
Sbjct: 269 KFGHRGGNHPVKNLRTGKVEITSQNHSYAVDKDSILDTRLEITHLNLLDQTVEGVACEEE 328
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V +QYH E++PGP DS +F F+E M+ +
Sbjct: 329 KVFCVQYHPESAPGPQDSSYLFEQFIEQMEGTR 361
>gi|390947512|ref|YP_006411272.1| carbamoyl-phosphate synthase small subunit [Alistipes finegoldii
DSM 17242]
gi|390424081|gb|AFL78587.1| carbamoyl-phosphate synthase, small subunit [Alistipes finegoldii
DSM 17242]
Length = 363
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 47/93 (50%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV N+ G++EI++QNH+YAVD +L G+E+TH+NL DGT G+
Sbjct: 269 KFGHRGGNHPVKNLATGKIEITSQNHSYAVDVDSLAGTGLELTHVNLLDGTAEGVECVGD 328
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+QYH E++ GP DS +FR F ++M+ K
Sbjct: 329 AVFSMQYHPESASGPQDSGYLFRKFTKIMEERK 361
>gi|365894433|ref|ZP_09432579.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Bradyrhizobium sp. STM 3843]
gi|365424821|emb|CCE05121.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Bradyrhizobium sp. STM 3843]
Length = 398
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 48/90 (53%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI++ NH +AVD ATLP G THI+L DG+ G+ V
Sbjct: 305 GHHGANHPVKDETTGKVEITSMNHGFAVDQATLPAGATQTHISLFDGSNCGIQLEGKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F+ F ELM+ K
Sbjct: 365 SVQYHPEASPGPRDSHYLFQRFAELMRENK 394
>gi|367473092|ref|ZP_09472660.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Bradyrhizobium sp. ORS 285]
gi|365274589|emb|CCD85128.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Bradyrhizobium sp. ORS 285]
Length = 398
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 49/93 (52%), Positives = 61/93 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI++ NH +AVD TLP G THI+L DG+ G+A V
Sbjct: 305 GHHGANHPVKDETTGKVEITSMNHGFAVDQDTLPAGATQTHISLFDGSNCGIALEGKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EASPGP DS +F+ F ELM+ K A
Sbjct: 365 SVQYHPEASPGPRDSHYLFQRFAELMREKKRSA 397
>gi|328950304|ref|YP_004367639.1| carbamoyl-phosphate synthase small subunit [Marinithermus
hydrothermalis DSM 14884]
gi|328450628|gb|AEB11529.1| carbamoyl-phosphate synthase, small subunit [Marinithermus
hydrothermalis DSM 14884]
Length = 388
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV N+ G++EI++QNH YAVDP +L K + TH+NLNDGT G+ +
Sbjct: 281 KFGHRGANHPVKNLLTGKIEITSQNHGYAVDPDSL-KDFKPTHVNLNDGTLEGMTHVRYP 339
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
V S+QYH EASPGP DS +F F+E +++
Sbjct: 340 VFSVQYHPEASPGPHDSRYLFHRFLEEVEA 369
>gi|219681520|ref|YP_002467905.1| carbamoyl phosphate synthase small subunit [Buchnera aphidicola
str. 5A (Acyrthosiphon pisum)]
gi|257471201|ref|ZP_05635200.1| carbamoyl phosphate synthase small subunit [Buchnera aphidicola
str. LSR1 (Acyrthosiphon pisum)]
gi|219624363|gb|ACL30518.1| carbamoyl-phosphate synthase small subunit [Buchnera aphidicola
str. 5A (Acyrthosiphon pisum)]
Length = 387
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 47/92 (51%), Positives = 63/92 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I+N RV I++QNH++ VD LP +E+TH +L DGT GL+ +
Sbjct: 291 KFGHHGGNHPVKDIKNNRVIITSQNHSFTVDTENLPNNIEITHSSLFDGTLQGLSLTNKS 350
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D+ +F F++L+ S K
Sbjct: 351 AFSFQGHPEASPGPHDASYLFDYFIKLIVSQK 382
>gi|21672907|ref|NP_660972.1| carbamoyl phosphate synthase small subunit [Chlorobium tepidum TLS]
gi|25452825|sp|Q8KGA2.1|CARA_CHLTE RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|21645961|gb|AAM71314.1| carbamoyl-phosphate synthase, small subunit [Chlorobium tepidum
TLS]
Length = 366
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 65/92 (70%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N+ + +EI++QNH +AV+ +LP +E+TH NL D T G+ + L
Sbjct: 274 KFGHHGANHPVKNLLSNTIEITSQNHGFAVEMESLPGELELTHKNLYDMTVEGIRHRELP 333
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EA+PGP DS +F++F ELM+ +K
Sbjct: 334 CFSVQYHPEAAPGPHDSHYLFKEFTELMERLK 365
>gi|294786971|ref|ZP_06752225.1| carbamoyl-phosphate synthase, small subunit [Parascardovia
denticolens F0305]
gi|294485804|gb|EFG33438.1| carbamoyl-phosphate synthase, small subunit [Parascardovia
denticolens F0305]
Length = 408
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/94 (50%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ GRVEI+ QNH +AVD +L +E+THI+LNDG C G+ +
Sbjct: 296 KFGHRGSNHPVKNLATGRVEITTQNHGFAVDKDSLAGTDLELTHISLNDGACEGVRNTTV 355
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKY 93
S+QYH EA+ GP DS+ +F F++LM S +
Sbjct: 356 PAFSVQYHPEANGGPHDSNYLFDQFMDLMDSASH 389
>gi|315918116|ref|ZP_07914356.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
gi|313691991|gb|EFS28826.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
Length = 357
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/92 (45%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGNHPV ++ + R+ I++QNH YA+D +P+ V+H+++NDGT GL L+
Sbjct: 264 KFGHRGGNHPVKDLDHNRIYITSQNHGYAID--KIPEKARVSHVSMNDGTVEGLKCDDLH 321
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+M++Q+H EA PGP D + +F +F+E++K K
Sbjct: 322 IMTVQFHPEAWPGPTDCEYLFDEFLEVIKGAK 353
>gi|342217478|ref|ZP_08710122.1| carbamoyl-phosphate synthase, small subunit [Megasphaera sp. UPII
135-E]
gi|341594281|gb|EGS37081.1| carbamoyl-phosphate synthase, small subunit [Megasphaera sp. UPII
135-E]
Length = 352
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/88 (50%), Positives = 61/88 (69%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGH G NHPV ++ GRV I++QNH YA+D TLP +VT+ +L+D T G P+ ++
Sbjct: 263 FGHRGANHPVQDVHTGRVYITSQNHGYAIDADTLPPTAQVTYRHLHDNTLEGFVVPSQHI 322
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMK 89
M +QYH EASPGP DS +F FV++M+
Sbjct: 323 MCVQYHPEASPGPTDSLYLFEQFVKMME 350
>gi|384084010|ref|ZP_09995185.1| carbamoyl-phosphate synthase, small subunit [Acidithiobacillus
thiooxidans ATCC 19377]
Length = 380
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++++GRV I++QNH +AVD +LP V +TH +L DG+ G+A+ +L
Sbjct: 284 KFGHHGANHPVKDLRSGRVLITSQNHGFAVDAQSLPDCVRITHTSLFDGSLQGMAHNSLP 343
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
V S Q H EA PGP D+ +F DFV M
Sbjct: 344 VFSFQGHPEAGPGPHDASIIFDDFVAAM 371
>gi|407973771|ref|ZP_11154682.1| carbamoyl phosphate synthase small subunit [Nitratireductor indicus
C115]
gi|407430831|gb|EKF43504.1| carbamoyl phosphate synthase small subunit [Nitratireductor indicus
C115]
Length = 398
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/88 (53%), Positives = 60/88 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD TLP+GVE TH++L DG+ GL V
Sbjct: 302 GHHGANHPVKDFTTGKVEIVSMNHGFAVDGDTLPQGVEETHVSLFDGSNCGLTITGRPVF 361
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+Q+H EASPGP DS +FR F L++S
Sbjct: 362 SVQHHPEASPGPQDSHYLFRRFANLIRS 389
>gi|392971799|ref|ZP_10337192.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) small subunit
[Staphylococcus equorum subsp. equorum Mu2]
gi|403046876|ref|ZP_10902345.1| carbamoyl phosphate synthase small subunit [Staphylococcus sp.
OJ82]
gi|392510338|emb|CCI60482.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) small subunit
[Staphylococcus equorum subsp. equorum Mu2]
gi|402763572|gb|EJX17665.1| carbamoyl phosphate synthase small subunit [Staphylococcus sp.
OJ82]
Length = 366
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G++ I++QNH YA+D +L +E+THI +NDGT GL + +L
Sbjct: 266 KFGHRGANHPVKDLKTGKIAITSQNHGYAIDKDSLIDSDLEITHIAINDGTVEGLKHKSL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F +F+++M K +
Sbjct: 326 PAFSVQYHPEACPGPSDSNYLFDEFIDMMNDFKAK 360
>gi|258645188|ref|ZP_05732657.1| carbamoyl-phosphate synthase, small subunit [Dialister invisus DSM
15470]
gi|260402537|gb|EEW96084.1| carbamoyl-phosphate synthase, small subunit [Dialister invisus DSM
15470]
Length = 354
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 64/91 (70%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGH G NHPV +++ GRV I++QNH YAV LP+ +EVTH ++NDGT G + L +
Sbjct: 263 FGHRGSNHPVKDLRTGRVYITSQNHGYAVSDEELPECIEVTHRSVNDGTIEGFCHKTLPI 322
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
++QYH EASPGP D+ +F++FV+ M+ K
Sbjct: 323 QAVQYHPEASPGPTDNFYLFKEFVKAMEDAK 353
>gi|402850849|ref|ZP_10899035.1| Carbamoyl-phosphate synthase small chain [Rhodovulum sp. PH10]
gi|402498859|gb|EJW10585.1| Carbamoyl-phosphate synthase small chain [Rhodovulum sp. PH10]
Length = 394
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 62/90 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV +++ G+VEI++ NH +AVD +LP V+ TH++L DG+ GLA V
Sbjct: 303 GHHGANHPVKDLETGKVEITSMNHGFAVDRDSLPGNVKETHVSLFDGSNCGLAMTDRPVF 362
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +FR F LM+ K
Sbjct: 363 SVQYHPEASPGPRDSHYLFRRFAGLMRDRK 392
>gi|384225953|ref|YP_005617116.1| carbamoyl phosphate synthase small subunit [Buchnera aphidicola
str. TLW03 (Acyrthosiphon pisum)]
gi|384227012|ref|YP_005618762.1| carbamoyl phosphate synthase small subunit [Buchnera aphidicola
str. LL01 (Acyrthosiphon pisum)]
gi|414562505|ref|YP_005617696.1| carbamoyl phosphate synthase small subunit [Buchnera aphidicola
str. JF99 (Acyrthosiphon pisum)]
gi|311085888|gb|ADP65970.1| carbamoyl phosphate synthase small subunit [Buchnera aphidicola
str. LL01 (Acyrthosiphon pisum)]
gi|311086460|gb|ADP66541.1| carbamoyl phosphate synthase small subunit [Buchnera aphidicola
str. TLW03 (Acyrthosiphon pisum)]
gi|311087041|gb|ADP67121.1| carbamoyl phosphate synthase small subunit [Buchnera aphidicola
str. JF99 (Acyrthosiphon pisum)]
Length = 387
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/92 (51%), Positives = 63/92 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I+N RV I++QNH++ VD LP +E+TH +L DGT GL+ +
Sbjct: 291 KFGHHGGNHPVKDIKNNRVIITSQNHSFTVDTENLPNNIEITHSSLFDGTLQGLSLTNKS 350
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D+ +F F++L+ S K
Sbjct: 351 AFSFQGHPEASPGPHDASYLFDYFIKLIVSQK 382
>gi|15616765|ref|NP_239977.1| carbamoyl phosphate synthase small subunit [Buchnera aphidicola
str. APS (Acyrthosiphon pisum)]
gi|11131699|sp|P57245.1|CARA_BUCAI RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|25291388|pir||G84946 carbamoyl-phosphate synthase (glutamine-hydrolyzing) (EC 6.3.5.5)
small chain [imported] - Buchnera sp. (strain APS)
gi|10038828|dbj|BAB12863.1| carbamoyl-phosphate synthase small chain [Buchnera aphidicola str.
APS (Acyrthosiphon pisum)]
Length = 387
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/92 (51%), Positives = 63/92 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I+N RV I++QNH++ VD LP +E+TH +L DGT GL+ +
Sbjct: 291 KFGHHGGNHPVKDIKNNRVIITSQNHSFTVDTENLPNNIEITHSSLFDGTLQGLSLTNKS 350
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D+ +F F++L+ S K
Sbjct: 351 AFSFQGHPEASPGPHDASYLFDYFIKLIVSQK 382
>gi|314933377|ref|ZP_07840742.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus caprae
C87]
gi|313653527|gb|EFS17284.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus caprae
C87]
Length = 364
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G+V+I++QNH Y++D +L +EVTHI LNDGT GL + L
Sbjct: 264 KFGHRGANHPVKDLRTGKVDITSQNHGYSIDRDSLKDTDLEVTHIALNDGTVEGLRHKQL 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F +F+ +M K +
Sbjct: 324 PAFSVQYHPEARPGPSDSNYLFDEFITMMNEFKEK 358
>gi|409991525|ref|ZP_11274779.1| carbamoyl phosphate synthase small subunit [Arthrospira platensis
str. Paraca]
gi|291571379|dbj|BAI93651.1| carbamoyl-phosphate synthase small subunit [Arthrospira platensis
NIES-39]
gi|409937619|gb|EKN79029.1| carbamoyl phosphate synthase small subunit [Arthrospira platensis
str. Paraca]
Length = 384
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/92 (51%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P ++ +VEI++QNH +A+DP +L + VE+TH+NLND T AGL + L
Sbjct: 294 KFGHRGLNQPA-GLEKRQVEITSQNHGFALDPDSLAEDVEITHLNLNDRTVAGLKHKTLP 352
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP D+D +F FV+ M+ K
Sbjct: 353 LFSVQYHPEASPGPHDADYLFEQFVKEMEKAK 384
>gi|312116184|ref|YP_004013780.1| carbamoyl-phosphate synthase small subunit [Rhodomicrobium
vannielii ATCC 17100]
gi|311221313|gb|ADP72681.1| carbamoyl-phosphate synthase, small subunit [Rhodomicrobium
vannielii ATCC 17100]
Length = 405
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 62/88 (70%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI++ NH +AVD A+LP VE TH++L DG+ G+ V
Sbjct: 307 GHHGSNHPVMDYTTGKVEITSMNHGFAVDRASLPSDVEETHVSLFDGSNCGIRLRGRPVF 366
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+QYH EASPGP DS +FR FVE+M++
Sbjct: 367 SVQYHPEASPGPQDSHYLFRRFVEMMRA 394
>gi|317058222|ref|ZP_07922707.1| carbamoyl-phosphate synthetase glutaminase subunit [Fusobacterium
sp. 3_1_5R]
gi|313683898|gb|EFS20733.1| carbamoyl-phosphate synthetase glutaminase subunit [Fusobacterium
sp. 3_1_5R]
Length = 357
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/92 (45%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGNHPV ++ + R+ I++QNH YA+D +P+ V+H+++NDGT GL L+
Sbjct: 264 KFGHRGGNHPVKDLDHNRIYITSQNHGYAID--KIPEKARVSHVSMNDGTIEGLKCDDLH 321
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+M++Q+H EA PGP D + +F +F+E++K K
Sbjct: 322 IMTVQFHPEAWPGPTDCEYLFDEFLEVIKGAK 353
>gi|153813956|ref|ZP_01966624.1| hypothetical protein RUMTOR_00163 [Ruminococcus torques ATCC 27756]
gi|317501484|ref|ZP_07959682.1| carbamoyl-phosphate synthase small subunit [Lachnospiraceae
bacterium 8_1_57FAA]
gi|331088044|ref|ZP_08336965.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 3_1_46FAA]
gi|336439732|ref|ZP_08619338.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 1_1_57FAA]
gi|145848352|gb|EDK25270.1| carbamoyl-phosphate synthase, small subunit [Ruminococcus torques
ATCC 27756]
gi|316897113|gb|EFV19186.1| carbamoyl-phosphate synthase small subunit [Lachnospiraceae
bacterium 8_1_57FAA]
gi|330409000|gb|EGG88459.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 3_1_46FAA]
gi|336015324|gb|EGN45142.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 1_1_57FAA]
Length = 366
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV N++ G++EI++QNH+YAVD A+L +E+THINL D T G+A
Sbjct: 269 KFGHRGGNHPVKNLKTGKIEITSQNHSYAVDYASLKNTDLEMTHINLLDHTVEGIACRKD 328
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKY 93
+V S+QYH E++PGP DS +F F+++M+ K+
Sbjct: 329 HVFSVQYHPESAPGPQDSGYLFDQFIQMMEENKH 362
>gi|161544986|ref|YP_153987.2| carbamoyl phosphate synthase small subunit [Anaplasma marginale
str. St. Maries]
gi|269958673|ref|YP_003328460.1| carbamoyl phosphate synthase small subunit [Anaplasma centrale str.
Israel]
gi|269848502|gb|ACZ49146.1| carbamoyl phosphate synthase small subunit [Anaplasma centrale str.
Israel]
Length = 366
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 63/93 (67%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
+ GH G NHPV+N+ VE+++QNH +AVD TLP+ EVTHI+L DGT G+
Sbjct: 274 RHGHRGSNHPVYNVATKAVEVTSQNHGFAVDAQTLPENAEVTHISLFDGTIEGMKLLDRP 333
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKY 93
V+S+QYH E PGP DS +FRDFV L ++ ++
Sbjct: 334 VLSVQYHPEGHPGPHDSHYIFRDFVNLARAYRW 366
>gi|334129575|ref|ZP_08503379.1| Carbamoyl phosphate synthetase small subunit [Methyloversatilis
universalis FAM5]
gi|333445260|gb|EGK73202.1| Carbamoyl phosphate synthetase small subunit [Methyloversatilis
universalis FAM5]
Length = 380
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 62/92 (67%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV + +GRV I++QNH +AVDPATLP V VTH++L DG+ G+A+
Sbjct: 285 KFGHHGANHPVKDNDSGRVLITSQNHGFAVDPATLPANVRVTHVSLFDGSLQGMAWTDRP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
Q H EASPGP D +F FV++M+ K
Sbjct: 345 AFCFQGHPEASPGPHDVAYLFDRFVKMMEEGK 376
>gi|388258742|ref|ZP_10135917.1| carbamoyl-phosphate synthase subunit A [Cellvibrio sp. BR]
gi|387937501|gb|EIK44057.1| carbamoyl-phosphate synthase subunit A [Cellvibrio sp. BR]
Length = 403
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 45/92 (48%), Positives = 63/92 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++++ RV I+AQNH +AV+ ++LP + TH +L DG+ G+
Sbjct: 310 KFGHHGGNHPVQDLESKRVMITAQNHGFAVEESSLPANLRATHKSLFDGSLQGIHRTDKA 369
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D+D +F F+ELM++ K
Sbjct: 370 AFSFQGHPEASPGPHDADTLFDHFIELMQARK 401
>gi|110634433|ref|YP_674641.1| carbamoyl phosphate synthase small subunit [Chelativorans sp. BNC1]
gi|110285417|gb|ABG63476.1| carbamoyl-phosphate synthase small subunit [Chelativorans sp. BNC1]
Length = 399
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 62/90 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+GVE TH++L DG+ G++ V
Sbjct: 302 GHHGANHPVKDFTTGKVEIVSMNHGFAVDSDSLPEGVEETHVSLFDGSNCGISLAGRPVF 361
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ L++ K
Sbjct: 362 SVQHHPEASPGPQDSHYLFRRFINLVREKK 391
>gi|451981958|ref|ZP_21930294.1| Carbamoyl-phosphate synthase, small subunit [Nitrospina gracilis
3/211]
gi|451760799|emb|CCQ91570.1| Carbamoyl-phosphate synthase, small subunit [Nitrospina gracilis
3/211]
Length = 375
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
+FGHHGGN P+ + + +VEI++QNH +AVD AT VE+ +NLND T G+ + +L
Sbjct: 284 RFGHHGGNQPIMDSETKKVEITSQNHGFAVDAATAQPDVEIISLNLNDRTVEGIRHKSLP 343
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S+QYH EA+PGP DS +F FV +MK
Sbjct: 344 VFSVQYHPEAAPGPQDSSHLFERFVNMMK 372
>gi|222475280|ref|YP_002563696.1| carbamoyl phosphate synthase small subunit [Anaplasma marginale
str. Florida]
gi|222419417|gb|ACM49440.1| carbamoyl-phosphate synthase, small chain (carA) [Anaplasma
marginale str. Florida]
Length = 405
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 63/93 (67%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
+ GH G NHPV+N+ VE+++QNH +AVD TLP+ EVTHI+L DGT G+
Sbjct: 313 RHGHRGSNHPVYNVATKAVEVTSQNHGFAVDAQTLPENAEVTHISLFDGTIEGMKLLDRP 372
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKY 93
V+S+QYH E PGP DS +FRDFV L ++ ++
Sbjct: 373 VLSVQYHPEGHPGPHDSHYIFRDFVNLARAYRW 405
>gi|255003266|ref|ZP_05278230.1| carbamoyl phosphate synthase small subunit [Anaplasma marginale
str. Puerto Rico]
gi|56388145|gb|AAV86732.1| carbamoyl-phosphate synthase, small chain [Anaplasma marginale str.
St. Maries]
Length = 405
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 63/93 (67%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
+ GH G NHPV+N+ VE+++QNH +AVD TLP+ EVTHI+L DGT G+
Sbjct: 313 RHGHRGSNHPVYNVATKAVEVTSQNHGFAVDAQTLPENAEVTHISLFDGTIEGMKLLDRP 372
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKY 93
V+S+QYH E PGP DS +FRDFV L ++ ++
Sbjct: 373 VLSVQYHPEGHPGPHDSHYIFRDFVNLARAYRW 405
>gi|317058420|ref|ZP_07922905.1| carbamoyl-phosphate synthetase glutaminase subunit [Fusobacterium
sp. 3_1_5R]
gi|313684096|gb|EFS20931.1| carbamoyl-phosphate synthetase glutaminase subunit [Fusobacterium
sp. 3_1_5R]
Length = 357
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/92 (45%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGNHPV ++ + R+ I++QNH YA+D +P+ V+H+++NDGT GL L+
Sbjct: 264 KFGHRGGNHPVKDLDHNRIYITSQNHGYAID--KIPEKARVSHVSMNDGTVEGLKCDDLH 321
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+M++Q+H EA PGP D + +F +F+E++K K
Sbjct: 322 IMTVQFHPEAWPGPTDCEYLFDEFLEVIKGAK 353
>gi|307721881|ref|YP_003893021.1| carbamoyl-phosphate synthase small subunit [Sulfurimonas
autotrophica DSM 16294]
gi|306979974|gb|ADN10009.1| carbamoyl-phosphate synthase small subunit [Sulfurimonas
autotrophica DSM 16294]
Length = 379
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 50/89 (56%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N + G VEI+AQNHNY V P + + VTH NL DGT GL Y
Sbjct: 291 KFGHHGGNHPVKNEKTGLVEITAQNHNYNV-PDNIVEIASVTHTNLFDGTIEGLCYNEAP 349
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S+Q+H EASPGP +S +F +F+ L+K
Sbjct: 350 VFSVQHHPEASPGPKESRYIFNEFLSLIK 378
>gi|312136529|ref|YP_004003866.1| carbamoyl-phosphate synthase small subunit [Methanothermus fervidus
DSM 2088]
gi|311224248|gb|ADP77104.1| carbamoyl-phosphate synthase small subunit [Methanothermus fervidus
DSM 2088]
Length = 357
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/88 (48%), Positives = 63/88 (71%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +I++G V I++QNH +AVD ++ +E+T INLNDGT G+ + L
Sbjct: 267 KFGHRGSNHPVKDIESGEVYITSQNHGFAVDISSSDLPIEITQINLNDGTIEGIKHKELP 326
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
++S+QYH EA PGP D+ +F F+++M
Sbjct: 327 ILSVQYHPEAGPGPYDTRWLFDKFIKIM 354
>gi|410696140|gb|AFV75208.1| carbamoyl-phosphate synthase, small subunit [Thermus oshimai JL-2]
Length = 391
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV N+Q G++EI++QNH YAVD +L K + TH+NLNDGT G+ +
Sbjct: 284 KFGHRGANHPVKNLQTGKIEITSQNHGYAVDIDSL-KDFKPTHVNLNDGTLEGMTHVRYP 342
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
V S+QYH EA+PGP D+ +FR F+E
Sbjct: 343 VFSVQYHPEAAPGPHDALYLFRRFLE 368
>gi|300869381|ref|ZP_07113968.1| carbamoyl phosphate synthase small subunit [Oscillatoria sp. PCC
6506]
gi|300332608|emb|CBN59166.1| carbamoyl phosphate synthase small subunit [Oscillatoria sp. PCC
6506]
Length = 384
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P + R+EI++QNH +A+DP +L VE+TH+NLND T AGL + +L
Sbjct: 289 KFGHRGLNQPAGLTE--RIEITSQNHGFAIDPDSLAADVEITHLNLNDRTVAGLRHKSLP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+QYH EASPGP D+D +F FVE M+
Sbjct: 347 LFSVQYHPEASPGPHDADYLFERFVEAMR 375
>gi|242373489|ref|ZP_04819063.1| carbamoyl phosphate synthase small subunit [Staphylococcus
epidermidis M23864:W1]
gi|242348852|gb|EES40454.1| carbamoyl phosphate synthase small subunit [Staphylococcus
epidermidis M23864:W1]
Length = 366
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G+V+I++QNH Y++D +L +EVTHI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKDLRTGKVDITSQNHGYSIDRDSLKDTDLEVTHIALNDGTVEGLRHKQL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F +F+ +M K +
Sbjct: 326 PAFSVQYHPEARPGPSDSNYLFDEFITMMNEFKEK 360
>gi|434394319|ref|YP_007129266.1| carbamoyl-phosphate synthase small subunit [Gloeocapsa sp. PCC
7428]
gi|428266160|gb|AFZ32106.1| carbamoyl-phosphate synthase small subunit [Gloeocapsa sp. PCC
7428]
Length = 387
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 66/93 (70%), Gaps = 3/93 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G N P Q RVEI++QNH++A+D +LP +E+TH+NLND T AGL + +L
Sbjct: 290 KFGHRGLNQPAGLKQ--RVEITSQNHSFAIDANSLPDADIEITHLNLNDSTVAGLRHKSL 347
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP D+D +F FV+LM+ K
Sbjct: 348 PLFSVQYHPEASPGPHDADYLFEQFVQLMREAK 380
>gi|373487645|ref|ZP_09578312.1| carbamoyl-phosphate synthase small subunit [Holophaga foetida DSM
6591]
gi|372008720|gb|EHP09345.1| carbamoyl-phosphate synthase small subunit [Holophaga foetida DSM
6591]
Length = 360
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 62/89 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV ++ GRVEI+AQNH +AVD A+LP +EVTH +L+D T GL + L
Sbjct: 268 KFGHRGANQPVLDLATGRVEITAQNHGFAVDEASLPSEIEVTHRHLSDDTVEGLRHKNLP 327
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+Q+H EASPGP D+ F FV +M+
Sbjct: 328 IFSMQHHPEASPGPHDARHAFGKFVAMME 356
>gi|226949086|ref|YP_002804177.1| carbamoyl phosphate synthase small subunit [Clostridium botulinum
A2 str. Kyoto]
gi|226844064|gb|ACO86730.1| carbamoyl-phosphate synthase, small subunit [Clostridium botulinum
A2 str. Kyoto]
Length = 349
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/86 (51%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ +V I++QNH Y VD LPK +EVTHI++NDGT G+ + L+
Sbjct: 263 KFGHRGCNHPVKDLKENKVHITSQNHGYFVD--VLPKDMEVTHISVNDGTIEGMKHKNLS 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
+ S+Q+H EA PGP DSD +F +F++
Sbjct: 321 IFSVQFHPEACPGPKDSDYIFDEFMK 346
>gi|168180418|ref|ZP_02615082.1| carbamoyl-phosphate synthase, small subunit [Clostridium botulinum
NCTC 2916]
gi|421834993|ref|ZP_16269885.1| carbamoyl phosphate synthase small subunit [Clostridium botulinum
CFSAN001627]
gi|182668728|gb|EDT80706.1| carbamoyl-phosphate synthase, small subunit [Clostridium botulinum
NCTC 2916]
gi|409743463|gb|EKN42426.1| carbamoyl phosphate synthase small subunit [Clostridium botulinum
CFSAN001627]
Length = 349
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/86 (51%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ +V I++QNH Y VD LPK +EVTHI++NDGT G+ + L+
Sbjct: 263 KFGHRGCNHPVKDLKENKVHITSQNHGYFVD--VLPKDMEVTHISVNDGTIEGMKHKNLS 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
+ S+Q+H EA PGP DSD +F +F++
Sbjct: 321 IFSVQFHPEACPGPKDSDYIFDEFMK 346
>gi|150397429|ref|YP_001327896.1| carbamoyl phosphate synthase small subunit [Sinorhizobium medicae
WSM419]
gi|150028944|gb|ABR61061.1| carbamoyl-phosphate synthase, small subunit [Sinorhizobium medicae
WSM419]
Length = 401
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/90 (53%), Positives = 61/90 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+GVE THI+L DGT GL V
Sbjct: 304 GHHGANHPVKDHTTGKVEIVSMNHGFAVDANSLPQGVEQTHISLFDGTNCGLRVDGRPVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ L++ K
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFLNLIREKK 393
>gi|410694000|ref|YP_003624622.1| Carbamoyl-phosphate synthase small chain (Carbamoyl-phosphate
synthetase glutamine chain) [Thiomonas sp. 3As]
gi|294340425|emb|CAZ88806.1| Carbamoyl-phosphate synthase small chain (Carbamoyl-phosphate
synthetase glutamine chain) [Thiomonas sp. 3As]
Length = 383
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/88 (53%), Positives = 58/88 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ +GRV I++QNH +AVD A+LP V TH++L DGT GLA+
Sbjct: 293 KFGHHGANHPVKDLDSGRVSITSQNHGFAVDAASLPDTVRTTHVSLFDGTLQGLAWKNKP 352
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
Q H EASPGP D +F FV LM
Sbjct: 353 AFCFQGHPEASPGPHDIGYLFDRFVALM 380
>gi|168335072|ref|ZP_02693183.1| carbamoyl phosphate synthase small subunit [Epulopiscium sp. 'N.t.
morphotype B']
Length = 359
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 45/92 (48%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV + + RV I++QNHNY + ATLP G +TH NLND T G+ L+
Sbjct: 264 KFGHHGCNHPVRDFISNRVYITSQNHNYHI--ATLPTGAVITHTNLNDQTVEGMYCKELD 321
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+Q+H EA+PGP D++ +F +F++++K K
Sbjct: 322 IYSVQFHPEAAPGPTDTEHIFDEFIDIIKGGK 353
>gi|149922969|ref|ZP_01911388.1| carbamoyl-phosphate synthase small subunit [Plesiocystis pacifica
SIR-1]
gi|149816155|gb|EDM75664.1| carbamoyl-phosphate synthase small subunit [Plesiocystis pacifica
SIR-1]
Length = 398
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 63/94 (67%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV + ++G + I++QNH +AVD +L +G +TH+NL D T AGL
Sbjct: 296 KFGHHGGNHPVRDERDGSIAITSQNHGFAVDVDSLGEGAALTHLNLFDKTVAGLELTGRP 355
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
V +QYH EASPGP DSD +F+ F ++ + R
Sbjct: 356 VFGVQYHPEASPGPHDSDALFQRFAAQIREFRGR 389
>gi|114848902|gb|ABI83665.1| carbamoylphosphate synthase small subunit [Coxiella endosymbiont of
Amblyomma americanum]
Length = 393
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 61/89 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV NI GR+ I++QNH ++VD LP ++VTH +L DGT G+A+
Sbjct: 299 KFGHHGANHPVQNILTGRIYITSQNHGFSVDEKRLPSTLKVTHRSLFDGTLQGVAHITKP 358
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++ Q H EA+PGP D +FR+F+ L+K
Sbjct: 359 AIAFQGHPEANPGPKDMQGIFREFITLIK 387
>gi|373113557|ref|ZP_09527782.1| carbamoyl-phosphate synthase, small subunit [Fusobacterium
necrophorum subsp. funduliforme 1_1_36S]
gi|371654516|gb|EHO19884.1| carbamoyl-phosphate synthase, small subunit [Fusobacterium
necrophorum subsp. funduliforme 1_1_36S]
Length = 356
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/92 (45%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGNHPV ++ + R+ I++QNH YA+D +P+ V+H+++NDGT GL +L+
Sbjct: 264 KFGHRGGNHPVKDLDHNRIYITSQNHGYAID--NIPEIARVSHVSVNDGTVEGLKCDSLH 321
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+M++Q+H EA PGP D + +F +F+E++K K
Sbjct: 322 IMTVQFHPEAWPGPTDCEYLFDEFLEVVKGAK 353
>gi|189501261|ref|YP_001960731.1| carbamoyl phosphate synthase small subunit [Chlorobium
phaeobacteroides BS1]
gi|189496702|gb|ACE05250.1| carbamoyl-phosphate synthase, small subunit [Chlorobium
phaeobacteroides BS1]
Length = 366
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 64/88 (72%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N+ G +EI++QNH +AV+ ++LP+ +E+TH+NL D T G+ + L
Sbjct: 277 KFGHHGSNHPVKNLSTGSIEITSQNHGFAVEMSSLPEELELTHLNLYDNTVEGVRHRELP 336
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EA+PGP DS+ +F F ++M
Sbjct: 337 CFSVQYHPEAAPGPHDSNYLFSLFTDMM 364
>gi|395226157|ref|ZP_10404654.1| carbamoyl-phosphate synthase, small subunit [Thiovulum sp. ES]
gi|394445661|gb|EJF06548.1| carbamoyl-phosphate synthase, small subunit [Thiovulum sp. ES]
Length = 375
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/91 (53%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N++ G VEI++QNHNY+V P + EV+H NL D T GL Y
Sbjct: 286 KFGHHGGNHPVKNLKTGAVEITSQNHNYSV-PNEIENIAEVSHRNLFDNTIEGLVYKNSP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE-LMKS 90
+ S+Q+H EASPGP +S+ +F+ FVE ++KS
Sbjct: 345 IFSVQHHPEASPGPHESNYIFQQFVEHILKS 375
>gi|340756000|ref|ZP_08692637.1| carbamoyl-phosphate synthase, small subunit [Fusobacterium sp. D12]
gi|419841807|ref|ZP_14365170.1| carbamoyl-phosphate synthase, small subunit [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
gi|421501132|ref|ZP_15948105.1| carbamoyl-phosphate synthase, small subunit [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
gi|313687324|gb|EFS24159.1| carbamoyl-phosphate synthase, small subunit [Fusobacterium sp. D12]
gi|386904182|gb|EIJ68980.1| carbamoyl-phosphate synthase, small subunit [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
gi|402266245|gb|EJU15685.1| carbamoyl-phosphate synthase, small subunit [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
Length = 356
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/92 (45%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGNHPV ++ + R+ I++QNH YA+D +P+ V+H+++NDGT GL +L+
Sbjct: 264 KFGHRGGNHPVKDLDHNRIYITSQNHGYAID--NIPEIARVSHVSVNDGTVEGLKCDSLH 321
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+M++Q+H EA PGP D + +F +F+E++K K
Sbjct: 322 IMTVQFHPEAWPGPTDCEYLFDEFLEVVKGAK 353
>gi|389796669|ref|ZP_10199720.1| carbamoyl phosphate synthase small subunit [Rhodanobacter sp.
116-2]
gi|388448194|gb|EIM04179.1| carbamoyl phosphate synthase small subunit [Rhodanobacter sp.
116-2]
Length = 378
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/95 (49%), Positives = 60/95 (63%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ +GRV I++QNH +AVDPATLP V +TH +L DG+ G A
Sbjct: 284 KFGHHGANHPVKDLDDGRVLITSQNHGFAVDPATLPANVRLTHTSLFDGSLQGFALTDRP 343
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
Q H EASPGP D +F+ F LM+ + A
Sbjct: 344 AFCFQGHPEASPGPLDIGYLFKRFAALMQEARTHA 378
>gi|414165551|ref|ZP_11421798.1| carbamoyl-phosphate synthase small chain [Afipia felis ATCC 53690]
gi|410883331|gb|EKS31171.1| carbamoyl-phosphate synthase small chain [Afipia felis ATCC 53690]
Length = 396
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 61/90 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI++ NH +AVD TLPK VE TH +L D + G+A V
Sbjct: 305 GHHGANHPVKDVTTGKVEITSMNHGFAVDKTTLPKNVEQTHFSLFDDSNCGIALNDKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F F +LM++ K
Sbjct: 365 SVQYHPEASPGPRDSHYLFTRFADLMRAKK 394
>gi|398822540|ref|ZP_10580919.1| carbamoyl-phosphate synthase, small subunit [Bradyrhizobium sp.
YR681]
gi|398226771|gb|EJN13014.1| carbamoyl-phosphate synthase, small subunit [Bradyrhizobium sp.
YR681]
Length = 396
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI++ NH +AVD TLPKG THI+L DG+ G+ V
Sbjct: 305 GHHGANHPVKDETTGKVEITSMNHGFAVDETTLPKGTTQTHISLFDGSNCGIQLDGKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F+ F +LM+ K
Sbjct: 365 SVQYHPEASPGPRDSHYLFQRFADLMRQKK 394
>gi|398354479|ref|YP_006399943.1| carbamoyl-phosphate synthase small subunit [Sinorhizobium fredii
USDA 257]
gi|390129805|gb|AFL53186.1| carbamoyl-phosphate synthase small chain [Sinorhizobium fredii USDA
257]
Length = 401
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 62/90 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+GVE TH++L DGT GL +V
Sbjct: 304 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSKSLPEGVEETHVSLFDGTNCGLRVNGKSVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ L++ K
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFLNLIREKK 393
>gi|378826721|ref|YP_005189453.1| carbamoyl-phosphate synthase small subunit [Sinorhizobium fredii
HH103]
gi|365179773|emb|CCE96628.1| carbamoyl-phosphate synthase small chain [Sinorhizobium fredii
HH103]
Length = 401
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 61/90 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+GVE THI+L DGT GL +
Sbjct: 304 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSKSLPQGVEETHISLFDGTNCGLRVNGKAIF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ L++ K
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFLNLIREKK 393
>gi|167752763|ref|ZP_02424890.1| hypothetical protein ALIPUT_01024 [Alistipes putredinis DSM 17216]
gi|167659832|gb|EDS03962.1| carbamoyl-phosphate synthase, small subunit [Alistipes putredinis
DSM 17216]
Length = 363
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/90 (48%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV N++ G+VEI++QNH++AVD +L G+ +TH+NL D T G+ A
Sbjct: 269 KFGHRGGNHPVKNLETGKVEITSQNHSFAVDTESLKGTGLTLTHLNLLDDTAEGVECRAD 328
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+QYH E++PGP DS +F F+++M+
Sbjct: 329 RIFSVQYHPESAPGPQDSTYLFDKFIKMME 358
>gi|74317145|ref|YP_314885.1| carbamoyl-phosphate synthase small subunit [Thiobacillus
denitrificans ATCC 25259]
gi|74056640|gb|AAZ97080.1| Carbamoyl-phosphate synthase, small subunit [Thiobacillus
denitrificans ATCC 25259]
Length = 379
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 60/88 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ +GRV I++QNH +AVDPATLP + TH++L DG+ GLA
Sbjct: 285 KFGHHGANHPVKDLDSGRVTITSQNHGFAVDPATLPANLRSTHVSLFDGSLQGLARTDAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
S Q H EA+PGP D +F F++LM
Sbjct: 345 AFSFQGHPEAAPGPHDLSYLFDRFIQLM 372
>gi|83309800|ref|YP_420064.1| carbamoylphosphate synthase small subunit [Magnetospirillum
magneticum AMB-1]
gi|82944641|dbj|BAE49505.1| Carbamoylphosphate synthase small subunit [Magnetospirillum
magneticum AMB-1]
Length = 349
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/87 (51%), Positives = 61/87 (70%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G NHPV +++ G+VEI++QNH + VD +LP GV+VTH +L DG+ G+A V
Sbjct: 260 GHRGANHPVKDLETGKVEITSQNHGFVVDEKSLPAGVKVTHRSLFDGSVEGIAVDGKPVF 319
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMK 89
S+QYH EASPGP D+ +F FV LM+
Sbjct: 320 SVQYHPEASPGPQDAHYLFERFVGLME 346
>gi|334365289|ref|ZP_08514250.1| carbamoyl-phosphate synthase, small subunit [Alistipes sp. HGB5]
gi|313158593|gb|EFR57987.1| carbamoyl-phosphate synthase, small subunit [Alistipes sp. HGB5]
Length = 354
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV N+ G++EI++QNH+YAVD +L G+E+TH+NL DGT G+
Sbjct: 260 KFGHRGGNHPVKNLATGKIEITSQNHSYAVDVDSLAGTGLELTHVNLLDGTAEGVECVGD 319
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+QYH E++ GP DS +FR F ++M+ K
Sbjct: 320 AVFSMQYHPESASGPQDSGYLFRKFTKIMEERK 352
>gi|334317078|ref|YP_004549697.1| carbamoyl-phosphate synthase small subunit [Sinorhizobium meliloti
AK83]
gi|334096072|gb|AEG54083.1| carbamoyl-phosphate synthase, small subunit [Sinorhizobium meliloti
AK83]
Length = 401
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/90 (53%), Positives = 61/90 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+GVE THI+L DGT GL V
Sbjct: 304 GHHGANHPVKDHTTGKVEIVSMNHGFAVDANSLPQGVEQTHISLFDGTNCGLRVDGRPVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ L++ K
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFLNLIREKK 393
>gi|296122281|ref|YP_003630059.1| carbamoyl-phosphate synthase small subunit [Planctomyces
limnophilus DSM 3776]
gi|296014621|gb|ADG67860.1| carbamoyl-phosphate synthase, small subunit [Planctomyces
limnophilus DSM 3776]
Length = 383
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/88 (51%), Positives = 58/88 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV N++N +VEI++QNH +A+D TLP +EVTH NLND T G+
Sbjct: 287 KFGHRGANQPVMNLRNSKVEITSQNHGFAIDALTLPANIEVTHRNLNDQTIEGMRLTDQP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EA+ GP DS +F +F LM
Sbjct: 347 AFSVQYHPEAAAGPHDSAYLFEEFCSLM 374
>gi|119358227|ref|YP_912871.1| carbamoyl phosphate synthase small subunit [Chlorobium
phaeobacteroides DSM 266]
gi|119355576|gb|ABL66447.1| carbamoyl-phosphate synthase small subunit [Chlorobium
phaeobacteroides DSM 266]
Length = 369
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 61/92 (66%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV NI ++EI++QNH +AV TLP+ + +TH+NL D T G+ + L
Sbjct: 277 KFGHHGSNHPVKNISTSKIEITSQNHGFAVKMDTLPEKLSLTHVNLYDHTVEGIRHRELP 336
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EA+PGP DS +F +F LM K
Sbjct: 337 CFSVQYHPEAAPGPHDSHYLFDEFTALMDQAK 368
>gi|421597760|ref|ZP_16041310.1| carbamoyl phosphate synthase small subunit [Bradyrhizobium sp.
CCGE-LA001]
gi|404270129|gb|EJZ34259.1| carbamoyl phosphate synthase small subunit [Bradyrhizobium sp.
CCGE-LA001]
Length = 396
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI++ NH +AVD TLPKG THI+L DG+ G+ V
Sbjct: 305 GHHGANHPVKDETTGKVEITSMNHGFAVDETTLPKGATQTHISLFDGSNCGIQLDGKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F+ F +LM+ K
Sbjct: 365 SVQYHPEASPGPRDSHYLFQRFADLMRQKK 394
>gi|424871662|ref|ZP_18295324.1| carbamoyl-phosphate synthase, small subunit [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|393167363|gb|EJC67410.1| carbamoyl-phosphate synthase, small subunit [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 403
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/90 (53%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE THI+L DGT GL V
Sbjct: 306 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSKSLPDGVEETHISLFDGTNCGLRVLGKQVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR FV +++ K
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFVNMVREKK 395
>gi|262091723|gb|ACY25313.1| carbamoyl-phosphate synthase small subunit [uncultured
actinobacterium]
Length = 359
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 58/88 (65%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGHHG NHPV N+ G VEI++QNHN+ VDP +L +VTH NLND T G+ N
Sbjct: 270 FGHHGANHPVRNLSTGAVEITSQNHNFCVDPLSLSGIAQVTHTNLNDNTNEGMRVIGANA 329
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMK 89
S+QYH EA PGP DS +F +F +M+
Sbjct: 330 FSVQYHPEAGPGPHDSRYLFAEFKTMME 357
>gi|296136190|ref|YP_003643432.1| carbamoyl-phosphate synthase small subunit [Thiomonas intermedia
K12]
gi|295796312|gb|ADG31102.1| carbamoyl-phosphate synthase, small subunit [Thiomonas intermedia
K12]
Length = 383
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/88 (53%), Positives = 58/88 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ +GRV I++QNH +AVD A+LP V TH++L DGT GLA+
Sbjct: 293 KFGHHGANHPVKDLDSGRVSITSQNHGFAVDAASLPDTVRTTHVSLFDGTLQGLAWKDKP 352
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
Q H EASPGP D +F FV LM
Sbjct: 353 AFCFQGHPEASPGPHDIGYLFDRFVALM 380
>gi|429124088|ref|ZP_19184620.1| carbamoyl phosphate synthase small subunit [Brachyspira hampsonii
30446]
gi|426279818|gb|EKV56837.1| carbamoyl phosphate synthase small subunit [Brachyspira hampsonii
30446]
Length = 361
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV +++ G+V I++QNH+YAV +L + +THI+LNDG+C G+ +
Sbjct: 264 KFGHRGGNHPVKDLETGKVSITSQNHSYAVKAESLSNTDLIMTHISLNDGSCEGVKHKRY 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
V S+QYH E+SPGP+DS +F +F+E++ +
Sbjct: 324 PVFSVQYHPESSPGPEDSKYLFDNFIEMINN 354
>gi|418637545|ref|ZP_13199864.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
lugdunensis VCU139]
gi|374838791|gb|EHS02326.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
lugdunensis VCU139]
Length = 366
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G+V+I++QNH YA+D +L + +E+THI LND T GL + L
Sbjct: 266 KFGHRGANHPVKDLRTGKVDITSQNHGYAIDKDSLAQTDLEITHIALNDDTVEGLRHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F DF+ ++ K +
Sbjct: 326 PAFSVQYHPEARPGPSDSNYLFDDFIAMINEFKEK 360
>gi|289551016|ref|YP_003471920.1| carbamoyl-phosphate synthase small chain [Staphylococcus
lugdunensis HKU09-01]
gi|385784637|ref|YP_005760810.1| putative carbamoyl-phosphate synthase,pyrimidine-specific, small
chain [Staphylococcus lugdunensis N920143]
gi|418414312|ref|ZP_12987527.1| carbamoyl-phosphate synthase small chain [Staphylococcus
lugdunensis ACS-027-V-Sch2]
gi|289180548|gb|ADC87793.1| Carbamoyl-phosphate synthase small chain [Staphylococcus
lugdunensis HKU09-01]
gi|339894893|emb|CCB54192.1| putative carbamoyl-phosphate synthase,pyrimidine-specific, small
chain [Staphylococcus lugdunensis N920143]
gi|410876919|gb|EKS24816.1| carbamoyl-phosphate synthase small chain [Staphylococcus
lugdunensis ACS-027-V-Sch2]
Length = 366
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G+V+I++QNH YA+D +L + +E+THI LND T GL + L
Sbjct: 266 KFGHRGANHPVKDLRTGKVDITSQNHGYAIDKDSLAQTDLEITHIALNDDTVEGLRHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F DF+ ++ K +
Sbjct: 326 PAFSVQYHPEARPGPSDSNYLFDDFIAMINEFKEK 360
>gi|417098557|ref|ZP_11959736.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) protein, small
chain [Rhizobium etli CNPAF512]
gi|327192720|gb|EGE59657.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) protein, small
chain [Rhizobium etli CNPAF512]
Length = 403
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE THI+L DGT GL V
Sbjct: 306 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSKSLPDGVEETHISLFDGTNCGLRVLGKQVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ +++ K
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINMVRKKK 395
>gi|313891617|ref|ZP_07825224.1| carbamoyl-phosphate synthase, small subunit [Dialister
microaerophilus UPII 345-E]
gi|329122074|ref|ZP_08250682.1| carbamoyl-phosphate synthase, small subunit [Dialister
micraerophilus DSM 19965]
gi|313119895|gb|EFR43080.1| carbamoyl-phosphate synthase, small subunit [Dialister
microaerophilus UPII 345-E]
gi|327466881|gb|EGF12397.1| carbamoyl-phosphate synthase, small subunit [Dialister
micraerophilus DSM 19965]
Length = 355
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 63/91 (69%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGH G NHPV +++ G+V I++QNH YAV +P +E+THIN+ND T G + L +
Sbjct: 263 FGHRGSNHPVKDLRKGKVYITSQNHGYAVSSENIPDCIEITHINVNDNTVEGFRHKTLPI 322
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
++QYH EA PGP D+ +F +F+++M++ K
Sbjct: 323 QAIQYHPEAGPGPVDNFYLFEEFIKMMEAEK 353
>gi|209965301|ref|YP_002298216.1| carbamoyl-phosphate synthase small subunit [Rhodospirillum centenum
SW]
gi|209958767|gb|ACI99403.1| carbamoyl-phosphate synthase, small subunit [Rhodospirillum
centenum SW]
Length = 397
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/87 (52%), Positives = 61/87 (70%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G NHPV ++ GRVEI++QNH + V P +LP+ VEVTH++L DGT GL V
Sbjct: 308 GHRGANHPVKDLATGRVEITSQNHGFVVVPESLPETVEVTHVSLFDGTNEGLRLKGRPVF 367
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMK 89
S+QYH EASPGP DS +F+ FV+ ++
Sbjct: 368 SVQYHPEASPGPQDSHYLFQRFVDAIE 394
>gi|410943511|ref|ZP_11375252.1| carbamoyl phosphate synthase small subunit [Gluconobacter frateurii
NBRC 101659]
Length = 453
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/86 (52%), Positives = 61/86 (70%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G N PV +I++GRVEI++QNH +AVD +LP V+VTH++L DG+ G+A +
Sbjct: 360 GHRGANQPVKDIESGRVEITSQNHGFAVDEKSLPADVKVTHVSLFDGSNEGIASTTKDAF 419
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EASPGP DS +F FV +M
Sbjct: 420 SVQYHPEASPGPSDSFYLFERFVAVM 445
>gi|410466047|ref|ZP_11319193.1| carbamoyl-phosphate synthase, small subunit [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409980929|gb|EKO37577.1| carbamoyl-phosphate synthase, small subunit [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 375
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++Q GR+EIS+QNH + VD +L VE+TH+NLND T G A+
Sbjct: 283 KFGHHGLNHPVKDLQTGRIEISSQNHGFCVDIESLSD-VELTHVNLNDNTLEGFAHKKKP 341
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V+++QYH EA+PGP DS F F L++
Sbjct: 342 VIAIQYHPEAAPGPHDSRYFFSRFRNLVR 370
>gi|409438426|ref|ZP_11265505.1| carbamoyl phosphate synthetase small subunit,glutamine
amidotransferase [Rhizobium mesoamericanum STM3625]
gi|408749977|emb|CCM76678.1| carbamoyl phosphate synthetase small subunit,glutamine
amidotransferase [Rhizobium mesoamericanum STM3625]
Length = 401
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 61/90 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE TH++L DGT GL +
Sbjct: 304 GHHGANHPVKDHTTGKVEIVSMNHGFAVDTKSLPDGVEETHVSLFDGTNCGLRVSGKPIF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ L+++ K
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFINLVRAKK 393
>gi|23013682|ref|ZP_00053550.1| COG0505: Carbamoylphosphate synthase small subunit
[Magnetospirillum magnetotacticum MS-1]
Length = 401
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/87 (51%), Positives = 61/87 (70%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G NHPV +++ G+VEI++QNH + VD +LP GV+VTH +L DG+ G+A V
Sbjct: 312 GHRGANHPVKDLETGKVEITSQNHGFVVDEKSLPAGVKVTHRSLFDGSVEGIALEGKPVF 371
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMK 89
S+QYH EASPGP D+ +F FV LM+
Sbjct: 372 SVQYHPEASPGPQDAHYLFERFVGLME 398
>gi|190892708|ref|YP_001979250.1| carbamoyl phosphate synthase small subunit [Rhizobium etli CIAT
652]
gi|190697987|gb|ACE92072.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) protein, small
chain [Rhizobium etli CIAT 652]
Length = 401
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE THI+L DGT GL V
Sbjct: 304 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSKSLPDGVEETHISLFDGTNCGLRVLGKQVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ +++ K
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFINMVREKK 393
>gi|114797494|ref|YP_761570.1| carbamoyl-phosphate synthase small subunit [Hyphomonas neptunium
ATCC 15444]
gi|123027730|sp|Q0BY73.1|CARA_HYPNA RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|114737668|gb|ABI75793.1| carbamoyl-phosphate synthase, small subunit [Hyphomonas neptunium
ATCC 15444]
Length = 386
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/93 (52%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI + NH + VDP TLP GVE +H +L DGT +GLA ++
Sbjct: 295 GHHGANHPVKDLATGKVEIVSMNHGFTVDPDTLPPGVEESHRSLFDGTNSGLAVKGKPII 354
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +F F LM+ YRA
Sbjct: 355 SVQHHPEASPGPQDSFYLFTRFAGLMRD--YRA 385
>gi|414343044|ref|YP_006984565.1| carbamoyl phosphate synthase small subunit [Gluconobacter oxydans
H24]
gi|411028379|gb|AFW01634.1| carbamoyl phosphate synthase small subunit [Gluconobacter oxydans
H24]
Length = 457
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/86 (52%), Positives = 61/86 (70%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G N PV +I++GRVEI++QNH +AVD +LP V+VTH++L DG+ G+A +
Sbjct: 360 GHRGANQPVKDIESGRVEITSQNHGFAVDEKSLPADVKVTHVSLFDGSNEGIASTTKDAF 419
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EASPGP DS +F FV +M
Sbjct: 420 SVQYHPEASPGPSDSFYLFERFVAVM 445
>gi|315658511|ref|ZP_07911383.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
lugdunensis M23590]
gi|315496840|gb|EFU85163.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
lugdunensis M23590]
Length = 375
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G+V+I++QNH YA+D +L + +E+THI LND T GL + L
Sbjct: 275 KFGHRGANHPVKDLRTGKVDITSQNHGYAIDKDSLAQTDLEITHIALNDDTVEGLRHKTL 334
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F DF+ ++ K +
Sbjct: 335 PAFSVQYHPEARPGPSDSNYLFDDFIAMINEFKEK 369
>gi|421493483|ref|ZP_15940839.1| CARA [Morganella morganii subsp. morganii KT]
gi|455738009|ref|YP_007504275.1| Carbamoyl-phosphate synthase small chain [Morganella morganii
subsp. morganii KT]
gi|400192233|gb|EJO25373.1| CARA [Morganella morganii subsp. morganii KT]
gi|455419572|gb|AGG29902.1| Carbamoyl-phosphate synthase small chain [Morganella morganii
subsp. morganii KT]
Length = 379
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 63/93 (67%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I+N V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDIENNVVMITAQNHGFAVDEATLPATLRVTHKSLFDGTLQGIHRNDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKY 93
S Q H EASPGP D+ +F F+ELMK+ ++
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELMKNARH 379
>gi|383754514|ref|YP_005433417.1| putative carbamoyl-phosphate synthase small subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381366566|dbj|BAL83394.1| putative carbamoyl-phosphate synthase small subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 356
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH G N PV +++ G+V+IS+QNH YAV+ +L +EVTHIN+NDGT G+ + L
Sbjct: 265 KFGHRGSNQPVKDLRTGKVQISSQNHGYAVEEESLKDLPLEVTHINVNDGTVEGVRHTEL 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+QYH EASPGPDD+ +F +F ++K
Sbjct: 325 PLFSVQYHPEASPGPDDNLYLFDEFWTMLK 354
>gi|336422502|ref|ZP_08602646.1| carbamoyl-phosphate synthase, small subunit [Lachnospiraceae
bacterium 5_1_57FAA]
gi|336008428|gb|EGN38446.1| carbamoyl-phosphate synthase, small subunit [Lachnospiraceae
bacterium 5_1_57FAA]
Length = 356
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/93 (48%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
K+GH GGNHPV ++ + RV IS+QNH YAVD +T+ P + IN+NDGT GL+Y
Sbjct: 264 KYGHRGGNHPVKDLSSNRVYISSQNHGYAVDASTMDPSIAKEAFINVNDGTNEGLSYEGK 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
N+ ++Q+H EA PGP DS +F F+++MK +
Sbjct: 324 NIFTVQFHPEACPGPQDSGYLFDRFMDMMKGAR 356
>gi|453330378|dbj|GAC87606.1| carbamoyl phosphate synthase small subunit [Gluconobacter
thailandicus NBRC 3255]
Length = 457
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/86 (52%), Positives = 61/86 (70%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G N PV +I++GRVEI++QNH +AVD +LP V+VTH++L DG+ G+A +
Sbjct: 360 GHRGANQPVKDIESGRVEITSQNHGFAVDEKSLPADVKVTHVSLFDGSNEGIASTTKDAF 419
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EASPGP DS +F FV +M
Sbjct: 420 SVQYHPEASPGPSDSFYLFERFVAVM 445
>gi|75910607|ref|YP_324903.1| carbamoyl phosphate synthase small subunit [Anabaena variabilis
ATCC 29413]
gi|75704332|gb|ABA24008.1| carbamoyl-phosphate synthase small subunit [Anabaena variabilis
ATCC 29413]
Length = 388
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
KFGH G N P Q RVEI++QNH++A+DP +LP+ V E++H+NLND T AGL + +L
Sbjct: 290 KFGHRGLNQPAGLQQ--RVEITSQNHSFAIDPDSLPEAVVEISHLNLNDRTVAGLRHKSL 347
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP D+D +F FV M++ K
Sbjct: 348 PIFSVQYHPEASPGPHDADYLFAQFVHQMRTTK 380
>gi|209550286|ref|YP_002282203.1| carbamoyl phosphate synthase small subunit [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|209536042|gb|ACI55977.1| carbamoyl-phosphate synthase, small subunit [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 403
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE THI+L DGT GL V
Sbjct: 306 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSKSLPDGVEETHISLFDGTNCGLRVLGKQVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ +++ K
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINMVREKK 395
>gi|340758987|ref|ZP_08695564.1| carbamoyl-phosphate synthase small subunit [Fusobacterium varium
ATCC 27725]
gi|340577392|gb|EES64408.2| carbamoyl-phosphate synthase small subunit [Fusobacterium varium
ATCC 27725]
Length = 350
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/89 (47%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K+GH G NHPV +++ ++ I++QNH Y VD +P+ +EVTHINLND + G+ L
Sbjct: 263 KYGHRGCNHPVKDLEKNKIFITSQNHGYVVD--NVPEAMEVTHINLNDNSIEGMKSKELR 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+M +QYH EA PGP DSD +F DF+++++
Sbjct: 321 IMCVQYHPEAWPGPSDSDYLFDDFLQIIE 349
>gi|241205667|ref|YP_002976763.1| carbamoyl phosphate synthase small subunit [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240859557|gb|ACS57224.1| carbamoyl-phosphate synthase, small subunit [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 403
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE THI+L DGT GL V
Sbjct: 306 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSKSLPDGVEETHISLFDGTNCGLRVLGKQVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ +++ K
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINMVREKK 395
>gi|85715959|ref|ZP_01046936.1| carbamoyl-phosphate synthase small subunit [Nitrobacter sp.
Nb-311A]
gi|85697157|gb|EAQ35038.1| carbamoyl-phosphate synthase small subunit [Nitrobacter sp.
Nb-311A]
Length = 396
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 62/90 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI++ NH +AVD ATLPKG + TH++L DG+ G+ V
Sbjct: 305 GHHGANHPVRDETTGKVEITSMNHGFAVDHATLPKGAKQTHVSLFDGSNCGIELEGKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F+ F +LM+ K
Sbjct: 365 SVQYHPEASPGPRDSHYLFKRFADLMRENK 394
>gi|406924540|gb|EKD61292.1| hypothetical protein ACD_54C00300G0001 [uncultured bacterium]
Length = 386
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 62/90 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI++ NH + VD TLPKGV TH++L DG+ G+A +
Sbjct: 295 GHHGANHPVKDLTTGKVEITSMNHGFTVDSQTLPKGVSETHVSLFDGSNCGIAVDGKPIF 354
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F FVE +++ +
Sbjct: 355 SVQYHPEASPGPQDSYYLFERFVEAIRARR 384
>gi|325293531|ref|YP_004279395.1| carbamoyl-phosphate synthase small subunit [Agrobacterium sp.
H13-3]
gi|325061384|gb|ADY65075.1| carbamoyl-phosphate synthase small chain [Agrobacterium sp. H13-3]
Length = 401
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/87 (54%), Positives = 58/87 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE TH +L DGT GL V
Sbjct: 304 GHHGANHPVKDFTTGKVEIVSMNHGFAVDAKSLPDGVEETHTSLFDGTNCGLRIVGKPVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMK 89
S+Q+H EASPGP DS +FR FV L++
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFVNLLR 390
>gi|418407157|ref|ZP_12980475.1| carbamoyl phosphate synthase small subunit [Agrobacterium
tumefaciens 5A]
gi|358006301|gb|EHJ98625.1| carbamoyl phosphate synthase small subunit [Agrobacterium
tumefaciens 5A]
Length = 401
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/87 (54%), Positives = 58/87 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE TH +L DGT GL V
Sbjct: 304 GHHGANHPVKDFTTGKVEIVSMNHGFAVDAKSLPDGVEETHTSLFDGTNCGLRIVGKPVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMK 89
S+Q+H EASPGP DS +FR FV L++
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFVNLLR 390
>gi|424918768|ref|ZP_18342132.1| carbamoyl-phosphate synthase, small subunit [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|392854944|gb|EJB07465.1| carbamoyl-phosphate synthase, small subunit [Rhizobium
leguminosarum bv. trifolii WSM597]
Length = 403
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE THI+L DGT GL V
Sbjct: 306 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSKSLPDGVEETHISLFDGTNCGLRVLGKQVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ +++ K
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINMVREKK 395
>gi|424882586|ref|ZP_18306218.1| carbamoyl-phosphate synthase, small subunit [Rhizobium
leguminosarum bv. trifolii WU95]
gi|392518949|gb|EIW43681.1| carbamoyl-phosphate synthase, small subunit [Rhizobium
leguminosarum bv. trifolii WU95]
Length = 418
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE THI+L DGT GL V
Sbjct: 321 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSKSLPDGVEETHISLFDGTNCGLRVLGKQVF 380
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ +++ K
Sbjct: 381 SVQHHPEASPGPQDSHYLFRRFINMVREKK 410
>gi|161501792|ref|YP_768991.2| carbamoyl phosphate synthase small subunit [Rhizobium leguminosarum
bv. viciae 3841]
Length = 401
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE THI+L DGT GL V
Sbjct: 304 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSKSLPDGVEETHISLFDGTNCGLRVLGKQVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ +++ K
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFINMVREKK 393
>gi|440227324|ref|YP_007334415.1| carbamoyl-phosphate synthase, small subunit [Rhizobium tropici CIAT
899]
gi|440038835|gb|AGB71869.1| carbamoyl-phosphate synthase, small subunit [Rhizobium tropici CIAT
899]
Length = 405
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/93 (51%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+GVE THI+L DG+ GL V
Sbjct: 307 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSKSLPEGVEETHISLFDGSNCGLRVSGKPVF 366
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR F+ L++ K A
Sbjct: 367 SVQHHPEASPGPQDSHYLFRRFINLVREKKGEA 399
>gi|198282926|ref|YP_002219247.1| carbamoyl-phosphate synthase small subunit [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218667825|ref|YP_002425129.1| carbamoyl-phosphate synthase small subunit [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198247447|gb|ACH83040.1| carbamoyl-phosphate synthase, small subunit [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218520038|gb|ACK80624.1| carbamoyl-phosphate synthase, small subunit [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 380
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++++GRV I++QNH +AVD TLP+ + TH +L DG+ G+A+ L
Sbjct: 284 KFGHHGANHPVKDLRSGRVLITSQNHGFAVDADTLPECLVATHASLFDGSLQGMAHRELP 343
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
V S Q H EA PGP D+ +F DFV M
Sbjct: 344 VFSFQGHPEAGPGPHDARAIFDDFVHAM 371
>gi|90422479|ref|YP_530849.1| carbamoyl phosphate synthase small subunit [Rhodopseudomonas
palustris BisB18]
gi|90104493|gb|ABD86530.1| carbamoyl-phosphate synthase small subunit [Rhodopseudomonas
palustris BisB18]
Length = 396
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 62/90 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV +I G+VEI++ NH +AVD TLP V+ TH++L D + G+A V
Sbjct: 305 GHHGANHPVKDITTGKVEITSMNHGFAVDKTTLPGNVQQTHVSLFDDSNCGIALADKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F+ F +LM++ K
Sbjct: 365 SVQYHPEASPGPRDSHYLFKRFADLMRAKK 394
>gi|456352929|dbj|BAM87374.1| carbamoyl phosphate synthase small subunit [Agromonas oligotrophica
S58]
Length = 398
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/93 (51%), Positives = 60/93 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI++ NH +AVD TLP G THI+L DG+ G+ V
Sbjct: 305 GHHGANHPVKDETTGKVEITSMNHGFAVDQNTLPSGATQTHISLFDGSNCGIQLDGKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EASPGP DS +F+ F ELM+ K A
Sbjct: 365 SVQYHPEASPGPRDSHYLFQRFAELMRDKKRSA 397
>gi|338971887|ref|ZP_08627266.1| carbamoyl-phosphate synthase small chain [Bradyrhizobiaceae
bacterium SG-6C]
gi|414168625|ref|ZP_11424588.1| carbamoyl-phosphate synthase small chain [Afipia clevelandensis
ATCC 49720]
gi|338234781|gb|EGP09892.1| carbamoyl-phosphate synthase small chain [Bradyrhizobiaceae
bacterium SG-6C]
gi|410887361|gb|EKS35171.1| carbamoyl-phosphate synthase small chain [Afipia clevelandensis
ATCC 49720]
Length = 396
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI++ NH +AVD TLP VE THI+L D + G+A V
Sbjct: 305 GHHGANHPVKDLTTGKVEITSMNHGFAVDKTTLPGNVEQTHISLFDDSNCGIALKDKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F F +LM+ K
Sbjct: 365 SVQYHPEASPGPRDSHYLFTRFADLMRQKK 394
>gi|86358559|ref|YP_470451.1| carbamoyl phosphate synthase small subunit [Rhizobium etli CFN 42]
gi|86282661|gb|ABC91724.1| carbamoyl-phosphate synthase small chain (glutamine-hydrolysing)
protein [Rhizobium etli CFN 42]
Length = 401
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE THI+L DGT GL V
Sbjct: 304 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSKSLPDGVEETHISLFDGTNCGLRVLGKQVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ +++ K
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFINMVREKK 393
>gi|376001445|ref|ZP_09779315.1| Carbamoyl-phosphate synthase small chain [Arthrospira sp. PCC 8005]
gi|375330274|emb|CCE15068.1| Carbamoyl-phosphate synthase small chain [Arthrospira sp. PCC 8005]
Length = 384
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/92 (51%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P ++ +VEI++QNH +A+DP +L + VE+TH+NLND T AGL + L
Sbjct: 294 KFGHRGLNQPA-GLEKRQVEITSQNHGFALDPDSLAEDVEITHLNLNDRTVAGLKHKTLP 352
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP D+D +F FV+ M+ K
Sbjct: 353 LFSVQYHPEASPGPHDADYLFEQFVKEMEKGK 384
>gi|209523279|ref|ZP_03271835.1| carbamoyl-phosphate synthase, small subunit [Arthrospira maxima
CS-328]
gi|423066541|ref|ZP_17055331.1| carbamoyl-phosphate synthase small subunit [Arthrospira platensis
C1]
gi|209496430|gb|EDZ96729.1| carbamoyl-phosphate synthase, small subunit [Arthrospira maxima
CS-328]
gi|406711849|gb|EKD07047.1| carbamoyl-phosphate synthase small subunit [Arthrospira platensis
C1]
Length = 384
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/92 (51%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P ++ +VEI++QNH +A+DP +L + VE+TH+NLND T AGL + L
Sbjct: 294 KFGHRGLNQPA-GLEKRQVEITSQNHGFALDPDSLAEDVEITHLNLNDRTVAGLKHKTLP 352
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP D+D +F FV+ M+ K
Sbjct: 353 LFSVQYHPEASPGPHDADYLFEQFVKEMEKGK 384
>gi|117926299|ref|YP_866916.1| carbamoyl-phosphate synthase small subunit [Magnetococcus marinus
MC-1]
gi|117610055|gb|ABK45510.1| carbamoyl-phosphate synthase small subunit [Magnetococcus marinus
MC-1]
Length = 377
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 60/89 (67%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGNHPV N+ G VE+++QNH + V + LP +EVTH +L DG+ G+
Sbjct: 289 KFGHRGGNHPVQNLSTGVVEVTSQNHGFVVSDSALPDTLEVTHRSLFDGSVEGVRMKDKP 348
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S+QYH EASPGP D+ +F+ F +LM+
Sbjct: 349 VFSVQYHPEASPGPHDAHYLFKQFADLMR 377
>gi|119487912|ref|ZP_01621409.1| carbamoyl-phosphate synthase small subunit [Lyngbya sp. PCC 8106]
gi|119455488|gb|EAW36626.1| carbamoyl-phosphate synthase small subunit [Lyngbya sp. PCC 8106]
Length = 383
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/92 (52%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P +Q +VEI++QNH +A++P +L GVE+TH+NLND T AGL + L
Sbjct: 292 KFGHRGLNQPA-GLQR-QVEITSQNHGFAINPDSLADGVEITHLNLNDRTVAGLKHKNLP 349
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+D +F FV+ M+ K
Sbjct: 350 FFSVQYHPEASPGPHDADYLFEQFVQQMEKSK 381
>gi|115257801|emb|CAK08899.1| putative carbamoyl-phosphate synthase small chain [Rhizobium
leguminosarum bv. viciae 3841]
Length = 417
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE THI+L DGT GL V
Sbjct: 320 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSKSLPDGVEETHISLFDGTNCGLRVLGKQVF 379
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ +++ K
Sbjct: 380 SVQHHPEASPGPQDSHYLFRRFINMVREKK 409
>gi|374291473|ref|YP_005038508.1| carbamoyl phosphate synthetase, small subunit [Azospirillum
lipoferum 4B]
gi|357423412|emb|CBS86269.1| carbamoyl phosphate synthetase, small subunit [Azospirillum
lipoferum 4B]
Length = 390
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G NHPV ++ +GRVEI++QNH + V P TLP EVTH++L DGT G+ V
Sbjct: 299 GHRGANHPVKDLASGRVEITSQNHGFVVMPETLPADAEVTHVSLFDGTNEGIRLKGKPVF 358
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F FV+L+ K
Sbjct: 359 SVQYHPEASPGPQDSHYLFDRFVQLIAEKK 388
>gi|320449372|ref|YP_004201468.1| carbamoyl-phosphate synthase small subunit [Thermus scotoductus
SA-01]
gi|320149541|gb|ADW20919.1| carbamoyl-phosphate synthase, small, subunit [Thermus scotoductus
SA-01]
Length = 391
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/86 (55%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV N+ G++EI++QNH YAVD +L K + THINLNDGT G+A+
Sbjct: 284 KFGHRGANHPVKNLLTGKIEITSQNHGYAVDIDSL-KEFKPTHINLNDGTLEGMAHARYP 342
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
V S+QYH EA+PGP D+ +FR F+E
Sbjct: 343 VFSVQYHPEAAPGPHDALYLFRRFLE 368
>gi|315122136|ref|YP_004062625.1| carbamoyl phosphate synthase small subunit [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495538|gb|ADR52137.1| carbamoyl phosphate synthase small subunit [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 402
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV N+ NGRVEI + NH +A+D TLP G+E THI+L D + GL V
Sbjct: 304 GHHGANHPVKNLSNGRVEIVSMNHGFAIDTNTLPAGLEETHISLFDNSNCGLRLVDRPVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH E+SPGP DS +F FV+ M+ K
Sbjct: 364 SVQYHPESSPGPQDSYYLFSTFVDFMRQRK 393
>gi|237748687|ref|ZP_04579167.1| multifunctional protein CAD [Oxalobacter formigenes OXCC13]
gi|229380049|gb|EEO30140.1| multifunctional protein CAD [Oxalobacter formigenes OXCC13]
Length = 382
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/92 (51%), Positives = 60/92 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV +I+ G+V I++QNH +AVD +TLP +VTH +L DG+ G A
Sbjct: 288 KFGHHGANHPVQDIETGKVLITSQNHGFAVDESTLPSNCKVTHKSLFDGSLQGFARTDKP 347
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
Q H EASPGP D D +F FV LM++ K
Sbjct: 348 AFCFQGHPEASPGPGDVDYLFDRFVGLMETAK 379
>gi|333910516|ref|YP_004484249.1| carbamoyl-phosphate synthase small subunit [Methanotorris igneus
Kol 5]
gi|333751105|gb|AEF96184.1| carbamoyl-phosphate synthase, small subunit [Methanotorris igneus
Kol 5]
Length = 356
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 60/91 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGN PV ++ GRV I++QNH +A +LP VEV HINLND T G+ + L
Sbjct: 266 KFGHRGGNQPVKDLTTGRVYITSQNHGFATKEDSLPDDVEVMHINLNDNTVEGIRHKNLP 325
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSV 91
+ S+QYH EA PGP D+ +F + ++L +V
Sbjct: 326 IWSVQYHPEAGPGPHDAKFLFDEMIKLKDAV 356
>gi|434402641|ref|YP_007145526.1| carbamoyl-phosphate synthase small subunit [Cylindrospermum
stagnale PCC 7417]
gi|428256896|gb|AFZ22846.1| carbamoyl-phosphate synthase small subunit [Cylindrospermum
stagnale PCC 7417]
Length = 388
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 49/96 (51%), Positives = 68/96 (70%), Gaps = 3/96 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
KFGH G N P Q RVEI++QNH++A+DP +LP V EV+H+NLND T AG+ + +L
Sbjct: 290 KFGHRGLNQPAGLQQ--RVEITSQNHSFAIDPDSLPTAVVEVSHLNLNDRTVAGVRHKSL 347
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
+ S+QYH EASPGP D+D +F FV+ M++ + A
Sbjct: 348 PIFSVQYHPEASPGPHDADYLFEQFVQSMRTARQAA 383
>gi|402489119|ref|ZP_10835923.1| carbamoyl phosphate synthase small subunit [Rhizobium sp. CCGE 510]
gi|401812066|gb|EJT04424.1| carbamoyl phosphate synthase small subunit [Rhizobium sp. CCGE 510]
Length = 401
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE THI+L DGT GL V
Sbjct: 304 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSKSLPDGVEETHISLFDGTNCGLRVLGKQVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ +++ K
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFINMVREKK 393
>gi|222086548|ref|YP_002545082.1| carbamoyl phosphate synthase small subunit [Agrobacterium
radiobacter K84]
gi|221723996|gb|ACM27152.1| carbamoyl-phosphate synthase small chain (glutamine-hydrolysing)
protein [Agrobacterium radiobacter K84]
Length = 402
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 62/90 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +TLP+G+E TH++L DGT GL V
Sbjct: 304 GHHGANHPVKDHTTGKVEIVSMNHGFAVDASTLPEGIEETHVSLFDGTNCGLRVSGKPVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR FV L++ K
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFVNLVREKK 393
>gi|427716428|ref|YP_007064422.1| carbamoyl-phosphate synthase small subunit [Calothrix sp. PCC 7507]
gi|427348864|gb|AFY31588.1| carbamoyl-phosphate synthase small subunit [Calothrix sp. PCC 7507]
Length = 426
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/96 (50%), Positives = 68/96 (70%), Gaps = 3/96 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
KFGH G N P Q R+EI++QNH++A+DP +LP V E++H+NLND T AG+ + +L
Sbjct: 328 KFGHRGLNQPAGLQQ--RIEITSQNHSFAIDPDSLPAAVVEISHLNLNDRTVAGVRHKSL 385
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
+ S+QYH EASPGP D+D +F FV+ M++ K A
Sbjct: 386 PIFSVQYHPEASPGPHDADYLFAQFVQAMQAAKQTA 421
>gi|398381771|ref|ZP_10539877.1| carbamoyl-phosphate synthase, small subunit [Rhizobium sp. AP16]
gi|397718852|gb|EJK79433.1| carbamoyl-phosphate synthase, small subunit [Rhizobium sp. AP16]
Length = 402
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 62/90 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +TLP+G+E TH++L DGT GL V
Sbjct: 304 GHHGANHPVKDHTTGKVEIVSMNHGFAVDASTLPEGIEETHVSLFDGTNCGLRVSGKPVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR FV L++ K
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFVNLVREKK 393
>gi|383774206|ref|YP_005453273.1| carbamoyl phosphate synthase small subunit [Bradyrhizobium sp.
S23321]
gi|381362331|dbj|BAL79161.1| carbamoyl phosphate synthase small subunit [Bradyrhizobium sp.
S23321]
Length = 396
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI++ NH +AVD TLPKG THI+L DG+ G+ V
Sbjct: 305 GHHGANHPVKDETTGKVEITSMNHGFAVDENTLPKGATQTHISLFDGSNCGIQLDGKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F+ F +LM+ K
Sbjct: 365 SVQYHPEASPGPRDSHYLFQRFADLMRQKK 394
>gi|167759665|ref|ZP_02431792.1| hypothetical protein CLOSCI_02024 [Clostridium scindens ATCC 35704]
gi|167662696|gb|EDS06826.1| carbamoyl-phosphate synthase, small subunit [Clostridium scindens
ATCC 35704]
Length = 407
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/93 (48%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
K+GH GGNHPV ++ + RV IS+QNH YAVD +T+ P + IN+NDGT GL+Y
Sbjct: 315 KYGHRGGNHPVKDLSSNRVYISSQNHGYAVDASTMDPSIAKEAFINVNDGTNEGLSYEGK 374
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
N+ ++Q+H EA PGP DS +F F+++MK +
Sbjct: 375 NIFTVQFHPEACPGPQDSGYLFDRFMDMMKGAR 407
>gi|171463551|ref|YP_001797664.1| carbamoyl-phosphate synthase small subunit [Polynucleobacter
necessarius subsp. necessarius STIR1]
gi|226700915|sp|B1XUM3.1|CARA_POLNS RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|171193089|gb|ACB44050.1| carbamoyl-phosphate synthase, small subunit [Polynucleobacter
necessarius subsp. necessarius STIR1]
Length = 398
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 61/94 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ GRV I++QNH +AVD TLP + VTH++L DG+ GLA+
Sbjct: 302 KFGHHGANHPVKDLDTGRVAITSQNHGFAVDANTLPDNIRVTHVSLFDGSLQGLAWKDKP 361
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
+ Q H EASPGP D +F FVELM + +
Sbjct: 362 ELCFQGHPEASPGPHDIAYLFDRFVELMNAASKK 395
>gi|452965306|gb|EME70331.1| carbamoylphosphate synthase small subunit [Magnetospirillum sp.
SO-1]
Length = 387
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/87 (50%), Positives = 61/87 (70%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G NHPV +++ G+VEI++QNH + VD +LP G++VTH +L DG+ G+A V
Sbjct: 298 GHRGANHPVKDLETGKVEITSQNHGFVVDEKSLPAGIKVTHRSLFDGSVEGIAVEGKPVF 357
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMK 89
S+QYH EASPGP D+ +F FV LM+
Sbjct: 358 SVQYHPEASPGPQDAHYLFERFVGLME 384
>gi|225028428|ref|ZP_03717620.1| hypothetical protein EUBHAL_02702 [Eubacterium hallii DSM 3353]
gi|224954272|gb|EEG35481.1| carbamoyl-phosphate synthase, small subunit [Eubacterium hallii DSM
3353]
Length = 359
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/93 (47%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
K+GH G NHPV +++ G+V IS+QNH Y V +L + + EV+ IN+NDGT G+ Y
Sbjct: 265 KYGHRGANHPVKDLKTGKVYISSQNHGYMVMEDSLNRDIAEVSFINVNDGTLEGVHYLGK 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
NVM++Q+H EA PGP+DS+ +F +F+ +M+ K
Sbjct: 325 NVMTVQFHPEACPGPNDSEFLFEEFINMMEVAK 357
>gi|384227588|ref|YP_005619333.1| carbamoyl phosphate synthase small subunit [Buchnera aphidicola
str. Ak (Acyrthosiphon kondoi)]
gi|345538528|gb|AEO08505.1| carbamoyl phosphate synthase small subunit [Buchnera aphidicola
str. Ak (Acyrthosiphon kondoi)]
Length = 383
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/88 (50%), Positives = 61/88 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I+N RV I++QNH++ VD +P +E+TH +L DGT GL+
Sbjct: 291 KFGHHGGNHPVKDIKNNRVIITSQNHSFTVDTENMPNNIEITHTSLFDGTLQGLSLTDKL 350
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
S Q H EASPGP D+ +F +F++L+
Sbjct: 351 AFSFQGHPEASPGPHDASSLFDNFIKLI 378
>gi|299132006|ref|ZP_07025201.1| carbamoyl-phosphate synthase, small subunit [Afipia sp. 1NLS2]
gi|298592143|gb|EFI52343.1| carbamoyl-phosphate synthase, small subunit [Afipia sp. 1NLS2]
Length = 396
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 61/90 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI++ NH +AVD TLP VE TH +L D + G+A V
Sbjct: 305 GHHGANHPVMDLTTGKVEITSMNHGFAVDKTTLPSNVEQTHYSLFDNSNCGIALKDKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F FV+LM++ K
Sbjct: 365 SVQYHPEASPGPRDSHYLFTRFVDLMRAKK 394
>gi|410458061|ref|ZP_11311825.1| carbamoyl phosphate synthase small subunit [Bacillus azotoformans
LMG 9581]
gi|409931886|gb|EKN68860.1| carbamoyl phosphate synthase small subunit [Bacillus azotoformans
LMG 9581]
Length = 366
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 67/96 (69%), Gaps = 7/96 (7%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLA---Y 56
KFGH GGNHPV N++ G V+I++QNH Y VD ++ +EVTH+ LNDGT GL Y
Sbjct: 264 KFGHRGGNHPVKNVKTGAVDITSQNHGYTVDIDSIANTRLEVTHVALNDGTVEGLQHLDY 323
Query: 57 PALNVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
PA V QYH EASPGP+DS+ +F DF+ L+++ K
Sbjct: 324 PAFTV---QYHPEASPGPEDSNHLFDDFINLIETQK 356
>gi|123968442|ref|YP_001009300.1| carbamoyl phosphate synthase small subunit [Prochlorococcus marinus
str. AS9601]
gi|123198552|gb|ABM70193.1| carbamoyl-phosphate synthase small chain [Prochlorococcus marinus
str. AS9601]
Length = 379
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/88 (54%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPALN 60
FGH G NHP QN ++EI++QNH +A+DP +LPK V +TH NLND T AGL
Sbjct: 290 FGHRGLNHPCG--QNNKIEITSQNHGFAIDPNSLPKNLVRITHYNLNDNTVAGLEVNNKP 347
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
+ S+QYH EA PGP DSD +F+ FV LM
Sbjct: 348 IFSVQYHPEAGPGPHDSDYLFKKFVSLM 375
>gi|149182326|ref|ZP_01860804.1| carbamoyl-phosphate synthase small subunit [Bacillus sp. SG-1]
gi|148849945|gb|EDL64117.1| carbamoyl-phosphate synthase small subunit [Bacillus sp. SG-1]
Length = 364
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/95 (48%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV ++ G+V I++QNH Y+VD +L + +EVTHI LNDGT GL + L
Sbjct: 265 KFGHRGSNHPVKDLATGKVAITSQNHGYSVDEDSLIETRLEVTHIGLNDGTIEGLKHLDL 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
++QYH EASPGP+D++ +F F+ +M++ K +
Sbjct: 325 PAFTVQYHPEASPGPEDANGLFDQFMTMMEAEKRK 359
>gi|18311555|ref|NP_563489.1| carbamoyl phosphate synthase small subunit [Clostridium perfringens
str. 13]
gi|110799678|ref|YP_697262.1| carbamoyl phosphate synthase small subunit [Clostridium perfringens
ATCC 13124]
gi|168209814|ref|ZP_02635439.1| carbamoyl-phosphate synthase, small subunit [Clostridium
perfringens B str. ATCC 3626]
gi|168213500|ref|ZP_02639125.1| carbamoyl-phosphate synthase, small subunit [Clostridium
perfringens CPE str. F4969]
gi|168217338|ref|ZP_02642963.1| carbamoyl-phosphate synthase, small subunit [Clostridium
perfringens NCTC 8239]
gi|169343277|ref|ZP_02629922.2| carbamoyl-phosphate synthase, small subunit [Clostridium
perfringens C str. JGS1495]
gi|422875518|ref|ZP_16922003.1| carbamoyl phosphate synthase small subunit [Clostridium perfringens
F262]
gi|21759030|sp|Q8XHB2.1|CARA_CLOPE RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|18146239|dbj|BAB82279.1| carbamoyl-phosphate synthetase glutaminase subunit [Clostridium
perfringens str. 13]
gi|110674325|gb|ABG83312.1| carbamoyl-phosphate synthase, small subunit [Clostridium
perfringens ATCC 13124]
gi|169298575|gb|EDS80656.1| carbamoyl-phosphate synthase, small subunit [Clostridium
perfringens C str. JGS1495]
gi|170712119|gb|EDT24301.1| carbamoyl-phosphate synthase, small subunit [Clostridium
perfringens B str. ATCC 3626]
gi|170714989|gb|EDT27171.1| carbamoyl-phosphate synthase, small subunit [Clostridium
perfringens CPE str. F4969]
gi|182380577|gb|EDT78056.1| carbamoyl-phosphate synthase, small subunit [Clostridium
perfringens NCTC 8239]
gi|380303576|gb|EIA15878.1| carbamoyl phosphate synthase small subunit [Clostridium perfringens
F262]
Length = 349
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/86 (50%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV ++ N RV I++QNH Y V ATLP+ +E+TH+++NDGT G+ + L
Sbjct: 263 KFGHRGCNHPVKDLINNRVHITSQNHGYYV--ATLPENMEITHVSMNDGTVEGMKHKELP 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
+ S+Q+H EA PGP DS+ +F +F++
Sbjct: 321 IFSVQFHPEACPGPKDSEYIFDEFMK 346
>gi|359408697|ref|ZP_09201165.1| carbamoyl-phosphate synthase, small subunit [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356675450|gb|EHI47803.1| carbamoyl-phosphate synthase, small subunit [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 401
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 62/90 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G NHPV ++ GR+EI++QNH + V+P +LP VEV+HI+L DG+ GL + V
Sbjct: 308 GHRGANHPVRDLATGRIEITSQNHGFRVEPDSLPDEVEVSHISLFDGSVEGLRHKQKPVF 367
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+QYH E+SPGP DS +F F ELM++ K
Sbjct: 368 CVQYHPESSPGPHDSRYLFTRFAELMRTHK 397
>gi|222149287|ref|YP_002550244.1| carbamoyl phosphate synthase small subunit [Agrobacterium vitis S4]
gi|221736271|gb|ACM37234.1| carbamoyl phosphate synthetase small chain [Agrobacterium vitis S4]
Length = 406
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+GVE THI+L D T GL V
Sbjct: 309 GHHGANHPVKDFTTGKVEIVSMNHGFAVDSKSLPEGVEETHISLFDNTNCGLRLTGKPVF 368
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ +++ K
Sbjct: 369 SVQHHPEASPGPQDSHYLFRRFINMVREKK 398
>gi|445061974|ref|ZP_21374432.1| carbamoyl phosphate synthase small subunit [Brachyspira hampsonii
30599]
gi|444506647|gb|ELV06951.1| carbamoyl phosphate synthase small subunit [Brachyspira hampsonii
30599]
Length = 361
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV +++ G+V I++QNH+YAV +L + +THI+LNDG+C G+ +
Sbjct: 264 KFGHRGGNHPVKDLETGKVSITSQNHSYAVKAESLSNTDLVMTHISLNDGSCEGVKHKRY 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
V S+QYH E+SPGP+DS +F +F+E++
Sbjct: 324 PVFSVQYHPESSPGPEDSKYLFDNFIEMI 352
>gi|365889078|ref|ZP_09427796.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Bradyrhizobium sp. STM 3809]
gi|365335144|emb|CCE00327.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Bradyrhizobium sp. STM 3809]
Length = 398
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/93 (51%), Positives = 60/93 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI++ NH +AVD TLP G THI+L DG+ G+ V
Sbjct: 305 GHHGANHPVKDETTGKVEITSMNHGFAVDQDTLPAGATQTHISLFDGSNCGIQLEGKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EASPGP DS +F+ F ELM+ K A
Sbjct: 365 SVQYHPEASPGPRDSHYLFQRFAELMREKKRSA 397
>gi|427709003|ref|YP_007051380.1| carbamoyl-phosphate synthase small subunit [Nostoc sp. PCC 7107]
gi|427361508|gb|AFY44230.1| carbamoyl-phosphate synthase small subunit [Nostoc sp. PCC 7107]
Length = 388
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 67/92 (72%), Gaps = 3/92 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
KFGH G N P R+EI++QNH++A++P TLP+ V E++H+NLND T AG+ + +L
Sbjct: 290 KFGHRGLNQPAG--LERRIEITSQNHSFAINPDTLPQAVVEISHLNLNDRTVAGVRHKSL 347
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSV 91
+ S+QYH EASPGP D+D +F FV+ M+S+
Sbjct: 348 PIFSVQYHPEASPGPHDADYLFEQFVQAMRSL 379
>gi|377577111|ref|ZP_09806094.1| carbamoyl-phosphate synthase small chain [Escherichia hermannii
NBRC 105704]
gi|377541639|dbj|GAB51259.1| carbamoyl-phosphate synthase small chain [Escherichia hermannii
NBRC 105704]
Length = 382
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 62/95 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV NI+N V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKNIENNTVLITAQNHGFAVDEATLPATLRVTHKSLFDGTLQGIHRTDKA 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKNA 381
>gi|355625964|ref|ZP_09048495.1| carbamoyl-phosphate synthase, small subunit [Clostridium sp.
7_3_54FAA]
gi|354821097|gb|EHF05494.1| carbamoyl-phosphate synthase, small subunit [Clostridium sp.
7_3_54FAA]
Length = 394
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/95 (44%), Positives = 62/95 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K+GH G N PV +++ GR+ IS+QNH Y V +LP G E T IN+NDGTC G+ Y +
Sbjct: 297 KYGHRGANQPVKDLETGRIYISSQNHGYEVLRESLPAGAEETFINVNDGTCEGITYRDIP 356
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
++Q+H EA GP D++ +F F+++M+ K A
Sbjct: 357 AFTVQFHPEACAGPKDTEELFGRFIKMMEKYKEEA 391
>gi|334117978|ref|ZP_08492068.1| carbamoyl-phosphate synthase, small subunit [Microcoleus vaginatus
FGP-2]
gi|333459963|gb|EGK88573.1| carbamoyl-phosphate synthase, small subunit [Microcoleus vaginatus
FGP-2]
Length = 385
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHP Q +VEI++QNH +A++P +L VE+TH+NLND T AGL + L
Sbjct: 290 KFGHRGLNHPAGLTQ--QVEITSQNHGFAINPDSLVPEVEITHLNLNDRTVAGLKHKTLP 347
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+QYH EASPGP D+D +F FV+ M+
Sbjct: 348 LFSVQYHPEASPGPHDADYLFDRFVQSMR 376
>gi|146338422|ref|YP_001203470.1| carbamoyl phosphate synthase small subunit [Bradyrhizobium sp. ORS
278]
gi|146191228|emb|CAL75233.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Bradyrhizobium sp. ORS 278]
Length = 398
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/93 (51%), Positives = 60/93 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI++ NH +AVD TLP G THI+L DG+ G+ V
Sbjct: 305 GHHGANHPVKDETTGKVEITSMNHGFAVDQDTLPAGATQTHISLFDGSNCGIQLEGKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EASPGP DS +F+ F ELM+ K A
Sbjct: 365 SVQYHPEASPGPRDSHYLFQRFAELMREKKRSA 397
>gi|95929150|ref|ZP_01311894.1| carbamoyl-phosphate synthase, small subunit [Desulfuromonas
acetoxidans DSM 684]
gi|95134648|gb|EAT16303.1| carbamoyl-phosphate synthase, small subunit [Desulfuromonas
acetoxidans DSM 684]
Length = 376
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 60/92 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGN PV +N RVEI++QNH +AVD +L ++H+NLND T GL + L
Sbjct: 281 KFGHRGGNQPVQRDENKRVEITSQNHGFAVDAQSLESASAISHLNLNDNTVEGLCHSQLP 340
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+ +F F+ LM+ K
Sbjct: 341 AFSVQYHPEASPGPHDAHYLFDRFISLMEDFK 372
>gi|337266945|ref|YP_004611000.1| carbamoyl-phosphate synthase, small subunit [Mesorhizobium
opportunistum WSM2075]
gi|336027255|gb|AEH86906.1| carbamoyl-phosphate synthase, small subunit [Mesorhizobium
opportunistum WSM2075]
Length = 401
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/87 (52%), Positives = 60/87 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE TH++L DG+ G+A V
Sbjct: 303 GHHGANHPVKDHTTGKVEIVSMNHGFAVDADSLPAGVEETHVSLFDGSNCGIALTGRPVF 362
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMK 89
S+Q+H EASPGP DS +FR FV L++
Sbjct: 363 SVQHHPEASPGPQDSHYLFRRFVNLIR 389
>gi|347758342|ref|YP_004865904.1| carbamoyl-phosphate synthase small subunit [Micavibrio
aeruginosavorus ARL-13]
gi|347590860|gb|AEP09902.1| carbamoyl-phosphate synthase, small subunit [Micavibrio
aeruginosavorus ARL-13]
Length = 401
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
+ GH G NHPV ++ G+VEI++QNH + + P TLP+ EVTH++L DG+ GL
Sbjct: 298 ELGHRGANHPVKDLTTGKVEITSQNHGFRILPDTLPQDAEVTHVSLFDGSNEGLRLKGKP 357
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S+QYH EASPGP DS +F+ FV++MK
Sbjct: 358 VFSVQYHPEASPGPRDSHYLFQRFVDMMK 386
>gi|152991772|ref|YP_001357493.1| carbamoyl phosphate synthase small subunit [Sulfurovum sp. NBC37-1]
gi|151423633|dbj|BAF71136.1| carbamoylphosphate synthase, small subunit [Sulfurovum sp. NBC37-1]
Length = 372
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/88 (54%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N + G VEI+AQNHNY V P + + EVTH+NL D T GL Y
Sbjct: 286 KFGHHGGNHPVKNERTGAVEITAQNHNYNV-PDNITEVAEVTHVNLFDNTIEGLRYNDSP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
MS+Q+H EASPGP +S +F +F +++
Sbjct: 345 TMSVQHHPEASPGPHESAYIFGEFAKML 372
>gi|421591221|ref|ZP_16036114.1| carbamoyl phosphate synthase small subunit [Rhizobium sp. Pop5]
gi|403703360|gb|EJZ19629.1| carbamoyl phosphate synthase small subunit [Rhizobium sp. Pop5]
Length = 401
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/90 (53%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE THI+L DGT GL V
Sbjct: 304 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSKSLPDGVEETHISLFDGTNCGLRVLGKLVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR FV +++ K
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFVNMVREKK 393
>gi|399036885|ref|ZP_10733849.1| carbamoyl-phosphate synthase, small subunit [Rhizobium sp. CF122]
gi|398065712|gb|EJL57333.1| carbamoyl-phosphate synthase, small subunit [Rhizobium sp. CF122]
Length = 403
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 61/90 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP G+E TH++L DGT GL +
Sbjct: 306 GHHGANHPVKDHTTGKVEIVSMNHGFAVDTKSLPHGIEETHVSLFDGTNCGLRVAGKPIF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ L+++ K
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINLVRAKK 395
>gi|433773667|ref|YP_007304134.1| carbamoyl-phosphate synthase, small subunit [Mesorhizobium
australicum WSM2073]
gi|433665682|gb|AGB44758.1| carbamoyl-phosphate synthase, small subunit [Mesorhizobium
australicum WSM2073]
Length = 401
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/87 (52%), Positives = 60/87 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE TH++L DG+ G+A V
Sbjct: 303 GHHGANHPVKDHTTGKVEIVSMNHGFAVDADSLPAGVEETHVSLFDGSNCGIALTGRPVF 362
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMK 89
S+Q+H EASPGP DS +FR FV L++
Sbjct: 363 SVQHHPEASPGPQDSHYLFRRFVNLIR 389
>gi|357037571|ref|ZP_09099371.1| carbamoyl-phosphate synthase, small subunit [Desulfotomaculum
gibsoniae DSM 7213]
gi|355361736|gb|EHG09491.1| carbamoyl-phosphate synthase, small subunit [Desulfotomaculum
gibsoniae DSM 7213]
Length = 359
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG--VEVTHINLNDGTCAGLAYPA 58
KFGH G NHPV +++ GRV I++ NH ++VD +L KG +++THINLND T G+ +
Sbjct: 266 KFGHRGANHPVKDLRTGRVYITSHNHGFSVDEESL-KGMDIDITHINLNDNTVEGIRHKY 324
Query: 59 LNVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
L + ++QYH EASPGP +SD +F F+++M+
Sbjct: 325 LPLFAVQYHPEASPGPQESDYIFDQFMDMMR 355
>gi|194334905|ref|YP_002016765.1| carbamoyl phosphate synthase small subunit [Prosthecochloris
aestuarii DSM 271]
gi|226700917|sp|B4S5S1.1|CARA_PROA2 RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|194312723|gb|ACF47118.1| carbamoyl-phosphate synthase, small subunit [Prosthecochloris
aestuarii DSM 271]
Length = 371
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 62/92 (67%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N+++ +EI++QNH +AV +LP+ +E+TH+NL D T G+ + L
Sbjct: 277 KFGHHGSNHPVKNLKSSSIEITSQNHGFAVAMESLPESLEMTHLNLYDQTVEGVRHKKLP 336
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EA+PGP DS +F F +M K
Sbjct: 337 CFSVQYHPEAAPGPHDSHYLFEQFTAMMDQAK 368
>gi|330837671|ref|YP_004412312.1| carbamoyl-phosphate synthase small subunit [Sphaerochaeta coccoides
DSM 17374]
gi|329749574|gb|AEC02930.1| carbamoyl-phosphate synthase, small subunit [Sphaerochaeta
coccoides DSM 17374]
Length = 406
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/94 (47%), Positives = 61/94 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGN PV ++GRV ++ QNH Y VD +LP+ +T++N NDGT GL
Sbjct: 290 KFGHHGGNQPVRETESGRVMVTCQNHGYQVDAESLPESTVITYVNANDGTVEGLKDEQKG 349
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
V+S+Q+H EASPGP D+ +F DF+ + K R
Sbjct: 350 VISVQFHPEASPGPWDARRLFDDFIAFAHAWKTR 383
>gi|332296905|ref|YP_004438827.1| carbamoyl-phosphate synthase small subunit [Treponema brennaborense
DSM 12168]
gi|332180008|gb|AEE15696.1| carbamoyl-phosphate synthase, small subunit [Treponema
brennaborense DSM 12168]
Length = 425
Score = 99.0 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/95 (47%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K+GH G N PV + +GRV IS+QNH YAV +LP G E++ IN NDGTC G++Y
Sbjct: 329 KYGHRGANQPVKEVSSGRVYISSQNHGYAVVSDSLPAGAELSFINTNDGTCEGVSYTDFP 388
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EAS GP D+ +F F+ L+ +RA
Sbjct: 389 GFSVQFHPEASGGPLDTGFLFDRFIALIADTGFRA 423
>gi|302385685|ref|YP_003821507.1| carbamoyl-phosphate synthase small subunit [Clostridium
saccharolyticum WM1]
gi|302196313|gb|ADL03884.1| carbamoyl-phosphate synthase, small subunit [Clostridium
saccharolyticum WM1]
Length = 357
Score = 99.0 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEV-THINLNDGTCAGLAYPAL 59
K+GH GGNHPV +++ GRV IS+QNH Y VD T+ V V +N+NDGT GL Y
Sbjct: 265 KYGHRGGNHPVKDLETGRVYISSQNHGYVVDVETMDPSVAVPAFVNVNDGTNEGLKYTGK 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
N+ ++QYH EA PGP DS +F F+++M+
Sbjct: 325 NIFTVQYHPEACPGPKDSGYLFDRFIKMME 354
>gi|182624311|ref|ZP_02952096.1| carbamoyl-phosphate synthase, small subunit [Clostridium
perfringens D str. JGS1721]
gi|422347638|ref|ZP_16428549.1| carbamoyl-phosphate synthase small chain [Clostridium perfringens
WAL-14572]
gi|177910529|gb|EDT72902.1| carbamoyl-phosphate synthase, small subunit [Clostridium
perfringens D str. JGS1721]
gi|373223908|gb|EHP46252.1| carbamoyl-phosphate synthase small chain [Clostridium perfringens
WAL-14572]
Length = 349
Score = 99.0 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 43/86 (50%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV ++ N RV I++QNH Y V ATLP+ +E+TH+++NDGT G+ + L
Sbjct: 263 KFGHRGCNHPVKDLINNRVHITSQNHGYYV--ATLPENMEITHVSMNDGTVEGMKHKELP 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
+ S+Q+H EA PGP DS+ +F +F++
Sbjct: 321 IFSVQFHPEACPGPKDSEYIFDEFMK 346
>gi|110801817|ref|YP_699824.1| carbamoyl phosphate synthase small subunit [Clostridium perfringens
SM101]
gi|110682318|gb|ABG85688.1| carbamoyl-phosphate synthase, small subunit [Clostridium
perfringens SM101]
Length = 349
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 43/86 (50%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV ++ N RV I++QNH Y V ATLP+ +E+TH+++NDGT G+ + L
Sbjct: 263 KFGHRGCNHPVKDLINNRVHITSQNHGYYV--ATLPENMEITHVSMNDGTVEGMKHKELP 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
+ S+Q+H EA PGP DS+ +F +F++
Sbjct: 321 IFSVQFHPEACPGPKDSEYIFDEFMK 346
>gi|354593485|ref|ZP_09011528.1| carbamoyl-phosphate synthase small chain [Commensalibacter
intestini A911]
gi|353672596|gb|EHD14292.1| carbamoyl-phosphate synthase small chain [Commensalibacter
intestini A911]
Length = 457
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/86 (52%), Positives = 58/86 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G N PV +++ G+VEI++QNH +AVDP +LP THINL DG+ G+A
Sbjct: 363 GHRGANQPVKDLKTGKVEITSQNHGFAVDPNSLPSDAHATHINLFDGSNEGIASDKYPAF 422
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EASPGP DS +F+ F ELM
Sbjct: 423 SVQYHPEASPGPTDSHYLFQRFAELM 448
>gi|254413787|ref|ZP_05027556.1| carbamoyl-phosphate synthase, small subunit [Coleofasciculus
chthonoplastes PCC 7420]
gi|196179384|gb|EDX74379.1| carbamoyl-phosphate synthase, small subunit [Coleofasciculus
chthonoplastes PCC 7420]
Length = 382
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 50/92 (54%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHP Q RVEI++QNH +A++ +L VE+TH+NLND T AGL + L
Sbjct: 290 KFGHRGLNHPAGLKQ--RVEITSQNHGFAINSESLGADVEITHLNLNDRTVAGLRHKTLP 347
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+D +F FVE M+S K
Sbjct: 348 FFSVQYHPEASPGPHDADYLFDQFVESMRSHK 379
>gi|167629521|ref|YP_001680020.1| carbamoyl-phosphate synthase small subunit [Heliobacterium
modesticaldum Ice1]
gi|167592261|gb|ABZ84009.1| carbamoyl-phosphate synthase, small subunit [Heliobacterium
modesticaldum Ice1]
Length = 439
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 62/89 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ GRV I++QNH YA+D TLPKG V+H N ND T GL + L
Sbjct: 343 KFGHRGANHPVKDLRTGRVFITSQNHGYAIDENTLPKGFTVSHRNGNDDTVEGLRHQHLP 402
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+QYH EA+PGP DS +F +F+ M+
Sbjct: 403 LYSVQYHPEAAPGPHDSAFLFDEFIANMQ 431
>gi|418324553|ref|ZP_12935787.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
pettenkoferi VCU012]
gi|365225240|gb|EHM66485.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
pettenkoferi VCU012]
Length = 366
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/95 (46%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G+V +++QNH Y++D +L +EVTHI +ND T GL + L
Sbjct: 266 KFGHRGANHPVKDLKTGKVALTSQNHGYSIDKDSLENTDLEVTHIAINDNTVEGLRHKTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EASPGP DS+ +F +F+++M K +
Sbjct: 326 PAFSVQYHPEASPGPTDSNYLFDEFIDMMNQFKEK 360
>gi|288957895|ref|YP_003448236.1| carbamoyl-phosphate synthase small chain [Azospirillum sp. B510]
gi|288910203|dbj|BAI71692.1| carbamoyl-phosphate synthase small chain [Azospirillum sp. B510]
Length = 390
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G NHPV ++ +GRVEI++QNH + V P TLP EVTH++L DGT G+ V
Sbjct: 299 GHRGANHPVKDLVSGRVEITSQNHGFVVVPETLPADAEVTHVSLFDGTNEGIRLKGKPVF 358
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F FV+L+ K
Sbjct: 359 SVQYHPEASPGPQDSHYLFDRFVQLIAEKK 388
>gi|86751249|ref|YP_487745.1| carbamoyl phosphate synthase small subunit [Rhodopseudomonas
palustris HaA2]
gi|86574277|gb|ABD08834.1| carbamoyl-phosphate synthase small subunit [Rhodopseudomonas
palustris HaA2]
Length = 397
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 63/93 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI++ NH +AVD TLP V+ TH++L D + G+A V
Sbjct: 305 GHHGANHPVKDLTTGKVEITSMNHGFAVDKTTLPANVQQTHVSLFDDSNCGIALSDRPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EASPGP DS +FR F +LM++ K A
Sbjct: 365 SVQYHPEASPGPRDSHYLFRRFSDLMRAKKSAA 397
>gi|27904638|ref|NP_777764.1| carbamoyl phosphate synthase small subunit [Buchnera aphidicola
str. Bp (Baizongia pistaciae)]
gi|29839274|sp|P59576.1|CARA_BUCBP RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|27904035|gb|AAO26869.1| carbamoyl-phosphate synthase small chain [Buchnera aphidicola str.
Bp (Baizongia pistaciae)]
Length = 397
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 46/89 (51%), Positives = 59/89 (66%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV +++ V I++QNHNY VD LPK + +THI+L DG+ GL +
Sbjct: 298 KFGHHGSNHPVKELKSNTVMITSQNHNYTVDTNNLPKNINITHISLFDGSIQGLQRNDKH 357
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
S Q H EASPGP DS +F F++LMK
Sbjct: 358 AFSFQGHPEASPGPHDSMILFDKFIKLMK 386
>gi|6552725|gb|AAF16525.1|AF191301_1 carbamoyl-phosphate synthase subunit A [Medicago sativa]
Length = 403
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/92 (48%), Positives = 61/92 (66%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N+ RV I+AQNH +AV+ ++LP + TH +L DG+ G+
Sbjct: 311 KFGHHGGNHPVQNLDTKRVLITAQNHGFAVEESSLPANLRATHKSLFDGSLQGIHRTDKP 370
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP ++D +F F+ELM++ K
Sbjct: 371 AFSFQGHPEASPGPHEADTLFDHFIELMQARK 402
>gi|323691568|ref|ZP_08105832.1| carbamoyl-phosphate synthase [Clostridium symbiosum WAL-14673]
gi|323504361|gb|EGB20159.1| carbamoyl-phosphate synthase [Clostridium symbiosum WAL-14673]
Length = 368
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 42/95 (44%), Positives = 62/95 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K+GH G N PV +++ GR+ IS+QNH Y V +LP G E T IN+NDGTC G+ Y +
Sbjct: 271 KYGHRGANQPVKDLETGRIYISSQNHGYEVLRESLPAGAEETFINVNDGTCEGITYRDIP 330
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
++Q+H EA GP D++ +F F+++M+ K A
Sbjct: 331 AFTVQFHPEACAGPKDTEELFGRFIKMMEKYKEEA 365
>gi|323482997|ref|ZP_08088393.1| carbamoyl-phosphate synthase [Clostridium symbiosum WAL-14163]
gi|323403703|gb|EGA96005.1| carbamoyl-phosphate synthase [Clostridium symbiosum WAL-14163]
Length = 368
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 42/95 (44%), Positives = 62/95 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K+GH G N PV +++ GR+ IS+QNH Y V +LP G E T IN+NDGTC G+ Y +
Sbjct: 271 KYGHRGANQPVKDLETGRIYISSQNHGYEVLRESLPAGAEETFINVNDGTCEGITYRDIP 330
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
++Q+H EA GP D++ +F F+++M+ K A
Sbjct: 331 AFTVQFHPEACAGPKDTEELFGRFIKMMEKYKEEA 365
>gi|315918454|ref|ZP_07914694.1| carbamyl phosphate synthetase [Fusobacterium gonidiaformans ATCC
25563]
gi|313692329|gb|EFS29164.1| carbamyl phosphate synthetase [Fusobacterium gonidiaformans ATCC
25563]
Length = 357
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 42/92 (45%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGNHPV ++ + R+ I++QNH YA+D +P+ V+H+++NDGT GL L+
Sbjct: 264 KFGHRGGNHPVKDLDHNRIYITSQNHGYAID--KIPEIARVSHVSVNDGTVEGLKCDFLH 321
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+M++Q+H EA PGP D + +F +F+E++K K
Sbjct: 322 IMTVQFHPEAWPGPTDCEYLFDEFLEVIKGAK 353
>gi|147678145|ref|YP_001212360.1| carbamoylphosphate synthase small subunit [Pelotomaculum
thermopropionicum SI]
gi|146274242|dbj|BAF59991.1| carbamoylphosphate synthase small subunit [Pelotomaculum
thermopropionicum SI]
Length = 359
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVE--VTHINLNDGTCAGLAYPA 58
KFGH G NHPV +++ GRV IS+ NH ++VD +L KG++ V+H NLNDGT G+ +
Sbjct: 266 KFGHRGANHPVKDLETGRVYISSHNHGFSVDEESL-KGLDIYVSHRNLNDGTVEGIKHKF 324
Query: 59 LNVMSLQYHLEASPGPDDSDCVFRDFVELM 88
L V S+QYH EASPGP DS+ +F F+E+M
Sbjct: 325 LPVFSVQYHPEASPGPKDSEYIFDQFIEMM 354
>gi|398828943|ref|ZP_10587143.1| carbamoyl-phosphate synthase, small subunit [Phyllobacterium sp.
YR531]
gi|398217801|gb|EJN04318.1| carbamoyl-phosphate synthase, small subunit [Phyllobacterium sp.
YR531]
Length = 413
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD A+ P+GVE TH++L DG+ GL V
Sbjct: 312 GHHGANHPVRDDTTGKVEIVSMNHGFAVDAASFPEGVEETHVSLFDGSNCGLRVTGRPVF 371
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F L++ K
Sbjct: 372 SVQHHPEASPGPQDSHYLFRRFFNLIRQKK 401
>gi|354564970|ref|ZP_08984146.1| carbamoyl-phosphate synthase, small subunit [Fischerella sp.
JSC-11]
gi|353550096|gb|EHC19535.1| carbamoyl-phosphate synthase, small subunit [Fischerella sp.
JSC-11]
Length = 392
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/93 (50%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
KFGH G N P RVEI++QNH++A++P TLP+ V E++H+NLND T AG+ + L
Sbjct: 290 KFGHRGLNQPAG--LEKRVEITSQNHSFAINPDTLPEAVVEISHLNLNDRTIAGVRHKNL 347
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+QYH EASPGP D+D +F +FV+ M++ +
Sbjct: 348 PVFSVQYHPEASPGPHDADYLFENFVQAMRAAR 380
>gi|302391677|ref|YP_003827497.1| carbamoyl-phosphate synthase small subunit [Acetohalobium
arabaticum DSM 5501]
gi|302203754|gb|ADL12432.1| carbamoyl-phosphate synthase small subunit [Acetohalobium
arabaticum DSM 5501]
Length = 360
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 46/91 (50%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ RV I++QNH +AV+ +L VE+TH NLND T G+ +
Sbjct: 267 KFGHRGANHPVQDLRTKRVYITSQNHGFAVEAESLDSAEVEITHRNLNDDTVEGMKHRKY 326
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
V S+QYH EASPGP+DS +F +F+EL+ S
Sbjct: 327 PVFSVQYHPEASPGPEDSHYLFTEFIELIAS 357
>gi|303249382|ref|ZP_07335608.1| carbamoyl-phosphate synthase, small subunit [Desulfovibrio
fructosovorans JJ]
gi|302489220|gb|EFL49185.1| carbamoyl-phosphate synthase, small subunit [Desulfovibrio
fructosovorans JJ]
Length = 375
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV +++ GR+EIS+QNH + VD +L VE+TH+NLNDGT G A+
Sbjct: 283 KFGHHGLNHPVKDLETGRIEISSQNHGFCVDIESL-SNVELTHVNLNDGTLEGFAHKKKP 341
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V+++QYH EA+PGP DS F F L++
Sbjct: 342 VIAIQYHPEAAPGPHDSRYFFTRFRNLVR 370
>gi|187779559|ref|ZP_02996032.1| hypothetical protein CLOSPO_03155 [Clostridium sporogenes ATCC
15579]
gi|187773184|gb|EDU36986.1| carbamoyl-phosphate synthase, small subunit [Clostridium sporogenes
ATCC 15579]
Length = 349
Score = 98.6 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 43/86 (50%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ +V I++QNH Y V+ LPK +EVTHI++NDGT G+ + L+
Sbjct: 263 KFGHRGCNHPVKDLEENKVHITSQNHGYFVN--VLPKDMEVTHISVNDGTIEGMKHKNLS 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
+ S+Q+H EA PGP DSD +F +F++
Sbjct: 321 IFSVQFHPEACPGPKDSDYIFDEFMK 346
>gi|119511319|ref|ZP_01630433.1| carbamoyl-phosphate synthase small subunit [Nodularia spumigena
CCY9414]
gi|119464025|gb|EAW44948.1| carbamoyl-phosphate synthase small subunit [Nodularia spumigena
CCY9414]
Length = 380
Score = 98.6 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 47/91 (51%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G N P Q ++EI++QNH++A+DP +LP + VEV+H+NLND T AGL + +L
Sbjct: 290 KFGHRGLNQPAGLQQ--KIEITSQNHSFAIDPDSLPAEVVEVSHLNLNDRTVAGLRHKSL 347
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
+ S+QYH EASPGP D+D +F FV+ M++
Sbjct: 348 PIFSVQYHPEASPGPHDADYLFEQFVQAMRT 378
>gi|358068811|ref|ZP_09155259.1| carbamoyl-phosphate synthase [Johnsonella ignava ATCC 51276]
gi|356692991|gb|EHI54684.1| carbamoyl-phosphate synthase [Johnsonella ignava ATCC 51276]
Length = 359
Score = 98.6 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
K+GH GGNHPV + + GR I++QNH YAVD +L K V + N+NDGT GL Y
Sbjct: 267 KYGHRGGNHPVKDHETGRTYITSQNHGYAVDEKSLDKSVAQAAFTNVNDGTNEGLRYIGK 326
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
N+ ++QYH EA PGP DSD +F F+++M+
Sbjct: 327 NIFTVQYHPEACPGPHDSDYLFDKFIKMME 356
>gi|357385141|ref|YP_004899865.1| carbamoyl-phosphate synthase small subunit [Pelagibacterium
halotolerans B2]
gi|351593778|gb|AEQ52115.1| carbamoyl-phosphate synthase small chain [Pelagibacterium
halotolerans B2]
Length = 395
Score = 98.6 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 62/90 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI++ NH +AVD +LP GV TH +L DG+ AGLA +
Sbjct: 299 GHHGANHPVKDLTTGKVEITSMNHGFAVDRDSLPAGVVETHTSLFDGSNAGLAVEGKPIF 358
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+ +F+ F+ L++ K
Sbjct: 359 SVQYHPEASPGPHDAHYLFKRFINLVREQK 388
>gi|326790914|ref|YP_004308735.1| carbamoyl-phosphate synthase small subunit [Clostridium lentocellum
DSM 5427]
gi|326541678|gb|ADZ83537.1| carbamoyl-phosphate synthase, small subunit [Clostridium
lentocellum DSM 5427]
Length = 355
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV + RV I++QNHNY V+ TLP+G VTH N+ND T G+ + LN
Sbjct: 263 KFGHHGCNHPVKDFITNRVYITSQNHNYYVE--TLPEGAVVTHTNMNDRTVEGMYFKDLN 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
+ S+Q+H EA PGP D+ +F +F+ +M+ K A
Sbjct: 321 IYSVQFHPEACPGPTDTAHIFDEFITVMQGGKLNA 355
>gi|425736777|ref|ZP_18855053.1| carbamoyl phosphate synthase small subunit [Staphylococcus
massiliensis S46]
gi|425483249|gb|EKU50401.1| carbamoyl phosphate synthase small subunit [Staphylococcus
massiliensis S46]
Length = 366
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV ++ G++ +++QNH YA+D +L +++TH+ LNDGT GL + +L
Sbjct: 266 KFGHRGANHPVKDLATGKIALTSQNHGYAIDKDSLKDTDLKITHVALNDGTVEGLKHTSL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F DF+++M K +
Sbjct: 326 PAFSVQYHPEACPGPTDSNPLFDDFIQMMNEFKEK 360
>gi|319892194|ref|YP_004149069.1| carbamoyl-phosphate synthase small subunit [Staphylococcus
pseudintermedius HKU10-03]
gi|386319534|ref|YP_006015697.1| carbamoyl-phosphate synthase small subunit [Staphylococcus
pseudintermedius ED99]
gi|317161890|gb|ADV05433.1| Carbamoyl-phosphate synthase small chain [Staphylococcus
pseudintermedius HKU10-03]
gi|323464705|gb|ADX76858.1| carbamoyl-phosphate synthase, small subunit [Staphylococcus
pseudintermedius ED99]
Length = 366
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV ++ G++ +++QNH YA+D ++ +E+THI LNDGT GL + L
Sbjct: 266 KFGHRGANHPVKDLATGKIALTSQNHGYAIDADSVAATDLEITHIALNDGTVEGLKHRTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F FVE+M+ K +
Sbjct: 326 PAFSVQYHPEACPGPTDSNYLFDQFVEMMQQNKQK 360
>gi|91978447|ref|YP_571106.1| carbamoyl phosphate synthase small subunit [Rhodopseudomonas
palustris BisB5]
gi|91684903|gb|ABE41205.1| carbamoyl-phosphate synthase small subunit [Rhodopseudomonas
palustris BisB5]
Length = 397
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 63/93 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI++ NH +AVD +TLP V THI+L D + G+A V
Sbjct: 305 GHHGANHPVKDLTTGKVEITSMNHGFAVDKSTLPDNVTQTHISLFDDSNCGIALADKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EASPGP DS +FR F +LM++ K A
Sbjct: 365 SVQYHPEASPGPQDSHYLFRRFSDLMRANKSAA 397
>gi|325109215|ref|YP_004270283.1| carbamoyl-phosphate synthase small subunit [Planctomyces
brasiliensis DSM 5305]
gi|324969483|gb|ADY60261.1| carbamoyl-phosphate synthase small subunit [Planctomyces
brasiliensis DSM 5305]
Length = 386
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV N + G+VE+++QNH +A+DP +L VEVTH NLND T AG+ + L
Sbjct: 289 KFGHRGANQPVMNQKTGKVEVTSQNHGFALDPDSLGDEVEVTHWNLNDQTVAGIRHKTLA 348
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+QYH EAS GP DS +F DF+++++
Sbjct: 349 AFGVQYHPEASAGPHDSRYLFDDFLDMVQ 377
>gi|352082140|ref|ZP_08952963.1| carbamoyl-phosphate synthase, small subunit [Rhodanobacter sp.
2APBS1]
gi|351682278|gb|EHA65384.1| carbamoyl-phosphate synthase, small subunit [Rhodanobacter sp.
2APBS1]
Length = 378
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 59/95 (62%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ +GRV I++QNH +AVDP TLP V VTH +L DG+ G A
Sbjct: 284 KFGHHGANHPVKDLDDGRVLITSQNHGFAVDPTTLPANVRVTHTSLFDGSLQGFALTDRP 343
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
Q H EASPGP D +F+ F LM+ + A
Sbjct: 344 AFCFQGHPEASPGPLDIGYLFKRFAALMQEARTHA 378
>gi|384209735|ref|YP_005595455.1| carbamoyl phosphate synthase small subunit [Brachyspira intermedia
PWS/A]
gi|343387385|gb|AEM22875.1| carbamoyl phosphate synthase small subunit [Brachyspira intermedia
PWS/A]
Length = 361
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV +++ GR+ I++QNH+YAV +L + +THI+LNDG+C G+ +
Sbjct: 264 KFGHRGGNHPVKDLETGRISITSQNHSYAVKKESLSNTDLIMTHISLNDGSCEGVKHKKY 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
V S+QYH E++PGP+DS +F +F++++ +
Sbjct: 324 PVFSVQYHPESNPGPEDSKYLFDNFIDMINN 354
>gi|226324795|ref|ZP_03800313.1| hypothetical protein COPCOM_02582 [Coprococcus comes ATCC 27758]
gi|225207243|gb|EEG89597.1| carbamoyl-phosphate synthase, small subunit [Coprococcus comes ATCC
27758]
Length = 356
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEV-THINLNDGTCAGLAYPAL 59
K+GH GGNHPV ++Q GRV IS+QNH YAVD ++P+ V V +N+ND T G++Y
Sbjct: 264 KYGHRGGNHPVKDLQTGRVYISSQNHGYAVDADSIPESVAVPAFVNVNDNTNEGMSYVGK 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
N+ ++Q+H EA PGP DS +F F+++M K
Sbjct: 324 NIFTVQFHPEACPGPQDSGYLFDRFMDMMGGTK 356
>gi|405381968|ref|ZP_11035790.1| carbamoyl-phosphate synthase, small subunit [Rhizobium sp. CF142]
gi|397321456|gb|EJJ25872.1| carbamoyl-phosphate synthase, small subunit [Rhizobium sp. CF142]
Length = 418
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 63/93 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+GVE TH++L DGT GL +V
Sbjct: 321 GHHGANHPVKDHTTGKVEIVSMNHGFAVDTKSLPEGVEETHVSLFDGTNCGLRVLGKSVF 380
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR FV +++ K A
Sbjct: 381 SVQHHPEASPGPQDSHYLFRRFVNMVREKKGEA 413
>gi|304391332|ref|ZP_07373276.1| carbamoyl-phosphate synthase, small subunit [Ahrensia sp. R2A130]
gi|303296688|gb|EFL91044.1| carbamoyl-phosphate synthase, small subunit [Ahrensia sp. R2A130]
Length = 400
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 49/93 (52%), Positives = 60/93 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE THI+L DGT GL V
Sbjct: 302 GHHGANHPVKDHTTGKVEIVSMNHGFAVDGESLPAGVEETHISLFDGTNCGLRVTGKPVF 361
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
+Q+H EASPGP DS +FR FV L++ K A
Sbjct: 362 GVQHHPEASPGPQDSHYLFRRFVNLIRQTKGEA 394
>gi|384440402|ref|YP_005655126.1| carbamoyl-phosphate synthase small chain [Thermus sp. CCB_US3_UF1]
gi|359291535|gb|AEV17052.1| Carbamoyl-phosphate synthase small chain [Thermus sp. CCB_US3_UF1]
Length = 388
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV N+ G++EI++QNH YAVD +L + THINLNDGT G+A+
Sbjct: 281 KFGHRGANHPVKNLLTGKIEITSQNHGYAVDIDSL-REFRPTHINLNDGTLEGMAHARYP 339
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
V S+QYH EA+PGP D+ +FR F+E +++
Sbjct: 340 VFSVQYHPEAAPGPHDALYLFRRFLEEVEA 369
>gi|316935475|ref|YP_004110457.1| carbamoyl-phosphate synthase small subunit [Rhodopseudomonas
palustris DX-1]
gi|315603189|gb|ADU45724.1| carbamoyl-phosphate synthase, small subunit [Rhodopseudomonas
palustris DX-1]
Length = 397
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 63/93 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI++ NH +AVD TLP V+ TH++L D + G+A V
Sbjct: 305 GHHGANHPVKDLTTGKVEITSMNHGFAVDKTTLPGNVQQTHVSLFDDSNCGIALSDRPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EASPGP DS +FR F +LM++ K A
Sbjct: 365 SVQYHPEASPGPRDSHYLFRRFSDLMRAKKSAA 397
>gi|414175357|ref|ZP_11429761.1| carbamoyl-phosphate synthase small chain [Afipia broomeae ATCC
49717]
gi|410889186|gb|EKS36989.1| carbamoyl-phosphate synthase small chain [Afipia broomeae ATCC
49717]
Length = 396
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI++ NH +AVD TLP V THI+L D + G+A V
Sbjct: 305 GHHGANHPVKDLTTGKVEITSMNHGFAVDKTTLPTNVTQTHISLFDDSNCGIALDDKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F+ F +LM+ K
Sbjct: 365 SVQYHPEASPGPRDSHYLFKRFADLMREKK 394
>gi|374577894|ref|ZP_09650990.1| carbamoyl-phosphate synthase, small subunit [Bradyrhizobium sp.
WSM471]
gi|374426215|gb|EHR05748.1| carbamoyl-phosphate synthase, small subunit [Bradyrhizobium sp.
WSM471]
Length = 396
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI++ NH +AVD +TLP G THI+L DG+ G+ V
Sbjct: 305 GHHGANHPVKDETTGKVEITSMNHGFAVDESTLPTGATQTHISLFDGSNCGIQLDGKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F+ F +LM+ K
Sbjct: 365 SVQYHPEASPGPRDSHYLFQRFADLMRQKK 394
>gi|374635504|ref|ZP_09707101.1| carbamoyl-phosphate synthase, small subunit [Methanotorris
formicicus Mc-S-70]
gi|373562041|gb|EHP88262.1| carbamoyl-phosphate synthase, small subunit [Methanotorris
formicicus Mc-S-70]
Length = 356
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/87 (48%), Positives = 58/87 (66%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGN PV ++ GRV I++QNH +A +LP VE+ HINLND T G+ + L
Sbjct: 266 KFGHRGGNQPVKDLTTGRVYITSQNHGFATKEESLPDDVEIMHINLNDNTIEGIKHKDLP 325
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVEL 87
+ S+QYH EA PGP D+ +F + ++L
Sbjct: 326 IWSIQYHPEAGPGPHDAKFLFDEMIKL 352
>gi|312144094|ref|YP_003995540.1| carbamoyl-phosphate synthase small subunit [Halanaerobium
hydrogeniformans]
gi|311904745|gb|ADQ15186.1| carbamoyl-phosphate synthase, small subunit [Halanaerobium
hydrogeniformans]
Length = 358
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 44/90 (48%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++NGRV IS+QNH +AV +L +E+TH+N+ND T G+ +
Sbjct: 268 KFGHRGANHPVKDLKNGRVYISSQNHGFAVKKDSLENLDIEITHLNVNDNTIEGIKHKKY 327
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
S+QYH E SPGP DS +F F+E++K
Sbjct: 328 PAFSVQYHPEGSPGPQDSHYLFDQFIEMLK 357
>gi|153953286|ref|YP_001394051.1| carbamoyl phosphate synthase small subunit [Clostridium kluyveri
DSM 555]
gi|219853918|ref|YP_002471040.1| hypothetical protein CKR_0575 [Clostridium kluyveri NBRC 12016]
gi|146346167|gb|EDK32703.1| CarA1 [Clostridium kluyveri DSM 555]
gi|219567642|dbj|BAH05626.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 349
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV N+++GRV I++QNH Y VD LP +E+TH++LNDGT G+ + L
Sbjct: 263 KFGHRGCNHPVRNLESGRVHITSQNHGYYVD--KLPDEMELTHVSLNDGTIEGMKHKKLP 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDF 84
+ S+Q+H EA PGP D++ +F +F
Sbjct: 321 IFSIQFHPEACPGPSDNNYIFDEF 344
>gi|118591041|ref|ZP_01548441.1| carbamoyl-phosphate synthase small subunit [Stappia aggregata IAM
12614]
gi|118436563|gb|EAV43204.1| carbamoyl-phosphate synthase small subunit [Stappia aggregata IAM
12614]
Length = 419
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 63/93 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI++ NH +AVD +LP V+ TH++L DG+ GLA V
Sbjct: 327 GHHGANHPVFDHTTGKVEITSMNHGFAVDADSLPDNVQQTHVSLFDGSNCGLAMKDKPVF 386
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EASPGP DS +F+ F +LM+S K A
Sbjct: 387 SVQYHPEASPGPRDSHYLFKRFTDLMESAKSAA 419
>gi|386398301|ref|ZP_10083079.1| carbamoyl-phosphate synthase, small subunit [Bradyrhizobium sp.
WSM1253]
gi|385738927|gb|EIG59123.1| carbamoyl-phosphate synthase, small subunit [Bradyrhizobium sp.
WSM1253]
Length = 396
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI++ NH +AVD +TLP G THI+L DG+ G+ V
Sbjct: 305 GHHGANHPVKDETTGKVEITSMNHGFAVDESTLPTGATQTHISLFDGSNCGIQLDGKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F+ F +LM+ K
Sbjct: 365 SVQYHPEASPGPRDSHYLFQRFADLMRQNK 394
>gi|323142840|ref|ZP_08077552.1| carbamoyl-phosphate synthase, small subunit [Succinatimonas hippei
YIT 12066]
gi|322417382|gb|EFY08004.1| carbamoyl-phosphate synthase, small subunit [Succinatimonas hippei
YIT 12066]
Length = 379
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV I GRV I++QNH +AVD TLP +++TH++L DGT G+
Sbjct: 285 KFGHHGANHPVREIATGRVYITSQNHGFAVDADTLPDTLKITHVSLFDGTLQGIERTDCP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D +F F++LM++ + R
Sbjct: 345 AFSFQGHPEASPGPHDPKPLFDHFIDLMRAYRNRG 379
>gi|225175358|ref|ZP_03729353.1| carbamoyl-phosphate synthase, small subunit [Dethiobacter
alkaliphilus AHT 1]
gi|225169110|gb|EEG77909.1| carbamoyl-phosphate synthase, small subunit [Dethiobacter
alkaliphilus AHT 1]
Length = 378
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 62/88 (70%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ RVEI+AQNHNY VD +L V +TH NL DGT G+ + L
Sbjct: 287 KFGHHGGNHPVMDLETERVEITAQNHNYCVDIKSLGGQVRLTHRNLYDGTEEGMQHVELP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
V S+Q+H EA PGP+DS +F+ F ++
Sbjct: 347 VFSVQHHPEAGPGPNDSTHIFKKFRAMI 374
>gi|406707967|ref|YP_006758319.1| carbamoyl-phosphate synthase small subunit [alpha proteobacterium
HIMB59]
gi|406653743|gb|AFS49142.1| carbamoyl-phosphate synthase, small subunit [alpha proteobacterium
HIMB59]
Length = 382
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 43/88 (48%), Positives = 60/88 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH GGNHPV N++ G+VEI++QNH + V P +E++HI+L D T G+ + +
Sbjct: 292 GHRGGNHPVKNLETGQVEITSQNHGFVVSDDGFPNDLEISHISLFDNTVDGMKSKSQPLF 351
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+QYH E+SPGP DS +F F+ELMKS
Sbjct: 352 SVQYHPESSPGPHDSRYLFDKFIELMKS 379
>gi|315452908|ref|YP_004073178.1| carbamoyl-phosphate synthase small subunit [Helicobacter felis ATCC
49179]
gi|315131960|emb|CBY82588.1| carbamoyl-phosphate synthase small chain [Helicobacter felis ATCC
49179]
Length = 376
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N GR+EISAQNHNY V P +L +TH NL DGT G+AY
Sbjct: 283 KFGHHGSNHPVLNCHTGRIEISAQNHNYCV-PESLASIATITHKNLFDGTIEGVAYKNSP 341
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
++S+Q+H EASPGP D +F++F L+
Sbjct: 342 ILSVQHHPEASPGPSDGLYIFKEFARLV 369
>gi|153005052|ref|YP_001379377.1| carbamoyl phosphate synthase small subunit [Anaeromyxobacter sp.
Fw109-5]
gi|152028625|gb|ABS26393.1| carbamoyl-phosphate synthase, small subunit [Anaeromyxobacter sp.
Fw109-5]
Length = 372
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 59/92 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV ++ G+V+I+ QNH +AVD TL K VTH+NLNDGT GL
Sbjct: 281 KFGHRGANQPVKDLVTGKVDITVQNHGFAVDDKTLGKHARVTHLNLNDGTVEGLELLDAP 340
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+ +F F +LM+ +
Sbjct: 341 AFSVQYHPEASPGPHDARQLFGRFAQLMERAR 372
>gi|88607953|ref|YP_504987.1| carbamoyl phosphate synthase small subunit [Anaplasma
phagocytophilum HZ]
gi|88599016|gb|ABD44486.1| carbamoyl-phosphate synthase, small subunit [Anaplasma
phagocytophilum HZ]
Length = 365
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 61/88 (69%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G NHPV++++ VE+++QNH Y VD +TLP +EVTHI+L DGT G+ V+
Sbjct: 275 GHRGSNHPVYSLETKSVEVTSQNHGYTVDASTLPDNIEVTHISLFDGTVEGIKMTNRPVL 334
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+QYH E PGP+DS +FR F +L+ S
Sbjct: 335 SVQYHPEGCPGPNDSHYIFRKFADLITS 362
>gi|407779312|ref|ZP_11126569.1| carbamoyl phosphate synthase small subunit [Nitratireductor
pacificus pht-3B]
gi|407298875|gb|EKF18010.1| carbamoyl phosphate synthase small subunit [Nitratireductor
pacificus pht-3B]
Length = 399
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 59/88 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD TLP GVE TH++L DG+ GL V
Sbjct: 303 GHHGANHPVKDFTTGKVEIVSMNHGFAVDGDTLPDGVEETHVSLFDGSNCGLTLTGKPVF 362
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+Q+H EASPGP DS +FR F L+++
Sbjct: 363 SVQHHPEASPGPQDSHYLFRRFANLIRA 390
>gi|428298242|ref|YP_007136548.1| carbamoyl-phosphate synthase small subunit [Calothrix sp. PCC 6303]
gi|428234786|gb|AFZ00576.1| carbamoyl-phosphate synthase small subunit [Calothrix sp. PCC 6303]
Length = 392
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 48/96 (50%), Positives = 69/96 (71%), Gaps = 5/96 (5%)
Query: 1 KFGHHGGNHPV---HNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAY 56
KFGH G N P ++Q RVEI++QNH++A+DP +LP VE++H+NLND T AG+ +
Sbjct: 290 KFGHRGLNQPAGLPSDLQ-ARVEITSQNHSFALDPKSLPNTTVEISHLNLNDQTVAGVRH 348
Query: 57 PALNVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
L + S+QYH EASPGP D+D +F FV++M++ K
Sbjct: 349 RNLPIFSVQYHPEASPGPHDADYLFEQFVQVMRTAK 384
>gi|254521946|ref|ZP_05134001.1| carbamoyl-phosphate synthase, small subunit [Stenotrophomonas sp.
SKA14]
gi|219719537|gb|EED38062.1| carbamoyl-phosphate synthase, small subunit [Stenotrophomonas sp.
SKA14]
Length = 375
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 59/90 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ NGRV I++QNH +AVD +TLP + VTH +L DGT G+A +
Sbjct: 285 GHHGANHPVQDLDNGRVMITSQNHGFAVDESTLPATLRVTHRSLFDGTNQGIARTDVPAF 344
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D +F FV LM+ K
Sbjct: 345 SFQGHPEASPGPTDVGPLFDRFVALMEQSK 374
>gi|290968206|ref|ZP_06559749.1| carbamoyl-phosphate synthase, small subunit [Megasphaera genomosp.
type_1 str. 28L]
gi|290781688|gb|EFD94273.1| carbamoyl-phosphate synthase, small subunit [Megasphaera genomosp.
type_1 str. 28L]
Length = 352
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 61/88 (69%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGH G NHPV ++Q GRV I++QNH YA+ TLP +VT+ +L+D T G P+ ++
Sbjct: 263 FGHRGANHPVQDVQTGRVYITSQNHGYAIAADTLPPTAQVTYRHLHDNTLEGFVVPSQHI 322
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMK 89
M +QYH EASPGP DS +F FV++M+
Sbjct: 323 MCVQYHPEASPGPTDSLYLFEQFVKMME 350
>gi|78188090|ref|YP_378428.1| carbamoyl phosphate synthase small subunit [Chlorobium
chlorochromatii CaD3]
gi|78170289|gb|ABB27385.1| carbamoyl-phosphate synthase small subunit [Chlorobium
chlorochromatii CaD3]
Length = 367
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 61/88 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N+ G++EI++QNH +AV LP+ + +TH+NL D T G+ + L
Sbjct: 277 KFGHHGGNHPVRNLATGQIEITSQNHGFAVAMEALPEELTMTHLNLYDHTVEGVRHKNLP 336
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EA+PGP DS +F +F LM
Sbjct: 337 CFSVQYHPEAAPGPHDSHYLFDEFTSLM 364
>gi|149177234|ref|ZP_01855840.1| carbamoyl-phosphate synthase small subunit [Planctomyces maris DSM
8797]
gi|148843948|gb|EDL58305.1| carbamoyl-phosphate synthase small subunit [Planctomyces maris DSM
8797]
Length = 392
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 60/92 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV N G+VEI++QNH +A+DP T P VE+THIN+ND T AGL +
Sbjct: 298 KFGHRGANQPVINHATGQVEITSQNHGFAIDPETKPDDVEITHINMNDNTVAGLRHKTHP 357
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EAS GP DS +F+ F E + +
Sbjct: 358 AFSVQYHPEASAGPHDSHYLFQQFFESISQAR 389
>gi|298491200|ref|YP_003721377.1| carbamoyl-phosphate synthase small subunit ['Nostoc azollae' 0708]
gi|298233118|gb|ADI64254.1| carbamoyl-phosphate synthase, small subunit ['Nostoc azollae' 0708]
Length = 385
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 49/96 (51%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
KFGH G N P Q R+EI++QNH++A+DP +LP V EV+H+NLND T AG+ + +L
Sbjct: 290 KFGHRGLNQPTGLQQ--RIEITSQNHSFAIDPDSLPSAVVEVSHLNLNDRTVAGVRHKSL 347
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
V S+QYH EASPGP D+D +F FV M++ + A
Sbjct: 348 PVFSVQYHPEASPGPHDADYLFEQFVLEMQTARQAA 383
>gi|220917428|ref|YP_002492732.1| carbamoyl phosphate synthase small subunit [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219955282|gb|ACL65666.1| carbamoyl-phosphate synthase, small subunit [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 373
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 59/89 (66%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV + G+V+I+AQNH +AVD A+L K VTH+NLNDGT G+
Sbjct: 282 KFGHRGANQPVKELDTGKVDITAQNHGFAVDDASLGKRARVTHVNLNDGTVEGIEVLDAP 341
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
S+QYH E+SPGP D+ +F FV +M+
Sbjct: 342 AFSVQYHPESSPGPHDARPLFARFVAMME 370
>gi|282899516|ref|ZP_06307480.1| Carbamoyl-phosphate synthase, small subunit [Cylindrospermopsis
raciborskii CS-505]
gi|281195395|gb|EFA70328.1| Carbamoyl-phosphate synthase, small subunit [Cylindrospermopsis
raciborskii CS-505]
Length = 385
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 48/96 (50%), Positives = 68/96 (70%), Gaps = 3/96 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
KFGH G N P +Q RVEI++QNH++A+DP +LP V EV+H+NLND T AG+ + +L
Sbjct: 290 KFGHRGLNQPA-GLQT-RVEITSQNHSFAIDPDSLPSAVVEVSHLNLNDQTVAGVRHKSL 347
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
+ S+QYH EASPGP D+D +F FV M++ + +
Sbjct: 348 PIFSVQYHPEASPGPHDADYLFEQFVLEMQTARQKG 383
>gi|345302730|ref|YP_004824632.1| carbamoyl-phosphate synthase small subunit [Rhodothermus marinus
SG0.5JP17-172]
gi|345111963|gb|AEN72795.1| carbamoyl-phosphate synthase, small subunit [Rhodothermus marinus
SG0.5JP17-172]
Length = 379
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPALNV 61
GH G NHPV N++ GRVE++ QNH +AV+ ++ P+ EV+HINLND T GL + +
Sbjct: 279 GHRGANHPVKNLRTGRVEVTTQNHGFAVEAESVDPREAEVSHINLNDRTVEGLRFKSFAG 338
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKS 90
+S+QYH EASPGP DS +F +F+EL+ +
Sbjct: 339 LSVQYHPEASPGPHDSRYLFDEFLELVAA 367
>gi|389793596|ref|ZP_10196758.1| carbamoyl-phosphate synthase small subunit [Rhodanobacter fulvus
Jip2]
gi|388433708|gb|EIL90670.1| carbamoyl-phosphate synthase small subunit [Rhodanobacter fulvus
Jip2]
Length = 375
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 58/92 (63%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ +GRV I++QNH +AVDPATLP VTH +L DG+ G A
Sbjct: 284 KFGHHGANHPVKDLDDGRVLITSQNHGFAVDPATLPANTRVTHTSLFDGSLQGFALTDRP 343
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
Q H EASPGP D +F+ F LM+ +
Sbjct: 344 AFCFQGHPEASPGPLDVGYLFKRFAALMEEAR 375
>gi|197122645|ref|YP_002134596.1| carbamoyl phosphate synthase small subunit [Anaeromyxobacter sp. K]
gi|196172494|gb|ACG73467.1| carbamoyl-phosphate synthase, small subunit [Anaeromyxobacter sp.
K]
Length = 373
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 59/89 (66%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV + G+V+I+AQNH +AVD A+L K VTH+NLNDGT G+
Sbjct: 282 KFGHRGANQPVKELDTGKVDITAQNHGFAVDDASLGKRARVTHVNLNDGTVEGIEVLDAP 341
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
S+QYH E+SPGP D+ +F FV +M+
Sbjct: 342 AFSVQYHPESSPGPHDARPLFARFVAMME 370
>gi|428227212|ref|YP_007111309.1| carbamoyl-phosphate synthase small subunit [Geitlerinema sp. PCC
7407]
gi|427987113|gb|AFY68257.1| carbamoyl-phosphate synthase small subunit [Geitlerinema sp. PCC
7407]
Length = 386
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 46/95 (48%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P ++ +VEI++QNH +A+ +L VE+TH+NLND T AGL + L
Sbjct: 290 KFGHRGLNQPA-GLEQRQVEITSQNHGFAITEESLGADVEITHLNLNDRTVAGLRHKELP 348
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
+ S+QYH EASPGP D+D +F FVE M++ + R+
Sbjct: 349 LFSVQYHPEASPGPHDADYLFEQFVEAMRAARQRS 383
>gi|335050056|ref|ZP_08543036.1| carbamoyl-phosphate synthase, small subunit [Megasphaera sp. UPII
199-6]
gi|333761688|gb|EGL39220.1| carbamoyl-phosphate synthase, small subunit [Megasphaera sp. UPII
199-6]
Length = 352
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 61/89 (68%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGH G NHPV ++Q GRV I++QNH YA+ TLP +VT+ +L+D T G P+ ++
Sbjct: 263 FGHRGANHPVQDVQTGRVYITSQNHGYAIAADTLPPTAQVTYRHLHDNTLEGFVVPSQHI 322
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKS 90
M +QYH EASPGP DS +F FV++M+
Sbjct: 323 MCVQYHPEASPGPTDSLYLFEQFVKMMEE 351
>gi|407474775|ref|YP_006789175.1| carbamoyl-phosphate synthase small subunit [Clostridium acidurici
9a]
gi|407051283|gb|AFS79328.1| carbamoyl-phosphate synthase, small subunit [Clostridium acidurici
9a]
Length = 357
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 44/93 (47%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
K+GH GGNH V++I R I++QNH Y+VD ++ KG+ +THINLND T G+ + L
Sbjct: 265 KYGHRGGNHGVYDIDTDRAYITSQNHGYSVDAESVKSKGMVITHINLNDETVEGMKHENL 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+Q+H E +PGPDDS+ +F F+++MK K
Sbjct: 325 PIFSVQFHPEGAPGPDDSEYLFDKFIDMMKEGK 357
>gi|319782014|ref|YP_004141490.1| carbamoyl-phosphate synthase small subunit [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317167902|gb|ADV11440.1| carbamoyl-phosphate synthase, small subunit [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 405
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 45/87 (51%), Positives = 59/87 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE TH++L DG+ G+ V
Sbjct: 307 GHHGANHPVKDHTTGKVEIVSMNHGFAVDADSLPSGVEETHVSLFDGSNCGITLTGRPVF 366
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMK 89
S+Q+H EASPGP DS +FR FV L++
Sbjct: 367 SVQHHPEASPGPQDSHYLFRRFVNLIR 393
>gi|399077541|ref|ZP_10752441.1| carbamoyl-phosphate synthase, small subunit [Caulobacter sp. AP07]
gi|398035204|gb|EJL28453.1| carbamoyl-phosphate synthase, small subunit [Caulobacter sp. AP07]
Length = 388
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI + NH + VD A+LP+ V TH++L DGT AG+A V
Sbjct: 299 GHHGANHPVKDLTTGKVEIVSMNHGFTVDSASLPEAVTETHVSLFDGTNAGIAVTGKPVF 358
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +F F LM + K
Sbjct: 359 SVQHHPEASPGPTDSLYLFERFAGLMDAAK 388
>gi|456063112|ref|YP_007502082.1| carbamoyl-phosphate synthase, small subunit [beta proteobacterium
CB]
gi|455440409|gb|AGG33347.1| carbamoyl-phosphate synthase, small subunit [beta proteobacterium
CB]
Length = 400
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 59/90 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ GRV I++QNH +AVD LP + VTH++L DG+ GLA+
Sbjct: 302 KFGHHGANHPVKDLDTGRVAITSQNHGFAVDANALPDNIRVTHVSLFDGSLQGLAWKDKP 361
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
+ Q H EASPGP D +F FVELM +
Sbjct: 362 ALCFQGHPEASPGPHDIAYLFDRFVELMNA 391
>gi|291550824|emb|CBL27086.1| carbamoyl-phosphate synthase, small subunit [Ruminococcus torques
L2-14]
Length = 374
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 47/93 (50%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHI-NLNDGTCAGLAYPAL 59
K+GH GGNHPV ++Q GRV IS+QNH Y VD + V V N+NDGT GLAY
Sbjct: 282 KYGHRGGNHPVKDLQTGRVYISSQNHGYVVDEDKIDPNVAVPAFKNVNDGTNEGLAYVGK 341
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
N+ ++Q+H EA PGP DS +F F+E+M K
Sbjct: 342 NIFTVQFHPEACPGPQDSGYLFDRFLEMMGGEK 374
>gi|373496052|ref|ZP_09586600.1| carbamoyl-phosphate synthase, small subunit [Fusobacterium sp.
12_1B]
gi|404369068|ref|ZP_10974414.1| carbamoyl-phosphate synthase, small subunit [Fusobacterium ulcerans
ATCC 49185]
gi|313688360|gb|EFS25195.1| carbamoyl-phosphate synthase, small subunit [Fusobacterium ulcerans
ATCC 49185]
gi|371965963|gb|EHO83455.1| carbamoyl-phosphate synthase, small subunit [Fusobacterium sp.
12_1B]
Length = 350
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K+GH G NHPV +++ ++ I++QNH Y VD +P+ ++VTHINLND + G+ L
Sbjct: 263 KYGHRGCNHPVKDLEKNKIFITSQNHGYVVD--NVPEAMKVTHINLNDNSIEGMKSSELK 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+M +QYH EA PGP DSD +F DF+++++
Sbjct: 321 IMCVQYHPEAWPGPSDSDYLFDDFLQVIE 349
>gi|334340888|ref|YP_004545868.1| carbamoyl-phosphate synthase small subunit [Desulfotomaculum
ruminis DSM 2154]
gi|334092242|gb|AEG60582.1| carbamoyl-phosphate synthase, small subunit [Desulfotomaculum
ruminis DSM 2154]
Length = 371
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 61/85 (71%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ GRV I++QNH + VD +LP +EV+HINLND T GL + L
Sbjct: 266 KFGHRGANHPVKDLRTGRVYITSQNHGFTVDQDSLPPEMEVSHINLNDHTVEGLQHKTLP 325
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFV 85
+ S+QYH EA+PGP DS+ +F F+
Sbjct: 326 IFSVQYHPEAAPGPMDSEYLFDHFL 350
>gi|282896445|ref|ZP_06304466.1| Carbamoyl-phosphate synthase, small subunit [Raphidiopsis brookii
D9]
gi|281198733|gb|EFA73613.1| Carbamoyl-phosphate synthase, small subunit [Raphidiopsis brookii
D9]
Length = 385
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 48/96 (50%), Positives = 68/96 (70%), Gaps = 3/96 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
KFGH G N P +Q RVEI++QNH++A+DP +LP V EV+H+NLND T AG+ + +L
Sbjct: 290 KFGHRGLNQPA-GLQT-RVEITSQNHSFAIDPNSLPSAVVEVSHLNLNDQTVAGVRHKSL 347
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
+ S+QYH EASPGP D+D +F FV M++ + +
Sbjct: 348 PIFSVQYHPEASPGPHDADYLFEQFVLEMQTARQKG 383
>gi|239832360|ref|ZP_04680689.1| carbamoyl-phosphate synthase, small subunit [Ochrobactrum
intermedium LMG 3301]
gi|239824627|gb|EEQ96195.1| carbamoyl-phosphate synthase, small subunit [Ochrobactrum
intermedium LMG 3301]
Length = 410
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 47/93 (50%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+ VE TH++L DGT GL V
Sbjct: 309 GHHGANHPVKDYTTGKVEIVSMNHGFAVDSDSLPENVEETHVSLFDGTNCGLRVVGKPVF 368
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR F+ L++ K +A
Sbjct: 369 SVQHHPEASPGPQDSHYLFRRFINLIREKKGQA 401
>gi|373470828|ref|ZP_09561927.1| carbamoyl-phosphate synthase, small subunit [Lachnospiraceae
bacterium oral taxon 082 str. F0431]
gi|371761705|gb|EHO50299.1| carbamoyl-phosphate synthase, small subunit [Lachnospiraceae
bacterium oral taxon 082 str. F0431]
Length = 355
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 44/90 (48%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEV-THINLNDGTCAGLAYPAL 59
++GH GGNHPV +++ GR IS+QNH YAVD +TL K + V +N+NDGT GL Y
Sbjct: 265 RYGHRGGNHPVKDLETGRTYISSQNHGYAVDESTLDKNICVPAFVNVNDGTNEGLRYINK 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ ++QYH EA PGP DS +F F+++M+
Sbjct: 325 KIFTVQYHPEACPGPRDSSYLFDKFIKMME 354
>gi|357032566|ref|ZP_09094501.1| carbamoyl phosphate synthase small subunit [Gluconobacter morbifer
G707]
gi|356413557|gb|EHH67209.1| carbamoyl phosphate synthase small subunit [Gluconobacter morbifer
G707]
Length = 453
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 44/86 (51%), Positives = 59/86 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G N PV ++ GRVEI++QNH +AVD +LP V+VTH++L DG+ G+A +
Sbjct: 360 GHRGANQPVKDLSTGRVEITSQNHGFAVDEKSLPADVKVTHVSLFDGSNEGIASTTKDAF 419
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EASPGP DS +F FV +M
Sbjct: 420 SVQYHPEASPGPSDSFYLFERFVAVM 445
>gi|221632247|ref|YP_002521468.1| carbamoyl-phosphate synthase small subunit [Thermomicrobium roseum
DSM 5159]
gi|221155412|gb|ACM04539.1| carbamoyl-phosphate synthase, small subunit [Thermomicrobium roseum
DSM 5159]
Length = 383
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 48/96 (50%), Positives = 66/96 (68%), Gaps = 3/96 (3%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK--GVEVTHINLNDGTCAGLAYPAL 59
FGH GGNHPV I GRV I++QNH Y V ++P+ G +V IN+NDGT GL + +L
Sbjct: 276 FGHRGGNHPVKEIPTGRVRITSQNHGYCVAHDSIPEQDGWQVWMINVNDGTVEGLRHRSL 335
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
V+++Q+H E SPGP DS +F FVEL++ ++RA
Sbjct: 336 PVLTVQFHPEGSPGPQDSQDLFDAFVELVQQ-RWRA 370
>gi|398818369|ref|ZP_10576961.1| carbamoyl-phosphate synthase, small subunit [Brevibacillus sp.
BC25]
gi|398028137|gb|EJL21661.1| carbamoyl-phosphate synthase, small subunit [Brevibacillus sp.
BC25]
Length = 365
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV + GR I++QNH+YAV +L +EVTHI LNDGT G+ + A
Sbjct: 264 KFGHRGGNHPVKELPTGRTYITSQNHSYAVKEDSLAGTELEVTHIALNDGTIEGVRHAAK 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
N S+QYH EA+PGP DS +F F+ +M++ K
Sbjct: 324 NAFSVQYHPEAAPGPYDSGYLFDQFLAMMETAK 356
>gi|319649636|ref|ZP_08003792.1| carbamoyl-phosphate synthase small subunit [Bacillus sp.
2_A_57_CT2]
gi|317398798|gb|EFV79480.1| carbamoyl-phosphate synthase small subunit [Bacillus sp.
2_A_57_CT2]
Length = 368
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 43/93 (46%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV ++Q G+V +++QNH Y+V+ ++ +EVTHI LNDGT GL + +
Sbjct: 264 KFGHRGSNHPVKDLQTGKVALTSQNHGYSVEENSISGSPLEVTHIALNDGTIEGLKHKEV 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
++QYH EASPGP+D++ +F F+++++S K
Sbjct: 324 PAFTVQYHPEASPGPEDANGLFEQFLQMIESHK 356
>gi|163761142|ref|ZP_02168219.1| carbamoyl-phosphate synthase small subunit [Hoeflea phototrophica
DFL-43]
gi|162281693|gb|EDQ31987.1| carbamoyl-phosphate synthase small subunit [Hoeflea phototrophica
DFL-43]
Length = 416
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 46/87 (52%), Positives = 60/87 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+GVE TH++L DGT GL V
Sbjct: 319 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSDSLPEGVEETHVSLFDGTNCGLRLAGKPVF 378
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMK 89
S+Q+H EASPGP DS +FR F+ L++
Sbjct: 379 SVQHHPEASPGPQDSHYLFRRFMNLVR 405
>gi|220930278|ref|YP_002507187.1| carbamoyl-phosphate synthase small subunit [Clostridium
cellulolyticum H10]
gi|220000606|gb|ACL77207.1| carbamoyl-phosphate synthase, small subunit [Clostridium
cellulolyticum H10]
Length = 351
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV + GR I++QNHNY +D +T + +TH N+ND T G + L
Sbjct: 265 KFGHHGGNHPVKDYITGRCYITSQNHNYVID-STSSDDIVITHKNVNDDTIEGFRHKTLP 323
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
V+S+QYH EA+PGP DS +F DF+++M
Sbjct: 324 VISVQYHPEAAPGPQDSAYIFDDFIKMM 351
>gi|86158045|ref|YP_464830.1| carbamoyl phosphate synthase small subunit [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85774556|gb|ABC81393.1| carbamoyl-phosphate synthase small subunit [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 373
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 59/89 (66%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV + G+V+I+AQNH +AVD A+L K VTH+NLNDGT G+
Sbjct: 282 KFGHRGANQPVKELDTGKVDITAQNHGFAVDDASLGKRARVTHVNLNDGTVEGIEVLDAP 341
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
S+QYH E+SPGP D+ +F FV +M+
Sbjct: 342 AFSVQYHPESSPGPHDARPLFARFVAMME 370
>gi|410088292|ref|ZP_11284987.1| Carbamoyl-phosphate synthase small chain [Morganella morganii SC01]
gi|409765214|gb|EKN49329.1| Carbamoyl-phosphate synthase small chain [Morganella morganii SC01]
Length = 379
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 62/93 (66%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I+N V I+AQNH +AVD A LP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDIENNVVMITAQNHGFAVDEAALPATLRVTHKSLFDGTLQGIHRNDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKY 93
S Q H EASPGP D+ +F F+ELMK+ ++
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELMKNARH 379
>gi|389808145|ref|ZP_10204555.1| carbamoyl phosphate synthase small subunit [Rhodanobacter
thiooxydans LCS2]
gi|388443023|gb|EIL99182.1| carbamoyl phosphate synthase small subunit [Rhodanobacter
thiooxydans LCS2]
Length = 378
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 60/95 (63%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ +G V I++QNH +AVDPATLP V VTH++L DG+ G A
Sbjct: 284 KFGHHGANHPVKDLDDGHVLITSQNHGFAVDPATLPANVRVTHVSLFDGSLQGFALTDRP 343
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
Q H EASPGP D +F+ F LM+ + A
Sbjct: 344 AFCFQGHPEASPGPLDIGYLFQRFAALMQEARTHA 378
>gi|444917381|ref|ZP_21237482.1| Carbamoyl-phosphate synthase small chain [Cystobacter fuscus DSM
2262]
gi|444711135|gb|ELW52088.1| Carbamoyl-phosphate synthase small chain [Cystobacter fuscus DSM
2262]
Length = 372
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 59/88 (67%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV ++ G+VEI++QNH +AVD A++ V+H+NLNDGT GL P
Sbjct: 282 KFGHRGANQPVKDLLTGKVEITSQNHGFAVDDASVKGRATVSHLNLNDGTVEGLNVPDAR 341
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EASPGP D+ +F F +LM
Sbjct: 342 AFSVQYHPEASPGPHDARYLFTRFAKLM 369
>gi|383765552|ref|YP_005444533.1| carbamoyl-phosphate synthase small subunit [Phycisphaera mikurensis
NBRC 102666]
gi|381385820|dbj|BAM02636.1| carbamoyl-phosphate synthase small chain [Phycisphaera mikurensis
NBRC 102666]
Length = 406
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV N+ G+VEI++QNH +AVD +L +G E TH+NLND T G +
Sbjct: 292 KFGHRGGNQPVQNLGTGKVEITSQNHGFAVDRESLAARGAEPTHVNLNDRTLEGFRHAEE 351
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
V ++QYH EASPGP D+ +F F+E+M S
Sbjct: 352 AVFAVQYHPEASPGPHDARYLFDCFIEMMDS 382
>gi|294506966|ref|YP_003571024.1| carbamoyl-phosphate synthase, small chain [Salinibacter ruber M8]
gi|294343294|emb|CBH24072.1| carbamoyl-phosphate synthase, small chain [Salinibacter ruber M8]
Length = 386
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPALNV 61
GH G NHPV N+ G+VE++ QNH +AVDP ++ P+ VTH+NLND T GL +
Sbjct: 280 GHRGANHPVKNLDTGQVEVTTQNHGFAVDPESIAPETARVTHVNLNDDTIEGLEFKTFAG 339
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELM 88
MSLQYH EASPGP DS F F+EL+
Sbjct: 340 MSLQYHPEASPGPHDSHYHFNRFMELV 366
>gi|226313359|ref|YP_002773253.1| carbamoyl-phosphate synthase small chain [Brevibacillus brevis NBRC
100599]
gi|226096307|dbj|BAH44749.1| carbamoyl-phosphate synthase small chain [Brevibacillus brevis NBRC
100599]
Length = 365
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV + GR I++QNH+YAV +L +EVTHI LNDGT G+ + A
Sbjct: 264 KFGHRGGNHPVKELPTGRTYITSQNHSYAVKEDSLAGTELEVTHIALNDGTIEGVRHAAK 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
N S+QYH EA+PGP DS +F F+ +M++ K
Sbjct: 324 NAFSVQYHPEAAPGPYDSGYLFDQFLAMMETAK 356
>gi|73662879|ref|YP_301660.1| carbamoyl phosphate synthase small subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|82592664|sp|Q49WY3.1|CARA_STAS1 RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|72495394|dbj|BAE18715.1| carbamoyl-phosphate synthase small subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 366
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G++ +++QNH YA+D A+L +EVTHI +ND T GL + +L
Sbjct: 266 KFGHRGANHPVKDLKTGKIALTSQNHGYAIDKASLKNTDLEVTHIAINDDTVEGLRHKSL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F +F++++ K +
Sbjct: 326 PAFSVQYHPEACPGPSDSNYLFDEFIDMINEYKTK 360
>gi|444310472|ref|ZP_21146093.1| carbamoyl phosphate synthase small subunit [Ochrobactrum
intermedium M86]
gi|443486034|gb|ELT48815.1| carbamoyl phosphate synthase small subunit [Ochrobactrum
intermedium M86]
Length = 407
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 47/93 (50%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+ VE TH++L DGT GL V
Sbjct: 306 GHHGANHPVKDYTTGKVEIVSMNHGFAVDSDSLPENVEETHVSLFDGTNCGLRVVGKPVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR F+ L++ K +A
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINLIREKKGQA 398
>gi|34558335|ref|NP_908150.1| carbamoyl phosphate synthase small subunit [Wolinella succinogenes
DSM 1740]
gi|34484054|emb|CAE11050.1| CARBAMOYL-PHOSPHATE SYNTHASE SMALL CHAIN [Wolinella succinogenes]
Length = 377
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 46/87 (52%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N+ +G VEI+AQNHNY+V P + + EVT+ NL DGT GL Y
Sbjct: 286 KFGHHGGNHPVKNLLSGEVEITAQNHNYSV-PDEIEEIAEVTYRNLFDGTIEGLKYKEGV 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVEL 87
+ S+Q+H EASPGP ++ +F+ F ++
Sbjct: 345 IYSVQHHPEASPGPKEASSIFKIFAKI 371
>gi|154245191|ref|YP_001416149.1| carbamoyl phosphate synthase small subunit [Xanthobacter
autotrophicus Py2]
gi|154159276|gb|ABS66492.1| carbamoyl-phosphate synthase, small subunit [Xanthobacter
autotrophicus Py2]
Length = 411
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 45/86 (52%), Positives = 60/86 (69%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI++ NH +AVD TLPK TH++L DG+ AG+A V
Sbjct: 320 GHHGANHPVKDLTTGKVEITSMNHGFAVDRETLPKNAVETHVSLFDGSNAGIALADRPVF 379
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EASPGP DS +F F+E++
Sbjct: 380 SVQYHPEASPGPQDSHYLFDRFIEMI 405
>gi|418576419|ref|ZP_13140565.1| carbamoyl phosphate synthase small subunit [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
gi|379325481|gb|EHY92613.1| carbamoyl phosphate synthase small subunit [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
Length = 366
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G++ +++QNH YA+D A+L +EVTHI +ND T GL + +L
Sbjct: 266 KFGHRGANHPVKDLKTGKIALTSQNHGYAIDKASLKNTDLEVTHIAINDDTVEGLRHKSL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F +F++++ K +
Sbjct: 326 PAFSVQYHPEACPGPSDSNYLFDEFIDMINEYKTK 360
>gi|255505844|ref|ZP_05348439.3| carbamoyl-phosphate synthase, small subunit [Bryantella
formatexigens DSM 14469]
gi|255265605|gb|EET58810.1| carbamoyl-phosphate synthase, small subunit [Marvinbryantia
formatexigens DSM 14469]
Length = 470
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEV-THINLNDGTCAGLAYPAL 59
K+GH GGNHPV +++ GRV IS+QNH Y VD L V V N+NDGT GLAY
Sbjct: 378 KYGHRGGNHPVKDLKTGRVYISSQNHGYVVDTKNLDASVAVPAFTNVNDGTNEGLAYTGK 437
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
N+ ++Q+H EA PGP DS +F F+++M+
Sbjct: 438 NIFTVQFHPEACPGPQDSGYLFDRFMKMME 467
>gi|83815752|ref|YP_445091.1| carbamoyl-phosphate synthase small subunit [Salinibacter ruber DSM
13855]
gi|83757146|gb|ABC45259.1| carbamoyl-phosphate synthase, small subunit [Salinibacter ruber DSM
13855]
Length = 386
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPALNV 61
GH G NHPV N+ G+VE++ QNH +AVDP ++ P+ VTH+NLND T GL +
Sbjct: 280 GHRGANHPVKNLDTGQVEVTTQNHGFAVDPESIAPETARVTHVNLNDDTIEGLEFKTFAG 339
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELM 88
MSLQYH EASPGP DS F F+EL+
Sbjct: 340 MSLQYHPEASPGPHDSHYHFNRFMELV 366
>gi|152991364|ref|YP_001357086.1| carbamoyl phosphate synthase small subunit [Nitratiruptor sp.
SB155-2]
gi|151423225|dbj|BAF70729.1| carbamoylphosphate synthase, small subunit [Nitratiruptor sp.
SB155-2]
Length = 379
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 48/88 (54%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N + RVEI+AQNHNY V P + EVTH NL DGT G+ Y
Sbjct: 287 KFGHHGGNHPVRNEKTKRVEITAQNHNYNV-PVGIETVAEVTHKNLFDGTIEGIKYKDEP 345
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
+ S+Q+H EASPGP +S +F +F L+
Sbjct: 346 IFSVQHHPEASPGPHESAYIFEEFTRLI 373
>gi|82701612|ref|YP_411178.1| carbamoyl-phosphate synthase, small subunit [Nitrosospira
multiformis ATCC 25196]
gi|82409677|gb|ABB73786.1| carbamoyl-phosphate synthase small subunit [Nitrosospira
multiformis ATCC 25196]
Length = 383
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 46/95 (48%), Positives = 59/95 (62%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ G+V I++QNH +AVD ATLP VTH++L DG+ G
Sbjct: 288 KFGHHGANHPVQDLGTGKVIITSQNHGFAVDTATLPANARVTHLSLFDGSLQGFELAGKP 347
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
V Q H EASPGP D D +F F LM+ + +A
Sbjct: 348 VFCFQGHPEASPGPHDLDYLFDKFAGLMERKRTKA 382
>gi|418940769|ref|ZP_13494123.1| carbamoyl-phosphate synthase, small subunit [Rhizobium sp.
PDO1-076]
gi|375052593|gb|EHS49006.1| carbamoyl-phosphate synthase, small subunit [Rhizobium sp.
PDO1-076]
Length = 401
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+ VE TH++L DGT GL V
Sbjct: 304 GHHGANHPVKDFTTGKVEIVSMNHGFAVDSKSLPESVEETHVSLFDGTNCGLRLKGRPVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ +++ K
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFINMVRENK 393
>gi|384263576|ref|YP_005418765.1| Carbamoyl-phosphate synthase small subunit [Rhodospirillum
photometricum DSM 122]
gi|378404679|emb|CCG09795.1| Carbamoyl-phosphate synthase small subunit [Rhodospirillum
photometricum DSM 122]
Length = 389
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 47/88 (53%), Positives = 59/88 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G NHPV + G+VEI++ NH +AVD A+LP GV TH +L DG GLA V
Sbjct: 299 GHRGANHPVKDHTTGKVEITSMNHGFAVDRASLPPGVTETHTSLFDGVLEGLAVDGKPVF 358
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+QYH EASPGP DS +F+ FV+LM +
Sbjct: 359 SVQYHPEASPGPQDSHYLFQRFVDLMAA 386
>gi|302670199|ref|YP_003830159.1| carbamoyl-phosphate synthase small subunit [Butyrivibrio
proteoclasticus B316]
gi|302394672|gb|ADL33577.1| carbamoyl-phosphate synthase small subunit CarA [Butyrivibrio
proteoclasticus B316]
Length = 409
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
K+GH GGNHPV ++ NGRV IS+QNH Y VD L K V E IN+NDGT GL+Y
Sbjct: 317 KYGHRGGNHPVKDLSNGRVYISSQNHGYVVDTDRLDKAVAEPAFINVNDGTNEGLSYVGK 376
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
N+ ++Q+H EA PGP DS +F F+ +M + K
Sbjct: 377 NIFTVQFHPEACPGPQDSSYLFDRFIGMMCAQK 409
>gi|430004214|emb|CCF20005.1| Carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Rhizobium sp.]
Length = 401
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 62/90 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHGGNHPV + G+VEI + NH +AVD TLP+GVE TH++L DG+ GL +
Sbjct: 304 GHHGGNHPVKDHTTGKVEIVSMNHGFAVDANTLPEGVEETHVSLFDGSNCGLRVSGKPIF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ +++ K
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFINMVRERK 393
>gi|56460089|ref|YP_155370.1| carbamoyl phosphate synthase small subunit [Idiomarina loihiensis
L2TR]
gi|56179099|gb|AAV81821.1| Carbamoylphosphate synthase small subunit [Idiomarina loihiensis
L2TR]
Length = 381
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 60/90 (66%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV +++ RV I++QNH +AVD LP +EVTH++L DGT G+
Sbjct: 290 KFGHHGANHPVQDLKTKRVMITSQNHGFAVDEKQLPDNLEVTHVSLFDGTLQGIRRKDKP 349
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D+ +F F+ELM++
Sbjct: 350 AFSFQGHPEASPGPHDASELFDQFIELMQA 379
>gi|206889977|ref|YP_002249057.1| carbamoyl-phosphate synthase, small subunit [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206741915|gb|ACI20972.1| carbamoyl-phosphate synthase, small subunit [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 363
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 63/90 (70%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ GR+ I+AQNHNY VD ++L V +TH NL DGT G+ +
Sbjct: 270 KFGHHGGNHPVKDLKTGRISITAQNHNYCVDISSLKGQVRLTHKNLYDGTEEGMEHVEYP 329
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
+ S+Q+H EA PGP+D+ VF F E+++
Sbjct: 330 IFSVQHHPEAGPGPNDALDVFERFREIVRE 359
>gi|431805514|ref|YP_007232415.1| carbamoyl-phosphate synthase small chain [Liberibacter crescens
BT-1]
gi|430799489|gb|AGA64160.1| Carbamoyl-phosphate synthase small chain [Liberibacter crescens
BT-1]
Length = 396
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 46/84 (54%), Positives = 56/84 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV N G+VEI + NH + +D +T PKGVE THI+L DG+ GL V
Sbjct: 304 GHHGANHPVKNCITGKVEIVSMNHGFTIDSSTFPKGVEETHISLFDGSNCGLRLVDKPVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVE 86
S+QYH EASPGP DS +F F+E
Sbjct: 364 SVQYHPEASPGPQDSYYLFSLFME 387
>gi|254500596|ref|ZP_05112747.1| carbamoyl-phosphate synthase, small subunit [Labrenzia alexandrii
DFL-11]
gi|222436667|gb|EEE43346.1| carbamoyl-phosphate synthase, small subunit [Labrenzia alexandrii
DFL-11]
Length = 405
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 62/90 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + +G+VEI++ NH +AVD +LP V+ TH++L DG+ GL V
Sbjct: 314 GHHGANHPVLDQTSGKVEITSMNHGFAVDAESLPDNVQQTHVSLFDGSNCGLEMKDKPVF 373
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F+ F +LM++ K
Sbjct: 374 SVQYHPEASPGPRDSRYLFKRFTDLMETAK 403
>gi|197303252|ref|ZP_03168293.1| hypothetical protein RUMLAC_01975 [Ruminococcus lactaris ATCC
29176]
gi|197297678|gb|EDY32237.1| carbamoyl-phosphate synthase, small subunit [Ruminococcus lactaris
ATCC 29176]
Length = 374
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 47/93 (50%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
K+GH GGNHPV ++Q GRV IS+QNH Y VD + PK N+NDGT GLAY
Sbjct: 282 KYGHRGGNHPVKDLQTGRVYISSQNHGYVVDDENVDPKIAVPAFKNVNDGTNEGLAYVGK 341
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
N+ ++Q+H EA PGP DS +F F+E+M K
Sbjct: 342 NIFTVQFHPEACPGPQDSGYLFDRFIEMMGGTK 374
>gi|389815961|ref|ZP_10207198.1| carbamoylphosphate synthase small subunit [Planococcus antarcticus
DSM 14505]
gi|388465455|gb|EIM07772.1| carbamoylphosphate synthase small subunit [Planococcus antarcticus
DSM 14505]
Length = 365
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 7/96 (7%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLA---Y 56
KFGH GGNHPV ++ G++EI++QNH YAVD TL ++VTH LNDGT GLA Y
Sbjct: 267 KFGHRGGNHPVRDLVTGKIEITSQNHGYAVDEDTLQGTRLKVTHSALNDGTNEGLAHLDY 326
Query: 57 PALNVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
PA V QYH E+SPGP+DS+ +F F+++M + +
Sbjct: 327 PAFTV---QYHPESSPGPEDSNYLFDRFIDVMNATR 359
>gi|218781318|ref|YP_002432636.1| carbamoyl-phosphate synthase small subunit [Desulfatibacillum
alkenivorans AK-01]
gi|218762702|gb|ACL05168.1| Carbamoyl phosphate synthetase, small subunit [Desulfatibacillum
alkenivorans AK-01]
Length = 376
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G N PV + G +EI++QNH ++VD +LPKG VTHINLND T G+ + L
Sbjct: 287 KFGHRGINQPVKYLPTGAIEITSQNHGFSVDFDSLPKGEAMVTHINLNDNTVEGIRHNKL 346
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S+QYH EASPGP D+ +F++FV LMK
Sbjct: 347 PVFSVQYHPEASPGPHDAHYLFKEFVGLMK 376
>gi|153009013|ref|YP_001370228.1| carbamoyl phosphate synthase small subunit [Ochrobactrum anthropi
ATCC 49188]
gi|226700914|sp|A6WZJ5.1|CARA_OCHA4 RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|151560901|gb|ABS14399.1| carbamoyl-phosphate synthase, small subunit [Ochrobactrum anthropi
ATCC 49188]
Length = 407
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+ VE TH++L DGT GL V
Sbjct: 306 GHHGANHPVKDYTTGKVEIVSMNHGFAVDSDSLPENVEETHVSLFDGTNCGLRVVGKPVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ L++ K
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINLIREKK 395
>gi|170758841|ref|YP_001787168.1| carbamoyl phosphate synthase small subunit [Clostridium botulinum
A3 str. Loch Maree]
gi|169405830|gb|ACA54241.1| carbamoyl-phosphate synthase, small subunit [Clostridium botulinum
A3 str. Loch Maree]
Length = 349
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ +V I++QNH Y VD LPK +EVTH+++NDGT G+ + L
Sbjct: 263 KFGHRGCNHPVKDLEENKVHITSQNHGYFVD--VLPKDMEVTHVSVNDGTIEGMRHKILP 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
+ S+Q+H EA PGP D+D +F +F++
Sbjct: 321 IFSVQFHPEACPGPKDNDYIFDEFMK 346
>gi|389755988|ref|ZP_10191329.1| carbamoyl phosphate synthase small subunit [Rhodanobacter sp. 115]
gi|388432110|gb|EIL89136.1| carbamoyl phosphate synthase small subunit [Rhodanobacter sp. 115]
Length = 258
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 59/92 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ +GRV I++QNH +AVDPATLP V VTH +L DG+ G A
Sbjct: 167 KFGHHGANHPVKDLDDGRVLITSQNHGFAVDPATLPANVRVTHNSLFDGSLQGFALTDRP 226
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
Q H EASPGP D +F F +LM+ +
Sbjct: 227 AFCFQGHPEASPGPHDIGYLFDRFAQLMQEAR 258
>gi|58001210|gb|AAW60104.1| Carbamoyl-phosphate synthase small chain [Gluconobacter oxydans
621H]
Length = 557
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 44/86 (51%), Positives = 60/86 (69%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G N PV +++ GRVEI++QNH +AVD +LP V+VTH++L DG+ G+A +
Sbjct: 460 GHRGANQPVKDVETGRVEITSQNHGFAVDEKSLPADVKVTHVSLFDGSNEGIASTTKDAF 519
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EASPGP DS +F FV +M
Sbjct: 520 SVQYHPEASPGPSDSFYLFERFVAVM 545
>gi|406891325|gb|EKD36980.1| hypothetical protein ACD_75C01303G0002 [uncultured bacterium]
Length = 373
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV ++ G VEI+AQNH + +D +LPKG VE+THINLND + G+ +
Sbjct: 283 KFGHRGGNQPVKDLTTGHVEITAQNHGFCIDVDSLPKGEVEITHINLNDNSLEGMRHTKY 342
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+QYH E +PGP D+ +F F+E+M+
Sbjct: 343 PAFSVQYHPEYAPGPHDALYLFDRFIEMMRK 373
>gi|188587992|ref|YP_001919508.1| carbamoyl phosphate synthase small subunit [Clostridium botulinum
E3 str. Alaska E43]
gi|188498273|gb|ACD51409.1| carbamoyl-phosphate synthase, small subunit [Clostridium botulinum
E3 str. Alaska E43]
Length = 349
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 44/86 (51%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ V I++QNH Y V+ TLP+ VEVTH+N+NDGT GL + L
Sbjct: 263 KFGHRGCNHPVKDLEENIVHITSQNHGYVVE--TLPEDVEVTHVNINDGTVEGLKHKTLP 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
+ S+Q+H EAS GP DS+ +F F++
Sbjct: 321 IYSVQFHPEASAGPKDSEYIFDKFLK 346
>gi|158425262|ref|YP_001526554.1| carbamoyl phosphate synthase small subunit [Azorhizobium
caulinodans ORS 571]
gi|158332151|dbj|BAF89636.1| carbamoyl-phosphate synthase small subunit [Azorhizobium
caulinodans ORS 571]
Length = 401
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI++ NH +AVD +LP + TH++L DG+ AG+A V
Sbjct: 309 GHHGANHPVKDLTTGKVEITSMNHGFAVDRDSLPANAQETHVSLFDGSNAGIALADKPVF 368
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EASPGP DS +F FVELM K A
Sbjct: 369 SVQYHPEASPGPRDSHYLFTRFVELMAKHKTAA 401
>gi|218887458|ref|YP_002436779.1| carbamoyl phosphate synthase small subunit [Desulfovibrio vulgaris
str. 'Miyazaki F']
gi|31563006|sp|Q8KZA0.1|CARA_DESVM RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|22450194|dbj|BAC10584.1| carbamoyl phophate synthetase small subunit [Desulfovibrio vulgaris
str. 'Miyazaki F']
gi|218758412|gb|ACL09311.1| carbamoyl-phosphate synthase, small subunit [Desulfovibrio vulgaris
str. 'Miyazaki F']
Length = 376
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ G +EIS+QNH + VD ++P VE+TH+NLNDGT G A+
Sbjct: 284 KFGHHGCNHPVKDLVTGHIEISSQNHGFCVDIESVPD-VEITHVNLNDGTLEGFAHKTRP 342
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++++Q+H EASPGP DS F F +++
Sbjct: 343 ILAVQHHPEASPGPTDSRYFFARFRGMVR 371
>gi|328946948|ref|YP_004364285.1| carbamoyl-phosphate synthase small subunit [Treponema
succinifaciens DSM 2489]
gi|328447272|gb|AEB12988.1| carbamoyl-phosphate synthase, small subunit [Treponema
succinifaciens DSM 2489]
Length = 439
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 44/93 (47%), Positives = 58/93 (62%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K+GH G N PV + GRV IS+QNH YAV TLPK ++ +N NDGTC G+ Y +
Sbjct: 315 KYGHRGANQPVKYLATGRVYISSQNHGYAVKNDTLPKNAVLSFVNTNDGTCEGITYTKIP 374
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKY 93
S+Q+H EA GP D+ +F DFV L+ + Y
Sbjct: 375 AFSVQFHPEACSGPLDTGFLFDDFVRLINNHDY 407
>gi|269836966|ref|YP_003319194.1| carbamoyl-phosphate synthase small subunit [Sphaerobacter
thermophilus DSM 20745]
gi|269786229|gb|ACZ38372.1| carbamoyl-phosphate synthase, small subunit [Sphaerobacter
thermophilus DSM 20745]
Length = 386
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP--KGVEVTHINLNDGTCAGLAYPA 58
KFGH GGNHPV ++Q G V I++QNH Y VD ++P +G V+ ++LNDGT GL + +
Sbjct: 275 KFGHRGGNHPVKDLQTGVVRITSQNHGYYVDAGSVPVAQGWRVSQVSLNDGTVEGLEHVS 334
Query: 59 LNVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
L S+QYH E SPGP DS VF F++ +++ R
Sbjct: 335 LPFFSIQYHPEGSPGPLDSQGVFDRFLDRVRAAGSR 370
>gi|336324148|ref|YP_004604115.1| carbamoyl-phosphate synthase small subunit [Flexistipes
sinusarabici DSM 4947]
gi|336107729|gb|AEI15547.1| carbamoyl-phosphate synthase, small subunit [Flexistipes
sinusarabici DSM 4947]
Length = 376
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 64/93 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGN PV ++ G+VEI+AQNH +AVD +L VE+TH+NLND T G+
Sbjct: 283 KFGHHGGNQPVKDMTTGKVEITAQNHCFAVDVESLKDKVEITHVNLNDKTVEGIKLKNNP 342
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKY 93
V ++QYH E PGP D+ +F F+++++S ++
Sbjct: 343 VFAVQYHPENGPGPHDAKYLFTRFLDMVQSARH 375
>gi|395786664|ref|ZP_10466391.1| carbamoyl-phosphate synthase small chain [Bartonella tamiae Th239]
gi|423716442|ref|ZP_17690632.1| carbamoyl-phosphate synthase small chain [Bartonella tamiae Th307]
gi|395422962|gb|EJF89158.1| carbamoyl-phosphate synthase small chain [Bartonella tamiae Th239]
gi|395429371|gb|EJF95439.1| carbamoyl-phosphate synthase small chain [Bartonella tamiae Th307]
Length = 398
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/93 (50%), Positives = 63/93 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD TLPKGVE TH++L DGT G+ V
Sbjct: 306 GHHGANHPVKDFTTGKVEIVSMNHGFAVDSNTLPKGVEETHVSLFDGTNCGIRLTDKPVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +F+ F +++++ K A
Sbjct: 366 SVQHHPEASPGPQDSHYLFQRFGDMIRAHKKTA 398
>gi|251778985|ref|ZP_04821905.1| carbamoyl-phosphate synthase, small subunit [Clostridium botulinum
E1 str. 'BoNT E Beluga']
gi|243083300|gb|EES49190.1| carbamoyl-phosphate synthase, small subunit [Clostridium botulinum
E1 str. 'BoNT E Beluga']
Length = 349
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/86 (51%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ V I++QNH Y V+ TLP+ VEVTH+N+NDGT GL + L
Sbjct: 263 KFGHRGCNHPVKDLEGNIVHITSQNHGYVVE--TLPEDVEVTHVNINDGTVEGLKHKTLP 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
+ S+Q+H EAS GP DS+ +F F++
Sbjct: 321 IYSVQFHPEASAGPKDSEYIFDKFLK 346
>gi|187933326|ref|YP_001884324.1| carbamoyl phosphate synthase small subunit [Clostridium botulinum B
str. Eklund 17B]
gi|187721479|gb|ACD22700.1| carbamoyl-phosphate synthase, small subunit [Clostridium botulinum
B str. Eklund 17B]
Length = 349
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/86 (51%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ V I++QNH Y V+ TLP+ VEVTH+N+NDGT GL + L
Sbjct: 263 KFGHRGCNHPVKDLEENIVHITSQNHGYVVE--TLPEDVEVTHVNINDGTVEGLKHKTLP 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
+ S+Q+H EAS GP DS+ +F F++
Sbjct: 321 IYSVQFHPEASAGPKDSEYIFDKFLK 346
>gi|428203163|ref|YP_007081752.1| carbamoyl-phosphate synthase small subunit [Pleurocapsa sp. PCC
7327]
gi|427980595|gb|AFY78195.1| carbamoyl-phosphate synthase, small subunit [Pleurocapsa sp. PCC
7327]
Length = 385
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P Q +VEI++QNH +AV TL VE+TH+NLND T AGL + +L
Sbjct: 290 KFGHRGLNQPAGLCQ--QVEITSQNHGFAVSADTLNPEVEITHLNLNDRTVAGLRHKSLP 347
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EASPGP D+D +F FV+LMK + R+
Sbjct: 348 FFSVQYHPEASPGPHDADYLFEQFVKLMKEKRARS 382
>gi|323489516|ref|ZP_08094743.1| carbamoylphosphate synthase small subunit [Planococcus donghaensis
MPA1U2]
gi|323396647|gb|EGA89466.1| carbamoylphosphate synthase small subunit [Planococcus donghaensis
MPA1U2]
Length = 365
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 7/96 (7%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLA---Y 56
KFGH GGNHPV ++ G++EI++QNH YAVD TL ++VTH LNDGT GLA Y
Sbjct: 267 KFGHRGGNHPVRDLVTGKIEITSQNHGYAVDEDTLQGTRLKVTHSALNDGTNEGLAHLDY 326
Query: 57 PALNVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
PA V QYH E+SPGP+DS+ +F F+++M + +
Sbjct: 327 PAFTV---QYHPESSPGPEDSNYLFDRFIDVMNATR 359
>gi|161898751|ref|YP_190760.2| carbamoyl phosphate synthase small subunit [Gluconobacter oxydans
621H]
Length = 389
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/86 (51%), Positives = 60/86 (69%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G N PV +++ GRVEI++QNH +AVD +LP V+VTH++L DG+ G+A +
Sbjct: 292 GHRGANQPVKDVETGRVEITSQNHGFAVDEKSLPADVKVTHVSLFDGSNEGIASTTKDAF 351
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EASPGP DS +F FV +M
Sbjct: 352 SVQYHPEASPGPSDSFYLFERFVAVM 377
>gi|428308941|ref|YP_007119918.1| carbamoyl-phosphate synthase small subunit [Microcoleus sp. PCC
7113]
gi|428250553|gb|AFZ16512.1| carbamoyl-phosphate synthase small subunit [Microcoleus sp. PCC
7113]
Length = 385
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHP +Q +VEI++QNH +A++ TL VE+TH+NLND T AGL + +L
Sbjct: 290 KFGHRGLNHPA-GLQR-QVEITSQNHGFAINADTLDAEVEITHLNLNDRTVAGLRHKSLP 347
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+QYH EASPGP D+D +F FV+ M+S
Sbjct: 348 FFSVQYHPEASPGPHDADYLFEQFVQTMRS 377
>gi|404318736|ref|ZP_10966669.1| carbamoyl phosphate synthase small subunit [Ochrobactrum anthropi
CTS-325]
Length = 407
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+ VE TH++L DGT GL V
Sbjct: 306 GHHGANHPVKDYTTGKVEIVSMNHGFAVDSDSLPENVEETHVSLFDGTNCGLRVVGKPVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ L++ K
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINLIREKK 395
>gi|194335378|ref|YP_002017172.1| carbamoyl phosphate synthase small subunit [Pelodictyon
phaeoclathratiforme BU-1]
gi|194307855|gb|ACF42555.1| carbamoyl-phosphate synthase, small subunit [Pelodictyon
phaeoclathratiforme BU-1]
Length = 367
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 62/88 (70%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N+ + ++EI++QNH +AV+ +LP +E+TH+NL D T G+ + L
Sbjct: 277 KFGHHGSNHPVKNLASNQIEITSQNHGFAVEMESLPDELEMTHLNLYDNTVEGVKHRHLP 336
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EA+PGP DS +F +F LM
Sbjct: 337 CFSVQYHPEAAPGPHDSHYLFAEFTSLM 364
>gi|115378616|ref|ZP_01465768.1| carbamoyl-phosphate synthase small chain [Stigmatella aurantiaca
DW4/3-1]
gi|115364366|gb|EAU63449.1| carbamoyl-phosphate synthase small chain [Stigmatella aurantiaca
DW4/3-1]
Length = 398
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/77 (57%), Positives = 54/77 (70%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV ++ G+VEI+AQNH +AVD A+L VTHINLNDGT GL+ P
Sbjct: 132 KFGHRGANQPVKDLTTGKVEITAQNHGFAVDDASLKGKAVVTHINLNDGTVEGLSIPDAR 191
Query: 61 VMSLQYHLEASPGPDDS 77
S+QYH E+SPGP D+
Sbjct: 192 AFSVQYHPESSPGPHDA 208
>gi|344207280|ref|YP_004792421.1| carbamoyl-phosphate synthase small subunit [Stenotrophomonas
maltophilia JV3]
gi|343778642|gb|AEM51195.1| carbamoyl-phosphate synthase, small subunit [Stenotrophomonas
maltophilia JV3]
Length = 439
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 59/90 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ +GRV I++QNH +A+D ATLP + VTH +L DGT G+A +
Sbjct: 349 GHHGANHPVQDLDSGRVMITSQNHGFAIDEATLPATLRVTHRSLFDGTNQGVARTDVPAF 408
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D +F FV LM+ K
Sbjct: 409 SFQGHPEASPGPTDVGPLFDRFVVLMEQAK 438
>gi|153939094|ref|YP_001391100.1| carbamoyl phosphate synthase small subunit [Clostridium botulinum F
str. Langeland]
gi|384462126|ref|YP_005674721.1| carbamoyl-phosphate synthase small subunit [Clostridium botulinum F
str. 230613]
gi|152934990|gb|ABS40488.1| carbamoyl-phosphate synthase, small subunit [Clostridium botulinum
F str. Langeland]
gi|295319143|gb|ADF99520.1| carbamoyl-phosphate synthase, small subunit [Clostridium botulinum
F str. 230613]
Length = 349
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/86 (50%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ +V I++QNH Y VD LPK +EVTHI++NDGT G+ + L+
Sbjct: 263 KFGHRGCNHPVKDLKENKVHITSQNHGYFVD--VLPKDMEVTHISVNDGTIEGMKHKNLS 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
+ S+Q+H EA PG DSD +F +F++
Sbjct: 321 IFSVQFHPEACPGSKDSDYIFDEFMK 346
>gi|429220510|ref|YP_007182154.1| carbamoyl-phosphate synthase small subunit [Deinococcus
peraridilitoris DSM 19664]
gi|429131373|gb|AFZ68388.1| carbamoyl-phosphate synthase, small subunit [Deinococcus
peraridilitoris DSM 19664]
Length = 394
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEV-THINLNDGTCAGLAYPAL 59
KFGH GGN PV N+ G +EI++QNH YAVD ++P+G V TH+NLND + G+A+
Sbjct: 285 KFGHRGGNQPVKNLLTGEIEITSQNHGYAVDIDSIPEGQFVATHVNLNDNSLEGMAHVRY 344
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVE 86
V S+QYH EASPGP DS +F F+E
Sbjct: 345 PVFSVQYHPEASPGPHDSRYLFNRFIE 371
>gi|315226610|ref|ZP_07868398.1| carbamoyl-phosphate synthase, small subunit [Parascardovia
denticolens DSM 10105 = JCM 12538]
gi|315120742|gb|EFT83874.1| carbamoyl-phosphate synthase, small subunit [Parascardovia
denticolens DSM 10105 = JCM 12538]
Length = 382
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ GRVEI+ QNH +AVD +L +E+THI+LNDG C G+ +
Sbjct: 270 KFGHRGSNHPVKNLATGRVEITTQNHGFAVDKDSLAGTDLELTHISLNDGACEGVRNTTV 329
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKY 93
S+QYH EA+ GP DS+ +F F++LM S +
Sbjct: 330 PAFSVQYHPEANGGPHDSNYLFDQFMDLMDSASH 363
>gi|424668600|ref|ZP_18105625.1| carbamoyl-phosphate synthase small chain [Stenotrophomonas
maltophilia Ab55555]
gi|401068862|gb|EJP77386.1| carbamoyl-phosphate synthase small chain [Stenotrophomonas
maltophilia Ab55555]
Length = 439
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 59/90 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ +GRV I++QNH +A+D ATLP + VTH +L DGT G+A +
Sbjct: 349 GHHGANHPVQDLDSGRVMITSQNHGFAIDEATLPPTLRVTHRSLFDGTNQGVARTDVPAF 408
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D +F FV LM+ K
Sbjct: 409 SFQGHPEASPGPTDVSPLFDRFVVLMEQAK 438
>gi|189347772|ref|YP_001944301.1| carbamoyl phosphate synthase small subunit [Chlorobium limicola DSM
245]
gi|189341919|gb|ACD91322.1| carbamoyl-phosphate synthase, small subunit [Chlorobium limicola
DSM 245]
Length = 369
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 64/92 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N+ + ++EI++QNH +AV +LP+ +E+TH+NL D T G+ + +L
Sbjct: 277 KFGHHGSNHPVKNLDSNKIEITSQNHGFAVKMDSLPEDLEMTHLNLYDQTVEGVRHRSLP 336
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EA+PGP DS +F F ++M K
Sbjct: 337 CFSVQYHPEAAPGPHDSHYLFDLFTDMMDRAK 368
>gi|255528293|ref|ZP_05395106.1| carbamoyl-phosphate synthase, small subunit [Clostridium
carboxidivorans P7]
gi|255508011|gb|EET84438.1| carbamoyl-phosphate synthase, small subunit [Clostridium
carboxidivorans P7]
Length = 349
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ +V I++QNH Y VD LP+ +EVTH+++NDGT G+ + +L
Sbjct: 263 KFGHRGCNHPVKDLEENKVHITSQNHGYYVD--MLPQDMEVTHVSVNDGTIEGMKHKSLP 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
+ S+Q+H EA PGP DSD +F F++
Sbjct: 321 IFSVQFHPEACPGPKDSDYIFDRFMK 346
>gi|333986650|ref|YP_004519257.1| carbamoyl-phosphate synthase small subunit [Methanobacterium sp.
SWAN-1]
gi|333824794|gb|AEG17456.1| carbamoyl-phosphate synthase, small subunit [Methanobacterium sp.
SWAN-1]
Length = 360
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/93 (47%), Positives = 66/93 (70%), Gaps = 5/93 (5%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPAT---LPKGVEVTHINLNDGTCAGLAYP 57
KFGH G N PV ++++G+V I+AQNH + +DP + LP ++VT INLNDGT G+ +
Sbjct: 269 KFGHRGINQPVKDLRSGKVSITAQNHGFTIDPESCRDLP--IKVTQINLNDGTIEGIEHE 326
Query: 58 ALNVMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
L + S+QYH EA PGP+D+D F +F++ ++S
Sbjct: 327 ELPISSVQYHPEAGPGPNDTDYYFDNFIKALES 359
>gi|15966073|ref|NP_386426.1| carbamoyl phosphate synthase small subunit [Sinorhizobium meliloti
1021]
gi|384530206|ref|YP_005714294.1| carbamoyl-phosphate synthase small subunit [Sinorhizobium meliloti
BL225C]
gi|384535313|ref|YP_005719398.1| carbamoyl-phosphate synthase small subunit [Sinorhizobium meliloti
SM11]
gi|407721380|ref|YP_006841042.1| carbamoyl-phosphate synthase small subunit [Sinorhizobium meliloti
Rm41]
gi|433614146|ref|YP_007190944.1| carbamoyl-phosphate synthase, small subunit [Sinorhizobium meliloti
GR4]
gi|21759039|sp|Q92N95.1|CARA_RHIME RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|15075343|emb|CAC46899.1| Probable carbamoyl-phosphate synthetase, glutamine-hydrolyzing
protein [Sinorhizobium meliloti 1021]
gi|333812382|gb|AEG05051.1| carbamoyl-phosphate synthase, small subunit [Sinorhizobium meliloti
BL225C]
gi|336032205|gb|AEH78137.1| carbamoyl-phosphate synthase small chain [Sinorhizobium meliloti
SM11]
gi|407319612|emb|CCM68216.1| Carbamoyl-phosphate synthase small chain [Sinorhizobium meliloti
Rm41]
gi|429552336|gb|AGA07345.1| carbamoyl-phosphate synthase, small subunit [Sinorhizobium meliloti
GR4]
Length = 401
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 61/90 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+GVE THI+L DGT GL V
Sbjct: 304 GHHGANHPVKDHTTGKVEIVSMNHGFAVDANSLPQGVEQTHISLFDGTNCGLRVDGRPVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ L++ K
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFLNLIREKK 393
>gi|289435179|ref|YP_003465051.1| carbamoyl-phosphate synthase small subunit [Listeria seeligeri
serovar 1/2b str. SLCC3954]
gi|289171423|emb|CBH27967.1| carbamoyl-phosphate synthase small chain [Listeria seeligeri
serovar 1/2b str. SLCC3954]
Length = 363
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV + GRV+ +AQNH YAVD A+L ++VTHI LND T GLA+
Sbjct: 265 KFGHRGANHPVKELATGRVDFTAQNHGYAVDKASLVDTDLKVTHIELNDETVEGLAHKEY 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
++QYH EA+PGP D + +F +F+E+M
Sbjct: 325 QAYTVQYHPEANPGPSDVNYLFDEFMEMM 353
>gi|297180874|gb|ADI17079.1| carbamoylphosphate synthase small subunit [uncultured alpha
proteobacterium HF0010_30A23]
Length = 429
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/88 (50%), Positives = 60/88 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH GGNHPV ++ G+VEI++QNH +AV+ +LP VE TH++L DGT G+
Sbjct: 342 GHRGGNHPVKDLTTGKVEITSQNHGFAVELESLPGDVEATHVSLFDGTNEGIRSTRFPAF 401
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+QYH EASPGP DS +F F+E+M +
Sbjct: 402 SVQYHPEASPGPHDSHYLFDRFMEMMDA 429
>gi|418403193|ref|ZP_12976689.1| carbamoyl phosphate synthase small subunit [Sinorhizobium meliloti
CCNWSX0020]
gi|359502877|gb|EHK75443.1| carbamoyl phosphate synthase small subunit [Sinorhizobium meliloti
CCNWSX0020]
Length = 401
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 61/90 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+GVE THI+L DGT GL V
Sbjct: 304 GHHGANHPVKDHTTGKVEIVSMNHGFAVDANSLPQGVEQTHISLFDGTNCGLRVDGRPVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ L++ K
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFLNLIREKK 393
>gi|218515156|ref|ZP_03511996.1| carbamoyl phosphate synthase small subunit [Rhizobium etli 8C-3]
Length = 98
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE THI+L DGT GL V
Sbjct: 1 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSKSLPDGVEETHISLFDGTNCGLRVLGKQVF 60
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ +++ K
Sbjct: 61 SVQHHPEASPGPQDSHYLFRRFINMVREKK 90
>gi|227822814|ref|YP_002826786.1| carbamoyl phosphate synthase small subunit [Sinorhizobium fredii
NGR234]
gi|227341815|gb|ACP26033.1| carbamoyl-phosphate synthase small chain [Sinorhizobium fredii
NGR234]
Length = 401
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 61/90 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+GVE THI+L DGT GL V
Sbjct: 304 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSKSLPEGVEETHISLFDGTNCGLRVNGKPVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ L++ K
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFLNLIREKK 393
>gi|420236858|ref|ZP_14741335.1| carbamoyl phosphate synthase small subunit [Parascardovia
denticolens IPLA 20019]
gi|391879961|gb|EIT88461.1| carbamoyl phosphate synthase small subunit [Parascardovia
denticolens IPLA 20019]
Length = 376
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ GRVEI+ QNH +AVD +L +E+THI+LNDG C G+ +
Sbjct: 264 KFGHRGSNHPVKNLATGRVEITTQNHGFAVDKDSLAGTDLELTHISLNDGACEGVRNTTV 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKY 93
S+QYH EA+ GP DS+ +F F++LM S +
Sbjct: 324 PAFSVQYHPEANGGPHDSNYLFDQFMDLMDSASH 357
>gi|329769962|ref|ZP_08261360.1| carbamoyl-phosphate synthase small subunit [Gemella sanguinis M325]
gi|328837566|gb|EGF87192.1| carbamoyl-phosphate synthase small subunit [Gemella sanguinis M325]
Length = 364
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/93 (47%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ G+V+I++QNH Y+VD +L +E+TH+++ND TC G+ +
Sbjct: 267 KFGHRGANHPVKNLLTGKVDITSQNHGYSVDIESLKDTDLELTHLSVNDKTCEGVRHKKY 326
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V ++QYH EASPGP D + +F F++ MK+ K
Sbjct: 327 PVFTVQYHPEASPGPHDPNYLFDQFIDNMKTFK 359
>gi|239906668|ref|YP_002953409.1| carbamoyl phosphate synthase small subunit [Desulfovibrio
magneticus RS-1]
gi|259585674|sp|C4XRH8.1|CARA_DESMR RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|239796534|dbj|BAH75523.1| carbamoyl-phosphate synthase small chain [Desulfovibrio magneticus
RS-1]
Length = 375
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++Q GR+EIS+QNH + VD +L VE+TH+NLND T G A+
Sbjct: 283 KFGHHGLNHPVKDLQTGRIEISSQNHGFCVDIESLSD-VELTHVNLNDNTLEGFAHKKKP 341
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V+++QYH EA+PGP DS F F L++
Sbjct: 342 VIAIQYHPEAAPGPHDSRYFFSRFRNLVR 370
>gi|78776281|ref|YP_392596.1| carbamoyl phosphate synthase small subunit [Sulfurimonas
denitrificans DSM 1251]
gi|78496821|gb|ABB43361.1| carbamoyl-phosphate synthase small subunit [Sulfurimonas
denitrificans DSM 1251]
Length = 381
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGN PV N++ G VEI+AQNHNY V P + + EVTH NL D T GL Y
Sbjct: 293 KFGHHGGNQPVKNMRTGLVEITAQNHNYNV-PDNIVEVAEVTHTNLFDNTIEGLKYNDSP 351
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+Q+H E+SPGP +S +F +F+ L+K
Sbjct: 352 IFSVQHHPESSPGPKESRYIFNEFLSLIK 380
>gi|403745304|ref|ZP_10954242.1| carbamoyl-phosphate synthase, small subunit [Alicyclobacillus
hesperidum URH17-3-68]
gi|403121532|gb|EJY55825.1| carbamoyl-phosphate synthase, small subunit [Alicyclobacillus
hesperidum URH17-3-68]
Length = 368
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ GRV+I++QNH Y VD +L +++TH+NLNDGT GLA+
Sbjct: 269 KFGHRGANHPVKDLRTGRVDITSQNHGYMVDADSLAGTPLQLTHVNLNDGTVEGLAHKQE 328
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+QYH E+ PGP D+ +F +F++++ V+
Sbjct: 329 PVFSVQYHPESRPGPTDARYLFDNFMDMISQVR 361
>gi|312897592|ref|ZP_07757009.1| carbamoyl-phosphate synthase, small subunit [Megasphaera
micronuciformis F0359]
gi|310621225|gb|EFQ04768.1| carbamoyl-phosphate synthase, small subunit [Megasphaera
micronuciformis F0359]
Length = 352
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/88 (50%), Positives = 59/88 (67%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGH G NHPV + Q+GRV I++QNH Y +D TLP +TH NL+D T G A P +
Sbjct: 263 FGHRGSNHPVKDQQSGRVYITSQNHGYIIDEKTLPPEAIITHRNLHDNTLEGFAIPEKQM 322
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMK 89
+QYH EASPGP D+ +F+ FV++M+
Sbjct: 323 FCVQYHPEASPGPTDNLYLFKQFVKMME 350
>gi|217970146|ref|YP_002355380.1| carbamoyl phosphate synthase small subunit [Thauera sp. MZ1T]
gi|217507473|gb|ACK54484.1| carbamoyl-phosphate synthase, small subunit [Thauera sp. MZ1T]
Length = 380
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 62/90 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+V I++QNH +AVDPAT+P ++VTH++L DGT G+A +
Sbjct: 291 GHHGANHPVKDLDTGKVLITSQNHGFAVDPATMPANLKVTHVSLFDGTNQGIARTDVPAF 350
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D +F F+ LM++ K
Sbjct: 351 SFQGHPEASPGPHDVAYLFDRFIGLMEAAK 380
>gi|424896173|ref|ZP_18319747.1| carbamoyl-phosphate synthase, small subunit [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|393180400|gb|EJC80439.1| carbamoyl-phosphate synthase, small subunit [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 403
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE THI+L DGT GL V
Sbjct: 306 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSKSLPDGVEETHISLFDGTNCGLRVLGKQVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ +++ K
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINMVREKK 395
>gi|340752015|ref|ZP_08688825.1| carbamoyl-phosphate synthase, small subunit [Fusobacterium
mortiferum ATCC 9817]
gi|229420982|gb|EEO36029.1| carbamoyl-phosphate synthase, small subunit [Fusobacterium
mortiferum ATCC 9817]
Length = 351
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/89 (47%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K+GH G NHPV ++ ++ I++QNH Y VD +P+ +EVTHINLND + G+ L
Sbjct: 263 KYGHRGCNHPVKDLIKNKIFITSQNHGYVVD--RVPEAMEVTHINLNDNSIEGMRSKDLR 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+M +QYH EA PGP DSD +F DF+++++
Sbjct: 321 IMCVQYHPEAWPGPSDSDYLFDDFLDVIE 349
>gi|154484781|ref|ZP_02027229.1| hypothetical protein EUBVEN_02499 [Eubacterium ventriosum ATCC
27560]
gi|149734629|gb|EDM50546.1| carbamoyl-phosphate synthase, small subunit [Eubacterium ventriosum
ATCC 27560]
Length = 359
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 45/93 (48%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
K+GH GGNHPV ++ +G V IS+QNH Y VD T+ P+ EV IN+ND T GL Y
Sbjct: 265 KYGHRGGNHPVKDLASGHVYISSQNHGYMVDGETVNPEVAEVAFINVNDKTVEGLRYKNK 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
++ ++Q+H EA PGP DSD +F +F+++M+ K
Sbjct: 325 SIFTVQFHPEACPGPQDSDRLFDEFIQMMEVKK 357
>gi|424885368|ref|ZP_18308979.1| carbamoyl-phosphate synthase, small subunit [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393177130|gb|EJC77171.1| carbamoyl-phosphate synthase, small subunit [Rhizobium
leguminosarum bv. trifolii WSM2012]
Length = 403
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE THI+L DGT GL V
Sbjct: 306 GHHGANHPVKDHTTGKVEIVSMNHGFAVDSKSLPDGVEETHISLFDGTNCGLRVLGKQVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F+ +++ K
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINMVREKK 395
>gi|323137631|ref|ZP_08072708.1| carbamoyl-phosphate synthase, small subunit [Methylocystis sp. ATCC
49242]
gi|322397257|gb|EFX99781.1| carbamoyl-phosphate synthase, small subunit [Methylocystis sp. ATCC
49242]
Length = 396
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 58/90 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD TLP+ TH +L DG+ G+A
Sbjct: 305 GHHGANHPVKDFTTGKVEIVSMNHGFAVDRDTLPENAVETHRSLFDGSNCGIALTDRPAF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR FVELMK K
Sbjct: 365 SVQHHPEASPGPQDSHYLFRRFVELMKEAK 394
>gi|218290463|ref|ZP_03494583.1| carbamoyl-phosphate synthase, small subunit [Alicyclobacillus
acidocaldarius LAA1]
gi|218239484|gb|EED06679.1| carbamoyl-phosphate synthase, small subunit [Alicyclobacillus
acidocaldarius LAA1]
Length = 368
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ GRV+I++QNH Y VD +L +E+TH+NLNDGT GL +
Sbjct: 269 KFGHRGANHPVKDLRTGRVDITSQNHGYVVDADSLQGTPLELTHVNLNDGTVEGLVHRHE 328
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V +QYH E+ PGP D+ +F +F++LM V+
Sbjct: 329 PVFCVQYHPESRPGPSDARYLFDEFIDLMTRVR 361
>gi|46581516|ref|YP_012324.1| carbamoyl phosphate synthase small subunit [Desulfovibrio vulgaris
str. Hildenborough]
gi|120601319|ref|YP_965719.1| carbamoyl phosphate synthase small subunit [Desulfovibrio vulgaris
DP4]
gi|387154721|ref|YP_005703657.1| carbamoyl-phosphate synthase small subunit [Desulfovibrio vulgaris
RCH1]
gi|81404035|sp|Q726J4.1|CARA_DESVH RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|226700907|sp|A1VA26.1|CARA_DESVV RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|46450938|gb|AAS97584.1| carbamoyl-phosphate synthase, small subunit [Desulfovibrio vulgaris
str. Hildenborough]
gi|120561548|gb|ABM27292.1| carbamoyl-phosphate synthase small subunit [Desulfovibrio vulgaris
DP4]
gi|311235165|gb|ADP88019.1| carbamoyl-phosphate synthase, small subunit [Desulfovibrio vulgaris
RCH1]
Length = 375
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ GR+EIS+QNH + VD +L VE+TH+NLNDGT G A+
Sbjct: 283 KFGHHGCNHPVKDLTTGRIEISSQNHGFCVDIDSLTD-VEITHVNLNDGTLEGFAHKTKP 341
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V+++Q+H EASPGP+DS F F +++
Sbjct: 342 VIAVQHHPEASPGPNDSRYFFARFRNMVR 370
>gi|56478161|ref|YP_159750.1| carbamoyl phosphate synthase small subunit [Aromatoleum aromaticum
EbN1]
gi|56314204|emb|CAI08849.1| Carbamoyl-phosphate synthase small chain [Aromatoleum aromaticum
EbN1]
Length = 381
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 62/90 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++++G+V I++QNH +AVDP TLP V TH++L DG+ GLA+ +
Sbjct: 289 KFGHHGANHPVKDLESGQVLITSQNHGFAVDPDTLPGNVRTTHVSLFDGSLQGLAWNDVP 348
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
Q H EASPGP D +F F+ ++++
Sbjct: 349 AFCFQGHPEASPGPHDVSYLFDRFIRMLET 378
>gi|254780420|ref|YP_003064833.1| carbamoyl phosphate synthase small subunit [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040097|gb|ACT56893.1| carbamoyl phosphate synthase small subunit [Candidatus Liberibacter
asiaticus str. psy62]
Length = 396
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 58/90 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV NI NG VEI + NH +A+D ++LP G+E THI+L D + G V
Sbjct: 304 GHHGVNHPVKNISNGTVEIVSMNHGFAIDASSLPAGLEETHISLFDSSNCGFRLIDQPVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH E+SPGP DS +F F++ M K
Sbjct: 364 SVQYHPESSPGPQDSYYLFSTFIDFMHKRK 393
>gi|389774843|ref|ZP_10192962.1| carbamoyl-phosphate synthase small subunit [Rhodanobacter
spathiphylli B39]
gi|388438442|gb|EIL95197.1| carbamoyl-phosphate synthase small subunit [Rhodanobacter
spathiphylli B39]
Length = 378
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 59/95 (62%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV + +GRV I++QNH +AVDPATLP V VTH +L DG+ G A
Sbjct: 284 KFGHHGANHPVKDHDDGRVLITSQNHGFAVDPATLPANVRVTHTSLFDGSLQGFALTDRP 343
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
Q H EASPGP D +F+ F LM+ + A
Sbjct: 344 AFCFQGHPEASPGPLDVGYLFQRFATLMQEARTHA 378
>gi|386285587|ref|ZP_10062802.1| carbamoyl phosphate synthase small subunit [Sulfurovum sp. AR]
gi|385343698|gb|EIF50419.1| carbamoyl phosphate synthase small subunit [Sulfurovum sp. AR]
Length = 372
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N+ G+VEI+AQNHNY V P + + VTHINL D T GL Y
Sbjct: 286 KFGHHGGNHPVSNVVTGKVEITAQNHNYNV-PDNITEVATVTHINLFDNTIEGLKYNDSP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
MS+Q+H EASPGP +S +F +F +++
Sbjct: 345 TMSVQHHPEASPGPHESAYIFGEFAKML 372
>gi|344199194|ref|YP_004783520.1| carbamoyl-phosphate synthase small subunit [Acidithiobacillus
ferrivorans SS3]
gi|343774638|gb|AEM47194.1| carbamoyl-phosphate synthase, small subunit [Acidithiobacillus
ferrivorans SS3]
Length = 380
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 60/88 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++++GRV I++QNH +AVD TLP + TH +L DG+ G+A+ L
Sbjct: 284 KFGHHGANHPVKDLRSGRVLITSQNHGFAVDADTLPDCLIATHTSLFDGSLQGMAHRDLP 343
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
V S Q H EA PGP D+ +F DFV M
Sbjct: 344 VFSFQGHPEAGPGPHDASVIFDDFVHAM 371
>gi|384228158|ref|YP_005619893.1| carbamoyl phosphate synthase small subunit [Buchnera aphidicola
str. Ua (Uroleucon ambrosiae)]
gi|345539091|gb|AEO07958.1| carbamoyl phosphate synthase small subunit [Buchnera aphidicola
str. Ua (Uroleucon ambrosiae)]
Length = 386
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/88 (48%), Positives = 60/88 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++N RV I++QNH++ VD LP +++TH +L DGT GL+ +
Sbjct: 291 KFGHHGGNHPVKDLKNNRVIITSQNHSFTVDIKNLPNNIKITHTSLFDGTLQGLSLTNRS 350
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
S Q H EASPGP D +F F++L+
Sbjct: 351 AFSFQGHPEASPGPHDGSSLFDHFIQLI 378
>gi|37523112|ref|NP_926489.1| carbamoyl phosphate synthase small subunit [Gloeobacter violaceus
PCC 7421]
gi|35214115|dbj|BAC91484.1| carbamoyl phosphate synthase small subunit [Gloeobacter violaceus
PCC 7421]
Length = 384
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/90 (54%), Positives = 62/90 (68%), Gaps = 3/90 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G N P N RVEI++QNH +AVD A+L +E+TH+NLND T GL + L
Sbjct: 285 KFGHRGLNQPASF--NNRVEITSQNHGFAVDDASLAGANIEITHLNLNDRTVEGLRHREL 342
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S+QYH EASPGP D+D +F FV+LM+
Sbjct: 343 PVFSVQYHPEASPGPHDADYLFAQFVDLMR 372
>gi|258511290|ref|YP_003184724.1| carbamoyl-phosphate synthase small subunit [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478016|gb|ACV58335.1| carbamoyl-phosphate synthase, small subunit [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 368
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ GRV+I++QNH Y VD +L +E+TH+NLNDGT GL +
Sbjct: 269 KFGHRGANHPVKDLRTGRVDITSQNHGYVVDADSLQGTPLELTHVNLNDGTVEGLVHRHE 328
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V +QYH E+ PGP D+ +F +F++LM V+
Sbjct: 329 PVFCVQYHPESRPGPSDARYLFDEFIDLMTRVR 361
>gi|344942524|ref|ZP_08781811.1| carbamoyl-phosphate synthase, small subunit [Methylobacter
tundripaludum SV96]
gi|344259811|gb|EGW20083.1| carbamoyl-phosphate synthase, small subunit [Methylobacter
tundripaludum SV96]
Length = 376
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 59/91 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV I GRV IS+QNH +A + A+LP V T+ +L DG+ G+
Sbjct: 284 KFGHHGANHPVQEIATGRVMISSQNHGFAANEASLPDNVVATYRSLFDGSLQGIKRTDCP 343
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSV 91
MS Q H EASPGP D + +F DF+E+M+ V
Sbjct: 344 AMSFQGHPEASPGPHDVEALFDDFIEMMEQV 374
>gi|300853640|ref|YP_003778624.1| carbamoyl-phosphate synthase small subunit [Clostridium ljungdahlii
DSM 13528]
gi|300433755|gb|ADK13522.1| carbamoyl-phosphate synthase small chain [Clostridium ljungdahlii
DSM 13528]
Length = 349
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/86 (46%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV ++ +G+V I++QNH Y V+ LP+ +E+TH++LNDGT G+ + +L
Sbjct: 263 KFGHRGCNHPVKDLVSGKVHITSQNHGYYVN--RLPEDMEITHVSLNDGTIEGMKHKSLP 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
+ S+Q+H EA PGP+D++ +F +F++
Sbjct: 321 IFSIQFHPEACPGPEDNNYIFDEFMK 346
>gi|384134981|ref|YP_005517695.1| carbamoyl-phosphate synthase small subunit [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
gi|339289066|gb|AEJ43176.1| carbamoyl-phosphate synthase, small subunit [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
Length = 357
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG--VEVTHINLNDGTCAGLAYPA 58
KFGH G NHPV +++ GRV+I++QNH Y VD +L +G +E+TH+NLNDGT GL +
Sbjct: 258 KFGHRGANHPVKDLRTGRVDITSQNHGYVVDADSL-RGTPLELTHVNLNDGTVEGLVHRH 316
Query: 59 LNVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V +QYH E+ PGP D+ +F +F++LM V+
Sbjct: 317 EPVFCVQYHPESRPGPSDARYLFDEFIDLMTRVR 350
>gi|296271781|ref|YP_003654412.1| carbamoyl-phosphate synthase small subunit [Arcobacter nitrofigilis
DSM 7299]
gi|296095956|gb|ADG91906.1| carbamoyl-phosphate synthase, small subunit [Arcobacter
nitrofigilis DSM 7299]
Length = 372
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFG HGGNHPV N NG VEI+AQNHNY V P ++ K EVTH NL D T G+ Y N
Sbjct: 287 KFGQHGGNHPVVN--NGVVEITAQNHNYNV-PDSIVKIAEVTHRNLFDDTIEGVRYNNKN 343
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+ S+Q+H EASPGP DS +F+ F E++K
Sbjct: 344 IYSIQHHPEASPGPHDSKYIFKQFAEMVK 372
>gi|126735435|ref|ZP_01751181.1| carbamoyl-phosphate synthase, small subunit [Roseobacter sp. CCS2]
gi|126715990|gb|EBA12855.1| carbamoyl-phosphate synthase, small subunit [Roseobacter sp. CCS2]
Length = 378
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 60/88 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV +++ G+VEI++ NH + VD TLP GVE TH++L DG+ G+ V
Sbjct: 291 GHHGANHPVKDMETGKVEITSMNHGFTVDSQTLPDGVEETHVSLFDGSNCGIRIANRPVF 350
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+QYH EASPGP DS +F FV+ M +
Sbjct: 351 SVQYHPEASPGPQDSYYLFERFVKAMSA 378
>gi|313205943|ref|YP_004045120.1| carbamoyl-phosphate synthase small subunit [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|383485260|ref|YP_005394172.1| carbamoyl-phosphate synthase small subunit [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|386322073|ref|YP_006018235.1| Carbamoylphosphate synthase small subunit [Riemerella anatipestifer
RA-GD]
gi|416111960|ref|ZP_11592984.1| Carbamoyl-phosphate synthase small chain [Riemerella anatipestifer
RA-YM]
gi|442314868|ref|YP_007356171.1| Carbamoylphosphate synthase small subunit [Riemerella anatipestifer
RA-CH-2]
gi|312445259|gb|ADQ81614.1| carbamoyl-phosphate synthase small subunit [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|315022256|gb|EFT35284.1| Carbamoyl-phosphate synthase small chain [Riemerella anatipestifer
RA-YM]
gi|325336616|gb|ADZ12890.1| Carbamoylphosphate synthase small subunit [Riemerella anatipestifer
RA-GD]
gi|380459945|gb|AFD55629.1| carbamoyl-phosphate synthase small subunit [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|441483791|gb|AGC40477.1| Carbamoylphosphate synthase small subunit [Riemerella anatipestifer
RA-CH-2]
Length = 358
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV +++ +V I++QNH YA+D +L +E THI LND T G+ +
Sbjct: 264 KFGHRGGNHPVLDLRTNKVAITSQNHGYAIDQESLKNTDLEETHIALNDRTNEGVRHKKY 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP+D++ +F +FVE+MK K
Sbjct: 324 PCFSVQYHPEASPGPEDANYLFDEFVEMMKEWK 356
>gi|126656809|ref|ZP_01728023.1| carbamoyl-phosphate synthase small subunit [Cyanothece sp. CCY0110]
gi|126622029|gb|EAZ92737.1| carbamoyl-phosphate synthase small subunit [Cyanothece sp. CCY0110]
Length = 381
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P Q +VEI++QNH +AV +L VE+TH+NLND T AGL++ +L
Sbjct: 290 KFGHRGLNQPCGLQQ--KVEITSQNHGFAVTEKSLDAEVEITHLNLNDRTVAGLSHKSLP 347
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+D +F FV++MK K
Sbjct: 348 FFSVQYHPEASPGPHDADYLFEKFVKMMKENK 379
>gi|358062832|ref|ZP_09149469.1| carbamoyl-phosphate synthase, small subunit [Clostridium hathewayi
WAL-18680]
gi|356698966|gb|EHI60489.1| carbamoyl-phosphate synthase, small subunit [Clostridium hathewayi
WAL-18680]
Length = 381
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
K+GH GGNHPV +++ GRV IS+QNH YAVD +L PK +N+NDGT GL Y
Sbjct: 289 KYGHRGGNHPVKDLETGRVYISSQNHGYAVDMDSLDPKVAVPAFVNVNDGTNEGLKYTGK 348
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
N+ ++QYH EA PGP DS +F F+ +M+
Sbjct: 349 NIFTVQYHPEACPGPQDSSYLFDRFLNMME 378
>gi|317496519|ref|ZP_07954868.1| carbamoyl-phosphate synthase [Gemella morbillorum M424]
gi|316913322|gb|EFV34819.1| carbamoyl-phosphate synthase [Gemella morbillorum M424]
Length = 363
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/93 (47%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ G+V+I++QNH Y+VD +L +E+TH+++ND TC G+ +
Sbjct: 267 KFGHRGANHPVKNLLTGKVDITSQNHGYSVDIDSLKDTELELTHLSVNDKTCEGVRHKKY 326
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+QYH EASPGP D + +F F++ M+ K
Sbjct: 327 PVFSVQYHPEASPGPHDPNYLFDQFIDNMREFK 359
>gi|429108831|ref|ZP_19170601.1| Carbamoyl-phosphate synthase small chain [Cronobacter malonaticus
507]
gi|426309988|emb|CCJ96714.1| Carbamoyl-phosphate synthase small chain [Cronobacter malonaticus
507]
Length = 99
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N RV I+AQNH +AVD AT+P + VTH +L D T G+
Sbjct: 4 KFGHHGGNHPVKDIDNNRVMITAQNHGFAVDEATMPSTLRVTHKSLFDNTLQGIHRTDKP 63
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 64 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 98
>gi|187477422|ref|YP_785446.1| carbamoyl phosphate synthase small subunit, partial [Bordetella
avium 197N]
gi|115422008|emb|CAJ48530.1| carbamoyl-phosphate synthase small chain [Bordetella avium 197N]
Length = 384
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/92 (51%), Positives = 56/92 (60%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K GHHG NHPV ++Q+GRV I++QNH +AVD ATLP VTHI+L DGT G
Sbjct: 293 KTGHHGANHPVQDVQSGRVFITSQNHGFAVDAATLPANTRVTHISLFDGTLQGFELTDRP 352
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
Q H EASPGP D +F F+ LM K
Sbjct: 353 AFCFQGHPEASPGPHDIIVLFDKFISLMAGQK 384
>gi|13472256|ref|NP_103823.1| carbamoyl phosphate synthase small subunit [Mesorhizobium loti
MAFF303099]
gi|21759044|sp|Q98IA7.1|CARA_RHILO RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|14023001|dbj|BAB49609.1| carbamoyl-phosphate synthetase small subunit [Mesorhizobium loti
MAFF303099]
Length = 398
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 62/90 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+GVE TH++L DG+ G+A V
Sbjct: 300 GHHGANHPVKDHTTGKVEIVSMNHGFAVDADSLPEGVEETHVSLFDGSNCGIALTGRPVF 359
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR FV L++ +
Sbjct: 360 SVQHHPEASPGPQDSHYLFRRFVNLIREKR 389
>gi|298292329|ref|YP_003694268.1| carbamoyl-phosphate synthase small subunit [Starkeya novella DSM
506]
gi|296928840|gb|ADH89649.1| carbamoyl-phosphate synthase, small subunit [Starkeya novella DSM
506]
Length = 400
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 61/90 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI++ NH +AVD +LP E TH++L DG+ AG+A V
Sbjct: 309 GHHGANHPVKDMTTGKVEITSMNHGFAVDRDSLPATAEETHVSLFDGSNAGIALTDRPVF 368
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F FVE++ K
Sbjct: 369 SVQYHPEASPGPQDSHYLFDRFVEMIAKNK 398
>gi|206900170|ref|YP_002251485.1| carbamoyl-phosphate synthase, small subunit [Dictyoglomus
thermophilum H-6-12]
gi|206739273|gb|ACI18331.1| carbamoyl-phosphate synthase, small subunit [Dictyoglomus
thermophilum H-6-12]
Length = 357
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/87 (47%), Positives = 61/87 (70%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV+++ R I++QNH+YA+D TLP G EV + NLND T G+ + +L
Sbjct: 270 KFGHRGANHPVYHVDTRRTYITSQNHSYAIDEKTLPPGFEVNYYNLNDHTVEGIKHNSLP 329
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVEL 87
++++Q+H EASPGP D+ +F ++ L
Sbjct: 330 LVAVQFHPEASPGPWDTKFIFDEYYRL 356
>gi|121535611|ref|ZP_01667417.1| carbamoyl-phosphate synthase, small subunit [Thermosinus
carboxydivorans Nor1]
gi|121305781|gb|EAX46717.1| carbamoyl-phosphate synthase, small subunit [Thermosinus
carboxydivorans Nor1]
Length = 354
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV ++ GRV I++QNH YAVD +L V VTH +NDGT GL + L
Sbjct: 262 KFGHRGSNHPVKDMFTGRVTITSQNHGYAVDEQSLADLDVIVTHRAVNDGTVEGLRHKTL 321
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EA+PGPDD+ +F++F+ L++ K
Sbjct: 322 PIFSVQYHPEAAPGPDDNTYLFKEFLALLRGGK 354
>gi|427730278|ref|YP_007076515.1| carbamoyl-phosphate synthase small subunit [Nostoc sp. PCC 7524]
gi|427366197|gb|AFY48918.1| carbamoyl-phosphate synthase, small subunit [Nostoc sp. PCC 7524]
Length = 388
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/93 (49%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
KFGH G N P Q +VEI++QNH++A++P +LP V E++H+NLND T AGL + +L
Sbjct: 290 KFGHRGLNQPAGLQQ--KVEITSQNHSFAINPDSLPDTVVEISHLNLNDRTVAGLRHKSL 347
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP D+D +F FV+ M++ +
Sbjct: 348 PIFSVQYHPEASPGPHDADYLFEQFVQAMQTAR 380
>gi|21672428|ref|NP_660495.1| carbamoyl phosphate synthase small subunit [Buchnera aphidicola
str. Sg (Schizaphis graminum)]
gi|25008212|sp|Q8K9Z6.1|CARA_BUCAP RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|21623039|gb|AAM67706.1| carbamoyl-phosphate synthase small chain [Buchnera aphidicola str.
Sg (Schizaphis graminum)]
Length = 385
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/93 (47%), Positives = 59/93 (63%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV I+ RV I++QNH++ VD +P + +TH +L DGT GL
Sbjct: 291 KFGHHGGNHPVKEIKTNRVIITSQNHSFTVDAKNMPNNIAITHSSLFDGTLQGLCLTDKL 350
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKY 93
S Q H EASPGP D+ +F F++L+ VK+
Sbjct: 351 AFSFQGHPEASPGPHDASSLFDHFIKLLNQVKF 383
>gi|260590036|ref|ZP_05855949.1| carbamoyl-phosphate synthase, small subunit [Blautia hansenii DSM
20583]
gi|260539548|gb|EEX20117.1| carbamoyl-phosphate synthase, small subunit [Blautia hansenii DSM
20583]
Length = 357
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/93 (48%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEV-THINLNDGTCAGLAYPAL 59
K+GH GGNHPV +++ GRV IS+QNH Y VD TL + V IN+ND T GL Y
Sbjct: 265 KYGHRGGNHPVKDLETGRVYISSQNHGYVVDTETLNPEIAVPAFINVNDKTNEGLKYTGK 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
N+ ++Q+H EA PGP DS +F F+++M+ K
Sbjct: 325 NIFTVQFHPEACPGPQDSGYLFDRFLKMMEVTK 357
>gi|429763983|ref|ZP_19296314.1| carbamoyl-phosphate synthase, small subunit [Clostridium celatum
DSM 1785]
gi|429188924|gb|EKY29786.1| carbamoyl-phosphate synthase, small subunit [Clostridium celatum
DSM 1785]
Length = 349
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ RV I++QNH Y VD LP+GV TH+N+NDGT G+ + L
Sbjct: 263 KFGHRGCNHPVKDLEKNRVHITSQNHGYVVD--ELPEGVVATHMNINDGTIEGMKHTTLP 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
+ S+Q+H EA+ GP DS+ +F F+E
Sbjct: 321 IYSVQFHPEAAAGPKDSEYIFDRFME 346
>gi|359789792|ref|ZP_09292723.1| carbamoyl phosphate synthase small subunit [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359254275|gb|EHK57299.1| carbamoyl phosphate synthase small subunit [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 400
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/90 (48%), Positives = 61/90 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH ++VD +LP+GVE TH++L DG+ G++ V
Sbjct: 303 GHHGANHPVKDHTTGKVEIVSMNHGFSVDSKSLPEGVEETHVSLFDGSNCGISLAGKPVF 362
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR F L++ K
Sbjct: 363 SVQHHPEASPGPQDSHYLFRRFANLIRERK 392
>gi|83594217|ref|YP_427969.1| carbamoyl-phosphate synthase small subunit [Rhodospirillum rubrum
ATCC 11170]
gi|386350969|ref|YP_006049217.1| carbamoyl-phosphate synthase small subunit [Rhodospirillum rubrum
F11]
gi|83577131|gb|ABC23682.1| carbamoyl-phosphate synthase small subunit [Rhodospirillum rubrum
ATCC 11170]
gi|346719405|gb|AEO49420.1| carbamoyl-phosphate synthase small subunit [Rhodospirillum rubrum
F11]
Length = 389
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 59/88 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G NHPV + G+VEI++ NH +AVD A+LP GV TH +L D GLA V
Sbjct: 299 GHRGANHPVKDHTTGKVEITSMNHGFAVDRASLPAGVTETHTSLFDNVLEGLAVDGKPVF 358
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+QYH EASPGP+DS +F+ FV+LM +
Sbjct: 359 SVQYHPEASPGPEDSHYLFKRFVDLMDA 386
>gi|260575545|ref|ZP_05843543.1| carbamoyl-phosphate synthase, small subunit [Rhodobacter sp. SW2]
gi|259022188|gb|EEW25486.1| carbamoyl-phosphate synthase, small subunit [Rhodobacter sp. SW2]
Length = 389
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/88 (50%), Positives = 58/88 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV +I G+VEI++ NH + VD +LPKGV TH++L DG+ G+ V
Sbjct: 298 GHHGANHPVKDIDTGKVEITSMNHGFTVDSQSLPKGVRETHVSLFDGSNCGIRVEGKPVF 357
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+QYH EASPGP DS +F F M++
Sbjct: 358 SVQYHPEASPGPQDSFYLFERFAASMQA 385
>gi|340777111|ref|ZP_08697054.1| carbamoyl phosphate synthase small subunit [Acetobacter aceti NBRC
14818]
Length = 458
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/86 (52%), Positives = 59/86 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G N PV +I+ G+VEI++QNH +AVD +LP V+VTHI+L D + G+A L
Sbjct: 366 GHRGANQPVKDIETGKVEITSQNHGFAVDEKSLPNDVKVTHISLFDKSNEGIASTTLPAF 425
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EASPGP DS +F FV L+
Sbjct: 426 SVQYHPEASPGPSDSFYLFERFVALI 451
>gi|299821732|ref|ZP_07053620.1| carbamoyl-phosphate synthase, small subunit [Listeria grayi DSM
20601]
gi|299817397|gb|EFI84633.1| carbamoyl-phosphate synthase, small subunit [Listeria grayi DSM
20601]
Length = 364
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV ++ GRV+ +AQNH YAVD A+L +E+THI LND T GLA+
Sbjct: 265 KFGHRGANHPVKELKTGRVDFTAQNHGYAVDKASLQDTDLEITHIELNDETVEGLAHREY 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
++QYH EA+PGP D + +F F+E+M
Sbjct: 325 PAYTVQYHPEANPGPSDVNYLFDGFMEMM 353
>gi|86137938|ref|ZP_01056514.1| carbamoyl-phosphate synthase small subunit [Roseobacter sp. MED193]
gi|85825530|gb|EAQ45729.1| carbamoyl-phosphate synthase small subunit [Roseobacter sp. MED193]
Length = 387
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 58/90 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV G+VEI++ NH +AVD TLP+GVE THI+L DG+ G+ V
Sbjct: 296 GHHGANHPVKEKSTGKVEITSMNHGFAVDAQTLPEGVEETHISLFDGSNCGIRMVGRPVY 355
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +F F E M K
Sbjct: 356 SVQHHPEASPGPQDSFYLFERFAEAMAERK 385
>gi|428210606|ref|YP_007083750.1| carbamoyl-phosphate synthase small subunit [Oscillatoria acuminata
PCC 6304]
gi|427998987|gb|AFY79830.1| carbamoyl-phosphate synthase small subunit [Oscillatoria acuminata
PCC 6304]
Length = 418
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/95 (49%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P G+VEI++QNH++A+ +L VE+TH+NLND T AGL + +L
Sbjct: 322 KFGHRGLNQPAG--LTGQVEITSQNHSFALSDDSLGSEVEITHLNLNDRTIAGLRHKSLP 379
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
V S+QYH EASPGP D+D +F+ FV+ M+ + A
Sbjct: 380 VFSVQYHPEASPGPHDADYIFKRFVDSMREARTAA 414
>gi|84516907|ref|ZP_01004265.1| carbamoyl-phosphate synthase small subunit [Loktanella
vestfoldensis SKA53]
gi|84509375|gb|EAQ05834.1| carbamoyl-phosphate synthase small subunit [Loktanella
vestfoldensis SKA53]
Length = 382
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 59/92 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++Q G+VEI++ NH + VD TLP GV TH++L DG+ G+ V
Sbjct: 291 GHHGANHPVKDMQTGKVEITSMNHGFTVDSQTLPAGVIETHVSLFDGSNCGIRLDGRPVF 350
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EASPGP DS +F F E M + R
Sbjct: 351 SVQYHPEASPGPQDSYYLFERFAEAMDTRAAR 382
>gi|313679664|ref|YP_004057403.1| carbamoyl-phosphate synthase small subunit [Oceanithermus profundus
DSM 14977]
gi|313152379|gb|ADR36230.1| carbamoyl-phosphate synthase small subunit [Oceanithermus profundus
DSM 14977]
Length = 388
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV N+ +G +EI++QNH YAVD +L + + TH+NLNDGT G+A+
Sbjct: 281 KFGHRGANHPVKNLLDGSIEITSQNHGYAVDLDSL-REFKPTHVNLNDGTLEGMAHERYP 339
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
V S+QYH EASPGP DS +F+ F++
Sbjct: 340 VFSVQYHPEASPGPHDSRYLFKRFLD 365
>gi|313143216|ref|ZP_07805409.1| carbamoyl-phosphate synthase small chain protein [Helicobacter
cinaedi CCUG 18818]
gi|386762416|ref|YP_006236052.1| carbamoyl phosphate synthase small subunit [Helicobacter cinaedi
PAGU611]
gi|313128247|gb|EFR45864.1| carbamoyl-phosphate synthase small chain protein [Helicobacter
cinaedi CCUG 18818]
gi|385147433|dbj|BAM12941.1| carbamoyl phosphate synthase small subunit [Helicobacter cinaedi
PAGU611]
gi|396079851|dbj|BAM33227.1| carbamoyl phosphate synthase small subunit [Helicobacter cinaedi
ATCC BAA-847]
Length = 381
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHP+ N+Q+G VEI+AQNHNY V P ++ + +TH NL D T G+ Y
Sbjct: 290 KFGHHGGNHPIKNLQSGAVEITAQNHNYCV-PESISEIATITHRNLFDNTIEGVRYKNKP 348
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVEL 87
+ S+Q+H EASPGP ++ +F+DF L
Sbjct: 349 IFSVQHHPEASPGPKEARILFQDFATL 375
>gi|440683151|ref|YP_007157946.1| carbamoyl-phosphate synthase small subunit [Anabaena cylindrica PCC
7122]
gi|428680270|gb|AFZ59036.1| carbamoyl-phosphate synthase small subunit [Anabaena cylindrica PCC
7122]
Length = 385
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
KFGH G N P Q +VEI++QNH++A+DP +LP V EV+H+NLND T AG+ + +L
Sbjct: 290 KFGHRGLNQPAGLQQ--KVEITSQNHSFAIDPDSLPSAVVEVSHLNLNDRTVAGVRHKSL 347
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
V S+QYH EASPGP D+D +F FV M++ + A
Sbjct: 348 PVFSVQYHPEASPGPHDADYLFEQFVLEMQTARQAA 383
>gi|386814628|ref|ZP_10101846.1| carbamoyl-phosphate synthase small subunit [Thiothrix nivea DSM
5205]
gi|386419204|gb|EIJ33039.1| carbamoyl-phosphate synthase small subunit [Thiothrix nivea DSM
5205]
Length = 379
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 59/92 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ N V IS+QNH +AVD TLP V TH +L DGT G+A
Sbjct: 287 KFGHHGANHPVQDLDNKHVMISSQNHGFAVDETTLPPNVRATHRSLFDGTLQGIARTDCP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+S Q H EASPGP D VF F+++M++ K
Sbjct: 347 AISFQGHPEASPGPHDVAPVFDRFIDMMRTAK 378
>gi|442611483|ref|ZP_21026189.1| Carbamoyl-phosphate synthase small chain [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
gi|441747411|emb|CCQ12251.1| Carbamoyl-phosphate synthase small chain [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
Length = 378
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/92 (48%), Positives = 59/92 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++ V I+AQNH +A D ATLP + TH++L DGT G+
Sbjct: 286 KFGHHGGNHPVKDLDRNVVMITAQNHGFAADEATLPANLRATHVSLFDGTLQGIHRTDKP 345
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D+ +F F++LM++ K
Sbjct: 346 AFSFQGHPEASPGPHDAAPLFDHFIDLMQARK 377
>gi|86604920|ref|YP_473683.1| carbamoyl phosphate synthase small subunit [Synechococcus sp.
JA-3-3Ab]
gi|86553462|gb|ABC98420.1| carbamoyl-phosphate synthase, small subunit [Synechococcus sp.
JA-3-3Ab]
Length = 395
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/95 (51%), Positives = 66/95 (69%), Gaps = 3/95 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHP VEI++QNH +AV+ A+LP GV ++++NLND T AG+ + L
Sbjct: 303 KFGHRGLNHPCG--LEKEVEITSQNHGFAVEAASLPGDGVAISYLNLNDRTVAGIRHRQL 360
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
+ S+QYH EASPGP D+D +FR+FVELM + R
Sbjct: 361 PLFSVQYHPEASPGPHDADHLFREFVELMLQNRSR 395
>gi|443321339|ref|ZP_21050395.1| carbamoyl-phosphate synthase, small subunit [Gloeocapsa sp. PCC
73106]
gi|442788957|gb|ELR98634.1| carbamoyl-phosphate synthase, small subunit [Gloeocapsa sp. PCC
73106]
Length = 379
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P + +VEI++QNH +A++ +L VE+TH+NLND T AGL + L
Sbjct: 290 KFGHRGLNQPA-GLSQQQVEITSQNHGFAIEADSLGTDVEITHLNLNDRTIAGLRHKTLP 348
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
S+QYH EASPGP D+D +F FV+LM+
Sbjct: 349 FFSVQYHPEASPGPHDADYLFEKFVQLMR 377
>gi|225574485|ref|ZP_03783095.1| hypothetical protein RUMHYD_02562 [Blautia hydrogenotrophica DSM
10507]
gi|225038272|gb|EEG48518.1| carbamoyl-phosphate synthase, small subunit [Blautia
hydrogenotrophica DSM 10507]
Length = 357
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/93 (48%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
K+GH GGNHPV +++ GRV IS+QNH Y VD TL + V +N+ND T GL Y
Sbjct: 265 KYGHRGGNHPVKDLKTGRVYISSQNHGYVVDTETLDERVARPAFVNVNDQTNEGLEYIGK 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
N+ ++Q+H EA PGP DS +F F+E+M K
Sbjct: 325 NIFTVQFHPEACPGPQDSSYLFERFIEMMGGTK 357
>gi|237752107|ref|ZP_04582587.1| carbamoyl-phosphate synthase subunit small [Helicobacter
winghamensis ATCC BAA-430]
gi|229376349|gb|EEO26440.1| carbamoyl-phosphate synthase subunit small [Helicobacter
winghamensis ATCC BAA-430]
Length = 381
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N+ +VEI+AQNHNY+V P ++ + EVTH NL D T G+ Y
Sbjct: 290 KFGHHGGNHPVKNLLTNQVEITAQNHNYSV-PESIVEIAEVTHRNLFDNTIEGVRYKNAL 348
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
+ S Q+H EA PGP +S +F++F +L+ S
Sbjct: 349 ICSFQHHPEAGPGPLESAALFKEFSKLLDS 378
>gi|154496702|ref|ZP_02035398.1| hypothetical protein BACCAP_00994 [Bacteroides capillosus ATCC
29799]
gi|150273954|gb|EDN01054.1| carbamoyl-phosphate synthase, small subunit [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 363
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
+FGH GGNHPV ++++GR I++QNH Y V ++ P+ E++H+N+N+G+ GL Y
Sbjct: 268 RFGHRGGNHPVKDLEHGRAYITSQNHGYVVTKESVNPEVAEISHVNVNEGSVEGLKYKRP 327
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
N ++Q+H EASPGP D++ +F +FV++MK
Sbjct: 328 NCFTVQFHPEASPGPMDTEYLFDNFVDMMK 357
>gi|262044925|ref|ZP_06017967.1| carbamoyl-phosphate synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259037652|gb|EEW38881.1| carbamoyl-phosphate synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 391
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 296 KFGHHGGNHPVKDIDNNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 355
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 356 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRQSA 390
>gi|81300931|ref|YP_401139.1| carbamoyl phosphate synthase small subunit [Synechococcus elongatus
PCC 7942]
gi|123556422|sp|Q31LB7.1|CARA_SYNE7 RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|81169812|gb|ABB58152.1| carbamoyl-phosphate synthase small subunit [Synechococcus elongatus
PCC 7942]
Length = 391
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/89 (56%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHP Q +VEI++QNH +A+ +L VEVTH+NLND T AGL + L
Sbjct: 297 KFGHRGLNHPCGLSQ--QVEITSQNHGFAIAADSLGPDVEVTHLNLNDRTVAGLRHRHLP 354
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S+QYH EASPGP DSD +F FV LM+
Sbjct: 355 VFSVQYHPEASPGPHDSDYLFEQFVALMR 383
>gi|408822700|ref|ZP_11207590.1| carbamoyl phosphate synthase small subunit [Pseudomonas geniculata
N1]
Length = 375
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 59/90 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ +GRV I++QNH +A+D ATLP + VTH +L DGT G+A +
Sbjct: 285 GHHGANHPVQDLDSGRVMITSQNHGFAIDEATLPPTLRVTHRSLFDGTNQGVARTDVPAF 344
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D +F FV LM+ K
Sbjct: 345 SFQGHPEASPGPTDVGPLFDRFVVLMEQAK 374
>gi|389696834|ref|ZP_10184476.1| carbamoyl-phosphate synthase, small subunit [Microvirga sp.
WSM3557]
gi|388585640|gb|EIM25935.1| carbamoyl-phosphate synthase, small subunit [Microvirga sp.
WSM3557]
Length = 403
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 60/93 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI++ NH +AVDP TLP TH++L DG+ G++
Sbjct: 311 GHHGANHPVKDKTTGKVEITSMNHGFAVDPETLPSNAVETHVSLFDGSNCGISLTDRPAF 370
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EASPGP DS +F FV+LM K +A
Sbjct: 371 SVQYHPEASPGPQDSHYLFDRFVQLMDGKKAKA 403
>gi|386718391|ref|YP_006184717.1| carbamoyl-phosphate synthase small subunit [Stenotrophomonas
maltophilia D457]
gi|384077953|emb|CCH12542.1| Carbamoyl-phosphate synthase small chain [Stenotrophomonas
maltophilia D457]
Length = 375
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 59/90 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ +GRV I++QNH +A+D ATLP + VTH +L DGT G+A +
Sbjct: 285 GHHGANHPVQDLDSGRVMITSQNHGFAIDEATLPPTLRVTHRSLFDGTNQGVARTDVPAF 344
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D +F FV LM+ K
Sbjct: 345 SFQGHPEASPGPTDVGPLFDRFVVLMEQAK 374
>gi|190574172|ref|YP_001972017.1| carbamoyl phosphate synthase small subunit [Stenotrophomonas
maltophilia K279a]
gi|190012094|emb|CAQ45716.1| putative carbamoyl-phosphate synthase small chain [Stenotrophomonas
maltophilia K279a]
Length = 393
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 59/90 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ +GRV I++QNH +A+D ATLP + VTH +L DGT G+A +
Sbjct: 303 GHHGANHPVQDLDSGRVMITSQNHGFAIDEATLPPTLRVTHRSLFDGTNQGVARTDVPAF 362
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D +F FV LM+ K
Sbjct: 363 SFQGHPEASPGPTDVGPLFDRFVVLMEQAK 392
>gi|444353187|ref|YP_007389331.1| Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) [Enterobacter
aerogenes EA1509E]
gi|443904017|emb|CCG31791.1| Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) [Enterobacter
aerogenes EA1509E]
Length = 382
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDIDNNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRQSA 381
>gi|365142600|ref|ZP_09347716.1| carbamoyl-phosphate synthase small chain [Klebsiella sp. 4_1_44FAA]
gi|386033098|ref|YP_005953011.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
KCTC 2242]
gi|424828899|ref|ZP_18253627.1| carbamoyl-phosphate synthase, small subunit [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
gi|449056767|ref|ZP_21735431.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
hvKP1]
gi|339760226|gb|AEJ96446.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
KCTC 2242]
gi|363651382|gb|EHL90450.1| carbamoyl-phosphate synthase small chain [Klebsiella sp. 4_1_44FAA]
gi|414706315|emb|CCN28019.1| carbamoyl-phosphate synthase, small subunit [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
gi|448875516|gb|EMB10531.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
hvKP1]
Length = 382
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDIDNNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRQSA 381
>gi|392548668|ref|ZP_10295805.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Pseudoalteromonas rubra ATCC 29570]
Length = 378
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 59/92 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +A D ATLP + TH +L DGT G+
Sbjct: 286 KFGHHGGNHPVKDLERDVVMITAQNHGFAADEATLPDNLRATHKSLFDGTLQGIHRTDKP 345
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D+ +F F+ELM++ K
Sbjct: 346 AFSFQGHPEASPGPHDAAPLFDHFIELMQARK 377
>gi|297617729|ref|YP_003702888.1| carbamoyl-phosphate synthase, small subunit [Syntrophothermus
lipocalidus DSM 12680]
gi|297145566|gb|ADI02323.1| carbamoyl-phosphate synthase, small subunit [Syntrophothermus
lipocalidus DSM 12680]
Length = 356
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
+FGH GGNHPV ++ G+V I++QNH YAVD +L + G V+ NLNDGT GL + L
Sbjct: 268 RFGHRGGNHPVKDLHTGKVHITSQNHGYAVDETSLSRVGAYVSFRNLNDGTVEGLRHDEL 327
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
V+S+Q+H EA+PGP D++ +F F+ LM
Sbjct: 328 PVLSVQFHPEAAPGPQDTEYLFDSFLNLM 356
>gi|336248679|ref|YP_004592389.1| carbamoyl phosphate synthase small subunit [Enterobacter aerogenes
KCTC 2190]
gi|334734735|gb|AEG97110.1| carbamoyl phosphate synthase small subunit [Enterobacter aerogenes
KCTC 2190]
Length = 382
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDIDNNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRQSA 381
>gi|404418432|ref|ZP_11000199.1| carbamoyl phosphate synthase small subunit [Staphylococcus arlettae
CVD059]
gi|403489025|gb|EJY94603.1| carbamoyl phosphate synthase small subunit [Staphylococcus arlettae
CVD059]
Length = 366
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ ++ +++QNH YA+D +L +EVTHI +NDGT GL + L
Sbjct: 266 KFGHRGANHPVKDLKTNKIALTSQNHGYAIDKDSLQNTDLEVTHIAINDGTVEGLRHKFL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EA PGP DS+ +F +F+E+M
Sbjct: 326 PAFSVQYHPEACPGPSDSNYLFDEFIEMM 354
>gi|417957242|ref|ZP_12600167.1| carbamoyl-phosphate synthase, small subunit [Neisseria weaveri ATCC
51223]
gi|343968646|gb|EGV36871.1| carbamoyl-phosphate synthase, small subunit [Neisseria weaveri ATCC
51223]
Length = 376
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGHHGGNHPV ++++G+V I++QNH + VD TLP V+VTH +L DG+ G+ V
Sbjct: 285 FGHHGGNHPVQDLESGKVMITSQNHGFEVDAETLPANVKVTHRSLFDGSLQGIELTDRTV 344
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D +F F++ MK+ K
Sbjct: 345 FSFQGHPEASPGPHDVAYLFDKFIDNMKAAK 375
>gi|429100753|ref|ZP_19162727.1| Carbamoyl-phosphate synthase small chain [Cronobacter turicensis
564]
gi|426287402|emb|CCJ88840.1| Carbamoyl-phosphate synthase small chain [Cronobacter turicensis
564]
Length = 115
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N RV I+AQNH +AVD AT+P + VTH +L D T G+
Sbjct: 20 KFGHHGGNHPVKDIDNNRVMITAQNHGFAVDEATMPSTLRVTHKSLFDNTLQGIHRTDKP 79
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 80 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 114
>gi|78047463|ref|YP_363638.1| carbamoyl phosphate synthase small subunit [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|78035893|emb|CAJ23584.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 374
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 57/88 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ GRV I++QNH +AVD +TLP V VTH +L DGT G+A
Sbjct: 285 GHHGANHPVQDLDGGRVMITSQNHGFAVDESTLPANVRVTHRSLFDGTNQGIALTDAPAF 344
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D +F FV+LM +
Sbjct: 345 SFQGHPEASPGPRDVGPLFDRFVDLMAA 372
>gi|325925174|ref|ZP_08186587.1| carbamoyl-phosphate synthase small subunit [Xanthomonas perforans
91-118]
gi|325544428|gb|EGD15798.1| carbamoyl-phosphate synthase small subunit [Xanthomonas perforans
91-118]
Length = 374
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 57/88 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ GRV I++QNH +AVD +TLP V VTH +L DGT G+A
Sbjct: 285 GHHGANHPVQDLDGGRVMITSQNHGFAVDESTLPANVRVTHRSLFDGTNQGIALTDAPAF 344
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D +F FV+LM +
Sbjct: 345 SFQGHPEASPGPRDVGPLFDRFVDLMAA 372
>gi|323140643|ref|ZP_08075567.1| carbamoyl-phosphate synthase, small subunit [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414907|gb|EFY05702.1| carbamoyl-phosphate synthase, small subunit [Phascolarctobacterium
succinatutens YIT 12067]
Length = 359
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G N PV + GR+ ISAQNH YAVD +L KG+ ++HI++NDGT GL Y
Sbjct: 268 KFGHRGINQPVKYLATGRIYISAQNHGYAVDEKSLEGKGINISHISMNDGTIEGLEYTKH 327
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++QYH EA PGP D D +F+ FV++M+
Sbjct: 328 PTFTVQYHPEACPGPGDHDYLFKHFVDMME 357
>gi|451945713|ref|YP_007466308.1| carbamoyl-phosphate synthase small subunit [Desulfocapsa
sulfexigens DSM 10523]
gi|451905061|gb|AGF76655.1| carbamoyl-phosphate synthase small subunit [Desulfocapsa
sulfexigens DSM 10523]
Length = 372
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV ++ G+VEI+AQNH + VD +L P VE+THINLNDG+ G+ +
Sbjct: 283 KFGHRGGNQPVKDLSTGKVEITAQNHGFCVDMESLSPDDVELTHINLNDGSVEGMRHRKY 342
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
S+QYH E +PGP D+ +F F+E+M+
Sbjct: 343 PAFSVQYHPEHAPGPHDALYLFDRFIEMMR 372
>gi|307944275|ref|ZP_07659616.1| carbamoyl-phosphate synthase, small subunit [Roseibium sp.
TrichSKD4]
gi|307772621|gb|EFO31841.1| carbamoyl-phosphate synthase, small subunit [Roseibium sp.
TrichSKD4]
Length = 422
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/90 (48%), Positives = 61/90 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI++ NH +AVD +LP+ VE TH++L DG+ GL +
Sbjct: 331 GHHGANHPVFDHTTGKVEITSMNHGFAVDAESLPEDVEQTHVSLFDGSNCGLRHKTKPAF 390
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F+ F ++M+ K
Sbjct: 391 SVQYHPEASPGPRDSHYLFQRFTDMMRGQK 420
>gi|296116670|ref|ZP_06835280.1| carbamoyl phosphate synthase small subunit [Gluconacetobacter
hansenii ATCC 23769]
gi|295976882|gb|EFG83650.1| carbamoyl phosphate synthase small subunit [Gluconacetobacter
hansenii ATCC 23769]
Length = 466
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/93 (48%), Positives = 61/93 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G N PV ++ G+VEI++QNH +AVD +LP GV THI+L DG+ G+A
Sbjct: 374 GHRGANQPVKDLATGKVEITSQNHGFAVDDKSLPAGVRATHISLFDGSNEGIASDRHPAF 433
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH E+SPGP DS +F FV L+ S+ + A
Sbjct: 434 SVQYHPESSPGPSDSRYLFDRFVALIDSLSHTA 466
>gi|260889103|ref|ZP_05900366.1| carbamoyl-phosphate synthase, small subunit [Leptotrichia hofstadii
F0254]
gi|260861163|gb|EEX75663.1| carbamoyl-phosphate synthase, small subunit [Leptotrichia hofstadii
F0254]
Length = 360
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPALN 60
FGH G N PV N+Q G+V+I+AQNH YAVD +L +E+THI +ND TC G+ +
Sbjct: 268 FGHRGANQPVINLQTGKVDITAQNHGYAVDIDSLKDTDLELTHIAVNDRTCEGVRHKKYP 327
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S+QYH EASPGP D + +F F+E MK
Sbjct: 328 VFSVQYHPEASPGPHDPNYLFDIFIENMK 356
>gi|388567378|ref|ZP_10153812.1| Carbamoyl-phosphate synthase small chain [Hydrogenophaga sp. PBC]
gi|388265400|gb|EIK90956.1| Carbamoyl-phosphate synthase small chain [Hydrogenophaga sp. PBC]
Length = 451
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 57/89 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ +GRV I++QNH +AVD TLP + TH++L DGT GLA
Sbjct: 356 KFGHHGANHPVKDLDDGRVSITSQNHGFAVDEKTLPANLRPTHVSLFDGTLQGLARTDQP 415
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
Q H EASPGP D +F FV LMK
Sbjct: 416 AFCFQGHPEASPGPHDIGYLFDRFVSLMK 444
>gi|365855652|ref|ZP_09395695.1| carbamoyl-phosphate synthase, small subunit [Acetobacteraceae
bacterium AT-5844]
gi|363718960|gb|EHM02281.1| carbamoyl-phosphate synthase, small subunit [Acetobacteraceae
bacterium AT-5844]
Length = 460
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 62/90 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G N PV ++ G+VEI++QNH +AVD A+LP V+VTH +L DG+ G+A
Sbjct: 370 GHRGANQPVQDLATGKVEITSQNHGFAVDEASLPANVKVTHKSLFDGSNEGIASTDKPAF 429
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F FVE++++ K
Sbjct: 430 SVQYHPEASPGPSDSHYLFHRFVEMIEAQK 459
>gi|420449310|ref|ZP_14948181.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
H-44]
gi|393062613|gb|EJB63462.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
H-44]
Length = 375
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEAIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|421720261|ref|ZP_16159544.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori
R046Wa]
gi|407220300|gb|EKE90108.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori
R046Wa]
Length = 375
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLKTNAVEITAQNHNYCV-PEAIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|425457652|ref|ZP_18837350.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9807]
gi|389800915|emb|CCI19835.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9807]
Length = 382
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P Q +VEI++QNH +AV A+L VE+TH+NLND T AGL + +L
Sbjct: 289 KFGHRGLNQPCGLQQ--QVEITSQNHGFAVQEASLNPQVEITHLNLNDRTVAGLKHKSLP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+D +F FV+LM+ K
Sbjct: 347 FFSVQYHPEASPGPHDADYLFAKFVDLMRQAK 378
>gi|386746653|ref|YP_006219870.1| carbamoyl phosphate synthase small subunit [Helicobacter pylori
HUP-B14]
gi|384552902|gb|AFI07850.1| carbamoyl phosphate synthase small subunit [Helicobacter pylori
HUP-B14]
Length = 375
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEAIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|420429279|ref|ZP_14928312.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
A-17]
gi|393044609|gb|EJB45601.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
A-17]
Length = 375
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEAIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|425451337|ref|ZP_18831159.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 7941]
gi|389767416|emb|CCI07182.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 7941]
Length = 382
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P Q +VEI++QNH +AV A+L VE+TH+NLND T AGL + +L
Sbjct: 289 KFGHRGLNQPCGLQQ--QVEITSQNHGFAVQEASLNPQVEITHLNLNDRTVAGLKHKSLP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+D +F FV+LM+ K
Sbjct: 347 FFSVQYHPEASPGPHDADYLFAKFVDLMRQAK 378
>gi|257459110|ref|ZP_05624229.1| carbamoyl-phosphate synthase, small subunit [Campylobacter gracilis
RM3268]
gi|257443495|gb|EEV18619.1| carbamoyl-phosphate synthase, small subunit [Campylobacter gracilis
RM3268]
Length = 372
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/88 (50%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFG HG NHPV N++ +EI+AQNHNY V P T+ + E+TH NL DGT G+ Y
Sbjct: 286 KFGQHGANHPVQNLRTKSIEITAQNHNYNV-PETIAQICEITHRNLFDGTIEGVRYKDYP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
V S+Q+H EAS GP +S +F++F+E++
Sbjct: 345 VFSVQHHPEASAGPTESKYIFKEFLEIL 372
>gi|420503258|ref|ZP_15001792.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
P-41]
gi|393149354|gb|EJC49664.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
P-41]
Length = 375
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEEIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|425467412|ref|ZP_18846695.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9809]
gi|389829834|emb|CCI28536.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9809]
Length = 382
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P Q +VEI++QNH +AV A+L VE+TH+NLND T AGL + +L
Sbjct: 289 KFGHRGLNQPCGLRQ--QVEITSQNHGFAVQEASLNPQVEITHLNLNDRTVAGLKHKSLP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+D +F FV+LM+ K
Sbjct: 347 FFSVQYHPEASPGPHDADYLFAKFVDLMRQAK 378
>gi|456735747|gb|EMF60473.1| Carbamoyl-phosphate synthase small chain [Stenotrophomonas
maltophilia EPM1]
Length = 375
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 59/90 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ +GRV I++QNH +A+D ATLP + VTH +L DGT G+A +
Sbjct: 285 GHHGANHPVQDLDSGRVMITSQNHGFAIDEATLPPTLRVTHRSLFDGTNQGVARTDVPAF 344
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D +F FV LM+ K
Sbjct: 345 SFQGHPEASPGPTDVGPLFDRFVVLMEQAK 374
>gi|295110642|emb|CBL24595.1| carbamoyl-phosphate synthase, small subunit [Ruminococcus obeum
A2-162]
Length = 362
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/90 (48%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG--VEVTHINLNDGTCAGLAYPA 58
K+GH GGNHPV +++ GRV IS+QNH Y VD L K + IN+NDGT G+AY
Sbjct: 265 KYGHRGGNHPVKDLETGRVYISSQNHGYVVDAEALEKKGIAKPAFINVNDGTNEGMAYEG 324
Query: 59 LNVMSLQYHLEASPGPDDSDCVFRDFVELM 88
N+ ++Q+H EA PGP DS +F F+++M
Sbjct: 325 KNIFTVQFHPEACPGPQDSSYLFDRFMKMM 354
>gi|329767648|ref|ZP_08259168.1| carbamoyl-phosphate synthase small subunit [Gemella haemolysans
M341]
gi|328839075|gb|EGF88661.1| carbamoyl-phosphate synthase small subunit [Gemella haemolysans
M341]
Length = 362
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/93 (46%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ G+V+I++QNH ++VD +L +E+TH+++ND TC G+ +
Sbjct: 267 KFGHRGANHPVKNLITGKVDITSQNHGFSVDIESLKDTDLELTHLSVNDKTCEGVRHKKY 326
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+QYH EASPGP D + +F F++ M+ K
Sbjct: 327 PVFSVQYHPEASPGPHDPNYLFDQFIDYMREFK 359
>gi|315926044|ref|ZP_07922245.1| carbamoyl-phosphate synthase, small subunit [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315620658|gb|EFV00638.1| carbamoyl-phosphate synthase, small subunit [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 382
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/89 (48%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPALN 60
FGH G N PV ++ RV I++QNH YAV +LP+G VTHIN+NDGTC G+ YP +
Sbjct: 287 FGHRGLNQPVKDLDKDRVYITSQNHGYAVIGDSLPQGAGRVTHINMNDGTCEGIDYPDAH 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++Q+H EAS GP+D+ +F F ++M+
Sbjct: 347 AFTVQFHPEASAGPNDTGYLFEKFTDMME 375
>gi|256369900|ref|YP_003107411.1| carbamoyl phosphate synthase small subunit [Brucella microti CCM
4915]
gi|256000063|gb|ACU48462.1| carbamoyl-phosphate synthase small subunit [Brucella microti CCM
4915]
Length = 407
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+ VE TH++L DGT GL V
Sbjct: 306 GHHGANHPVKDYTTGKVEIVSMNHGFAVDSDSLPENVEETHVSLFDGTNCGLRVVGKPVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR F+ L++ K +A
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINLIRERKGQA 398
>gi|366159521|ref|ZP_09459383.1| carbamoyl phosphate synthase small subunit [Escherichia sp.
TW09308]
gi|432374962|ref|ZP_19617985.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE11]
gi|430892220|gb|ELC14712.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE11]
Length = 382
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I+ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDIEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAMLFDHFIELIEQYRKTA 381
>gi|334144144|ref|YP_004537300.1| carbamoyl-phosphate synthase small subunit [Thioalkalimicrobium
cyclicum ALM1]
gi|333965055|gb|AEG31821.1| carbamoyl-phosphate synthase, small subunit [Thioalkalimicrobium
cyclicum ALM1]
Length = 380
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 57/85 (67%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++ GRV I++QNH +AVDPATLP V+VTH +L DG+ G+
Sbjct: 285 KFGHHGGNHPVQELETGRVMITSQNHGFAVDPATLPAHVKVTHNSLFDGSLQGITLTDRP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFV 85
S Q H EASPGP D +F F+
Sbjct: 345 AFSFQGHPEASPGPHDLAPLFDQFI 369
>gi|306843165|ref|ZP_07475783.1| carbamoyl-phosphate synthase, small subunit [Brucella sp. BO2]
gi|306286643|gb|EFM58206.1| carbamoyl-phosphate synthase, small subunit [Brucella sp. BO2]
Length = 422
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+ VE TH++L DGT GL V
Sbjct: 321 GHHGANHPVKDYTTGKVEIVSMNHGFAVDSDSLPENVEETHVSLFDGTNCGLRVVGKPVF 380
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR F+ L++ K +A
Sbjct: 381 SVQHHPEASPGPQDSHYLFRRFINLIRERKGQA 413
>gi|167645002|ref|YP_001682665.1| carbamoyl phosphate synthase small subunit [Caulobacter sp. K31]
gi|167347432|gb|ABZ70167.1| carbamoyl-phosphate synthase, small subunit [Caulobacter sp. K31]
Length = 388
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 59/90 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI + NH + VD A+LP V TH++L DGT AG+A V
Sbjct: 299 GHHGANHPVKDLTTGKVEIVSMNHGFTVDSASLPAAVTETHVSLFDGTNAGIALEGKPVF 358
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +F F LM + K
Sbjct: 359 SVQHHPEASPGPTDSLYLFERFAGLMDAAK 388
>gi|260596462|ref|YP_003209033.1| carbamoyl phosphate synthase small subunit [Cronobacter turicensis
z3032]
gi|260215639|emb|CBA27923.1| Carbamoyl-phosphate synthase small chain [Cronobacter turicensis
z3032]
Length = 391
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N RV I+AQNH +AVD AT+P + VTH +L D T G+
Sbjct: 296 KFGHHGGNHPVKDIDNNRVMITAQNHGFAVDEATMPSTLRVTHKSLFDNTLQGIHRTDKP 355
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 356 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 390
>gi|115523004|ref|YP_779915.1| carbamoyl phosphate synthase small subunit [Rhodopseudomonas
palustris BisA53]
gi|115516951|gb|ABJ04935.1| carbamoyl-phosphate synthase small subunit [Rhodopseudomonas
palustris BisA53]
Length = 396
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 62/90 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI++ NH +A+D ATLP V TH++L D + G+A V
Sbjct: 305 GHHGANHPVKDLTTGKVEITSMNHGFALDKATLPGNVTQTHVSLFDDSNCGIALADRPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F+ F +LM++ K
Sbjct: 365 SVQYHPEASPGPRDSHYLFKRFADLMRANK 394
>gi|420434492|ref|ZP_14933494.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
H-24]
gi|420508219|ref|ZP_15006725.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori Hp
H-24b]
gi|420509854|ref|ZP_15008352.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori Hp
H-24c]
gi|420533637|ref|ZP_15031995.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
M1]
gi|420535201|ref|ZP_15033546.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
M2]
gi|420537014|ref|ZP_15035349.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
M3]
gi|420538760|ref|ZP_15037083.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
M4]
gi|420540399|ref|ZP_15038715.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
M5]
gi|420542120|ref|ZP_15040426.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
M6]
gi|420543624|ref|ZP_15041915.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
M9]
gi|393048012|gb|EJB48980.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
H-24]
gi|393115011|gb|EJC15522.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori Hp
H-24b]
gi|393118089|gb|EJC18587.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori Hp
H-24c]
gi|393136644|gb|EJC37034.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
M1]
gi|393139486|gb|EJC39860.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
M2]
gi|393140991|gb|EJC41357.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
M3]
gi|393141874|gb|EJC42230.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
M4]
gi|393144649|gb|EJC44981.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
M5]
gi|393145842|gb|EJC46172.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
M6]
gi|393159220|gb|EJC59474.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
M9]
Length = 375
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEAIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|266621405|ref|ZP_06114340.1| carbamoyl-phosphate synthase, small subunit [Clostridium hathewayi
DSM 13479]
gi|288866919|gb|EFC99217.1| carbamoyl-phosphate synthase, small subunit [Clostridium hathewayi
DSM 13479]
Length = 357
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/93 (49%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEV-THINLNDGTCAGLAYPAL 59
K+GH GGNHPV +++ GRV IS+QNH Y VD T+ G V +N+NDGT GL Y
Sbjct: 265 KYGHRGGNHPVKDLETGRVYISSQNHGYVVDMDTIDPGTAVPAFVNVNDGTNEGLKYVNK 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
N+ ++QYH EA PGP DS +F F+ +M+ K
Sbjct: 325 NIFTVQYHPEACPGPLDSGYLFDRFLNMMEEGK 357
>gi|84624397|ref|YP_451769.1| carbamoyl phosphate synthase small subunit [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|161898979|ref|YP_201527.2| carbamoyl phosphate synthase small subunit [Xanthomonas oryzae pv.
oryzae KACC 10331]
gi|84368337|dbj|BAE69495.1| carbamoyl-phosphate synthase small chain [Xanthomonas oryzae pv.
oryzae MAFF 311018]
Length = 374
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 57/88 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ GRV I++QNH +AVD +TLP V VTH +L DGT G+A
Sbjct: 285 GHHGANHPVQDLDGGRVMITSQNHGFAVDESTLPANVRVTHRSLFDGTNQGIALTDAPAF 344
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D +F FV+LM +
Sbjct: 345 SFQGHPEASPGPRDVGPLFDRFVDLMAA 372
>gi|346724791|ref|YP_004851460.1| carbamoyl phosphate synthase small subunit [Xanthomonas axonopodis
pv. citrumelo F1]
gi|346649538|gb|AEO42162.1| carbamoyl phosphate synthase small subunit [Xanthomonas axonopodis
pv. citrumelo F1]
Length = 374
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 57/88 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ GRV I++QNH +AVD +TLP V VTH +L DGT G+A
Sbjct: 285 GHHGANHPVQDLDGGRVMITSQNHGFAVDESTLPANVRVTHRSLFDGTNQGIALTDAPAF 344
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D +F FV+LM +
Sbjct: 345 SFQGHPEASPGPRDVGPLFDRFVDLMAA 372
>gi|306844490|ref|ZP_07477079.1| carbamoyl-phosphate synthase, small subunit [Brucella inopinata
BO1]
gi|306275101|gb|EFM56857.1| carbamoyl-phosphate synthase, small subunit [Brucella inopinata
BO1]
Length = 407
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+ VE TH++L DGT GL V
Sbjct: 306 GHHGANHPVKDYTTGKVEIVSMNHGFAVDSDSLPENVEETHVSLFDGTNCGLRVVGKPVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR F+ L++ K +A
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINLIRERKGQA 398
>gi|237745679|ref|ZP_04576159.1| multifunctional protein CAD [Oxalobacter formigenes HOxBLS]
gi|229377030|gb|EEO27121.1| multifunctional protein CAD [Oxalobacter formigenes HOxBLS]
Length = 382
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 59/92 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV +I+ G+V I++QNH +AVD TLP +VTH +L DG+ G A
Sbjct: 288 KFGHHGANHPVQDIETGKVLITSQNHGFAVDATTLPSNCKVTHKSLFDGSLQGFARTDKP 347
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
Q H EASPGP D D +F FV +M++ +
Sbjct: 348 AFCFQGHPEASPGPGDVDYLFDRFVGMMETAR 379
>gi|166365584|ref|YP_001657857.1| carbamoyl phosphate synthase small subunit [Microcystis aeruginosa
NIES-843]
gi|166087957|dbj|BAG02665.1| carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
NIES-843]
Length = 382
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P Q +VEI++QNH +AV A+L VE+TH+NLND T AGL + +L
Sbjct: 289 KFGHRGLNQPCGLRQ--QVEITSQNHGFAVQEASLNPQVEITHLNLNDRTVAGLKHKSLP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+D +F FV+LM+ K
Sbjct: 347 FFSVQYHPEASPGPHDADYLFAKFVDLMRQAK 378
>gi|163843737|ref|YP_001628141.1| carbamoyl phosphate synthase small subunit [Brucella suis ATCC
23445]
gi|226700905|sp|B0CHS0.1|CARA_BRUSI RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|163674460|gb|ABY38571.1| carbamoyl-phosphate synthase, small subunit [Brucella suis ATCC
23445]
Length = 407
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+ VE TH++L DGT GL V
Sbjct: 306 GHHGANHPVKDYTTGKVEIVSMNHGFAVDSDSLPENVEETHVSLFDGTNCGLRVVGKPVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR F+ L++ K +A
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINLIRERKGQA 398
>gi|428306656|ref|YP_007143481.1| carbamoyl-phosphate synthase small subunit [Crinalium epipsammum
PCC 9333]
gi|428248191|gb|AFZ13971.1| carbamoyl-phosphate synthase small subunit [Crinalium epipsammum
PCC 9333]
Length = 383
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHP Q +VEI++QNH +A+ +L K VE+TH+NLND T AGL + +L
Sbjct: 290 KFGHRGLNHPAGLKQ--QVEITSQNHGFAITAESLDKNVEITHLNLNDHTVAGLRHKSLP 347
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
S+QYH EASPGP D+D +F F++ M+
Sbjct: 348 FFSVQYHPEASPGPHDADYLFGQFIQTMR 376
>gi|261222623|ref|ZP_05936904.1| carbamoyl-phosphate synthase small subunit [Brucella ceti B1/94]
gi|265998588|ref|ZP_06111145.1| carbamoyl-phosphate synthase subunit small [Brucella ceti
M490/95/1]
gi|260921207|gb|EEX87860.1| carbamoyl-phosphate synthase small subunit [Brucella ceti B1/94]
gi|262553212|gb|EEZ09046.1| carbamoyl-phosphate synthase subunit small [Brucella ceti
M490/95/1]
Length = 407
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+ VE TH++L DGT GL V
Sbjct: 306 GHHGANHPVKDYTTGKVEIVSMNHGFAVDSDSLPENVEETHVSLFDGTNCGLRVVGKPVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR F+ L++ K +A
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINLIRERKGQA 398
>gi|261752775|ref|ZP_05996484.1| carbamoyl-phosphate synthase subunit small [Brucella suis bv. 5
str. 513]
gi|261742528|gb|EEY30454.1| carbamoyl-phosphate synthase subunit small [Brucella suis bv. 5
str. 513]
Length = 407
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+ VE TH++L DGT GL V
Sbjct: 306 GHHGANHPVKDYTTGKVEIVSMNHGFAVDSDSLPENVEETHVSLFDGTNCGLRVVGKPVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR F+ L++ K +A
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINLIRERKGQA 398
>gi|210135396|ref|YP_002301835.1| carbamoyl phosphate synthase small subunit [Helicobacter pylori
P12]
gi|210133364|gb|ACJ08355.1| carbamoyl-phosphate synthetase small chain [Helicobacter pylori
P12]
Length = 375
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEEIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|225621307|ref|YP_002722565.1| carbamoyl phosphate synthase small subunit [Brachyspira
hyodysenteriae WA1]
gi|225216127|gb|ACN84861.1| carbamoyl phosphate synthase small subunit [Brachyspira
hyodysenteriae WA1]
Length = 361
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV +++ +V I++QNH+YAV+ +L + +THI+LNDG+C G+ +
Sbjct: 264 KFGHRGGNHPVKDLETNKVSITSQNHSYAVEKESLANTDLILTHISLNDGSCEGVKHKKY 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
V S+QYH E++PGP+DS +F F ++M +
Sbjct: 324 PVFSVQYHPESNPGPEDSKYLFDKFTDMMNN 354
>gi|357023617|ref|ZP_09085799.1| carbamoyl phosphate synthase small subunit [Mesorhizobium amorphae
CCNWGS0123]
gi|355544469|gb|EHH13563.1| carbamoyl phosphate synthase small subunit [Mesorhizobium amorphae
CCNWGS0123]
Length = 402
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 61/90 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP GVE TH++L DG+ G+A V
Sbjct: 304 GHHGANHPVKDHTTGKVEIVSMNHGFAVDADSLPDGVEETHVSLFDGSNCGIALTGRPVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +FR FV L++ +
Sbjct: 364 SVQHHPEASPGPQDSHYLFRRFVNLIREKR 393
>gi|225627928|ref|ZP_03785964.1| carbamoyl-phosphate synthase, small subunit [Brucella ceti str.
Cudo]
gi|225617091|gb|EEH14137.1| carbamoyl-phosphate synthase, small subunit [Brucella ceti str.
Cudo]
Length = 422
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+ VE TH++L DGT GL V
Sbjct: 321 GHHGANHPVKDYTTGKVEIVSMNHGFAVDSDSLPENVEETHVSLFDGTNCGLRVVGKPVF 380
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR F+ L++ K +A
Sbjct: 381 SVQHHPEASPGPQDSHYLFRRFINLIRERKGQA 413
>gi|456012721|gb|EMF46409.1| Carbamoyl-phosphate synthase small chain [Planococcus
halocryophilus Or1]
Length = 371
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 66/96 (68%), Gaps = 7/96 (7%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLA---Y 56
KFGH GGNHPV ++ G++EI++QNH YAVD TL ++VTH LNDGT GL Y
Sbjct: 273 KFGHRGGNHPVRDLVTGKIEITSQNHGYAVDEDTLQGTRLKVTHSALNDGTNEGLTHLDY 332
Query: 57 PALNVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
PA V QYH E+SPGP+DS+ +F F+++M + +
Sbjct: 333 PAFTV---QYHPESSPGPEDSNYLFDRFIDVMNATR 365
>gi|429087843|ref|ZP_19150575.1| Carbamoyl-phosphate synthase small chain [Cronobacter universalis
NCTC 9529]
gi|426507646|emb|CCK15687.1| Carbamoyl-phosphate synthase small chain [Cronobacter universalis
NCTC 9529]
Length = 347
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N RV I+AQNH +AVD AT+P + VTH +L D T G+
Sbjct: 252 KFGHHGGNHPVKDIDNNRVMITAQNHGFAVDEATMPSTLRVTHKSLFDNTLQGIHRTDKP 311
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 312 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 346
>gi|91788541|ref|YP_549493.1| carbamoyl phosphate synthase small subunit [Polaromonas sp. JS666]
gi|91697766|gb|ABE44595.1| carbamoyl-phosphate synthase small subunit [Polaromonas sp. JS666]
Length = 401
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/89 (51%), Positives = 56/89 (62%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ NGRV I++QNH +AVD +LP + THI+L DGT GLA
Sbjct: 305 KFGHHGANHPVKDLDNGRVSITSQNHGFAVDEKSLPANLRPTHISLFDGTLQGLARTDKP 364
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
Q H EASPGP D +F F LM+
Sbjct: 365 AFCFQGHPEASPGPHDISYLFDRFTALME 393
>gi|379009297|ref|YP_005267110.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Wigglesworthia glossinidia
endosymbiont of Glossina morsitans morsitans (Yale
colony)]
gi|375157821|gb|AFA40887.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Wigglesworthia glossinidia
endosymbiont of Glossina morsitans morsitans (Yale
colony)]
Length = 378
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/89 (44%), Positives = 63/89 (70%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV +++ ++ I++QNH++AVDP TL K + +THI++ DGT G+ +
Sbjct: 281 KFGHHGTNHPVKDLKKNKIIITSQNHDFAVDPKTLSKNMMITHISMFDGTLQGIQFINKP 340
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S Q H E+ PGP D+ +F+ F++L++
Sbjct: 341 VFSFQGHPESGPGPQDALFLFKKFIDLIE 369
>gi|384211848|ref|YP_005600930.1| carbamoyl-phosphate synthase small subunit [Brucella melitensis
M5-90]
gi|384408957|ref|YP_005597578.1| carbamoyl-phosphate synthase small subunit [Brucella melitensis
M28]
gi|326409504|gb|ADZ66569.1| carbamoyl-phosphate synthase small subunit [Brucella melitensis
M28]
gi|326539211|gb|ADZ87426.1| carbamoyl-phosphate synthase, small subunit [Brucella melitensis
M5-90]
Length = 407
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+ VE TH++L DGT GL V
Sbjct: 306 GHHGANHPVKDYTTGKVEIVSMNHGFAVDSDSLPENVEETHVSLFDGTNCGLRVVGKPVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR F+ L++ K +A
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINLIRERKGQA 398
>gi|58427105|gb|AAW76142.1| carbamoyl-phosphate synthase small chain [Xanthomonas oryzae pv.
oryzae KACC 10331]
Length = 421
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 57/88 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ GRV I++QNH +AVD +TLP V VTH +L DGT G+A
Sbjct: 332 GHHGANHPVQDLDGGRVMITSQNHGFAVDESTLPANVRVTHRSLFDGTNQGIALTDAPAF 391
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D +F FV+LM +
Sbjct: 392 SFQGHPEASPGPRDVGPLFDRFVDLMAA 419
>gi|237815878|ref|ZP_04594875.1| carbamoyl-phosphate synthase, small subunit [Brucella abortus str.
2308 A]
gi|17982442|gb|AAL51707.1| carbamoyl-phosphate synthase small chain [Brucella melitensis bv. 1
str. 16M]
gi|237789176|gb|EEP63387.1| carbamoyl-phosphate synthase, small subunit [Brucella abortus str.
2308 A]
Length = 422
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+ VE TH++L DGT GL V
Sbjct: 321 GHHGANHPVKDYTTGKVEIVSMNHGFAVDSDSLPENVEETHVSLFDGTNCGLRVVGKPVF 380
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR F+ L++ K +A
Sbjct: 381 SVQHHPEASPGPQDSHYLFRRFINLIRERKGQA 413
>gi|220934151|ref|YP_002513050.1| carbamoyl-phosphate synthase, small subunit [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|254813552|sp|B8GNX4.1|CARA_THISH RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|219995461|gb|ACL72063.1| carbamoyl-phosphate synthase, small subunit [Thioalkalivibrio
sulfidophilus HL-EbGr7]
Length = 379
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 59/94 (62%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ + RV IS+QNH +AVD TLP V+ TH +L DGT G+A
Sbjct: 285 KFGHHGANHPVQDLDSKRVMISSQNHGFAVDENTLPGNVKATHRSLFDGTLQGIARTDRP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S Q H EASPGP D +F F+ELMK R
Sbjct: 345 AFSFQGHPEASPGPHDVAPLFDRFIELMKPQGVR 378
>gi|205373298|ref|ZP_03226102.1| carbamoyl phosphate synthase small subunit [Bacillus coahuilensis
m4-4]
Length = 363
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/90 (46%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G N PV +++ G+V +++QNH ++VD +L G+EVTHI LND + GL +
Sbjct: 265 KFGHRGANQPVKDLRTGKVALTSQNHGFSVDQDSLEGTGLEVTHIALNDQSIEGLTHTKY 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++QYH EASPGP+D++ +F DF++LM+
Sbjct: 325 PAFTVQYHPEASPGPEDANTLFNDFLDLME 354
>gi|23502352|ref|NP_698479.1| carbamoyl phosphate synthase small subunit [Brucella suis 1330]
gi|161619431|ref|YP_001593318.1| carbamoyl phosphate synthase small subunit [Brucella canis ATCC
23365]
gi|260566015|ref|ZP_05836485.1| carbamoyl-phosphate synthase small subunit [Brucella suis bv. 4
str. 40]
gi|261755434|ref|ZP_05999143.1| carbamoyl-phosphate synthase subunit small [Brucella suis bv. 3
str. 686]
gi|376275905|ref|YP_005116344.1| carbamoyl-phosphate synthase small subunit [Brucella canis HSK
A52141]
gi|376281144|ref|YP_005155150.1| carbamoyl phosphate synthase small subunit [Brucella suis VBI22]
gi|384225138|ref|YP_005616302.1| carbamoyl phosphate synthase small subunit [Brucella suis 1330]
gi|31563005|sp|Q8FZJ8.1|CARA_BRUSU RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|226700903|sp|A9M6F1.1|CARA_BRUC2 RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|23348333|gb|AAN30394.1| carbamoyl-phosphate synthase, small subunit [Brucella suis 1330]
gi|161336242|gb|ABX62547.1| carbamoyl-phosphate synthase, small subunit [Brucella canis ATCC
23365]
gi|260155533|gb|EEW90613.1| carbamoyl-phosphate synthase small subunit [Brucella suis bv. 4
str. 40]
gi|261745187|gb|EEY33113.1| carbamoyl-phosphate synthase subunit small [Brucella suis bv. 3
str. 686]
gi|343383318|gb|AEM18810.1| carbamoyl phosphate synthase small subunit [Brucella suis 1330]
gi|358258743|gb|AEU06478.1| carbamoyl phosphate synthase small subunit [Brucella suis VBI22]
gi|363404472|gb|AEW14767.1| carbamoyl-phosphate synthase, small subunit [Brucella canis HSK
A52141]
Length = 407
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+ VE TH++L DGT GL V
Sbjct: 306 GHHGANHPVKDYTTGKVEIVSMNHGFAVDSDSLPENVEETHVSLFDGTNCGLRVVGKPVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR F+ L++ K +A
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINLIRERKGQA 398
>gi|414076049|ref|YP_006995367.1| carbamoyl-phosphate synthase small subunit [Anabaena sp. 90]
gi|413969465|gb|AFW93554.1| carbamoyl-phosphate synthase small subunit [Anabaena sp. 90]
Length = 385
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G N P +Q RVEI++QNH++A+DP +LP VEV+H+NLND T AG+ + L
Sbjct: 290 KFGHRGLNQPA-GLQT-RVEITSQNHSFALDPDSLPTATVEVSHLNLNDLTVAGVRHKTL 347
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
V S+QYH EASPGP D+D +F FV M++ + A
Sbjct: 348 PVFSVQYHPEASPGPHDADYLFEQFVLKMQAARQGA 383
>gi|168205837|ref|ZP_02631842.1| carbamoyl-phosphate synthase, small subunit [Clostridium
perfringens E str. JGS1987]
gi|170662739|gb|EDT15422.1| carbamoyl-phosphate synthase, small subunit [Clostridium
perfringens E str. JGS1987]
Length = 349
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV ++ N RV I++QNH Y V ATLP+ +E+TH+++NDGT G+ + L
Sbjct: 263 KFGHRGCNHPVKDLINNRVHITSQNHGYYV--ATLPENMEITHVSMNDGTVEGMKHKELP 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
+ S+Q+H EA PGP DS+ +F +F++
Sbjct: 321 IFSVQFHPEACPGPKDSEYIFDEFMK 346
>gi|410866065|ref|YP_006980676.1| Carbamoyl-phosphate synthase, small subunit [Propionibacterium
acidipropionici ATCC 4875]
gi|410822706|gb|AFV89321.1| Carbamoyl-phosphate synthase, small subunit [Propionibacterium
acidipropionici ATCC 4875]
Length = 388
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/90 (46%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPALN 60
FGH G NHPV +++ GR++ ++QNH +AVDP ++P +EVT I LNDGT G+ + L
Sbjct: 266 FGHRGFNHPVKDLRTGRIDFTSQNHGFAVDPESIPGTELEVTQIELNDGTVEGIRHTRLP 325
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
+S+QYH +A+ GP D++ +F DF+ LM +
Sbjct: 326 AISVQYHPDAAAGPHDAEHIFDDFIGLMDA 355
>gi|420466017|ref|ZP_14964780.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
H-6]
gi|393079565|gb|EJB80297.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
H-6]
Length = 375
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEEIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|389842279|ref|YP_006344363.1| carbamoyl phosphate synthase small subunit [Cronobacter sakazakii
ES15]
gi|387852755|gb|AFK00853.1| carbamoyl phosphate synthase small subunit [Cronobacter sakazakii
ES15]
Length = 347
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N RV I+AQNH +AVD AT+P + VTH +L D T G+
Sbjct: 252 KFGHHGGNHPVKDIDNNRVMITAQNHGFAVDEATMPSTLRVTHKSLFDNTLQGIHRTDKP 311
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 312 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 346
>gi|349685581|ref|ZP_08896723.1| carbamoyl phosphate synthase small subunit [Gluconacetobacter
oboediens 174Bp2]
Length = 465
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/93 (47%), Positives = 59/93 (63%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G N PV ++ G+VEI++QNH +AVD +LP V TH +L DG+ G+A
Sbjct: 373 GHRGANQPVKDLATGKVEITSQNHGFAVDDKSLPDDVRATHTSLFDGSNEGIATSRYPAF 432
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EASPGP DS +FR FV+L+ + A
Sbjct: 433 SVQYHPEASPGPSDSHYLFRRFVDLIDTTTKTA 465
>gi|429108095|ref|ZP_19169964.1| Carbamoyl-phosphate synthase small chain [Cronobacter malonaticus
681]
gi|426294818|emb|CCJ96077.1| Carbamoyl-phosphate synthase small chain [Cronobacter malonaticus
681]
Length = 347
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N RV I+AQNH +AVD AT+P + VTH +L D T G+
Sbjct: 252 KFGHHGGNHPVKDIDNNRVMITAQNHGFAVDEATMPSTLRVTHKSLFDNTLQGIHRTDKP 311
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 312 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 346
>gi|62290374|ref|YP_222167.1| carbamoyl phosphate synthase small subunit [Brucella abortus bv. 1
str. 9-941]
gi|82700296|ref|YP_414870.1| carbamoyl phosphate synthase small subunit [Brucella melitensis
biovar Abortus 2308]
gi|148560438|ref|YP_001259368.1| carbamoyl phosphate synthase small subunit [Brucella ovis ATCC
25840]
gi|161511156|ref|NP_539443.2| carbamoyl phosphate synthase small subunit [Brucella melitensis bv.
1 str. 16M]
gi|189024602|ref|YP_001935370.1| carbamoyl phosphate synthase small subunit [Brucella abortus S19]
gi|225852965|ref|YP_002733198.1| carbamoyl phosphate synthase small subunit [Brucella melitensis
ATCC 23457]
gi|256263557|ref|ZP_05466089.1| carbamoyl-phosphate synthase small subunit [Brucella melitensis bv.
2 str. 63/9]
gi|260546913|ref|ZP_05822652.1| carbamoyl-phosphate synthase small subunit [Brucella abortus NCTC
8038]
gi|260565291|ref|ZP_05835775.1| carbamoyl-phosphate synthase small subunit [Brucella melitensis bv.
1 str. 16M]
gi|260755204|ref|ZP_05867552.1| carbamoyl-phosphate synthetase glutamine [Brucella abortus bv. 6
str. 870]
gi|260758424|ref|ZP_05870772.1| carbamoyl-phosphate synthetase glutamine [Brucella abortus bv. 4
str. 292]
gi|260762250|ref|ZP_05874593.1| carbamoyl-phosphate synthetase glutamine [Brucella abortus bv. 2
str. 86/8/59]
gi|260884219|ref|ZP_05895833.1| carbamoyl-phosphate synthase small subunit [Brucella abortus bv. 9
str. C68]
gi|261214467|ref|ZP_05928748.1| carbamoyl-phosphate synthetase glutamine [Brucella abortus bv. 3
str. Tulya]
gi|261219613|ref|ZP_05933894.1| carbamoyl-phosphate synthase subunit small [Brucella ceti M13/05/1]
gi|261316042|ref|ZP_05955239.1| carbamoyl-phosphate synthase subunit small [Brucella pinnipedialis
M163/99/10]
gi|261318095|ref|ZP_05957292.1| carbamoyl-phosphate synthase subunit small [Brucella pinnipedialis
B2/94]
gi|261322501|ref|ZP_05961698.1| carbamoyl-phosphate synthase subunit small [Brucella ceti
M644/93/1]
gi|261758664|ref|ZP_06002373.1| carbamoyl-phosphate synthase subunit small [Brucella sp. F5/99]
gi|265989127|ref|ZP_06101684.1| carbamoyl-phosphate synthase subunit small [Brucella pinnipedialis
M292/94/1]
gi|265991540|ref|ZP_06104097.1| carbamoyl-phosphate synthase subunit small [Brucella melitensis bv.
1 str. Rev.1]
gi|265995378|ref|ZP_06107935.1| carbamoyl-phosphate synthase small subunit [Brucella melitensis bv.
3 str. Ether]
gi|294852803|ref|ZP_06793476.1| carbamoyl-phosphate synthase [Brucella sp. NVSL 07-0026]
gi|297248760|ref|ZP_06932478.1| carbamoyl-phosphate synthase, small subunit [Brucella abortus bv. 5
str. B3196]
gi|340791092|ref|YP_004756557.1| carbamoyl-phosphate synthase, small subunit [Brucella pinnipedialis
B2/94]
gi|376272785|ref|YP_005151363.1| carbamoyl-phosphate synthase small subunit [Brucella abortus
A13334]
gi|384445519|ref|YP_005604238.1| carbamoyl-phosphate synthase small subunit [Brucella melitensis NI]
gi|423166446|ref|ZP_17153149.1| carbamoyl-phosphate synthase small chain [Brucella abortus bv. 1
str. NI435a]
gi|423171179|ref|ZP_17157854.1| carbamoyl-phosphate synthase small chain [Brucella abortus bv. 1
str. NI474]
gi|423172739|ref|ZP_17159410.1| carbamoyl-phosphate synthase small chain [Brucella abortus bv. 1
str. NI486]
gi|423178568|ref|ZP_17165212.1| carbamoyl-phosphate synthase small chain [Brucella abortus bv. 1
str. NI488]
gi|423180609|ref|ZP_17167250.1| carbamoyl-phosphate synthase small chain [Brucella abortus bv. 1
str. NI010]
gi|423183741|ref|ZP_17170378.1| carbamoyl-phosphate synthase small chain [Brucella abortus bv. 1
str. NI016]
gi|423185319|ref|ZP_17171933.1| carbamoyl-phosphate synthase small chain [Brucella abortus bv. 1
str. NI021]
gi|423188454|ref|ZP_17175064.1| carbamoyl-phosphate synthase small chain [Brucella abortus bv. 1
str. NI259]
gi|21759033|sp|Q8YIB8.2|CARA_BRUME RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|75496492|sp|Q57C28.1|CARA_BRUAB RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|123546277|sp|Q2YM22.1|CARA_BRUA2 RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|226700902|sp|B2S6U9.1|CARA_BRUA1 RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|226700904|sp|A5VRM1.1|CARA_BRUO2 RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|254813549|sp|C0REC2.1|CARA_BRUMB RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|62196506|gb|AAX74806.1| CarA, carbamoyl-phosphate synthase, small subunit [Brucella abortus
bv. 1 str. 9-941]
gi|82616397|emb|CAJ11458.1| Glutamine amidotransferase class-I:Carbamoyl-phosphate synthase,
GATase domain:Carbamoyl-phosphate synthase, small
chain:Anth [Brucella melitensis biovar Abortus 2308]
gi|148371695|gb|ABQ61674.1| carbamoyl-phosphate synthase, small subunit [Brucella ovis ATCC
25840]
gi|189020174|gb|ACD72896.1| carbamoyl-phosphate synthase small subunit [Brucella abortus S19]
gi|225641330|gb|ACO01244.1| carbamoyl-phosphate synthase, small subunit [Brucella melitensis
ATCC 23457]
gi|260095963|gb|EEW79840.1| carbamoyl-phosphate synthase small subunit [Brucella abortus NCTC
8038]
gi|260151359|gb|EEW86453.1| carbamoyl-phosphate synthase small subunit [Brucella melitensis bv.
1 str. 16M]
gi|260668742|gb|EEX55682.1| carbamoyl-phosphate synthetase glutamine [Brucella abortus bv. 4
str. 292]
gi|260672682|gb|EEX59503.1| carbamoyl-phosphate synthetase glutamine [Brucella abortus bv. 2
str. 86/8/59]
gi|260675312|gb|EEX62133.1| carbamoyl-phosphate synthetase glutamine [Brucella abortus bv. 6
str. 870]
gi|260873747|gb|EEX80816.1| carbamoyl-phosphate synthase small subunit [Brucella abortus bv. 9
str. C68]
gi|260916074|gb|EEX82935.1| carbamoyl-phosphate synthetase glutamine [Brucella abortus bv. 3
str. Tulya]
gi|260924702|gb|EEX91270.1| carbamoyl-phosphate synthase subunit small [Brucella ceti M13/05/1]
gi|261295191|gb|EEX98687.1| carbamoyl-phosphate synthase subunit small [Brucella ceti
M644/93/1]
gi|261297318|gb|EEY00815.1| carbamoyl-phosphate synthase subunit small [Brucella pinnipedialis
B2/94]
gi|261305068|gb|EEY08565.1| carbamoyl-phosphate synthase subunit small [Brucella pinnipedialis
M163/99/10]
gi|261738648|gb|EEY26644.1| carbamoyl-phosphate synthase subunit small [Brucella sp. F5/99]
gi|262766491|gb|EEZ12280.1| carbamoyl-phosphate synthase small subunit [Brucella melitensis bv.
3 str. Ether]
gi|263002324|gb|EEZ14899.1| carbamoyl-phosphate synthase subunit small [Brucella melitensis bv.
1 str. Rev.1]
gi|263093585|gb|EEZ17610.1| carbamoyl-phosphate synthase small subunit [Brucella melitensis bv.
2 str. 63/9]
gi|264661324|gb|EEZ31585.1| carbamoyl-phosphate synthase subunit small [Brucella pinnipedialis
M292/94/1]
gi|294821392|gb|EFG38391.1| carbamoyl-phosphate synthase [Brucella sp. NVSL 07-0026]
gi|297175929|gb|EFH35276.1| carbamoyl-phosphate synthase, small subunit [Brucella abortus bv. 5
str. B3196]
gi|340559551|gb|AEK54789.1| carbamoyl-phosphate synthase, small subunit [Brucella pinnipedialis
B2/94]
gi|349743508|gb|AEQ09051.1| carbamoyl-phosphate synthase, small subunit [Brucella melitensis
NI]
gi|363400391|gb|AEW17361.1| carbamoyl-phosphate synthase, small subunit [Brucella abortus
A13334]
gi|374538513|gb|EHR10021.1| carbamoyl-phosphate synthase small chain [Brucella abortus bv. 1
str. NI474]
gi|374543930|gb|EHR15408.1| carbamoyl-phosphate synthase small chain [Brucella abortus bv. 1
str. NI435a]
gi|374544258|gb|EHR15735.1| carbamoyl-phosphate synthase small chain [Brucella abortus bv. 1
str. NI486]
gi|374545349|gb|EHR16812.1| carbamoyl-phosphate synthase small chain [Brucella abortus bv. 1
str. NI488]
gi|374548140|gb|EHR19592.1| carbamoyl-phosphate synthase small chain [Brucella abortus bv. 1
str. NI010]
gi|374548569|gb|EHR20017.1| carbamoyl-phosphate synthase small chain [Brucella abortus bv. 1
str. NI016]
gi|374559016|gb|EHR30405.1| carbamoyl-phosphate synthase small chain [Brucella abortus bv. 1
str. NI259]
gi|374560029|gb|EHR31412.1| carbamoyl-phosphate synthase small chain [Brucella abortus bv. 1
str. NI021]
Length = 407
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+ VE TH++L DGT GL V
Sbjct: 306 GHHGANHPVKDYTTGKVEIVSMNHGFAVDSDSLPENVEETHVSLFDGTNCGLRVVGKPVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR F+ L++ K +A
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINLIRERKGQA 398
>gi|330993913|ref|ZP_08317843.1| Carbamoyl-phosphate synthase small chain [Gluconacetobacter sp.
SXCC-1]
gi|329758859|gb|EGG75373.1| Carbamoyl-phosphate synthase small chain [Gluconacetobacter sp.
SXCC-1]
Length = 465
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/93 (47%), Positives = 60/93 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G N PV ++ G+VEI++QNH +AVD +LP+ V TH +L DG+ G+A
Sbjct: 373 GHRGANQPVKDLATGKVEITSQNHGFAVDDKSLPEDVHATHTSLFDGSNEGIATSRYPAF 432
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EASPGP DS +FR FV+L+ + A
Sbjct: 433 SVQYHPEASPGPSDSHYLFRRFVDLIDTTTKTA 465
>gi|420476113|ref|ZP_14974780.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
H-21]
gi|393090020|gb|EJB90654.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
H-21]
Length = 375
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEEIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
++S+Q+H E+SPGP +S +F++FVEL++S
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLES 374
>gi|350544015|ref|ZP_08913681.1| Carbamoyl-phosphate synthase small chain [Candidatus Burkholderia
kirkii UZHbot1]
gi|350528204|emb|CCD36239.1| Carbamoyl-phosphate synthase small chain [Candidatus Burkholderia
kirkii UZHbot1]
Length = 380
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 62/95 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K GHHG NHPV ++++GRV I++QNH +AV+ +TLP +VTH++L DGT G A
Sbjct: 286 KMGHHGANHPVKDMEDGRVVITSQNHGFAVEASTLPANTKVTHVSLFDGTLQGFALTDKP 345
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
Q H EASPGP D +F F++LM++ K A
Sbjct: 346 AFCFQGHPEASPGPHDIAYLFDRFIKLMETAKVAA 380
>gi|289663387|ref|ZP_06484968.1| carbamoyl phosphate synthase small subunit [Xanthomonas campestris
pv. vasculorum NCPPB 702]
gi|289668841|ref|ZP_06489916.1| carbamoyl phosphate synthase small subunit [Xanthomonas campestris
pv. musacearum NCPPB 4381]
Length = 377
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 48/93 (51%), Positives = 57/93 (61%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ GRV I++QNH +AVD +TLP V VTH +L DGT G+A
Sbjct: 285 GHHGANHPVQDLDGGRVMITSQNHGFAVDESTLPANVRVTHRSLFDGTNQGIALTDAPAF 344
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D +F FV LM RA
Sbjct: 345 SFQGHPEASPGPRDVGPLFDRFVALMAKDANRA 377
>gi|262197130|ref|YP_003268339.1| carbamoyl-phosphate synthase small subunit [Haliangium ochraceum
DSM 14365]
gi|262080477|gb|ACY16446.1| carbamoyl-phosphate synthase, small subunit [Haliangium ochraceum
DSM 14365]
Length = 408
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/91 (50%), Positives = 58/91 (63%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGHHGGNHPV ++ + R+EISA NH +AV +LP+ V TH NL D T G+ V
Sbjct: 311 FGHHGGNHPVQDLASKRIEISAHNHGFAVAEDSLPETVRCTHRNLYDDTVEGIELVGAPV 370
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+QYH EASPGP D+ VF FV+ M S +
Sbjct: 371 FGIQYHPEASPGPHDALGVFDRFVDAMASAQ 401
>gi|426402816|ref|YP_007021787.1| carbamoyl phosphate synthase small subunit [Bdellovibrio
bacteriovorus str. Tiberius]
gi|425859484|gb|AFY00520.1| carbamoyl phosphate synthase small subunit [Bdellovibrio
bacteriovorus str. Tiberius]
Length = 349
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 41/88 (46%), Positives = 58/88 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHP+ + ++ +++QNH YAV+ A+LP V+VTH+NLNDGT AG
Sbjct: 261 KFGHRGSNHPIRDTLLNQIYMTSQNHGYAVEEASLPSDVKVTHVNLNDGTVAGFYSEKRK 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
+ +QYH E+ PGP ++ +F FVE M
Sbjct: 321 CLGIQYHPESCPGPHEASGLFSYFVERM 348
>gi|86608712|ref|YP_477474.1| carbamoyl phosphate synthase small subunit [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557254|gb|ABD02211.1| carbamoyl-phosphate synthase, small subunit [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 395
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 3/95 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHP + +VEI++QNH +AVD ++P GV +T++NLND T AG+ + L
Sbjct: 303 KFGHRGLNHPCG--LDKQVEITSQNHGFAVDADSIPADGVVITYLNLNDRTVAGIRHRHL 360
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
+ S+QYH EASPGP D+D +FR+FVELM + R
Sbjct: 361 PLFSVQYHPEASPGPHDADHLFREFVELMLQHRSR 395
>gi|425471155|ref|ZP_18850015.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9701]
gi|389883015|emb|CCI36578.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9701]
Length = 382
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P Q +VEI++QNH +AV A+L VE+TH+NLND T AGL + +L
Sbjct: 289 KFGHRGLNQPCGLQQ--QVEITSQNHGFAVQEASLNPQVEITHLNLNDRTVAGLKHKSLP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+D +F FV+LM+ K
Sbjct: 347 FFSVQYHPEASPGPHDADYLFGQFVDLMRQAK 378
>gi|334123502|ref|ZP_08497527.1| carbamoyl-phosphate synthase, small subunit [Enterobacter
hormaechei ATCC 49162]
gi|333390711|gb|EGK61843.1| carbamoyl-phosphate synthase, small subunit [Enterobacter
hormaechei ATCC 49162]
Length = 391
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD AT+P + VTH +L DGT G+
Sbjct: 296 KFGHHGGNHPVKDIDNNTVMITAQNHGFAVDEATMPANLRVTHKSLFDGTLQGIHRTDKP 355
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 356 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 390
>gi|295098558|emb|CBK87648.1| carbamoyl-phosphate synthase, small subunit [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 347
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD AT+P + VTH +L DGT G+
Sbjct: 252 KFGHHGGNHPVKDIDNNTVMITAQNHGFAVDEATMPANLRVTHKSLFDGTLQGIHRTDKP 311
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 312 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 346
>gi|390992141|ref|ZP_10262385.1| carbamoyl-phosphate synthase, small subunit [Xanthomonas axonopodis
pv. punicae str. LMG 859]
gi|372553136|emb|CCF69360.1| carbamoyl-phosphate synthase, small subunit [Xanthomonas axonopodis
pv. punicae str. LMG 859]
Length = 391
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 57/88 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ GRV I++QNH +AVD +TLP V VTH +L DGT G+A
Sbjct: 302 GHHGANHPVQDLDGGRVMITSQNHGFAVDESTLPANVRVTHRSLFDGTNQGIALTDAPAF 361
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D +F FV+LM +
Sbjct: 362 SFQGHPEASPGPRDVGPLFDRFVDLMAA 389
>gi|121604676|ref|YP_982005.1| carbamoyl phosphate synthase small subunit [Polaromonas
naphthalenivorans CJ2]
gi|120593645|gb|ABM37084.1| carbamoyl-phosphate synthase small subunit [Polaromonas
naphthalenivorans CJ2]
Length = 393
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/94 (48%), Positives = 57/94 (60%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ GRV I++QNH +AVD TLP + THI+L DGT GLA
Sbjct: 297 KFGHHGANHPVKDMDTGRVSITSQNHGFAVDETTLPANLRPTHISLFDGTLQGLARTDKP 356
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
Q H EASPGP D +F F LM+ + +
Sbjct: 357 AFCFQGHPEASPGPHDISYLFDRFTTLMEQAQEK 390
>gi|427430773|ref|ZP_18920487.1| Carbamoyl-phosphate synthase small chain [Caenispirillum salinarum
AK4]
gi|425878264|gb|EKV26981.1| Carbamoyl-phosphate synthase small chain [Caenispirillum salinarum
AK4]
Length = 391
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/90 (47%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G N PV +++ G+VEI++QNH + VD A+LP GV TH++L D + G+A +
Sbjct: 301 GHRGSNQPVKDLKTGKVEITSQNHGFGVDRASLPAGVVETHVSLFDNSVEGIAVDGKPIF 360
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F+ F +LM K
Sbjct: 361 SVQYHPEASPGPQDSHYLFKRFTDLMDEAK 390
>gi|435853651|ref|YP_007314970.1| carbamoyl-phosphate synthase, small subunit [Halobacteroides
halobius DSM 5150]
gi|433670062|gb|AGB40877.1| carbamoyl-phosphate synthase, small subunit [Halobacteroides
halobius DSM 5150]
Length = 357
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV ++ RV I++QNH +A+ ++ +EVTHIN+ND T G+ +
Sbjct: 269 KFGHRGANHPVKDLATKRVYITSQNHGFAIKADSVADLDLEVTHININDNTVEGIKHKEY 328
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
V S+QYH EASPGP+DS +F +F+ELM
Sbjct: 329 PVFSVQYHPEASPGPEDSHYLFDEFIELM 357
>gi|261325547|ref|ZP_05964744.1| carbamoyl-phosphate synthase small subunit [Brucella neotomae 5K33]
gi|261301527|gb|EEY05024.1| carbamoyl-phosphate synthase small subunit [Brucella neotomae 5K33]
Length = 407
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+ VE TH++L DGT GL V
Sbjct: 306 GHHGANHPVKDYTTGKVEIVSMNHGFAVDSDSLPENVEETHVSLFDGTNCGLRVVGKPVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR F+ L++ K +A
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINLIRERKGQA 398
>gi|265984530|ref|ZP_06097265.1| carbamoyl-phosphate synthase subunit small [Brucella sp. 83/13]
gi|306837286|ref|ZP_07470170.1| carbamoyl-phosphate synthase, small subunit [Brucella sp. NF 2653]
gi|264663122|gb|EEZ33383.1| carbamoyl-phosphate synthase subunit small [Brucella sp. 83/13]
gi|306407629|gb|EFM63824.1| carbamoyl-phosphate synthase, small subunit [Brucella sp. NF 2653]
Length = 407
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVD +LP+ VE TH++L DGT GL V
Sbjct: 306 GHHGANHPVKDYTTGKVEIVSMNHGFAVDSDSLPENVEETHVSLFDGTNCGLRVVGKPVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +FR F+ L++ K +A
Sbjct: 366 SVQHHPEASPGPQDSHYLFRRFINLIRERKGQA 398
>gi|443648571|ref|ZP_21130040.1| carbamoyl-phosphate synthase, small subunit [Microcystis aeruginosa
DIANCHI905]
gi|159029969|emb|CAO90348.1| carA [Microcystis aeruginosa PCC 7806]
gi|443335158|gb|ELS49637.1| carbamoyl-phosphate synthase, small subunit [Microcystis aeruginosa
DIANCHI905]
Length = 382
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P Q +VEI++QNH +AV A+L VE+TH+NLND T AGL + +L
Sbjct: 289 KFGHRGLNQPCGLQQ--QVEITSQNHGFAVQEASLNPQVEITHLNLNDRTVAGLKHKSLP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+D +F FV+LM+ K
Sbjct: 347 FFSVQYHPEASPGPHDADYLFGQFVDLMRQAK 378
>gi|420430971|ref|ZP_14929996.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
A-20]
gi|393045297|gb|EJB46282.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
A-20]
Length = 375
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLKTNAVEITAQNHNYCV-PEEIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|186681665|ref|YP_001864861.1| carbamoyl phosphate synthase small subunit [Nostoc punctiforme PCC
73102]
gi|186464117|gb|ACC79918.1| carbamoyl-phosphate synthase, small subunit [Nostoc punctiforme PCC
73102]
Length = 388
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 3/86 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGV-EVTHINLNDGTCAGLAYPAL 59
KFGH G N P Q RVEI++QNH++A+DP +LP V E++H+NLND T AG+ + +L
Sbjct: 290 KFGHRGLNQPAGLQQ--RVEITSQNHSFAIDPDSLPTAVVEISHLNLNDRTIAGVRHKSL 347
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFV 85
V S+QYH EASPGP D+D +F FV
Sbjct: 348 PVFSVQYHPEASPGPHDADYLFEQFV 373
>gi|149194998|ref|ZP_01872091.1| carbamoyl-phosphate synthase small subunit [Caminibacter
mediatlanticus TB-2]
gi|149134919|gb|EDM23402.1| carbamoyl-phosphate synthase small subunit [Caminibacter
mediatlanticus TB-2]
Length = 374
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 50/91 (54%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 1 KFGHHGGNHPVHNIQNGR--VEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPA 58
KFGHHGGNHPV N N + VEI+AQNHNY V P + + EVTHINL D T G+ Y
Sbjct: 285 KFGHHGGNHPVKNNLNKKPVVEITAQNHNYNV-PEGIKEIAEVTHINLFDNTIEGVKYKN 343
Query: 59 LNVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S+Q+H EASPGP DS +F++F ++K
Sbjct: 344 KPVFSVQHHPEASPGPHDSKYIFKEFYNIVK 374
>gi|56751979|ref|YP_172680.1| carbamoyl phosphate synthase small subunit [Synechococcus elongatus
PCC 6301]
gi|81561611|sp|Q5N0L0.1|CARA_SYNP6 RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|56686938|dbj|BAD80160.1| carbamoyl-phosphate synthase small chain [Synechococcus elongatus
PCC 6301]
Length = 391
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 50/89 (56%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHP Q +VEI+ QNH +A+ +L VEVTH+NLND T AGL + L
Sbjct: 297 KFGHRGLNHPCGLSQ--QVEITGQNHGFAIAADSLGPDVEVTHLNLNDRTVAGLRHRHLP 354
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S+QYH EASPGP DSD +F FV LM+
Sbjct: 355 VFSVQYHPEASPGPHDSDYLFEQFVALMR 383
>gi|399052203|ref|ZP_10741768.1| carbamoyl-phosphate synthase, small subunit [Brevibacillus sp.
CF112]
gi|433545640|ref|ZP_20501990.1| carbamoyl-phosphate synthase small chain [Brevibacillus agri
BAB-2500]
gi|398050069|gb|EJL42459.1| carbamoyl-phosphate synthase, small subunit [Brevibacillus sp.
CF112]
gi|432183038|gb|ELK40589.1| carbamoyl-phosphate synthase small chain [Brevibacillus agri
BAB-2500]
Length = 365
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV + GR I++QNH+YAV +L +E+THI LNDGT GL A
Sbjct: 264 KFGHRGGNHPVKELPTGRTYITSQNHSYAVKEDSLAGTELEITHIALNDGTVEGLRNRAK 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
N S+QYH EA+PGP DS +F F+ ++++ K
Sbjct: 324 NAFSVQYHPEAAPGPYDSGYLFDQFLAMLETAK 356
>gi|425446613|ref|ZP_18826616.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9443]
gi|389733092|emb|CCI03100.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9443]
Length = 382
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P Q +VEI++QNH +AV A+L VE+TH+NLND T AGL + +L
Sbjct: 289 KFGHRGLNQPCGLQQ--QVEITSQNHGFAVQEASLNPQVEITHLNLNDRTVAGLKHRSLP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+D +F FV+LM+ K
Sbjct: 347 FFSVQYHPEASPGPHDADYLFAKFVDLMRQAK 378
>gi|410665925|ref|YP_006918296.1| carbamoyl-phosphate synthase small subunit [Simiduia agarivorans
SA1 = DSM 21679]
gi|409028282|gb|AFV00567.1| carbamoyl-phosphate synthase small subunit [Simiduia agarivorans
SA1 = DSM 21679]
Length = 378
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 58/90 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++ N V I+AQNH +AVD A+LP + TH +L DG+ G+
Sbjct: 287 KFGHHGGNHPVQDLDNKTVMITAQNHGFAVDEASLPANLRATHKSLFDGSLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D+ +F FVELM +
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFVELMSA 376
>gi|425443355|ref|ZP_18823575.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9717]
gi|389715371|emb|CCI00251.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9717]
Length = 382
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P Q +VEI++QNH +AV A+L VE+TH+NLND T AGL + +L
Sbjct: 289 KFGHRGLNQPCGLRQ--QVEITSQNHGFAVQEASLNPQVEITHLNLNDRTVAGLKHRSLP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+D +F FV+LM+ K
Sbjct: 347 FFSVQYHPEASPGPHDADYLFAKFVDLMRQAK 378
>gi|366085949|ref|ZP_09452434.1| carbamoyl phosphate synthase small subunit [Lactobacillus zeae KCTC
3804]
Length = 360
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/95 (44%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
K+GH G NHPV I GR++ ++QNH YAVDP ++ P + VTH+ +NDGT GL +
Sbjct: 262 KYGHRGFNHPVREIATGRIDFTSQNHGYAVDPDSIDPDTLLVTHVEINDGTVEGLRHRLY 321
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
++Q+H +A+PGP D+D +F +F+E+M + R
Sbjct: 322 PAFTVQFHPDAAPGPHDADHLFDEFMEMMDAFSDR 356
>gi|420493138|ref|ZP_14991711.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
P-15]
gi|420526168|ref|ZP_15024569.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori Hp
P-15b]
gi|393105732|gb|EJC06279.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
P-15]
gi|393131473|gb|EJC31896.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori Hp
P-15b]
Length = 375
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEEIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|420409274|ref|ZP_14908425.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori
NQ4216]
gi|393022029|gb|EJB23158.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori
NQ4216]
Length = 375
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLKTNAVEITAQNHNYCV-PEEIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|258539665|ref|YP_003174164.1| carbamoyl phosphate synthase small subunit [Lactobacillus rhamnosus
Lc 705]
gi|257151341|emb|CAR90313.1| Carbamoyl-phosphate synthase, small subunit [Lactobacillus
rhamnosus Lc 705]
Length = 360
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/95 (44%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
K+GH G NHPV I GR++ ++QNH YAVDP ++ P + VTH+ +NDGT GL +
Sbjct: 262 KYGHRGFNHPVREIATGRIDFTSQNHGYAVDPDSIDPDTLLVTHVEINDGTVEGLRHRLY 321
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
++Q+H +A+PGP D+D +F +F+E+M + R
Sbjct: 322 PAFTVQFHPDAAPGPHDADHLFDEFMEMMDAFSDR 356
>gi|420486329|ref|ZP_14984943.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori Hp
P-4]
gi|420516839|ref|ZP_15015297.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori Hp
P-4c]
gi|420517962|ref|ZP_15016416.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori Hp
P-4d]
gi|393100254|gb|EJC00831.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori Hp
P-4]
gi|393121562|gb|EJC22044.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori Hp
P-4c]
gi|393123461|gb|EJC23930.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori Hp
P-4d]
Length = 375
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEEIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|386080711|ref|YP_005994236.1| carbamoyl-phosphate synthase small subunit [Pantoea ananatis PA13]
gi|354989892|gb|AER34016.1| carbamoyl-phosphate synthase small chain CarA [Pantoea ananatis
PA13]
Length = 382
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K GHHGGNHPV ++ N RV I+AQNH +AVD A LP + VTHI+L D T G+
Sbjct: 287 KLGHHGGNHPVKDLDNNRVMITAQNHGFAVDEANLPANLRVTHISLFDKTVQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL+ + + +A
Sbjct: 347 AFSFQGHPEASPGPGDAAPLFDHFIELIDAFRSKA 381
>gi|342214617|ref|ZP_08707301.1| carbamoyl-phosphate synthase, small subunit [Veillonella sp. oral
taxon 780 str. F0422]
gi|341591658|gb|EGS34789.1| carbamoyl-phosphate synthase, small subunit [Veillonella sp. oral
taxon 780 str. F0422]
Length = 355
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
+FGH G NHPV ++ RV I++QNH YAVD A+L G+ V+H ++NDGT GL + L
Sbjct: 264 RFGHRGSNHPVKDLDTNRVHITSQNHGYAVDEASLEGSGLRVSHRSVNDGTVEGLVHSEL 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
+MS+QYH EASPGP D+ +F F LM+
Sbjct: 324 PIMSVQYHPEASPGPTDNVYLFERFKTLMR 353
>gi|172035818|ref|YP_001802319.1| carbamoyl phosphate synthase small subunit [Cyanothece sp. ATCC
51142]
gi|354555054|ref|ZP_08974357.1| carbamoyl-phosphate synthase, small subunit [Cyanothece sp. ATCC
51472]
gi|171697272|gb|ACB50253.1| carbamoyl phosphate synthase small subunit [Cyanothece sp. ATCC
51142]
gi|353553208|gb|EHC22601.1| carbamoyl-phosphate synthase, small subunit [Cyanothece sp. ATCC
51472]
Length = 381
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P Q +VEI++QNH +AV +L VE+TH+NLND T AGL++ L
Sbjct: 290 KFGHRGLNQPCGLQQ--KVEITSQNHGFAVTEKSLDAEVEITHLNLNDRTVAGLSHKTLP 347
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+D +F FV +MK K
Sbjct: 348 FFSVQYHPEASPGPHDADYLFEKFVNMMKENK 379
>gi|113969309|ref|YP_733102.1| carbamoyl phosphate synthase small subunit [Shewanella sp. MR-4]
gi|113883993|gb|ABI38045.1| carbamoyl-phosphate synthase small subunit [Shewanella sp. MR-4]
Length = 386
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV NI+ G V I++QNH +A D ATLP ++VTH +L DG+ G+
Sbjct: 291 KFGHHGANHPVSNIEKGNVMITSQNHGFAADEATLPANIKVTHKSLFDGSLQGIHLTDKP 350
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP+D+ +F F+EL++ + A
Sbjct: 351 AFSFQGHPEASPGPNDAAPLFDHFIELIEQYRQNA 385
>gi|420422501|ref|ZP_14921578.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori
NQ4110]
gi|393036435|gb|EJB37474.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori
NQ4110]
Length = 375
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLKTNAVEITAQNHNYCV-PEEIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|291616227|ref|YP_003518969.1| CarA [Pantoea ananatis LMG 20103]
gi|291151257|gb|ADD75841.1| CarA [Pantoea ananatis LMG 20103]
Length = 391
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K GHHGGNHPV ++ N RV I+AQNH +AVD A LP + VTHI+L D T G+
Sbjct: 296 KLGHHGGNHPVKDLDNNRVMITAQNHGFAVDEANLPANLRVTHISLFDKTVQGIHRTDKP 355
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL+ + + +A
Sbjct: 356 AFSFQGHPEASPGPGDAAPLFDHFIELIDAFRSKA 390
>gi|229552255|ref|ZP_04440980.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Lactobacillus
rhamnosus LMS2-1]
gi|258508452|ref|YP_003171203.1| carbamoyl phosphate synthase small subunit [Lactobacillus rhamnosus
GG]
gi|385828120|ref|YP_005865892.1| carbamoylphosphate synthase small subunit [Lactobacillus rhamnosus
GG]
gi|385835314|ref|YP_005873088.1| carbamoyl-phosphate synthase small subunit [Lactobacillus rhamnosus
ATCC 8530]
gi|418070670|ref|ZP_12707945.1| carbamoyl phosphate synthase small subunit [Lactobacillus rhamnosus
R0011]
gi|421770407|ref|ZP_16207104.1| Carbamoyl-phosphate synthase small chain [Lactobacillus rhamnosus
LRHMDP2]
gi|421773625|ref|ZP_16210266.1| Carbamoyl-phosphate synthase small chain [Lactobacillus rhamnosus
LRHMDP3]
gi|423078001|ref|ZP_17066688.1| carbamoyl-phosphate synthase, small subunit [Lactobacillus
rhamnosus ATCC 21052]
gi|229314391|gb|EEN80364.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Lactobacillus
rhamnosus LMS2-1]
gi|257148379|emb|CAR87352.1| Carbamoyl-phosphate synthase, small subunit [Lactobacillus
rhamnosus GG]
gi|259649765|dbj|BAI41927.1| carbamoylphosphate synthase small subunit [Lactobacillus rhamnosus
GG]
gi|355394805|gb|AER64235.1| carbamoyl-phosphate synthase, small subunit [Lactobacillus
rhamnosus ATCC 8530]
gi|357540090|gb|EHJ24107.1| carbamoyl phosphate synthase small subunit [Lactobacillus rhamnosus
R0011]
gi|357552381|gb|EHJ34154.1| carbamoyl-phosphate synthase, small subunit [Lactobacillus
rhamnosus ATCC 21052]
gi|411181625|gb|EKS48792.1| Carbamoyl-phosphate synthase small chain [Lactobacillus rhamnosus
LRHMDP3]
gi|411182279|gb|EKS49431.1| Carbamoyl-phosphate synthase small chain [Lactobacillus rhamnosus
LRHMDP2]
Length = 360
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/95 (44%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
K+GH G NHPV I GR++ ++QNH YAVDP ++ P + VTH+ +NDGT GL +
Sbjct: 262 KYGHRGFNHPVREIATGRIDFTSQNHGYAVDPDSIDPDTLLVTHVEINDGTVEGLRHRLY 321
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
++Q+H +A+PGP D+D +F +F+E+M + R
Sbjct: 322 PAFTVQFHPDAAPGPHDADHLFDEFMEMMDAFSDR 356
>gi|199598367|ref|ZP_03211786.1| carbamoyl phosphate synthase small subunit [Lactobacillus rhamnosus
HN001]
gi|199590686|gb|EDY98773.1| carbamoyl phosphate synthase small subunit [Lactobacillus rhamnosus
HN001]
Length = 360
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/95 (44%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
K+GH G NHPV I GR++ ++QNH YAVDP ++ P + VTH+ +NDGT GL +
Sbjct: 262 KYGHRGFNHPVREIATGRIDFTSQNHGYAVDPDSIDPDTLLVTHVEINDGTVEGLRHRLY 321
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
++Q+H +A+PGP D+D +F +F+E+M + R
Sbjct: 322 PAFTVQFHPDAAPGPHDADHLFDEFMEMMDAFSDR 356
>gi|21242605|ref|NP_642187.1| carbamoyl phosphate synthase small subunit [Xanthomonas axonopodis
pv. citri str. 306]
gi|21759018|sp|P58895.1|CARA_XANAC RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|21108067|gb|AAM36723.1| carbamoyl-phosphate synthase small chain [Xanthomonas axonopodis
pv. citri str. 306]
Length = 391
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 57/88 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ GRV I++QNH +AVD +TLP V VTH +L DGT G+A
Sbjct: 302 GHHGANHPVQDLDGGRVMITSQNHGFAVDESTLPANVRVTHRSLFDGTNQGIALTDAPAF 361
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D +F FV+LM +
Sbjct: 362 SFQGHPEASPGPRDVGPLFDRFVDLMAA 389
>gi|336449993|ref|ZP_08620450.1| carbamoyl-phosphate synthase, small subunit [Idiomarina sp. A28L]
gi|336283150|gb|EGN76357.1| carbamoyl-phosphate synthase, small subunit [Idiomarina sp. A28L]
Length = 393
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/88 (50%), Positives = 60/88 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K GHHG NHPV ++ GRV I++QNH +AVD A+LP+ ++ TH +L DGT G+ + L
Sbjct: 294 KHGHHGANHPVQDLATGRVMITSQNHGFAVDEASLPEHLKATHKSLFDGTLQGIQHTQLP 353
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
S Q H EASPGP D+ +F F+EL+
Sbjct: 354 AFSFQGHPEASPGPHDAAELFDYFIELL 381
>gi|260881122|ref|ZP_05403681.2| carbamoyl-phosphate synthase, small subunit [Mitsuokella multacida
DSM 20544]
gi|260849585|gb|EEX69592.1| carbamoyl-phosphate synthase, small subunit [Mitsuokella multacida
DSM 20544]
Length = 357
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH G N PV +++ G V IS+QNH YAVD A+L + VTHIN+NDGT G+ + L
Sbjct: 265 KFGHRGTNQPVKDLRTGNVYISSQNHGYAVDEASLKDLPLTVTHINVNDGTVEGMRHETL 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
+ S+QYH EA+PGPDD+ +F +F ++K
Sbjct: 325 PIFSVQYHPEAAPGPDDNMYLFDEFWAMLKK 355
>gi|420453998|ref|ZP_14952832.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
A-8]
gi|393068471|gb|EJB69273.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
A-8]
Length = 375
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEEIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|325922456|ref|ZP_08184223.1| carbamoyl-phosphate synthase small subunit [Xanthomonas gardneri
ATCC 19865]
gi|325547076|gb|EGD18163.1| carbamoyl-phosphate synthase small subunit [Xanthomonas gardneri
ATCC 19865]
Length = 377
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 48/93 (51%), Positives = 57/93 (61%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ GRV I++QNH +AVD +TLP V VTH +L DGT G+A
Sbjct: 285 GHHGANHPVQDLDGGRVMITSQNHGFAVDESTLPANVRVTHRSLFDGTNQGIALTDAPAF 344
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D +F FV LM RA
Sbjct: 345 SFQGHPEASPGPRDVGPLFDRFVALMVKDAERA 377
>gi|194365588|ref|YP_002028198.1| carbamoyl phosphate synthase small subunit [Stenotrophomonas
maltophilia R551-3]
gi|194348392|gb|ACF51515.1| carbamoyl-phosphate synthase, small subunit [Stenotrophomonas
maltophilia R551-3]
Length = 393
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 59/90 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ +GRV I++QNH +A+D ATLP + VTH +L DGT G+A +
Sbjct: 303 GHHGANHPVQDLDSGRVMITSQNHGFAIDEATLPPTLRVTHRSLFDGTNQGVARTDVPAF 362
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D +F FV LM+ K
Sbjct: 363 SFQGHPEASPGPHDVGPLFDRFVVLMEEAK 392
>gi|440751669|ref|ZP_20930872.1| carbamoyl-phosphate synthase, small subunit [Microcystis aeruginosa
TAIHU98]
gi|440176162|gb|ELP55435.1| carbamoyl-phosphate synthase, small subunit [Microcystis aeruginosa
TAIHU98]
Length = 382
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P Q +VEI++QNH +AV A+L VE+TH+NLND T AGL + +L
Sbjct: 289 KFGHRGLNQPCGLQQ--QVEITSQNHGFAVQEASLNPQVEITHLNLNDRTVAGLKHKSLP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+D +F FV+LM+ K
Sbjct: 347 FFSVQYHPEASPGPHDADYLFGKFVDLMRQAK 378
>gi|378768596|ref|YP_005197069.1| carbamoyl-phosphate synthase small subunit [Pantoea ananatis LMG
5342]
gi|365188082|emb|CCF11032.1| carbamoyl-phosphate synthase small chain CarA [Pantoea ananatis LMG
5342]
Length = 382
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K GHHGGNHPV ++ N RV I+AQNH +AVD A LP + VTHI+L D T G+
Sbjct: 287 KLGHHGGNHPVKDLDNNRVMITAQNHGFAVDEANLPANLRVTHISLFDKTVQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL+ + + +A
Sbjct: 347 AFSFQGHPEASPGPGDAAPLFDHFIELIDAFRSKA 381
>gi|425436462|ref|ZP_18816898.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9432]
gi|389678832|emb|CCH92354.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9432]
Length = 382
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P Q +VEI++QNH +AV A+L VE+TH+NLND T AGL + +L
Sbjct: 289 KFGHRGLNQPCGLQQ--QVEITSQNHGFAVQEASLNPQVEITHLNLNDRTVAGLKHKSLP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+D +F FV+LM+ K
Sbjct: 347 FFSVQYHPEASPGPHDADYLFGKFVDLMRQAK 378
>gi|349699313|ref|ZP_08900942.1| carbamoyl phosphate synthase small subunit [Gluconacetobacter
europaeus LMG 18494]
Length = 465
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/93 (47%), Positives = 59/93 (63%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G N PV ++ G+VEI++QNH +AVD +LP V TH +L DG+ G+A
Sbjct: 373 GHRGANQPVKDLATGKVEITSQNHGFAVDDKSLPNDVRATHTSLFDGSNEGIATSRYPAF 432
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EASPGP DS +FR FV+L+ + A
Sbjct: 433 SVQYHPEASPGPSDSHYLFRRFVDLIDTTTKTA 465
>gi|114046509|ref|YP_737059.1| carbamoyl phosphate synthase small subunit [Shewanella sp. MR-7]
gi|113887951|gb|ABI42002.1| carbamoyl-phosphate synthase small subunit [Shewanella sp. MR-7]
Length = 386
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV NI+ G V I++QNH +A D ATLP ++VTH +L DG+ G+
Sbjct: 291 KFGHHGANHPVSNIEKGNVMITSQNHGFAADEATLPANIKVTHKSLFDGSLQGIHLTDKP 350
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP+D+ +F F+EL++ + A
Sbjct: 351 AFSFQGHPEASPGPNDAAPLFDHFIELIEQYRQNA 385
>gi|423111531|ref|ZP_17099225.1| carbamoyl-phosphate synthase small chain [Klebsiella oxytoca
10-5243]
gi|423112451|ref|ZP_17100142.1| carbamoyl-phosphate synthase small chain [Klebsiella oxytoca
10-5245]
gi|376376730|gb|EHS89507.1| carbamoyl-phosphate synthase small chain [Klebsiella oxytoca
10-5243]
gi|376390828|gb|EHT03510.1| carbamoyl-phosphate synthase small chain [Klebsiella oxytoca
10-5245]
Length = 382
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD A++P + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDIDNNVVMITAQNHGFAVDEASMPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL+K + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIKQYRQSA 381
>gi|331007283|ref|ZP_08330485.1| Carbamoyl-phosphate synthase small chain [gamma proteobacterium
IMCC1989]
gi|330418905|gb|EGG93369.1| Carbamoyl-phosphate synthase small chain [gamma proteobacterium
IMCC1989]
Length = 398
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 58/88 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N++ G V I++QNH +A D + LP V+VTH +L DGT G+
Sbjct: 305 KFGHHGGNHPVQNVETGVVMITSQNHGFAADESNLPANVKVTHKSLFDGTLQGIELTDKP 364
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
S Q H EASPGP D+ +F F+ELM
Sbjct: 365 AFSFQGHPEASPGPHDAAPLFDHFIELM 392
>gi|386014620|ref|YP_005932896.1| carbamoyl-phosphate synthase small subunit [Pantoea ananatis
AJ13355]
gi|327392678|dbj|BAK10100.1| carbamoyl-phosphate synthase small chain CarA [Pantoea ananatis
AJ13355]
Length = 347
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K GHHGGNHPV ++ N RV I+AQNH +AVD A LP + VTHI+L D T G+
Sbjct: 252 KLGHHGGNHPVKDLDNNRVMITAQNHGFAVDEANLPANLRVTHISLFDKTVQGIHRTDKP 311
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL+ + + +A
Sbjct: 312 AFSFQGHPEASPGPGDAAPLFDHFIELIDAFRSKA 346
>gi|42522428|ref|NP_967808.1| carbamoyl phosphate synthase small subunit [Bdellovibrio
bacteriovorus HD100]
gi|39574960|emb|CAE78801.1| carbamoyl-phosphate synthase small chain [Bdellovibrio
bacteriovorus HD100]
Length = 354
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 41/88 (46%), Positives = 58/88 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHP+ + ++ +++QNH YAV+ A+LP V+VTH+NLNDGT AG
Sbjct: 266 KFGHRGSNHPIRDTLLNQIYMTSQNHGYAVEEASLPSDVKVTHVNLNDGTVAGFYSEKRK 325
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
+ +QYH E+ PGP ++ +F FVE M
Sbjct: 326 CLGIQYHPESCPGPHEASGLFSYFVERM 353
>gi|312869958|ref|ZP_07730097.1| carbamoyl-phosphate synthase, small subunit [Lactobacillus oris
PB013-T2-3]
gi|417884903|ref|ZP_12529064.1| carbamoyl-phosphate synthase, small subunit [Lactobacillus oris
F0423]
gi|311094543|gb|EFQ52848.1| carbamoyl-phosphate synthase, small subunit [Lactobacillus oris
PB013-T2-3]
gi|341596859|gb|EGS39445.1| carbamoyl-phosphate synthase, small subunit [Lactobacillus oris
F0423]
Length = 363
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV NI G ++ ++QNH YAVDPA++ K + VTH+ +NDGT GL +
Sbjct: 265 KFGHRGFNHPVRNIATGEIDFTSQNHGYAVDPASVDAKKLLVTHMEVNDGTVEGLRHKQY 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
S+Q+H +A+PGP D+D +F DF+ ++
Sbjct: 325 PAFSVQFHPDAAPGPHDADSLFDDFISMV 353
>gi|153812947|ref|ZP_01965615.1| hypothetical protein RUMOBE_03354 [Ruminococcus obeum ATCC 29174]
gi|149831025|gb|EDM86115.1| carbamoyl-phosphate synthase, small subunit [Ruminococcus obeum
ATCC 29174]
Length = 362
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/90 (48%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG--VEVTHINLNDGTCAGLAYPA 58
K+GH GGNHPV ++ GRV IS+QNH Y VD L K + +N+NDGT G+AY
Sbjct: 265 KYGHRGGNHPVKDLATGRVYISSQNHGYVVDAEALEKKGIAKPAFVNVNDGTNEGMAYEG 324
Query: 59 LNVMSLQYHLEASPGPDDSDCVFRDFVELM 88
N+ ++Q+H EA PGP DS +F F+E+M
Sbjct: 325 KNIFTVQFHPEACPGPQDSSYLFDRFMEMM 354
>gi|418518195|ref|ZP_13084346.1| carbamoyl phosphate synthase small subunit [Xanthomonas axonopodis
pv. malvacearum str. GSPB1386]
gi|418522617|ref|ZP_13088650.1| carbamoyl phosphate synthase small subunit [Xanthomonas axonopodis
pv. malvacearum str. GSPB2388]
gi|410700918|gb|EKQ59454.1| carbamoyl phosphate synthase small subunit [Xanthomonas axonopodis
pv. malvacearum str. GSPB2388]
gi|410704790|gb|EKQ63271.1| carbamoyl phosphate synthase small subunit [Xanthomonas axonopodis
pv. malvacearum str. GSPB1386]
Length = 391
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 57/88 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ GRV I++QNH +AVD +TLP V VTH +L DGT G+A
Sbjct: 302 GHHGANHPVQDLDGGRVMITSQNHGFAVDESTLPANVRVTHRSLFDGTNQGIALTDAPAF 361
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D +F FV+LM +
Sbjct: 362 SFQGHPEASPGPRDVGPLFDRFVDLMAA 389
>gi|420464272|ref|ZP_14963046.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
H-4]
gi|393078346|gb|EJB79088.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
H-4]
Length = 375
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEEIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|381171590|ref|ZP_09880733.1| carbamoyl-phosphate synthase, small subunit [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380687963|emb|CCG37220.1| carbamoyl-phosphate synthase, small subunit [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 362
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 57/88 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ GRV I++QNH +AVD +TLP V VTH +L DGT G+A
Sbjct: 273 GHHGANHPVQDLDGGRVMITSQNHGFAVDESTLPANVRVTHRSLFDGTNQGIALTDAPAF 332
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D +F FV+LM +
Sbjct: 333 SFQGHPEASPGPRDVGPLFDRFVDLMAA 360
>gi|337279396|ref|YP_004618868.1| carbamoyl-phosphate synthase small chain [Ramlibacter tataouinensis
TTB310]
gi|334730473|gb|AEG92849.1| candidate carbamoyl-phosphate synthase small chain
(Carbamoyl-phosphate synthase (glutamine-hydrolyzing))
[Ramlibacter tataouinensis TTB310]
Length = 387
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 57/92 (61%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV +++NGRV I++QNH +AVD TLP + TH++L DGT GLA
Sbjct: 295 KFGHHGANHPVKDLENGRVSITSQNHGFAVDEKTLPANLRPTHVSLFDGTLQGLARTDKP 354
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
Q H EASPGP D +F F LM K
Sbjct: 355 AFCFQGHPEASPGPHDIGYLFDKFTGLMDEKK 386
>gi|329118074|ref|ZP_08246786.1| carbamoyl-phosphate synthase, small subunit [Neisseria
bacilliformis ATCC BAA-1200]
gi|327465734|gb|EGF12007.1| carbamoyl-phosphate synthase, small subunit [Neisseria
bacilliformis ATCC BAA-1200]
Length = 377
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 58/87 (66%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGHHG NHPV ++Q GRV I++QNH + VD +LP+GV++TH +L DG+ G+ +
Sbjct: 285 FGHHGANHPVQDLQTGRVMITSQNHGFEVDADSLPEGVKITHRSLFDGSLQGIELADRPI 344
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELM 88
S Q H EASPGP D C+F FV M
Sbjct: 345 FSFQGHPEASPGPHDVACLFDKFVANM 371
>gi|188575982|ref|YP_001912911.1| carbamoyl phosphate synthase small subunit [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188520434|gb|ACD58379.1| carbamoyl-phosphate synthase, small subunit [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 390
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 57/88 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ GRV I++QNH +AVD +TLP V VTH +L DGT G+A
Sbjct: 301 GHHGANHPVQDLDGGRVMITSQNHGFAVDESTLPANVRVTHRSLFDGTNQGIALTDAPAF 360
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D +F FV+LM +
Sbjct: 361 SFQGHPEASPGPRDVGPLFDRFVDLMAA 388
>gi|384419196|ref|YP_005628556.1| carbamoyl-phosphate synthase small subunit [Xanthomonas oryzae pv.
oryzicola BLS256]
gi|353462108|gb|AEQ96387.1| carbamoyl-phosphate synthase, small subunit [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 374
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 57/88 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ GRV I++QNH +AVD +TLP V VTH +L DGT G+A
Sbjct: 285 GHHGANHPVQDLDGGRVMITSQNHGFAVDESTLPANVRVTHRSLFDGTNQGIALTDAPAF 344
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D +F FV+LM +
Sbjct: 345 SFQGHPEASPGPRDVGPLFDRFVDLMAA 372
>gi|427824471|ref|ZP_18991533.1| carbamoyl-phosphate synthase small chain [Bordetella bronchiseptica
Bbr77]
gi|410589736|emb|CCN04809.1| carbamoyl-phosphate synthase small chain [Bordetella bronchiseptica
Bbr77]
Length = 347
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 56/92 (60%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K GHHG NHPV ++Q+GRV I++QNH +AVD ATLP VTHI+L DGT G
Sbjct: 256 KTGHHGANHPVQDVQSGRVFITSQNHGFAVDAATLPANTRVTHISLFDGTLQGFELTDRP 315
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
Q H EASPGP D +F F+ LM K
Sbjct: 316 AFCFQGHPEASPGPHDIIVLFDKFISLMAGQK 347
>gi|384891602|ref|YP_005765735.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori 908]
gi|385224276|ref|YP_005784202.1| Carbamoyl-phosphate synthase small subunit [Helicobacter pylori
2017]
gi|385232132|ref|YP_005792051.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori 2018]
gi|307637911|gb|ADN80361.1| Carbamoyl-phosphate synthase small chain [Helicobacter pylori 908]
gi|325996509|gb|ADZ51914.1| Carbamoyl-phosphate synthase small chain [Helicobacter pylori 2018]
gi|325998098|gb|ADZ50306.1| Carbamoyl-phosphate synthase small subunit [Helicobacter pylori
2017]
Length = 375
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLKTNAVEITAQNHNYCV-PEEIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
++S+Q+H E+SPGP +S +F++FVEL++S
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLES 374
>gi|212639630|ref|YP_002316150.1| carbamoyl phosphate synthase small subunit [Anoxybacillus
flavithermus WK1]
gi|212561110|gb|ACJ34165.1| Carbamoylphosphate synthase small subunit [Anoxybacillus
flavithermus WK1]
Length = 383
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV ++Q G+V I++QNH Y V +L +EVTHI LNDGT GL + +
Sbjct: 283 KFGHRGSNHPVKHLQTGKVAITSQNHGYTVTEQSLRHTRLEVTHIALNDGTIEGLRHRDV 342
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
++QYH EASPGP+D++ +F DF+ +++ K
Sbjct: 343 PAFTVQYHPEASPGPEDANGLFDDFIAMIEQFK 375
>gi|33595901|ref|NP_883544.1| carbamoyl phosphate synthase small subunit [Bordetella
parapertussis 12822]
gi|33600432|ref|NP_887992.1| carbamoyl phosphate synthase small subunit [Bordetella
bronchiseptica RB50]
gi|410419197|ref|YP_006899646.1| carbamoyl-phosphate synthase small subunit [Bordetella
bronchiseptica MO149]
gi|410473942|ref|YP_006897223.1| carbamoyl-phosphate synthase small subunit [Bordetella
parapertussis Bpp5]
gi|412339321|ref|YP_006968076.1| carbamoyl-phosphate synthase small subunit [Bordetella
bronchiseptica 253]
gi|427813666|ref|ZP_18980730.1| carbamoyl-phosphate synthase small chain [Bordetella bronchiseptica
1289]
gi|427820555|ref|ZP_18987618.1| carbamoyl-phosphate synthase small chain [Bordetella bronchiseptica
D445]
gi|33565980|emb|CAE36531.1| carbamoyl-phosphate synthase small chain [Bordetella parapertussis]
gi|33568031|emb|CAE31944.1| carbamoyl-phosphate synthase small chain [Bordetella bronchiseptica
RB50]
gi|408444052|emb|CCJ50755.1| carbamoyl-phosphate synthase small chain [Bordetella parapertussis
Bpp5]
gi|408446492|emb|CCJ58161.1| carbamoyl-phosphate synthase small chain [Bordetella bronchiseptica
MO149]
gi|408769155|emb|CCJ53930.1| carbamoyl-phosphate synthase small chain [Bordetella bronchiseptica
253]
gi|410564666|emb|CCN22213.1| carbamoyl-phosphate synthase small chain [Bordetella bronchiseptica
1289]
gi|410571555|emb|CCN19784.1| carbamoyl-phosphate synthase small chain [Bordetella bronchiseptica
D445]
Length = 347
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 56/92 (60%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K GHHG NHPV ++Q+GRV I++QNH +AVD ATLP VTHI+L DGT G
Sbjct: 256 KTGHHGANHPVQDVQSGRVFITSQNHGFAVDAATLPANTRVTHISLFDGTLQGFELTDRP 315
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
Q H EASPGP D +F F+ LM K
Sbjct: 316 AFCFQGHPEASPGPHDIIVLFDKFISLMAGQK 347
>gi|421712257|ref|ZP_16151594.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori
R030b]
gi|407210152|gb|EKE80032.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori
R030b]
Length = 375
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLKTNAVEITAQNHNYCV-PEEIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|326204299|ref|ZP_08194158.1| carbamoyl-phosphate synthase, small subunit [Clostridium
papyrosolvens DSM 2782]
gi|325985574|gb|EGD46411.1| carbamoyl-phosphate synthase, small subunit [Clostridium
papyrosolvens DSM 2782]
Length = 351
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV + GR I++QNHNYA+D ++ + + +TH N+ND T G + L
Sbjct: 265 KFGHHGGNHPVKDYITGRCYITSQNHNYAIDSSS-NEDIVITHRNVNDDTIEGFRHKTLP 323
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
++S+QYH EA+PGP DS +F DFV+++
Sbjct: 324 LISVQYHPEAAPGPQDSAYIFDDFVKML 351
>gi|424935140|ref|ZP_18353512.1| Carbamoylphosphate synthetase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
gi|407809327|gb|EKF80578.1| Carbamoylphosphate synthetase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
Length = 376
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 281 KFGHHGGNHPVKDIDNNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 340
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 341 AFSFQGHPEASPGPHDAAPLFDHFIELIELYRQSA 375
>gi|319760266|ref|YP_004124204.1| carbamoyl-phosphate synthase small subunit [Candidatus Blochmannia
vafer str. BVAF]
gi|318038980|gb|ADV33530.1| carbamoyl-phosphate synthase small chain [Candidatus Blochmannia
vafer str. BVAF]
Length = 388
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 59/90 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV +++ +V I+ QNHN+ VD TLP +VTHI+L DGT G+
Sbjct: 290 KFGHHGSNHPVKDLEINKVLITTQNHNFVVDMMTLPNIFQVTHISLFDGTLQGIKCLNKP 349
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
V Q H EASPGP DS +F F+EL+K+
Sbjct: 350 VFGFQGHPEASPGPHDSVFIFNYFIELIKN 379
>gi|163868744|ref|YP_001609958.1| carbamoyl phosphate synthase small subunit [Bartonella tribocorum
CIP 105476]
gi|254813547|sp|A9IWF8.1|CARA_BART1 RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|161018405|emb|CAK01963.1| carbamoyl-phosphate synthase small chain [Bartonella tribocorum CIP
105476]
Length = 398
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 61/86 (70%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ +G+VEI + NH +AVD ATLPK V+ THI+L DG+ G+ V
Sbjct: 306 GHHGANHPVKDLNSGKVEIVSMNHGFAVDAATLPKHVQETHISLFDGSNCGIRIIGKPVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EASPGP DS +F+ F +L+
Sbjct: 366 SVQYHPEASPGPQDSHYLFQHFCDLI 391
>gi|224476305|ref|YP_002633911.1| carbamoyl phosphate synthase small subunit [Staphylococcus carnosus
subsp. carnosus TM300]
gi|222420912|emb|CAL27726.1| carbamoyl-phosphate synthase, small chain [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 366
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV ++ G+V +++QNH YA+D ++ +EVTHI LND T GL + L
Sbjct: 266 KFGHRGANHPVKDLATGKVALTSQNHGYAIDAESITNTDLEVTHIALNDQTVEGLKHQTL 325
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S+QYH EA PGP DS+ +F FV +M K +
Sbjct: 326 PAFSVQYHPEACPGPTDSNYLFDQFVSMMNEFKEK 360
>gi|294624588|ref|ZP_06703263.1| carbamoyl-phosphate synthase small subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|294666703|ref|ZP_06731939.1| carbamoyl-phosphate synthase small subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292601123|gb|EFF45185.1| carbamoyl-phosphate synthase small subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292603528|gb|EFF46943.1| carbamoyl-phosphate synthase small subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 444
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 57/88 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ GRV I++QNH +AVD +TLP V VTH +L DGT G+A
Sbjct: 355 GHHGANHPVQDLDGGRVMITSQNHGFAVDESTLPANVRVTHRSLFDGTNQGIALTDAPAF 414
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D +F FV+LM +
Sbjct: 415 SFQGHPEASPGPRDVGPLFDRFVDLMAA 442
>gi|268317552|ref|YP_003291271.1| carbamoyl-phosphate synthase small subunit [Rhodothermus marinus
DSM 4252]
gi|262335086|gb|ACY48883.1| carbamoyl-phosphate synthase, small subunit [Rhodothermus marinus
DSM 4252]
Length = 379
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPALNV 61
GH G NHPV N++ GRVE++ QNH +AV+ ++ P+ EV+HINLND T GL + +
Sbjct: 279 GHRGANHPVKNLRTGRVEVTTQNHGFAVEAESVDPREAEVSHINLNDRTVEGLRFKSFAG 338
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKS 90
+S+QYH EASPGP DS +F +F+ L+ +
Sbjct: 339 LSVQYHPEASPGPHDSRYLFDEFLALVAA 367
>gi|117919416|ref|YP_868608.1| carbamoyl phosphate synthase small subunit [Shewanella sp. ANA-3]
gi|117611748|gb|ABK47202.1| carbamoyl-phosphate synthase small subunit [Shewanella sp. ANA-3]
Length = 386
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV NI+ G V I++QNH +A D ATLP ++VTH +L DG+ G+
Sbjct: 291 KFGHHGANHPVSNIEKGNVMITSQNHGFAADEATLPANIKVTHKSLFDGSLQGIHLTDKP 350
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP+D+ +F F+EL++ + A
Sbjct: 351 AFSFQGHPEASPGPNDAAPLFDHFIELIEQYRQNA 385
>gi|317129274|ref|YP_004095556.1| carbamoyl-phosphate synthase, small subunit [Bacillus
cellulosilyticus DSM 2522]
gi|315474222|gb|ADU30825.1| carbamoyl-phosphate synthase, small subunit [Bacillus
cellulosilyticus DSM 2522]
Length = 362
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV +++ G++ I+AQNH Y V P +L +EVTH+N+NDG+ G+ +
Sbjct: 264 KFGHRGSNHPVKDLRTGQIAITAQNHGYTVHPDSLSGTKLEVTHVNVNDGSIEGIRHTEE 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP+D+ +F++F E++ S +
Sbjct: 324 LAFSVQYHPEASPGPEDAQDLFKEFREMLDSSR 356
>gi|33592550|ref|NP_880194.1| carbamoyl phosphate synthase small subunit [Bordetella pertussis
Tohama I]
gi|384203854|ref|YP_005589593.1| carbamoyl phosphate synthase small subunit [Bordetella pertussis
CS]
gi|408415087|ref|YP_006625794.1| carbamoyl-phosphate synthase small subunit [Bordetella pertussis
18323]
gi|33572196|emb|CAE41742.1| carbamoyl-phosphate synthase small chain [Bordetella pertussis
Tohama I]
gi|332381968|gb|AEE66815.1| carbamoyl phosphate synthase small subunit [Bordetella pertussis
CS]
gi|401777257|emb|CCJ62534.1| carbamoyl-phosphate synthase small chain [Bordetella pertussis
18323]
Length = 365
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 56/92 (60%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K GHHG NHPV ++Q+GRV I++QNH +AVD ATLP VTHI+L DGT G
Sbjct: 274 KTGHHGANHPVQDVQSGRVFITSQNHGFAVDAATLPANTRVTHISLFDGTLQGFELTDRP 333
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
Q H EASPGP D +F F+ LM K
Sbjct: 334 AFCFQGHPEASPGPHDIIVLFDKFISLMAGQK 365
>gi|383783996|ref|YP_005468564.1| carbamoylphosphate synthase, small subunit [Leptospirillum
ferrooxidans C2-3]
gi|383082907|dbj|BAM06434.1| putative carbamoylphosphate synthase, small subunit [Leptospirillum
ferrooxidans C2-3]
Length = 361
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 63/88 (71%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGHHG NHPV ++Q G+V I++QNHNYAV +LP G E + +L DG+ G+ + +
Sbjct: 273 FGHHGVNHPVLDLQTGKVWITSQNHNYAVLEDSLPDGCEPLYRSLYDGSLEGIRFSRSPI 332
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMK 89
+S+Q+H EA+PGP D+ +F +F+E+MK
Sbjct: 333 LSVQFHPEAAPGPTDAFPIFSEFLEMMK 360
>gi|300023330|ref|YP_003755941.1| carbamoyl-phosphate synthase, small subunit [Hyphomicrobium
denitrificans ATCC 51888]
gi|299525151|gb|ADJ23620.1| carbamoyl-phosphate synthase, small subunit [Hyphomicrobium
denitrificans ATCC 51888]
Length = 399
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 61/93 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + +VEI + NH +AVD +LPKGV TH++L DG+ GLA V
Sbjct: 302 GHHGANHPVKDFTTNKVEIVSMNHGFAVDRDSLPKGVVETHVSLFDGSNCGLALEGKPVF 361
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +F FV LM+ K +A
Sbjct: 362 SVQHHPEASPGPQDSHYLFTRFVNLMREQKGQA 394
>gi|206579451|ref|YP_002240499.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
342]
gi|206568509|gb|ACI10285.1| carbamoyl-phosphate synthase, small subunit [Klebsiella pneumoniae
342]
Length = 382
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDIDNNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIELYRQSA 381
>gi|392382893|ref|YP_005032090.1| carbamoyl phosphate synthetase, small subunit [Azospirillum
brasilense Sp245]
gi|356877858|emb|CCC98714.1| carbamoyl phosphate synthetase, small subunit [Azospirillum
brasilense Sp245]
Length = 391
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/87 (52%), Positives = 57/87 (65%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
GH G NHPV ++ +GRVEI++QNH + V TLP EVTH++L DGT G+ V
Sbjct: 299 LGHRGANHPVKDLASGRVEITSQNHGFVVMEETLPADAEVTHVSLFDGTNEGIRLKNKPV 358
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELM 88
S+QYH EASPGP DS +F FV LM
Sbjct: 359 FSVQYHPEASPGPQDSHYLFDRFVALM 385
>gi|152968621|ref|YP_001333730.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238893016|ref|YP_002917750.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|330009313|ref|ZP_08306504.1| carbamoyl-phosphate synthase, small subunit [Klebsiella sp. MS
92-3]
gi|419761765|ref|ZP_14288016.1| carbamoyl-phosphate synthase, small subunit [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
gi|150953470|gb|ABR75500.1| carbamoyl-phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238545332|dbj|BAH61683.1| carbamoyl-phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|238774019|dbj|BAH66516.1| carbamoyl-phosphate synthase small subunit [Klebsiella pneumoniae
NTUH-K2044]
gi|238774051|dbj|BAH66547.1| carbamoyl-phosphate synthase small subunit [Klebsiella pneumoniae]
gi|328534839|gb|EGF61383.1| carbamoyl-phosphate synthase, small subunit [Klebsiella sp. MS
92-3]
gi|397745306|gb|EJK92513.1| carbamoyl-phosphate synthase, small subunit [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
Length = 391
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 296 KFGHHGGNHPVKDIDNNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 355
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 356 AFSFQGHPEASPGPHDAAPLFDHFIELIELYRQSA 390
>gi|149914082|ref|ZP_01902614.1| carbamoyl-phosphate synthase, small subunit [Roseobacter sp.
AzwK-3b]
gi|149812366|gb|EDM72197.1| carbamoyl-phosphate synthase, small subunit [Roseobacter sp.
AzwK-3b]
Length = 382
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/86 (51%), Positives = 59/86 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV +++ G+VEI++ NH +AVD TLPKG+ TH++L DG+ G+ V
Sbjct: 295 GHHGANHPVKDMETGKVEITSMNHGFAVDSQTLPKGIMETHVSLFDGSNCGIRMIDRPVF 354
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELM 88
S+Q+H EASPGP DS +F F E M
Sbjct: 355 SVQHHPEASPGPQDSFYLFERFAESM 380
>gi|378976911|ref|YP_005225052.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|419973521|ref|ZP_14488945.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH1]
gi|419980072|ref|ZP_14495359.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH2]
gi|419985056|ref|ZP_14500199.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH4]
gi|419990141|ref|ZP_14505114.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH5]
gi|419996021|ref|ZP_14510825.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH6]
gi|420003056|ref|ZP_14517704.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH7]
gi|420007895|ref|ZP_14522387.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH8]
gi|420013865|ref|ZP_14528174.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH9]
gi|420019176|ref|ZP_14533370.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH10]
gi|420024668|ref|ZP_14538680.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|420031661|ref|ZP_14545481.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|420037897|ref|ZP_14551548.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|420042219|ref|ZP_14555713.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|420048331|ref|ZP_14561645.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|420053627|ref|ZP_14566804.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|420059497|ref|ZP_14572504.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|420065150|ref|ZP_14577957.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|420071508|ref|ZP_14584153.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|420075951|ref|ZP_14588425.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|420083627|ref|ZP_14595905.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|421913324|ref|ZP_16343011.1| Carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|421917167|ref|ZP_16346730.1| Carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|428149960|ref|ZP_18997759.1| Carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|428942730|ref|ZP_19015702.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
VA360]
gi|364516322|gb|AEW59450.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|397346988|gb|EJJ40098.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH2]
gi|397348160|gb|EJJ41262.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH1]
gi|397353040|gb|EJJ46117.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH4]
gi|397366142|gb|EJJ58761.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH6]
gi|397367756|gb|EJJ60365.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH5]
gi|397370363|gb|EJJ62946.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH7]
gi|397379187|gb|EJJ71385.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH9]
gi|397383981|gb|EJJ76108.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH8]
gi|397389342|gb|EJJ81284.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH10]
gi|397398605|gb|EJJ90267.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|397399808|gb|EJJ91458.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|397404854|gb|EJJ96340.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|397415519|gb|EJK06704.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|397416868|gb|EJK08038.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|397423855|gb|EJK14772.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|397432237|gb|EJK22901.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|397435495|gb|EJK26110.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|397440148|gb|EJK30562.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|397447913|gb|EJK38098.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|397451050|gb|EJK41142.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|410112788|emb|CCM85636.1| Carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|410120510|emb|CCM89355.1| Carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|426298112|gb|EKV60544.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
VA360]
gi|427540096|emb|CCM93897.1| Carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
Length = 382
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDIDNNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIELYRQSA 381
>gi|308184983|ref|YP_003929116.1| carbamoyl phosphate synthase small subunit [Helicobacter pylori
SJM180]
gi|308060903|gb|ADO02799.1| carbamoyl phosphate synthase small subunit [Helicobacter pylori
SJM180]
Length = 375
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEAIEEIAVITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|161378171|ref|NP_298396.2| carbamoyl phosphate synthase small subunit [Xylella fastidiosa
9a5c]
gi|21759060|sp|Q9PEC2.2|CARA_XYLFA RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
Length = 374
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 60/90 (66%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
+ GHHG NHPV ++++GRV I++QNH +AVD ATLP V VTH +L DGT G+ +
Sbjct: 283 RHGHHGANHPVQDLRSGRVMITSQNHGFAVDEATLPSNVRVTHRSLFDGTNQGIELLDVP 342
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D D +F F+ +M +
Sbjct: 343 AFSFQGHPEASPGPHDVDVLFDRFITMMAA 372
>gi|418010900|ref|ZP_12650671.1| carbamoyl-phosphate synthase small chain [Lactobacillus casei
Lc-10]
gi|410553479|gb|EKQ27482.1| carbamoyl-phosphate synthase small chain [Lactobacillus casei
Lc-10]
Length = 360
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/95 (43%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
K+GH G NHPV I GR++ ++QNH YAVDP ++ P + +TH+ +NDGT GL +
Sbjct: 262 KYGHRGFNHPVREIATGRIDFTSQNHGYAVDPDSIDPDTLLITHVEINDGTVEGLRHRLY 321
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
++Q+H +A+PGP D+D +F +F+E+M + R
Sbjct: 322 PAFTVQFHPDAAPGPHDADHLFDEFMEMMDAFSNR 356
>gi|337742037|ref|YP_004633765.1| carbamoyl-phosphate synthase small chain CarA [Oligotropha
carboxidovorans OM5]
gi|386031053|ref|YP_005951828.1| carbamoyl-phosphate synthase small subunit [Oligotropha
carboxidovorans OM4]
gi|336096121|gb|AEI03947.1| carbamoyl-phosphate synthase small chain CarA [Oligotropha
carboxidovorans OM4]
gi|336099701|gb|AEI07524.1| carbamoyl-phosphate synthase small chain CarA [Oligotropha
carboxidovorans OM5]
Length = 396
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 59/90 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI++ NH +AVD TLP VE TH +L D + G+A V
Sbjct: 305 GHHGANHPVMDLTTGKVEITSMNHGFAVDKTTLPDNVEQTHYSLFDNSNCGIALKDKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F F ELM+ K
Sbjct: 365 SVQYHPEASPGPRDSHYLFSRFAELMREHK 394
>gi|408907279|emb|CCM11033.2| Carbamoyl-phosphate synthase small chain [Helicobacter heilmannii
ASB1.4]
Length = 342
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N+Q GR+E+SAQNHNY V P ++ K +TH NL D T G+ Y
Sbjct: 250 KFGHHGSNHPVLNLQTGRIEVSAQNHNYCV-PESIAKIATITHKNLFDHTIEGVRYKNAP 308
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H EASPGP D VF +F ++++
Sbjct: 309 IISIQHHPEASPGPHDGLYVFEEFKKVVQ 337
>gi|402782483|ref|YP_006638029.1| carbamoyl-phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|425078438|ref|ZP_18481541.1| carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|425089070|ref|ZP_18492163.1| carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|425089923|ref|ZP_18493008.1| carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|402543339|gb|AFQ67488.1| Carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|405590299|gb|EKB63833.1| carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|405600208|gb|EKB73375.1| carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|405614487|gb|EKB87186.1| carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
Length = 382
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDIDNNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIELYRQSA 381
>gi|377821311|ref|YP_004977682.1| carbamoyl-phosphate synthase small subunit [Burkholderia sp. YI23]
gi|357936146|gb|AET89705.1| carbamoyl-phosphate synthase, small subunit [Burkholderia sp. YI23]
Length = 380
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K GHHG NHPV ++++GRV I++QNH +AVD +TLP +VTH++L DGT G A
Sbjct: 286 KTGHHGANHPVKDMEDGRVVITSQNHGFAVDASTLPANAKVTHVSLFDGTLQGFALTDKP 345
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
Q H EASPGP D +F F++LM++ K A
Sbjct: 346 AFCFQGHPEASPGPHDIAYLFDRFIKLMEAQKVAA 380
>gi|290512620|ref|ZP_06551986.1| carbamoyl-phosphate synthase, small subunit [Klebsiella sp. 1_1_55]
gi|289774961|gb|EFD82963.1| carbamoyl-phosphate synthase, small subunit [Klebsiella sp. 1_1_55]
Length = 391
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 296 KFGHHGGNHPVKDIDNNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 355
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 356 AFSFQGHPEASPGPHDAAPLFDHFIELIELYRQSA 390
>gi|350570528|ref|ZP_08938881.1| carbamoyl-phosphate synthase, small subunit [Neisseria wadsworthii
9715]
gi|349796153|gb|EGZ49943.1| carbamoyl-phosphate synthase, small subunit [Neisseria wadsworthii
9715]
Length = 376
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGHHGGNHPV +++NGRV I++QNH + VD +LP V+VTH +L DG+ G+ V
Sbjct: 285 FGHHGGNHPVQDLENGRVAITSQNHGFEVDADSLPAHVKVTHRSLFDGSLQGIELTDRAV 344
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D +F F++ M++ K
Sbjct: 345 FSFQGHPEASPGPHDVAYLFDKFIDNMRAAK 375
>gi|188991523|ref|YP_001903533.1| carbamoyl phosphate synthase small subunit [Xanthomonas campestris
pv. campestris str. B100]
gi|167733283|emb|CAP51482.1| Carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Xanthomonas
campestris pv. campestris]
Length = 428
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 55/90 (61%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ GRV I++QNH +AVD TLP V VTH +L DGT G+A
Sbjct: 338 GHHGANHPVQDLDGGRVMITSQNHGFAVDETTLPANVRVTHRSLFDGTNQGIALTDAPAF 397
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D +F FVE M K
Sbjct: 398 SFQGHPEASPGPRDVGPLFDRFVESMAEAK 427
>gi|420462585|ref|ZP_14961366.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
H-3]
gi|393077986|gb|EJB78730.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
H-3]
Length = 375
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEAIEEIAVITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|333978724|ref|YP_004516669.1| carbamoyl-phosphate synthase small subunit [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333822205|gb|AEG14868.1| carbamoyl-phosphate synthase, small subunit [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 359
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV ++ G+V I++QNH +AVD +L VEV H NLNDGT G+ + L
Sbjct: 267 KFGHRGANHPVKDLATGKVYITSQNHGFAVDAGSLAGLPVEVCHRNLNDGTVEGIRHKDL 326
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP +S +F F++LM+ K
Sbjct: 327 PLFSVQYHPEASPGPRESAYLFDQFIDLMQRRK 359
>gi|421873634|ref|ZP_16305246.1| carbamoyl-phosphate synthase small chain [Brevibacillus
laterosporus GI-9]
gi|372457421|emb|CCF14795.1| carbamoyl-phosphate synthase small chain [Brevibacillus
laterosporus GI-9]
Length = 365
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPAT-LPKGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV + GR I++QNH YAV+ A+ + +EVTH+ LNDGT GL
Sbjct: 264 KFGHRGGNHPVKELLTGRTYITSQNHGYAVNEASVIGTELEVTHVALNDGTIEGLRNAKK 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EA+PGP DS +F F+++MK K
Sbjct: 324 QAFSVQYHPEAAPGPYDSGYLFDQFLDMMKQSK 356
>gi|209884276|ref|YP_002288133.1| carbamoyl phosphate synthase small subunit [Oligotropha
carboxidovorans OM5]
gi|209872472|gb|ACI92268.1| carbamoyl-phosphate synthase, small subunit [Oligotropha
carboxidovorans OM5]
Length = 377
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 59/90 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI++ NH +AVD TLP VE TH +L D + G+A V
Sbjct: 286 GHHGANHPVMDLTTGKVEITSMNHGFAVDKTTLPDNVEQTHYSLFDNSNCGIALKDKPVF 345
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F F ELM+ K
Sbjct: 346 SVQYHPEASPGPRDSHYLFSRFAELMREHK 375
>gi|116621512|ref|YP_823668.1| carbamoyl-phosphate synthase small subunit [Candidatus Solibacter
usitatus Ellin6076]
gi|116224674|gb|ABJ83383.1| carbamoyl-phosphate synthase small subunit [Candidatus Solibacter
usitatus Ellin6076]
Length = 375
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N RVEI++ NH +AVDP +L VE+TH+NLND T G + +
Sbjct: 283 KFGHRGANHPVRNEITKRVEITSHNHGFAVDPDSLNLNEVEITHVNLNDQTLEGFRHRSH 342
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V +QYH EA+PGP DS +F DF LM+ K
Sbjct: 343 PVFCVQYHPEAAPGPHDSHYLFDDFTRLMREAK 375
>gi|347530838|ref|YP_004837601.1| carbamoyl phosphate synthase small subunit [Roseburia hominis
A2-183]
gi|345500986|gb|AEN95669.1| carbamoyl phosphate synthase small subunit [Roseburia hominis
A2-183]
Length = 361
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
K+GH GGNHPV ++ RV IS+QNH Y VD TL PK +N+NDGT GL+Y
Sbjct: 269 KYGHRGGNHPVKDLATNRVYISSQNHGYVVDTDTLDPKVATPAFVNVNDGTNEGLSYVGK 328
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
N+ ++Q+H EA PGP DS +F F+ +M K
Sbjct: 329 NIFTVQFHPEACPGPQDSAYLFDRFINMMGGAK 361
>gi|404476215|ref|YP_006707646.1| carbamoyl phosphate synthase small subunit [Brachyspira pilosicoli
B2904]
gi|404437704|gb|AFR70898.1| carbamoyl phosphate synthase small subunit [Brachyspira pilosicoli
B2904]
Length = 361
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV +++ +V I++QNH+YAV+ +L + +THI+LND +C GL +
Sbjct: 264 KFGHRGGNHPVKDLETNKVSITSQNHSYAVEKESLVNTDLILTHISLNDESCEGLKHKKF 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
V S+QYH E++PGP+DS +F F+++M +
Sbjct: 324 PVFSVQYHPESNPGPEDSKYLFDKFIDMMNN 354
>gi|325282467|ref|YP_004255008.1| carbamoyl-phosphate synthase, small subunit [Deinococcus
proteolyticus MRP]
gi|324314276|gb|ADY25391.1| carbamoyl-phosphate synthase, small subunit [Deinococcus
proteolyticus MRP]
Length = 396
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEV-THINLNDGTCAGLAYPAL 59
KFGH GGN PV N+ G VEI++QNH YAVD ++P G V THINLND T G+A+
Sbjct: 287 KFGHRGGNQPVKNLLTGNVEITSQNHGYAVDIDSIPAGQFVPTHINLNDQTLEGMAHTRY 346
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVE 86
V S+QYH E++PGP DS +F F++
Sbjct: 347 PVFSVQYHPESAPGPHDSRYLFDRFIQ 373
>gi|430750491|ref|YP_007213399.1| carbamoyl-phosphate synthase small subunit [Thermobacillus composti
KWC4]
gi|430734456|gb|AGA58401.1| carbamoyl-phosphate synthase, small subunit [Thermobacillus
composti KWC4]
Length = 381
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/93 (49%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV ++ NGR I++QNH Y V ++ G+E+THIN ND T GL +
Sbjct: 264 KFGHRGGNHPVKDLVNGRCYITSQNHGYTVREDSIAGTGLEITHINNNDKTIEGLRHTKY 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F DF+ +++ K
Sbjct: 324 PAFSVQYHPEASPGPFDSSYLFDDFLAMIREHK 356
>gi|284006379|emb|CBA71615.1| carbamoyl-phosphate synthase small chain [Arsenophonus nasoniae]
Length = 388
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++ N RV I+AQNH +AVD ATL + VTH +L DG+ G+
Sbjct: 288 KFGHHGGNHPVKDLINNRVMITAQNHGFAVDEATLSDKLRVTHKSLFDGSLQGIHRTDKP 347
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
Q H EASPGP D++ +F F+EL+K KYR
Sbjct: 348 AFGFQGHPEASPGPKDAEPLFDYFIELIK--KYR 379
>gi|152998031|ref|YP_001342866.1| carbamoyl phosphate synthase small subunit [Marinomonas sp. MWYL1]
gi|150838955|gb|ABR72931.1| carbamoyl-phosphate synthase, small subunit [Marinomonas sp. MWYL1]
Length = 396
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 45/92 (48%), Positives = 59/92 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV I+ G V I++QNH +AVD TLP + +TH +L DG+ G+A +
Sbjct: 304 KFGHHGANHPVQAIEKGTVMITSQNHGFAVDEDTLPANLVMTHKSLFDGSLQGIARTDKS 363
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D +F F+E +K+ K
Sbjct: 364 AFSFQGHPEASPGPHDVAPLFDQFIENIKATK 395
>gi|238026777|ref|YP_002911008.1| carbamoyl phosphate synthase small subunit [Burkholderia glumae
BGR1]
gi|237875971|gb|ACR28304.1| Carbamoylphosphate synthase small subunit [Burkholderia glumae
BGR1]
Length = 380
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/95 (48%), Positives = 57/95 (60%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K GHHG NHPV ++ +GRV I++QNH +AVD A+LP TH++L DGT G A
Sbjct: 286 KTGHHGANHPVKDLADGRVVITSQNHGFAVDAASLPANARATHVSLFDGTLQGFALTDKP 345
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
Q H EASPGP D +F F LM + K RA
Sbjct: 346 AFCFQGHPEASPGPHDIGYLFDRFTALMDTAKARA 380
>gi|424867213|ref|ZP_18291021.1| Carbamoyl-phosphate synthase, small subunit [Leptospirillum sp.
Group II 'C75']
gi|124515273|gb|EAY56783.1| Carbamoyl-phosphate synthase, small subunit [Leptospirillum
rubarum]
gi|387222248|gb|EIJ76706.1| Carbamoyl-phosphate synthase, small subunit [Leptospirillum sp.
Group II 'C75']
Length = 365
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/87 (49%), Positives = 61/87 (70%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGHHG NHPV +++N +V I++QNHNYAVD TLP+G +L DG+ G+ + +
Sbjct: 272 FGHHGANHPVVDVRNRKVWITSQNHNYAVDEKTLPEGCSPWFRSLYDGSLEGVRFDKAPI 331
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELM 88
+S+Q+H EA+PGP D+ VF DF+ LM
Sbjct: 332 LSVQFHPEAAPGPTDAHPVFADFLRLM 358
>gi|409203803|ref|ZP_11232006.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Pseudoalteromonas flavipulchra JG1]
Length = 378
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 57/90 (63%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++ V I+AQNH +A D ATLP + TH +L DGT G+
Sbjct: 286 KFGHHGGNHPVKDLDRDVVMITAQNHGFAADEATLPDTLRATHKSLFDGTLQGIHRTDKP 345
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D+ +F F+ELM+S
Sbjct: 346 AFSFQGHPEASPGPHDAAPLFDHFIELMQS 375
>gi|295696785|ref|YP_003590023.1| carbamoyl-phosphate synthase small subunit [Kyrpidia tusciae DSM
2912]
gi|295412387|gb|ADG06879.1| carbamoyl-phosphate synthase, small subunit [Kyrpidia tusciae DSM
2912]
Length = 383
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 60/92 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV ++++GRV I+ QNH Y + P +EVTH ++NDGT GL + L
Sbjct: 284 KFGHRGSNHPVKDLRSGRVWITPQNHGYTLAEDGWPDDLEVTHRHVNDGTVEGLRHRRLP 343
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+QYH EA PGP DS +F F+ LM+ K
Sbjct: 344 VFSVQYHPEAHPGPADSFYLFEQFIALMEEGK 375
>gi|385216433|ref|YP_005776390.1| carbamoyl phosphate synthase small subunit [Helicobacter pylori
F32]
gi|317180962|dbj|BAJ58748.1| carbamoyl phosphate synthase small subunit [Helicobacter pylori
F32]
Length = 375
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY + P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLKTNAVEITAQNHNYCI-PEEIEEIAVITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|434381862|ref|YP_006703645.1| carbamoyl phosphate synthase small subunit [Brachyspira pilosicoli
WesB]
gi|404430511|emb|CCG56557.1| carbamoyl phosphate synthase small subunit [Brachyspira pilosicoli
WesB]
Length = 361
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV +++ +V I++QNH+YAV+ +L + +THI+LND +C GL +
Sbjct: 264 KFGHRGGNHPVKDLETNKVSITSQNHSYAVEKESLVNTDLILTHISLNDESCEGLKHKKF 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
V S+QYH E++PGP+DS +F F+++M +
Sbjct: 324 PVFSVQYHPESNPGPEDSKYLFDKFIDMMNN 354
>gi|420442640|ref|ZP_14941573.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
H-36]
gi|393057215|gb|EJB58118.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
H-36]
Length = 375
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEEIEEIAVITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|392543979|ref|ZP_10291116.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Pseudoalteromonas piscicida JCM 20779]
Length = 378
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 57/90 (63%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++ V I+AQNH +A D ATLP + TH +L DGT G+
Sbjct: 286 KFGHHGGNHPVKDLDRDVVMITAQNHGFAADEATLPDTLRATHKSLFDGTLQGIHRTDKP 345
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D+ +F F+ELM+S
Sbjct: 346 AFSFQGHPEASPGPHDAAPLFDHFIELMQS 375
>gi|394989173|ref|ZP_10382007.1| carbamoyl-phosphate synthase small subunit [Sulfuricella
denitrificans skB26]
gi|393791592|dbj|GAB71646.1| carbamoyl-phosphate synthase small subunit [Sulfuricella
denitrificans skB26]
Length = 376
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 60/92 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV +I +GRV I++QNH + VD TLP + VTH +L DG+ G+ +
Sbjct: 285 KFGHHGANHPVQDIDSGRVMITSQNHGFTVDETTLPANLCVTHKSLFDGSNQGITRTDVP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D+D +F F+ LM+ K
Sbjct: 345 AFSFQGHPEASPGPHDADYLFDRFIGLMQQQK 376
>gi|354558501|ref|ZP_08977756.1| carbamoyl-phosphate synthase, small subunit [Desulfitobacterium
metallireducens DSM 15288]
gi|353546979|gb|EHC16426.1| carbamoyl-phosphate synthase, small subunit [Desulfitobacterium
metallireducens DSM 15288]
Length = 375
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/89 (51%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
K+GH GGN PV ++Q +V I++QNH YAV +L +EVTH NLND T G+ + +L
Sbjct: 278 KYGHRGGNQPVQDLQTEKVTITSQNHGYAVAEVSLSGTELEVTHRNLNDQTVEGMKHTSL 337
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
V S+QYH EA PGP+DS +F F ELM
Sbjct: 338 PVFSVQYHPEAGPGPNDSLYLFDQFAELM 366
>gi|451936267|ref|YP_007460121.1| carbamoyl-phosphate synthase small subunit [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777190|gb|AGF48165.1| carbamoyl-phosphate synthase small subunit [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 383
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 57/92 (61%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K GHHG NHPV ++QN RV I++QNH +AVDP TLP VTH++L DG+ G A
Sbjct: 292 KTGHHGANHPVQDLQNKRVFITSQNHGFAVDPMTLPDNAYVTHVSLFDGSLQGFAMSDRP 351
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
Q H EASPGP D +F F+ LM S K
Sbjct: 352 AFCFQGHPEASPGPVDIAILFDKFISLMGSGK 383
>gi|433446176|ref|ZP_20410235.1| carbamoyl-phosphate synthase small chain [Anoxybacillus
flavithermus TNO-09.006]
gi|432000472|gb|ELK21366.1| carbamoyl-phosphate synthase small chain [Anoxybacillus
flavithermus TNO-09.006]
Length = 364
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV ++Q G+V I++QNH Y V +L +EVTHI LNDGT GL + +
Sbjct: 264 KFGHRGSNHPVKHLQTGKVAITSQNHGYTVTEQSLCHTRLEVTHIALNDGTIEGLRHRDV 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
++QYH EASPGP+D++ +F DF+ +++ K
Sbjct: 324 PAFTVQYHPEASPGPEDANGLFDDFIAMIEQFK 356
>gi|422303367|ref|ZP_16390718.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9806]
gi|389791638|emb|CCI12537.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9806]
Length = 382
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P Q +VEI++QNH +AV A+L VE+TH+NLND T AGL + +L
Sbjct: 289 KFGHRGLNQPCGLRQ--QVEITSQNHGFAVQEASLNPEVEITHLNLNDRTVAGLKHRSLP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+D +F FV+LM+ K
Sbjct: 347 FFSVQYHPEASPGPHDADYLFGKFVDLMRQAK 378
>gi|437999836|ref|YP_007183569.1| carbamoyl-phosphate synthase small chain [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451812739|ref|YP_007449192.1| carbamoyl-phosphate synthase small subunit [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|429339070|gb|AFZ83492.1| carbamoyl-phosphate synthase small chain [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451778708|gb|AGF49588.1| carbamoyl-phosphate synthase small subunit [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 383
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 57/92 (61%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K GHHG NHPV ++Q+ RV I++QNH +AVDP TLP VTHI+L DG+ G A
Sbjct: 292 KTGHHGANHPVQDLQSKRVFITSQNHGFAVDPTTLPNNAYVTHISLFDGSLQGFAMLDRP 351
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
Q H EASPGP D +F F+ LM + K
Sbjct: 352 AFCFQGHPEASPGPVDIAILFDKFISLMGAGK 383
>gi|428210172|ref|YP_007094525.1| carbamoyl-phosphate synthase small subunit [Chroococcidiopsis
thermalis PCC 7203]
gi|428012093|gb|AFY90656.1| carbamoyl-phosphate synthase small subunit [Chroococcidiopsis
thermalis PCC 7203]
Length = 378
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P +Q +VEI++QNH +A+D ++P VE+TH+NLND T AGL + +L
Sbjct: 285 KFGHRGLNQPA-GLQR-QVEITSQNHGFAIDADSIPADVEITHLNLNDRTVAGLRHKSLP 342
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP D+D +F +FV+ M+ +
Sbjct: 343 LFSVQYHPEASPGPHDADYLFANFVKSMRQSR 374
>gi|9106061|gb|AAF83916.1|AE003946_7 carbamoyl-phosphate synthase small chain [Xylella fastidiosa 9a5c]
Length = 399
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 60/90 (66%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
+ GHHG NHPV ++++GRV I++QNH +AVD ATLP V VTH +L DGT G+ +
Sbjct: 308 RHGHHGANHPVQDLRSGRVMITSQNHGFAVDEATLPSNVRVTHRSLFDGTNQGIELLDVP 367
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D D +F F+ +M +
Sbjct: 368 AFSFQGHPEASPGPHDVDVLFDRFITMMAA 397
>gi|420455770|ref|ZP_14954596.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
A-14]
gi|393071408|gb|EJB72192.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
A-14]
Length = 375
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLKTNAVEITAQNHNYCV-PEAIEEIAIITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|339009233|ref|ZP_08641805.1| carbamoyl-phosphate synthase pyrimidine-specific small chain
[Brevibacillus laterosporus LMG 15441]
gi|338773711|gb|EGP33242.1| carbamoyl-phosphate synthase pyrimidine-specific small chain
[Brevibacillus laterosporus LMG 15441]
Length = 365
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPAT-LPKGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV + GR I++QNH YAV+ A+ + +EVTH+ LNDGT GL
Sbjct: 264 KFGHRGGNHPVKELITGRTYITSQNHGYAVNEASVIGTELEVTHVALNDGTIEGLRNAKK 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EA+PGP DS +F F+++MK K
Sbjct: 324 QAFSVQYHPEAAPGPYDSGYLFGQFLDMMKQSK 356
>gi|300869896|ref|YP_003784767.1| carbamoyl phosphate synthase small subunit [Brachyspira pilosicoli
95/1000]
gi|431807044|ref|YP_007233942.1| carbamoyl phosphate synthase small subunit [Brachyspira pilosicoli
P43/6/78]
gi|300687595|gb|ADK30266.1| carbamoyl phosphate synthase small subunit [Brachyspira pilosicoli
95/1000]
gi|430780403|gb|AGA65687.1| carbamoyl phosphate synthase small subunit [Brachyspira pilosicoli
P43/6/78]
Length = 361
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPK-GVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV +++ +V I++QNH+YAV+ +L + +THI+LND +C GL +
Sbjct: 264 KFGHRGGNHPVKDLETNKVSITSQNHSYAVEKESLVNTDLILTHISLNDESCEGLKHKKF 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
V S+QYH E++PGP+DS +F F+++M +
Sbjct: 324 PVFSVQYHPESNPGPEDSKYLFDKFIDMMNN 354
>gi|51246947|ref|YP_066831.1| carbamoyl phosphate synthase small subunit [Desulfotalea
psychrophila LSv54]
gi|50877984|emb|CAG37824.1| probable carbamoyl-phosphate synthase, small subunit [Desulfotalea
psychrophila LSv54]
Length = 384
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGN PV N++ G+VEI++QNH + +D +L + V++THINLND + G+ +
Sbjct: 294 KFGHRGGNQPVKNLETGKVEITSQNHGFCIDTTSLNEEDVKITHINLNDNSVEGMRHRKF 353
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
S+QYH E +PGP D+ +F +F+E+M+
Sbjct: 354 PAFSVQYHPEHAPGPHDATYLFDEFIEMMQ 383
>gi|452752435|ref|ZP_21952177.1| Carbamoyl-phosphate synthase small chain [alpha proteobacterium
JLT2015]
gi|451960162|gb|EMD82576.1| Carbamoyl-phosphate synthase small chain [alpha proteobacterium
JLT2015]
Length = 389
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 55/84 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G NHPV + +GRVEI++ NH +AVD +LP V THI+L DGT G+
Sbjct: 303 GHRGANHPVKRLSDGRVEITSMNHGFAVDADSLPANVTATHISLFDGTLCGIELTDKRAF 362
Query: 63 SLQYHLEASPGPDDSDCVFRDFVE 86
+QYH EASPGP DSD +F +FV+
Sbjct: 363 GVQYHPEASPGPQDSDYLFENFVK 386
>gi|315303748|ref|ZP_07874254.1| carbamoyl-phosphate synthase, small subunit [Listeria ivanovii FSL
F6-596]
gi|313627880|gb|EFR96507.1| carbamoyl-phosphate synthase, small subunit [Listeria ivanovii FSL
F6-596]
Length = 363
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV + GRV+ +AQNH YAVD +L +++THI +ND T GLA+
Sbjct: 265 KFGHRGANHPVKELATGRVDFTAQNHGYAVDKGSLLDTDLKITHIEINDDTVEGLAHKEF 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
++QYH EA+PGP D + +F +F+E+M
Sbjct: 325 QAYTVQYHPEANPGPSDVNYLFDEFMEMM 353
>gi|217032250|ref|ZP_03437748.1| hypothetical protein HPB128_2g52 [Helicobacter pylori B128]
gi|298735743|ref|YP_003728268.1| carbamoyl-phosphate synthase small subunit [Helicobacter pylori B8]
gi|216946121|gb|EEC24732.1| hypothetical protein HPB128_2g52 [Helicobacter pylori B128]
gi|298354932|emb|CBI65804.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori B8]
Length = 375
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLKTNAVEITAQNHNYCV-PEAIEEIAIITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|225375970|ref|ZP_03753191.1| hypothetical protein ROSEINA2194_01607 [Roseburia inulinivorans DSM
16841]
gi|225212223|gb|EEG94577.1| hypothetical protein ROSEINA2194_01607 [Roseburia inulinivorans DSM
16841]
Length = 364
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
K+GH GGNHPV +++ RV IS+QNH Y VD TL P + +N+NDGT GL Y
Sbjct: 275 KYGHRGGNHPVKDLKTNRVYISSQNHGYVVDTDTLDPNIAKPAFVNVNDGTNEGLEYVGK 334
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
N+ ++Q+H EA PGP DS +F F+E+M
Sbjct: 335 NIFTVQFHPEACPGPQDSGYLFDRFIEMM 363
>gi|395241815|ref|ZP_10418818.1| Carbamoyl-phosphate synthase, small chain [Lactobacillus pasteurii
CRBIP 24.76]
gi|394480829|emb|CCI85058.1| Carbamoyl-phosphate synthase, small chain [Lactobacillus pasteurii
CRBIP 24.76]
Length = 360
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 60/92 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV I G + ++QNH YAVDP ++P + VTH+ +NDGT GL +
Sbjct: 263 KFGHRGFNHPVREIATGNIGFTSQNHGYAVDPESIPADLMVTHVEVNDGTVEGLRHKRYP 322
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H +A+PGP D + +F DF++++ K
Sbjct: 323 AFSVQFHPDATPGPHDEESLFDDFMDMIDQRK 354
>gi|332982121|ref|YP_004463562.1| carbamoyl-phosphate synthase small subunit [Mahella australiensis
50-1 BON]
gi|332699799|gb|AEE96740.1| carbamoyl-phosphate synthase small subunit [Mahella australiensis
50-1 BON]
Length = 355
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV + GRV I++QNHNYA+ K VTHINLND T G +
Sbjct: 268 KFGHHGGNHPVKDFNKGRVYITSQNHNYALRD-DFCKQATVTHINLNDNTVEGFVHNEYP 326
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
++S+QYH EASPGP DS +F +FV +M
Sbjct: 327 IISVQYHPEASPGPHDSAYMFDEFVGMM 354
>gi|16127066|ref|NP_421630.1| carbamoyl phosphate synthase small subunit [Caulobacter crescentus
CB15]
gi|221235861|ref|YP_002518298.1| carbamoyl phosphate synthase small subunit [Caulobacter crescentus
NA1000]
gi|21759047|sp|Q9A4J7.1|CARA_CAUCR RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|13424444|gb|AAK24798.1| carbamoyl-phosphate synthase, small subunit [Caulobacter crescentus
CB15]
gi|220965034|gb|ACL96390.1| carbamoyl-phosphate synthase small chain [Caulobacter crescentus
NA1000]
Length = 388
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI + NH + VD A+LP V+ TH++L DGT AG+A V
Sbjct: 299 GHHGANHPVKDLTTGKVEIVSMNHGFTVDTASLPAPVKETHVSLFDGTNAGIALDGKPVF 358
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +F F LM + K
Sbjct: 359 SVQHHPEASPGPTDSLYLFERFAGLMDAAK 388
>gi|145219037|ref|YP_001129746.1| carbamoyl phosphate synthase small subunit [Chlorobium
phaeovibrioides DSM 265]
gi|145205201|gb|ABP36244.1| carbamoyl-phosphate synthase small subunit [Chlorobium
phaeovibrioides DSM 265]
Length = 369
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 59/92 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N+ +EI++QNH +AV +LP + +TH+NL D T G+ + L
Sbjct: 277 KFGHHGSNHPVKNMATKSIEITSQNHGFAVSMDSLPDSLAMTHLNLYDNTVEGIMHSELP 336
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EA+PGP DS +F +F +M K
Sbjct: 337 CFSVQYHPEAAPGPHDSHYLFDEFTAMMDQAK 368
>gi|406831427|ref|ZP_11091021.1| carbamoyl phosphate synthase small subunit [Schlesneria paludicola
DSM 18645]
Length = 391
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 57/88 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N PV N GRVEI++QNH +A+ TLPK +EVTH+NLND T GL +
Sbjct: 301 KFGHRGANQPVLNQDTGRVEITSQNHGFAIASETLPKVLEVTHLNLNDRTIEGLRHREFP 360
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
+QYH EAS GP DS +F F ++M
Sbjct: 361 AFCVQYHPEASAGPHDSGYLFETFHQMM 388
>gi|189219573|ref|YP_001940214.1| carbamoylphosphate synthase small subunit [Methylacidiphilum
infernorum V4]
gi|189186431|gb|ACD83616.1| Carbamoylphosphate synthase small subunit [Methylacidiphilum
infernorum V4]
Length = 409
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 41/94 (43%), Positives = 65/94 (69%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
+FGH G NHPV N+ + ++I++QNH YAV +LP+G++++ INLNDGT G + +L
Sbjct: 311 RFGHRGANHPVKNLFDSTIKITSQNHGYAVCADSLPEGLKISEINLNDGTIEGFIHESLP 370
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
+ S+QYH EA+PGP D+ F+ F +++ K +
Sbjct: 371 LFSVQYHPEAAPGPHDALDYFKLFFNKVQNDKSK 404
>gi|253997073|ref|YP_003049137.1| carbamoyl-phosphate synthase small subunit [Methylotenera mobilis
JLW8]
gi|253983752|gb|ACT48610.1| carbamoyl-phosphate synthase, small subunit [Methylotenera mobilis
JLW8]
Length = 379
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 60/90 (66%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV +++ RV I++QNH +A D TLP V+VTH++L DG+ G+A
Sbjct: 289 KFGHHGANHPVQDVETKRVYITSQNHGFAADVDTLPANVKVTHVSLFDGSLQGIARTDKP 348
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP + +F F++LM++
Sbjct: 349 AFSFQGHPEASPGPTEMSYLFDKFIDLMRA 378
>gi|240143310|ref|ZP_04741911.1| carbamoyl-phosphate synthase, small subunit [Roseburia intestinalis
L1-82]
gi|257204680|gb|EEV02965.1| carbamoyl-phosphate synthase, small subunit [Roseburia intestinalis
L1-82]
gi|291536828|emb|CBL09940.1| carbamoyl-phosphate synthase, small subunit [Roseburia intestinalis
M50/1]
Length = 352
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
K+GH GGNHPV +++ GRV IS+QNH Y VD TL P + +N+NDGT GL+Y
Sbjct: 264 KYGHRGGNHPVKDLETGRVYISSQNHGYVVDTDTLDPVIAKPAFVNVNDGTNEGLSYVGK 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
N+ ++Q+H EA PGP DS +F F+ +M
Sbjct: 324 NIFTVQFHPEACPGPQDSAYLFDRFISMM 352
>gi|407793784|ref|ZP_11140815.1| carbamoyl phosphate synthase small subunit [Idiomarina xiamenensis
10-D-4]
gi|407213938|gb|EKE83789.1| carbamoyl phosphate synthase small subunit [Idiomarina xiamenensis
10-D-4]
Length = 385
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 61/90 (67%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV + +GRV I++QNH +AVD A+LP +++TH++L DGT G+
Sbjct: 294 KFGHHGANHPVKDEHSGRVMITSQNHGFAVDQASLPDNLKITHVSLFDGTLQGIHRTDKP 353
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D+ +F F+ELM +
Sbjct: 354 AFSFQGHPEASPGPHDAAPLFDHFIELMSA 383
>gi|410479432|ref|YP_006767069.1| carbamoylphosphate synthase small subunit [Leptospirillum
ferriphilum ML-04]
gi|406774684|gb|AFS54109.1| carbamoylphosphate synthase small subunit [Leptospirillum
ferriphilum ML-04]
Length = 330
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 61/88 (69%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGHHG NHPV +++N +V I++QNHNYAVD TLP+G +L DG+ G+ + +
Sbjct: 237 FGHHGANHPVVDVRNRKVWITSQNHNYAVDEKTLPEGCSPWFRSLYDGSLEGVRFDKAPI 296
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMK 89
+S+Q+H EA+PGP D+ VF DF+ LM
Sbjct: 297 LSVQFHPEAAPGPTDAHPVFTDFLRLMS 324
>gi|403388619|ref|ZP_10930676.1| carbamoyl phosphate synthase small subunit [Clostridium sp. JC122]
Length = 348
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ ++ I++QNH Y V+ LPK + +TH+++NDGTC G+ +
Sbjct: 263 KFGHRGCNHPVKDLEENKIHITSQNHGYMVE--KLPKDMVMTHVSVNDGTCEGMRHKIFP 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
+ S+QYH EASPGP D+ +F F++++
Sbjct: 321 IFSVQYHPEASPGPHDASYIFDKFLKML 348
>gi|206601577|gb|EDZ38060.1| Carbamoyl-phosphate synthase, small subunit [Leptospirillum sp.
Group II '5-way CG']
Length = 365
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 43/87 (49%), Positives = 61/87 (70%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGHHG NHPV +++N +V I++QNHNYAVD TLP+G +L DG+ G+ + +
Sbjct: 272 FGHHGANHPVVDVRNRKVWITSQNHNYAVDEKTLPEGCSPWFRSLYDGSLEGVRFDKAPI 331
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELM 88
+S+Q+H EA+PGP D+ VF DF+ LM
Sbjct: 332 LSVQFHPEAAPGPTDAHPVFTDFLRLM 358
>gi|393769676|ref|ZP_10358197.1| carbamoyl-phosphate synthase small subunit [Methylobacterium sp.
GXF4]
gi|392724855|gb|EIZ82199.1| carbamoyl-phosphate synthase small subunit [Methylobacterium sp.
GXF4]
Length = 410
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/88 (51%), Positives = 57/88 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVDPA+LP TH++L DG+ GL
Sbjct: 314 GHHGANHPVKDKTTGKVEIVSMNHGFAVDPASLPASAVETHVSLFDGSNCGLTLTDRPAF 373
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+Q+H EASPGP DS +F FV LM+S
Sbjct: 374 SVQHHPEASPGPRDSHYLFERFVTLMRS 401
>gi|403234864|ref|ZP_10913450.1| carbamoyl phosphate synthase small subunit [Bacillus sp. 10403023]
Length = 366
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 67/96 (69%), Gaps = 7/96 (7%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLA---Y 56
KFGH G NHPV ++++G+V I++QNH Y V +L +EVTHI LNDGT GL Y
Sbjct: 264 KFGHRGSNHPVKHLESGKVAITSQNHGYTVKEESLVSTRLEVTHIALNDGTVEGLRHLDY 323
Query: 57 PALNVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
PA V QYH EASPGP+D++ +F DF++++++ K
Sbjct: 324 PAFTV---QYHPEASPGPEDANSLFNDFLQMIENFK 356
>gi|326796871|ref|YP_004314691.1| carbamoyl-phosphate synthase small subunit [Marinomonas
mediterranea MMB-1]
gi|326547635|gb|ADZ92855.1| carbamoyl-phosphate synthase, small subunit [Marinomonas
mediterranea MMB-1]
Length = 376
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/92 (48%), Positives = 58/92 (63%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV +I G V I++QNH +AVD +LP +E TH +L DG+ G+A
Sbjct: 284 KFGHHGANHPVQDIAKGIVMITSQNHGFAVDEDSLPANLEATHKSLFDGSLQGIARTDKK 343
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D +F F+E +K+ K
Sbjct: 344 AFSFQGHPEASPGPHDVAPLFDQFIENIKATK 375
>gi|310659728|ref|YP_003937449.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [[Clostridium] sticklandii]
gi|308826506|emb|CBH22544.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [[Clostridium] sticklandii]
Length = 360
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +I+ +V I++QNH Y V + LP+ E+THI+LND + G+ + L
Sbjct: 271 KFGHRGCNHPVKDIRKNKVYITSQNHGYHV--SKLPEDFEITHISLNDESVEGMKHKTLP 328
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S+Q+H EASPGP +S +F +F+EL K
Sbjct: 329 VFSVQFHPEASPGPVESSYLFDEFIELAK 357
>gi|239826548|ref|YP_002949172.1| carbamoyl phosphate synthase small subunit [Geobacillus sp. WCH70]
gi|239806841|gb|ACS23906.1| carbamoyl-phosphate synthase, small subunit [Geobacillus sp. WCH70]
Length = 364
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 65/99 (65%), Gaps = 7/99 (7%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLA---Y 56
KFGH G NHPV ++ G+V I++QNH+Y V +L +EVTHI LNDGT GL Y
Sbjct: 264 KFGHRGSNHPVKHLATGKVAITSQNHSYTVKKESLQHTRLEVTHIALNDGTVEGLRHLDY 323
Query: 57 PALNVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
PA V QYH EASPGP+D + +F +F+E+++ K +
Sbjct: 324 PAFTV---QYHPEASPGPEDDNSLFDEFIEMIREFKKKG 359
>gi|372269112|ref|ZP_09505160.1| carbamoyl-phosphate synthase, small subunit [Alteromonas sp. S89]
Length = 379
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 61/92 (66%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++ + +V I+AQNH +AVD +LP VE+TH +L DGT G+
Sbjct: 288 KFGHHGGNHPVQDLNSTKVMITAQNHGFAVDMDSLPDNVEITHKSLFDGTLQGIRLTDKP 347
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D +F F+E+M++ +
Sbjct: 348 AFSFQGHPEASPGPHDVAPLFDQFIEMMEARR 379
>gi|182420044|ref|ZP_02951278.1| carbamoyl-phosphate synthase, small subunit [Clostridium butyricum
5521]
gi|237669585|ref|ZP_04529565.1| carbamoyl-phosphate synthase, small subunit [Clostridium butyricum
E4 str. BoNT E BL5262]
gi|182376081|gb|EDT73668.1| carbamoyl-phosphate synthase, small subunit [Clostridium butyricum
5521]
gi|237655029|gb|EEP52589.1| carbamoyl-phosphate synthase, small subunit [Clostridium butyricum
E4 str. BoNT E BL5262]
Length = 349
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV +++ V I++QNH Y V+ TLP+ +EVTH+N+NDGT G+ + L
Sbjct: 263 KFGHRGCNHPVKDLEENIVHITSQNHGYVVE--TLPENMEVTHVNINDGTVEGMKHKDLP 320
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVE 86
+ S+Q+H EAS GP DS+ +F F++
Sbjct: 321 IYSVQFHPEASAGPKDSEYIFDKFLK 346
>gi|414152979|ref|ZP_11409306.1| Carbamoyl-phosphate synthase small chain [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411455361|emb|CCO07208.1| Carbamoyl-phosphate synthase small chain [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 359
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 60/85 (70%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV ++ +GRV I++QNH +AV +LP V V+H+NLND T GL + L
Sbjct: 266 KFGHRGANHPVKDLVSGRVYITSQNHGFAVAAESLPPDVAVSHLNLNDNTVEGLCHKYLP 325
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFV 85
V S+QYH EA+PGP DS+ +F F+
Sbjct: 326 VFSVQYHPEAAPGPMDSEYLFDRFL 350
>gi|392977549|ref|YP_006476137.1| carbamoyl phosphate synthase small subunit [Enterobacter cloacae
subsp. dissolvens SDM]
gi|392323482|gb|AFM58435.1| carbamoyl phosphate synthase small subunit [Enterobacter cloacae
subsp. dissolvens SDM]
Length = 382
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD A++P + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDIDNNTVMITAQNHGFAVDEASMPANLRVTHKSLFDGTLQGIHRTDKA 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|407781741|ref|ZP_11128958.1| carbamoyl-phosphate synthase small subunit [Oceanibaculum indicum
P24]
gi|407207367|gb|EKE77304.1| carbamoyl-phosphate synthase small subunit [Oceanibaculum indicum
P24]
Length = 395
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 59/86 (68%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G NHPV + + G+VEI++QNH + V P TLP VEVTH++L DGT GL V
Sbjct: 307 GHRGANHPVRDNETGKVEITSQNHGFVVLPDTLPDNVEVTHVSLFDGTVEGLKVRGKPVF 366
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELM 88
S+Q+H EASPGP DS +F FV++M
Sbjct: 367 SVQHHPEASPGPHDSHYLFTRFVDMM 392
>gi|395783989|ref|ZP_10463837.1| carbamoyl-phosphate synthase small chain [Bartonella melophagi
K-2C]
gi|395425257|gb|EJF91427.1| carbamoyl-phosphate synthase small chain [Bartonella melophagi
K-2C]
Length = 398
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 46/93 (49%), Positives = 62/93 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI++ NH++ VD A+LPK VE THI+L DG+ G+ V
Sbjct: 306 GHHGANHPVKDLTTGKVEITSMNHSFTVDAASLPKHVEETHISLFDGSNCGIQIIGKPVF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+Q+H EASPGP DS +F+ F L+ K A
Sbjct: 366 SVQHHPEASPGPQDSQYLFQRFHNLIVEYKKTA 398
>gi|218245264|ref|YP_002370635.1| carbamoyl phosphate synthase small subunit [Cyanothece sp. PCC
8801]
gi|257058297|ref|YP_003136185.1| carbamoyl phosphate synthase small subunit [Cyanothece sp. PCC
8802]
gi|218165742|gb|ACK64479.1| carbamoyl-phosphate synthase, small subunit [Cyanothece sp. PCC
8801]
gi|256588463|gb|ACU99349.1| carbamoyl-phosphate synthase, small subunit [Cyanothece sp. PCC
8802]
Length = 380
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 48/92 (52%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P N VEI++QNH +AV +L VE+TH+NLND T AGL++ L
Sbjct: 290 KFGHRGLNQPCG--LNQEVEITSQNHGFAVTDKSLGADVEITHLNLNDHTIAGLSHKTLP 347
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+D +F FV LM+ K
Sbjct: 348 FFSVQYHPEASPGPHDADYLFEKFVNLMREHK 379
>gi|113475946|ref|YP_722007.1| carbamoyl phosphate synthase small subunit [Trichodesmium
erythraeum IMS101]
gi|110166994|gb|ABG51534.1| carbamoyl-phosphate synthase small subunit [Trichodesmium
erythraeum IMS101]
Length = 384
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P Q RVEI++QNH +A++ +L +E+TH+NLND T AGL + +L
Sbjct: 289 KFGHRGLNQPAGLQQ--RVEITSQNHGFAINADSLVAELEITHLNLNDQTVAGLRHKSLP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP D+D +F FV+ MK +
Sbjct: 347 LFSVQYHPEASPGPHDADYLFERFVQAMKDTR 378
>gi|24372724|ref|NP_716766.1| carbamoyl-phosphate synthase small subunit CarA [Shewanella
oneidensis MR-1]
gi|31563000|sp|Q8EHS6.1|CARA_SHEON RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|24346790|gb|AAN54211.1| carbamoyl-phosphate synthase small subunit CarA [Shewanella
oneidensis MR-1]
Length = 386
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV NI+ G V I++QNH +A D ATLP ++VTH +L DG+ G+
Sbjct: 291 KFGHHGANHPVSNIEKGNVMITSQNHGFAADEATLPANIKVTHKSLFDGSLQGIHLTDKP 350
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP+D+ +F F+EL++ + A
Sbjct: 351 AFSFQGHPEASPGPNDAAPLFDHFIELIEHYRQNA 385
>gi|288549351|ref|ZP_05966821.2| hypothetical protein ENTCAN_05165 [Enterobacter cancerogenus ATCC
35316]
gi|288318791|gb|EFC57729.1| carbamoyl-phosphate synthase, small subunit [Enterobacter
cancerogenus ATCC 35316]
Length = 391
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD AT+P + VTH +L DGT G+
Sbjct: 296 KFGHHGGNHPVKDIDNDTVMITAQNHGFAVDEATMPANLRVTHKSLFDGTLQGIHRTDKP 355
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 356 AFSFQGHPEASPGPHDAAPLFDHFIELIEHYRKTA 390
>gi|381168526|ref|ZP_09877720.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Phaeospirillum molischianum DSM 120]
gi|380682386|emb|CCG42538.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Phaeospirillum molischianum DSM 120]
Length = 401
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 43/90 (47%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G NHPV ++ G+VEI++QNH + VD A+LP G VTH +L DG+ G+A +
Sbjct: 312 GHRGANHPVKDLATGKVEITSQNHGFVVDEASLPAGTVVTHRSLFDGSVEGIAVEGKPIF 371
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+ +F F+E + + K
Sbjct: 372 SVQYHPEASPGPQDAHYLFDRFIEKIAASK 401
>gi|339017545|ref|ZP_08643696.1| carbamoyl-phosphate synthase small subunit [Acetobacter tropicalis
NBRC 101654]
gi|338753257|dbj|GAA07000.1| carbamoyl-phosphate synthase small subunit [Acetobacter tropicalis
NBRC 101654]
Length = 468
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 44/88 (50%), Positives = 57/88 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G N PV ++ GRVEI++QNH +AVD +LP VTH++L DG+ GLA
Sbjct: 376 GHRGANQPVKDLSTGRVEITSQNHGFAVDADSLPADAHVTHVSLFDGSNEGLASDRYAAF 435
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S+QYH EASPGP DS +F FV L+ +
Sbjct: 436 SVQYHPEASPGPSDSYYLFERFVALIDA 463
>gi|109948116|ref|YP_665344.1| carbamoyl phosphate synthase small subunit [Helicobacter
acinonychis str. Sheeba]
gi|123066092|sp|Q17VI1.1|CARA_HELAH RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|109715337|emb|CAK00345.1| carbamoyl-phosphate synthase small chain [Helicobacter acinonychis
str. Sheeba]
Length = 379
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + K +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEAIEKIATITHRNLFDNTIEGVHYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
++S+Q+H E+SPGP +S +F++FV+L+++ R
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVKLLENFPTR 378
>gi|399025642|ref|ZP_10727632.1| carbamoyl-phosphate synthase, small subunit [Chryseobacterium sp.
CF314]
gi|398077615|gb|EJL68583.1| carbamoyl-phosphate synthase, small subunit [Chryseobacterium sp.
CF314]
Length = 357
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 45/93 (48%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEV-THINLNDGTCAGLAYPAL 59
KFGH GGNHPV +++ +V I++QNH YAVD +L + THI LND T GL +
Sbjct: 264 KFGHRGGNHPVLDLEKNKVSITSQNHGYAVDQESLKDTDLIETHIALNDRTNEGLKHKIY 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP+D++ +F +F++LM++ K
Sbjct: 324 PCFSVQYHPEASPGPEDANYLFDEFIDLMENFK 356
>gi|28198315|ref|NP_778629.1| carbamoyl phosphate synthase small subunit [Xylella fastidiosa
Temecula1]
gi|386084475|ref|YP_006000757.1| carbamoyl phosphate synthase small subunit [Xylella fastidiosa
subsp. fastidiosa GB514]
gi|417558863|ref|ZP_12209822.1| Carbamoylphosphate synthase small subunit [Xylella fastidiosa
EB92.1]
gi|31562991|sp|Q87EB9.1|CARA_XYLFT RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|28056385|gb|AAO28278.1| carbamoyl-phosphate synthase small chain [Xylella fastidiosa
Temecula1]
gi|307579422|gb|ADN63391.1| carbamoyl phosphate synthase small subunit [Xylella fastidiosa
subsp. fastidiosa GB514]
gi|338178445|gb|EGO81431.1| Carbamoylphosphate synthase small subunit [Xylella fastidiosa
EB92.1]
Length = 374
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 59/88 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++++GRV I++QNH +AVD ATLP V VTH +L DGT G+ +
Sbjct: 285 GHHGANHPVQDLRSGRVMITSQNHGFAVDEATLPNNVRVTHRSLFDGTNQGIELLDVPAF 344
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D D +F F+ +M +
Sbjct: 345 SFQGHPEASPGPHDVDVLFDRFITMMAA 372
>gi|376262886|ref|YP_005149606.1| carbamoyl-phosphate synthase small subunit [Clostridium sp.
BNL1100]
gi|373946880|gb|AEY67801.1| carbamoyl-phosphate synthase, small subunit [Clostridium sp.
BNL1100]
Length = 351
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV + GR I++QNHNYA+D ++ + +TH N+ND T G + L
Sbjct: 265 KFGHHGGNHPVKDYITGRCYITSQNHNYAIDSSS-NDDIVITHRNVNDDTIEGFRHKTLP 323
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
++S+QYH EA+PGP DS +F DFV+++
Sbjct: 324 LISVQYHPEAAPGPQDSAYIFDDFVKML 351
>gi|291515968|emb|CBK65178.1| carbamoyl-phosphate synthase small subunit [Alistipes shahii WAL
8301]
Length = 363
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ G++EI++QNH+YAVD +L G+ +TH+NL DGT G+ A
Sbjct: 269 KFGHRGANHPVKNLVTGKLEITSQNHSYAVDVDSLAGTGLTLTHVNLLDGTAEGVECAAD 328
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S+QYH E++ GP DS +F+ F ++M+
Sbjct: 329 RVFSMQYHPESASGPQDSAYLFKKFTKIME 358
>gi|420420921|ref|ZP_14920005.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori
NQ4161]
gi|393035720|gb|EJB36764.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori
NQ4161]
Length = 375
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLKTNAVEITAQNHNYCV-PEDIEEIAVITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|291086108|ref|ZP_06354835.2| carbamoyl-phosphate synthase, small subunit [Citrobacter youngae
ATCC 29220]
gi|291069391|gb|EFE07500.1| carbamoyl-phosphate synthase, small subunit [Citrobacter youngae
ATCC 29220]
Length = 391
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD A++P + VTH +L DGT G+
Sbjct: 296 KFGHHGGNHPVKDIDNNTVMITAQNHGFAVDEASMPANLRVTHKSLFDGTLQGIHRTDKP 355
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 356 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRQSA 390
>gi|420427529|ref|ZP_14926572.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
A-9]
gi|393041027|gb|EJB42044.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
A-9]
Length = 375
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLKTNAVEITAQNHNYCV-PEDIEEIAIITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|417864445|ref|ZP_12509491.1| hypothetical protein C22711_1378 [Escherichia coli O104:H4 str.
C227-11]
gi|341917734|gb|EGT67349.1| hypothetical protein C22711_1378 [Escherichia coli O104:H4 str.
C227-11]
Length = 97
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 2 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 61
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 62 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 96
>gi|167765822|ref|ZP_02437875.1| hypothetical protein CLOSS21_00313 [Clostridium sp. SS2/1]
gi|167712539|gb|EDS23118.1| carbamoyl-phosphate synthase, small subunit [Clostridium sp. SS2/1]
gi|291559180|emb|CBL37980.1| carbamoyl-phosphate synthase, small subunit [butyrate-producing
bacterium SSC/2]
Length = 359
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 43/93 (46%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
++GH GGNHPV ++++GRV IS+QNH Y + T+ P EV+ IN+ND T GL Y
Sbjct: 265 RWGHRGGNHPVKDLKSGRVYISSQNHGYVIKEETIDPDVAEVSFINVNDKTIEGLDYKNK 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
N+ ++Q+H EA PGP D+ +F +F++ MK K
Sbjct: 325 NIRTVQFHPEACPGPQDTAYLFDEFMDRMKGAK 357
>gi|407452336|ref|YP_006724061.1| Carbamoylphosphate synthase small subunit [Riemerella anatipestifer
RA-CH-1]
gi|403313320|gb|AFR36161.1| Carbamoylphosphate synthase small subunit [Riemerella anatipestifer
RA-CH-1]
Length = 361
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV +++ +V I++QNH YA+D +L +E THI LND T G+ +
Sbjct: 264 KFGHRGGNHPVLDLRTNKVAITSQNHGYAIDQESLKDTDLEETHIALNDRTNEGVRHKKY 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP+D++ +F +FVE+MK K
Sbjct: 324 PCFSVQYHPEASPGPEDANYLFDEFVEMMKEWK 356
>gi|237729328|ref|ZP_04559809.1| carbamoyl phosphate synthase small subunit [Citrobacter sp. 30_2]
gi|226909057|gb|EEH94975.1| carbamoyl phosphate synthase small subunit [Citrobacter sp. 30_2]
Length = 391
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD A++P + VTH +L DGT G+
Sbjct: 296 KFGHHGGNHPVKDIDNNTVMITAQNHGFAVDEASMPANLRVTHKSLFDGTLQGIHRTDKP 355
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 356 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRQSA 390
>gi|169838461|ref|ZP_02871649.1| carbamoyl phosphate synthase small subunit [candidate division TM7
single-cell isolate TM7a]
Length = 189
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPALN 60
FGH G N PV N+Q G+V+I+AQNH +AVD +L +E+THI +ND TC G+ +
Sbjct: 92 FGHRGANQPVLNLQTGKVDITAQNHGFAVDIDSLEGTDLELTHIAVNDRTCEGVRHKKYP 151
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKY 93
V S+QYH EASPGP D + +F F+E MK K+
Sbjct: 152 VFSVQYHPEASPGPHDPNYLFDIFIENMKKSKF 184
>gi|124266454|ref|YP_001020458.1| carbamoyl-phosphate synthase small subunit [Methylibium
petroleiphilum PM1]
gi|124259229|gb|ABM94223.1| carbamoyl-phosphate synthase small subunit [Methylibium
petroleiphilum PM1]
Length = 383
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 57/89 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ +GRV I++QNH +AVD +LP + TH++L DGT GLA
Sbjct: 293 KFGHHGANHPVKDLDDGRVSITSQNHGFAVDEKSLPATLRPTHVSLFDGTLQGLARTDKP 352
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
Q H EASPGP D +F F+ LM+
Sbjct: 353 AFCFQGHPEASPGPHDIGYLFDRFIALME 381
>gi|71276057|ref|ZP_00652338.1| Carbamoyl-phosphate synthase, small subunit [Xylella fastidiosa
Dixon]
gi|170729659|ref|YP_001775092.1| carbamoyl phosphate synthase small subunit [Xylella fastidiosa M12]
gi|71163140|gb|EAO12861.1| Carbamoyl-phosphate synthase, small subunit [Xylella fastidiosa
Dixon]
gi|71730792|gb|EAO32865.1| Carbamoyl-phosphate synthase, small subunit [Xylella fastidiosa
subsp. sandyi Ann-1]
gi|167964452|gb|ACA11462.1| carbamoyl-phosphate synthase small chain [Xylella fastidiosa M12]
Length = 399
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 59/88 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++++GRV I++QNH +AVD ATLP V VTH +L DGT G+ +
Sbjct: 310 GHHGANHPVQDLRSGRVMITSQNHGFAVDEATLPNNVRVTHRSLFDGTNQGIELLDVPAF 369
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D D +F F+ +M +
Sbjct: 370 SFQGHPEASPGPHDVDVLFDRFITMMAA 397
>gi|332526110|ref|ZP_08402248.1| carbamoyl-phosphate synthase small subunit [Rubrivivax
benzoatilyticus JA2]
gi|332109953|gb|EGJ10581.1| carbamoyl-phosphate synthase small subunit [Rubrivivax
benzoatilyticus JA2]
Length = 384
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 46/89 (51%), Positives = 57/89 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV ++ +GRV I++QNH +AVD TL + TH++L DGT GLA
Sbjct: 293 KFGHHGGNHPVKDLDSGRVSITSQNHGFAVDEKTLGANLRPTHVSLFDGTLQGLARTDRP 352
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
Q H EASPGP D +F FV LM+
Sbjct: 353 AFCFQGHPEASPGPHDIGYLFDRFVALMQ 381
>gi|157147551|ref|YP_001454870.1| carbamoyl phosphate synthase small subunit [Citrobacter koseri ATCC
BAA-895]
gi|157084756|gb|ABV14434.1| hypothetical protein CKO_03351 [Citrobacter koseri ATCC BAA-895]
Length = 391
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD A++P + VTH +L DGT G+
Sbjct: 296 KFGHHGGNHPVKDIDNNTVMITAQNHGFAVDEASMPANLRVTHKSLFDGTLQGIHRTDKP 355
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 356 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRQSA 390
>gi|365104001|ref|ZP_09333662.1| carbamoyl-phosphate synthase small chain [Citrobacter freundii
4_7_47CFAA]
gi|363644614|gb|EHL83895.1| carbamoyl-phosphate synthase small chain [Citrobacter freundii
4_7_47CFAA]
Length = 382
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD A++P + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDIDNNTVMITAQNHGFAVDEASMPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRQSA 381
>gi|336427925|ref|ZP_08607916.1| carbamoyl-phosphate synthase, small subunit [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
gi|336008674|gb|EGN38687.1| carbamoyl-phosphate synthase, small subunit [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
Length = 400
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
K+GH GGNHPV ++ GRV IS+QNH Y VD L PK +N+NDGT GL Y
Sbjct: 305 KYGHRGGNHPVKDLTTGRVYISSQNHGYVVDMDKLDPKVAAPAFVNVNDGTNEGLEYTGK 364
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
N+ ++Q+H EA PGP DS +F F+ +M
Sbjct: 365 NIFTVQFHPEACPGPQDSGFLFDRFITMM 393
>gi|395788389|ref|ZP_10467953.1| carbamoyl-phosphate synthase small chain [Bartonella birtlesii
LL-WM9]
gi|395408306|gb|EJF74917.1| carbamoyl-phosphate synthase small chain [Bartonella birtlesii
LL-WM9]
Length = 398
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 44/90 (48%), Positives = 59/90 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI + NH +AVD +LP V+ THI+L DG+ G+ +
Sbjct: 306 GHHGANHPVKDLNTGKVEIVSMNHGFAVDAKSLPPHVQETHISLFDGSNCGIRIIGKPIF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +FR F +L+ K
Sbjct: 366 SVQYHPEASPGPQDSYYLFRHFCDLIMDYK 395
>gi|417790461|ref|ZP_12438012.1| carbamoyl phosphate synthase small subunit [Cronobacter sakazakii
E899]
gi|424797906|ref|ZP_18223448.1| Carbamoyl-phosphate synthase small chain [Cronobacter sakazakii
696]
gi|449309560|ref|YP_007441916.1| carbamoyl phosphate synthase small subunit [Cronobacter sakazakii
SP291]
gi|333955411|gb|EGL73162.1| carbamoyl phosphate synthase small subunit [Cronobacter sakazakii
E899]
gi|423233627|emb|CCK05318.1| Carbamoyl-phosphate synthase small chain [Cronobacter sakazakii
696]
gi|449099593|gb|AGE87627.1| carbamoyl phosphate synthase small subunit [Cronobacter sakazakii
SP291]
Length = 382
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N RV I+AQNH +AVD A++P + VTH +L D T G+
Sbjct: 287 KFGHHGGNHPVKDIDNNRVMITAQNHGFAVDEASMPSTLRVTHKSLFDNTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|336122533|ref|YP_004577308.1| carbamoyl-phosphate synthase, small subunit [Methanothermococcus
okinawensis IH1]
gi|334857054|gb|AEH07530.1| carbamoyl-phosphate synthase, small subunit [Methanothermococcus
okinawensis IH1]
Length = 355
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 41/87 (47%), Positives = 57/87 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGN PV N+ N +V I++QNH YA ++PK E+ +INLND T GL N
Sbjct: 265 KFGHRGGNQPVKNLDNDKVYITSQNHGYATKRESMPKDAEIFNINLNDNTVEGLKIKDKN 324
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVEL 87
++ +QYH EA PGP D+ +F + ++L
Sbjct: 325 ILCVQYHPEAGPGPHDARFLFDEMIKL 351
>gi|99082134|ref|YP_614288.1| carbamoyl phosphate synthase small subunit [Ruegeria sp. TM1040]
gi|99038414|gb|ABF65026.1| carbamoyl-phosphate synthase small subunit [Ruegeria sp. TM1040]
Length = 386
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 59/90 (65%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV G+VEI++ NH +AVD TLP+GVE TH++L DG+ G+ V
Sbjct: 296 GHHGANHPVKEHGTGKVEITSMNHGFAVDAQTLPEGVEETHVSLFDGSNCGIRMTDRPVY 355
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +F F E M + K
Sbjct: 356 SVQHHPEASPGPQDSFYLFERFAEAMAARK 385
>gi|150391901|ref|YP_001321950.1| carbamoyl phosphate synthase small subunit [Alkaliphilus
metalliredigens QYMF]
gi|149951763|gb|ABR50291.1| carbamoyl-phosphate synthase, small subunit [Alkaliphilus
metalliredigens QYMF]
Length = 361
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 59/88 (67%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G NHPV ++ N +V I++QNH Y V LPK + VTHINLND T G+ + L
Sbjct: 263 KFGHRGCNHPVKDLINSKVYITSQNHGYVVKNEDLPKEMVVTHINLNDETIEGMQHKTLP 322
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
+ S+Q+H EA PGP D+ +F F++++
Sbjct: 323 IFSVQFHPEACPGPQDTGYLFDRFMKML 350
>gi|443312141|ref|ZP_21041761.1| carbamoyl-phosphate synthase, small subunit [Synechocystis sp. PCC
7509]
gi|442777819|gb|ELR88092.1| carbamoyl-phosphate synthase, small subunit [Synechocystis sp. PCC
7509]
Length = 377
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 47/93 (50%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G N P Q +VEI++QNH++A+DP +L VE+TH+NLND T AGL + L
Sbjct: 285 KFGHRGLNQPAGLEQ--KVEITSQNHSFALDPDSLLNADVEITHLNLNDRTVAGLKHKTL 342
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
+ S+QYH EASPGP D+D +F FV M++ +
Sbjct: 343 PMFSVQYHPEASPGPHDADYLFEQFVTSMRTSR 375
>gi|395229211|ref|ZP_10407527.1| carbamoyl-phosphate synthase small chain [Citrobacter sp. A1]
gi|421844660|ref|ZP_16277817.1| carbamoyl phosphate synthase small subunit [Citrobacter freundii
ATCC 8090 = MTCC 1658]
gi|424729310|ref|ZP_18157912.1| carbamoyl-phosphate synthase small chain [Citrobacter sp. L17]
gi|394717264|gb|EJF22962.1| carbamoyl-phosphate synthase small chain [Citrobacter sp. A1]
gi|411774139|gb|EKS57649.1| carbamoyl phosphate synthase small subunit [Citrobacter freundii
ATCC 8090 = MTCC 1658]
gi|422896034|gb|EKU35820.1| carbamoyl-phosphate synthase small chain [Citrobacter sp. L17]
gi|455643634|gb|EMF22758.1| carbamoyl phosphate synthase small subunit [Citrobacter freundii
GTC 09479]
Length = 382
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD A++P + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDIDNNTVMITAQNHGFAVDEASMPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRQSA 381
>gi|254787221|ref|YP_003074650.1| carbamoyl-phosphate synthase, small subunit [Teredinibacter
turnerae T7901]
gi|259585676|sp|C5BQ30.1|CARA_TERTT RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|237685938|gb|ACR13202.1| carbamoyl-phosphate synthase, small subunit [Teredinibacter
turnerae T7901]
Length = 386
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 59/89 (66%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV N++ G V I++QNH +A D +TLP +E TH +L DG+ G+
Sbjct: 291 KFGHHGGNHPVQNVKTGEVMITSQNHGFAADESTLPDCLEATHKSLFDGSLQGIHRTDKP 350
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
S Q H EASPGP D+ +F F+ELM+
Sbjct: 351 AFSFQGHPEASPGPHDAAELFDHFIELMQ 379
>gi|423441381|ref|ZP_17418287.1| carbamoyl-phosphate synthase small chain [Bacillus cereus BAG4X2-1]
gi|423533797|ref|ZP_17510215.1| carbamoyl-phosphate synthase small chain [Bacillus cereus HuB2-9]
gi|402418042|gb|EJV50342.1| carbamoyl-phosphate synthase small chain [Bacillus cereus BAG4X2-1]
gi|402464016|gb|EJV95716.1| carbamoyl-phosphate synthase small chain [Bacillus cereus HuB2-9]
Length = 365
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ G+V I++QNH YAV+ ++ +E+TH+ LNDGT GL +
Sbjct: 263 KFGHRGLNHPVKNLATGKVAITSQNHGYAVEEESVENTNLEITHVALNDGTVEGLRHTKF 322
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
++QYH EAS GP+D++ +F DF+E++++ K
Sbjct: 323 PAFTVQYHPEASAGPEDANDLFEDFLEMIENFK 355
>gi|423448393|ref|ZP_17425272.1| carbamoyl-phosphate synthase small chain [Bacillus cereus BAG5O-1]
gi|401128987|gb|EJQ36670.1| carbamoyl-phosphate synthase small chain [Bacillus cereus BAG5O-1]
Length = 365
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ G+V I++QNH YAV+ ++ +E+TH+ LNDGT GL +
Sbjct: 263 KFGHRGLNHPVKNLATGKVAITSQNHGYAVEEESVENTNLEITHVALNDGTVEGLRHTKF 322
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
++QYH EAS GP+D++ +F DF+E++++ K
Sbjct: 323 PAFTVQYHPEASAGPEDANDLFEDFLEMIENFK 355
>gi|407706346|ref|YP_006829931.1| phosphoglycerate mutase [Bacillus thuringiensis MC28]
gi|407384031|gb|AFU14532.1| carbamoyl phosphate synthase small subunit [Bacillus thuringiensis
MC28]
Length = 365
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ G+V I++QNH YAV+ ++ +E+TH+ LNDGT GL +
Sbjct: 263 KFGHRGLNHPVKNLATGKVAITSQNHGYAVEEESVENTNLEITHVALNDGTVEGLRHTKF 322
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
++QYH EAS GP+D++ +F DF+E++++ K
Sbjct: 323 PAFTVQYHPEASAGPEDANDLFEDFLEMIENFK 355
>gi|317496860|ref|ZP_07955190.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 5_1_63FAA]
gi|429763545|ref|ZP_19295893.1| carbamoyl-phosphate synthase, small subunit [Anaerostipes hadrus
DSM 3319]
gi|316895872|gb|EFV18024.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 5_1_63FAA]
gi|429178327|gb|EKY19607.1| carbamoyl-phosphate synthase, small subunit [Anaerostipes hadrus
DSM 3319]
Length = 359
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 43/93 (46%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
++GH GGNHPV ++++GRV IS+QNH Y + T+ P EV+ IN+ND T GL Y
Sbjct: 265 RWGHRGGNHPVKDLKSGRVYISSQNHGYVIKEETIDPDVAEVSFINVNDKTIEGLDYKNK 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
N+ ++Q+H EA PGP D+ +F +F++ MK K
Sbjct: 325 NIRTVQFHPEACPGPQDTAYLFDEFMDRMKGAK 357
>gi|422419452|ref|ZP_16496407.1| carbamoyl-phosphate synthase, small subunit [Listeria seeligeri FSL
N1-067]
gi|422422543|ref|ZP_16499496.1| carbamoyl-phosphate synthase, small subunit [Listeria seeligeri FSL
S4-171]
gi|313632745|gb|EFR99714.1| carbamoyl-phosphate synthase, small subunit [Listeria seeligeri FSL
N1-067]
gi|313637315|gb|EFS02806.1| carbamoyl-phosphate synthase, small subunit [Listeria seeligeri FSL
S4-171]
Length = 363
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV + GRV+ +AQNH YAVD +L ++VTHI LND T GLA+
Sbjct: 265 KFGHRGANHPVKELATGRVDFTAQNHGYAVDKDSLVDTDLKVTHIELNDETVEGLAHKEY 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
++QYH EA+PGP D + +F +F+E+M
Sbjct: 325 QAYTVQYHPEANPGPSDVNYLFDEFMEMM 353
>gi|404405321|ref|ZP_10996905.1| carbamoyl-phosphate synthase small subunit [Alistipes sp. JC136]
Length = 363
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ G++EI++QNH+YAVD +L G+ +TH+NL DGT G+ A
Sbjct: 269 KFGHRGANHPVKNLVTGKLEITSQNHSYAVDVDSLEGTGLTLTHVNLLDGTAEGVECAAD 328
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S+QYH E++ GP DS +F+ F ++M+
Sbjct: 329 GVFSMQYHPESASGPQDSAYLFKKFTKIME 358
>gi|420369397|ref|ZP_14870115.1| carbamoyl-phosphate synthase small chain [Shigella flexneri
1235-66]
gi|391321350|gb|EIQ78080.1| carbamoyl-phosphate synthase small chain [Shigella flexneri
1235-66]
Length = 382
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD A++P + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDIDNNTVMITAQNHGFAVDEASMPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRQSA 381
>gi|386810879|ref|ZP_10098105.1| carbamoyl-phosphate synthase small subunit [planctomycete KSU-1]
gi|386405603|dbj|GAB60986.1| carbamoyl-phosphate synthase small subunit [planctomycete KSU-1]
Length = 375
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 7/96 (7%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL------PKG-VEVTHINLNDGTCAG 53
KFGHHGGN PV ++ +VEI+AQNHN+AV + P G VE+TH+NLND + G
Sbjct: 277 KFGHHGGNQPVIDLATKKVEITAQNHNFAVTSPSQGTRQKSPYGDVEITHLNLNDKSVEG 336
Query: 54 LAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
L ++ S+QYH EASPGP D+ +F F+E+MK
Sbjct: 337 LRCHSIPAFSVQYHPEASPGPHDATYLFEQFIEMMK 372
>gi|170079100|ref|YP_001735738.1| carbamoyl phosphate synthase small subunit [Synechococcus sp. PCC
7002]
gi|169886769|gb|ACB00483.1| carbamoyl-phosphate synthase, small subunit [Synechococcus sp. PCC
7002]
Length = 380
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 45/92 (48%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P ++ ++EI++QNH +A+ A+L + V +TH+NLND T AGL + L
Sbjct: 288 KFGHRGLNQPA-GLKQKQIEITSQNHGFAIAEASLAEDVAITHLNLNDRTVAGLEHKTLP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+D +F FV MK+ K
Sbjct: 347 FFSVQYHPEASPGPHDADYLFEKFVRSMKAHK 378
>gi|156935439|ref|YP_001439355.1| carbamoyl phosphate synthase small subunit [Cronobacter sakazakii
ATCC BAA-894]
gi|156533693|gb|ABU78519.1| hypothetical protein ESA_03298 [Cronobacter sakazakii ATCC BAA-894]
Length = 391
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N RV I+AQNH +AVD A++P + VTH +L D T G+
Sbjct: 296 KFGHHGGNHPVKDIDNNRVMITAQNHGFAVDEASMPSTLRVTHKSLFDNTLQGIHRTDKP 355
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 356 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 390
>gi|147920258|ref|YP_685975.1| carbamoyl phosphate synthase small subunit [Methanocella arvoryzae
MRE50]
gi|110621371|emb|CAJ36649.1| carbamoyl-phosphate synthase, small subunit [Methanocella arvoryzae
MRE50]
Length = 357
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G N PV +++ G+V I++QNH YAVDPA++ + +++TH+N NDGT G+ AL
Sbjct: 264 KFGHRGANQPVIDLETGKVYITSQNHGYAVDPASIDGRDIKITHVNANDGTVEGMKNDAL 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVE 86
V S+QYH EA+PGP D++ F ++
Sbjct: 324 KVWSVQYHPEANPGPQDTNWFFDSMLQ 350
>gi|401762222|ref|YP_006577229.1| carbamoyl-phosphate synthase small subunit [Enterobacter cloacae
subsp. cloacae ENHKU01]
gi|400173756|gb|AFP68605.1| carbamoyl-phosphate synthase small subunit [Enterobacter cloacae
subsp. cloacae ENHKU01]
Length = 382
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD A++P + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDIDNNTVMITAQNHGFAVDEASMPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|6730117|pdb|1C30|B Chain B, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
gi|6730119|pdb|1C30|D Chain D, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
gi|6730121|pdb|1C30|F Chain F, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
gi|6730123|pdb|1C30|H Chain H, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
gi|6730127|pdb|1C3O|B Chain B, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
gi|6730129|pdb|1C3O|D Chain D, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
gi|6730131|pdb|1C3O|F Chain F, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
gi|6730133|pdb|1C3O|H Chain H, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
Length = 382
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|87121707|ref|ZP_01077594.1| carbamoyl-phosphate synthase small subunit [Marinomonas sp. MED121]
gi|86162958|gb|EAQ64236.1| carbamoyl-phosphate synthase small subunit [Marinomonas sp. MED121]
Length = 380
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 44/92 (47%), Positives = 59/92 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV +I+ G V I++QNH +AVD +LP +E TH +L DG+ G+A
Sbjct: 288 KFGHHGANHPVQDIKAGTVMITSQNHGFAVDEDSLPSNLEATHKSLFDGSLQGIARTDKR 347
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D +F F++ +K+ K
Sbjct: 348 AFSFQGHPEASPGPHDVAPLFDQFIDSIKASK 379
>gi|15645851|ref|NP_208029.1| carbamoyl phosphate synthase small subunit [Helicobacter pylori
26695]
gi|410024468|ref|YP_006893721.1| carbamoyl phosphate synthase small subunit [Helicobacter pylori
Rif1]
gi|410502235|ref|YP_006936762.1| carbamoyl phosphate synthase small subunit [Helicobacter pylori
Rif2]
gi|410682753|ref|YP_006935155.1| carbamoyl phosphate synthase small subunit [Helicobacter pylori
26695]
gi|419415877|ref|ZP_13956487.1| carbamoyl phosphate synthase small subunit [Helicobacter pylori
P79]
gi|21759011|sp|O25835.1|CARA_HELPY RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|2314401|gb|AAD08282.1| carbamoyl-phosphate synthetase (pyrAa) [Helicobacter pylori 26695]
gi|384375917|gb|EIE31159.1| carbamoyl phosphate synthase small subunit [Helicobacter pylori
P79]
gi|409894394|gb|AFV42452.1| carbamoyl phosphate synthase small subunit [Helicobacter pylori
26695]
gi|409896125|gb|AFV44047.1| carbamoyl phosphate synthase small subunit [Helicobacter pylori
Rif1]
gi|409897786|gb|AFV45640.1| carbamoyl phosphate synthase small subunit [Helicobacter pylori
Rif2]
Length = 375
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLKTNAVEITAQNHNYCV-PEDIEEIAIITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|420504814|ref|ZP_15003338.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
P-62]
gi|393153960|gb|EJC54245.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
P-62]
Length = 375
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLKTNAVEITAQNHNYCV-PEDIEEIAIITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|381183277|ref|ZP_09892026.1| carbamoyl phosphate synthase small subunit [Listeriaceae bacterium
TTU M1-001]
gi|380316833|gb|EIA20203.1| carbamoyl phosphate synthase small subunit [Listeriaceae bacterium
TTU M1-001]
Length = 330
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDP-ATLPKGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV ++ GRV+ +AQNH Y+VD + L + VTH+ LNDGT GLA+
Sbjct: 231 KFGHRGANHPVKELRTGRVDFTAQNHGYSVDADSILKTDLVVTHVELNDGTIEGLAHSEY 290
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
++QYH EA+PGP D + +F F+E+M
Sbjct: 291 PAFTVQYHPEANPGPSDVNYLFDQFMEMM 319
>gi|261403537|ref|YP_003247761.1| carbamoyl phosphate synthase small subunit [Methanocaldococcus
vulcanius M7]
gi|261370530|gb|ACX73279.1| carbamoyl-phosphate synthase, small subunit [Methanocaldococcus
vulcanius M7]
Length = 354
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 41/87 (47%), Positives = 60/87 (68%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH GGN PV +++ +V I++QNH +AVD TLP +EV+ INLND T G+ + L
Sbjct: 264 KFGHRGGNQPVKDLETEKVYITSQNHGFAVDENTLPNDLEVSFINLNDRTVEGIKHKNLP 323
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVEL 87
+ S+Q+H EA PGP D+ +F + ++L
Sbjct: 324 IFSVQFHPEARPGPHDTMFLFDEMIKL 350
>gi|423378260|ref|ZP_17355544.1| carbamoyl-phosphate synthase small chain [Bacillus cereus BAG1O-2]
gi|423547185|ref|ZP_17523543.1| carbamoyl-phosphate synthase small chain [Bacillus cereus HuB5-5]
gi|423615849|ref|ZP_17591683.1| carbamoyl-phosphate synthase small chain [Bacillus cereus VD115]
gi|423623033|ref|ZP_17598811.1| carbamoyl-phosphate synthase small chain [Bacillus cereus VD148]
gi|401178906|gb|EJQ86079.1| carbamoyl-phosphate synthase small chain [Bacillus cereus HuB5-5]
gi|401259806|gb|EJR65980.1| carbamoyl-phosphate synthase small chain [Bacillus cereus VD148]
gi|401260386|gb|EJR66559.1| carbamoyl-phosphate synthase small chain [Bacillus cereus VD115]
gi|401636526|gb|EJS54280.1| carbamoyl-phosphate synthase small chain [Bacillus cereus BAG1O-2]
Length = 373
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ G+V I++QNH YAV+ ++ +E+TH+ LNDGT GL +
Sbjct: 271 KFGHRGLNHPVKNLATGKVAITSQNHGYAVEEESVENTNLEITHVALNDGTVEGLRHTKF 330
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
++QYH EAS GP+D++ +F DF+E++++ K
Sbjct: 331 PAFTVQYHPEASAGPEDANDLFEDFLEMIENFK 363
>gi|421710699|ref|ZP_16150050.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori
R018c]
gi|421723930|ref|ZP_16163180.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori
R056a]
gi|407209346|gb|EKE79246.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori
R018c]
gi|407223867|gb|EKE93650.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori
R056a]
Length = 375
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLKTNAVEITAQNHNYCV-PEDIEEIAIITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|381180478|ref|ZP_09889318.1| carbamoyl-phosphate synthase small subunit [Treponema
saccharophilum DSM 2985]
gi|380767659|gb|EIC01658.1| carbamoyl-phosphate synthase small subunit [Treponema
saccharophilum DSM 2985]
Length = 438
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 57/88 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K+GH G N PV + GRV IS+QNH YAV+ +LP G ++ +N NDGTC G+ Y
Sbjct: 313 KYGHRGANQPVKYLATGRVYISSQNHGYAVENDSLPSGAVMSFVNTNDGTCEGIVYTDTP 372
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
S+Q+H EAS GP D+ +F +FV L+
Sbjct: 373 AFSVQFHPEASSGPLDTGFLFDEFVRLI 400
>gi|259503439|ref|ZP_05746341.1| carbamoyl-phosphate synthase [Lactobacillus antri DSM 16041]
gi|259168517|gb|EEW53012.1| carbamoyl-phosphate synthase [Lactobacillus antri DSM 16041]
Length = 363
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV NI G ++ ++QNH YAVDPA++ + + VTH+ +NDGT GL +
Sbjct: 265 KFGHRGFNHPVRNIATGEIDFTSQNHGYAVDPASVDSEKLLVTHVEVNDGTVEGLRHKQY 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
S+Q+H +A+PGP D+D +F DF+ ++
Sbjct: 325 PAFSVQFHPDAAPGPHDADSLFDDFISMV 353
>gi|208435131|ref|YP_002266797.1| carbamoyl phosphate synthase small subunit [Helicobacter pylori
G27]
gi|208433060|gb|ACI27931.1| carbamoyl-phosphate synthetase [Helicobacter pylori G27]
Length = 375
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLKTNAVEITAQNHNYCV-PEDIEEIAIITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL+K
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLK 373
>gi|6730188|pdb|1CS0|B Chain B, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
gi|6730190|pdb|1CS0|D Chain D, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
gi|6730192|pdb|1CS0|F Chain F, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
gi|6730194|pdb|1CS0|H Chain H, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
gi|18158904|pdb|1KEE|B Chain B, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
gi|18158906|pdb|1KEE|D Chain D, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
gi|18158908|pdb|1KEE|F Chain F, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
gi|18158910|pdb|1KEE|H Chain H, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
Length = 382
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|295688395|ref|YP_003592088.1| carbamoyl-phosphate synthase small subunit [Caulobacter segnis ATCC
21756]
gi|295430298|gb|ADG09470.1| carbamoyl-phosphate synthase, small subunit [Caulobacter segnis
ATCC 21756]
Length = 394
Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 58/90 (64%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI + NH + VD A+LP V+ TH++L DGT AG+ V
Sbjct: 305 GHHGANHPVKDLTTGKVEIVSMNHGFTVDSASLPAPVQETHVSLFDGTNAGIQLADKPVF 364
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+Q+H EASPGP DS +F F LM K
Sbjct: 365 SVQHHPEASPGPTDSLYLFERFAGLMDKAK 394
>gi|241889383|ref|ZP_04776684.1| carbamoyl-phosphate synthase, small subunit [Gemella haemolysans
ATCC 10379]
gi|241863926|gb|EER68307.1| carbamoyl-phosphate synthase, small subunit [Gemella haemolysans
ATCC 10379]
Length = 362
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ G+V+I++QNH ++VD +L +E+TH+++ND TC G+ +
Sbjct: 267 KFGHRGANHPVKNLITGKVDITSQNHGFSVDIESLKDTDLELTHLSVNDKTCEGVRHKKY 326
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
V S+QYH EASPGP D + +F F++ M+ K
Sbjct: 327 PVFSVQYHPEASPGPHDPNYLFDQFIDYMREFK 359
>gi|182680954|ref|YP_001829114.1| carbamoyl phosphate synthase small subunit [Xylella fastidiosa M23]
gi|182631064|gb|ACB91840.1| carbamoyl-phosphate synthase, small subunit [Xylella fastidiosa
M23]
Length = 399
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 59/88 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++++GRV I++QNH +AVD ATLP V VTH +L DGT G+ +
Sbjct: 310 GHHGANHPVQDLRSGRVMITSQNHGFAVDEATLPNNVRVTHRSLFDGTNQGIELLDVPAF 369
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKS 90
S Q H EASPGP D D +F F+ +M +
Sbjct: 370 SFQGHPEASPGPHDVDVLFDRFITMMAA 397
>gi|55669822|pdb|1T36|B Chain B, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
gi|55669824|pdb|1T36|D Chain D, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
gi|55669826|pdb|1T36|F Chain F, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
gi|55669828|pdb|1T36|H Chain H, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
Length = 382
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|423464455|ref|ZP_17441223.1| carbamoyl-phosphate synthase small chain [Bacillus cereus BAG6O-1]
gi|423540947|ref|ZP_17517338.1| carbamoyl-phosphate synthase small chain [Bacillus cereus HuB4-10]
gi|401172135|gb|EJQ79356.1| carbamoyl-phosphate synthase small chain [Bacillus cereus HuB4-10]
gi|402420722|gb|EJV52993.1| carbamoyl-phosphate synthase small chain [Bacillus cereus BAG6O-1]
Length = 373
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ G+V I++QNH YAV+ ++ +E+TH+ LNDGT GL +
Sbjct: 271 KFGHRGLNHPVKNLATGKVAITSQNHGYAVEEESVENTNLEITHVALNDGTVEGLRHTKF 330
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
++QYH EAS GP+D++ +F DF+E++++ K
Sbjct: 331 PAFTVQYHPEASAGPEDANDLFEDFLEMIENFK 363
>gi|401677486|ref|ZP_10809461.1| carbamoyl phosphate synthase small subunit [Enterobacter sp. SST3]
gi|400215334|gb|EJO46245.1| carbamoyl phosphate synthase small subunit [Enterobacter sp. SST3]
Length = 382
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD A++P + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDIDNNTVMITAQNHGFAVDEASMPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|420267355|ref|ZP_14769766.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA22]
gi|390721744|gb|EIN94438.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA22]
Length = 382
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|384921443|ref|ZP_10021419.1| carbamoyl phosphate synthase small subunit [Citreicella sp. 357]
gi|384464535|gb|EIE49104.1| carbamoyl phosphate synthase small subunit [Citreicella sp. 357]
Length = 379
Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 44/86 (51%), Positives = 58/86 (67%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV I+ G+VEI++ NH +AVD +LP GV TH++L DG+ G+ V
Sbjct: 294 GHHGANHPVKEIETGKVEITSMNHGFAVDGQSLPTGVTETHVSLFDGSNCGIRMVDRPVF 353
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELM 88
S+Q+H EASPGP DS +F FV +M
Sbjct: 354 SVQHHPEASPGPQDSFYLFERFVNIM 379
>gi|413958466|ref|ZP_11397705.1| carbamoyl phosphate synthase small subunit [Burkholderia sp. SJ98]
gi|413941046|gb|EKS73006.1| carbamoyl phosphate synthase small subunit [Burkholderia sp. SJ98]
Length = 380
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
K GHHG NHPV ++ +GRV I++QNH +AVD +TLP +VTH++L DGT G A
Sbjct: 286 KTGHHGANHPVKDMDDGRVVITSQNHGFAVDASTLPANAKVTHVSLFDGTLQGFALTDKP 345
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
Q H EASPGP D +F F++LM++ K A
Sbjct: 346 AFCFQGHPEASPGPHDIAYLFDRFIKLMEAQKVAA 380
>gi|378709841|ref|YP_005274735.1| carbamoyl-phosphate synthase small subunit [Shewanella baltica
OS678]
gi|315268830|gb|ADT95683.1| carbamoyl-phosphate synthase, small subunit [Shewanella baltica
OS678]
Length = 382
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 62/95 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV NI+ G V I++QNH +A D +TLP ++VTH +L DG+ G+
Sbjct: 287 KFGHHGANHPVSNIEKGNVMITSQNHGFAADESTLPANIKVTHKSLFDGSLQGIHLTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP+D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPNDAAPLFDHFIELIEQYRQNA 381
>gi|452944140|ref|YP_007500305.1| carbamoyl-phosphate synthase, small subunit [Hydrogenobaculum sp.
HO]
gi|452882558|gb|AGG15262.1| carbamoyl-phosphate synthase, small subunit [Hydrogenobaculum sp.
HO]
Length = 353
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV +++N RV I++QNHNYAV+ LP +EVTHINL D T G+ + +
Sbjct: 268 KFGHHGANHPVKDMRNNRVMITSQNHNYAVE--DLPDFMEVTHINLLDNTIEGMIHKNIP 325
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVEL 87
S+Q+H EASPGP D+ +F++F ++
Sbjct: 326 YYSVQFHPEASPGPHDALYIFKEFKDM 352
>gi|429120677|ref|ZP_19181345.1| Carbamoyl-phosphate synthase small chain [Cronobacter sakazakii
680]
gi|426324820|emb|CCK12082.1| Carbamoyl-phosphate synthase small chain [Cronobacter sakazakii
680]
Length = 347
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N RV I+AQNH +AVD A++P + VTH +L D T G+
Sbjct: 252 KFGHHGGNHPVKDIDNNRVMITAQNHGFAVDEASMPSTLRVTHKSLFDNTLQGIHRTDKP 311
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 312 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 346
>gi|429113943|ref|ZP_19174861.1| Carbamoyl-phosphate synthase small chain [Cronobacter sakazakii
701]
gi|426317072|emb|CCK00974.1| Carbamoyl-phosphate synthase small chain [Cronobacter sakazakii
701]
Length = 347
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N RV I+AQNH +AVD A++P + VTH +L D T G+
Sbjct: 252 KFGHHGGNHPVKDIDNNRVMITAQNHGFAVDEASMPSTLRVTHKSLFDNTLQGIHRTDKP 311
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 312 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 346
>gi|210610313|ref|ZP_03288342.1| hypothetical protein CLONEX_00532 [Clostridium nexile DSM 1787]
gi|210152543|gb|EEA83549.1| hypothetical protein CLONEX_00532 [Clostridium nexile DSM 1787]
Length = 370
Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDP-ATLPKGVEVTHINLNDGTCAGLAYPAL 59
KFGH GGNHPV N++ ++EI++QNH+YAVD + L + VTHINL D T G+
Sbjct: 270 KFGHRGGNHPVKNLKTNKIEITSQNHSYAVDADSLLETPLSVTHINLLDQTVEGVVCERD 329
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMK 89
V S+QYH E++PGP DS +F F+ L+K
Sbjct: 330 RVFSVQYHPESAPGPQDSTYLFDQFITLIK 359
>gi|419956700|ref|ZP_14472767.1| carbamoyl phosphate synthase small subunit [Enterobacter cloacae
subsp. cloacae GS1]
gi|388608457|gb|EIM37660.1| carbamoyl phosphate synthase small subunit [Enterobacter cloacae
subsp. cloacae GS1]
Length = 382
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD A++P + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDIDNNTVMITAQNHGFAVDEASMPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|420477938|ref|ZP_14976593.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
H-23]
gi|393092617|gb|EJB93238.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
H-23]
Length = 375
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEEIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL++
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLE 373
>gi|373119983|ref|ZP_09534059.1| carbamoyl-phosphate synthase, small subunit [Lachnospiraceae
bacterium 7_1_58FAA]
gi|371660169|gb|EHO25423.1| carbamoyl-phosphate synthase, small subunit [Lachnospiraceae
bacterium 7_1_58FAA]
Length = 366
Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 43/96 (44%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
+FGH GGNHPV ++++GR I++QNH Y V ++ P EV+HIN+N+G+ GL Y
Sbjct: 271 RFGHRGGNHPVKDLEHGRAYITSQNHGYVVTAESVDPAVAEVSHINVNEGSVEGLRYRRP 330
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
N ++Q+H EA+PGP D++ +F FV+ MK + A
Sbjct: 331 NCFTVQFHPEAAPGPMDTEYLFDRFVDSMKGGRAHA 366
>gi|365843131|ref|ZP_09384086.1| carbamoyl-phosphate synthase, small subunit [Flavonifractor plautii
ATCC 29863]
gi|364573297|gb|EHM50801.1| carbamoyl-phosphate synthase, small subunit [Flavonifractor plautii
ATCC 29863]
Length = 366
Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 43/96 (44%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
+FGH GGNHPV ++++GR I++QNH Y V ++ P EV+HIN+N+G+ GL Y
Sbjct: 271 RFGHRGGNHPVKDLEHGRAYITSQNHGYVVTAESVDPAVAEVSHINVNEGSVEGLRYRRP 330
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
N ++Q+H EA+PGP D++ +F FV+ MK + A
Sbjct: 331 NCFTVQFHPEAAPGPMDTEYLFDRFVDSMKGGRAHA 366
>gi|373950638|ref|ZP_09610599.1| carbamoyl-phosphate synthase, small subunit [Shewanella baltica
OS183]
gi|386323525|ref|YP_006019642.1| carbamoyl-phosphate synthase small subunit [Shewanella baltica
BA175]
gi|333817670|gb|AEG10336.1| carbamoyl-phosphate synthase, small subunit [Shewanella baltica
BA175]
gi|373887238|gb|EHQ16130.1| carbamoyl-phosphate synthase, small subunit [Shewanella baltica
OS183]
Length = 382
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 62/95 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV NI+ G V I++QNH +A D +TLP ++VTH +L DG+ G+
Sbjct: 287 KFGHHGANHPVSNIEKGNVMITSQNHGFAADESTLPANIKVTHKSLFDGSLQGIHLTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP+D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPNDAAPLFDHFIELIEQYRQNA 381
>gi|431929752|ref|YP_007242798.1| carbamoyl-phosphate synthase small subunit [Thioflavicoccus mobilis
8321]
gi|431828055|gb|AGA89168.1| carbamoyl-phosphate synthase, small subunit [Thioflavicoccus
mobilis 8321]
Length = 380
Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 57/88 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV ++ G V IS+QNH +AVD A+LP+ + TH +L DGT G+ +
Sbjct: 288 KFGHHGANHPVQDLDTGAVMISSQNHGFAVDEASLPENLRATHRSLFDGTLQGIHHRERP 347
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
S Q H EASPGP D +F FVELM
Sbjct: 348 AFSFQGHPEASPGPRDVSPLFDHFVELM 375
>gi|420424134|ref|ZP_14923202.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
A-4]
gi|393039422|gb|EJB40449.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
A-4]
Length = 375
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEAIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL++
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLE 373
>gi|91792355|ref|YP_562006.1| carbamoyl phosphate synthase small subunit [Shewanella
denitrificans OS217]
gi|91714357|gb|ABE54283.1| carbamoyl-phosphate synthase small subunit [Shewanella
denitrificans OS217]
Length = 381
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ G V I++QNH +A D ATLP ++VTH +L DG+ G+
Sbjct: 286 KFGHHGANHPVSNVEKGTVMITSQNHGFAADEATLPANIKVTHKSLFDGSLQGIHLTDKP 345
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYR 94
S Q H EASPGP+D+ +F F+EL++ +YR
Sbjct: 346 AFSFQGHPEASPGPNDAAPLFDHFIELIE--QYR 377
>gi|425420629|ref|ZP_18801873.1| carbamoylphosphate synthetase small subunit [Escherichia coli
0.1288]
gi|408348429|gb|EKJ62525.1| carbamoylphosphate synthetase small subunit [Escherichia coli
0.1288]
Length = 347
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 252 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 311
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 312 TFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 346
>gi|420452612|ref|ZP_14951455.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
A-6]
gi|393067174|gb|EJB67987.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
A-6]
Length = 375
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEAIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL++
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLE 373
>gi|354721690|ref|ZP_09035905.1| carbamoyl phosphate synthase small subunit [Enterobacter mori LMG
25706]
Length = 382
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD A++P + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDIDNNTVMITAQNHGFAVDEASMPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|395793158|ref|ZP_10472563.1| carbamoyl-phosphate synthase small chain [Bartonella vinsonii
subsp. arupensis Pm136co]
gi|423713695|ref|ZP_17687955.1| carbamoyl-phosphate synthase small chain [Bartonella vinsonii
subsp. arupensis OK-94-513]
gi|395422022|gb|EJF88243.1| carbamoyl-phosphate synthase small chain [Bartonella vinsonii
subsp. arupensis OK-94-513]
gi|395431472|gb|EJF97490.1| carbamoyl-phosphate synthase small chain [Bartonella vinsonii
subsp. arupensis Pm136co]
Length = 398
Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 44/90 (48%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV ++ G+VEI + NH +AVD +LP+ V+ THI+L DGT G+ +
Sbjct: 306 GHHGANHPVKDLNTGKVEIVSMNHGFAVDATSLPQHVQETHISLFDGTNCGIRIIGKPIF 365
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F+ F +L+ K
Sbjct: 366 SVQYHPEASPGPQDSHYLFQHFCDLIMDYK 395
>gi|296101205|ref|YP_003611351.1| carbamoyl-phosphate synthase small subunit [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295055664|gb|ADF60402.1| carbamoyl-phosphate synthase, small subunit [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 347
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD A++P + VTH +L DGT G+
Sbjct: 252 KFGHHGGNHPVKDIDNNTVMITAQNHGFAVDEASMPANLRVTHKSLFDGTLQGIHRTDKP 311
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 312 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 346
>gi|432858336|ref|ZP_20084832.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE146]
gi|431408579|gb|ELG91762.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE146]
Length = 382
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|311280979|ref|YP_003943210.1| carbamoyl-phosphate synthase small subunit [Enterobacter cloacae
SCF1]
gi|308750174|gb|ADO49926.1| carbamoyl-phosphate synthase, small subunit [Enterobacter cloacae
SCF1]
Length = 382
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD A++P + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDIDNNTVMITAQNHGFAVDEASMPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|291539131|emb|CBL12242.1| carbamoyl-phosphate synthase, small subunit [Roseburia intestinalis
XB6B4]
Length = 319
Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPAL 59
K+GH GGNHPV +++ GRV IS+QNH Y VD TL P + +N+NDGT GL+Y
Sbjct: 231 KYGHRGGNHPVKDLETGRVYISSQNHGYVVDTDTLDPVIAKPAFVNVNDGTNEGLSYVGK 290
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
N+ ++Q+H EA PGP DS +F F+ +M
Sbjct: 291 NIFTVQFHPEACPGPQDSAYLFDRFISMM 319
>gi|420378191|ref|ZP_14877696.1| carbamoyl-phosphate synthase small chain [Shigella dysenteriae
225-75]
gi|391307780|gb|EIQ65507.1| carbamoyl-phosphate synthase small chain [Shigella dysenteriae
225-75]
Length = 382
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|347549232|ref|YP_004855560.1| putative carbamoyl-phosphate synthetase glutaminase subunit
[Listeria ivanovii subsp. ivanovii PAM 55]
gi|346982303|emb|CBW86297.1| Putative carbamoyl-phosphate synthetase (glutaminase subunit)
[Listeria ivanovii subsp. ivanovii PAM 55]
Length = 363
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV + GRV+ +AQNH YAVD +L ++VTHI LND T GLA+
Sbjct: 265 KFGHRGANHPVKELATGRVDFTAQNHGYAVDKDSLVNTDLKVTHIELNDETVEGLAHKEY 324
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELM 88
++QYH EA+PGP D + +F +F+E+M
Sbjct: 325 QAYTVQYHPEANPGPSDVNYLFDEFMEMM 353
>gi|298378633|ref|ZP_06988517.1| carbamoyl-phosphate synthase small subunit [Escherichia coli
FVEC1302]
gi|300900948|ref|ZP_07119082.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
198-1]
gi|298280967|gb|EFI22468.1| carbamoyl-phosphate synthase small subunit [Escherichia coli
FVEC1302]
gi|300355575|gb|EFJ71445.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
198-1]
Length = 391
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 296 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 355
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 356 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 390
>gi|419919079|ref|ZP_14437247.1| carbamoyl phosphate synthase small subunit [Escherichia coli KD2]
gi|432546349|ref|ZP_19783161.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE236]
gi|432546754|ref|ZP_19783554.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE237]
gi|432624998|ref|ZP_19860997.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE76]
gi|432717044|ref|ZP_19952049.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE9]
gi|432768839|ref|ZP_20003219.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE50]
gi|432818253|ref|ZP_20051980.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE115]
gi|432856843|ref|ZP_20084094.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE144]
gi|432958761|ref|ZP_20149619.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE202]
gi|433061240|ref|ZP_20248214.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE125]
gi|388388742|gb|EIL50300.1| carbamoyl phosphate synthase small subunit [Escherichia coli KD2]
gi|431068131|gb|ELD76636.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE236]
gi|431086566|gb|ELD92588.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE237]
gi|431153064|gb|ELE53983.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE76]
gi|431267907|gb|ELF59422.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE9]
gi|431320232|gb|ELG07875.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE50]
gi|431359242|gb|ELG45887.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE115]
gi|431395351|gb|ELG78863.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE144]
gi|431483256|gb|ELH62948.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE202]
gi|431589519|gb|ELI60733.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE125]
Length = 382
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|218698452|ref|YP_002406081.1| carbamoyl phosphate synthase small subunit [Escherichia coli IAI39]
gi|386622446|ref|YP_006142174.1| carbamoyl phosphate synthase small subunit [Escherichia coli O7:K1
str. CE10]
gi|432600543|ref|ZP_19836799.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE66]
gi|432678440|ref|ZP_19913845.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE143]
gi|218368438|emb|CAR16174.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Escherichia coli IAI39]
gi|349736184|gb|AEQ10890.1| carbamoyl phosphate synthase small subunit [Escherichia coli O7:K1
str. CE10]
gi|431144582|gb|ELE46276.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE66]
gi|431225396|gb|ELF22596.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE143]
Length = 382
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|160876632|ref|YP_001555948.1| carbamoyl phosphate synthase small subunit [Shewanella baltica
OS195]
gi|160862154|gb|ABX50688.1| carbamoyl-phosphate synthase, small subunit [Shewanella baltica
OS195]
Length = 386
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 62/95 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV NI+ G V I++QNH +A D +TLP ++VTH +L DG+ G+
Sbjct: 291 KFGHHGANHPVSNIEKGNVMITSQNHGFAADESTLPANIKVTHKSLFDGSLQGIHLTDKP 350
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP+D+ +F F+EL++ + A
Sbjct: 351 AFSFQGHPEASPGPNDAAPLFDHFIELIEQYRQNA 385
>gi|15615100|ref|NP_243403.1| carbamoyl phosphate synthase small subunit [Bacillus halodurans
C-125]
gi|21759056|sp|Q9K9V8.1|CARA_BACHD RecName: Full=Carbamoyl-phosphate synthase pyrimidine-specific
small chain; AltName: Full=Carbamoyl-phosphate
synthetase glutamine chain
gi|10175157|dbj|BAB06256.1| carbamoyl-phosphate synthetase (glutaminase subunit) [Bacillus
halodurans C-125]
Length = 362
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
+FGH G NHPV G +EI+AQNH Y V +L + VTH +NDGT GLA+
Sbjct: 264 RFGHRGSNHPVRERSTGLIEITAQNHGYTVTEGSLVNTDLIVTHEAVNDGTIEGLAHKVH 323
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S+QYH EASPGP+DS+ +F F++LM+S K+RA
Sbjct: 324 PAFSVQYHPEASPGPEDSNVLFDRFIKLMESNKHRA 359
>gi|422971568|ref|ZP_16974843.1| carbamoyl-phosphate synthase small chain [Escherichia coli TA124]
gi|371598644|gb|EHN87441.1| carbamoyl-phosphate synthase small chain [Escherichia coli TA124]
Length = 382
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|331681415|ref|ZP_08382052.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli H299]
gi|450184906|ref|ZP_21888816.1| carbamoyl phosphate synthase small subunit [Escherichia coli
SEPT362]
gi|331081636|gb|EGI52797.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli H299]
gi|449325636|gb|EMD15539.1| carbamoyl phosphate synthase small subunit [Escherichia coli
SEPT362]
Length = 382
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|229098358|ref|ZP_04229304.1| Carbamoyl-phosphate synthase small chain [Bacillus cereus Rock3-29]
gi|228685063|gb|EEL38995.1| Carbamoyl-phosphate synthase small chain [Bacillus cereus Rock3-29]
Length = 332
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ G+V I++QNH YAV+ ++ +E+TH+ LNDGT GL +
Sbjct: 230 KFGHRGLNHPVKNLATGKVAITSQNHGYAVEEESVENTNLEITHVALNDGTVEGLRHTKF 289
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
++QYH EAS GP+D++ +F DF+E++++ K
Sbjct: 290 PAFTVQYHPEASAGPEDANDLFEDFLEMIENFK 322
>gi|209917223|ref|YP_002291307.1| carbamoyl phosphate synthase small subunit [Escherichia coli SE11]
gi|293408124|ref|ZP_06651964.1| carbamoyl-phosphate synthase [Escherichia coli B354]
gi|293417907|ref|ZP_06660529.1| carbamoyl-phosphate synthase [Escherichia coli B185]
gi|300816066|ref|ZP_07096289.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
107-1]
gi|300821964|ref|ZP_07102108.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
119-7]
gi|300905434|ref|ZP_07123201.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
84-1]
gi|300924020|ref|ZP_07140020.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
182-1]
gi|300928671|ref|ZP_07144190.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
187-1]
gi|301305078|ref|ZP_07211179.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
124-1]
gi|301330202|ref|ZP_07222862.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
78-1]
gi|309797798|ref|ZP_07692182.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
145-7]
gi|331680602|ref|ZP_08381261.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli H591]
gi|332281282|ref|ZP_08393695.1| carbamoyl-phosphate synthase subunit small [Shigella sp. D9]
gi|415863271|ref|ZP_11536562.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
85-1]
gi|415873132|ref|ZP_11540410.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
79-10]
gi|422354339|ref|ZP_16435081.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
117-3]
gi|422788272|ref|ZP_16841009.1| carbamoyl-phosphate synthase [Escherichia coli H489]
gi|422792683|ref|ZP_16845382.1| carbamoyl-phosphate synthase [Escherichia coli TA007]
gi|209910482|dbj|BAG75556.1| carbamoyl-phosphate synthase small subunit [Escherichia coli SE11]
gi|291430625|gb|EFF03623.1| carbamoyl-phosphate synthase [Escherichia coli B185]
gi|291472375|gb|EFF14857.1| carbamoyl-phosphate synthase [Escherichia coli B354]
gi|300402712|gb|EFJ86250.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
84-1]
gi|300419744|gb|EFK03055.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
182-1]
gi|300463340|gb|EFK26833.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
187-1]
gi|300525564|gb|EFK46633.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
119-7]
gi|300531273|gb|EFK52335.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
107-1]
gi|300839685|gb|EFK67445.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
124-1]
gi|300843764|gb|EFK71524.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
78-1]
gi|308118627|gb|EFO55889.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
145-7]
gi|315255694|gb|EFU35662.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
85-1]
gi|323959980|gb|EGB55626.1| carbamoyl-phosphate synthase [Escherichia coli H489]
gi|323970705|gb|EGB65959.1| carbamoyl-phosphate synthase [Escherichia coli TA007]
gi|324017701|gb|EGB86920.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
117-3]
gi|331072065|gb|EGI43401.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli H591]
gi|332103634|gb|EGJ06980.1| carbamoyl-phosphate synthase subunit small [Shigella sp. D9]
gi|342931169|gb|EGU99891.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
79-10]
Length = 391
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 296 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 355
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 356 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 390
>gi|420499356|ref|ZP_14997912.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
P-26]
gi|393151558|gb|EJC51861.1| carbamoyl-phosphate synthase small chain [Helicobacter pylori Hp
P-26]
Length = 375
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEAIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL++
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLE 373
>gi|373454117|ref|ZP_09545993.1| carbamoyl-phosphate synthase, small subunit [Dialister
succinatiphilus YIT 11850]
gi|371936185|gb|EHO63918.1| carbamoyl-phosphate synthase, small subunit [Dialister
succinatiphilus YIT 11850]
Length = 354
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 61/91 (67%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNV 61
FGH G NHPV +++ GRV I++QNH YA+ LP + VTH ++NDGT G+ + L +
Sbjct: 263 FGHRGSNHPVKDLRTGRVYITSQNHGYAISDEGLPDSIVVTHRSVNDGTIEGIRHKTLPI 322
Query: 62 MSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
++QYH EASPGP D+ +F +F + M+ K
Sbjct: 323 QAVQYHPEASPGPKDNFYLFAEFTKAMEEFK 353
>gi|170768545|ref|ZP_02902998.1| carbamoyl-phosphate synthase, small subunit [Escherichia albertii
TW07627]
gi|170122649|gb|EDS91580.1| carbamoyl-phosphate synthase, small subunit [Escherichia albertii
TW07627]
Length = 382
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|144897960|emb|CAM74824.1| carbamoyl-phosphate synthase small subunit [Magnetospirillum
gryphiswaldense MSR-1]
Length = 393
Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 44/90 (48%), Positives = 60/90 (66%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GH G NHPV +++ G+VEI++QNH + VD A+LP VEVTH +L D + G+ V
Sbjct: 304 GHRGANHPVKDLETGKVEITSQNHGFVVDEASLPADVEVTHRSLFDKSVEGIKAKGKPVF 363
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F F+E++ K
Sbjct: 364 SVQYHPEASPGPMDSHYLFDRFIEMIAQSK 393
>gi|432966178|ref|ZP_20155098.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE203]
gi|431475539|gb|ELH55343.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE203]
Length = 382
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|432752863|ref|ZP_19987434.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE29]
gi|431291521|gb|ELF82024.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE29]
Length = 382
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|423389803|ref|ZP_17367029.1| carbamoyl-phosphate synthase small chain [Bacillus cereus BAG1X1-3]
gi|423418204|ref|ZP_17395293.1| carbamoyl-phosphate synthase small chain [Bacillus cereus BAG3X2-1]
gi|401106477|gb|EJQ14438.1| carbamoyl-phosphate synthase small chain [Bacillus cereus BAG3X2-1]
gi|401641894|gb|EJS59611.1| carbamoyl-phosphate synthase small chain [Bacillus cereus BAG1X1-3]
Length = 365
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ G+V I++QNH YAV+ ++ +E+TH+ LNDGT GL +
Sbjct: 263 KFGHRGLNHPVKNLATGKVAITSQNHGYAVEEESVENTELEITHVALNDGTVEGLRHTKF 322
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
++QYH EAS GP+D++ +F DF+E++++ K
Sbjct: 323 PAFTVQYHPEASAGPEDANDLFEDFLEMIENFK 355
>gi|331700653|ref|YP_004397612.1| carbamoyl-phosphate synthase small subunit [Lactobacillus buchneri
NRRL B-30929]
gi|329127996|gb|AEB72549.1| carbamoyl-phosphate synthase, small subunit [Lactobacillus buchneri
NRRL B-30929]
Length = 352
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 2 FGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPALN 60
FGH G NHPV N+ G + I++QNH YAVD ++ +EVT + +ND TC GL YP
Sbjct: 258 FGHRGINHPVKNLITGDIYITSQNHGYAVDVDSVKDTPLEVTALEVNDKTCEGLRYPGRP 317
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELM 88
V S+QYH EA+PGP D+ +F DF+E+M
Sbjct: 318 VFSVQYHPEAAPGPHDATKLFDDFIEIM 345
>gi|312970125|ref|ZP_07784307.1| carbamoyl-phosphate synthase small chain [Escherichia coli 1827-70]
gi|310337623|gb|EFQ02734.1| carbamoyl-phosphate synthase small chain [Escherichia coli 1827-70]
Length = 382
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|229104450|ref|ZP_04235118.1| Carbamoyl-phosphate synthase small chain [Bacillus cereus Rock3-28]
gi|228678972|gb|EEL33181.1| Carbamoyl-phosphate synthase small chain [Bacillus cereus Rock3-28]
Length = 332
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ G+V I++QNH YAV+ ++ +E+TH+ LNDGT GL +
Sbjct: 230 KFGHRGLNHPVKNLATGKVAITSQNHGYAVEEESVENTNLEITHVALNDGTVEGLRHTKF 289
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
++QYH EAS GP+D++ +F DF+E++++ K
Sbjct: 290 PAFTVQYHPEASAGPEDANDLFEDFLEMIENFK 322
>gi|229117383|ref|ZP_04246760.1| Carbamoyl-phosphate synthase small chain [Bacillus cereus Rock1-3]
gi|228666083|gb|EEL21548.1| Carbamoyl-phosphate synthase small chain [Bacillus cereus Rock1-3]
Length = 332
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLP-KGVEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ G+V I++QNH YAV+ ++ +E+TH+ LNDGT GL +
Sbjct: 230 KFGHRGLNHPVKNLATGKVAITSQNHGYAVEEESVENTNLEITHVALNDGTVEGLRHTKF 289
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
++QYH EAS GP+D++ +F DF+E++++ K
Sbjct: 290 PAFTVQYHPEASAGPEDANDLFEDFLEMIENFK 322
>gi|170741395|ref|YP_001770050.1| carbamoyl-phosphate synthase small subunit [Methylobacterium sp.
4-46]
gi|168195669|gb|ACA17616.1| carbamoyl-phosphate synthase, small subunit [Methylobacterium sp.
4-46]
Length = 405
Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 57/90 (63%)
Query: 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVM 62
GHHG NHPV + G+VEI + NH +AVDP +LP TH++L DG+ GLA
Sbjct: 312 GHHGANHPVKDKTTGKVEIVSMNHGFAVDPQSLPGTAVETHVSLFDGSNCGLALTDRPAF 371
Query: 63 SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP DS +F FV L++ K
Sbjct: 372 SVQYHPEASPGPRDSHYLFDRFVSLIRQAK 401
>gi|423395812|ref|ZP_17373013.1| carbamoyl-phosphate synthase small chain [Bacillus cereus BAG2X1-1]
gi|423406688|ref|ZP_17383837.1| carbamoyl-phosphate synthase small chain [Bacillus cereus BAG2X1-3]
gi|401653554|gb|EJS71098.1| carbamoyl-phosphate synthase small chain [Bacillus cereus BAG2X1-1]
gi|401659978|gb|EJS77461.1| carbamoyl-phosphate synthase small chain [Bacillus cereus BAG2X1-3]
Length = 365
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKG-VEVTHINLNDGTCAGLAYPAL 59
KFGH G NHPV N+ G+V I++QNH YAV+ ++ +E+TH+ LNDGT GL +
Sbjct: 263 KFGHRGLNHPVKNLATGKVAITSQNHGYAVEEESVENTELEITHVALNDGTVEGLRHTKF 322
Query: 60 NVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
++QYH EAS GP+D++ +F DF+E++++ K
Sbjct: 323 PAFTVQYHPEASAGPEDANDLFEDFLEMIENFK 355
>gi|419951355|ref|ZP_14467548.1| carbamoyl phosphate synthase small subunit, partial [Escherichia
coli CUMT8]
gi|388414640|gb|EIL74589.1| carbamoyl phosphate synthase small subunit, partial [Escherichia
coli CUMT8]
Length = 222
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 127 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 186
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 187 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 221
>gi|365968957|ref|YP_004950518.1| carbamoyl-phosphate synthase small subunit [Enterobacter cloacae
EcWSU1]
gi|365747870|gb|AEW72097.1| Carbamoyl-phosphate synthase small chain [Enterobacter cloacae
EcWSU1]
Length = 391
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I N V I+AQNH +AVD A++P + VTH +L DGT G+
Sbjct: 296 KFGHHGGNHPVKDIDNNTVMITAQNHGFAVDEASMPANLRVTHKSLFDGTLQGIHRTDKP 355
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 356 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 390
>gi|422783199|ref|ZP_16835983.1| carbamoyl-phosphate synthase [Escherichia coli TW10509]
gi|323975801|gb|EGB70897.1| carbamoyl-phosphate synthase [Escherichia coli TW10509]
Length = 382
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 381
>gi|415814049|ref|ZP_11505712.1| carbamoyl-phosphate synthase small chain [Escherichia coli LT-68]
gi|323171451|gb|EFZ57098.1| carbamoyl-phosphate synthase small chain [Escherichia coli LT-68]
Length = 376
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 281 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 340
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 341 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 375
>gi|414574210|ref|ZP_11431425.1| carbamoyl-phosphate synthase small chain [Shigella sonnei 3233-85]
gi|415802151|ref|ZP_11499966.1| carbamoyl-phosphate synthase small chain [Escherichia coli E128010]
gi|416895376|ref|ZP_11925277.1| carbamoyl-phosphate synthase small chain [Escherichia coli STEC_7v]
gi|417584098|ref|ZP_12234892.1| carbamoyl-phosphate synthase small chain [Escherichia coli
STEC_B2F1]
gi|417589645|ref|ZP_12240366.1| carbamoyl-phosphate synthase small chain [Escherichia coli 2534-86]
gi|417670964|ref|ZP_12320466.1| carbamoyl-phosphate synthase small chain [Shigella dysenteriae
155-74]
gi|417684068|ref|ZP_12333409.1| carbamoyl-phosphate synthase small chain [Shigella boydii 3594-74]
gi|419326842|ref|ZP_13868480.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC12C]
gi|420284460|ref|ZP_14786680.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW10246]
gi|420345101|ref|ZP_14846536.1| carbamoyl-phosphate synthase small chain [Shigella boydii 965-58]
gi|421815548|ref|ZP_16251238.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
8.0416]
gi|424100338|ref|ZP_17835547.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FRIK1990]
gi|424107162|ref|ZP_17841783.1| carbamoylphosphate synthetase small subunit [Escherichia coli
93-001]
gi|424113137|ref|ZP_17847336.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA3]
gi|424131489|ref|ZP_17864345.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA10]
gi|424453101|ref|ZP_17904688.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA33]
gi|424465840|ref|ZP_17916077.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA41]
gi|424566582|ref|ZP_18007548.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4448]
gi|425147333|ref|ZP_18547297.1| carbamoyl-phosphate synthase small chain [Escherichia coli 10.0869]
gi|425153381|ref|ZP_18552968.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA34]
gi|425159843|ref|ZP_18559053.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FDA506]
gi|425183670|ref|ZP_18581330.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FRIK1997]
gi|425196701|ref|ZP_18593393.1| carbamoylphosphate synthetase small subunit [Escherichia coli
NE037]
gi|425308784|ref|ZP_18698296.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1735]
gi|425320787|ref|ZP_18709508.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1737]
gi|425345435|ref|ZP_18732283.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1849]
gi|428987362|ref|ZP_19056689.1| carbamoyl-phosphate synthase small chain [Escherichia coli 93.0056]
gi|429011862|ref|ZP_19079151.1| carbamoyl-phosphate synthase small chain [Escherichia coli 95.0943]
gi|429059063|ref|ZP_19123235.1| carbamoyl-phosphate synthase small chain [Escherichia coli 97.0007]
gi|429823510|ref|ZP_19355067.1| carbamoyl-phosphate synthase small chain [Escherichia coli 96.0109]
gi|444922223|ref|ZP_21241988.1| carbamoyl-phosphate synthase small chain [Escherichia coli
09BKT078844]
gi|444950636|ref|ZP_21268880.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.0848]
gi|444967169|ref|ZP_21284655.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.1793]
gi|445037864|ref|ZP_21353347.1| carbamoyl-phosphate synthase small chain [Escherichia coli PA35]
gi|323160050|gb|EFZ46013.1| carbamoyl-phosphate synthase small chain [Escherichia coli E128010]
gi|327255007|gb|EGE66610.1| carbamoyl-phosphate synthase small chain [Escherichia coli STEC_7v]
gi|332090326|gb|EGI95424.1| carbamoyl-phosphate synthase small chain [Shigella boydii 3594-74]
gi|332098344|gb|EGJ03317.1| carbamoyl-phosphate synthase small chain [Shigella dysenteriae
155-74]
gi|345332329|gb|EGW64787.1| carbamoyl-phosphate synthase small chain [Escherichia coli
STEC_B2F1]
gi|345346003|gb|EGW78339.1| carbamoyl-phosphate synthase small chain [Escherichia coli 2534-86]
gi|378177742|gb|EHX38530.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC12C]
gi|390670860|gb|EIN47348.1| carbamoylphosphate synthetase small subunit [Escherichia coli
93-001]
gi|390674783|gb|EIN50948.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FRIK1990]
gi|390689900|gb|EIN64802.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA3]
gi|390709673|gb|EIN82751.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA10]
gi|390758032|gb|EIO27500.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA33]
gi|390777168|gb|EIO45012.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA41]
gi|390796248|gb|EIO63524.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW10246]
gi|390917591|gb|EIP76008.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4448]
gi|391276884|gb|EIQ35645.1| carbamoyl-phosphate synthase small chain [Shigella boydii 965-58]
gi|391290095|gb|EIQ48570.1| carbamoyl-phosphate synthase small chain [Shigella sonnei 3233-85]
gi|408087266|gb|EKH20715.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA34]
gi|408091871|gb|EKH25070.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FDA506]
gi|408117328|gb|EKH48513.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FRIK1997]
gi|408131494|gb|EKH61536.1| carbamoylphosphate synthetase small subunit [Escherichia coli
NE037]
gi|408240913|gb|EKI63564.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1735]
gi|408254705|gb|EKI76203.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1737]
gi|408280299|gb|EKI99851.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1849]
gi|408587312|gb|EKK61968.1| carbamoyl-phosphate synthase small chain [Escherichia coli 10.0869]
gi|408597943|gb|EKK71913.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
8.0416]
gi|427252261|gb|EKW18750.1| carbamoyl-phosphate synthase small chain [Escherichia coli 93.0056]
gi|427271607|gb|EKW36398.1| carbamoyl-phosphate synthase small chain [Escherichia coli 95.0943]
gi|427323667|gb|EKW85221.1| carbamoyl-phosphate synthase small chain [Escherichia coli 97.0007]
gi|429260713|gb|EKY44244.1| carbamoyl-phosphate synthase small chain [Escherichia coli 96.0109]
gi|444552347|gb|ELV30185.1| carbamoyl-phosphate synthase small chain [Escherichia coli
09BKT078844]
gi|444572878|gb|ELV49279.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.0848]
gi|444587139|gb|ELV62609.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.1793]
gi|444664408|gb|ELW36596.1| carbamoyl-phosphate synthase small chain [Escherichia coli PA35]
Length = 376
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 281 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 340
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 341 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 375
>gi|451816307|ref|YP_007452759.1| carbamoyl-phosphate synthetase subunit A [Synechocystis sp. PCC
6803]
gi|1653784|dbj|BAA18695.1| carbamoyl-phosphate synthetase subunit A [Synechocystis sp. PCC
6803]
gi|451782276|gb|AGF53245.1| carbamoyl-phosphate synthetase subunit A [Synechocystis sp. PCC
6803]
Length = 424
Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGH G N P Q +VEI++QNH +AV +L + VE+TH NLND T AGL + L
Sbjct: 330 KFGHRGLNQPCGLEQ--QVEITSQNHGFAVTEGSLAEEVEITHFNLNDKTVAGLRHKELP 387
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S+QYH EASPGP D+D +F FV+LM+ K
Sbjct: 388 FFSVQYHPEASPGPHDADYLFEKFVKLMRQQK 419
>gi|440289164|ref|YP_007341929.1| carbamoyl-phosphate synthase small subunit [Enterobacteriaceae
bacterium strain FGI 57]
gi|440048686|gb|AGB79744.1| carbamoyl-phosphate synthase small subunit [Enterobacteriaceae
bacterium strain FGI 57]
Length = 382
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 60/95 (63%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +I V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 287 KFGHHGGNHPVKDIDKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRQSA 381
>gi|420531765|ref|ZP_15030137.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori Hp
P-28b]
gi|393136025|gb|EJC36417.1| carbamoyl-phosphate synthase, small subunit [Helicobacter pylori Hp
P-28b]
Length = 375
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHG NHPV N++ VEI+AQNHNY V P + + +TH NL D T G+ Y
Sbjct: 286 KFGHHGSNHPVKNLETNAVEITAQNHNYCV-PEEIEEIATITHRNLFDNTIEGVRYKNAP 344
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMK 89
++S+Q+H E+SPGP +S +F++FVEL++
Sbjct: 345 IISVQHHPESSPGPKESHYIFKEFVELLE 373
>gi|383812820|ref|ZP_09968247.1| carbamoyl phosphate synthase small subunit [Serratia sp. M24T3]
gi|383298230|gb|EIC86537.1| carbamoyl phosphate synthase small subunit [Serratia sp. M24T3]
Length = 382
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 60/92 (65%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV NI N V I+AQNH +AV+ A+LP + TH +L DGT GL
Sbjct: 287 KFGHHGGNHPVKNIDNNTVMITAQNHGFAVEEASLPATLRTTHKSLFDGTLQGLHRTDKP 346
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92
S Q H EASPGP D+ +F F+EL+++ +
Sbjct: 347 AFSFQGHPEASPGPHDAAPLFDHFIELIEAYR 378
>gi|424814942|ref|ZP_18240093.1| carbamoyl phosphate synthase small subunit [Escherichia fergusonii
ECD227]
gi|325495962|gb|EGC93821.1| carbamoyl phosphate synthase small subunit [Escherichia fergusonii
ECD227]
Length = 391
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%)
Query: 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALN 60
KFGHHGGNHPV +++ V I+AQNH +AVD ATLP + VTH +L DGT G+
Sbjct: 296 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKP 355
Query: 61 VMSLQYHLEASPGPDDSDCVFRDFVELMKSVKYRA 95
S Q H EASPGP D+ +F F+EL++ + A
Sbjct: 356 AFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA 390
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,667,687,875
Number of Sequences: 23463169
Number of extensions: 60175042
Number of successful extensions: 143427
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6839
Number of HSP's successfully gapped in prelim test: 166
Number of HSP's that attempted gapping in prelim test: 134294
Number of HSP's gapped (non-prelim): 7032
length of query: 95
length of database: 8,064,228,071
effective HSP length: 64
effective length of query: 31
effective length of database: 6,562,585,255
effective search space: 203440142905
effective search space used: 203440142905
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)