Query 047544
Match_columns 95
No_of_seqs 103 out of 1084
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 21:20:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047544.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047544hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1a9x_B Carbamoyl phosphate syn 99.9 8.1E-25 2.8E-29 165.9 9.3 92 1-92 286-377 (379)
2 1s1m_A CTP synthase; CTP synth 99.7 6.9E-18 2.4E-22 132.7 5.0 72 21-92 464-540 (545)
3 1vco_A CTP synthetase; tetrame 99.7 2E-17 7E-22 130.2 4.8 73 22-94 467-549 (550)
4 3fij_A LIN1909 protein; 11172J 99.7 1.1E-16 3.7E-21 114.6 7.7 73 16-92 169-244 (254)
5 2v4u_A CTP synthase 2; pyrimid 99.6 1E-16 3.5E-21 117.1 4.5 73 19-92 199-278 (289)
6 2w7t_A CTP synthetase, putativ 99.6 8.6E-17 2.9E-21 116.6 2.7 74 18-92 174-258 (273)
7 1qdl_B Protein (anthranilate s 99.6 2.3E-15 8E-20 103.6 9.7 67 16-86 127-193 (195)
8 2a9v_A GMP synthase; structura 99.6 2.2E-15 7.6E-20 105.3 8.6 77 10-91 126-202 (212)
9 3nva_A CTP synthase; rossman f 99.6 1.9E-16 6.5E-21 124.1 2.6 68 22-90 462-534 (535)
10 1wl8_A GMP synthase [glutamine 99.6 3.5E-15 1.2E-19 101.9 8.2 70 16-90 119-188 (189)
11 2vpi_A GMP synthase; guanine m 99.6 3.5E-15 1.2E-19 105.0 8.2 69 15-89 142-211 (218)
12 1i1q_B Anthranilate synthase c 99.6 1.7E-14 5.8E-19 98.9 9.1 69 16-90 123-191 (192)
13 2ywj_A Glutamine amidotransfer 99.5 5.9E-14 2E-18 95.5 6.8 63 18-90 122-185 (186)
14 1l9x_A Gamma-glutamyl hydrolas 99.5 3.6E-15 1.2E-19 110.0 0.3 69 24-93 190-281 (315)
15 2ywb_A GMP synthase [glutamine 99.4 8.5E-14 2.9E-18 108.0 5.7 75 10-89 111-185 (503)
16 1gpw_B Amidotransferase HISH; 99.4 5.2E-14 1.8E-18 96.7 2.8 66 18-91 134-200 (201)
17 3d54_D Phosphoribosylformylgly 99.4 5.7E-13 2E-17 91.7 7.3 65 18-88 135-211 (213)
18 1gpm_A GMP synthetase, XMP ami 99.4 4.5E-13 1.5E-17 104.5 6.6 66 18-88 136-201 (525)
19 3tqi_A GMP synthase [glutamine 99.4 9.5E-13 3.2E-17 102.8 7.0 66 18-88 139-204 (527)
20 3uow_A GMP synthetase; structu 99.3 1.6E-12 5.6E-17 102.1 7.5 74 10-88 155-229 (556)
21 3r75_A Anthranilate/para-amino 99.3 1.1E-12 3.8E-17 104.8 6.5 84 3-92 548-637 (645)
22 2vxo_A GMP synthase [glutamine 99.3 3.3E-12 1.1E-16 102.8 7.6 63 17-85 149-211 (697)
23 1q7r_A Predicted amidotransfer 99.3 1E-11 3.6E-16 86.7 6.9 61 22-92 153-213 (219)
24 4gud_A Imidazole glycerol phos 99.3 9E-13 3.1E-17 91.0 1.2 61 23-91 147-207 (211)
25 2nv0_A Glutamine amidotransfer 99.2 2.2E-11 7.4E-16 83.3 7.7 65 18-93 128-192 (196)
26 1o1y_A Conserved hypothetical 99.2 1.8E-11 6.1E-16 86.8 7.2 61 16-89 141-201 (239)
27 2ywd_A Glutamine amidotransfer 99.2 2.2E-11 7.6E-16 82.6 6.5 57 23-89 134-190 (191)
28 2iss_D Glutamine amidotransfer 99.1 7.2E-11 2.4E-15 81.7 4.9 61 17-88 147-207 (208)
29 3l7n_A Putative uncharacterize 99.1 1.8E-10 6.2E-15 81.2 5.6 69 10-90 128-196 (236)
30 3m3p_A Glutamine amido transfe 99.0 6.1E-10 2.1E-14 79.9 7.8 50 16-71 131-180 (250)
31 1ka9_H Imidazole glycerol phos 99.0 1.2E-10 4.1E-15 80.0 2.7 59 22-88 138-200 (200)
32 2abw_A PDX2 protein, glutamina 98.9 1.6E-09 5.4E-14 75.6 5.2 60 25-92 153-217 (227)
33 1jvn_A Glutamine, bifunctional 98.8 6.5E-10 2.2E-14 87.3 -0.9 66 18-87 145-214 (555)
34 2h2w_A Homoserine O-succinyltr 97.5 0.00011 3.7E-09 54.3 4.9 62 9-72 188-251 (312)
35 2vdj_A Homoserine O-succinyltr 97.4 9.8E-05 3.4E-09 54.2 3.9 60 9-72 177-240 (301)
36 3ugj_A Phosphoribosylformylgly 39.8 33 0.0011 29.8 4.4 39 50-88 1251-1302(1303)
37 2dn9_A DNAJ homolog subfamily 24.0 70 0.0024 17.6 2.8 22 62-83 31-52 (79)
38 1j7g_A D-tyrosyl-tRNA(Tyr) dea 23.4 28 0.00094 22.8 1.0 18 74-91 99-116 (144)
39 2dbo_A D-tyrosyl-tRNA(Tyr) dea 23.2 28 0.00096 22.8 1.0 18 74-91 99-116 (148)
40 1jke_A O145, D-Tyr-trnaTyr dea 23.1 29 0.00098 22.7 1.0 18 74-91 99-116 (145)
41 3ko5_A D-tyrosyl-tRNA(Tyr) dea 21.5 31 0.001 23.0 1.0 17 74-90 109-125 (164)
42 1tc5_A Probable eukaryotic D-a 20.1 40 0.0014 23.1 1.3 26 64-91 111-136 (194)
No 1
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=99.91 E-value=8.1e-25 Score=165.87 Aligned_cols=92 Identities=49% Similarity=0.802 Sum_probs=84.8
Q ss_pred CCCCCcCCcceeecCCCeEEEccccceeEEccCCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCCCCCChHHH
Q 047544 1 KFGHHGGNHPVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCV 80 (95)
Q Consensus 1 ~~g~~g~n~pv~~~~~~~i~~~s~~H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~i 80 (95)
++||+|.||||.++.++++++++++|+|+|+.++||++++++|++.+|++||||++++.|++|||||||..+++.+...|
T Consensus 286 ~~gh~g~n~pv~~~~~g~v~its~~H~~aV~~~~Lp~~~~v~a~s~~Dg~ieai~~~~~pi~gVQFHPE~~~~p~d~~~L 365 (379)
T 1a9x_B 286 KFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGNPEASPGPHDAAPL 365 (379)
T ss_dssp EEEEEEEEEEEEETTTTEEEEEEEEEEEEECSTTCCTTEEEEEEETTTCCEEEEEESSSSEEEESSCTTCSSSCSTTTHH
T ss_pred ccccccCceeeEecCCCcEEEEecCccceEecccCCCCeEEEEEeCCCCcEEEEEECCCCEEEEEeCCcCCCCcccHHHH
Confidence 46899999999999999999999999999987789999999999878999999999999999999999999877777789
Q ss_pred HHHHHHHHHhhh
Q 047544 81 FRDFVELMKSVK 92 (95)
Q Consensus 81 f~~Fi~~~~~~~ 92 (95)
|++|++++++++
T Consensus 366 f~~Fl~~~~~~~ 377 (379)
T 1a9x_B 366 FDHFIELIEQYR 377 (379)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999999997654
No 2
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=99.70 E-value=6.9e-18 Score=132.73 Aligned_cols=72 Identities=21% Similarity=0.355 Sum_probs=60.6
Q ss_pred EccccceeEEccCC---C-CCCeEEEEEeCCCCeEEEEEeCCCCEE-EEeccCCCCCCCCChHHHHHHHHHHHHhhh
Q 047544 21 ISAQNHNYAVDPAT---L-PKGVEVTHINLNDGTCAGLAYPALNVM-SLQYHLEASPGPDDSDCVFRDFVELMKSVK 92 (95)
Q Consensus 21 ~~s~~H~~~v~~~~---l-~~~~~v~a~~~~dg~iEai~~~~~pi~-gvQfHPE~~~~~~~~~~if~~Fi~~~~~~~ 92 (95)
.++++|+|+|++.. + +++|+++|++++++.|||++++++|+| |||||||+.+.+.++.+||++|++++.+++
T Consensus 464 ~e~h~Hry~VNs~~~~~l~~~gl~v~a~s~dg~~VEaie~~~~p~flGVQFHPE~~~~p~~g~~LF~~Fv~aa~~~~ 540 (545)
T 1s1m_A 464 VERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQ 540 (545)
T ss_dssp EEEEEECCEECHHHHHHHHHTTCEEEEECSSSCCEEEEECTTSSSEEEESSCGGGTCCTTTCCHHHHHHHHHHHHHH
T ss_pred EEecCcceEEChHHhhhcccCCeEEEEECCCCCceEEEEeCCCCEEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence 36889999997643 3 379999999754449999999999987 999999999887777799999999997654
No 3
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=99.68 E-value=2e-17 Score=130.18 Aligned_cols=73 Identities=25% Similarity=0.333 Sum_probs=61.5
Q ss_pred ccccceeEEccC---CCC-CCeEEEEEeCC-----CCeEEEEEeCCCCEE-EEeccCCCCCCCCChHHHHHHHHHHHHhh
Q 047544 22 SAQNHNYAVDPA---TLP-KGVEVTHINLN-----DGTCAGLAYPALNVM-SLQYHLEASPGPDDSDCVFRDFVELMKSV 91 (95)
Q Consensus 22 ~s~~H~~~v~~~---~l~-~~~~v~a~~~~-----dg~iEai~~~~~pi~-gvQfHPE~~~~~~~~~~if~~Fi~~~~~~ 91 (95)
++++|+|.|++. .++ .++.++|++++ |+.||||+++++|+| |||||||+.+.+.++.+||++|++++.++
T Consensus 467 e~h~H~Y~Vns~~~~~l~~~gl~v~a~s~dG~g~~~~~VeaIe~~~~p~fvGVQFHPE~~~~p~~g~~LF~~Fv~aa~~~ 546 (550)
T 1vco_A 467 ERHRHRYEVNPLYVDGLERAGLVVSATTPGMRGRGAGLVEAIELKDHPFFLGLQSHPEFKSRPMRPSPPFVGFVEAALAY 546 (550)
T ss_dssp EEEEESEEECHHHHHHHHHHTEEEEEECCCBTTBSTTCEEEEEETTSSSEEEESSCGGGGCBTTBCCHHHHHHHHHHHHH
T ss_pred eeccceEEEchHHhhccccCCeEEEEEeCCCCccCCCcEEEEEeCCCCEEEEEEeCCccCCCCCChHHHHHHHHHHHHhh
Confidence 688999999764 355 69999999865 449999999999988 99999999887766779999999999877
Q ss_pred hcc
Q 047544 92 KYR 94 (95)
Q Consensus 92 ~~~ 94 (95)
+..
T Consensus 547 ~~~ 549 (550)
T 1vco_A 547 QER 549 (550)
T ss_dssp TC-
T ss_pred ccc
Confidence 654
No 4
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=99.67 E-value=1.1e-16 Score=114.63 Aligned_cols=73 Identities=19% Similarity=0.253 Sum_probs=60.3
Q ss_pred CCeEEEccccceeEEccCCCCCCeEEEEEeCCCCeEEEEEeC-CCC-EEEEeccCCCCCCCC-ChHHHHHHHHHHHHhhh
Q 047544 16 NGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYP-ALN-VMSLQYHLEASPGPD-DSDCVFRDFVELMKSVK 92 (95)
Q Consensus 16 ~~~i~~~s~~H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~-~~p-i~gvQfHPE~~~~~~-~~~~if~~Fi~~~~~~~ 92 (95)
...+.++ ++|+++|+ .+|++++++|++ +||.||||++. ++| ++|||||||+...+. .+.+||++|+++|+.++
T Consensus 169 ~~~~~v~-~~H~~~v~--~l~~g~~v~a~s-~dg~ieai~~~~~~~~~~gvQfHPE~~~~~~~~~~~lf~~Fv~~~~~~~ 244 (254)
T 3fij_A 169 PNKKLVN-SLHHQFIK--KLAPSFKVTART-ADGMIEAVEGDNLPSWYLGVQWHPELMFQTDPESEQLFQALVDESKKTM 244 (254)
T ss_dssp CTTEEEC-CBCSCEES--SCCSSEEEEEEE-TTCCEEEEEESSCSSCEEEESSCGGGTGGGCHHHHHHHHHHHHHHHSCC
T ss_pred CCcEEEE-Eeccchhh--ccCCCcEEEEEe-CCCcEEEEEecCCCCeEEEEEcCCccCCCCCchHHHHHHHHHHHHHHHH
Confidence 3456664 57889996 599999999997 59999999999 998 899999999986433 35689999999998653
No 5
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=99.64 E-value=1e-16 Score=117.06 Aligned_cols=73 Identities=15% Similarity=0.222 Sum_probs=59.0
Q ss_pred EEEccc-cceeEEccC---CCC-CCeEEEEEeCCCCe-EEEEEeCCCCEE-EEeccCCCCCCCCChHHHHHHHHHHHHhh
Q 047544 19 VEISAQ-NHNYAVDPA---TLP-KGVEVTHINLNDGT-CAGLAYPALNVM-SLQYHLEASPGPDDSDCVFRDFVELMKSV 91 (95)
Q Consensus 19 i~~~s~-~H~~~v~~~---~l~-~~~~v~a~~~~dg~-iEai~~~~~pi~-gvQfHPE~~~~~~~~~~if~~Fi~~~~~~ 91 (95)
..++++ +|+|+|+++ .|| ++|+++|++ +||. ||||+++++|++ |||||||+...+.+..+||++|++.+.+.
T Consensus 199 ~~v~~~H~H~y~vn~~~v~~l~~~g~~v~A~s-~dg~~ieaie~~~~p~~lGvQfHPE~~~~~~~~~~lf~~Fv~~~~~~ 277 (289)
T 2v4u_A 199 PFIEERHRHRFEVNPNLIKQFEQNDLSFVGQD-VDGDRMEIIELANHPYFVGVQFHPEFSSRPMKPSPPYLGLLLAATGN 277 (289)
T ss_dssp SEEEEEEEECEEECGGGSGGGTTSSEEEEEEE-TTSCSEEEEEESSSSCEEEESSBGGGGCBTTBCCHHHHHHHHHHHTC
T ss_pred ceEEEecccccccCHHHHHhcccCCeEEEEEc-CCCCeEEEEEcCCCCeEEEEECCCCCCCCCCchHHHHHHHHHHHHhh
Confidence 455544 478998864 467 899999997 5887 999999999975 99999999876555568999999998764
Q ss_pred h
Q 047544 92 K 92 (95)
Q Consensus 92 ~ 92 (95)
.
T Consensus 278 ~ 278 (289)
T 2v4u_A 278 L 278 (289)
T ss_dssp H
T ss_pred h
Confidence 3
No 6
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=99.62 E-value=8.6e-17 Score=116.60 Aligned_cols=74 Identities=19% Similarity=0.336 Sum_probs=58.6
Q ss_pred eEEEcc-ccceeEEccC---CC-CCCeEEEEEeCCC----C-eEEEEEeCCCCEE-EEeccCCCCCCCCChHHHHHHHHH
Q 047544 18 RVEISA-QNHNYAVDPA---TL-PKGVEVTHINLND----G-TCAGLAYPALNVM-SLQYHLEASPGPDDSDCVFRDFVE 86 (95)
Q Consensus 18 ~i~~~s-~~H~~~v~~~---~l-~~~~~v~a~~~~d----g-~iEai~~~~~pi~-gvQfHPE~~~~~~~~~~if~~Fi~ 86 (95)
...+++ ++|+|.|+++ .| |++++++|++. | | .||||++.++|++ |||||||+...+.+..+||++|++
T Consensus 174 ~~~v~~~H~Hsy~v~~~~v~~l~~~g~~v~A~s~-d~~~~g~~ieaie~~~~p~~~GvQfHPE~~~~~~~~~~l~~~Fv~ 252 (273)
T 2w7t_A 174 SNIVVERHRHRYEVNTAYFEDLRKAGLCISAVTD-PTFSSRCRVEAVENPSLRFFLAVQFHPEFISTPMDPAPTYLSFMA 252 (273)
T ss_dssp CSEEEEEEEECCEECGGGHHHHHHTTCEEEEESC-TTCCTTCCEEEEECTTSSSEEEESSCGGGSCBTTBCCHHHHHHHH
T ss_pred CceEEeecccccccCHHHHHhhccCCcEEEEEcC-CcCCCCCeEEEEEcCCCCeEEEEeCCCCcCCCCCchHHHHHHHHH
Confidence 344544 4589999764 35 68999999974 6 6 8999999999965 999999998655544689999999
Q ss_pred HHHhhh
Q 047544 87 LMKSVK 92 (95)
Q Consensus 87 ~~~~~~ 92 (95)
.+.++.
T Consensus 253 ~~~~~~ 258 (273)
T 2w7t_A 253 AAAKKD 258 (273)
T ss_dssp HHHTCC
T ss_pred HHHHHH
Confidence 998753
No 7
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=99.62 E-value=2.3e-15 Score=103.58 Aligned_cols=67 Identities=15% Similarity=0.257 Sum_probs=56.2
Q ss_pred CCeEEEccccceeEEccCCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHHH
Q 047544 16 NGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVE 86 (95)
Q Consensus 16 ~~~i~~~s~~H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi~ 86 (95)
+..+. +.++|+++|+ .+|++++++|++.+||.|||+++++++++|||||||.... ..+..||++|++
T Consensus 127 ~~~~~-v~~~H~~~v~--~l~~~~~vla~s~~~g~i~a~~~~~~~~~gvQfHPE~~~~-~~g~~l~~~f~~ 193 (195)
T 1qdl_B 127 AKEFK-ATRYHSLVVD--EVHRPLIVDAISAEDNEIMAIHHEEYPIYGVQFHPESVGT-SLGYKILYNFLN 193 (195)
T ss_dssp CSEEE-EEEEEEEEEE--CCCTTEEEEEEESSSCCEEEEEESSSSEEEESSBTTSTTC-TTHHHHHHHHHH
T ss_pred CCceE-Eeccccchhh--hCCCCcEEEEEECCCCcEEEEEeCCCCEEEEecCCCCCCC-ccHHHHHHHHHh
Confidence 34455 4678999996 5899999999974689999999999899999999999853 356789999997
No 8
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=99.61 E-value=2.2e-15 Score=105.32 Aligned_cols=77 Identities=17% Similarity=0.267 Sum_probs=61.4
Q ss_pred ceeecCCCeEEEccccceeEEccCCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHHHHHH
Q 047544 10 PVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELMK 89 (95)
Q Consensus 10 pv~~~~~~~i~~~s~~H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi~~~~ 89 (95)
|+.......+.+ .+.|+++|+ .+|++++++|++ +|+.|||+++++.+++|||||||+...+ .+..||++|++.|+
T Consensus 126 ~l~~~~~~~~~v-~~~H~~~v~--~l~~~~~vlA~s-~d~~i~ai~~~~~~i~gvQfHPE~~~~~-~g~~l~~~F~~~~~ 200 (212)
T 2a9v_A 126 NIFGGLPSEITV-WENHNDEII--NLPDDFTLAASS-ATCQVQGFYHKTRPIYATQFHPEVEHTQ-YGRDIFRNFIGICA 200 (212)
T ss_dssp GGGTTCCSEEEE-EEEEEEEEE--SCCTTEEEEEEC-SSCSCSEEEESSSSEEEESSCTTSTTST-THHHHHHHHHHHHH
T ss_pred hhHhcCCCceEE-EeEhhhhHh--hCCCCcEEEEEe-CCCCEEEEEECCCCEEEEEeCCCCCCCc-cHHHHHHHHHHHHH
Confidence 333333445665 567889996 489999999996 6899999999988999999999998533 46789999999887
Q ss_pred hh
Q 047544 90 SV 91 (95)
Q Consensus 90 ~~ 91 (95)
.+
T Consensus 201 ~~ 202 (212)
T 2a9v_A 201 SY 202 (212)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 9
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=99.60 E-value=1.9e-16 Score=124.12 Aligned_cols=68 Identities=24% Similarity=0.449 Sum_probs=57.0
Q ss_pred ccccceeEEcc---CCC-CCCeEEEEEeCCCCeEEEEEeCCCCE-EEEeccCCCCCCCCChHHHHHHHHHHHHh
Q 047544 22 SAQNHNYAVDP---ATL-PKGVEVTHINLNDGTCAGLAYPALNV-MSLQYHLEASPGPDDSDCVFRDFVELMKS 90 (95)
Q Consensus 22 ~s~~H~~~v~~---~~l-~~~~~v~a~~~~dg~iEai~~~~~pi-~gvQfHPE~~~~~~~~~~if~~Fi~~~~~ 90 (95)
..++|+|+|++ +.+ ++||.++|++ +||+||||+++++|| +|||||||+...+.++.+||++|++++.+
T Consensus 462 erHrHryeVNs~h~q~l~~~GL~vsA~s-~DG~IEAIE~~~~pf~vGVQfHPE~~~~p~~~~~LF~~Fv~Aa~~ 534 (535)
T 3nva_A 462 ERHRHRYEVNPKYVDILEDAGLVVSGIS-ENGLVEIIELPSNKFFVATQAHPEFKSRPTNPSPIYLGFIRAVAS 534 (535)
T ss_dssp EEEEECCEECHHHHHHHHHTTCEEEEEC-TTCCEEEEECTTSSCEEEESSCGGGGCCSSSCCHHHHHHHHHHTC
T ss_pred ecccccceechHHHhhcccCCeEEEEEe-CCCCEEEEEeCCCCcEEEEEeCCEecCCCCChhHHHHHHHHHHHh
Confidence 46678999975 223 5799999996 689999999999995 79999999987766667899999999854
No 10
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=99.59 E-value=3.5e-15 Score=101.89 Aligned_cols=70 Identities=17% Similarity=0.332 Sum_probs=57.3
Q ss_pred CCeEEEccccceeEEccCCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHHHHHHh
Q 047544 16 NGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELMKS 90 (95)
Q Consensus 16 ~~~i~~~s~~H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi~~~~~ 90 (95)
+..+.+ .+.|++.++ ++|++++++|++ +||.+||+++++.|++|||||||+... .++..||++|++.|++
T Consensus 119 ~~~~~~-~~~h~~~v~--~l~~~~~vla~s-~~g~i~a~~~~~~~~~gvQfHPE~~~~-~~g~~l~~~f~~~~~~ 188 (189)
T 1wl8_A 119 PKRLKV-WESHMDEVK--ELPPKFKILARS-ETCPIEAMKHEELPIYGVQFHPEVAHT-EKGEEILRNFAKLCGE 188 (189)
T ss_dssp CSEEEE-EECCSEEEE--ECCTTEEEEEEE-SSCSCSEEEESSSCEEEESSCTTSTTS-TTHHHHHHHHHHHHCC
T ss_pred CCceEE-EEEeeeehh--hCCCCcEEEEEc-CCCCEEEEEeCCceEEEEecCCCcCCC-cchHHHHHHHHHHHhh
Confidence 345665 466778885 489999999997 589999999999899999999999753 3567899999998753
No 11
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=99.59 E-value=3.5e-15 Score=105.01 Aligned_cols=69 Identities=17% Similarity=0.340 Sum_probs=56.9
Q ss_pred CCCeEEEccccceeEEccCCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHH-HHHH
Q 047544 15 QNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFV-ELMK 89 (95)
Q Consensus 15 ~~~~i~~~s~~H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi-~~~~ 89 (95)
......+ .++|+|+|+ .+|++++++|++ |+.|||+++++.+++|||||||+...+ .+.+||++|+ +.|.
T Consensus 142 l~~~~~v-~~~H~~~v~--~l~~~~~vlA~s--~~~i~ai~~~~~~i~gvQfHPE~~~~~-~g~~l~~~F~~~~~~ 211 (218)
T 2vpi_A 142 LQKEEVV-LLTHGDSVD--KVADGFKVVARS--GNIVAGIANESKKLYGAQFHPEVGLTE-NGKVILKNFLYDIAG 211 (218)
T ss_dssp CCSEEEE-EECSEEEES--SCCTTCEEEEEE--TTEEEEEEETTTTEEEESSCTTSTTST-THHHHHHHHHTTTTC
T ss_pred CCCCcEE-eehhhhHhh--hcCCCCEEEEEc--CCeEEEEEECCCCEEEEEcCCCCCCCh-hHHHHHHHHHHHHhC
Confidence 3445555 467999995 589999999997 679999999999999999999997544 4678999999 7664
No 12
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=99.56 E-value=1.7e-14 Score=98.95 Aligned_cols=69 Identities=14% Similarity=0.245 Sum_probs=54.0
Q ss_pred CCeEEEccccceeEEccCCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHHHHHHh
Q 047544 16 NGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELMKS 90 (95)
Q Consensus 16 ~~~i~~~s~~H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi~~~~~ 90 (95)
.....+ .++|++.|. .+|++++++|. .|+.++|++++..+++|||||||...++ .+..||++|++.+..
T Consensus 123 ~~~~~v-~~~H~~~v~--~lp~~~~v~a~--~~~~~~ai~~~~~~~~gvQfHPE~~~~~-~g~~il~nf~~~~~~ 191 (192)
T 1i1q_B 123 ANPLPV-ARYHSLVGS--NVPAGLTINAH--FNGMVMAVRHDADRVCGFQFHPESILTT-QGARLLEQTLAWAQQ 191 (192)
T ss_dssp CSSEEE-EECCC---C--CCCTTCEEEEE--ETTEEEEEEETTTTEEEESSBTTSTTCT-THHHHHHHHHHHHTC
T ss_pred CCCcEE-EechhhHhh--hCCCccEEEEC--CCCcEEEEEECCCCEEEEEccCcccCCc-ccHHHHHHHHHHHhc
Confidence 445554 668999995 58999999995 4799999999999999999999998544 466899999998754
No 13
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=99.48 E-value=5.9e-14 Score=95.45 Aligned_cols=63 Identities=27% Similarity=0.289 Sum_probs=52.2
Q ss_pred eEEEccccceeEEccCCC-CCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHHHHHHh
Q 047544 18 RVEISAQNHNYAVDPATL-PKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELMKS 90 (95)
Q Consensus 18 ~i~~~s~~H~~~v~~~~l-~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi~~~~~ 90 (95)
++.+ .++|+++|+ .+ |++++++|++ |+.+||+++. +++|||||||... ++..||++|++.|++
T Consensus 122 ~~~~-~~~H~~~v~--~l~~~~~~v~a~s--d~~~~a~~~~--~~~gvQfHPE~~~---~g~~l~~~F~~~~~~ 185 (186)
T 2ywj_A 122 KVYG-VFIRAPVVD--KILSDDVEVIARD--GDKIVGVKQG--KYMALSFHPELSE---DGYKVYKYFVENCVK 185 (186)
T ss_dssp EEEE-EESSCCEEE--EECCTTCEEEEEE--TTEEEEEEET--TEEEESSCGGGST---THHHHHHHHHHHHTC
T ss_pred cEEE-EEEecceee--ecCCCCeEEEEEE--CCEEEEEeeC--CEEEEECCCCcCC---chhHHHHHHHHHHhh
Confidence 4454 567999996 47 8999999996 7999999974 7999999999763 367899999998854
No 14
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=99.48 E-value=3.6e-15 Score=109.98 Aligned_cols=69 Identities=20% Similarity=0.210 Sum_probs=53.7
Q ss_pred ccceeEEccC------CCCCCeEEEEEeCCCCeEEEE---EeCCCCEEEEeccCCCCC---C-----CC------ChHHH
Q 047544 24 QNHNYAVDPA------TLPKGVEVTHINLNDGTCAGL---AYPALNVMSLQYHLEASP---G-----PD------DSDCV 80 (95)
Q Consensus 24 ~~H~~~v~~~------~l~~~~~v~a~~~~dg~iEai---~~~~~pi~gvQfHPE~~~---~-----~~------~~~~i 80 (95)
++|+|+|+++ .+|++|+++|++ .||.+|++ ++++.+++|||||||... + +. ++..|
T Consensus 190 ~~H~~~V~~~~~~~~~~l~~g~~v~A~s-~dg~ve~i~~i~~~~~~i~GVQfHPE~~~~e~~~~~~~p~s~~a~~~~~~l 268 (315)
T 1l9x_A 190 NFHKWSLSVKNFTMNEKLKKFFNVLTTN-TDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGISHAPNAVKTAFYL 268 (315)
T ss_dssp EEEEEECBHHHHHTCHHHHHHEEEEEEE-ESSSCEEEEEEEESSSCEEEESSCTTHHHHCCSSCTTCCCCHHHHHHHHHH
T ss_pred EhhhhhcCccccccccccCCCCEEEEEc-CCCCEEEEEEeccCCCCEEEEEeCCCCCcccccccccCCccHHHHHHHHHH
Confidence 4899999743 478899999997 57886655 778789999999999853 1 21 35689
Q ss_pred HHHHHHHHHhhhc
Q 047544 81 FRDFVELMKSVKY 93 (95)
Q Consensus 81 f~~Fi~~~~~~~~ 93 (95)
|++|++++++.+.
T Consensus 269 f~~Fv~~a~~~~~ 281 (315)
T 1l9x_A 269 AEFFVNEARKNNH 281 (315)
T ss_dssp HHHHHHHHTTSCC
T ss_pred HHHHHHHHHhccC
Confidence 9999999976543
No 15
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=99.44 E-value=8.5e-14 Score=108.02 Aligned_cols=75 Identities=25% Similarity=0.405 Sum_probs=59.3
Q ss_pred ceeecCCCeEEEccccceeEEccCCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHHHHHH
Q 047544 10 PVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELMK 89 (95)
Q Consensus 10 pv~~~~~~~i~~~s~~H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi~~~~ 89 (95)
|+....+....+ .++|++.|+ .+|++|+++|.+ +|+.|+|+++++.+++|||||||....+ .+..||++|++.|.
T Consensus 111 ~l~~~~~~~~~v-~~~H~~~v~--~lp~g~~v~A~s-~~~~i~ai~~~~~~~~gvQFHPE~~~~~-~g~~ll~~F~~~~~ 185 (503)
T 2ywb_A 111 PLFRGLEGEVQV-WMSHQDAVT--APPPGWRVVAET-EENPVAAIASPDGRAYGVQFHPEVAHTP-KGMQILENFLELAG 185 (503)
T ss_dssp GGGTTCCSCCEE-EEECSCEEE--ECCTTCEEEEEC-SSCSCSEEECTTSSEEEESBCTTSTTST-THHHHHHHHHHHTT
T ss_pred HHhhcCCCccEE-EEECCCccc--cCCCCCEEEEEE-CCCCEEEEEeCCCCEEEEecCCCccccc-ccHHHHHHHHHHhh
Confidence 344333334444 457999996 489999999996 6899999999999999999999998544 47799999997664
No 16
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=99.42 E-value=5.2e-14 Score=96.74 Aligned_cols=66 Identities=17% Similarity=0.097 Sum_probs=52.2
Q ss_pred eEEEccccceeEEccCCCCCCeEEEEEeCCCC-eEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHHHHHHhh
Q 047544 18 RVEISAQNHNYAVDPATLPKGVEVTHINLNDG-TCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELMKSV 91 (95)
Q Consensus 18 ~i~~~s~~H~~~v~~~~l~~~~~v~a~~~~dg-~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi~~~~~~ 91 (95)
... +.++|++.|++ + +++++|++.++| .+||+++.+ +++|||||||.. +..+..||++|++.+..+
T Consensus 134 ~~~-v~~~H~~~v~~--~--~~~vla~s~~~g~~~~a~~~~~-~i~gvQfHPE~~--~~~~~~l~~~f~~~~~~~ 200 (201)
T 1gpw_B 134 NGY-YYFVHTYRAVC--E--EEHVLGTTEYDGEIFPSAVRKG-RILGFQFHPEKS--SKIGRKLLEKVIECSLSR 200 (201)
T ss_dssp CEE-EEEEESEEEEE--C--GGGEEEEEEETTEEEEEEEEET-TEEEESSCGGGS--HHHHHHHHHHHHHHSSCC
T ss_pred CCe-EEEECcceecc--C--CCEEEEEEccCCceEEEEEECC-CEEEEECCCccc--CHhHHHHHHHHHHHhhcC
Confidence 444 46689999974 3 689999874326 799999876 899999999997 344668999999988665
No 17
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=99.40 E-value=5.7e-13 Score=91.71 Aligned_cols=65 Identities=25% Similarity=0.317 Sum_probs=50.8
Q ss_pred eEEEccccc---eeEEccCCCCCCeEEEEEeCCC--C---eEEEEEeCCCCEEEEeccCCCCCC----CCChHHHHHHHH
Q 047544 18 RVEISAQNH---NYAVDPATLPKGVEVTHINLND--G---TCAGLAYPALNVMSLQYHLEASPG----PDDSDCVFRDFV 85 (95)
Q Consensus 18 ~i~~~s~~H---~~~v~~~~l~~~~~v~a~~~~d--g---~iEai~~~~~pi~gvQfHPE~~~~----~~~~~~if~~Fi 85 (95)
.+++ .+.| +|.+. |+++.++|++ +| | .|||++++..+++|||||||.... +..+..||++|+
T Consensus 135 ~~~~-~~~H~~~s~~~~----~~~~~~~a~~-~~~ng~~~~i~a~~~~~~~~~gvQfHPE~~~~~~~~~~~g~~l~~~f~ 208 (213)
T 3d54_D 135 KIRI-PIAHGFGRYVKI----DDVNVVLRYV-KDVNGSDERIAGVLNESGNVFGLMPHPERAVEELIGGEDGKKVFQSIL 208 (213)
T ss_dssp EEEE-ECCBSSCEEECS----SCCEEEEEES-SCSSCCGGGEEEEECSSSCEEEECSCSTTTTSTTTTCSTTSHHHHHHH
T ss_pred EEEE-EeecCceEEEec----CCCcEEEEEc-CCCCCCccceeEEEcCCCCEEEEeCCHHHhcCHhhhcCccHHHHHHHH
Confidence 5665 4466 66663 3789999986 34 4 899999988899999999999862 345678999999
Q ss_pred HHH
Q 047544 86 ELM 88 (95)
Q Consensus 86 ~~~ 88 (95)
+.+
T Consensus 209 ~~~ 211 (213)
T 3d54_D 209 NYL 211 (213)
T ss_dssp HHC
T ss_pred HHh
Confidence 876
No 18
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=99.39 E-value=4.5e-13 Score=104.50 Aligned_cols=66 Identities=15% Similarity=0.192 Sum_probs=55.4
Q ss_pred eEEEccccceeEEccCCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHHHHH
Q 047544 18 RVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELM 88 (95)
Q Consensus 18 ~i~~~s~~H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi~~~ 88 (95)
...+ .+.|++.|. .+|++|+++|.+ +|+.|+|+++++.++||||||||....+ .+..||++|+..+
T Consensus 136 ~~~v-~~~H~~~V~--~lp~g~~v~A~s-~~~~i~ai~~~~~~i~gvQFHPE~~~~~-~g~~ll~nF~~~i 201 (525)
T 1gpm_A 136 LLDV-WMSHGDKVT--AIPSDFITVAST-ESCPFAIMANEEKRFYGVQFHPEVTHTR-QGMRMLERFVRDI 201 (525)
T ss_dssp EEEE-EEEECSEEE--ECCTTCEEEEEC-SSCSCSEEEETTTTEEEESBCTTSTTST-THHHHHHHHHHTT
T ss_pred ceEE-EEEccceee--eCCCCCEEEEEC-CCCCEEEEEECCCCEEEEecCCCCCcch-hHHHHHHHHHHhh
Confidence 4444 568999996 499999999996 6899999999999999999999998544 4789999999543
No 19
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=99.36 E-value=9.5e-13 Score=102.76 Aligned_cols=66 Identities=23% Similarity=0.314 Sum_probs=55.4
Q ss_pred eEEEccccceeEEccCCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHHHHH
Q 047544 18 RVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELM 88 (95)
Q Consensus 18 ~i~~~s~~H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi~~~ 88 (95)
... ..+.|++.|. .+|++|+++|.+ +|+.|+|+++++.++||||||||...+ ..+..||++|+..+
T Consensus 139 ~~~-v~~~H~d~v~--~lp~g~~v~A~s-~~~~i~ai~~~~~~~~GvQFHPE~~~t-~~G~~ll~nF~~~i 204 (527)
T 3tqi_A 139 LLD-VWMSHGDIVS--ELPPGFEATACT-DNSPLAAMADFKRRFFGLQFHPEVTHT-PQGHRILAHFVIHI 204 (527)
T ss_dssp EEE-EEEESSSCBC--SCCTTCEEEEEE-TTEEEEEEECSSSCEEEESBCSSSTTS-TTHHHHHHHHHHTT
T ss_pred ceE-EEEEcccchh--ccCCCCEEEEEe-CCCcEEEEEcCCCCEEEEEeccccccc-cccchhhhhhhhhc
Confidence 344 4667999995 599999999997 689999999999999999999999753 35678999999654
No 20
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=99.35 E-value=1.6e-12 Score=102.14 Aligned_cols=74 Identities=18% Similarity=0.228 Sum_probs=58.9
Q ss_pred ceeecC-CCeEEEccccceeEEccCCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHHHHH
Q 047544 10 PVHNIQ-NGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELM 88 (95)
Q Consensus 10 pv~~~~-~~~i~~~s~~H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi~~~ 88 (95)
|+.... +.... ..+.|++.|. .+|+++.++|.+ +++.|+|+++++.++||||||||.... ..+..||++|+..+
T Consensus 155 ~Lf~gl~~~~~~-v~~~H~d~V~--~lp~g~~vlA~s-~~~~i~ai~~~~~~i~GvQFHPE~~~~-~~G~~ll~nFl~~i 229 (556)
T 3uow_A 155 CLFENIKSDITT-VWMNHNDEVT--KIPENFYLVSSS-ENCLICSIYNKEYNIYGVQYHPEVYES-LDGELMFYNFAYNI 229 (556)
T ss_dssp GGGTTCCSSEEE-EEEEEEEEEE--ECCTTCEEEEEE-TTEEEEEEEETTTTEEEESSCTTSTTS-TTHHHHHHHHHTTT
T ss_pred hhhcccccCceE-EEEEccceee--ccCCCcEEEEEe-CCCCEEEEEECCCCEEEEEcCCCCCcc-ccchHHHHHHHHHh
Confidence 444333 44555 4678999996 499999999997 688999999999999999999999853 35788999999543
No 21
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=99.34 E-value=1.1e-12 Score=104.79 Aligned_cols=84 Identities=15% Similarity=0.179 Sum_probs=59.4
Q ss_pred CCCcCCcceeecCCCeEEEccccceeEEcc------CCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCCCCCC
Q 047544 3 GHHGGNHPVHNIQNGRVEISAQNHNYAVDP------ATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDD 76 (95)
Q Consensus 3 g~~g~n~pv~~~~~~~i~~~s~~H~~~v~~------~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~~~~~ 76 (95)
+++|.++++... +.......+|++.|.. +.+|++++++|++ +|+.||||+++. ++|||||||+...+ .
T Consensus 548 ~~~G~~~~i~~~--~~~l~~~~~~~~~v~~~h~~~~~~lp~g~~v~A~s-~dg~i~Ai~~~~--~~GVQFHPE~~~t~-~ 621 (645)
T 3r75_A 548 PNQGIQVEIDLF--GQRERVGFYNTYVAQTVRDEMDVDGVGTVAISRDP-RTGEVHALRGPT--FSSMQFHAESVLTV-D 621 (645)
T ss_dssp EEEEEEEEEEET--TEEEEEEEEEEEEEBCSCSEEEETTTEEEEEEECT-TTCBEEEEEETT--EEEESSBTTSTTCT-T
T ss_pred cccccceEEeee--cCcceecCCCcEEEEEehhhccccCCCCeEEEEEc-CCCcEEEEEcCC--EEEEEeCCeecCCc-c
Confidence 466777776532 2222223334444321 2488999999985 799999999875 69999999998543 5
Q ss_pred hHHHHHHHHHHHHhhh
Q 047544 77 SDCVFRDFVELMKSVK 92 (95)
Q Consensus 77 ~~~if~~Fi~~~~~~~ 92 (95)
+..||++|++.+...+
T Consensus 622 G~~Ll~nFl~~~~~~~ 637 (645)
T 3r75_A 622 GPRILGEAITHAIRRE 637 (645)
T ss_dssp HHHHHHHHHHHHTTTT
T ss_pred hHHHHHHHHHHHHhcc
Confidence 7899999999996544
No 22
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=99.31 E-value=3.3e-12 Score=102.81 Aligned_cols=63 Identities=19% Similarity=0.357 Sum_probs=53.3
Q ss_pred CeEEEccccceeEEccCCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHH
Q 047544 17 GRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFV 85 (95)
Q Consensus 17 ~~i~~~s~~H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi 85 (95)
....+ .+.|+++|+ .+|++|+++|.+ |+.|+|++++..++||||||||...++ .+..||++|+
T Consensus 149 ~~~~v-~~~H~~~V~--~lp~g~~vlA~s--~~~i~ai~~~~~~i~GvQFHPE~~~t~-~g~~ll~nFl 211 (697)
T 2vxo_A 149 KEEVV-LLTHGDSVD--KVADGFKVVARS--GNIVAGIANESKKLYGAQFHPEVGLTE-NGKVILKNFL 211 (697)
T ss_dssp SEEEE-CCCSSCCBS--SCCTTCEEEEEE--TTEEEEEEETTTTEEEESSCTTSSSST-THHHHHHHHH
T ss_pred ccCcc-eeeccccee--cCCCCeEEEEEe--CCceEEEEeCCCCEEEEEecccCCCCc-cchhhhhhhh
Confidence 34554 557999996 599999999997 459999999999999999999998654 4678999999
No 23
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=99.26 E-value=1e-11 Score=86.66 Aligned_cols=61 Identities=13% Similarity=0.169 Sum_probs=50.6
Q ss_pred ccccceeEEccCCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHHHHHHhhh
Q 047544 22 SAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92 (95)
Q Consensus 22 ~s~~H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi~~~~~~~ 92 (95)
..+.|++.|+. +|+++.++|++ |+.+||+++ .+++|||||||.... ..||++|++.+.+++
T Consensus 153 ~~~~h~~~v~~--l~~~~~v~a~s--dg~~ea~~~--~~i~GvQfHPE~~~~----~~l~~~fl~~~~~~~ 213 (219)
T 1q7r_A 153 GVFIRAPHIVE--AGDGVDVLATY--NDRIVAARQ--GQFLGCSFHPELTDD----HRLMQYFLNMVKEAK 213 (219)
T ss_dssp EEESSCCEEEE--ECTTCEEEEEE--TTEEEEEEE--TTEEEESSCGGGSSC----CHHHHHHHHHHHHHH
T ss_pred EEEEecceeec--cCCCcEEEEEc--CCEEEEEEE--CCEEEEEECcccCCC----HHHHHHHHHHHHHhh
Confidence 46678899863 78899999986 799999998 379999999999631 379999999987654
No 24
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=99.25 E-value=9e-13 Score=90.98 Aligned_cols=61 Identities=23% Similarity=0.212 Sum_probs=43.6
Q ss_pred cccceeEEccCCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHHHHHHhh
Q 047544 23 AQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELMKSV 91 (95)
Q Consensus 23 s~~H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi~~~~~~ 91 (95)
.++|++.+. .+..++|++ ++|.++++.+...|+||||||||+. .+.+..||++|+++|.+.
T Consensus 147 ~~~H~~~v~-----~~~~~~a~~-~~g~~~~~~v~~~~v~GvQFHPE~s--~~~G~~ll~nFl~~~ge~ 207 (211)
T 4gud_A 147 YFVHSFAMP-----VGDYTIAQC-EYGQPFSAAIQAGNYYGVQFHPERS--SKAGARLIQNFLELRGEN 207 (211)
T ss_dssp EEEESEECC-----CCTTEEEEE-ESSSEEEEEEEETTEEEESSCGGGS--HHHHHHHHHHHHHC----
T ss_pred EEEeeEEeC-----CCCeEEEEe-cCCCeEEEEEeCCCEEEEEccCEec--CccHHHHHHHHHHHhccc
Confidence 346778773 355677875 5787777777778999999999985 334668999999987643
No 25
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=99.25 E-value=2.2e-11 Score=83.25 Aligned_cols=65 Identities=17% Similarity=0.120 Sum_probs=51.7
Q ss_pred eEEEccccceeEEccCCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHHHHHHhhhc
Q 047544 18 RVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELMKSVKY 93 (95)
Q Consensus 18 ~i~~~s~~H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi~~~~~~~~ 93 (95)
.+.+ ++.|++.|+. +|+++.++|.+ |+.+||+++ .+++|+|||||.... ..+|++|++.+++.+.
T Consensus 128 ~~~~-~~~h~~~v~~--~~~~~~v~a~~--d~~~~a~~~--~~~~gvQfHPE~~~~----~~l~~~fl~~~~~~~~ 192 (196)
T 2nv0_A 128 PFTG-VFIRAPHILE--AGENVEVLSEH--NGRIVAAKQ--GQFLGCSFHPELTED----HRVTQLFVEMVEEYKQ 192 (196)
T ss_dssp CEEE-EEESCCEEEE--ECTTCEEEEEE--TTEEEEEEE--TTEEEESSCTTSSSC----CHHHHHHHHHHHHHHH
T ss_pred ceEE-EEEecceecc--cCCCcEEEEEE--CCEEEEEEE--CCEEEEEECCccCCc----hHHHHHHHHHHHhhhh
Confidence 4443 5578899863 78899999986 799999987 379999999998632 2699999999976554
No 26
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=99.24 E-value=1.8e-11 Score=86.85 Aligned_cols=61 Identities=21% Similarity=0.376 Sum_probs=48.5
Q ss_pred CCeEEEccccceeEEccCCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHHHHHH
Q 047544 16 NGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELMK 89 (95)
Q Consensus 16 ~~~i~~~s~~H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi~~~~ 89 (95)
...+. +.++|++.+ ++|++++++|++ +|+.|||+++.+ ++|||||||... .++++|++...
T Consensus 141 ~~~~~-~~~~H~~~v---~lp~~~~vlA~s-~~~~iea~~~~~--i~gvQfHPE~~~------~~~~~~~~~~~ 201 (239)
T 1o1y_A 141 PDRLR-VFQWHGDTF---DLPRRATRVFTS-EKYENQGFVYGK--AVGLQFHIEVGA------RTMKRWIEAYK 201 (239)
T ss_dssp CSEEE-EEEEESEEE---CCCTTCEEEEEC-SSCSCSEEEETT--EEEESSBSSCCH------HHHHHHHHHTH
T ss_pred CCCce-eEeecCCcc---ccCCCCEEEEEc-CCCCEEEEEECC--EEEEEeCccCCH------HHHHHHHHHhH
Confidence 33444 567899998 489999999986 688999999985 999999999952 37888877543
No 27
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.22 E-value=2.2e-11 Score=82.55 Aligned_cols=57 Identities=23% Similarity=0.198 Sum_probs=47.0
Q ss_pred cccceeEEccCCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHHHHHH
Q 047544 23 AQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELMK 89 (95)
Q Consensus 23 s~~H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi~~~~ 89 (95)
.++|++.+. .+|++++++|++ |+.+||+++. +++|+|||||... +. .||++|++.|+
T Consensus 134 ~~~Hs~~v~--~l~~~~~~~a~~--~~~~~a~~~~--~~~gvQfHPE~~~---~~-~l~~~f~~~~~ 190 (191)
T 2ywd_A 134 VFIRAPVFR--RLGEGVEVLARL--GDLPVLVRQG--KVLASSFHPELTE---DP-RLHRYFLELAG 190 (191)
T ss_dssp EEESCCEEE--EECTTCEEEEEE--TTEEEEEEET--TEEEESSCGGGSS---CC-HHHHHHHHHHT
T ss_pred EEEccccee--ccCCCcEEEEEE--CCEEEEEEEC--CEEEEEeCCCCCC---Cc-HHHHHHHHHhc
Confidence 567888885 378899999997 5999999986 4999999999753 23 79999999874
No 28
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=99.10 E-value=7.2e-11 Score=81.73 Aligned_cols=61 Identities=16% Similarity=0.131 Sum_probs=48.0
Q ss_pred CeEEEccccceeEEccCCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHHHHH
Q 047544 17 GRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELM 88 (95)
Q Consensus 17 ~~i~~~s~~H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi~~~ 88 (95)
..+.+ .+.|++.|+. +|++++++|.+ |+.+||++.. +++|+|||||.... . .||++|++.|
T Consensus 147 ~~~~~-~~~h~~~v~~--~~~~~~v~a~~--d~~~~a~~~~--~i~GvQfHPE~~~~---~-~l~~~fl~~~ 207 (208)
T 2iss_D 147 DPFRA-IFIRAPRIVE--TGKNVEILATY--DYDPVLVKEG--NILACTFHPELTDD---L-RLHRYFLEMV 207 (208)
T ss_dssp SCEEE-EESSCCEEEE--ECSSCEEEEEE--TTEEEEEEET--TEEEESSCGGGSSC---C-HHHHHHHTTC
T ss_pred CceEE-EEEeCccccc--CCCCcEEEEEE--CCEEEEEEEC--CEEEEEeCCCcCCc---H-HHHHHHHHHh
Confidence 34554 4568888863 67899999986 6999999974 79999999999742 2 7999999764
No 29
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=99.06 E-value=1.8e-10 Score=81.23 Aligned_cols=69 Identities=13% Similarity=0.143 Sum_probs=52.6
Q ss_pred ceeecCCCeEEEccccceeEEccCCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHHHHHH
Q 047544 10 PVHNIQNGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELMK 89 (95)
Q Consensus 10 pv~~~~~~~i~~~s~~H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi~~~~ 89 (95)
|+....+..+.+ .++|++. .++|++++++|.+ +++.++|+++.. +++|||||||.. ..++++|++.+.
T Consensus 128 ~l~~~~~~~~~v-~~~H~~~---~~lp~~~~vla~s-~~~~~~a~~~~~-~v~gvQfHPE~~------~~~~~~~~~~~~ 195 (236)
T 3l7n_A 128 SYLSDFSDDLLV-GHWHGDM---PGLPDKAQVLAIS-QGCPRQIIKFGP-KQYAFQCHLEFT------PELVAALIAQED 195 (236)
T ss_dssp GGGTTSCSEEEE-EEEEEEE---CCCCTTCEEEEEC-SSCSCSEEEEET-TEEEESSBSSCC------HHHHHHHHHHCS
T ss_pred hHHhcCCCCcEE-EEecCCc---ccCCChheEEEEC-CCCCEEEEEECC-CEEEEEeCCCCC------HHHHHHHHHhhh
Confidence 444333455554 5568776 3689999999996 688999999875 899999999995 468899988765
Q ss_pred h
Q 047544 90 S 90 (95)
Q Consensus 90 ~ 90 (95)
.
T Consensus 196 ~ 196 (236)
T 3l7n_A 196 D 196 (236)
T ss_dssp C
T ss_pred h
Confidence 3
No 30
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=99.04 E-value=6.1e-10 Score=79.89 Aligned_cols=50 Identities=14% Similarity=0.176 Sum_probs=42.3
Q ss_pred CCeEEEccccceeEEccCCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCC
Q 047544 16 NGRVEISAQNHNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEAS 71 (95)
Q Consensus 16 ~~~i~~~s~~H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~ 71 (95)
+..+.+ .++|++.| ++|+++.++|.+ +++.++|+++.+ +++|||||||..
T Consensus 131 ~~~~~v-~~~H~~~v---~lp~~~~vlA~s-~~~~~~a~~~~~-~~~GvQfHPE~~ 180 (250)
T 3m3p_A 131 WDELEL-FEWHYQTF---SIPPGAVHILRS-EHCANQAYVLDD-LHIGFQCHIEMQ 180 (250)
T ss_dssp SSCEEE-EEEEEEEE---CCCTTEEEEEEE-TTEEEEEEEETT-TEEEESSCTTCC
T ss_pred CCccEE-EEEcccee---ecCCCCEEEEEe-CCCCEEEEEECC-eeEEEEeCCcCC
Confidence 345554 66899999 499999999997 588999999987 599999999985
No 31
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=99.00 E-value=1.2e-10 Score=79.98 Aligned_cols=59 Identities=20% Similarity=0.270 Sum_probs=40.8
Q ss_pred ccccceeEEccCCCCCCeEEEEEeCCCC-eEEEEEeCCCCEEEEeccCCCCCCCCChHHHH---HHHHHHH
Q 047544 22 SAQNHNYAVDPATLPKGVEVTHINLNDG-TCAGLAYPALNVMSLQYHLEASPGPDDSDCVF---RDFVELM 88 (95)
Q Consensus 22 ~s~~H~~~v~~~~l~~~~~v~a~~~~dg-~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if---~~Fi~~~ 88 (95)
+.+.|++.+ + ++++ .+ |++.++| .++++.+.+ +++|||||||... ..+..|| ++|++.|
T Consensus 138 ~~~~Hs~~~-~--~~~~-~v-a~s~~~g~~~~~~~~~~-~i~gvQfHPE~~~--~~g~~l~~~~~~F~~~~ 200 (200)
T 1ka9_H 138 FYFANSYYG-P--LTPY-SL-GKGEYEGTPFTALLAKE-NLLAPQFHPEKSG--KAGLAFLALARRYFEVL 200 (200)
T ss_dssp EEEEESEEC-C--CCTT-CC-EEEEETTEEEEEEEECS-SEEEESSCTTSSH--HHHHHHHHHHHHHC---
T ss_pred EEEeccccc-C--CCCC-cE-EEEEeCCeEEEEEEeeC-CEEEEecCCCcCc--cchhHHHHHHHHHHhhC
Confidence 345677777 4 2443 46 7763227 688988877 9999999999973 4456899 9999864
No 32
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=98.90 E-value=1.6e-09 Score=75.61 Aligned_cols=60 Identities=18% Similarity=0.160 Sum_probs=46.1
Q ss_pred cceeEEccCCC-CCCeEEEEEeCC----CCeEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHHHHHHhhh
Q 047544 25 NHNYAVDPATL-PKGVEVTHINLN----DGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVELMKSVK 92 (95)
Q Consensus 25 ~H~~~v~~~~l-~~~~~v~a~~~~----dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi~~~~~~~ 92 (95)
.|++.|. .+ |+++.++|.+.. |+.++|++. .+++|+|||||.... ..||++|++.|+.+.
T Consensus 153 ~h~~~v~--~~~~~~~~vla~~~~~~~g~~~~~a~~~--~~v~gvQfHPE~~~~----~~l~~~Fl~~~~~~~ 217 (227)
T 2abw_A 153 IRAPYIR--EILSDEVKVLATFSHESYGPNIIAAVEQ--NNCLGTVFHPELLPH----TAFQQYFYEKVKNYK 217 (227)
T ss_dssp ESCCEEE--EECCTTCEEEEEEEETTTEEEEEEEEEE--TTEEEESSCGGGSSC----CHHHHHHHHHHHHHH
T ss_pred EEcceEe--ecCCCCcEEEEEcccccCCCCceEEEEE--CCEEEEEECCeeCCC----cHHHHHHHHHHHhhh
Confidence 3556664 25 889999998642 789999986 479999999998632 279999999987654
No 33
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.75 E-value=6.5e-10 Score=87.30 Aligned_cols=66 Identities=15% Similarity=0.061 Sum_probs=44.4
Q ss_pred eEEEccccceeEEcc-C-CCCCCeEEEEEeCC--CCeEEEEEeCCCCEEEEeccCCCCCCCCChHHHHHHHHHH
Q 047544 18 RVEISAQNHNYAVDP-A-TLPKGVEVTHINLN--DGTCAGLAYPALNVMSLQYHLEASPGPDDSDCVFRDFVEL 87 (95)
Q Consensus 18 ~i~~~s~~H~~~v~~-~-~l~~~~~v~a~~~~--dg~iEai~~~~~pi~gvQfHPE~~~~~~~~~~if~~Fi~~ 87 (95)
..+.+.++|.+.++. . -||+++.++|++.. |+.+||++. .+++|||||||.. ...+..||++|++.
T Consensus 145 ~~~~vHS~~~~~i~~~~~~L~~g~~vlA~s~~~~D~~i~ai~~--~~i~GvQFHPE~s--~~~g~~l~~~Fl~~ 214 (555)
T 1jvn_A 145 RYYFVHSFAAILNSEKKKNLENDGWKIAKAKYGSEEFIAAVNK--NNIFATQFHPEKS--GKAGLNVIENFLKQ 214 (555)
T ss_dssp CEEEEESEECBCCHHHHHHHHHTTCEEEEEEETTEEEEEEEEE--TTEEEESSBGGGS--HHHHHHHHHHHHTT
T ss_pred eEEEEEEEEEEecccccccCCCCCEEEEEEcCCCCCeEEEEEe--CCEEEEEeCcEec--ChhHHHHHHHHHhc
Confidence 344444455555431 0 02567888888632 579999994 5899999999975 23356899999975
No 34
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=97.51 E-value=0.00011 Score=54.31 Aligned_cols=62 Identities=8% Similarity=-0.020 Sum_probs=42.0
Q ss_pred cceeecCCCeEEEccccceeEEccCCCC--CCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCC
Q 047544 9 HPVHNIQNGRVEISAQNHNYAVDPATLP--KGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASP 72 (95)
Q Consensus 9 ~pv~~~~~~~i~~~s~~H~~~v~~~~l~--~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~ 72 (95)
+|+.......+.+-.++| -.+..+.++ +|++++|.+ +..-+.++..++..++|||+|||+..
T Consensus 188 ~pL~~g~~~~f~vphsr~-~e~~~~~v~~~pga~vLA~S-~~~~~q~~~~~~~~~~~vQgHPEyd~ 251 (312)
T 2h2w_A 188 SVLFRGHDDFFWAPHSRY-TEVKKEDIDKVPELEILAES-DEAGVYVVANKSERQIFVTGHPEYDR 251 (312)
T ss_dssp CGGGTTCCSEEEEEEEEE-EECCHHHHTTCC-CEEEEEE-TTTEEEEEECSSSSEEEECSCTTCCT
T ss_pred CccccCCCCceEeeEEec-cccCHHHccCCCCCEEEEcC-CCCcceEEEecCCCEEEEECCCCCCH
Confidence 455544455666544343 333222222 499999997 57889999998888999999999963
No 35
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=97.45 E-value=9.8e-05 Score=54.25 Aligned_cols=60 Identities=5% Similarity=-0.155 Sum_probs=42.1
Q ss_pred cceeecCCCeEEEcccc----ceeEEccCCCCCCeEEEEEeCCCCeEEEEEeCCCCEEEEeccCCCCC
Q 047544 9 HPVHNIQNGRVEISAQN----HNYAVDPATLPKGVEVTHINLNDGTCAGLAYPALNVMSLQYHLEASP 72 (95)
Q Consensus 9 ~pv~~~~~~~i~~~s~~----H~~~v~~~~l~~~~~v~a~~~~dg~iEai~~~~~pi~gvQfHPE~~~ 72 (95)
+|+.........+-.++ |...|. .+| |++++|.+ +..-+.++..++..++|||+|||...
T Consensus 177 ~pL~~g~~~~f~~phsr~~~~~~~~v~--~~p-ga~vLA~S-~~~~~~~~~~~~~~~~~vQgHpEyd~ 240 (301)
T 2vdj_A 177 VKLLQGFDELFFAVHSRHTEVRESDIR--EVK-ELTLLANS-EEAGVHLVIGQEGRQVFALGHSEYSC 240 (301)
T ss_dssp CGGGTTCCSEEEEEEEEEEECCHHHHH--TCT-TEEEEEEE-TTTEEEEEEEGGGTEEEECSCTTCCT
T ss_pred CccccCCCCceEeeeEeccCcCHHHcc--CCC-CCEEEEeC-CCCcceEEEecCCCEEEEECCCCCCH
Confidence 46554445565553333 333343 243 99999997 57889999998888999999999963
No 36
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=39.81 E-value=33 Score=29.76 Aligned_cols=39 Identities=15% Similarity=0.080 Sum_probs=27.6
Q ss_pred eEEEEEeCCCCEEEEeccCCCCCC-------C------CChHHHHHHHHHHH
Q 047544 50 TCAGLAYPALNVMSLQYHLEASPG-------P------DDSDCVFRDFVELM 88 (95)
Q Consensus 50 ~iEai~~~~~pi~gvQfHPE~~~~-------~------~~~~~if~~Fi~~~ 88 (95)
-|+||-+++.+++|.+-||||... + ..+..+|++-...|
T Consensus 1251 ~IaGi~s~~Grvlg~MpHPEr~~~~~~~~~~p~~~~~~~pw~~~F~na~~w~ 1302 (1303)
T 3ugj_A 1251 GITAVTTENGRVTIMMPHPERVFRTVANSWHPENWGEDSPWMRIFRNARKQL 1302 (1303)
T ss_dssp GEEEEECTTSSEEEESSBGGGSSBGGGCSSCCTTCCSBCTTHHHHHHHHHHH
T ss_pred hceEeECCCCCEEEEcCChHHccccccccCCCcccCCCCcHHHHHHHHHHhc
Confidence 488888888888888888887531 1 12457888877664
No 37
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.98 E-value=70 Score=17.60 Aligned_cols=22 Identities=14% Similarity=0.338 Sum_probs=12.7
Q ss_pred EEEeccCCCCCCCCChHHHHHH
Q 047544 62 MSLQYHLEASPGPDDSDCVFRD 83 (95)
Q Consensus 62 ~gvQfHPE~~~~~~~~~~if~~ 83 (95)
+..+|||+...........|..
T Consensus 31 l~~~~HPD~~~~~~~a~~~f~~ 52 (79)
T 2dn9_A 31 LAKKYHPDTNKDDPKAKEKFSQ 52 (79)
T ss_dssp HHHHTCTTTCSSCTTHHHHHHH
T ss_pred HHHHHCcCCCCCCHHHHHHHHH
Confidence 3568999987543333344443
No 38
>1j7g_A D-tyrosyl-tRNA(Tyr) deacylase; D-Tyr-tRNA(Tyr) deacylase, structural genomics, hypothetical structure 2 function project, S2F; 1.64A {Haemophilus influenzae rd KW20} SCOP: c.110.1.1
Probab=23.41 E-value=28 Score=22.76 Aligned_cols=18 Identities=11% Similarity=0.279 Sum_probs=14.5
Q ss_pred CCChHHHHHHHHHHHHhh
Q 047544 74 PDDSDCVFRDFVELMKSV 91 (95)
Q Consensus 74 ~~~~~~if~~Fi~~~~~~ 91 (95)
|+.++++|+.|++.+++.
T Consensus 99 p~~A~~LY~~f~~~l~~~ 116 (144)
T 1j7g_A 99 PALANELYEYFIQKCAEK 116 (144)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 455779999999999753
No 39
>2dbo_A D-tyrosyl-tRNA(Tyr) deacylase; D-amino acid, D-tyrosine, structural genomi NPPSFA, national project on protein structural and function analyses; 2.76A {Aquifex aeolicus}
Probab=23.21 E-value=28 Score=22.84 Aligned_cols=18 Identities=22% Similarity=0.558 Sum_probs=14.7
Q ss_pred CCChHHHHHHHHHHHHhh
Q 047544 74 PDDSDCVFRDFVELMKSV 91 (95)
Q Consensus 74 ~~~~~~if~~Fi~~~~~~ 91 (95)
|+.++++|+.|++.+++.
T Consensus 99 p~~A~~LY~~f~~~l~~~ 116 (148)
T 2dbo_A 99 PKRAKELYEKFVDKIKES 116 (148)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 456789999999999753
No 40
>1jke_A O145, D-Tyr-trnaTyr deacylase, ORF_O145; beta-alpha-barrel, hydrolase; 1.55A {Escherichia coli} SCOP: c.110.1.1
Probab=23.09 E-value=29 Score=22.72 Aligned_cols=18 Identities=28% Similarity=0.600 Sum_probs=14.5
Q ss_pred CCChHHHHHHHHHHHHhh
Q 047544 74 PDDSDCVFRDFVELMKSV 91 (95)
Q Consensus 74 ~~~~~~if~~Fi~~~~~~ 91 (95)
|+.++++|+.|++.+++.
T Consensus 99 p~~A~~LY~~f~~~l~~~ 116 (145)
T 1jke_A 99 PDRAEALYDYFVERCRQQ 116 (145)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 455779999999999753
No 41
>3ko5_A D-tyrosyl-tRNA(Tyr) deacylase; DTD, ADP, hydrolase; HET: ADP; 2.09A {Plasmodium falciparum} PDB: 3knp_A 3knf_A* 3ko3_A* 3ko4_A* 3ko7_A* 3ko9_A* 3kob_A* 3koc_A* 3kod_A 3lmt_A 3lmu_A 3lmv_A*
Probab=21.53 E-value=31 Score=23.01 Aligned_cols=17 Identities=12% Similarity=0.460 Sum_probs=14.2
Q ss_pred CCChHHHHHHHHHHHHh
Q 047544 74 PDDSDCVFRDFVELMKS 90 (95)
Q Consensus 74 ~~~~~~if~~Fi~~~~~ 90 (95)
|+.++++|+.|++.+++
T Consensus 109 p~~A~~LY~~fv~~lr~ 125 (164)
T 3ko5_A 109 PNEALIFYNKIIDEFKK 125 (164)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 45577999999999985
No 42
>1tc5_A Probable eukaryotic D-amino acid tRNA deacylase, LMAJ005534AAA; SGPP, structural genomics, PSI; 1.93A {Leishmania major} SCOP: c.110.1.1
Probab=20.10 E-value=40 Score=23.11 Aligned_cols=26 Identities=15% Similarity=0.396 Sum_probs=18.8
Q ss_pred EeccCCCCCCCCChHHHHHHHHHHHHhh
Q 047544 64 LQYHLEASPGPDDSDCVFRDFVELMKSV 91 (95)
Q Consensus 64 vQfHPE~~~~~~~~~~if~~Fi~~~~~~ 91 (95)
.|||-- ..++.+..||+.|++.++..
T Consensus 111 PsF~~A--a~pe~A~~LY~~Fv~~lr~~ 136 (194)
T 1tc5_A 111 VQFHQL--VAKDVGAALYDRFCHFVRVA 136 (194)
T ss_dssp EECTTB--CCHHHHHHHHHHHHHHHHHH
T ss_pred CCcccC--CCHHHHHHHHHHHHHHHHHh
Confidence 477652 23556789999999999754
Done!