Query 047545
Match_columns 206
No_of_seqs 205 out of 1419
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 21:21:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047545.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047545hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fu0_A Cyclophilin, putative; 100.0 3.9E-47 1.3E-51 300.7 13.8 129 78-206 5-134 (160)
2 2x7k_A Peptidyl-prolyl CIS-tra 100.0 5.9E-47 2E-51 301.3 14.1 128 79-206 12-140 (166)
3 2a2n_A Peptidylprolyl isomeras 100.0 8.8E-47 3E-51 302.7 14.9 132 75-206 18-150 (176)
4 2ok3_A Peptidyl-prolyl CIS-tra 100.0 1.3E-46 4.3E-51 298.1 13.6 127 80-206 2-129 (161)
5 1zkc_A Peptidyl-prolyl CIS-tra 100.0 3E-46 1E-50 304.0 14.9 129 78-206 19-148 (197)
6 2b71_A Cyclophilin-like protei 100.0 6.4E-46 2.2E-50 302.0 14.2 128 79-206 39-167 (196)
7 2poe_A Cyclophilin-like protei 100.0 7.2E-46 2.5E-50 299.6 14.4 128 79-206 17-149 (185)
8 2k7n_A Peptidyl-prolyl CIS-tra 100.0 1.7E-45 5.7E-50 300.8 14.5 129 78-206 11-140 (203)
9 3bo7_A Peptidyl-prolyl CIS-tra 100.0 1.3E-45 4.4E-50 301.8 13.8 129 78-206 6-147 (201)
10 1v9t_A Cyclophilin B; beta bar 100.0 7.7E-45 2.6E-49 289.2 14.4 126 79-206 5-136 (166)
11 3s6m_A Peptidyl-prolyl CIS-tra 100.0 5E-45 1.7E-49 290.6 11.8 126 79-206 4-138 (167)
12 1lop_A Cyclophilin A; rotamase 100.0 9E-45 3.1E-49 288.3 12.3 124 81-206 2-134 (164)
13 1w74_A Peptidyl-prolyl CIS-tra 100.0 1.4E-44 4.9E-49 293.1 13.1 125 79-206 24-166 (191)
14 2haq_A Cyclophilin; rotamase, 100.0 8.6E-45 3E-49 290.1 11.6 126 80-206 18-147 (172)
15 2r99_A Peptidyl-prolyl CIS-tra 100.0 4.9E-44 1.7E-48 286.2 14.7 122 84-206 22-148 (173)
16 2z6w_A Peptidyl-prolyl CIS-tra 100.0 2.5E-44 8.6E-49 285.9 12.4 124 82-206 12-140 (165)
17 2cmt_A Peptidyl-prolyl CIS-tra 100.0 6.5E-44 2.2E-48 285.2 14.5 121 85-206 22-147 (172)
18 2wfi_A Peptidyl-prolyl CIS-tra 100.0 2.9E-44 9.9E-49 289.0 12.4 126 80-206 16-154 (179)
19 2hq6_A Serologically defined c 100.0 7.4E-44 2.5E-48 287.7 14.6 126 79-205 25-151 (185)
20 1mzw_A Cyclophilin H, U-snRNP- 100.0 7.8E-44 2.7E-48 286.0 13.9 121 85-206 22-152 (177)
21 1a58_A Cyclophilin; isomerase, 100.0 5.8E-44 2E-48 286.8 12.5 125 81-206 14-151 (177)
22 2igv_A Peptidyl-prolyl CIS-tra 100.0 1.2E-43 4E-48 284.1 13.6 122 84-206 14-147 (173)
23 2he9_A NK-tumor recognition pr 100.0 7.9E-44 2.7E-48 289.1 12.4 126 80-206 26-164 (192)
24 1qng_A Peptidyl-prolyl CIS-tra 100.0 1.3E-43 4.3E-48 283.1 13.1 122 84-206 14-146 (170)
25 3pmp_A Cyclophilin A; peptidyl 100.0 1E-43 3.5E-48 282.2 12.3 125 81-206 10-139 (164)
26 3ich_A Peptidyl-prolyl CIS-tra 100.0 7.8E-44 2.7E-48 288.3 11.2 122 84-206 26-152 (188)
27 3rdd_A Peptidyl-prolyl CIS-tra 100.0 5E-43 1.7E-47 282.8 13.7 126 80-206 24-159 (184)
28 2poy_A Peptidyl-prolyl CIS-tra 100.0 4.9E-43 1.7E-47 283.1 13.6 121 85-206 31-163 (186)
29 4fru_A Cyclophilin B, peptidyl 100.0 7.7E-43 2.6E-47 282.1 11.6 122 84-206 23-149 (185)
30 3bkp_A Cyclophilin; malaria, i 100.0 2.4E-42 8.2E-47 287.6 14.8 125 79-204 22-163 (232)
31 3k2c_A Peptidyl-prolyl CIS-tra 100.0 2.8E-42 9.7E-47 280.2 14.7 122 84-206 38-164 (193)
32 2c3b_A Ppiase, cyclophilin; is 100.0 2.1E-43 7.1E-48 282.3 6.2 122 84-206 18-146 (172)
33 1z81_A Cyclophilin; structural 100.0 3.9E-42 1.3E-46 285.4 12.2 128 78-206 59-203 (229)
34 2ose_A Probable peptidyl-proly 100.0 9.7E-42 3.3E-46 284.4 12.1 119 85-206 26-181 (234)
35 1ihg_A Cyclophilin 40; ppiase 100.0 1.4E-40 4.6E-45 293.2 15.5 127 79-206 16-160 (370)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 5.5E-40 1.9E-44 288.3 9.5 135 71-206 163-340 (369)
37 2nnz_A Hypothetical protein; b 95.1 0.18 6.3E-06 38.6 9.5 99 80-205 31-139 (153)
38 3kop_A Uncharacterized protein 89.1 1.9 6.6E-05 33.8 8.0 32 79-110 22-55 (188)
39 1zx8_A Hypothetical protein TM 83.7 12 0.00039 27.9 9.8 97 80-205 14-120 (136)
40 2khf_A PLNJ; anti-microbial, b 51.5 3.3 0.00011 21.3 0.1 15 104-118 4-18 (26)
41 2k9u_B Filamin-binding LIM pro 40.0 19 0.00064 18.8 1.9 19 166-184 1-19 (26)
42 2kog_A Vesicle-associated memb 29.2 54 0.0019 23.5 3.7 14 15-28 89-102 (119)
No 1
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=3.9e-47 Score=300.67 Aligned_cols=129 Identities=29% Similarity=0.469 Sum_probs=119.8
Q ss_pred CcEEEEEecceeEEEEEcCCCChHHHHHHHHhhhCCCcCCceEEEeecCeEEEecccCCCCCCccccccccccccCCCCC
Q 047545 78 PGYAIIDTHKGSITVELFKDSSPDVVDEFIDLCQRGRLKGMLFRHIIKHYVIQAGDIDKLGSIEDWTTRGKHYSQLDTSL 157 (206)
Q Consensus 78 ~~~~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~Rv~~~f~iq~Gd~~~~~~~~~~~~~~~~~~~~~~~l 157 (206)
+..++++|+.|+|+||||++.||+||+||++||+.+||||+.||||+++|||||||+.+++.++++.++..+.+|....+
T Consensus 5 ~~~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l 84 (160)
T 2fu0_A 5 PKSAIIYTTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDGTGGESIWGNEFEDEFFDHL 84 (160)
T ss_dssp CCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCBTTB
T ss_pred CCEEEEEecCccEEEEEeCCCChHHHHHHHHHhccCccCCCEEEEEECCCEEEeCCcCCCCCCCCcccCCCccccccCCc
Confidence 34799999999999999999999999999999999999999999999999999999998877777666667777776689
Q ss_pred CCC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 158 KHE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 158 ~h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
+|. +|+|||||++||+++|||||++.++||||++|+|||+|++|||||+
T Consensus 85 ~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~ 134 (160)
T 2fu0_A 85 NHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVL 134 (160)
T ss_dssp CSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred ccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHH
Confidence 997 7999999999999999999999999999999999999999999985
No 2
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=5.9e-47 Score=301.28 Aligned_cols=128 Identities=30% Similarity=0.468 Sum_probs=120.2
Q ss_pred cEEEEEecceeEEEEEcCCCChHHHHHHHHhhhCCCcCCceEEEeecCeEEEecccCCCCCCccccccccccccCCCCCC
Q 047545 79 GYAIIDTHKGSITVELFKDSSPDVVDEFIDLCQRGRLKGMLFRHIIKHYVIQAGDIDKLGSIEDWTTRGKHYSQLDTSLK 158 (206)
Q Consensus 79 ~~~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~Rv~~~f~iq~Gd~~~~~~~~~~~~~~~~~~~~~~~l~ 158 (206)
..|+++|+.|+|+||||++.||+||+||++||+.+||||+.||||+++|||||||+.+++.++.+.++..+.+|..+.++
T Consensus 12 ~~v~l~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~ 91 (166)
T 2x7k_A 12 PNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLK 91 (166)
T ss_dssp SEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCCTTSC
T ss_pred CEEEEEeCCCcEEEEEccCCCCHHHHHHHHHHhcCCCCCCEEEEEECCCEEEcCCCCCCCCCCCccCCCccccccccccC
Confidence 57999999999999999999999999999999999999999999999999999999988877776666677777667899
Q ss_pred CC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 159 HE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 159 h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
|. +|+|||||++||+|+|||||+++++||||++|+|||+|++|||||+
T Consensus 92 h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~ 140 (166)
T 2x7k_A 92 FTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVN 140 (166)
T ss_dssp CCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred CCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHH
Confidence 97 9999999999999999999999999999999999999999999985
No 3
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=8.8e-47 Score=302.73 Aligned_cols=132 Identities=33% Similarity=0.539 Sum_probs=121.4
Q ss_pred CCCCcEEEEEecceeEEEEEcCCCChHHHHHHHHhhhCCCcCCceEEEeecCeEEEecccCCCCCCccccccccccccCC
Q 047545 75 SDLPGYAIIDTHKGSITVELFKDSSPDVVDEFIDLCQRGRLKGMLFRHIIKHYVIQAGDIDKLGSIEDWTTRGKHYSQLD 154 (206)
Q Consensus 75 ~~~~~~~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~Rv~~~f~iq~Gd~~~~~~~~~~~~~~~~~~~~~ 154 (206)
......++++|+.|+|+||||++.||+||+||++||+.+||||+.||||+++|||||||+.+++.++.+.++..+.+|..
T Consensus 18 ~~~~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~ 97 (176)
T 2a2n_A 18 KRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFH 97 (176)
T ss_dssp CCCCSEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCC
T ss_pred CCCCCEEEEEecCccEEEEEeCCCChHHHHHHHHHhhcCccCCCEEEEEECCcEEEccCCCCCCCCCCcccCCccccccc
Confidence 34455899999999999999999999999999999999999999999999999999999998877777666667777766
Q ss_pred CCCCCC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 155 TSLKHE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 155 ~~l~h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
..++|. +|+|||||++||+++|||||++.++||||++|+|||+|++|||||+
T Consensus 98 ~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~ 150 (176)
T 2a2n_A 98 STLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQ 150 (176)
T ss_dssp TTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred cccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHH
Confidence 689997 7999999999999999999999999999999999999999999985
No 4
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=1.3e-46 Score=298.10 Aligned_cols=127 Identities=26% Similarity=0.464 Sum_probs=118.2
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHhhhCCCcCCceEEEeecCeEEEecccCCCCCCccccccccccccCCCCCCC
Q 047545 80 YAIIDTHKGSITVELFKDSSPDVVDEFIDLCQRGRLKGMLFRHIIKHYVIQAGDIDKLGSIEDWTTRGKHYSQLDTSLKH 159 (206)
Q Consensus 80 ~~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~Rv~~~f~iq~Gd~~~~~~~~~~~~~~~~~~~~~~~l~h 159 (206)
.|+++|+.|+|+||||++.||+||+||++||+++||||+.||||+++|||||||+.+++.++++.++..+.+|....++|
T Consensus 2 ~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~h 81 (161)
T 2ok3_A 2 SVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGNSIWGKKFEDEYSEYLKH 81 (161)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCCTTCCS
T ss_pred EEEEEeCCccEEEEEcCCCCcHHHHHHHHHhhhcccCCCEEEEEECCCEEecCCCCCCCCCCCcccCCccccccCcCcCc
Confidence 58899999999999999999999999999999999999999999999999999999888777766666777776678888
Q ss_pred -CceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 160 -EAFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 160 -~~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
.+|+|||||++||+++|||||+++++||||++|+|||+|++|||||+
T Consensus 82 ~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~ 129 (161)
T 2ok3_A 82 NVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLD 129 (161)
T ss_dssp CSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred CCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHH
Confidence 59999999999999999999999999999999999999999999984
No 5
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=3e-46 Score=304.00 Aligned_cols=129 Identities=28% Similarity=0.494 Sum_probs=120.7
Q ss_pred CcEEEEEecceeEEEEEcCCCChHHHHHHHHhhhCCCcCCceEEEeecCeEEEecccCCCCCCccccccccccccCCCCC
Q 047545 78 PGYAIIDTHKGSITVELFKDSSPDVVDEFIDLCQRGRLKGMLFRHIIKHYVIQAGDIDKLGSIEDWTTRGKHYSQLDTSL 157 (206)
Q Consensus 78 ~~~~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~Rv~~~f~iq~Gd~~~~~~~~~~~~~~~~~~~~~~~l 157 (206)
...|+++|+.|+|+||||++.||+||+||++||+.+||||+.||||+++|||||||+++++.++.+.++..+.+|.++.+
T Consensus 19 ~~~v~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~f~iQgGd~~~~g~Gg~si~g~~f~dE~~~~l 98 (197)
T 1zkc_A 19 SGYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFRPNL 98 (197)
T ss_dssp CEEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEECCTTSSSSCCCBTTBSCBCCCCCTTC
T ss_pred CcEEEEEeCCccEEEEEcCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCCEEEcCCCCCCCCCCCccCCCccccccCcCc
Confidence 45799999999999999999999999999999999999999999999999999999998887777666677777767889
Q ss_pred CCC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 158 KHE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 158 ~h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
+|. +|+|||||++||+|+|||||+++++||||++|+|||+|++|||||+
T Consensus 99 ~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~ 148 (197)
T 1zkc_A 99 SHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLT 148 (197)
T ss_dssp CSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred CCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHH
Confidence 996 9999999999999999999999999999999999999999999984
No 6
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=6.4e-46 Score=302.02 Aligned_cols=128 Identities=30% Similarity=0.479 Sum_probs=120.0
Q ss_pred cEEEEEecceeEEEEEcCCCChHHHHHHHHhhhCCCcCCceEEEeecCeEEEecccCCCCCCccccccccccccCCCCCC
Q 047545 79 GYAIIDTHKGSITVELFKDSSPDVVDEFIDLCQRGRLKGMLFRHIIKHYVIQAGDIDKLGSIEDWTTRGKHYSQLDTSLK 158 (206)
Q Consensus 79 ~~~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~Rv~~~f~iq~Gd~~~~~~~~~~~~~~~~~~~~~~~l~ 158 (206)
..|+++|+.|+|+||||++.||+||+||++||+.+||+|+.||||+++|||||||+++++.++.+.++..+.+|....++
T Consensus 39 ~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRVi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~ 118 (196)
T 2b71_A 39 GYITIYTNLGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPNFVIQGGDPTGTGKGGKSIYGEYFEDEINKELK 118 (196)
T ss_dssp CEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEEEETTSSSSCCCBTTBSCBCCCCCTTCC
T ss_pred cEEEEEeCCCCEEEEEeCCCCcHHHHHHHHHhhcCCcCCCEEEEEeCCcEEEcCCCCCCCCCCCccCCCcccccccCCcC
Confidence 47999999999999999999999999999999999999999999999999999999988887776666677777778899
Q ss_pred CC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 159 HE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 159 h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
|. +|+|||||++||+++|||||+++++||||++|+|||+|++|||||+
T Consensus 119 h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~ 167 (196)
T 2b71_A 119 HTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIE 167 (196)
T ss_dssp CCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred cCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHH
Confidence 95 9999999999999999999999999999999999999999999984
No 7
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=7.2e-46 Score=299.58 Aligned_cols=128 Identities=24% Similarity=0.414 Sum_probs=119.0
Q ss_pred cEEEEEecceeEEEEEcCCCChHHHHHHHHhhhCCCcCCceEEEeecCeEEEecccCCCCCCccccccccccccCCCCCC
Q 047545 79 GYAIIDTHKGSITVELFKDSSPDVVDEFIDLCQRGRLKGMLFRHIIKHYVIQAGDIDKLGSIEDWTTRGKHYSQLDTSLK 158 (206)
Q Consensus 79 ~~~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~Rv~~~f~iq~Gd~~~~~~~~~~~~~~~~~~~~~~~l~ 158 (206)
..++++|+.|+|+||||++.||+||+||++||+.+||+|+.||||+++|||||||+++++.++.+.++..+.+|..+.++
T Consensus 17 ~~v~i~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~ 96 (185)
T 2poe_A 17 QGVRIITNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGTGKGGESIYGRYFDDEIYPELK 96 (185)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTEEEEEECTTSEEEEEETTSSSSCCCBTTBSCBCCCCCTTSC
T ss_pred eEEEEEecCccEEEEEeCCCCcHHHHHHHHHhccCCCCCCEEEEEECCCEEEcCCCCCCCCCCCccCCCcccccccCCCc
Confidence 46899999999999999999999999999999999999999999999999999999988877776666667777668899
Q ss_pred CC-ceEEEEecCC----CCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 159 HE-AFMLGTSKAK----HDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 159 h~-~G~vsma~~~----~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
|. +|+|||||++ ||+++|||||+++++||||++|+|||+|++|||||+
T Consensus 97 h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~ 149 (185)
T 2poe_A 97 YDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLN 149 (185)
T ss_dssp CCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred cCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHH
Confidence 95 9999999988 999999999999999999999999999999999985
No 8
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=1.7e-45 Score=300.76 Aligned_cols=129 Identities=31% Similarity=0.484 Sum_probs=120.2
Q ss_pred CcEEEEEecceeEEEEEcCCCChHHHHHHHHhhhCCCcCCceEEEeecCeEEEecccCCCCCCccccccccccccCCCCC
Q 047545 78 PGYAIIDTHKGSITVELFKDSSPDVVDEFIDLCQRGRLKGMLFRHIIKHYVIQAGDIDKLGSIEDWTTRGKHYSQLDTSL 157 (206)
Q Consensus 78 ~~~~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~Rv~~~f~iq~Gd~~~~~~~~~~~~~~~~~~~~~~~l 157 (206)
...|+++|+.|+|+||||++.||+||+||++||+.+||||+.||||+++|||||||+.+++.++.+.++..+.+|..+.+
T Consensus 11 ~~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~F~iQgGd~~~~g~gg~si~g~~f~dE~~~~l 90 (203)
T 2k7n_A 11 PPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDL 90 (203)
T ss_dssp CSEEEEEESSCEEEEEECTTTCTTHHHHHHHHHHHTCGGGCEEEEEETTTEEEEECSSSSSSCCCTTSCSCBCCCCCCSS
T ss_pred CCEEEEEeCCCcEEEEEccCCCcHHHHHHHHHHhcCccCCCEEEEEeCCcEEEcCCCCCCCCCCCccCCCcccccccccc
Confidence 35799999999999999999999999999999999999999999999999999999998887777666667777766789
Q ss_pred CCC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 158 KHE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 158 ~h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
+|. +|+|||||++||+|+|||||++.++||||++|+|||+|++|||||+
T Consensus 91 ~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~ 140 (203)
T 2k7n_A 91 KFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVN 140 (203)
T ss_dssp CCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHH
T ss_pred cCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHH
Confidence 997 9999999999999999999999999999999999999999999985
No 9
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-45 Score=301.78 Aligned_cols=129 Identities=27% Similarity=0.486 Sum_probs=113.6
Q ss_pred CcEEEEEecceeEEEEEcCCCChHHHHHHHHhhhCCCcCCceEEEeecCeEEEec-----ccCCCCCCccccc-------
Q 047545 78 PGYAIIDTHKGSITVELFKDSSPDVVDEFIDLCQRGRLKGMLFRHIIKHYVIQAG-----DIDKLGSIEDWTT------- 145 (206)
Q Consensus 78 ~~~~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~Rv~~~f~iq~G-----d~~~~~~~~~~~~------- 145 (206)
...|+++|+.|+|+||||++.||+||+||++||+.+||+|+.||||+++|||||| |++++|.++.+.+
T Consensus 6 ~~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp~~~g~gg~si~~~~~~~~ 85 (201)
T 3bo7_A 6 KGYLRIVTTQGSLNIELHADMAPRACDSFLRLCAVKYFDDTIFHRCIRNFMIQGGRAELRQPSKKKEVQQSPRSISGFPG 85 (201)
T ss_dssp CEEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEECCGGGCCC-------CCSSCCCSSTT
T ss_pred ceEEEEEeCCCCEEEEEcCCCCcHHHHHHHHHHhcCccCCCEEEEeeCCCEEEcCcccccCCCCCCCCCccccccccccC
Confidence 3579999999999999999999999999999999999999999999999999999 9998877776555
Q ss_pred cccccccCCCCCCCC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 146 RGKHYSQLDTSLKHE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 146 ~~~~~~~~~~~l~h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
+..+.+|..+.++|. +|+|||||++||+++|||||+++++||||++|+|||+|++|||||+
T Consensus 86 g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~ 147 (201)
T 3bo7_A 86 GAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLR 147 (201)
T ss_dssp CCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred CCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHH
Confidence 556667767899995 9999999999999999999999999999999999999999999984
No 10
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=7.7e-45 Score=289.20 Aligned_cols=126 Identities=24% Similarity=0.396 Sum_probs=114.2
Q ss_pred cEEEEEecceeEEEEEcCCCChHHHHHHHHhhhCCCcCCceEEEeecCeEEEecccCCCCCCccccccccccccCCCCCC
Q 047545 79 GYAIIDTHKGSITVELFKDSSPDVVDEFIDLCQRGRLKGMLFRHIIKHYVIQAGDIDKLGSIEDWTTRGKHYSQLDTSLK 158 (206)
Q Consensus 79 ~~~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~Rv~~~f~iq~Gd~~~~~~~~~~~~~~~~~~~~~~~l~ 158 (206)
..|+++|+.|+|+||||++.||+||+||++||+.+||||+.||||+++|||||||+++.+.++. ++..+.+|....++
T Consensus 5 ~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~~~~--~g~~~~dE~~~~l~ 82 (166)
T 1v9t_A 5 PHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKK--PNPPIKNEADNGLR 82 (166)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEESSBCTTCCBCC--CCCCBCCCGGGSCC
T ss_pred eEEEEEeCCccEEEEEcCCCCcHHHHHHHHHhccCCCCCCEEEEEECCcEEEcCCcCcCCCCCC--CCCccccccccccc
Confidence 3799999999999999999999999999999999999999999999999999999987654332 35566677667788
Q ss_pred CCceEEEEecC-CCCCCcceEEEEcCCCCCCCCC-----ccEEEEEEeCccccC
Q 047545 159 HEAFMLGTSKA-KHDNQGFDLYITTAPMPDLSEK-----LIVFGRVIKGEDVVQ 206 (206)
Q Consensus 159 h~~G~vsma~~-~~~s~gSqFfIt~~~~~~Ld~~-----~~VFG~Vi~G~dvl~ 206 (206)
|.+|+|||||+ +||||+|||||++.++||||++ |+|||+|++|||||+
T Consensus 83 ~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~ 136 (166)
T 1v9t_A 83 NTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVAD 136 (166)
T ss_dssp CCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHH
T ss_pred CCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHH
Confidence 99999999995 6999999999999999999998 999999999999985
No 11
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=5e-45 Score=290.60 Aligned_cols=126 Identities=21% Similarity=0.469 Sum_probs=114.7
Q ss_pred cEEEEEecceeEEEEEcCCCChHHHHHHHHhhhCCCcCCceEEEeecCeEEEecccCCCCCCccccccccccccCCCCCC
Q 047545 79 GYAIIDTHKGSITVELFKDSSPDVVDEFIDLCQRGRLKGMLFRHIIKHYVIQAGDIDKLGSIEDWTTRGKHYSQLDTSLK 158 (206)
Q Consensus 79 ~~~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~Rv~~~f~iq~Gd~~~~~~~~~~~~~~~~~~~~~~~l~ 158 (206)
..|+++|+.|+|+||||++.||+||+||++||+.+||||+.||||+++|||||||++.++... .++..+.+|....++
T Consensus 4 ~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~~~--~~~~~~~~E~~~~l~ 81 (167)
T 3s6m_A 4 SMVELHTNHGVIKLELDEAKAPKTVENFLNYVKKGHYDGTIFHRVINGFMIQGGGFEPGLKQK--PTDAPIANEANNGLK 81 (167)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEESSEETTTEEC--CCCCCBCCCGGGCCC
T ss_pred cEEEEEeCCceEEEEEeCCCCcHHHHHHHHHhhhcccCCCEeEEecCCcEEEeccccCCCCCC--CCCCccCCccccccc
Confidence 479999999999999999999999999999999999999999999999999999998664332 235566777777899
Q ss_pred CCceEEEEec-CCCCCCcceEEEEcCCCCCCCCC--------ccEEEEEEeCccccC
Q 047545 159 HEAFMLGTSK-AKHDNQGFDLYITTAPMPDLSEK--------LIVFGRVIKGEDVVQ 206 (206)
Q Consensus 159 h~~G~vsma~-~~~~s~gSqFfIt~~~~~~Ld~~--------~~VFG~Vi~G~dvl~ 206 (206)
|.+|+||||| ++||||+|||||++.+++|||++ |+|||+|++|||||+
T Consensus 82 ~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~ 138 (167)
T 3s6m_A 82 NDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVD 138 (167)
T ss_dssp CCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHH
T ss_pred CCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHH
Confidence 9999999999 68999999999999999999998 999999999999984
No 12
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=9e-45 Score=288.30 Aligned_cols=124 Identities=23% Similarity=0.421 Sum_probs=111.9
Q ss_pred EEEEecceeEEEEEcCCCChHHHHHHHHhhhCCCcCCceEEEeecCeEEEecccCCCCCCccccccccccccCCCCCCCC
Q 047545 81 AIIDTHKGSITVELFKDSSPDVVDEFIDLCQRGRLKGMLFRHIIKHYVIQAGDIDKLGSIEDWTTRGKHYSQLDTSLKHE 160 (206)
Q Consensus 81 ~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~Rv~~~f~iq~Gd~~~~~~~~~~~~~~~~~~~~~~~l~h~ 160 (206)
|+++|+.|+|+||||++.||+||+||++||+.+||||+.||||+++|||||||++... +...++..+.+|....++|.
T Consensus 2 v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~--g~~~~g~~~~dE~~~~l~~~ 79 (164)
T 1lop_A 2 VTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGM--KQKATKEPIKNEANNGLKNT 79 (164)
T ss_dssp EEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEECCEEETTTEEEESSEETTT--EECCCCCCBCCCCCSSCCCC
T ss_pred EEEEeCCCCEEEEEeCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCceEecCCcccCC--CcCCCCCccccccccccccC
Confidence 7899999999999999999999999999999999999999999999999999998432 22234556667766779999
Q ss_pred ceEEEEec-CCCCCCcceEEEEcCCCCCCCCC--------ccEEEEEEeCccccC
Q 047545 161 AFMLGTSK-AKHDNQGFDLYITTAPMPDLSEK--------LIVFGRVIKGEDVVQ 206 (206)
Q Consensus 161 ~G~vsma~-~~~~s~gSqFfIt~~~~~~Ld~~--------~~VFG~Vi~G~dvl~ 206 (206)
+|+||||| ++|||++|||||++++++|||++ |+|||+|++|||||+
T Consensus 80 ~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~ 134 (164)
T 1lop_A 80 RGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVD 134 (164)
T ss_dssp TTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHH
T ss_pred ccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHH
Confidence 99999997 58999999999999999999998 999999999999985
No 13
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=1.4e-44 Score=293.11 Aligned_cols=125 Identities=26% Similarity=0.519 Sum_probs=114.6
Q ss_pred cEEEEEecceeEEEEEcCCCChHHHHHHHHhh---------------hCCCcCCceEEEeecCeEEEecccCCCCCCccc
Q 047545 79 GYAIIDTHKGSITVELFKDSSPDVVDEFIDLC---------------QRGRLKGMLFRHIIKHYVIQAGDIDKLGSIEDW 143 (206)
Q Consensus 79 ~~~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~---------------~~g~Y~g~~f~Rv~~~f~iq~Gd~~~~~~~~~~ 143 (206)
..|+++|+.|+|+||||++.||+||+||++|| +.+||+|+.||||+++|||||||+.+++.++
T Consensus 24 ~~v~l~t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~g~G~gg-- 101 (191)
T 1w74_A 24 ATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGG-- 101 (191)
T ss_dssp EEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTTSSSSCC--
T ss_pred eEEEEEecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCCCCCCCC--
Confidence 47999999999999999999999999999999 4589999999999999999999998776665
Q ss_pred cccccccccCCCCCCCC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEe--CccccC
Q 047545 144 TTRGKHYSQLDTSLKHE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIK--GEDVVQ 206 (206)
Q Consensus 144 ~~~~~~~~~~~~~l~h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~--G~dvl~ 206 (206)
++..+.+|.++.++|. +|+|||||++||+|+|||||++.++||||++|+|||+|++ |||||+
T Consensus 102 -~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~ 166 (191)
T 1w74_A 102 -PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVE 166 (191)
T ss_dssp -SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHH
T ss_pred -CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHH
Confidence 2556666667889996 9999999999999999999999999999999999999999 999984
No 14
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=8.6e-45 Score=290.08 Aligned_cols=126 Identities=32% Similarity=0.511 Sum_probs=113.2
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHhh--hCCC-cCCceEEEeecCeEEEeccc-CCCCCCccccccccccccCCC
Q 047545 80 YAIIDTHKGSITVELFKDSSPDVVDEFIDLC--QRGR-LKGMLFRHIIKHYVIQAGDI-DKLGSIEDWTTRGKHYSQLDT 155 (206)
Q Consensus 80 ~~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~--~~g~-Y~g~~f~Rv~~~f~iq~Gd~-~~~~~~~~~~~~~~~~~~~~~ 155 (206)
+.+.+|+.|+|+||||++.||+||+||++|| +.+| |||+.||||+|+|||||||+ .+++.++.+.++..+.+| ++
T Consensus 18 i~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE-~~ 96 (172)
T 2haq_A 18 VMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTNFDGTGGKSIYGEKFADE-NL 96 (172)
T ss_dssp EEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCCSSSSCBCCC-CC
T ss_pred EEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccCCCCCCCccccCCcccCc-CC
Confidence 4566899999999999999999999999999 6899 99999999999999999995 566666655545555555 78
Q ss_pred CCCCCceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 156 SLKHEAFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 156 ~l~h~~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
.++|.+|+|||||++||+|+|||||+++++||||++|+|||+|++|||||+
T Consensus 97 ~l~h~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~ 147 (172)
T 2haq_A 97 NVKHFVGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVL 147 (172)
T ss_dssp CSCCCTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred CcccCceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHH
Confidence 899999999999999999999999999999999999999999999999985
No 15
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=4.9e-44 Score=286.19 Aligned_cols=122 Identities=28% Similarity=0.421 Sum_probs=108.4
Q ss_pred EecceeEEEEEcCCCChHHHHHHHHhhh--CCC-cCCceEEEeecCeEEEecccC-CCCCCccccccccccccCCCCCCC
Q 047545 84 DTHKGSITVELFKDSSPDVVDEFIDLCQ--RGR-LKGMLFRHIIKHYVIQAGDID-KLGSIEDWTTRGKHYSQLDTSLKH 159 (206)
Q Consensus 84 ~t~~G~i~ieL~~~~aP~t~~nF~~L~~--~g~-Y~g~~f~Rv~~~f~iq~Gd~~-~~~~~~~~~~~~~~~~~~~~~l~h 159 (206)
+|+.|+|+||||++.||+||+||++||+ .+| |||+.||||+++|||||||++ +++.++.+.++..+. +++..++|
T Consensus 22 ~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~-dE~~~l~h 100 (173)
T 2r99_A 22 NKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFD-DENFILKH 100 (173)
T ss_dssp TEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBC-CCCCCSCC
T ss_pred CccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCcCCCCCCCCCccCCCccc-CcccCccc
Confidence 3899999999999999999999999995 687 999999999999999999997 455555444444554 44678899
Q ss_pred C-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 160 E-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 160 ~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
. +|+|||||++||+|+|||||++.++||||++|+|||+|++|||||+
T Consensus 101 ~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~ 148 (173)
T 2r99_A 101 TGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLR 148 (173)
T ss_dssp CSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred CCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHH
Confidence 7 8999999999999999999999999999999999999999999985
No 16
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=2.5e-44 Score=285.93 Aligned_cols=124 Identities=30% Similarity=0.447 Sum_probs=110.2
Q ss_pred EEEecceeEEEEEcCCCChHHHHHHHHhhh--CCC-cCCceEEEeecCeEEEecccC-CCCCCccccccccccccCCCCC
Q 047545 82 IIDTHKGSITVELFKDSSPDVVDEFIDLCQ--RGR-LKGMLFRHIIKHYVIQAGDID-KLGSIEDWTTRGKHYSQLDTSL 157 (206)
Q Consensus 82 ~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~--~g~-Y~g~~f~Rv~~~f~iq~Gd~~-~~~~~~~~~~~~~~~~~~~~~l 157 (206)
+.+|+.|+|+||||++.||+||+||++||+ .+| |+|+.||||+++|||||||++ +++.++.+.++..+.+ +++.+
T Consensus 12 i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~d-E~~~l 90 (165)
T 2z6w_A 12 ANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPD-ENFTL 90 (165)
T ss_dssp ETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCC-CCCCS
T ss_pred ECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCccCCCCCCCCcccCCcccC-ccccc
Confidence 345689999999999999999999999999 899 999999999999999999996 4555554444445544 46789
Q ss_pred CCC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 158 KHE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 158 ~h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
+|. +|+|||||++||+++|||||++.++||||++|+|||+|++|||||+
T Consensus 91 ~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~ 140 (165)
T 2z6w_A 91 KHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVK 140 (165)
T ss_dssp CCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred ccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHH
Confidence 998 7999999999999999999999999999999999999999999985
No 17
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=6.5e-44 Score=285.16 Aligned_cols=121 Identities=28% Similarity=0.433 Sum_probs=108.5
Q ss_pred ecceeEEEEEcCCCChHHHHHHHHhhhC--CC-cCCceEEEeecCeEEEecccC-CCCCCccccccccccccCCCCCCCC
Q 047545 85 THKGSITVELFKDSSPDVVDEFIDLCQR--GR-LKGMLFRHIIKHYVIQAGDID-KLGSIEDWTTRGKHYSQLDTSLKHE 160 (206)
Q Consensus 85 t~~G~i~ieL~~~~aP~t~~nF~~L~~~--g~-Y~g~~f~Rv~~~f~iq~Gd~~-~~~~~~~~~~~~~~~~~~~~~l~h~ 160 (206)
|+.|+|+||||++.||+||+||++||++ +| |||+.||||+++|||||||+. ++|.++.+.++..+.+ +...++|.
T Consensus 22 t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~g~~f~d-E~~~l~h~ 100 (172)
T 2cmt_A 22 GDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDD-ENFQLRHE 100 (172)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCC-CCCCSCCC
T ss_pred eecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCccCCCCCCCCccCCCcccc-cccCcccC
Confidence 8999999999999999999999999984 78 999999999999999999997 4555555444445554 45789997
Q ss_pred -ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 161 -AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 161 -~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
+|+|||||++||+|+|||||++.++||||++|+|||+|++|||||+
T Consensus 101 ~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~ 147 (172)
T 2cmt_A 101 GFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVK 147 (172)
T ss_dssp STTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred CceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHH
Confidence 7999999999999999999999999999999999999999999985
No 18
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=2.9e-44 Score=288.97 Aligned_cols=126 Identities=32% Similarity=0.578 Sum_probs=111.3
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHhhh-----------CCCcCCceEEEeecCeEEEecccC-CCCCCccccccc
Q 047545 80 YAIIDTHKGSITVELFKDSSPDVVDEFIDLCQ-----------RGRLKGMLFRHIIKHYVIQAGDID-KLGSIEDWTTRG 147 (206)
Q Consensus 80 ~~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~-----------~g~Y~g~~f~Rv~~~f~iq~Gd~~-~~~~~~~~~~~~ 147 (206)
+.+.+|+.|+|+||||++.||+||+||++||+ .+||+|+.||||+++|||||||++ +++.++++.++.
T Consensus 16 i~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~ 95 (179)
T 2wfi_A 16 IAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGG 95 (179)
T ss_dssp EEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSSCCCCTTSS
T ss_pred EEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCCCCCCCcccCC
Confidence 45667899999999999999999999999996 569999999999999999999997 555555554444
Q ss_pred cccccCCCCCCCC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 148 KHYSQLDTSLKHE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 148 ~~~~~~~~~l~h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
.+ ++++..++|. +|+|||||++||+|+|||||++.++||||++|+|||+|++|||||+
T Consensus 96 ~f-~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~ 154 (179)
T 2wfi_A 96 FF-EDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVR 154 (179)
T ss_dssp CB-CCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred cc-cccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHH
Confidence 44 4455788897 8999999999999999999999999999999999999999999985
No 19
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=7.4e-44 Score=287.72 Aligned_cols=126 Identities=22% Similarity=0.478 Sum_probs=116.2
Q ss_pred cEEEEEecceeEEEEEcCCCChHHHHHHHHhhhCCCcCCceEEEeecCeEEEecccCCCCCCccccccccccccCCCCCC
Q 047545 79 GYAIIDTHKGSITVELFKDSSPDVVDEFIDLCQRGRLKGMLFRHIIKHYVIQAGDIDKLGSIEDWTTRGKHYSQLDTSLK 158 (206)
Q Consensus 79 ~~~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~Rv~~~f~iq~Gd~~~~~~~~~~~~~~~~~~~~~~~l~ 158 (206)
..|+++|+.|+|+||||++.||+||+||++||+.+||||+.||||+++|||||||+.+++.++...++..+.+|....++
T Consensus 25 ~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~ 104 (185)
T 2hq6_A 25 GKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGAPFKDEFHSRLR 104 (185)
T ss_dssp CEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHTTTTTTEECCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCBTTBC
T ss_pred CEEEEEeCCccEEEEEeCCCCcHHHHHHHHHhhcCccCCCEEEEEECCCEEEcCCCCCCCCCCCcccCCccccccccCcc
Confidence 46999999999999999999999999999999999999999999999999999999988777766666667777666788
Q ss_pred CC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCcccc
Q 047545 159 HE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVV 205 (206)
Q Consensus 159 h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl 205 (206)
|. +|+|||||++||+++|||||+++++|+||++|+|||+|+ ||+++
T Consensus 105 h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~ 151 (185)
T 2hq6_A 105 FNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVY 151 (185)
T ss_dssp SCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHH
T ss_pred cCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeee
Confidence 85 999999999999999999999999999999999999999 98874
No 20
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=7.8e-44 Score=285.98 Aligned_cols=121 Identities=28% Similarity=0.474 Sum_probs=109.2
Q ss_pred ecceeEEEEEcCCCChHHHHHHHHhhhCCC--------cCCceEEEeecCeEEEecccC-CCCCCccccccccccccCCC
Q 047545 85 THKGSITVELFKDSSPDVVDEFIDLCQRGR--------LKGMLFRHIIKHYVIQAGDID-KLGSIEDWTTRGKHYSQLDT 155 (206)
Q Consensus 85 t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~--------Y~g~~f~Rv~~~f~iq~Gd~~-~~~~~~~~~~~~~~~~~~~~ 155 (206)
|+.|+|+||||++.||+||+||++||+++| |+|+.||||+++|||||||+. +++.++.+.++..+.+ +..
T Consensus 22 t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~g~~f~d-E~~ 100 (177)
T 1mzw_A 22 QEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFAD-ENF 100 (177)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTSSSCCCCCTTSSCBCC-CCC
T ss_pred eeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccCCCCCCCccCCCcccC-ccc
Confidence 679999999999999999999999999998 999999999999999999996 5556555544555544 457
Q ss_pred CCCCC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 156 SLKHE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 156 ~l~h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
.++|. +|+|||||++||+|+|||||+++++||||++|+|||+|++|||||+
T Consensus 101 ~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~ 152 (177)
T 1mzw_A 101 KLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMR 152 (177)
T ss_dssp CSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred ccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHH
Confidence 89997 9999999999999999999999999999999999999999999985
No 21
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=5.8e-44 Score=286.80 Aligned_cols=125 Identities=31% Similarity=0.605 Sum_probs=110.0
Q ss_pred EEEEecceeEEEEEcCCCChHHHHHHHHhhhC--------C---CcCCceEEEeecCeEEEecccC-CCCCCcccccccc
Q 047545 81 AIIDTHKGSITVELFKDSSPDVVDEFIDLCQR--------G---RLKGMLFRHIIKHYVIQAGDID-KLGSIEDWTTRGK 148 (206)
Q Consensus 81 ~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~--------g---~Y~g~~f~Rv~~~f~iq~Gd~~-~~~~~~~~~~~~~ 148 (206)
.+.+|+.|+|+||||++.||+||+||++||++ + ||+|+.||||+++|||||||++ +++.++++.++..
T Consensus 14 ~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~ 93 (177)
T 1a58_A 14 TIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGGM 93 (177)
T ss_dssp EETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSSSCCCCTTSSC
T ss_pred EECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCCCCCCcccCCc
Confidence 34567899999999999999999999999985 3 8999999999999999999997 5565555554555
Q ss_pred ccccCCCCCCCC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 149 HYSQLDTSLKHE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 149 ~~~~~~~~l~h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
+.+ +...++|. +|+|||||++||+|+|||||++.++||||++|+|||+|++|||||+
T Consensus 94 f~d-E~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~ 151 (177)
T 1a58_A 94 FDD-EEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVT 151 (177)
T ss_dssp BCC-CCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred ccC-cccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHH
Confidence 544 45678886 9999999999999999999999999999999999999999999985
No 22
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=1.2e-43 Score=284.06 Aligned_cols=122 Identities=31% Similarity=0.499 Sum_probs=108.2
Q ss_pred EecceeEEEEEcCCCChHHHHHHHHhhhC--C--------CcCCceEEEeecCeEEEecccC-CCCCCcccccccccccc
Q 047545 84 DTHKGSITVELFKDSSPDVVDEFIDLCQR--G--------RLKGMLFRHIIKHYVIQAGDID-KLGSIEDWTTRGKHYSQ 152 (206)
Q Consensus 84 ~t~~G~i~ieL~~~~aP~t~~nF~~L~~~--g--------~Y~g~~f~Rv~~~f~iq~Gd~~-~~~~~~~~~~~~~~~~~ 152 (206)
.|+.|+|+||||++.||+||+||++||++ + ||+|+.||||+++|||||||+. ++|.++.+.++..+. +
T Consensus 14 ~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~siyg~~f~-d 92 (173)
T 2igv_A 14 GKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFP-D 92 (173)
T ss_dssp TEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBC-C
T ss_pred CEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCCCCccCCCccc-C
Confidence 45599999999999999999999999987 5 7999999999999999999997 455555544444554 4
Q ss_pred CCCCCCCC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 153 LDTSLKHE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 153 ~~~~l~h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
++..++|. +|+|||||++||+|+|||||++.++||||++|+|||+|++|||||+
T Consensus 93 E~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~ 147 (173)
T 2igv_A 93 ENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVK 147 (173)
T ss_dssp CCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred cccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHH
Confidence 45789998 8999999999999999999999999999999999999999999985
No 23
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.9e-44 Score=289.09 Aligned_cols=126 Identities=32% Similarity=0.540 Sum_probs=111.3
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHhhh-----------CCCcCCceEEEeecCeEEEecccC-CCCCCccccccc
Q 047545 80 YAIIDTHKGSITVELFKDSSPDVVDEFIDLCQ-----------RGRLKGMLFRHIIKHYVIQAGDID-KLGSIEDWTTRG 147 (206)
Q Consensus 80 ~~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~-----------~g~Y~g~~f~Rv~~~f~iq~Gd~~-~~~~~~~~~~~~ 147 (206)
+.+.+|+.|+|+||||++.||+||+||++||+ .+||+|+.||||+++|||||||++ +++.++++.++.
T Consensus 26 i~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~G~gg~siyg~ 105 (192)
T 2he9_A 26 IEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGG 105 (192)
T ss_dssp EEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSSCCCCTTSS
T ss_pred EEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCCCCCCCcccCC
Confidence 45668999999999999999999999999995 579999999999999999999997 555555554444
Q ss_pred cccccCCCCCCCC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 148 KHYSQLDTSLKHE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 148 ~~~~~~~~~l~h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
.+. +++..++|. +|+|||||++||+|+||||||+.++||||++|+|||+|++|||||+
T Consensus 106 ~f~-dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~ 164 (192)
T 2he9_A 106 YFK-DENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIE 164 (192)
T ss_dssp CBC-CCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred ccc-CccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHH
Confidence 444 455788897 8999999999999999999999999999999999999999999985
No 24
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=1.3e-43 Score=283.12 Aligned_cols=122 Identities=31% Similarity=0.525 Sum_probs=108.2
Q ss_pred EecceeEEEEEcCCCChHHHHHHHHhhh-CCC--------cCCceEEEeecCeEEEecccC-CCCCCccccccccccccC
Q 047545 84 DTHKGSITVELFKDSSPDVVDEFIDLCQ-RGR--------LKGMLFRHIIKHYVIQAGDID-KLGSIEDWTTRGKHYSQL 153 (206)
Q Consensus 84 ~t~~G~i~ieL~~~~aP~t~~nF~~L~~-~g~--------Y~g~~f~Rv~~~f~iq~Gd~~-~~~~~~~~~~~~~~~~~~ 153 (206)
.|+.|+|+||||++.||+||+||++||+ .+| |+|+.||||+++|||||||+. +++.++.+.++..+. ++
T Consensus 14 ~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~-dE 92 (170)
T 1qng_A 14 NSNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGGESIYGRSFT-DE 92 (170)
T ss_dssp SSEEEEEEEEECTTTCHHHHHHHHHHHHTCEECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBC-CC
T ss_pred CEeceeEEEEEcCCCCCHHHHHHHHHhccCCcCccCccceECCCEEEEEECCCEEEcCCccCCCCCCCccccCCccc-cc
Confidence 3459999999999999999999999998 488 999999999999999999997 555555544444454 44
Q ss_pred CCCCCCC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 154 DTSLKHE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 154 ~~~l~h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
...++|. +|+|||||++||+|+|||||++.++||||++|+|||+|++|||||+
T Consensus 93 ~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~ 146 (170)
T 1qng_A 93 NFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVR 146 (170)
T ss_dssp CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred ccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHH
Confidence 6789997 8999999999999999999999999999999999999999999985
No 25
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=1e-43 Score=282.24 Aligned_cols=125 Identities=29% Similarity=0.498 Sum_probs=110.9
Q ss_pred EEEEecceeEEEEEcCCCChHHHHHHHHhhh--CCC-cCCceEEEeecCeEEEeccc-CCCCCCccccccccccccCCCC
Q 047545 81 AIIDTHKGSITVELFKDSSPDVVDEFIDLCQ--RGR-LKGMLFRHIIKHYVIQAGDI-DKLGSIEDWTTRGKHYSQLDTS 156 (206)
Q Consensus 81 ~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~--~g~-Y~g~~f~Rv~~~f~iq~Gd~-~~~~~~~~~~~~~~~~~~~~~~ 156 (206)
.+..|+.|+|+||||++.||+||+||++||+ .+| |+|+.||||+++|||||||+ .+++.++.+.++..+. +++..
T Consensus 10 ~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~~~-dE~~~ 88 (164)
T 3pmp_A 10 SINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTRHNGTGGKSIYGEKFA-DENFQ 88 (164)
T ss_dssp EETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBC-CCCCC
T ss_pred EECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCCCCCCCCCCCcccCCcccc-ccccc
Confidence 4445999999999999999999999999999 888 99999999999999999995 4556655555455444 44778
Q ss_pred CCCC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 157 LKHE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 157 l~h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
++|. +|+|||||++||+++|||||+++++||||++|+|||+|++|||||+
T Consensus 89 l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~ 139 (164)
T 3pmp_A 89 VKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVR 139 (164)
T ss_dssp SCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred cCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHH
Confidence 9998 6999999999999999999999999999999999999999999985
No 26
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=7.8e-44 Score=288.32 Aligned_cols=122 Identities=30% Similarity=0.485 Sum_probs=109.4
Q ss_pred EecceeEEEEEcCCCChHHHHHHHHhhh--CCC-cCCceEEEeecCeEEEecc-cCCCCCCccccccccccccCCCCCCC
Q 047545 84 DTHKGSITVELFKDSSPDVVDEFIDLCQ--RGR-LKGMLFRHIIKHYVIQAGD-IDKLGSIEDWTTRGKHYSQLDTSLKH 159 (206)
Q Consensus 84 ~t~~G~i~ieL~~~~aP~t~~nF~~L~~--~g~-Y~g~~f~Rv~~~f~iq~Gd-~~~~~~~~~~~~~~~~~~~~~~~l~h 159 (206)
+|+.|+|+||||++.||+||+||++||+ .+| |+|+.||||+++||||||| +.+++.++.+.++..+.+| +..++|
T Consensus 26 ~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE-~~~l~h 104 (188)
T 3ich_A 26 DEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDE-NFKLKH 104 (188)
T ss_dssp TEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCC-CCCSCC
T ss_pred CEeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccCCCCCCCccccCCccccc-ccCccc
Confidence 4899999999999999999999999995 689 9999999999999999999 4566666655445555555 678888
Q ss_pred C-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 160 E-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 160 ~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
. +|+|||||++||+|+|||||+++++||||++|+|||+|++|||||+
T Consensus 105 ~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~ 152 (188)
T 3ich_A 105 YGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVR 152 (188)
T ss_dssp CSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred CCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHH
Confidence 6 9999999999999999999999999999999999999999999985
No 27
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=5e-43 Score=282.83 Aligned_cols=126 Identities=29% Similarity=0.471 Sum_probs=109.9
Q ss_pred EEEEEec-----ceeEEEEEcCCCChHHHHHHHHhhhCCC---cCCceEEEeecCeEEEecccC-CCCCCcccccccccc
Q 047545 80 YAIIDTH-----KGSITVELFKDSSPDVVDEFIDLCQRGR---LKGMLFRHIIKHYVIQAGDID-KLGSIEDWTTRGKHY 150 (206)
Q Consensus 80 ~~~~~t~-----~G~i~ieL~~~~aP~t~~nF~~L~~~g~---Y~g~~f~Rv~~~f~iq~Gd~~-~~~~~~~~~~~~~~~ 150 (206)
.|.++++ .|+|+||||++.||+||+||++||++++ |||+.||||+++|||||||+. +++.++.+.+ +..+
T Consensus 24 ~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~-g~~~ 102 (184)
T 3rdd_A 24 TVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIY-GEKF 102 (184)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBTT-BSCB
T ss_pred EEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCCCCCCCCCcccC-CCcc
Confidence 5677765 9999999999999999999999997655 999999999999999999965 4455554444 4444
Q ss_pred ccCCCCCCCC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 151 SQLDTSLKHE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 151 ~~~~~~l~h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
++++..++|. +|+|||||++||+++|||||+++++|+||++|+|||+|++|||||+
T Consensus 103 ~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~ 159 (184)
T 3rdd_A 103 EDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVE 159 (184)
T ss_dssp CCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred cCcccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHH
Confidence 5556788897 9999999999999999999999999999999999999999999985
No 28
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=4.9e-43 Score=283.11 Aligned_cols=121 Identities=35% Similarity=0.607 Sum_probs=107.3
Q ss_pred ecceeEEEEEcCCCChHHHHHHHHhhh--CCC--------cCCceEEEeecCeEEEecccC-CCCCCccccccccccccC
Q 047545 85 THKGSITVELFKDSSPDVVDEFIDLCQ--RGR--------LKGMLFRHIIKHYVIQAGDID-KLGSIEDWTTRGKHYSQL 153 (206)
Q Consensus 85 t~~G~i~ieL~~~~aP~t~~nF~~L~~--~g~--------Y~g~~f~Rv~~~f~iq~Gd~~-~~~~~~~~~~~~~~~~~~ 153 (206)
|+.|+|+||||++.||+||+||++||+ .+| |||+.||||+++|||||||+. ++|.++.+.++..+. ++
T Consensus 31 t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G~gg~si~g~~f~-dE 109 (186)
T 2poy_A 31 TPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDGTGGESIYGSKFR-DE 109 (186)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCCCCTTC-CBC-CC
T ss_pred EecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCCCCCCCccCCCccc-Cc
Confidence 459999999999999999999999996 578 999999999999999999997 455555544444454 45
Q ss_pred CCCCCCC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 154 DTSLKHE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 154 ~~~l~h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
...++|. +|+|||||++||+|+|||||++.++||||++|+|||+|++|||||+
T Consensus 110 ~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~ 163 (186)
T 2poy_A 110 NFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVK 163 (186)
T ss_dssp CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred ccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHH
Confidence 6789998 8999999999999999999999999999999999999999999985
No 29
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=7.7e-43 Score=282.09 Aligned_cols=122 Identities=30% Similarity=0.492 Sum_probs=107.4
Q ss_pred EecceeEEEEEcCCCChHHHHHHHHhhhC--C-CcCCceEEEeecCeEEEecccC-CCCCCccccccccccccCCCCCCC
Q 047545 84 DTHKGSITVELFKDSSPDVVDEFIDLCQR--G-RLKGMLFRHIIKHYVIQAGDID-KLGSIEDWTTRGKHYSQLDTSLKH 159 (206)
Q Consensus 84 ~t~~G~i~ieL~~~~aP~t~~nF~~L~~~--g-~Y~g~~f~Rv~~~f~iq~Gd~~-~~~~~~~~~~~~~~~~~~~~~l~h 159 (206)
.|+.|+|+||||++.||+||+||++||++ | ||+|+.||||+++|||||||++ +++.++.+.++..+ ++++..++|
T Consensus 23 ~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f-~de~~~~~h 101 (185)
T 4fru_A 23 DEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERF-PDENFKLKH 101 (185)
T ss_dssp TEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCB-CCCCCCSCC
T ss_pred CEecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCCCCCCCCccccCCcc-CccccccCc
Confidence 46699999999999999999999999976 5 7999999999999999999998 44555544444444 445678888
Q ss_pred C-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 160 E-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 160 ~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
. +|+|||||++||+|+|||||+++++||||++|+|||+|++|||||+
T Consensus 102 ~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~ 149 (185)
T 4fru_A 102 YGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVR 149 (185)
T ss_dssp CSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred CCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHH
Confidence 6 9999999999999999999999999999999999999999999984
No 30
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.4e-42 Score=287.56 Aligned_cols=125 Identities=25% Similarity=0.446 Sum_probs=113.1
Q ss_pred cEEEEEecceeEEEEEcCCCChHHHHHHHHhhhCCCcCCceEEEeecCeEEEecccCCCCCCccccc--cccccccCCCC
Q 047545 79 GYAIIDTHKGSITVELFKDSSPDVVDEFIDLCQRGRLKGMLFRHIIKHYVIQAGDIDKLGSIEDWTT--RGKHYSQLDTS 156 (206)
Q Consensus 79 ~~~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~Rv~~~f~iq~Gd~~~~~~~~~~~~--~~~~~~~~~~~ 156 (206)
..|+++|+.|+|+||||++.||+||+||++||+.+||+|+.||||+++|||||||++++|.++...+ +..+.+|....
T Consensus 22 ~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydgt~FhRVi~~FmiQgGdp~~~G~Gg~si~~~g~~f~dE~~~~ 101 (232)
T 3bkp_A 22 GKVVLHTSLGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVKDFIVQGGDPTGTGRGGADTTFDGKPFDVETHPR 101 (232)
T ss_dssp CEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHHTTTTTCBEEEEETTTEEEECCTTSSSSCCCCCTTTTCCBCCCCCTT
T ss_pred CEEEEEECCCcEEEEEcCCCCcHHHHHHHHHhhcCccCCCEEEEEeCCCEEEcCCCCCCCCCCCccccCCCccCCccccC
Confidence 4699999999999999999999999999999999999999999999999999999998887776655 55666776678
Q ss_pred CCCC-ceEEEEecCCC--------------CCCcceEEEEcCCCCCCCCCccEEEEEEeCccc
Q 047545 157 LKHE-AFMLGTSKAKH--------------DNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDV 204 (206)
Q Consensus 157 l~h~-~G~vsma~~~~--------------~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dv 204 (206)
++|. +|+|||||+++ |+|+||||||++++||||++|+|||+|+ ||+|
T Consensus 102 l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~v 163 (232)
T 3bkp_A 102 LKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHTL 163 (232)
T ss_dssp CCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGH
T ss_pred cCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCch
Confidence 9886 99999999887 6999999999999999999999999999 8876
No 31
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=2.8e-42 Score=280.24 Aligned_cols=122 Identities=30% Similarity=0.488 Sum_probs=107.9
Q ss_pred EecceeEEEEEcCCCChHHHHHHHHhhh--CCC-cCCceEEEeecCeEEEecccC-CCCCCccccccccccccCCCCCCC
Q 047545 84 DTHKGSITVELFKDSSPDVVDEFIDLCQ--RGR-LKGMLFRHIIKHYVIQAGDID-KLGSIEDWTTRGKHYSQLDTSLKH 159 (206)
Q Consensus 84 ~t~~G~i~ieL~~~~aP~t~~nF~~L~~--~g~-Y~g~~f~Rv~~~f~iq~Gd~~-~~~~~~~~~~~~~~~~~~~~~l~h 159 (206)
+|+.|+|+||||++.||+||+||++||+ .+| |+|+.||||+++|||||||+. +.+.++.+.++..+ +++++.++|
T Consensus 38 ~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f-~dE~~~l~h 116 (193)
T 3k2c_A 38 EESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKF-PDENFELKH 116 (193)
T ss_dssp TEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECCTTTSSSSCCCCTTSSCB-CCCCCCSCC
T ss_pred CEEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCCCCCCCCcCCcccCCCcc-ccccccccc
Confidence 4889999999999999999999999999 677 999999999999999999965 45555544444444 445778888
Q ss_pred C-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 160 E-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 160 ~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
. +|+|||||++||+++|||||+++++||||++|+|||+|++|||||+
T Consensus 117 ~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~ 164 (193)
T 3k2c_A 117 TKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVH 164 (193)
T ss_dssp CSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred CCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHH
Confidence 6 9999999999999999999999999999999999999999999985
No 32
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=2.1e-43 Score=282.31 Aligned_cols=122 Identities=30% Similarity=0.470 Sum_probs=88.1
Q ss_pred EecceeEEEEEcCCCChHHHHHHHHhhh--CCC-cCCceEEEeecCeEEEecc-cCCCCCCccccccccccccCCCCCCC
Q 047545 84 DTHKGSITVELFKDSSPDVVDEFIDLCQ--RGR-LKGMLFRHIIKHYVIQAGD-IDKLGSIEDWTTRGKHYSQLDTSLKH 159 (206)
Q Consensus 84 ~t~~G~i~ieL~~~~aP~t~~nF~~L~~--~g~-Y~g~~f~Rv~~~f~iq~Gd-~~~~~~~~~~~~~~~~~~~~~~~l~h 159 (206)
.|+.|+|+||||++.||+||+||++||+ .+| |+|+.||||+++||||||| +.+++.++.+.++..+.+| +..++|
T Consensus 18 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE-~~~~~h 96 (172)
T 2c3b_A 18 ETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRGNGTGGRSIYGDKFADE-NFSRKH 96 (172)
T ss_dssp CCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC-----------------------CHHH
T ss_pred ecccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCCCCCCCCcccCCCcccCc-cccccc
Confidence 4889999999999999999999999999 678 9999999999999999999 6677666665555555555 677788
Q ss_pred C-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEe--CccccC
Q 047545 160 E-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIK--GEDVVQ 206 (206)
Q Consensus 160 ~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~--G~dvl~ 206 (206)
. +|+|||||++||+|+|||||++.++||||++|+|||+|++ |||||+
T Consensus 97 ~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~ 146 (172)
T 2c3b_A 97 DKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVK 146 (172)
T ss_dssp HHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHH
T ss_pred CCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHH
Confidence 6 9999999999999999999999999999999999999999 999985
No 33
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=3.9e-42 Score=285.39 Aligned_cols=128 Identities=26% Similarity=0.415 Sum_probs=112.3
Q ss_pred CcEEEEEe-----cceeEEEEEcCCCChHHHHHHHHhhhCC--------CcCCceEEEeecCeEEEecccC-CCCCCccc
Q 047545 78 PGYAIIDT-----HKGSITVELFKDSSPDVVDEFIDLCQRG--------RLKGMLFRHIIKHYVIQAGDID-KLGSIEDW 143 (206)
Q Consensus 78 ~~~~~~~t-----~~G~i~ieL~~~~aP~t~~nF~~L~~~g--------~Y~g~~f~Rv~~~f~iq~Gd~~-~~~~~~~~ 143 (206)
...|.+++ +.|+|+||||++.||+||+||++||+++ ||+|+.||||+++|||||||++ +++.++..
T Consensus 59 ~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~Gg~s 138 (229)
T 1z81_A 59 NPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNGSGSLS 138 (229)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECCTTTSSSCCCCB
T ss_pred CcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCCCcCCCCCCCCc
Confidence 34677765 4999999999999999999999999987 7999999999999999999996 55555554
Q ss_pred cccccccccCCCCCCCC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEE--eCccccC
Q 047545 144 TTRGKHYSQLDTSLKHE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVI--KGEDVVQ 206 (206)
Q Consensus 144 ~~~~~~~~~~~~~l~h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi--~G~dvl~ 206 (206)
.++..+.+ +...++|. +|+|||||++||+|+|||||++.++||||++|+|||+|+ +|||||+
T Consensus 139 iyg~~f~d-E~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~ 203 (229)
T 1z81_A 139 IYGEKFDD-ENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLK 203 (229)
T ss_dssp TTBSCCCC-CCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHH
T ss_pred cCCCcccc-cccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHH
Confidence 44445544 46789996 999999999999999999999999999999999999999 9999985
No 34
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=9.7e-42 Score=284.37 Aligned_cols=119 Identities=25% Similarity=0.386 Sum_probs=103.1
Q ss_pred ecceeEEEEEcCCCChHHHHHHHHhhhC-----------------C--C-cCCceEEEeecCeEEEeccc-CCCCCCccc
Q 047545 85 THKGSITVELFKDSSPDVVDEFIDLCQR-----------------G--R-LKGMLFRHIIKHYVIQAGDI-DKLGSIEDW 143 (206)
Q Consensus 85 t~~G~i~ieL~~~~aP~t~~nF~~L~~~-----------------g--~-Y~g~~f~Rv~~~f~iq~Gd~-~~~~~~~~~ 143 (206)
|+.|+|+||||++.||+||+||++||++ | | |+|+.||||+++|||||||+ .++|.++.+
T Consensus 26 t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQgGd~~~g~G~Gg~s 105 (234)
T 2ose_A 26 EIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIVSGDIYNSNGSSAGT 105 (234)
T ss_dssp EEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEEECCCC----CCCCC
T ss_pred cccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEEcCCccCCCCCCCcc
Confidence 9999999999999999999999999994 4 7 99999999999999999995 566666654
Q ss_pred ccccc-----ccccCCCCCCCC-ceEEEEec----CCCCCCcceEEEEcCC------CCCCCCCccEEEEEEeCccccC
Q 047545 144 TTRGK-----HYSQLDTSLKHE-AFMLGTSK----AKHDNQGFDLYITTAP------MPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 144 ~~~~~-----~~~~~~~~l~h~-~G~vsma~----~~~~s~gSqFfIt~~~------~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
.++.. |. ++.++|. +|+||||| ++||+|+|||||++++ +||||++|+|||+|++|||||+
T Consensus 106 iyg~~~~p~~f~---~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~tVFG~Vv~GmdVv~ 181 (234)
T 2ose_A 106 VYCDEPIPPVFG---DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVVIGQVYGGLDVLD 181 (234)
T ss_dssp TTTTCCBCCCCC---SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSEEEEEEEECHHHHH
T ss_pred ccCCccCccccc---CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCeeEEEEEeCCHHHHH
Confidence 44443 33 4589996 99999999 9999999999999999 8999999999999999999985
No 35
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=1.4e-40 Score=293.19 Aligned_cols=127 Identities=35% Similarity=0.579 Sum_probs=112.8
Q ss_pred cEEEEEec-----ceeEEEEEcCCCChHHHHHHHHhhhC--------C---CcCCceEEEeecCeEEEecccC-CCCCCc
Q 047545 79 GYAIIDTH-----KGSITVELFKDSSPDVVDEFIDLCQR--------G---RLKGMLFRHIIKHYVIQAGDID-KLGSIE 141 (206)
Q Consensus 79 ~~~~~~t~-----~G~i~ieL~~~~aP~t~~nF~~L~~~--------g---~Y~g~~f~Rv~~~f~iq~Gd~~-~~~~~~ 141 (206)
..|.++++ .|+|+||||++.||+||+||+.||++ | ||+|+.||||+|+|||||||++ ++|+++
T Consensus 16 ~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g~ 95 (370)
T 1ihg_A 16 PRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGG 95 (370)
T ss_dssp CEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSCC
T ss_pred CeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCCC
Confidence 35777766 89999999999999999999999997 6 7999999999999999999998 666666
Q ss_pred cccccccccccCCCCCCCC-ceEEEEecCCCCCCcceEEEEcCCCCCCCCCccEEEEEEeCccccC
Q 047545 142 DWTTRGKHYSQLDTSLKHE-AFMLGTSKAKHDNQGFDLYITTAPMPDLSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 142 ~~~~~~~~~~~~~~~l~h~-~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~~~~VFG~Vi~G~dvl~ 206 (206)
.+.++..+.+ +...++|. +|+|||||++|||||||||||++++||||++|+|||+|++||+||+
T Consensus 96 ~~~~~~~~~~-e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~ 160 (370)
T 1ihg_A 96 ESIYGEKFED-ENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAK 160 (370)
T ss_dssp CBTTBSCBCC-CCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHH
T ss_pred CCCCCCCcCC-CcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHH
Confidence 6555555554 45688885 9999999999999999999999999999999999999999999974
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=5.5e-40 Score=288.28 Aligned_cols=135 Identities=16% Similarity=0.188 Sum_probs=110.0
Q ss_pred cCCCCCCCcEEEEEec--------ceeEEEEEcCCCChHHHHHHHHhhhCCCcCCceEEEeecCeEEEecccCCCCCCcc
Q 047545 71 DSKKSDLPGYAIIDTH--------KGSITVELFKDSSPDVVDEFIDLCQRGRLKGMLFRHIIKHYVIQAGDIDKLGSIED 142 (206)
Q Consensus 71 ~~~~~~~~~~~~~~t~--------~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~Rv~~~f~iq~Gd~~~~~~~~~ 142 (206)
..+.......+.+.|+ .|+|+|+||++.||+||+||++||+.+||||+.|||| ++|||||||+++++.+..
T Consensus 163 ~~P~l~gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~GfYdGt~FHRV-~gFmIQgGDp~g~G~G~~ 241 (369)
T 3rfy_A 163 NMPLLKGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERHFYDGMEIQRS-DGFVVQTGDPEGPAEGFI 241 (369)
T ss_dssp TSCEECSEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHTTTTTTEECEEE-EEEEECCCCCCCCCSCCC
T ss_pred cCccCCCCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhcCCcCCCeeeee-CCeeEecCCCCCCCCCcc
Confidence 3334444557888887 9999999999999999999999999999999999999 999999999997665410
Q ss_pred --------------------ccccccccccC-----CCCCCC-CceEEEEecC--CCCCCcceEEEEc-------CCCCC
Q 047545 143 --------------------WTTRGKHYSQL-----DTSLKH-EAFMLGTSKA--KHDNQGFDLYITT-------APMPD 187 (206)
Q Consensus 143 --------------------~~~~~~~~~~~-----~~~l~h-~~G~vsma~~--~~~s~gSqFfIt~-------~~~~~ 187 (206)
.++++..++++ .+.++| .+|+|||||+ +|||++|||||++ ++.+|
T Consensus 242 ~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~~~~ 321 (369)
T 3rfy_A 242 DPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNSNI 321 (369)
T ss_dssp SCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCCCSS
T ss_pred CcccCcCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCCCCcc
Confidence 11112222222 235665 5999999997 8999999999999 46899
Q ss_pred CCCCccEEEEEEeCccccC
Q 047545 188 LSEKLIVFGRVIKGEDVVQ 206 (206)
Q Consensus 188 Ld~~~~VFG~Vi~G~dvl~ 206 (206)
||++|+|||+|++|||||+
T Consensus 322 LDgkytVFG~VveGmdVVd 340 (369)
T 3rfy_A 322 LDGRYAVFGYVTDNEDFLA 340 (369)
T ss_dssp SCSCEEEEEEEEESTTGGG
T ss_pred cCCCeeEEEEEecCHHHHH
Confidence 9999999999999999985
No 37
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=95.08 E-value=0.18 Score=38.63 Aligned_cols=99 Identities=13% Similarity=0.119 Sum_probs=59.3
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHhhhC----CCcCCceEEEeecCeEEEecccCCCCCCccccccccccccCCC
Q 047545 80 YAIIDTHKGSITVELFKDSSPDVVDEFIDLCQR----GRLKGMLFRHIIKHYVIQAGDIDKLGSIEDWTTRGKHYSQLDT 155 (206)
Q Consensus 80 ~~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~----g~Y~g~~f~Rv~~~f~iq~Gd~~~~~~~~~~~~~~~~~~~~~~ 155 (206)
.+.+.-....++++|+.+.||+|++.|+++.-- ..|-+-.++.+ | .....+++.
T Consensus 31 ~I~i~~~~~~~~a~L~D~~aP~Ta~~f~~~LPl~~~~~~~g~E~y~~l-p---------------------~~l~~~en~ 88 (153)
T 2nnz_A 31 RLRIRFESAECEVELYEEWAPETVRAIADALPIKSTANRWGDEIYFTT-Q---------------------VAVEKEENS 88 (153)
T ss_dssp CEEEEETTEEEEECCCTTSCHHHHHHHHHTCSEEEEEEEETTEEEECC-S---------------------CCCCCSSCC
T ss_pred EEEEEECCEEEEEEEcCCCCHHHHHHHHHhCCcEEEHHhhCCcEEEEC-C---------------------CCCCCCCCC
Confidence 466666778999999999999999999997621 01211111111 1 011111112
Q ss_pred CCCCCceEEEEecCCCCCCcceEEEEcCCCCCCCC------CccEEEEEEeCcccc
Q 047545 156 SLKHEAFMLGTSKAKHDNQGFDLYITTAPMPDLSE------KLIVFGRVIKGEDVV 205 (206)
Q Consensus 156 ~l~h~~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~------~~~VFG~Vi~G~dvl 205 (206)
...-..|-|++--.+. .+-|-+++.|...+ .-.+||+|.+|+|.|
T Consensus 89 ~~~~~~GDI~Yy~pg~-----~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L 139 (153)
T 2nnz_A 89 KDVVELGDVAYWIPGK-----AICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGL 139 (153)
T ss_dssp BCCCCTTEEEEETTTT-----EEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCG
T ss_pred cccCCCCeEEEeCCCC-----EEEEEECCccccccccccccccEEEEEEccCHHHH
Confidence 2223467777765432 37777888753322 347899999998876
No 38
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=89.07 E-value=1.9 Score=33.83 Aligned_cols=32 Identities=22% Similarity=0.259 Sum_probs=24.1
Q ss_pred cEEEEEecce--eEEEEEcCCCChHHHHHHHHhh
Q 047545 79 GYAIIDTHKG--SITVELFKDSSPDVVDEFIDLC 110 (206)
Q Consensus 79 ~~~~~~t~~G--~i~ieL~~~~aP~t~~nF~~L~ 110 (206)
+.+.+.-..+ .++.+|..+.||+||+.|.++.
T Consensus 22 r~i~itl~~~g~~~~A~Lldd~APkTcaA~~~~L 55 (188)
T 3kop_A 22 RYINITLEKRGVTCKALLLDDVAPRTSKAVWDAL 55 (188)
T ss_dssp CEEEEEETTTTEEEEEEECTTTSHHHHHHHHHHC
T ss_pred eEEEEEEecCCeEEEEEEccccChHHHHHHHHhC
Confidence 3444444444 4788999999999999999975
No 39
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=83.68 E-value=12 Score=27.91 Aligned_cols=97 Identities=12% Similarity=0.054 Sum_probs=56.2
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHhhh----CCCcCCceEEEeecCeEEEecccCCCCCCccccccccccccCCC
Q 047545 80 YAIIDTHKGSITVELFKDSSPDVVDEFIDLCQ----RGRLKGMLFRHIIKHYVIQAGDIDKLGSIEDWTTRGKHYSQLDT 155 (206)
Q Consensus 80 ~~~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~----~g~Y~g~~f~Rv~~~f~iq~Gd~~~~~~~~~~~~~~~~~~~~~~ 155 (206)
.+.+-.....++.+|+.+ |.|++.|.+..- -..|. ..++=-.|-.. ..+++.
T Consensus 14 ~~~~~~~~~~v~a~L~Dn--p~Ta~~~~~~LPl~~~~~~~g-~E~y~~~p~~l---------------------~~~e~~ 69 (136)
T 1zx8_A 14 RVELLFESGKCVIDLNEE--YEVVKLLKEKIPFESVVNTWG-EEIYFSTPVNV---------------------QKMENP 69 (136)
T ss_dssp EEEEECSSCEEEEEEETT--SHHHHHHHHHCSEEEECEESS-SEEEEECSCCC---------------------CCCSSE
T ss_pred EEEEeeCCcEEEEEEcCC--HHHHHHHHHHCCcEEEHHHhC-CcEEEECCccC---------------------CCCCCC
Confidence 345555667899999755 889999998762 12243 33322222111 101111
Q ss_pred CCCCCceEEEEecCCCCCCcceEEEEcCCCCCCCC------CccEEEEEEeCcccc
Q 047545 156 SLKHEAFMLGTSKAKHDNQGFDLYITTAPMPDLSE------KLIVFGRVIKGEDVV 205 (206)
Q Consensus 156 ~l~h~~G~vsma~~~~~s~gSqFfIt~~~~~~Ld~------~~~VFG~Vi~G~dvl 205 (206)
......|-|+.--.+ .-|-|-+++.|...+ .-.+||+|.+|++.+
T Consensus 70 ~~~~~~GDIaYw~pg-----g~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l 120 (136)
T 1zx8_A 70 REVVEIGDVGYWPPG-----KALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDL 120 (136)
T ss_dssp ESSBCTTEEEEEGGG-----TEEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGG
T ss_pred CccCCCCcEEEeCCC-----CEEEEEeCCCccccCccccCcCcEEEEEEccCHHHH
Confidence 222345777665433 247777777754433 368999999999876
No 40
>2khf_A PLNJ; anti-microbial, bacteriocin, peptide, two-peptide, antimicrobial protein; NMR {Lactobacillus plantarum} PDB: 2khg_A
Probab=51.53 E-value=3.3 Score=21.27 Aligned_cols=15 Identities=20% Similarity=0.361 Sum_probs=13.0
Q ss_pred HHHHHhhhCCCcCCc
Q 047545 104 DEFIDLCQRGRLKGM 118 (206)
Q Consensus 104 ~nF~~L~~~g~Y~g~ 118 (206)
.||.+-.+.|||||-
T Consensus 4 knfwsslrkgfydge 18 (26)
T 2khf_A 4 KNFWSSLRKGFYDGE 18 (26)
T ss_dssp HHHHHHHHHHHTTTH
T ss_pred HHHHHHHHhhcccch
Confidence 689998999999984
No 41
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=40.01 E-value=19 Score=18.82 Aligned_cols=19 Identities=21% Similarity=0.345 Sum_probs=12.6
Q ss_pred EecCCCCCCcceEEEEcCC
Q 047545 166 TSKAKHDNQGFDLYITTAP 184 (206)
Q Consensus 166 ma~~~~~s~gSqFfIt~~~ 184 (206)
||+.....-.|..||||.+
T Consensus 1 ma~kpeKR~aSSvFITLap 19 (26)
T 2k9u_B 1 MASKPEKRVASSVFITLAP 19 (26)
T ss_dssp CCCCSSSSCEEEEEEEECC
T ss_pred CCCcchhheeeeEEEEecC
Confidence 4443334456889999986
No 42
>2kog_A Vesicle-associated membrane protein 2; synaptobrevin, VAMP2, DPC micelle, snare, coiled coil, membrane fusion, transmembrane; NMR {Rattus norvegicus}
Probab=29.23 E-value=54 Score=23.51 Aligned_cols=14 Identities=21% Similarity=0.140 Sum_probs=5.7
Q ss_pred hhcCCCcchhhHHH
Q 047545 15 RKKGPNRISVTSIV 28 (206)
Q Consensus 15 ~~~~~~~~~~~~~~ 28 (206)
|+-|=..+.+..++
T Consensus 89 rkmwwkn~K~~iii 102 (119)
T 2kog_A 89 RKYWWKNLKMMIIL 102 (119)
T ss_dssp HHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44444444433333
Done!