Citrus Sinensis ID: 047548

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150------
Protein Sequence
MQNDQDVDAVIRKYGSLAPKGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEGLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIST
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccccccEEEEcccccEEEEEEccccccccHHHHHHHHHHHcccccccccccccccccEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccEEEcc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHcccccccEEcHHHHHHHHHcHHHHccccccccEEEcEcccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEc
Coil and Loop (DISEMBL)
MQNDQDVDAVIRKYGslapkgynysdvkkmtnsfsdkvrqggygvvyrgklheGRVAAVKVLSESMGNGEEFINEVACIsgtshvnivtplgiccEGLVYefmsngslhkfiydkgsmstknnrlewtTLSEIVVGVARGLECLIAVATLGLCIST
Flexible Loop (DISEMBL)
MQNDQDVDAVIRkygslapkgynysdVKKMtnsfsdkvrqGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEGLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIST
Low Complexity Region (SEG)
MQNDQDVDAVIRKYGSLAPKGYNYSDVKKMTNSFSDKvrqggygvvyrgKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEGLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIST
Disordered region (IsUnstruct)
*********VIRKYGSLAPKGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEGLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI**
Disordered Region (DISOPRED)
****QDV*AVIRKYGSLAPKGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLS******EEFINEVACISGTSHVNIVTPLGICCEGLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIST
Disordered Region (DISEMBL)
MQNDQDVDAVIRKYGSLAPKGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEGLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIST
Disordered Region (DISPRO)
***DQDVDAVIRKYGSLAPKGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEGLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIST
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQNDQDVDAVIRKYGSLAPKGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEGLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIST
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	156	2.2.26 [Sep-21-2011]
Q3ECH2	892	Probable receptor-like pr	no	no	0.826	0.144	0.535	2e-30
Q9FID6	813	Probable receptor-like pr	no	no	0.769	0.147	0.503	1e-26
Q9FID5	806	Probable receptor-like pr	no	no	0.756	0.146	0.503	9e-26
O64783	814	G-type lectin S-receptor-	no	no	0.775	0.148	0.451	2e-22
Q9SY95	802	G-type lectin S-receptor-	no	no	0.743	0.144	0.464	2e-21
O64778	807	G-type lectin S-receptor-	no	no	0.762	0.147	0.438	3e-21
O64774	749	G-type lectin S-receptor-	no	no	0.762	0.158	0.438	5e-21
O64770	804	G-type lectin S-receptor-	no	no	0.743	0.144	0.448	6e-21
Q9SYA0	804	G-type lectin S-receptor-	no	no	0.743	0.144	0.440	2e-20
O64771	809	G-type lectin S-receptor-	no	no	0.775	0.149	0.439	2e-20

>sp|Q3ECH2|Y1670_ARATH Probable receptor-like protein kinase At1g67000 OS=Arabidopsis thaliana GN=At1g67000 PE=2 SV=2

 Score =  131 bits (330), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/140 (53%), Positives = 99/140 (70%), Gaps = 11/140 (7%)

Query: 11  IRKYGSLAP-KGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMG-N 68
           ++K  +L P K Y Y++VKKMT SF++ V +GG+G+VY G L +  + AVKVL +S G +
Sbjct: 534 LQKLKALIPLKHYTYAEVKKMTKSFTEVVGRGGFGIVYSGTLSDSSMVAVKVLKDSKGTD 593

Query: 69  GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNR 124
           GE+FINEVA +S TSHVNIV+ LG CCEG    ++YEF+ NGSL KFI DK S++     
Sbjct: 594 GEDFINEVASMSQTSHVNIVSLLGFCCEGSRRAIIYEFLGNGSLDKFISDKSSVN----- 648

Query: 125 LEWTTLSEIVVGVARGLECL 144
           L+  TL  I +GVARGLE L
Sbjct: 649 LDLKTLYGIALGVARGLEYL 668

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9FID6|Y5392_ARATH Probable receptor-like protein kinase At5g39020 OS=Arabidopsis thaliana GN=At5g39020 PE=2 SV=1

 Score =  118 bits (296), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/129 (50%), Positives = 85/129 (65%), Gaps = 9/129 (6%)

Query: 20  KGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACI 79
           K Y Y+++KK+T SFS  V +GG+G VYRG L  GR  AVKVL +  GNG++FINEV  +
Sbjct: 484 KQYIYAELKKITKSFSHTVGKGGFGTVYRGNLSNGRTVAVKVLKDLKGNGDDFINEVTSM 543

Query: 80  SGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVV 135
           S TSHVNIV+ LG C EG    ++ EF+ +GSL +FI    S++        TTL  I +
Sbjct: 544 SQTSHVNIVSLLGFCYEGSKRAIISEFLEHGSLDQFISRNKSLTPN-----VTTLYGIAL 598

Query: 136 GVARGLECL 144
           G+ARGLE L
Sbjct: 599 GIARGLEYL 607

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9FID5|Y5393_ARATH Probable receptor-like protein kinase At5g39030 OS=Arabidopsis thaliana GN=At5g39030 PE=2 SV=1

 Score =  115 bits (289), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 64/127 (50%), Positives = 85/127 (66%), Gaps = 9/127 (7%)

Query: 22  YNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISG 81
           Y Y+++KK+T SFS  + +GG+G VY G L  GR  AVKVL +  G+ E+FINEVA +S 
Sbjct: 488 YTYAELKKITKSFSYIIGKGGFGTVYGGNLSNGRKVAVKVLKDLKGSAEDFINEVASMSQ 547

Query: 82  TSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGV 137
           TSHVNIV+ LG C EG    +VYEF+ NGSL +F+    S++      + TTL  I +G+
Sbjct: 548 TSHVNIVSLLGFCFEGSKRAIVYEFLENGSLDQFMSRNKSLTQ-----DVTTLYGIALGI 602

Query: 138 ARGLECL 144
           ARGLE L
Sbjct: 603 ARGLEYL 609

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O64783|Y1137_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 OS=Arabidopsis thaliana GN=At1g61370 PE=3 SV=2

 Score =  104 bits (260), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 85/135 (62%), Gaps = 14/135 (10%)

Query: 17  LAPKGYNYSDVKKM---TNSFS--DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG-E 70
           L P+  N+ D++ +   TN+FS  +K+ QGG+G VY+G L +G+  A+K LS + G G E
Sbjct: 481 LKPQDVNFFDMQTILTITNNFSMENKLGQGGFGPVYKGNLQDGKEIAIKRLSSTSGQGLE 540

Query: 71  EFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLE 126
           EF+NE+  IS   H N+V  LG C EG    L+YEFM+N SL+ FI+D    STK   L+
Sbjct: 541 EFMNEIILISKLQHRNLVRLLGCCIEGEEKLLIYEFMANKSLNTFIFD----STKKLELD 596

Query: 127 WTTLSEIVVGVARGL 141
           W    EI+ G+A GL
Sbjct: 597 WPKRFEIIQGIACGL 611

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SY95|Y1155_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61550 OS=Arabidopsis thaliana GN=At1g61550 PE=2 SV=1

 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/127 (46%), Positives = 78/127 (61%), Gaps = 11/127 (8%)

Query: 22  YNYSDVKKMTNSFS--DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG-EEFINEVAC 78
           +    ++  TN+FS  +K+ QGG+G VY+GKL +G+  AVK LS S G G EEF+NE+  
Sbjct: 477 FEMKTIEIATNNFSLVNKLGQGGFGPVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEILL 536

Query: 79  ISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIV 134
           IS   H+N+V  LG C EG    LVYEFM N SL  FI+D    S K   ++W     I+
Sbjct: 537 ISKLQHINLVRILGCCIEGEERLLVYEFMVNKSLDTFIFD----SRKRVEIDWPKRFSII 592

Query: 135 VGVARGL 141
            G+ARGL
Sbjct: 593 QGIARGL 599

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64778|Y1142_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61420 OS=Arabidopsis thaliana GN=At1g61420 PE=2 SV=2

 Score =  100 bits (250), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 80/130 (61%), Gaps = 11/130 (8%)

Query: 22  YNYSDVKKMTNSFS--DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG-EEFINEVAC 78
           ++   ++  TN+FS  +K+ QGG+G VY+GKL +G+  AVK LS S G G EEF+NE+  
Sbjct: 482 FDMHTIQTATNNFSISNKLGQGGFGPVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEIVL 541

Query: 79  ISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIV 134
           IS   H N+V  LG C EG    L+YEFM N SL  F++D    S K   ++W    +I+
Sbjct: 542 ISKLQHKNLVRILGCCIEGEEKLLIYEFMLNNSLDTFLFD----SRKRLEIDWPKRLDII 597

Query: 135 VGVARGLECL 144
            G+ARG+  L
Sbjct: 598 QGIARGIHYL 607

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64774|Y1146_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61460 OS=Arabidopsis thaliana GN=At1g61460 PE=2 SV=4

 Score =  100 bits (248), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 80/130 (61%), Gaps = 11/130 (8%)

Query: 22  YNYSDVKKMTNSFS--DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG-EEFINEVAC 78
           +  + ++  TN+FS  +K+ QGG+G VY+GKL +G+  AVK LS S G G EEF+NE+  
Sbjct: 442 FEMNTIQTATNNFSLSNKLGQGGFGSVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEIVL 501

Query: 79  ISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIV 134
           IS   H N+V  LG C EG    L+YEFM N SL  F++D    S K   ++W    +I+
Sbjct: 502 ISKLQHKNLVRILGCCIEGEERLLIYEFMLNKSLDTFLFD----SRKRLEIDWPKRFDII 557

Query: 135 VGVARGLECL 144
            G+ARG+  L
Sbjct: 558 QGIARGIHYL 567

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64770|Y1649_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61490 OS=Arabidopsis thaliana GN=At1g61490 PE=3 SV=1

 Score = 99.8 bits (247), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 11/127 (8%)

Query: 22  YNYSDVKKMTNSFS--DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG-EEFINEVAC 78
           +  + ++  TN+FS  +K+ QGG+G VY+GKL +G+  AVK LS S G G EEF+NE+  
Sbjct: 478 FEMNTIQTATNNFSLSNKLGQGGFGSVYKGKLQDGKEIAVKQLSSSSGQGKEEFMNEIVL 537

Query: 79  ISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIV 134
           IS   H N+V  LG C EG    L+YEFM N SL  F++D    + K   ++W    +IV
Sbjct: 538 ISKLQHRNLVRVLGCCIEGEEKLLIYEFMLNKSLDTFVFD----ARKKLEVDWPKRFDIV 593

Query: 135 VGVARGL 141
            G+ARGL
Sbjct: 594 QGIARGL 600

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SYA0|Y1150_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61500 OS=Arabidopsis thaliana GN=At1g61500 PE=2 SV=2

 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 78/127 (61%), Gaps = 11/127 (8%)

Query: 22  YNYSDVKKMTNSFS--DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG-EEFINEVAC 78
           ++   ++  TN+FS  +K+ QGG+G VY+GKL +G+  AVK LS S G G EEF+NE+  
Sbjct: 479 FDMHTIQNATNNFSLSNKLGQGGFGSVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEIVL 538

Query: 79  ISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIV 134
           IS   H N+V  LG C E     L+YEFM N SL  F++D    S K   ++W    +I+
Sbjct: 539 ISKLQHRNLVRVLGCCIEEEEKLLIYEFMVNKSLDTFLFD----SRKRLEIDWPKRFDII 594

Query: 135 VGVARGL 141
            G+ARGL
Sbjct: 595 QGIARGL 601

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64771|Y1148_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61480 OS=Arabidopsis thaliana GN=At1g61480 PE=2 SV=2

 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/132 (43%), Positives = 80/132 (60%), Gaps = 11/132 (8%)

Query: 20  KGYNYSDVKKMTNSFS--DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG-EEFINEV 76
           K +  + ++  T++FS  +K+ QGG+G VY+GKL +G+  AVK LS S G G EEF+NE+
Sbjct: 482 KFFEMNTIQTATDNFSLSNKLGQGGFGSVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEI 541

Query: 77  ACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSE 132
             IS   H N+V  LG C EG    LVYEF+ N SL  F++D    S K   ++W     
Sbjct: 542 VLISKLQHKNLVRILGCCIEGEERLLVYEFLLNKSLDTFLFD----SRKRLEIDWPKRFN 597

Query: 133 IVVGVARGLECL 144
           I+ G+ARGL  L
Sbjct: 598 IIEGIARGLHYL 609

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	156
296087257	584	unnamed protein product [Vitis vinifera]	0.910	0.243	0.632	3e-45
225452094	858	PREDICTED: probable receptor-like protei	0.903	0.164	0.643	2e-43
147812634	917	hypothetical protein VITISV_036944 [Viti	0.903	0.153	0.643	2e-43
255551426	638	serine/threonine kinase, putative [Ricin	0.916	0.224	0.581	6e-41
359472674	637	PREDICTED: probable receptor-like protei	0.903	0.221	0.602	2e-40
147795963	624	hypothetical protein VITISV_039936 [Viti	0.903	0.225	0.602	2e-40
147769927	1001	hypothetical protein VITISV_010117 [Viti	0.903	0.140	0.602	2e-40
225452090	545	PREDICTED: probable receptor-like protei	0.910	0.260	0.585	2e-40
224095678	365	predicted protein [Populus trichocarpa]	0.910	0.389	0.613	3e-40
224133128	333	predicted protein [Populus trichocarpa]	0.891	0.417	0.618	4e-40

>gi|296087257|emb|CBI33631.3| unnamed protein product [Vitis vinifera]

 Score =  186 bits (471), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 93/147 (63%), Positives = 118/147 (80%), Gaps = 5/147 (3%)

Query: 2   QNDQDVDAVIRKYGSLAPKGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKV 61
           ++D++V+A IR YGSLAPK YNYSDVKKMTNSF+ K+ +GG+G VY+GKL +GR+ AVK+
Sbjct: 297 EDDENVEAFIRNYGSLAPKRYNYSDVKKMTNSFTSKLGEGGFGCVYKGKLPDGRMMAVKL 356

Query: 62  LSESMGNGEEFINEVACISGTSHVNIVTPLGICCE----GLVYEFMSNGSLHKFIYDKGS 117
           LS+S GNG++FINEVA IS TSHVNIVT +G C E     L+YEFM NGSL KFIY++GS
Sbjct: 357 LSKSKGNGQDFINEVASISRTSHVNIVTFMGFCFERSRRALIYEFMPNGSLDKFIYNRGS 416

Query: 118 MSTKNNRLEWTTLSEIVVGVARGLECL 144
            S ++  LEW T+ +I VG+ARGLE L
Sbjct: 417 -SNESLNLEWKTMYQIAVGIARGLEYL 442

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452094|ref|XP_002280747.1| PREDICTED: probable receptor-like protein kinase At1g67000-like [Vitis vinifera]

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 94/146 (64%), Positives = 111/146 (76%), Gaps = 5/146 (3%)

Query: 3   NDQDVDAVIRKYGSLAPKGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVL 62
           ++Q+V+A +R YGSLAPK Y YS VKKMTNSF+ K+ QGG+G VY+GKL +GR  AVK+L
Sbjct: 526 DNQNVEAFVRNYGSLAPKRYKYSVVKKMTNSFTCKLGQGGFGCVYQGKLPDGRQVAVKLL 585

Query: 63  SESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSM 118
           SES GNGEEFINEVA  S TSHVNIVT +G C EG    L+YEFM NGSL K IY KGS 
Sbjct: 586 SESKGNGEEFINEVASFSRTSHVNIVTLVGFCFEGTRRALIYEFMPNGSLDKLIYQKGS- 644

Query: 119 STKNNRLEWTTLSEIVVGVARGLECL 144
              N +LEW T+ +I VG+ARGLE L
Sbjct: 645 PNANLKLEWKTMYQIAVGIARGLEYL 670

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147812634|emb|CAN75059.1| hypothetical protein VITISV_036944 [Vitis vinifera]

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 94/146 (64%), Positives = 111/146 (76%), Gaps = 5/146 (3%)

Query: 3   NDQDVDAVIRKYGSLAPKGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVL 62
           ++Q+V+A +R YGSLAPK Y YS VKKMTNSF+ K+ QGG+G VY+GKL +GR  AVK+L
Sbjct: 560 DNQNVEAFVRNYGSLAPKRYKYSVVKKMTNSFTCKLGQGGFGCVYQGKLPDGRQVAVKLL 619

Query: 63  SESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSM 118
           SES GNGEEFINEVA  S TSHVNIVT +G C EG    L+YEFM NGSL K IY KGS 
Sbjct: 620 SESKGNGEEFINEVASFSRTSHVNIVTLVGFCFEGTRRALIYEFMPNGSLDKLIYQKGS- 678

Query: 119 STKNNRLEWTTLSEIVVGVARGLECL 144
              N +LEW T+ +I VG+ARGLE L
Sbjct: 679 PNANLKLEWKTMYQIAVGIARGLEYL 704

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255551426|ref|XP_002516759.1| serine/threonine kinase, putative [Ricinus communis] gi|223544132|gb|EEF45657.1| serine/threonine kinase, putative [Ricinus communis]

 Score =  171 bits (434), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 86/148 (58%), Positives = 110/148 (74%), Gaps = 5/148 (3%)

Query: 1   MQNDQDVDAVIRKYGSLAPKGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVK 60
           ++ D+ ++  I  Y S  PK Y+YSD+++MTNSF+ K+ QGG+G VY+GKL +GRV AVK
Sbjct: 296 VKKDEKIENFILNYQSFMPKRYSYSDIQRMTNSFNHKLGQGGFGGVYKGKLLDGRVVAVK 355

Query: 61  VLSESMGNGEEFINEVACISGTSHVNIVTPLGICCE----GLVYEFMSNGSLHKFIYDKG 116
           VLS+S G+GEEFINEVA IS TSH+N+VT LG C E     L+YE+M NGSL KFIYD+G
Sbjct: 356 VLSKSTGDGEEFINEVASISRTSHINVVTLLGFCYERSKRALIYEYMPNGSLDKFIYDQG 415

Query: 117 SMSTKNNRLEWTTLSEIVVGVARGLECL 144
           S    N  L+W TL +I VG+ARGLE L
Sbjct: 416 SQGV-NKHLDWKTLYDITVGIARGLEYL 442

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359472674|ref|XP_002279652.2| PREDICTED: probable receptor-like protein kinase At1g67000-like [Vitis vinifera]

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 88/146 (60%), Positives = 108/146 (73%), Gaps = 5/146 (3%)

Query: 3   NDQDVDAVIRKYGSLAPKGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVL 62
           N  +V+  +R + SLAPK Y YS+V+KMT+SF D+V +GGYG VY+GKL  G + AVKVL
Sbjct: 303 NHLNVETFLRNHESLAPKRYRYSEVQKMTSSFKDRVGEGGYGAVYKGKLLNGDLVAVKVL 362

Query: 63  SESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSM 118
           SE+ GNGEEFINE+A IS TSHVNIV+ LG C +G    L+YEFM NGSL KFIYDK S 
Sbjct: 363 SETKGNGEEFINEIASISRTSHVNIVSLLGFCFQGSKRALIYEFMPNGSLEKFIYDKNS- 421

Query: 119 STKNNRLEWTTLSEIVVGVARGLECL 144
           S   ++L W TL  I +G+ARGLE L
Sbjct: 422 SMTYDKLGWETLYNIAIGIARGLEYL 447

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147795963|emb|CAN69599.1| hypothetical protein VITISV_039936 [Vitis vinifera]

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 88/146 (60%), Positives = 108/146 (73%), Gaps = 5/146 (3%)

Query: 3   NDQDVDAVIRKYGSLAPKGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVL 62
           N  +V+  +R + SLAPK Y YS+V+KMT+SF D+V +GGYG VY+GKL  G + AVKVL
Sbjct: 290 NHLNVETFLRNHESLAPKRYRYSEVQKMTSSFKDRVGEGGYGAVYKGKLLNGDLVAVKVL 349

Query: 63  SESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSM 118
           SE+ GNGEEFINE+A IS TSHVNIV+ LG C +G    L+YEFM NGSL KFIYDK S 
Sbjct: 350 SETKGNGEEFINEIASISRTSHVNIVSLLGFCFQGSKRALIYEFMPNGSLEKFIYDKNS- 408

Query: 119 STKNNRLEWTTLSEIVVGVARGLECL 144
           S   ++L W TL  I +G+ARGLE L
Sbjct: 409 SMTYDKLGWETLYNIAIGIARGLEYL 434

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147769927|emb|CAN76446.1| hypothetical protein VITISV_010117 [Vitis vinifera]

 Score =  170 bits (430), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 88/146 (60%), Positives = 108/146 (73%), Gaps = 5/146 (3%)

Query: 3   NDQDVDAVIRKYGSLAPKGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVL 62
           N  +V+  +R + SLAPK Y YS+V+KMT+SF D+V +GGYG VY+GKL  G + AVKVL
Sbjct: 667 NHLNVETFLRNHESLAPKRYRYSEVQKMTSSFKDRVGEGGYGAVYKGKLLNGDLVAVKVL 726

Query: 63  SESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSM 118
           SE+ GNGEEFINE+A IS TSHVNIV+ LG C +G    L+YEFM NGSL KFIYDK S 
Sbjct: 727 SETKGNGEEFINEIASISRTSHVNIVSLLGFCFQGSKRALIYEFMPNGSLEKFIYDKNS- 785

Query: 119 STKNNRLEWTTLSEIVVGVARGLECL 144
           S   ++L W TL  I +G+ARGLE L
Sbjct: 786 SMTYHKLGWETLYNIAIGIARGLEYL 811

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452090|ref|XP_002280726.1| PREDICTED: probable receptor-like protein kinase At1g67000-like [Vitis vinifera]

 Score =  169 bits (429), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/147 (58%), Positives = 107/147 (72%), Gaps = 5/147 (3%)

Query: 2   QNDQDVDAVIRKYGSLAPKGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKV 61
           +N Q+V+A + KY SLAPK Y+YSDVKKMT+SF +K+ QGGYG+VY+G L +G +  VK+
Sbjct: 193 RNSQNVEAFLEKYASLAPKRYSYSDVKKMTDSFRNKLGQGGYGIVYKGNLPDGHLVVVKI 252

Query: 62  LSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGS 117
           LSE  GNGEEFINEVA IS TSHVNIVT LG C EG    L+YEFM +GSL K+IYD+ +
Sbjct: 253 LSEPKGNGEEFINEVASISRTSHVNIVTLLGFCFEGHKRALIYEFMPSGSLEKYIYDE-N 311

Query: 118 MSTKNNRLEWTTLSEIVVGVARGLECL 144
              K   L W  +  I +G+A GLE L
Sbjct: 312 QPRKIPPLGWEKIYRIAIGIAHGLEYL 338

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224095678|ref|XP_002334738.1| predicted protein [Populus trichocarpa] gi|222874466|gb|EEF11597.1| predicted protein [Populus trichocarpa]

 Score =  169 bits (428), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 92/150 (61%), Positives = 108/150 (72%), Gaps = 8/150 (5%)

Query: 2   QNDQDVDAV---IRKYGSLAPKGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAA 58
           +N Q VD+V   +  Y SL PK Y+YSD+KKMT+SF++ + QGG+G VYRGKL EGR+ A
Sbjct: 6   KNSQHVDSVETFMMDYHSLTPKRYSYSDIKKMTSSFANILGQGGFGNVYRGKLPEGRLVA 65

Query: 59  VKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCE----GLVYEFMSNGSLHKFIYD 114
           VKVL ES  +GEEF+NEVA IS TSHVN+VT LG C E     L+YEFM NGSL  FI D
Sbjct: 66  VKVLKESKDDGEEFMNEVASISRTSHVNVVTLLGFCYERNKRALIYEFMPNGSLDSFISD 125

Query: 115 KGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           KGS  T N RLEW  L EI V +ARGLE L
Sbjct: 126 KGSPHT-NCRLEWKKLYEIAVSIARGLEYL 154

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133128|ref|XP_002321489.1| predicted protein [Populus trichocarpa] gi|222868485|gb|EEF05616.1| predicted protein [Populus trichocarpa]

 Score =  169 bits (427), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 89/144 (61%), Positives = 104/144 (72%), Gaps = 5/144 (3%)

Query: 5   QDVDAVIRKYGSLAPKGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSE 64
           QD++  IR +G LA K YN SDVKKMTN F DK+ QGGYG+VY+GKL +G + AVKV   
Sbjct: 1   QDLEVFIRNHGPLALKRYNLSDVKKMTNFFKDKLGQGGYGIVYKGKLQDGHLVAVKVTQA 60

Query: 65  SMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMST 120
           S G+GEEFINEVA IS TSHVNIVT LG C EG    L+Y+FM NGSL KFI  K + S 
Sbjct: 61  SKGDGEEFINEVASISRTSHVNIVTLLGFCLEGDKRVLIYDFMVNGSLEKFINHKNA-SQ 119

Query: 121 KNNRLEWTTLSEIVVGVARGLECL 144
            N +L W  L +I+VGVARGLE L
Sbjct: 120 ANQQLGWNKLYQILVGVARGLEYL 143

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	156
TAIR|locus:2176737	665	PR5K "PR5-like receptor kinase	0.839	0.196	0.496	5.3e-25
TAIR|locus:2204480	666	AT1G66910 [Arabidopsis thalian	0.794	0.186	0.5	8.7e-25
TAIR|locus:2141862	853	AT4G18250 [Arabidopsis thalian	0.839	0.153	0.486	1.2e-24
TAIR|locus:2019713	892	AT1G67000 [Arabidopsis thalian	0.826	0.144	0.485	5.5e-24
TAIR|locus:2019688	674	AT1G66930 [Arabidopsis thalian	0.814	0.188	0.485	2.7e-22
TAIR|locus:2020583	799	AT1G70250 [Arabidopsis thalian	0.839	0.163	0.455	3.5e-21
TAIR|locus:2176717	638	AT5G38260 [Arabidopsis thalian	0.801	0.195	0.447	3.7e-21
TAIR|locus:2177152	806	AT5G39030 [Arabidopsis thalian	0.756	0.146	0.456	5e-19
TAIR|locus:2177142	813	AT5G39020 [Arabidopsis thalian	0.769	0.147	0.457	6.5e-19
TAIR|locus:2176707	579	AT5G38250 [Arabidopsis thalian	0.538	0.145	0.515	9.8e-16

TAIR|locus:2176737 PR5K "PR5-like receptor kinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 5.3e-25, P = 5.3e-25
 Identities = 73/147 (49%), Positives = 91/147 (61%)

Query:     3 NDQDVDAVIRKYGSLAPKGYNYSDVKKMTNSFSDKXXXXXXXXXXXXKLHE-GRVAAVKV 61
             NDQ+V+AV         K Y+Y+ VKKMTNSF+              KL + GR  AVK+
Sbjct:   308 NDQNVEAVAML------KRYSYTRVKKMTNSFAHVLGKGGFGTVYKGKLADSGRDVAVKI 361

Query:    62 LSESMGNGEEFINEVACISGTSHVNIVTPLGICCE----GLVYEFMSNGSLHKFIYDKGS 117
             L  S GNGEEFINEVA +S TSHVNIV+ LG C E     ++YEFM NGSL K+I    +
Sbjct:   362 LKVSEGNGEEFINEVASMSRTSHVNIVSLLGFCYEKNKRAIIYEFMPNGSLDKYI--SAN 419

Query:   118 MSTKNNRLEWTTLSEIVVGVARGLECL 144
             MSTK   +EW  L ++ VG++RGLE L
Sbjct:   420 MSTK---MEWERLYDVAVGISRGLEYL 443

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0009691 "cytokinin biosynthetic process" evidence=RCA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0009620 "response to fungus" evidence=ISS

TAIR|locus:2204480 AT1G66910 [Arabidopsis thaliana (taxid:3702)]

 Score = 291 (107.5 bits), Expect = 8.7e-25, P = 8.7e-25
 Identities = 67/134 (50%), Positives = 84/134 (62%)

Query:    16 SLAP-KGYNYSDVKKMTNSFSDKXXXXXXXXXXXXKLHEGRVAAVKVLSESMGNGEEFIN 74
             +L P K Y+Y+ V  +T SF++              L++GR  AVKVL ES GNGE+FIN
Sbjct:   331 ALIPLKHYSYAQVTSITKSFAEVIGKGGFGTVYRGTLYDGRSVAVKVLKESQGNGEDFIN 390

Query:    75 EVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTL 130
             EVA +S TSHVNIVT LG C EG    ++YEFM NGSL KFI  K     K++ ++W  L
Sbjct:   391 EVASMSQTSHVNIVTLLGFCSEGYKRAIIYEFMENGSLDKFISSK-----KSSTMDWREL 445

Query:   131 SEIVVGVARGLECL 144
               I +GVARGLE L
Sbjct:   446 YGIALGVARGLEYL 459

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2141862 AT4G18250 [Arabidopsis thaliana (taxid:3702)]

 Score = 292 (107.8 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 72/148 (48%), Positives = 90/148 (60%)

Query:     3 NDQDVDAVIRKYGSLAPKGYNYSDVKKMTNSFSDKXXXXXXXXXXXXKLHE--GRVAAVK 60
             ND++++AV+        K Y++  VKKMTNSF               KL +  GR  A+K
Sbjct:   496 NDENIEAVVML------KRYSFEKVKKMTNSFDHVIGKGGFGTVYKGKLPDASGRDIALK 549

Query:    61 VLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKG 116
             +L ES GNGEEFINE+  +S  SHVNIV+  G C EG    ++YEFM NGSL KFI +  
Sbjct:   550 ILKESKGNGEEFINELVSMSRASHVNIVSLFGFCYEGSQRAIIYEFMPNGSLDKFISE-- 607

Query:   117 SMSTKNNRLEWTTLSEIVVGVARGLECL 144
             +MSTK   +EW TL  I VGVARGLE L
Sbjct:   608 NMSTK---IEWKTLYNIAVGVARGLEYL 632

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2019713 AT1G67000 [Arabidopsis thaliana (taxid:3702)]

 Score = 286 (105.7 bits), Expect = 5.5e-24, P = 5.5e-24
 Identities = 68/140 (48%), Positives = 89/140 (63%)

Query:    11 IRKYGSLAP-KGYNYSDVKKMTNSFSDKXXXXXXXXXXXXKLHEGRVAAVKVLSESMG-N 68
             ++K  +L P K Y Y++VKKMT SF++              L +  + AVKVL +S G +
Sbjct:   534 LQKLKALIPLKHYTYAEVKKMTKSFTEVVGRGGFGIVYSGTLSDSSMVAVKVLKDSKGTD 593

Query:    69 GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNR 124
             GE+FINEVA +S TSHVNIV+ LG CCEG    ++YEF+ NGSL KFI DK S++     
Sbjct:   594 GEDFINEVASMSQTSHVNIVSLLGFCCEGSRRAIIYEFLGNGSLDKFISDKSSVN----- 648

Query:   125 LEWTTLSEIVVGVARGLECL 144
             L+  TL  I +GVARGLE L
Sbjct:   649 LDLKTLYGIALGVARGLEYL 668

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2019688 AT1G66930 [Arabidopsis thaliana (taxid:3702)]

 Score = 268 (99.4 bits), Expect = 2.7e-22, P = 2.7e-22
 Identities = 67/138 (48%), Positives = 85/138 (61%)

Query:    13 KYGSLAP-KGYNYSDVKKMTNSFSDKXXXXXXXXXXXXKLHEGRVAAVKVLSESMGNG-E 70
             K  +L P K Y Y+ VK+MT SF++              L +GR+ AVKVL ES GN  E
Sbjct:   326 KLKALIPLKHYTYAQVKRMTKSFAEVVGRGGFGIVYRGTLCDGRMVAVKVLKESKGNNSE 385

Query:    71 EFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLE 126
             +FINEV+ +S TSHVNIV+ LG C EG    ++YEF+ NGSL KFI +K S+      L+
Sbjct:   386 DFINEVSSMSQTSHVNIVSLLGFCSEGSRRAIIYEFLENGSLDKFISEKTSVI-----LD 440

Query:   127 WTTLSEIVVGVARGLECL 144
              T L  I +GVARGLE L
Sbjct:   441 LTALYGIALGVARGLEYL 458

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2020583 AT1G70250 [Arabidopsis thaliana (taxid:3702)]

 Score = 259 (96.2 bits), Expect = 3.5e-21, P = 3.5e-21
 Identities = 67/147 (45%), Positives = 88/147 (59%)

Query:     3 NDQDVDAVIRKYGSLAPKGYNYSDVKKMTNSFSDKXXXXXXXXXXXXKLHEG-RVAAVKV 61
             N+++++AV+        K ++Y  VKKMT SF +             KL +G R  AVK+
Sbjct:   436 NEKNMEAVVML------KRFSYVQVKKMTKSFENVLGKGGFGTVYKGKLPDGSRDVAVKI 489

Query:    62 LSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGS 117
             L ES  +GE+FINE+A +S TSH NIV+ LG C EG    ++YE M NGSL KFI  K +
Sbjct:   490 LKESNEDGEDFINEIASMSRTSHANIVSLLGFCYEGRKKAIIYELMPNGSLDKFI-SK-N 547

Query:   118 MSTKNNRLEWTTLSEIVVGVARGLECL 144
             MS K   +EW TL  I VGV+ GLE L
Sbjct:   548 MSAK---MEWKTLYNIAVGVSHGLEYL 571

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2176717 AT5G38260 [Arabidopsis thaliana (taxid:3702)]

 Score = 257 (95.5 bits), Expect = 3.7e-21, P = 3.7e-21
 Identities = 60/134 (44%), Positives = 83/134 (61%)

Query:    15 GSLAPKGYNYSDVKKMTNSFSDKXXXXXXXXXXXXKLHEGRVAAVKVLSESMGNGEEFIN 74
             G +  K Y+Y++V+K+T  FS               L +GR  AVK+L +   NGE+FIN
Sbjct:   304 GLVQLKQYSYAEVRKITKLFSHTLGKGGFGTVYGGNLCDGRKVAVKILKDFKSNGEDFIN 363

Query:    75 EVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTL 130
             EVA +S TSHVNIV+ LG C EG    +VYEF+ NGSL +F+ +K S++     L+ +TL
Sbjct:   364 EVASMSQTSHVNIVSLLGFCYEGSKRAIVYEFLENGSLDQFLSEKKSLN-----LDVSTL 418

Query:   131 SEIVVGVARGLECL 144
               I +GVARGL+ L
Sbjct:   419 YRIALGVARGLDYL 432

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2177152 AT5G39030 [Arabidopsis thaliana (taxid:3702)]

 Score = 239 (89.2 bits), Expect = 5.0e-19, P = 5.0e-19
 Identities = 58/127 (45%), Positives = 76/127 (59%)

Query:    22 YNYSDVKKMTNSFSDKXXXXXXXXXXXXKLHEGRVAAVKVLSESMGNGEEFINEVACISG 81
             Y Y+++KK+T SFS               L  GR  AVKVL +  G+ E+FINEVA +S 
Sbjct:   488 YTYAELKKITKSFSYIIGKGGFGTVYGGNLSNGRKVAVKVLKDLKGSAEDFINEVASMSQ 547

Query:    82 TSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGV 137
             TSHVNIV+ LG C EG    +VYEF+ NGSL +F+    S++      + TTL  I +G+
Sbjct:   548 TSHVNIVSLLGFCFEGSKRAIVYEFLENGSLDQFMSRNKSLTQ-----DVTTLYGIALGI 602

Query:   138 ARGLECL 144
             ARGLE L
Sbjct:   603 ARGLEYL 609

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2177142 AT5G39020 [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 59/129 (45%), Positives = 76/129 (58%)

Query:    20 KGYNYSDVKKMTNSFSDKXXXXXXXXXXXXKLHEGRVAAVKVLSESMGNGEEFINEVACI 79
             K Y Y+++KK+T SFS               L  GR  AVKVL +  GNG++FINEV  +
Sbjct:   484 KQYIYAELKKITKSFSHTVGKGGFGTVYRGNLSNGRTVAVKVLKDLKGNGDDFINEVTSM 543

Query:    80 SGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVV 135
             S TSHVNIV+ LG C EG    ++ EF+ +GSL +FI    S+ T N     TTL  I +
Sbjct:   544 SQTSHVNIVSLLGFCYEGSKRAIISEFLEHGSLDQFISRNKSL-TPNV----TTLYGIAL 598

Query:   136 GVARGLECL 144
             G+ARGLE L
Sbjct:   599 GIARGLEYL 607

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009581 "detection of external stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009625 "response to insect" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0051707 "response to other organism" evidence=RCA

TAIR|locus:2176707 AT5G38250 [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 51/99 (51%), Positives = 64/99 (64%)

Query:    50 KLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN 105
             +L +GR  AVKVL +S GN E+FINEVA +S TSHVNIVT LG C EG    ++YEF+ N
Sbjct:   291 RLRDGRKVAVKVLKDSKGNCEDFINEVASMSQTSHVNIVTLLGFCYEGSKRAIIYEFLEN 350

Query:   106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
             GSL + +            L+ +TL  I +GVARGLE L
Sbjct:   351 GSLDQSL-----------NLDVSTLYGIALGVARGLEYL 378

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00038261001 SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (394 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	156
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-15
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	3e-15
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-15
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	5e-15
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	7e-15
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	5e-12
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	5e-12
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-10
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	4e-10
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	3e-09
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	4e-08
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	5e-08
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	8e-08
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	9e-08
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	9e-08
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-07
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-07
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	3e-07
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	5e-07
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-06
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	2e-06
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-06
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	3e-06
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	3e-06
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	4e-06
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	5e-06
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	1e-05
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	2e-05
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	4e-05
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	4e-05
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	5e-05
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	6e-05
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	6e-05
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	6e-05
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	8e-05
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	1e-04
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	1e-04
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	1e-04
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-04
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	2e-04
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-04
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	3e-04
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-04
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	3e-04
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	3e-04
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	3e-04
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	4e-04
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	4e-04
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	5e-04
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	5e-04
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	6e-04
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	7e-04
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	8e-04
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	0.001
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	0.001
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	0.001
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	0.002
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	0.002
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	0.003
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	0.003
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	0.003
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	0.003
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	0.004
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	0.004

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 71.0 bits (175), Expect = 1e-15
 Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 12/119 (10%)

Query: 36  DKVRQGGYGVVYRGKLHEG----RVAAVKVLSESMGNGE--EFINEVACISGTSHVNIVT 89
            K+ +G +G VY+GKL          AVK L E     E  +F+ E   +    H N+V 
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 90  PLGICCEG----LVYEFMSNGSLHKFI--YDKGSMSTKNNRLEWTTLSEIVVGVARGLE 142
            LG+C E     LV E+M  G L  ++        S + + L    L    + +A+G+E
Sbjct: 61  LLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGME 119

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 70.3 bits (173), Expect = 3e-15
 Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 16/121 (13%)

Query: 33  SFSDKVRQGGYGVVYRGKL-----HEGRVAAVKVLSE--SMGNGEEFINEVACISGTSHV 85
           +   K+ +G +G VY+G L      +    AVK L E  S    EEF+ E   +    H 
Sbjct: 2   TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHP 61

Query: 86  NIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGL 141
           NIV  LG+C E     +V E+M  G L  ++        +   L  + L    + +ARG+
Sbjct: 62  NIVKLLGVCTEEEPLMIVMEYMPGGDLLDYL-----RKNRPKELSLSDLLSFALQIARGM 116

Query: 142 E 142
           E
Sbjct: 117 E 117

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 69.2 bits (170), Expect = 3e-15
 Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 13/112 (11%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLS--ESMGNGEEFINEVACISGTSHVNIVTPLGIC-- 94
           +GG+G VY  +  + G+  A+K++   +S    EE + E+  +   +H NIV   G+   
Sbjct: 3   EGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFED 62

Query: 95  --CEGLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
                LV E+   GSL   + +         +L    +  I++ +  GLE L
Sbjct: 63  ENHLYLVMEYCEGGSLKDLLKE------NEGKLSEDEILRILLQILEGLEYL 108

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 69.5 bits (171), Expect = 5e-15
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 17/121 (14%)

Query: 33  SFSDKVRQGGYGVVYRGKL-----HEGRVAAVKVLSE--SMGNGEEFINEVACISGTSHV 85
           +   K+ +G +G VY+GKL      +    AVK L E  S    EEF+ E   +    H 
Sbjct: 2   TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHP 61

Query: 86  NIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGL 141
           N+V  LG+C E     +V E+M  G L  ++           +L  + L    + +ARG+
Sbjct: 62  NVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNR------PKLSLSDLLSFALQIARGM 115

Query: 142 E 142
           E
Sbjct: 116 E 116

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 69.1 bits (170), Expect = 7e-15
 Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 19/115 (16%)

Query: 40  QGGYGVVYRGKL------HEGRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPL 91
           +G +G VY+G L       E +VA VK L E       EEF+ E + +   SH NIV  L
Sbjct: 9   EGAFGEVYKGTLKGDGEGTETKVA-VKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLL 67

Query: 92  GICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLE 142
           G+C +G    +V E+M  G L  F+   G       +L    L ++ + +A+G+E
Sbjct: 68  GVCTQGEPLYIVTEYMPGGDLLDFLRKHG------EKLTLKDLLQMALQIAKGME 116

Length = 258

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 61.5 bits (150), Expect = 5e-12
 Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 15/111 (13%)

Query: 40  QGGYGVVYRGKLH-EGRVAAVKVL---SESMGNGEEFINEVACISGTSHVNIVTPLGICC 95
            G +G VY+ K    G++ AVK+L   SE     +    E+  +   SH NIV  +    
Sbjct: 9   SGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFE 68

Query: 96  EG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLE 142
           +     LV E+   G L  ++       ++   L      +I + + RGLE
Sbjct: 69  DKDHLYLVMEYCEGGDLFDYL-------SRGGPLSEDEAKKIALQILRGLE 112

Length = 260

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 61.3 bits (149), Expect = 5e-12
 Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 19/137 (13%)

Query: 27  VKKMTNSFSDKVRQGGYGVVYRGKLHEGR------VAAVKVLSESMGNG--EEFINEVAC 78
           V++ T     ++ +G +G V+ G+ +         + AVK L E+  N   ++F  E   
Sbjct: 2   VQRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAEL 61

Query: 79  ISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKG-------SMSTKNNRLEW 127
           ++   H NIV   G+C EG    +V+E+M +G L+KF+   G       S  +    L  
Sbjct: 62  LTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTL 121

Query: 128 TTLSEIVVGVARGLECL 144
           + L +I V +A G+  L
Sbjct: 122 SQLLQIAVQIASGMVYL 138

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 57.5 bits (140), Expect = 1e-10
 Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 7/87 (8%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCE 96
           +G +G VY  +  + G++ A+KV+ +       E  + E+  +    H NIV    +  +
Sbjct: 9   EGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFED 68

Query: 97  G----LVYEFMSNGSLHKFIYDKGSMS 119
                LV E+   G L   +  +G +S
Sbjct: 69  EDKLYLVMEYCEGGDLFDLLKKRGRLS 95

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 56.1 bits (135), Expect = 4e-10
 Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 12/117 (10%)

Query: 33  SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLG 92
           +   ++  G +G+V+ G   E R  A+K + E   + E+FI E   +   SH  +V   G
Sbjct: 7   TLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYG 66

Query: 93  ICCEG----LVYEFMSNGSLHKFI-YDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           +C E     LV+EFM +G L  ++   +G  S +       TL  + + V  G+  L
Sbjct: 67  VCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQE-------TLLGMCLDVCEGMAYL 116

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 54.0 bits (130), Expect = 3e-09
 Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 21/132 (15%)

Query: 34  FSDKVRQGGYGVVYRGKL---HEGRVA---AVKVLSE--SMGNGEEFINEVACISGTSHV 85
           F +++ +G +G VY+G+L   +E   A   A+K L E       +EF  E   +S   H 
Sbjct: 9   FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHP 68

Query: 86  NIVTPLGICCEG----LVYEFMSNGSLHKF------IYDKGSMS---TKNNRLEWTTLSE 132
           NIV  LG+C +     +++E++++G LH+F        D G+ S   T  + L+ +    
Sbjct: 69  NIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLH 128

Query: 133 IVVGVARGLECL 144
           I + +A G+E L
Sbjct: 129 IAIQIAAGMEYL 140

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 50.5 bits (121), Expect = 4e-08
 Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 4/84 (4%)

Query: 33  SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLG 92
           +F  ++  G +GVV+ GK       A+K++ E   + ++FI E   +   SH N+V   G
Sbjct: 7   TFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYG 66

Query: 93  ICCEG----LVYEFMSNGSLHKFI 112
           +C +     +V E+M+NG L  ++
Sbjct: 67  VCTKQRPIFIVTEYMANGCLLNYL 90

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 50.1 bits (120), Expect = 5e-08
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 34  FSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGI 93
               + +G +G V  G  + G+  AVK L +     + F+ E + ++   H N+V  LG+
Sbjct: 10  LGATIGKGEFGDVMLG-DYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGV 68

Query: 94  CCEG----LVYEFMSNGSLHKFIYDKG 116
             +G    +V E+M+ GSL  ++  +G
Sbjct: 69  VLQGNPLYIVTEYMAKGSLVDYLRSRG 95

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 49.5 bits (118), Expect = 8e-08
 Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 12/118 (10%)

Query: 33  SFSDKVRQGGYGVVYRG--KLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTP 90
           +   K+  G YG VY G  K +     AVK L E     EEF+ E A +    H N+V  
Sbjct: 9   TMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 67

Query: 91  LGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           LG+C       ++ EFM+ G+L  ++ +          +    L  +   ++  +E L
Sbjct: 68  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-----VNAVVLLYMATQISSAMEYL 120

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 49.4 bits (118), Expect = 9e-08
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 12/115 (10%)

Query: 36  DKVRQGGYGVVYRGKLHEGRVAAVKVLSESM--GNGEEFINEVACISGTSHVNIVTPLGI 93
           +K+ +G +G VY+G L      AVK    ++      +F+ E   +    H NIV  +G+
Sbjct: 1   EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGV 60

Query: 94  CCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           C +     +V E +  GSL  F      +  K NRL    L ++ +  A G+E L
Sbjct: 61  CVQKQPIYIVMELVPGGSLLTF------LRKKKNRLTVKKLLQMSLDAAAGMEYL 109

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 49.4 bits (118), Expect = 9e-08
 Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 20/123 (16%)

Query: 40  QGGYGVVYRGKLHEGRVAAVKVLSESM-------GNGEEFINEVACISGTSHVNIVTPLG 92
           +G +G V  G+L +   + +KV  ++M          EEF++E AC+    H N++  +G
Sbjct: 9   EGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIG 68

Query: 93  ICCEG----------LVYEFMSNGSLHKFI-YDKGSMSTKNNRLEWTTLSEIVVGVARGL 141
           +C E           ++  FM +G LH F+ Y +     +   L+  TL + +V +A G+
Sbjct: 69  VCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQ--TLLKFMVDIALGM 126

Query: 142 ECL 144
           E L
Sbjct: 127 EYL 129

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 48.3 bits (116), Expect = 2e-07
 Identities = 30/120 (25%), Positives = 45/120 (37%), Gaps = 27/120 (22%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEE---FINEVACISGTSHVNIVTPLGICC 95
           +G +G VY     + G + AVK +  S  + EE      E+  +S   H NIV   G   
Sbjct: 10  RGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSER 69

Query: 96  E------GLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVG-----VARGLECL 144
           +       +  E++S GSL   +   G             L E V+      +  GL  L
Sbjct: 70  DEEKNTLNIFLEYVSGGSLSSLLKKFGK------------LPEPVIRKYTRQILEGLAYL 117

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 48.0 bits (115), Expect = 3e-07
 Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 6/79 (7%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKVLS-ESMGNGEEFINEVACISGTSHVNIVTPLG- 92
           +K+ +GG+G VY+ +    G+  A+KV+  ES    E+ INE+  +    H NIV   G 
Sbjct: 6   EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGS 65

Query: 93  ICCEG---LVYEFMSNGSL 108
              +    +V EF S GSL
Sbjct: 66  YLKKDELWIVMEFCSGGSL 84

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 47.9 bits (114), Expect = 3e-07
 Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 23/119 (19%)

Query: 40  QGGYGVVYRGKLHEG----RVAAVKVLS--ESMGNGEEFINEVACISGTSHVNIVTPLGI 93
           +G +G VY G L +        AVK L+    +   E+F+ E   +   SH N+++ LGI
Sbjct: 5   KGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGI 64

Query: 94  CC--EGL---VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIV---VGVARGLECL 144
           C   EG    V  +M +G L  FI      S  +N     T+ +++   + VA+G+E L
Sbjct: 65  CLPSEGSPLVVLPYMKHGDLRNFI-----RSETHN----PTVKDLIGFGLQVAKGMEYL 114

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 47.3 bits (113), Expect = 5e-07
 Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 16/112 (14%)

Query: 38  VRQGGYGVVYRGKLHEGRVAAVKVLSES--MGNGEEFINEVACISGTSHVNIVTPLGICC 95
           V +G    VY  K  +    AVK L +       +EF+ E + ++   H  IV  +G+C 
Sbjct: 11  VVKG----VYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK 66

Query: 96  EG---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
                LV E    G L K++  +  +   +       L E+   VA G+  L
Sbjct: 67  GEPLMLVMELAPLGPLLKYLKKRREIPVSD-------LKELAHQVAMGMAYL 111

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 46.3 bits (110), Expect = 1e-06
 Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 14/118 (11%)

Query: 40  QGGYGVVYRGKLHEGRVA-------AVKVLSESMGNGEE--FINEVACISGTSHVNIVTP 90
            G +G VY G L+ GR         AVK L ES    +E  F+ E   +S  +H NIV  
Sbjct: 16  HGAFGEVYEG-LYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRL 74

Query: 91  LGICCEGLVY----EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           +G+  E L      E M+ G L  F+ +      + + L    L      VA+G + L
Sbjct: 75  IGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYL 132

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 45.6 bits (108), Expect = 2e-06
 Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 10/116 (8%)

Query: 33  SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLG 92
           +F  ++  G +GVV  GK       A+K++ E   + +EFI E   +   SH  +V   G
Sbjct: 7   TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYG 66

Query: 93  ICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           +C +     +V E+MSNG L  ++ + G       R + + L E+   V  G+  L
Sbjct: 67  VCTKQRPIYIVTEYMSNGCLLNYLREHG------KRFQPSQLLEMCKDVCEGMAYL 116

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 14/90 (15%)

Query: 34  FSDKVRQGGYGVVYRG-KLHEGRVAAVK------VLSESMGNGEEFINEVACISGTSHVN 86
             D + +G +GVVY+G  L  G   A+K      +  E++   +  + E+  +    H N
Sbjct: 4   LGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEAL---KSIMQEIDLLKNLKHPN 60

Query: 87  IVTPLGICCEG----LVYEFMSNGSLHKFI 112
           IV  +G         ++ E+  NGSL + I
Sbjct: 61  IVKYIGSIETSDSLYIILEYAENGSLRQII 90

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 45.2 bits (108), Expect = 3e-06
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 13/87 (14%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEFIN-----EVACISGTSHVNIVT 89
           +K+ +G YGVVY+ +    G + A+K +   + N EE I      E++ +    H NIV 
Sbjct: 5   EKLGEGTYGVVYKARDKKTGEIVALKKI--RLDNEEEGIPSTALREISLLKELKHPNIVK 62

Query: 90  PLGICCEG----LVYEFMSNGSLHKFI 112
            L +        LV+E+     L K++
Sbjct: 63  LLDVIHTERKLYLVFEYCDM-DLKKYL 88

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 44.8 bits (106), Expect = 3e-06
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 12/85 (14%)

Query: 40  QGGYGVVYRGK---LHEGR---VAAVKVLSE--SMGNGEEFINEVACISGTSHVNIVTPL 91
           QG +G V++ +   L       + AVK+L E  S     +F  E A ++   H NIV  L
Sbjct: 15  QGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLL 74

Query: 92  GICCEG----LVYEFMSNGSLHKFI 112
           G+C  G    L++E+M+ G L++F+
Sbjct: 75  GVCAVGKPMCLLFEYMAYGDLNEFL 99

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 44.8 bits (106), Expect = 4e-06
 Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 15/114 (13%)

Query: 41  GGYGVVYRGKL--------HEGRVAAVKVLSESMGNGE--EFINEVACISGTSHVNIVTP 90
           G +G VY G             RVA VK L +   + E  EF+ E   +S  +H NIV  
Sbjct: 6   GAFGEVYEGTATDILGPGSGPIRVA-VKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKL 64

Query: 91  LGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARG 140
           LG+C       ++ E M  G L  ++ D          L    L +I + VA+G
Sbjct: 65  LGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKG 118

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 44.3 bits (105), Expect = 5e-06
 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 37  KVRQGGYGVVYRGKLHEGRVAAVKVL-SESMGNGEEFINEVACISGTSHVNIVTPLGICC 95
           K+  G +G V+ G        A+K+L S+ +   ++F  EV  +    H ++++   +C 
Sbjct: 13  KLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCS 72

Query: 96  EG----LVYEFMSNGSLHKFI 112
            G    ++ E M  GSL  F+
Sbjct: 73  VGEPVYIITELMEKGSLLAFL 93

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 42.9 bits (101), Expect = 1e-05
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 33  SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLG 92
           +F  ++  G +GVV+ GK       A+K ++E   + E+FI E   +   SH  +V   G
Sbjct: 7   TFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYG 66

Query: 93  ICCEG----LVYEFMSNGSLHKFIYDK 115
           +C +     +V EFM NG L  ++  +
Sbjct: 67  VCTQQKPLYIVTEFMENGCLLNYLRQR 93

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 11/88 (12%)

Query: 40  QGGYGVVYRGKLH------EGRVAAVKVLSESMGNG-EEFINEVACISGTSHVNIVTPLG 92
           +G +G V+  + H      +  + AVK L E+  +  ++F  E   ++   H +IV   G
Sbjct: 15  EGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYG 74

Query: 93  ICCEG----LVYEFMSNGSLHKFIYDKG 116
           +C EG    +V+E+M +G L++F+   G
Sbjct: 75  VCTEGRPLLMVFEYMRHGDLNRFLRSHG 102

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 41.9 bits (98), Expect = 4e-05
 Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 21/132 (15%)

Query: 34  FSDKVRQGGYGVVYRGKLH-----EGRVAAVKVLSE--SMGNGEEFINEVACISGTSHVN 86
           F +++ +  +G +Y+G L+       ++ A+K L +  +     EF  E + ++   H N
Sbjct: 9   FMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPN 68

Query: 87  IVTPLGICCEG----LVYEFMSNGSLHKFIY------DKGSMS----TKNNRLEWTTLSE 132
           IV  LG+  +     +++E+++ G LH+F+       D G  S    T  + L+      
Sbjct: 69  IVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLH 128

Query: 133 IVVGVARGLECL 144
           I + +A G+E L
Sbjct: 129 IAIQIAAGMEYL 140

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 41.6 bits (97), Expect = 4e-05
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 11/101 (10%)

Query: 27  VKKMTNSFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMGNG-EEFINEVACI 79
           +K+       ++ +G +G V+  + +      +  + AVK L ++  N  ++F  E   +
Sbjct: 2   IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL 61

Query: 80  SGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKG 116
           +   H +IV   G+C EG    +V+E+M +G L+KF+   G
Sbjct: 62  TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHG 102

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 41.6 bits (98), Expect = 5e-05
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 10/78 (12%)

Query: 41  GGYGVVYRGK-LHEGRVA----AVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGI 93
           G +G VY+G  + EG       A+KVL E       +E ++E   ++   H ++V  LGI
Sbjct: 18  GAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGI 77

Query: 94  CCEG---LVYEFMSNGSL 108
           C      L+ + M  G L
Sbjct: 78  CLSSQVQLITQLMPLGCL 95

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 41.6 bits (97), Expect = 6e-05
 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 8/108 (7%)

Query: 37  KVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCE 96
           K+ QG +G V+ G  +     A+K L     + E F+ E   +    H  +V    +  E
Sbjct: 13  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 72

Query: 97  GLVY---EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGL 141
             +Y   E+MS GSL  F+  KG M      L    L ++   +A G+
Sbjct: 73  EPIYIVTEYMSKGSLLDFL--KGEMGK---YLRLPQLVDMAAQIASGM 115

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 41.6 bits (97), Expect = 6e-05
 Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 16/111 (14%)

Query: 41  GGYGVVYRGK-LHEGRVA----AVKVLSESMGNGE--EFINEVACISGTSHVNIVTPLGI 93
           G +G VY+G  + EG       A+K+L+E+ G     EF++E   ++   H ++V  LG+
Sbjct: 18  GAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGV 77

Query: 94  CCE---GLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGL 141
           C      LV + M +G L  ++++          L W       V +A+G+
Sbjct: 78  CLSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNW------CVQIAKGM 122

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 41.2 bits (96), Expect = 6e-05
 Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 19/122 (15%)

Query: 40  QGGYGVVYRGKLHEGR------VAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGI 93
           +G +G V  G+L++        V  +K+   +    E+F++E  C+    H N++  +G+
Sbjct: 9   EGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGV 68

Query: 94  CCEG----------LVYEFMSNGSLHKF-IYDKGSMSTKNNRLEWTTLSEIVVGVARGLE 142
           C +           ++  FM +G LH F +Y +  +      L    L + +  +A G+E
Sbjct: 69  CLQTVESEGYPSPVVILPFMKHGDLHSFLLYSR--LGDCPQYLPTQMLVKFMTDIASGME 126

Query: 143 CL 144
            L
Sbjct: 127 YL 128

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 40.8 bits (96), Expect = 8e-05
 Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 17/120 (14%)

Query: 36  DKVRQGG-YGVVYRGKLHE-GR---VAAVKVLSESMGNGE--EFINEVACISGTSHVNIV 88
           +KV  GG +G V RG+L   G+     A+K L     + +  +F+ E + +    H NI+
Sbjct: 9   EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNII 68

Query: 89  TPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
              G+  +     ++ E+M NGSL KF      +   + +     L  ++ G+A G++ L
Sbjct: 69  RLEGVVTKSRPVMIITEYMENGSLDKF------LRENDGKFTVGQLVGMLRGIASGMKYL 122

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 40.7 bits (95), Expect = 1e-04
 Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 26  DVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHV 85
           +++K+T    + + +G +G V +G+ + G+  AVK +   +   + F+ E A ++   H 
Sbjct: 4   NLQKLT--LGEIIGEGEFGAVLQGE-YTGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHK 59

Query: 86  NIVTPLG-ICCEGL--VYEFMSNGSLHKFIYDKG 116
           N+V  LG I   GL  V E MS G+L  F+  +G
Sbjct: 60  NLVRLLGVILHNGLYIVMELMSKGNLVNFLRTRG 93

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 21/135 (15%)

Query: 31  TNSFSDKVRQGGYGVVYRGKL------HEGRVAAVKVLSESMGNG--EEFINEVACISGT 82
           T  F +++ +  +G VY+G L       + +  A+K L +       EEF +E    S  
Sbjct: 6   TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRL 65

Query: 83  SHVNIVTPLGICCE----GLVYEFMSNGSLHKFIY------DKGSMS---TKNNRLEWTT 129
            H NIV  LG+  +     +++ + S+  LH+F+       D GS     T  + LE   
Sbjct: 66  QHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPAD 125

Query: 130 LSEIVVGVARGLECL 144
              IV  +A G+E L
Sbjct: 126 FVHIVTQIAAGMEFL 140

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 40.3 bits (94), Expect = 1e-04
 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 14/108 (12%)

Query: 40  QGGYGVVYRGKLH-------EGRVAAVKVLSESMGNGE--EFINEVACISGTSHVNIVTP 90
           QG +G+VY G          E RVA VK ++ES    E  EF+NE + + G +  ++V  
Sbjct: 16  QGSFGMVYEGNARDIIKGEAETRVA-VKTVNESASLRERIEFLNEASVMKGFTCHHVVRL 74

Query: 91  LGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIV 134
           LG+  +G    +V E M++G L  ++      +  N      TL E++
Sbjct: 75  LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 122

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 14/82 (17%)

Query: 40  QGGYGVVYRGKLH-------EGRVAAVKVLSE--SMGNGEEFINEVACISGTSHVNIVTP 90
           QG +G+VY G          E RV A+K ++E  SM    EF+NE + +   +  ++V  
Sbjct: 16  QGSFGMVYEGLAKGVVKGEPETRV-AIKTVNENASMRERIEFLNEASVMKEFNCHHVVRL 74

Query: 91  LGICCEG----LVYEFMSNGSL 108
           LG+   G    +V E M+ G L
Sbjct: 75  LGVVSTGQPTLVVMELMAKGDL 96

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 13/116 (11%)

Query: 36  DKVRQGGYGVVYRGKLH-EGRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLG 92
           +++ +G +G V+ G+L  +    AVK   E++      +F+ E   +   SH NIV  +G
Sbjct: 1   ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 60

Query: 93  ICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           +C +     +V E +  G    F+  +G       RL+   L ++V   A G+E L
Sbjct: 61  VCTQKQPIYIVMELVQGGDFLTFLRTEGP------RLKVKELIQMVENAAAGMEYL 110

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 9/85 (10%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKVL---SESMGNGEEFINEVACISGTSHVNIVTPL 91
           +K+ +G YGVVY+ +    G V A+K +   +E+ G     I E++ +   +H NIV  L
Sbjct: 6   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 65

Query: 92  GICCEG----LVYEFMSNGSLHKFI 112
            +        LV+EF+ +  L KF+
Sbjct: 66  DVIHTENKLYLVFEFL-HQDLKKFM 89

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 39.2 bits (92), Expect = 3e-04
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 37  KVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCE 96
           K+  G +G V+ G  +     AVK L     + E F+ E   +    H  +V    +C E
Sbjct: 13  KLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSE 72

Query: 97  G----LVYEFMSNGSLHKFIYD 114
                +V E+MS GSL  F+  
Sbjct: 73  EEPIYIVTEYMSKGSLLDFLKS 94

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 39.7 bits (91), Expect = 3e-04
 Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 11/108 (10%)

Query: 40  QGGYGVVYRGKLHEGRVAAVKVLSESMGN----GEEFINEVACISGTSHVNIVTPLGICC 95
           +G +G VY  +    ++ A+KVL++ + +     E F+ E+  ++  +H   +  L    
Sbjct: 10  EGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFF 67

Query: 96  EG-----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVA 138
           +      LV E++  GSL   +   G     +       L++I+  + 
Sbjct: 68  QDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALE 115

Length = 384

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 39.3 bits (91), Expect = 3e-04
 Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 17/119 (14%)

Query: 38  VRQGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEFINEVACISGTS-HVNIVTPLGICC 95
           V  G YG VY+G+ +  G++AA+KV+  +    EE   E+  +   S H NI T  G   
Sbjct: 14  VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 73

Query: 96  EG----------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           +           LV EF   GS+   I +     TK N L+   ++ I   + RGL  L
Sbjct: 74  KKNPPGMDDQLWLVMEFCGAGSVTDLIKN-----TKGNTLKEEWIAYICREILRGLSHL 127

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 28/124 (22%), Positives = 58/124 (46%), Gaps = 15/124 (12%)

Query: 35  SDKVRQGGYGVVYRGKLHEGRVAAVK-VLSESMGNGEE------FINEVACISGTSHVNI 87
           SD +++G +G ++ G L + +    + V  +++ +          + E   + G SH NI
Sbjct: 11  SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNI 70

Query: 88  VTPLGICCEG-----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTT--LSEIVVGVARG 140
           +  L +C E      ++Y +M+ G+L  F+  +  +   NN    +T  L  + + +A G
Sbjct: 71  LPILHVCIEDGEPPFVLYPYMNWGNLKLFL-QQCRLGEANNPQALSTQQLVHMAIQIACG 129

Query: 141 LECL 144
           +  L
Sbjct: 130 MSYL 133

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 39.2 bits (91), Expect = 3e-04
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 3/81 (3%)

Query: 37  KVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCE 96
           K+  G +G V+ G  +     AVK L     + E F+ E   +    H  +V    +  E
Sbjct: 13  KLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSE 72

Query: 97  GLVY---EFMSNGSLHKFIYD 114
             +Y   E+MS GSL  F+ D
Sbjct: 73  EPIYIVTEYMSKGSLLDFLKD 93

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 39.1 bits (91), Expect = 4e-04
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 11/84 (13%)

Query: 40  QGGYGVVYRGKLHEGRVAAVKVLSESMGNG-------EEFINEVACISGTSHVNIVTPLG 92
           +G YG VY G  ++G++ AVK +     N        E+   EV  +    HVNIV  LG
Sbjct: 10  KGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLG 69

Query: 93  ICCE----GLVYEFMSNGSLHKFI 112
            C +     +  EF+  GS+   +
Sbjct: 70  TCLDDNTISIFMEFVPGGSISSIL 93

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 38.9 bits (90), Expect = 4e-04
 Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 6/89 (6%)

Query: 37  KVRQGGYGVVYRG-KLHEGRVAAVKVLSESMGNGEEFI-NEVACISGTSHVNIVTPLG-- 92
           +V  G YG VY+   LH G +AAVK++    G+    I  E+  +    H NIV   G  
Sbjct: 16  RVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSY 75

Query: 93  ICCEGL--VYEFMSNGSLHKFIYDKGSMS 119
           +  E L    E+   GSL    +  G +S
Sbjct: 76  LSREKLWICMEYCGGGSLQDIYHVTGPLS 104

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 38.6 bits (90), Expect = 5e-04
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 8/77 (10%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKVL---SESMGNGEEFINEVACISGTSHVNIVTPL 91
           +K+ +G YGVVY+G+    G++ A+K +   SE  G     I E++ +    H NIV   
Sbjct: 6   EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQ 65

Query: 92  GICCEG----LVYEFMS 104
            +  +     L++EF+S
Sbjct: 66  DVLMQESRLYLIFEFLS 82

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 38.5 bits (90), Expect = 5e-04
 Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 9/89 (10%)

Query: 31  TNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVL--SESMGNGEEFINEVACISGTSHVNIV 88
            +   D   +               + AVKVL    S    E+F+ EV  +S  S  NI 
Sbjct: 26  ADGLQDFSEKAFAENDNAD---APVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIA 82

Query: 89  TPLGICCEG----LVYEFMSNGSLHKFIY 113
             LG+C       ++ E+M NG L++F+ 
Sbjct: 83  RLLGVCTVDPPLCMIMEYMENGDLNQFLQ 111

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 38.6 bits (90), Expect = 6e-04
 Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 11/88 (12%)

Query: 41  GGYGVVYRG-KLHEGRVAAVKV--LSESMGNGEEFIN----EVACISGTSHVNIVTPLGI 93
           G +G VY G  L +G   AVK   L++    G+E +     E+A +S   H NIV  LG 
Sbjct: 11  GSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGT 70

Query: 94  CCEG----LVYEFMSNGSLHKFIYDKGS 117
             E     +  E +  GSL K +   GS
Sbjct: 71  EREEDNLYIFLELVPGGSLAKLLKKYGS 98

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 38.4 bits (89), Expect = 7e-04
 Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 11/88 (12%)

Query: 40  QGGYGVVYRGKLH------EGRVAAVKVLSE-SMGNGEEFINEVACISGTSHVNIVTPLG 92
           +G +G V+  + +      +  + AVK L + ++   ++F  E   ++   H +IV   G
Sbjct: 15  EGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYG 74

Query: 93  ICCEG----LVYEFMSNGSLHKFIYDKG 116
           +C +G    +V+E+M +G L+KF+   G
Sbjct: 75  VCGDGDPLIMVFEYMKHGDLNKFLRAHG 102

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 38.0 bits (89), Expect = 8e-04
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 5/78 (6%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGIC 94
           +K+ +G  G VY+      G+  A+K +     N E  INE+  +    H NIV      
Sbjct: 25  EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSY 84

Query: 95  CEG----LVYEFMSNGSL 108
             G    +V E+M  GSL
Sbjct: 85  LVGDELWVVMEYMDGGSL 102

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 17/121 (14%)

Query: 38  VRQGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEFINEVACISGTS-HVNIVTPLGICC 95
           V  G YG VY+G+ +  G++AA+KV+  +    EE   E+  +   S H NI T  G   
Sbjct: 24  VGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFI 83

Query: 96  EG----------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLI 145
           +           LV EF   GS+   +      +TK N L+   ++ I   + RGL  L 
Sbjct: 84  KKSPPGHDDQLWLVMEFCGAGSVTDLV-----KNTKGNALKEDWIAYICREILRGLAHLH 138

Query: 146 A 146
           A
Sbjct: 139 A 139

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 37.7 bits (88), Expect = 0.001
 Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 10/91 (10%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKV--LSESMGNGEEFINEVACISGTSHVNIVTPLG 92
           + +  G   VVY    L      A+K   L +   + +E   EV  +S  +H N+V    
Sbjct: 7   EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYT 66

Query: 93  ICCEG----LVYEFMSNGSLH---KFIYDKG 116
               G    LV  ++S GSL    K  Y +G
Sbjct: 67  SFVVGDELWLVMPYLSGGSLLDIMKSSYPRG 97

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 37.6 bits (87), Expect = 0.001
 Identities = 25/104 (24%), Positives = 52/104 (50%), Gaps = 11/104 (10%)

Query: 52  HEGRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN 105
            +  + AVK+L   +      +F+ E+  +S   + NI+  LG+C       ++ E+M N
Sbjct: 42  GQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMEN 101

Query: 106 GSLHKFIYDKG--SMSTKNNRLEWTTLSEIV---VGVARGLECL 144
           G L++F+  +   S  T  N +   +++ ++   V +A G++ L
Sbjct: 102 GDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYL 145

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 37.0 bits (86), Expect = 0.002
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 11/117 (9%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKVL---SESMGNGEEFINEVACISGTSHVNIV--- 88
            K+ +G YG VY+ K L + +  A+K +   S S    E+ +NE+  ++  +H NI+   
Sbjct: 6   KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYK 65

Query: 89  -TPLGICCEGLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
              L      +V E+   G L K I  K     K   +    +  I + + RGL+ L
Sbjct: 66  EAFLDGNKLCIVMEYAPFGDLSKAI-SKRKK--KRKLIPEQEIWRIFIQLLRGLQAL 119

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 36.8 bits (86), Expect = 0.002
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 12/91 (13%)

Query: 36  DKVRQGGYGVVYRGKLHE-GRVAAVK-VLSESMGNGEEFIN-----EVACISGTSHVNIV 88
            K+ +G Y VVY+ +  E GR+ A+K +        ++ IN     E+  +    H NI+
Sbjct: 6   KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNII 65

Query: 89  TPLGICCEG----LVYEFMSNGSLHKFIYDK 115
             L +        LV+EFM    L K I DK
Sbjct: 66  GLLDVFGHKSNINLVFEFME-TDLEKVIKDK 95

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 36.6 bits (85), Expect = 0.003
 Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 9/98 (9%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEF--INEVACISGTSHVNIVTPLG 92
           DK+ +G Y  VY+G+    G++ A+K +      G  F  I E + +    H NIVT   
Sbjct: 11  DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHD 70

Query: 93  IC----CEGLVYEFMSNGSLHKFIYDKGS-MSTKNNRL 125
           I        LV+E++    L +++ D G  +S  N RL
Sbjct: 71  IIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRL 107

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 36.4 bits (85), Expect = 0.003
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 15/115 (13%)

Query: 37  KVRQGGYGVVYRG-KLHEGRVAAVKV--LSESMGNGEEFINEVACISGTSHVNIVTPLGI 93
            + +G +G VY+       +V A+KV  L E+    E+   E+  +S      I    G 
Sbjct: 8   CIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGS 67

Query: 94  CCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
             +G    ++ E+   GS    +        K  +L+ T ++ I+  V  GLE L
Sbjct: 68  FLKGSKLWIIMEYCGGGSCLDLL--------KPGKLDETYIAFILREVLLGLEYL 114

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 37  KVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCE 96
           K+ QG +G V+ G  +     A+K L       E F+ E   +    H  +V    +  E
Sbjct: 13  KLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE 72

Query: 97  GLVY---EFMSNGSLHKFI 112
             +Y   EFM  GSL  F+
Sbjct: 73  EPIYIVTEFMGKGSLLDFL 91

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 36 DKVRQGGYGVVYRGKLH-EGRVAAVKV--LSESMGNGEEFINEVACISGTSHVNIV 88
          +K+ +G Y  VY+GK    G++ A+KV  L E  G     I E + + G  H NIV
Sbjct: 11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIV 66

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 6/82 (7%)

Query: 40  QGGYGVVYRGKLHEGRVAAVKVLSESMGNGEE--FINEVACISGTSHVNIVTPLGICCEG 97
           +G +G V++G L +    AVK   E +    +  F++E   +    H NIV  +G+C + 
Sbjct: 5   KGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQR 64

Query: 98  ----LVYEFMSNGSLHKFIYDK 115
               +V E +  G    F+  K
Sbjct: 65  QPIYIVMELVPGGDFLSFLRKK 86

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 35.8 bits (83), Expect = 0.004
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 8/82 (9%)

Query: 35  SDKVRQGGYGVVYRG-KLHEGRVAAVKVLS---ESMGNGEEFINEVACISGTSHVNIVTP 90
            +K+  G +G VY    L  G + AVK +          +E  +E+  +    H N+V  
Sbjct: 5   GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKY 64

Query: 91  LGICCE-GLVYEFM---SNGSL 108
            G+      VY FM   S G+L
Sbjct: 65  YGVEVHREKVYIFMEYCSGGTL 86

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	156
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.93
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.9
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.9
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.88
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.86
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.86
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.86
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.86
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.85
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.85
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.84
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.84
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.83
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.83
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.82
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.81
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.8
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.8
KOG0198	313	consensus MEKK and related serine/threonine protei	99.79
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.78
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.78
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.78
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.78
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.78
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.78
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.78
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.77
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.77
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.77
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.77
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.77
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.77
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.77
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.77
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.77
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.77
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.76
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.76
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.76
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.76
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.76
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.76
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.76
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.76
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.76
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.76
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.76
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.76
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.76
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.76
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.76
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.76
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.76
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.76
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.76
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.76
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.76
KOG0605	550	consensus NDR and related serine/threonine kinases	99.76
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.75
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.75
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.75
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.75
KOG0589	426	consensus Serine/threonine protein kinase [General	99.75
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.75
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.75
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.75
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.75
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.75
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.75
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.75
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.75
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.74
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.74
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.74
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.74
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.74
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.74
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.74
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.74
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.74
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.74
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.74
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.74
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.74
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.73
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.73
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.73
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.73
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.73
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.73
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.73
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.73
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.73
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.73
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.73
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.73
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.72
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.72
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.72
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.72
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.72
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.72
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.72
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.72
KOG0578	550	consensus p21-activated serine/threonine protein k	99.72
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.72
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.72
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.72
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.72
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.72
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.72
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.72
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.72
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.72
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.72
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.71
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.71
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.71
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.71
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.71
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.71
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.71
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.71
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.71
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.71
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.71
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.71
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.71
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.71
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.71
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.71
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.71
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.71
KOG0586	596	consensus Serine/threonine protein kinase [General	99.71
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.71
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.71
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.71
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.7
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.7
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.7
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.7
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.7
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.7
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.7
KOG0584	632	consensus Serine/threonine protein kinase [General	99.7
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.7
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.7
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.7
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.7
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.7
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.7
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.7
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.7
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.7
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.7
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.7
PHA02988	283	hypothetical protein; Provisional	99.7
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.69
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.69
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.69
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.69
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.69
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.69
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.69
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.69
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.69
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.69
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.69
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.69
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.69
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.69
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.69
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.69
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.69
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.69
KOG0610	459	consensus Putative serine/threonine protein kinase	99.69
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.69
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.69
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.69
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.69
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.69
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.69
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.68
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.68
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.68
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.68
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.68
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.68
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.68
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.68
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.68
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.68
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.68
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.68
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.68
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.68
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.68
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.68
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.68
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.68
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.68
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.68
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.68
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.68
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.68
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.68
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.68
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.68
PHA03212	391	serine/threonine kinase US3; Provisional	99.68
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.68
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.68
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.68
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.67
PTZ00267	478	NIMA-related protein kinase; Provisional	99.67
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.67
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.67
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.67
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.67
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.67
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.67
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.67
PTZ00283	496	serine/threonine protein kinase; Provisional	99.67
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.67
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.67
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.67
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.67
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.67
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.67
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.67
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.67
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.67
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.67
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.67
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.67
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.66
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.66
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.66
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.66
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.66
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.66
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.66
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.66
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.66
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.66
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.66
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.66
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.66
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.66
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.66
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.66
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.66
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.66
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.66
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.66
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.66
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.66
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.65
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.65
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.65
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.65
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.65
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.65
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.65
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.65
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.65
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.65
PTZ00036	440	glycogen synthase kinase; Provisional	99.65
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.65
PHA03209	357	serine/threonine kinase US3; Provisional	99.65
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.65
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.65
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.65
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.65
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.64
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.64
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.64
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.64
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.64
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.64
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.64
PHA03211	461	serine/threonine kinase US3; Provisional	99.64
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.64
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.63
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.63
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.63
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.63
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.63
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.63
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.63
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.63
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.63
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.63
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.63
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.63
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.63
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.62
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.62
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.62
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.62
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.62
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.62
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.62
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.62
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.62
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.62
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.62
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.62
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.62
PHA03207	392	serine/threonine kinase US3; Provisional	99.61
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.61
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.61
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.61
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.61
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.61
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.61
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.61
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.61
PLN00009	294	cyclin-dependent kinase A; Provisional	99.61
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.6
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.6
KOG3653	534	consensus Transforming growth factor beta/activin	99.6
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.6
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.6
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.6
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.6
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.6
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.6
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.6
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.6
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.59
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.59
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.59
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.59
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.59
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.59
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.59
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.59
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.58
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.58
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.58
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.58
PTZ00284	467	protein kinase; Provisional	99.58
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.58
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.58
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.57
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.57
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.57
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.56
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.56
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.56
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.56
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.56
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.55
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.55
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.55
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.55
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.55
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.54
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.54
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.54
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.53
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.53
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.52
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.52
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.52
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.51
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.51
KOG1152	772	consensus Signal transduction serine/threonine kin	99.51
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.5
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.5
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.49
PRK09188	365	serine/threonine protein kinase; Provisional	99.49
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.49
PRK10345	210	hypothetical protein; Provisional	99.49
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.48
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.48
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.48
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.47
PHA03210	501	serine/threonine kinase US3; Provisional	99.47
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.46
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.46
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.46
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.43
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.4
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.38
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.37
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.35
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.31
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.31
PHA02882	294	putative serine/threonine kinase; Provisional	99.31
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.3
smart00090	237	RIO RIO-like kinase.	99.29
PRK14879	211	serine/threonine protein kinase; Provisional	99.28
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.25
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.23
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.22
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.2
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.2
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.18
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.16
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.15
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.15
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.14
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.14
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.11
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.11
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.09
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.09
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.09
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.05
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.04
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.02
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.0
PRK12274	218	serine/threonine protein kinase; Provisional	99.0
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	98.98
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.93
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	98.88
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.86
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.74
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	98.72
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.64
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.63
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	98.53
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.32
KOG3087	229	consensus Serine/threonine protein kinase [General	98.2
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.2
PLN00181	793	protein SPA1-RELATED; Provisional	98.16
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.14
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.14
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.0
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	97.98
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	97.87
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	97.83
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.68
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.63
KOG1266	458	consensus Protein kinase [Signal transduction mech	97.46
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	97.36
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.34
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	97.23
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	97.18
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.01
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	96.78
KOG0590	601	consensus Checkpoint kinase and related serine/thr	96.62
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	96.6
KOG1243	690	consensus Protein kinase [General function predict	96.44
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	96.28
KOG1235	538	consensus Predicted unusual protein kinase [Genera	96.15
PLN02876	822	acyl-CoA dehydrogenase	96.13
PRK10593	297	hypothetical protein; Provisional	96.01
COG0478	304	RIO-like serine/threonine protein kinase fused to	95.87
PRK09902	216	hypothetical protein; Provisional	95.79
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	95.74
PF01636	239	APH: Phosphotransferase enzyme family This family	95.68
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	94.68
COG0661	517	AarF Predicted unusual protein kinase [General fun	94.43
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	94.36
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	94.33
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	94.26
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	93.95
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	93.34
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	93.02
PRK09550	401	mtnK methylthioribose kinase; Reviewed	92.48
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	92.4
KOG2270	520	consensus Serine/threonine protein kinase involved	90.07
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	89.26
PF04655	253	APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r	82.65
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	81.94
KOG0576	829	consensus Mitogen-activated protein kinase kinase	80.02

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=7.4e-25  Score=158.57  Aligned_cols=133  Identities=42%  Similarity=0.729  Sum_probs=118.2

Q ss_pred             CCCCCChHHHHhhhhhhh--hccccccCceEEEEEeCCCcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceee
Q 047548           18 APKGYNYSDVKKMTNSFS--DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGIC   94 (156)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~   94 (156)
                      ....|++.++..++.+|.  ..||+|+||.||+|...++..||+|.+...... .+.|.+|+.++..++|+|++++.|+|
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            456789999999999998  589999999999999988889999988765544 56699999999999999999999999


Q ss_pred             ecc-----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC---CCCcccc
Q 047548           95 CEG-----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA---TLGLCIS  155 (156)
Q Consensus        95 ~~~-----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~---~~h~~i~  155 (156)
                      .+.     +|+||+++|+|.+.|.....    . .++|..+.+|+.++|+||+|||...   ++|+||.
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~----~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiK  204 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKG----E-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIK  204 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCC----C-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCC
Confidence            943     99999999999999987531    1 6899999999999999999999976   8899985

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.90  E-value=2e-23  Score=148.03  Aligned_cols=114  Identities=26%  Similarity=0.428  Sum_probs=101.7

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.||.|+|+.||+|+++. +..||+|.+.......   +.+..|+++|+.++|+||+.+.+++..+    +|||||.+
T Consensus        14 ~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~g   93 (429)
T KOG0595|consen   14 LSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNG   93 (429)
T ss_pred             ehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCC
Confidence            34569999999999999876 8899999997653222   5688999999999999999999999887    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      |+|..+++..+       .+++.....++.|++.||++||+++++|+|+
T Consensus        94 GDLs~yi~~~~-------~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDL  135 (429)
T KOG0595|consen   94 GDLSDYIRRRG-------RLPEATARHFMQQLASALQFLHENNIIHRDL  135 (429)
T ss_pred             CCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence            99999998753       4889999999999999999999999999997

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.90  E-value=1.4e-23  Score=152.77  Aligned_cols=129  Identities=21%  Similarity=0.370  Sum_probs=115.6

Q ss_pred             CChHHHHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----
Q 047548           22 YNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----   97 (156)
Q Consensus        22 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----   97 (156)
                      ...+++++....+.+.||+|.||.||.|.+.+...||+|.++......+.|.+|+.+++.++|++|++++++|...    
T Consensus       198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piy  277 (468)
T KOG0197|consen  198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIY  277 (468)
T ss_pred             cCCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceE
Confidence            4556777777788899999999999999998887999999998766668899999999999999999999999985    


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|+||++.|+|.++|+...     ...+...+++.++.|||+||+||.+++.+|+|+-
T Consensus       278 IVtE~m~~GsLl~yLr~~~-----~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLA  330 (468)
T KOG0197|consen  278 IVTEYMPKGSLLDYLRTRE-----GGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLA  330 (468)
T ss_pred             EEEEecccCcHHHHhhhcC-----CCccchHHHHHHHHHHHHHHHHHHhCCccchhhh
Confidence            9999999999999998732     4557889999999999999999999999999963

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.88  E-value=7e-22  Score=142.67  Aligned_cols=125  Identities=27%  Similarity=0.440  Sum_probs=105.9

Q ss_pred             HHHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc-----
Q 047548           26 DVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG-----   97 (156)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----   97 (156)
                      .+......+.+.+|+|+||+||++.+++...||+|.+......   .+.|.+|+.++..++||||+++.|+|..+     
T Consensus        37 ~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~  116 (362)
T KOG0192|consen   37 EIDPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLC  116 (362)
T ss_pred             ecChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceE
Confidence            3333334455679999999999999986555999999864433   35899999999999999999999999986     


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-CCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA-TLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~-~~h~~i~  155 (156)
                      +|+||+++|+|.+++....     ...++...++.++.||+.||.|||+.. ++|+|+-
T Consensus       117 iVtEy~~~GsL~~~l~~~~-----~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK  170 (362)
T KOG0192|consen  117 IVTEYMPGGSLSVLLHKKR-----KRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLK  170 (362)
T ss_pred             EEEEeCCCCcHHHHHhhcc-----cCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccC
Confidence            9999999999999997731     456899999999999999999999999 8999973

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.86  E-value=3.8e-22  Score=147.56  Aligned_cols=127  Identities=24%  Similarity=0.404  Sum_probs=110.5

Q ss_pred             CChHHHHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc-
Q 047548           22 YNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG-   97 (156)
Q Consensus        22 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~-   97 (156)
                      ...|+++..-..+...||+|.||+||+|.|.  ..||||.+.......   +.|.+|+..++..+|.||+-++|+|..+ 
T Consensus       384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~  461 (678)
T KOG0193|consen  384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP  461 (678)
T ss_pred             ccccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence            3556776666667789999999999999985  468999998644333   6899999999999999999999999998 


Q ss_pred             --eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccC
Q 047548           98 --LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIST  156 (156)
Q Consensus        98 --lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~~  156 (156)
                        ++..|++|-+|+.+++..      ...+....+..|+.||++||+|||.++++|.|..|
T Consensus       462 ~AIiTqwCeGsSLY~hlHv~------etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKS  516 (678)
T KOG0193|consen  462 LAIITQWCEGSSLYTHLHVQ------ETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKS  516 (678)
T ss_pred             eeeeehhccCchhhhhccch------hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccc
Confidence              899999999999999875      45588899999999999999999999999999864

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.86  E-value=9.2e-22  Score=144.77  Aligned_cols=125  Identities=27%  Similarity=0.376  Sum_probs=104.2

Q ss_pred             HHHHhhhhhhhhccccccCceEEEEEeCC--C--cE-EEEEecccCC-CC---hHHHHHHHHHHcCCCCCCccccceeee
Q 047548           25 SDVKKMTNSFSDKVRQGGYGVVYRGKLHE--G--RV-AAVKVLSESM-GN---GEEFINEVACISGTSHVNIVTPLGICC   95 (156)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~--~--~~-~a~k~~~~~~-~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~   95 (156)
                      |++....-.+.++||+|+||.||+|.+..  +  .. ||+|..+... ..   ...+++|+++++.++|+|+++++|+..
T Consensus       152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~  231 (474)
T KOG0194|consen  152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV  231 (474)
T ss_pred             cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence            45555555666899999999999999754  2  23 7999887522 11   267999999999999999999999888


Q ss_pred             cc----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           96 EG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        96 ~~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ..    ++||++++|+|.++|+...      ..++......++.+++.||+|||+++++|+||-
T Consensus       232 ~~~Pl~ivmEl~~gGsL~~~L~k~~------~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIA  289 (474)
T KOG0194|consen  232 LEEPLMLVMELCNGGSLDDYLKKNK------KSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIA  289 (474)
T ss_pred             CCCccEEEEEecCCCcHHHHHHhCC------CCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHh
Confidence            76    9999999999999998752      248899999999999999999999999999983

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=4.2e-21  Score=139.55  Aligned_cols=114  Identities=23%  Similarity=0.333  Sum_probs=98.5

Q ss_pred             hhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc------eeeecCC
Q 047548           35 SDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG------LVYEFMS  104 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv~e~~~  104 (156)
                      .++||+|.||+||+++... +..||+|.+.-...+.   .-..+||.+|+++.|+||+++.+++...      +|+|||+
T Consensus       122 i~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMd  201 (560)
T KOG0600|consen  122 IEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMD  201 (560)
T ss_pred             HHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEeccc
Confidence            4689999999999999655 8999999887543222   4578999999999999999999998876      9999998


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      . +|.-++...      ...+++.++..++.|++.||.|||+++++|+||-
T Consensus       202 h-DL~GLl~~p------~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK  245 (560)
T KOG0600|consen  202 H-DLSGLLSSP------GVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIK  245 (560)
T ss_pred             c-hhhhhhcCC------CcccChHHHHHHHHHHHHHHHHHhhcCeeecccc
Confidence            7 898888765      4459999999999999999999999999999984

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=4.7e-21  Score=141.72  Aligned_cols=118  Identities=21%  Similarity=0.301  Sum_probs=104.8

Q ss_pred             hhhhhhccccccCceEEEEEe-CCCcEEEEEeccc----CCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKL-HEGRVAAVKVLSE----SMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~a~k~~~~----~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ++....+||+|+|+.||.+.. ..|+.+|+|++..    .....+...+|+++.+.++|+||++++++|.+.    ++.|
T Consensus        19 ~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLE   98 (592)
T KOG0575|consen   19 RYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLE   98 (592)
T ss_pred             eeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEE
Confidence            445667999999999999997 4499999999986    333446799999999999999999999999998    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|+.++|..+++.       ...++++....+..||+.||.|||+++++|+|+.
T Consensus        99 LC~~~sL~el~Kr-------rk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLK  145 (592)
T KOG0575|consen   99 LCHRGSLMELLKR-------RKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLK  145 (592)
T ss_pred             ecCCccHHHHHHh-------cCCCCcHHHHHHHHHHHHHHHHHHhcCceecccc
Confidence            9999999999985       4559999999999999999999999999999973

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=7.6e-21  Score=135.37  Aligned_cols=115  Identities=19%  Similarity=0.254  Sum_probs=98.9

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC--------ChHHHHHHHHHHcCCCCCCccccceeeecc----ee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG--------NGEEFINEVACISGTSHVNIVTPLGICCEG----LV   99 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~--------~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv   99 (156)
                      -+.+.||+|+||.|-++..+. +..||+|++.....        ......+|+.+|+.++||+|+++.+++..+    +|
T Consensus       175 ii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmV  254 (475)
T KOG0615|consen  175 IISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMV  254 (475)
T ss_pred             EeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEE
Confidence            345789999999999998765 99999999975321        113467999999999999999999999987    99


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +||+.||+|.+++..       +..+.+..-..++.|++.|+.|||++++.|+||
T Consensus       255 lE~v~GGeLfd~vv~-------nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDi  302 (475)
T KOG0615|consen  255 LEYVEGGELFDKVVA-------NKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDI  302 (475)
T ss_pred             EEEecCccHHHHHHh-------ccccccchhHHHHHHHHHHHHHHHHcCcccccC
Confidence            999999999999976       344666667889999999999999999999998

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.85  E-value=1.7e-21  Score=148.52  Aligned_cols=134  Identities=26%  Similarity=0.480  Sum_probs=110.0

Q ss_pred             ChHHHHhhhhhhhhccccccCceEEEEEeCC------CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceee
Q 047548           23 NYSDVKKMTNSFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGIC   94 (156)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~   94 (156)
                      ...++++....+.+.||+|+||.||++...+      ...||||.++.....  .++|.+|++++..++|+||++++|+|
T Consensus       479 ~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC  558 (774)
T KOG1026|consen  479 KVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVC  558 (774)
T ss_pred             ceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE
Confidence            3445555555667899999999999998532      468999999875544  36899999999999999999999999


Q ss_pred             ecc----eeeecCCCCChHHHhhhcCCCCCC-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccC
Q 047548           95 CEG----LVYEFMSNGSLHKFIYDKGSMSTK-------NNRLEWTTLSEIVVGVARGLECLIAVATLGLCIST  156 (156)
Q Consensus        95 ~~~----lv~e~~~~g~L~~~l~~~~~~~~~-------~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~~  156 (156)
                      ..+    +++||+..|||.+||+-..+....       ..+++..+.+.++.|||.||.||-++..+|+|+-|
T Consensus       559 ~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLAT  631 (774)
T KOG1026|consen  559 REGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLAT  631 (774)
T ss_pred             ccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhh
Confidence            987    999999999999999865432221       12367889999999999999999999999999865

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.84  E-value=4.5e-20  Score=129.75  Aligned_cols=113  Identities=23%  Similarity=0.339  Sum_probs=100.0

Q ss_pred             hhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc-----eeeecCCCC
Q 047548           35 SDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG-----LVYEFMSNG  106 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----lv~e~~~~g  106 (156)
                      ...||+|..|+|+++.++. +..+|+|.+......  .+++.+|+.++...+||+|++++|.|...     ++||||.+|
T Consensus        84 ~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgG  163 (364)
T KOG0581|consen   84 LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGG  163 (364)
T ss_pred             hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCC
Confidence            3589999999999999876 889999999543322  36899999999999999999999999876     899999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA-VATLGLCI  154 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~-~~~~h~~i  154 (156)
                      +|.++++..       ...++..+..++.++++||.|||+ +.++|+||
T Consensus       164 SLd~~~k~~-------g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDI  205 (364)
T KOG0581|consen  164 SLDDILKRV-------GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDI  205 (364)
T ss_pred             CHHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccC
Confidence            999999863       338899999999999999999995 99999998

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.84  E-value=2.2e-20  Score=146.78  Aligned_cols=131  Identities=24%  Similarity=0.448  Sum_probs=111.7

Q ss_pred             HHHHhhhhhhhhccccccCceEEEEEeCC--Cc----EEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeec
Q 047548           25 SDVKKMTNSFSDKVRQGGYGVVYRGKLHE--GR----VAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCE   96 (156)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~--~~----~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~   96 (156)
                      .++.+...++.+.||+|+||.||.|...+  +.    .||+|.+.......  ..|.+|..+++...|+||++++|++..
T Consensus       687 p~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~  766 (1025)
T KOG1095|consen  687 PEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD  766 (1025)
T ss_pred             ccCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC
Confidence            34555666777899999999999999765  32    48889887653333  679999999999999999999999998


Q ss_pred             c----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           97 G----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        97 ~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .    +++|||++|+|..||+..+........++...++.++.|||+||.||++++.+|+|+.
T Consensus       767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLA  829 (1025)
T KOG1095|consen  767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLA  829 (1025)
T ss_pred             CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchh
Confidence            7    9999999999999999876555556678899999999999999999999999999985

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.83  E-value=1.8e-20  Score=138.73  Aligned_cols=128  Identities=24%  Similarity=0.406  Sum_probs=109.3

Q ss_pred             hHHHHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----
Q 047548           24 YSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----   97 (156)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----   97 (156)
                      ..++++...-|.++||+|.||.|-.|......+||+|.+++....  +.+|.+|+++|.+++||||+.+.|.|...    
T Consensus       532 l~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePic  611 (807)
T KOG1094|consen  532 LVEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLC  611 (807)
T ss_pred             hhhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchH
Confidence            346677777788999999999999999877789999999875433  37899999999999999999999999887    


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccC
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIST  156 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~~  156 (156)
                      +++||+++|+|.+|+..+..     ..........+|.||+.||+||-+.+.+|+|+.|
T Consensus       612 mI~EYmEnGDLnqFl~ahea-----pt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~  665 (807)
T KOG1094|consen  612 MITEYMENGDLNQFLSAHEL-----PTAETAPGVSICTQIASGMAYLESLNFVHRDLAT  665 (807)
T ss_pred             HHHHHHhcCcHHHHHHhccC-----cccccchhHHHHHHHHHHHHHHHhhchhhccccc
Confidence            99999999999999976532     1133455677999999999999999999999875

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.83  E-value=5.7e-20  Score=124.56  Aligned_cols=115  Identities=25%  Similarity=0.358  Sum_probs=101.2

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .-.+++|+|.||.||++.... ++.||+|.++......   ....+|+.+|+.++|+||+.+++++...    +|+||++
T Consensus         5 ~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~   84 (318)
T KOG0659|consen    5 EKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMP   84 (318)
T ss_pred             hhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEecc
Confidence            345689999999999999654 9999999998653332   5689999999999999999999999886    9999998


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      . +|+..++..      +..++...+..++.++++|++|||++.++|+|+
T Consensus        85 t-dLe~vIkd~------~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDl  127 (318)
T KOG0659|consen   85 T-DLEVVIKDK------NIILSPADIKSYMLMTLKGLAYCHSKWILHRDL  127 (318)
T ss_pred             c-cHHHHhccc------ccccCHHHHHHHHHHHHHHHHHHHhhhhhcccC
Confidence            7 999999876      566889999999999999999999999999997

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.82  E-value=4.7e-20  Score=127.20  Aligned_cols=113  Identities=19%  Similarity=0.295  Sum_probs=97.6

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGS  107 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~  107 (156)
                      .++|+|+||.|++|+.++ |+.||+|.+..+..+.   +-..+|+++|++++|+|++.++.+|...    +|+||++. +
T Consensus         8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dh-T   86 (396)
T KOG0593|consen    8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDH-T   86 (396)
T ss_pred             hccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecch-H
Confidence            478999999999999887 9999999998765444   4588999999999999999999999887    99999987 5


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ..+-+...      ...++...+..++.|++.|+.|+|+++++|+||-
T Consensus        87 vL~eLe~~------p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIK  128 (396)
T KOG0593|consen   87 VLHELERY------PNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIK  128 (396)
T ss_pred             HHHHHHhc------cCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCC
Confidence            55555543      3458889999999999999999999999999983

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.81  E-value=5e-20  Score=133.23  Aligned_cols=118  Identities=23%  Similarity=0.360  Sum_probs=104.0

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHH--HHHHHHHHcCCC-CCCccccceeeecc-----eee
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEE--FINEVACISGTS-HVNIVTPLGICCEG-----LVY  100 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~--~~~e~~~l~~l~-~~~i~~l~~~~~~~-----lv~  100 (156)
                      .++...++||.|+||.||++.... +..||+|.++......++  -.+|+..|+++. |+||+++..++.+.     +||
T Consensus        10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf   89 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF   89 (538)
T ss_pred             HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence            345667899999999999999765 889999999876555543  578999999997 99999999998886     899


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      |||+. +|+++++..      ++.+++..+..|+.||++||+|+|.++..|+|+
T Consensus        90 E~Md~-NLYqLmK~R------~r~fse~~irnim~QilqGL~hiHk~GfFHRDl  136 (538)
T KOG0661|consen   90 EFMDC-NLYQLMKDR------NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDL  136 (538)
T ss_pred             Hhhhh-hHHHHHhhc------CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccC
Confidence            99976 999999876      677999999999999999999999999999996

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.80  E-value=1.5e-19  Score=129.41  Aligned_cols=117  Identities=17%  Similarity=0.258  Sum_probs=102.8

Q ss_pred             hhhhhhccccccCceEEEEEe-CCCcEEEEEecccCCCCh----HHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKL-HEGRVAAVKVLSESMGNG----EEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~a~k~~~~~~~~~----~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ++.+.+.||+|.||+|-++.. ..++.||+|.++......    -.+.+|+++++.++||||+.++.+|.+.    +|||
T Consensus        54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivME  133 (668)
T KOG0611|consen   54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVME  133 (668)
T ss_pred             HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEE
Confidence            346678999999999999986 449999999998754332    3578999999999999999999999887    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      |..+|+|++++...+       .+++.....+++||..++.|+|.+.++|+|+
T Consensus       134 YaS~GeLYDYiSer~-------~LsErEaRhfFRQIvSAVhYCHknrVvHRDL  179 (668)
T KOG0611|consen  134 YASGGELYDYISERG-------SLSEREARHFFRQIVSAVHYCHKNRVVHRDL  179 (668)
T ss_pred             ecCCccHHHHHHHhc-------cccHHHHHHHHHHHHHHHHHHhhccceeccc
Confidence            999999999998753       3889999999999999999999999999986

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.80  E-value=1.4e-19  Score=136.11  Aligned_cols=115  Identities=26%  Similarity=0.410  Sum_probs=101.5

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCC--CChHHHHHHHHHHcCCCCCCccccceeeecc----------eeeec
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM--GNGEEFINEVACISGTSHVNIVTPLGICCEG----------LVYEF  102 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------lv~e~  102 (156)
                      +.||+|+||.||+++.+. |+.||+|..+...  .....+.+|+.+++.+.|+||++++++-.+.          ++|||
T Consensus        19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEy   98 (732)
T KOG4250|consen   19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEY   98 (732)
T ss_pred             hhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEee
Confidence            579999999999999655 9999999998733  3447899999999999999999998765442          89999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      |++|+|...+..+.+    ...+++..++.+..+++.||.|||.++++|+||
T Consensus        99 C~gGsL~~~L~~PEN----~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDl  146 (732)
T KOG4250|consen   99 CSGGSLRKVLNSPEN----AYGLPESEFLDLLSDLVSALRHLRENGIVHRDL  146 (732)
T ss_pred             cCCCcHHHHhcCccc----ccCCCHHHHHHHHHHHHHHHHHHHHcCceeccC
Confidence            999999999987653    677999999999999999999999999999998

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.79  E-value=1.4e-18  Score=122.70  Aligned_cols=116  Identities=25%  Similarity=0.328  Sum_probs=99.1

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCcccccee--eec--c--eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGI--CCE--G--LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~--~~~--~--lv~e~~~  104 (156)
                      ...+.||+|+||.||.+.... +...|+|........ .+.+.+|+.+|..++|+||+++.|.  ...  .  ++|||++
T Consensus        20 ~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~   99 (313)
T KOG0198|consen   20 SKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAP   99 (313)
T ss_pred             hhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccC
Confidence            345789999999999999766 889999988754222 3568999999999999999999985  222  1  8999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +|+|.+++.+.+     . .+++..+..+..|+++||.|||+++++|.||
T Consensus       100 ~GsL~~~~~~~g-----~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~Di  143 (313)
T KOG0198|consen  100 GGSLSDLIKRYG-----G-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDI  143 (313)
T ss_pred             CCcHHHHHHHcC-----C-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCc
Confidence            999999998754     2 5899999999999999999999999999997

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.78  E-value=2.4e-18  Score=120.23  Aligned_cols=119  Identities=24%  Similarity=0.407  Sum_probs=100.0

Q ss_pred             hhhhhhccccccCceEEEEEeC----CCcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----eee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLH----EGRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LVY  100 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~----~~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~  100 (156)
                      ...+.+.||+|+||.||++.+.    .+..+++|.++......  ..+.+|+..+..++|+|++++.+.+...    ++|
T Consensus         6 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   85 (266)
T cd05064           6 SIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVT   85 (266)
T ss_pred             HeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEE
Confidence            3456678999999999999753    25688999987643222  4688999999999999999999988776    999


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++|+|.+++...      ...+++..+..++.|++.||+|||+++++|+||.
T Consensus        86 e~~~~~~L~~~l~~~------~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dik  134 (266)
T cd05064          86 EYMSNGALDSFLRKH------EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLA  134 (266)
T ss_pred             EeCCCCcHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccc
Confidence            999999999998754      2347889999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.78  E-value=3.6e-18  Score=118.57  Aligned_cols=117  Identities=27%  Similarity=0.465  Sum_probs=101.2

Q ss_pred             hhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCCh
Q 047548           33 SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSL  108 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L  108 (156)
                      .+.+.||+|+||.||++.++.+..+++|.+.........+..|+.++..++|+|++++++.+...    +++||+++|+|
T Consensus         7 ~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L   86 (256)
T cd05114           7 TFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCL   86 (256)
T ss_pred             EEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcH
Confidence            34568999999999999987777899998875544556788999999999999999999988776    99999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+++...      ...+++..+..++.|++.||.|||++++.|+|+.
T Consensus        87 ~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~  127 (256)
T cd05114          87 LNYLRQR------QGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLA  127 (256)
T ss_pred             HHHHHhC------ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccC
Confidence            9998753      2237788999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.78  E-value=3.5e-18  Score=118.90  Aligned_cols=124  Identities=21%  Similarity=0.335  Sum_probs=106.0

Q ss_pred             HHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc---eeeecC
Q 047548           27 VKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG---LVYEFM  103 (156)
Q Consensus        27 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~~  103 (156)
                      +......+.+.||+|+||.||++...++..+++|.+.........+.+|+.++..++|+|++++.+.+...   +++||+
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~   82 (260)
T cd05067           3 VPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYM   82 (260)
T ss_pred             cchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcC
Confidence            44455667789999999999999987788999999886655557889999999999999999999887554   999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++....     ...+++.....++.|++.||.|||+.++.|+||.
T Consensus        83 ~~~~L~~~~~~~~-----~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~  129 (260)
T cd05067          83 ENGSLVDFLKTPE-----GIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLR  129 (260)
T ss_pred             CCCCHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCeeccccc
Confidence            9999999986532     3357888899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.78  E-value=3.1e-19  Score=119.36  Aligned_cols=117  Identities=21%  Similarity=0.233  Sum_probs=101.8

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      ++++.||+|.||.||.++.+. +--||+|++..+..    -...+.+|+++-+.++||||.++++++.+.    +++||.
T Consensus        25 eigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya  104 (281)
T KOG0580|consen   25 EIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYA  104 (281)
T ss_pred             cccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEec
Confidence            456789999999999999766 67889999976432    225788999999999999999999999987    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +.|++++.|....     ...+++.....+..|+|.|+.|+|..+++|+||
T Consensus       105 ~~gel~k~L~~~~-----~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdi  150 (281)
T KOG0580|consen  105 PRGELYKDLQEGR-----MKRFDEQRAATYIKQLANALLYCHLKRVIHRDI  150 (281)
T ss_pred             CCchHHHHHHhcc-----cccccccchhHHHHHHHHHHHHhccCCcccCCC
Confidence            9999999998533     455788889999999999999999999999998

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.78  E-value=1.4e-18  Score=122.23  Aligned_cols=115  Identities=17%  Similarity=0.230  Sum_probs=101.6

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.++||+|+||+|+.++.++ ++-+|+|+++...    ++......|..++..++||.|+++...|.+.    +|+||+
T Consensus        28 ~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~  107 (357)
T KOG0598|consen   28 EILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYL  107 (357)
T ss_pred             eeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEecc
Confidence            345799999999999999877 8999999998632    2335688899999999999999999999887    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      .||+|...|.+.       ..+++.....+++.|+.||.|||+.+++|+|+
T Consensus       108 ~GGeLf~hL~~e-------g~F~E~~arfYlaEi~lAL~~LH~~gIiyRDl  151 (357)
T KOG0598|consen  108 NGGELFYHLQRE-------GRFSEDRARFYLAEIVLALGYLHSKGIIYRDL  151 (357)
T ss_pred             CCccHHHHHHhc-------CCcchhHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence            999999999864       44889999999999999999999999999997

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.78  E-value=1.7e-18  Score=120.70  Aligned_cols=117  Identities=30%  Similarity=0.497  Sum_probs=96.8

Q ss_pred             hhhccccccCceEEEEEeC--C---CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           34 FSDKVRQGGYGVVYRGKLH--E---GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~--~---~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      +.+.||.|.||.||+|.+.  .   +..|++|.+......  .+.+.+|+..+..++|+|++++.+.+...    +++||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            3468999999999999987  1   568899999654332  36799999999999999999999999954    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+|.+++....     ...+++..+..++.|++.||.|||+++++|.+++
T Consensus        83 ~~~g~L~~~L~~~~-----~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~  130 (259)
T PF07714_consen   83 CPGGSLDDYLKSKN-----KEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLS  130 (259)
T ss_dssp             -TTEBHHHHHHHTC-----TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred             cccccccccccccc-----cccccccccccccccccccccccccccccccccc
Confidence            99999999998752     3458889999999999999999999999999875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.78  E-value=2.6e-18  Score=124.93  Aligned_cols=117  Identities=19%  Similarity=0.280  Sum_probs=100.6

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccC----CC--ChHHHHHHHHHHcCCC-CCCccccceeeecc----e
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MG--NGEEFINEVACISGTS-HVNIVTPLGICCEG----L   98 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~--~~~~~~~e~~~l~~l~-~~~i~~l~~~~~~~----l   98 (156)
                      .+.+.+.||+|+||+|+.+.... +..||+|++...    ..  ..+.+.+|+.+++.+. ||||+++..++...    +
T Consensus        18 ~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~i   97 (370)
T KOG0583|consen   18 KYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYI   97 (370)
T ss_pred             ceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEE
Confidence            34566889999999999998654 899999977653    22  2245778999999998 99999999999887    9


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +|||+.+|+|.+++...       ..+.+.....++.|++.|++|||+++++|+|+
T Consensus        98 vmEy~~gGdL~~~i~~~-------g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDL  146 (370)
T KOG0583|consen   98 VMEYCSGGDLFDYIVNK-------GRLKEDEARKYFRQLISAVAYCHSRGIVHRDL  146 (370)
T ss_pred             EEEecCCccHHHHHHHc-------CCCChHHHHHHHHHHHHHHHHHHhCCEeeCCC
Confidence            99999999999999873       33778999999999999999999999999997

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.77  E-value=9.6e-18  Score=116.70  Aligned_cols=124  Identities=23%  Similarity=0.376  Sum_probs=104.9

Q ss_pred             HHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc---eeeecC
Q 047548           27 VKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG---LVYEFM  103 (156)
Q Consensus        27 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~~  103 (156)
                      +......+.+.+|+|+||.||++....+..+++|.+.........+.+|+.+++.++|++++++.+.+...   +++||+
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~   82 (260)
T cd05070           3 IPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYM   82 (260)
T ss_pred             CchHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEec
Confidence            33445566789999999999999877777899999876554556789999999999999999999887655   999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++....     ...+++..+..++.|++.||.|||++++.|+|+.
T Consensus        83 ~~~~L~~~~~~~~-----~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~  129 (260)
T cd05070          83 SKGSLLDFLKDGE-----GRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLR  129 (260)
T ss_pred             CCCcHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCc
Confidence            9999999987532     3347889999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.77  E-value=3.3e-19  Score=122.04  Aligned_cols=124  Identities=20%  Similarity=0.276  Sum_probs=101.5

Q ss_pred             hhhhhhhhccccccCceEEEEEe-CCCcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCcccccee-eecc-----e
Q 047548           29 KMTNSFSDKVRQGGYGVVYRGKL-HEGRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGI-CCEG-----L   98 (156)
Q Consensus        29 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~-~~~~-----l   98 (156)
                      .+...+.++||.|+||.||++.. .++..+|.|-++-...+   .+.+..|+.+|++++||||+++.+. +...     +
T Consensus        18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni   97 (375)
T KOG0591|consen   18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI   97 (375)
T ss_pred             HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence            34456678999999999999985 45889999888743333   3679999999999999999999883 3333     9


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh--cC--CCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA--VA--TLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~--~~--~~h~~i~  155 (156)
                      +||++..|+|.+.++.....   .+.++++.+++++.|++.||..+|+  .+  ++|+||-
T Consensus        98 vmE~c~~GDLsqmIk~~K~q---kr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIK  155 (375)
T KOG0591|consen   98 VMELCDAGDLSQMIKHFKKQ---KRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIK  155 (375)
T ss_pred             HHHhhcccCHHHHHHHHHhc---cccCchHHHHHHHHHHHHHHHHHhccccccceeeccCc
Confidence            99999999999999753321   5668999999999999999999999  45  8999983

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.77  E-value=2.4e-18  Score=124.08  Aligned_cols=129  Identities=22%  Similarity=0.341  Sum_probs=100.6

Q ss_pred             HHhhhhhhhhccccccCceEEEEEeC------CCcEEEEEecccCCCC--hHHHHHHHHHHcCC-CCCCccccceeeecc
Q 047548           27 VKKMTNSFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMGN--GEEFINEVACISGT-SHVNIVTPLGICCEG   97 (156)
Q Consensus        27 ~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~   97 (156)
                      ++.....+.+.||+|+||.||++...      .+..||+|.+......  ...+.+|+.++..+ +|+|++++++.+...
T Consensus         4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   83 (338)
T cd05102           4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP   83 (338)
T ss_pred             cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence            44445567789999999999999742      1567999998754322  25688999999999 899999999987653


Q ss_pred             -----eeeecCCCCChHHHhhhcCCCC-----------------------------------------------------
Q 047548           98 -----LVYEFMSNGSLHKFIYDKGSMS-----------------------------------------------------  119 (156)
Q Consensus        98 -----lv~e~~~~g~L~~~l~~~~~~~-----------------------------------------------------  119 (156)
                           +++||+++|+|.+++.......                                                     
T Consensus        84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (338)
T cd05102          84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET  163 (338)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence                 7899999999999987532100                                                     


Q ss_pred             --CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          120 --TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       120 --~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                        .+...+++..+..++.|++.||.|||+++++|+||.
T Consensus       164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiK  201 (338)
T cd05102         164 DDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLA  201 (338)
T ss_pred             cccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCc
Confidence              001346677888999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.77  E-value=1.7e-18  Score=128.11  Aligned_cols=115  Identities=22%  Similarity=0.293  Sum_probs=102.4

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      +++-+.+|+|+||.||+|+.+. ...||+|.+.......   +.+.+|+++++.++|+||+..++++.+.    +|.||+
T Consensus         4 yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a   83 (808)
T KOG0597|consen    4 YHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYA   83 (808)
T ss_pred             hhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhh
Confidence            4556789999999999999776 8899999998755444   5689999999999999999999999887    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      .| +|..++..       +..+++..+..++.+++.||.|||++.+.|+|+
T Consensus        84 ~g-~L~~il~~-------d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~  126 (808)
T KOG0597|consen   84 VG-DLFTILEQ-------DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDM  126 (808)
T ss_pred             hh-hHHHHHHh-------ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccC
Confidence            87 99999986       445899999999999999999999999999997

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.77  E-value=2.2e-18  Score=128.86  Aligned_cols=123  Identities=21%  Similarity=0.397  Sum_probs=103.5

Q ss_pred             HHhhhhhhhhccccccCceEEEEEeCC-----CcEEEEEecccC-C-CChHHHHHHHHHHcCCCCCCccccceeeecc--
Q 047548           27 VKKMTNSFSDKVRQGGYGVVYRGKLHE-----GRVAAVKVLSES-M-GNGEEFINEVACISGTSHVNIVTPLGICCEG--   97 (156)
Q Consensus        27 ~~~~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~a~k~~~~~-~-~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~--   97 (156)
                      +.++.-.+.+.||+|.||.||+|.+..     .-.||+|.-+.. . .+.+.|..|..+++..+||||++++|+|...  
T Consensus       386 l~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~  465 (974)
T KOG4257|consen  386 LRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPM  465 (974)
T ss_pred             eehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccce
Confidence            344444566789999999999998632     346788887752 2 2337799999999999999999999999988  


Q ss_pred             -eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 -LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 -lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       ++||+++.|.|..++...      ...++...+..+|.|++.+|+|||+.+.+|+||-
T Consensus       466 WivmEL~~~GELr~yLq~n------k~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIA  518 (974)
T KOG4257|consen  466 WIVMELAPLGELREYLQQN------KDSLPLRTLTLYCYQICTALAYLESKRFVHRDIA  518 (974)
T ss_pred             eEEEecccchhHHHHHHhc------cccchHHHHHHHHHHHHHHHHHHHhhchhhhhhh
Confidence             999999999999999875      3457888999999999999999999999999984

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.77  E-value=5.6e-18  Score=121.59  Aligned_cols=112  Identities=14%  Similarity=0.142  Sum_probs=96.2

Q ss_pred             ccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCC
Q 047548           37 KVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGS  107 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~  107 (156)
                      .||+|+||.||++.... +..+|+|++....    .....+.+|+.++..++|+|++++.+.+...    +++||+++++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~   81 (323)
T cd05571           2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE   81 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence            68999999999998755 8899999987532    1224577899999999999999999888776    9999999999


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        82 L~~~l~~~-------~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlk  122 (323)
T cd05571          82 LFFHLSRE-------RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLK  122 (323)
T ss_pred             HHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCC
Confidence            99998753       347888999999999999999999999999985

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.77  E-value=5e-18  Score=124.22  Aligned_cols=131  Identities=24%  Similarity=0.368  Sum_probs=103.1

Q ss_pred             HHHHhhhhhhhhccccccCceEEEEEeC------CCcEEEEEecccCCC--ChHHHHHHHHHHcCC-CCCCccccceeee
Q 047548           25 SDVKKMTNSFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMG--NGEEFINEVACISGT-SHVNIVTPLGICC   95 (156)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~l~~~~~   95 (156)
                      ++++.....+.+.||+|+||.||++...      .+..+|+|.+.....  ..+.+.+|+.++..+ +|+|++++.+.+.
T Consensus        30 ~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~  109 (375)
T cd05104          30 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACT  109 (375)
T ss_pred             cccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeec
Confidence            3455556677899999999999999631      256899999875432  225688999999999 8999999999987


Q ss_pred             cc----eeeecCCCCChHHHhhhcCCC-----------------------------------------------------
Q 047548           96 EG----LVYEFMSNGSLHKFIYDKGSM-----------------------------------------------------  118 (156)
Q Consensus        96 ~~----lv~e~~~~g~L~~~l~~~~~~-----------------------------------------------------  118 (156)
                      ..    ++|||+++|+|.+++......                                                     
T Consensus       110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  189 (375)
T cd05104         110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV  189 (375)
T ss_pred             cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence            76    999999999999999653210                                                     


Q ss_pred             ---------------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          119 ---------------STKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       119 ---------------~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                                     ......+++..+..++.|++.||.|||+++++|+||.
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk  241 (375)
T cd05104         190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLA  241 (375)
T ss_pred             ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCc
Confidence                           0001236677889999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.77  E-value=1e-17  Score=116.85  Aligned_cols=122  Identities=22%  Similarity=0.348  Sum_probs=102.7

Q ss_pred             hhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc---eeeecCCC
Q 047548           29 KMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG---LVYEFMSN  105 (156)
Q Consensus        29 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~~~~  105 (156)
                      .....+.+.||+|+||.||++...+...+++|.+.........+.+|+.++..++|+|++++.+.+...   +++||+++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~   84 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSK   84 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCCC
Confidence            344567789999999999999876666799999876444456788999999999999999998877555   99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++....     ...+++..+..++.|++.||.|||++++.|+|+.
T Consensus        85 ~~L~~~~~~~~-----~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~  129 (262)
T cd05071          85 GSLLDFLKGEM-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR  129 (262)
T ss_pred             CcHHHHHhhcc-----ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccC
Confidence            99999997532     2346788999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=4.1e-18  Score=124.02  Aligned_cols=115  Identities=13%  Similarity=0.175  Sum_probs=98.9

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      +.+.||+|+||.||++.... +..+|+|++....    .....+.+|+.++..++|+|++++++.+...    +++||++
T Consensus         5 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~   84 (364)
T cd05599           5 SIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLP   84 (364)
T ss_pred             EEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCC
Confidence            45689999999999999765 8899999987532    1224577899999999999999999988877    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        85 ~g~L~~~l~~~-------~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlk  128 (364)
T cd05599          85 GGDMMTLLMKK-------DTFTEEETRFYIAETILAIDSIHKLGYIHRDIK  128 (364)
T ss_pred             CcHHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCC
Confidence            99999998753       347889999999999999999999999999985

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.77  E-value=8.5e-18  Score=120.25  Aligned_cols=117  Identities=21%  Similarity=0.398  Sum_probs=97.5

Q ss_pred             hhhhccccccCceEEEEEeCC-Cc----EEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc---eeeec
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GR----VAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG---LVYEF  102 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~----~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~  102 (156)
                      ...+.||+|+||.||++.+.. +.    .+++|.+.....  ..+.+..|+.++..++|+|++++++.+...   ++++|
T Consensus        10 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v~e~   89 (316)
T cd05108          10 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQL   89 (316)
T ss_pred             eeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceeeeec
Confidence            345689999999999998643 33    489999875322  225788999999999999999999988776   89999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+|.+++...      ...++...+..++.|++.||.|||+++++|+|+.
T Consensus        90 ~~~g~l~~~l~~~------~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlk  136 (316)
T cd05108          90 MPFGCLLDYVREH------KDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLA  136 (316)
T ss_pred             CCCCCHHHHHHhc------cccCCHHHHHHHHHHHHHHHHHHHhcCeeccccc
Confidence            9999999999764      2347788889999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=4.9e-18  Score=124.24  Aligned_cols=115  Identities=15%  Similarity=0.175  Sum_probs=97.9

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      +.+.||+|+||.||++.... ++.+|+|.+.....    ..+.+.+|+.++..+.|+|++++++.+...    +++||++
T Consensus         5 ~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~   84 (377)
T cd05629           5 TVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLP   84 (377)
T ss_pred             EeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCC
Confidence            45789999999999998765 88999998864321    124578899999999999999999988876    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|+|.+++...       ..+++..+..++.|++.||.|||+.+++|+||.
T Consensus        85 gg~L~~~l~~~-------~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlk  128 (377)
T cd05629          85 GGDLMTMLIKY-------DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIK  128 (377)
T ss_pred             CCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence            99999998753       347788888999999999999999999999984

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=1.1e-18  Score=126.86  Aligned_cols=144  Identities=18%  Similarity=0.188  Sum_probs=123.2

Q ss_pred             hhHHHHHHhhCCCCCCCCChHHHHh-hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCC
Q 047548            5 QDVDAVIRKYGSLAPKGYNYSDVKK-MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGT   82 (156)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l   82 (156)
                      .+.++-.+.|..+.++...++++.. .++++.++||+|.|++||.+.... .+.||+|+.+....+.+....||.+|+++
T Consensus        52 ~~eqE~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v  131 (590)
T KOG1290|consen   52 DEEQEDPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQV  131 (590)
T ss_pred             cccccChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHH
Confidence            4567778999999999999999977 889999999999999999998654 78999999988777778899999999987


Q ss_pred             C-----C---CCccccceeeecc--------eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 047548           83 S-----H---VNIVTPLGICCEG--------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA  146 (156)
Q Consensus        83 ~-----~---~~i~~l~~~~~~~--------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~  146 (156)
                      .     +   ..+++|++.|...        +|+|++ |.+|..+|....     .+.++...+.+|+.|++.||+|||.
T Consensus       132 ~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~-----YrGlpl~~VK~I~~qvL~GLdYLH~  205 (590)
T KOG1290|consen  132 REGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSN-----YRGLPLSCVKEICRQVLTGLDYLHR  205 (590)
T ss_pred             HhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhC-----CCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            3     2   3588888877654        999988 779999998753     6779999999999999999999999


Q ss_pred             c-CCCCccc
Q 047548          147 V-ATLGLCI  154 (156)
Q Consensus       147 ~-~~~h~~i  154 (156)
                      . +++|-||
T Consensus       206 ecgIIHTDl  214 (590)
T KOG1290|consen  206 ECGIIHTDL  214 (590)
T ss_pred             hcCccccCC
Confidence            8 6777665

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.76  E-value=9.3e-18  Score=116.77  Aligned_cols=121  Identities=18%  Similarity=0.316  Sum_probs=102.4

Q ss_pred             hhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      ....+.+.+|+|++|.||++...++..+++|.+.......+.+.+|+.++..++|+|++++.+.+...    +++||+++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   85 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAK   85 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCC
Confidence            33455678999999999999877777899998876444456789999999999999999999887766    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++....     ....++..+..++.|++.||.|||+.++.|.||.
T Consensus        86 ~~L~~~l~~~~-----~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~  130 (261)
T cd05072          86 GSLLDFLKSDE-----GGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLR  130 (261)
T ss_pred             CcHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence            99999987532     2346788889999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=4.2e-18  Score=120.56  Aligned_cols=116  Identities=17%  Similarity=0.155  Sum_probs=98.6

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.+.||+|+||.||++.... +..+|+|.+.....    ..+.+.+|+.++..+.|+|++++.+.+.+.    +++||+
T Consensus         4 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   83 (291)
T cd05612           4 ERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYV   83 (291)
T ss_pred             eeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCC
Confidence            345789999999999999764 88999999864321    224578899999999999999999887766    899999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++...       ..+++.....++.|++.||.|||+++++|+||.
T Consensus        84 ~~~~L~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  128 (291)
T cd05612          84 PGGELFSYLRNS-------GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLK  128 (291)
T ss_pred             CCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence            999999999763       347788889999999999999999999999985

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=1.3e-18  Score=131.47  Aligned_cols=115  Identities=24%  Similarity=0.259  Sum_probs=98.6

Q ss_pred             ccccccCceEEEEEeCC-CcEEEEEecccCC-CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCChHH
Q 047548           37 KVRQGGYGVVYRGKLHE-GRVAAVKVLSESM-GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHK  110 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L~~  110 (156)
                      +||+|.||+||.++... ....|+|.+.... .+.+.+..|+.+-+.++|.||+++.|.+...    ++||-+|||+|.+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            79999999999999766 6778999987543 3347789999999999999999999998876    8999999999999


Q ss_pred             HhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          111 FIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       111 ~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++...++    -.-.+..+..+..||++||.|||++.++|+||-
T Consensus       662 LLrskWGP----lKDNEstm~fYtkQILeGLkYLHen~IVHRDIK  702 (1226)
T KOG4279|consen  662 LLRSKWGP----LKDNESTMNFYTKQILEGLKYLHENKIVHRDIK  702 (1226)
T ss_pred             HHHhccCC----CccchhHHHHHHHHHHHHhhhhhhcceeecccc
Confidence            99887432    112578889999999999999999999999983

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.76  E-value=5.1e-18  Score=124.02  Aligned_cols=118  Identities=15%  Similarity=0.163  Sum_probs=98.7

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eee
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVY  100 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~  100 (156)
                      ....+.+.||+|+||.||++.... +..+|+|++....    ...+.+.+|+.++..++|+|++++.+.+...    +++
T Consensus        43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~  122 (371)
T cd05622          43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM  122 (371)
T ss_pred             hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            344556789999999999999865 7899999986421    1224577889999999999999999888776    999


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++|+|.+++...        .++...+..++.|++.||.|||+++++|+||.
T Consensus       123 Ey~~gg~L~~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLk  169 (371)
T cd05622         123 EYMPGGDLVNLMSNY--------DVPEKWARFYTAEVVLALDAIHSMGFIHRDVK  169 (371)
T ss_pred             cCCCCCcHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCC
Confidence            999999999998642        36788888999999999999999999999984

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.76  E-value=5.6e-18  Score=124.17  Aligned_cols=115  Identities=10%  Similarity=0.087  Sum_probs=98.3

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      +.+.||+|+||.||++.... +..+|+|++.....    ....+.+|+.++..++|++++++++.+...    +++||++
T Consensus         5 ~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~   84 (381)
T cd05626           5 KIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP   84 (381)
T ss_pred             EEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCC
Confidence            44689999999999998765 88999999875321    124678899999999999999999998876    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|+|.+++...       ..+++.....++.|++.||.|||+.+++|+||.
T Consensus        85 gg~L~~~l~~~-------~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlK  128 (381)
T cd05626          85 GGDMMSLLIRM-------EVFPEVLARFYIAELTLAIESVHKMGFIHRDIK  128 (381)
T ss_pred             CCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCc
Confidence            99999998763       337788888999999999999999999999984

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.76  E-value=9.8e-18  Score=120.38  Aligned_cols=112  Identities=17%  Similarity=0.160  Sum_probs=95.8

Q ss_pred             ccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCC
Q 047548           37 KVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGS  107 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~  107 (156)
                      .||+|+||.||++.... +..+|+|.+....    .....+.+|+.++..++|+|++++.+.+...    +++||+++|+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~   81 (323)
T cd05595           2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE   81 (323)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence            68999999999998765 8899999987532    1224567899999999999999999888776    9999999999


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |..++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        82 L~~~l~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlk  122 (323)
T cd05595          82 LFFHLSRE-------RVFTEERARFYGAEIVSALEYLHSRDVVYRDIK  122 (323)
T ss_pred             HHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCC
Confidence            99888653       347889999999999999999999999999984

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.76  E-value=1.1e-17  Score=116.55  Aligned_cols=122  Identities=21%  Similarity=0.362  Sum_probs=104.1

Q ss_pred             hhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           29 KMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        29 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .....+.+.||+|++|.||++....+..+++|.+.......+.+.+|+.++..++|+|++++.+.+...    +++|+++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   84 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMK   84 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeeccc
Confidence            344556689999999999999876677899999876554556788999999999999999999887766    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++....     ...+++..+..++.|++.|+.|||+.+++|+||.
T Consensus        85 ~~~L~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~  130 (261)
T cd05068          85 YGSLLEYLQGGA-----GRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLA  130 (261)
T ss_pred             CCcHHHHHhccC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence            999999997532     2357889999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.76  E-value=2e-17  Score=114.95  Aligned_cols=118  Identities=25%  Similarity=0.436  Sum_probs=101.2

Q ss_pred             hhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGS  107 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~  107 (156)
                      ..+.+.+|+|+||.||++..+.+..+++|.+.........+.+|+.++..++|+|++++.+.+...    +++||+++++
T Consensus         6 ~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   85 (256)
T cd05059           6 LTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGC   85 (256)
T ss_pred             cchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCC
Confidence            346678999999999999887677889998876544456788899999999999999999887765    9999999999


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |.+++...      ...+++.....++.|++.|+.|||++++.|+|+.
T Consensus        86 L~~~l~~~------~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~  127 (256)
T cd05059          86 LLNYLRER------KGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLA  127 (256)
T ss_pred             HHHHHHhc------ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccc
Confidence            99998754      2347889999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.76  E-value=1.6e-17  Score=115.58  Aligned_cols=122  Identities=22%  Similarity=0.354  Sum_probs=102.4

Q ss_pred             hhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc---eeeecCCC
Q 047548           29 KMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG---LVYEFMSN  105 (156)
Q Consensus        29 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~~~~  105 (156)
                      .....+...||+|++|.||++....+..+++|.+.......+.+.+|+.++..+.|++++++.+.+...   +++||+++
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~   84 (260)
T cd05069           5 RESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGK   84 (260)
T ss_pred             hHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCC
Confidence            344556678999999999999877766789998876544456788999999999999999998877655   99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++....     ...+++..+..++.|++.||.|||+.++.|.|+.
T Consensus        85 ~~L~~~~~~~~-----~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~  129 (260)
T cd05069          85 GSLLDFLKEGD-----GKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLR  129 (260)
T ss_pred             CCHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccC
Confidence            99999997532     3347788899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.76  E-value=1.6e-17  Score=118.19  Aligned_cols=125  Identities=22%  Similarity=0.424  Sum_probs=98.7

Q ss_pred             hhhhhhccccccCceEEEEEeCC-----------------CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccc
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-----------------GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPL   91 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-----------------~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~   91 (156)
                      ...+.+.||+|+||.||++....                 +..+|+|.+......  ...+.+|+.++..++|+|+++++
T Consensus         6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~   85 (304)
T cd05096           6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLL   85 (304)
T ss_pred             hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEE
Confidence            44566789999999999997532                 346899988754322  24688999999999999999999


Q ss_pred             eeeecc----eeeecCCCCChHHHhhhcCCC------------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           92 GICCEG----LVYEFMSNGSLHKFIYDKGSM------------STKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        92 ~~~~~~----lv~e~~~~g~L~~~l~~~~~~------------~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +.+...    +++||+++++|.+++......            ......+++..+..++.|++.||.|||+.+++|+||.
T Consensus        86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlk  165 (304)
T cd05096          86 GVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLA  165 (304)
T ss_pred             EEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcc
Confidence            988765    999999999999998643210            0011346678889999999999999999999999985

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.76  E-value=9.8e-18  Score=122.61  Aligned_cols=116  Identities=11%  Similarity=0.129  Sum_probs=98.5

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.+.||+|+||.||++.... +..+|+|++....    ...+.+.+|+.++..+.|++++++.+.+...    ++|||+
T Consensus         4 ~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~   83 (376)
T cd05598           4 VKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI   83 (376)
T ss_pred             eEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCC
Confidence            345689999999999998765 8899999986421    1235678899999999999999999888776    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        84 ~~g~L~~~i~~~-------~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlk  128 (376)
T cd05598          84 PGGDMMSLLIRL-------GIFEEDLARFYIAELTCAIESVHKMGFIHRDIK  128 (376)
T ss_pred             CCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCC
Confidence            999999999753       346788888899999999999999999999984

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.76  E-value=6.7e-18  Score=121.51  Aligned_cols=117  Identities=17%  Similarity=0.189  Sum_probs=99.7

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ..+.+.||+|+||.||++.... +..+|+|++....    ...+.+.+|+.++..++|+|++++.+.+...    +++||
T Consensus        20 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   99 (329)
T PTZ00263         20 FEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEF   99 (329)
T ss_pred             eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcC
Confidence            3456789999999999999865 8899999986532    1225688999999999999999999988776    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++...       ..++......++.|++.||.|||+++++|+||.
T Consensus       100 ~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlk  145 (329)
T PTZ00263        100 VVGGELFTHLRKA-------GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLK  145 (329)
T ss_pred             CCCChHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence            9999999998763       336788888899999999999999999999985

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.76  E-value=1.4e-18  Score=130.09  Aligned_cols=127  Identities=24%  Similarity=0.406  Sum_probs=108.9

Q ss_pred             ChHHHHhhhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----
Q 047548           23 NYSDVKKMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----   97 (156)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----   97 (156)
                      ..|++.+..-....+||-|.||.||.|.|+. ..+||||.++....+-..|+.|+.+++.++|+|++++.|+|...    
T Consensus       260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFY  339 (1157)
T KOG4278|consen  260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFY  339 (1157)
T ss_pred             chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeE
Confidence            4455544333445689999999999999987 88999999987766668999999999999999999999999887    


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      ++.|||++|+|.++|+...     ...++.-.++.++.||+.||.||..++.+|+|+
T Consensus       340 IiTEfM~yGNLLdYLRecn-----r~ev~avvLlyMAtQIsSaMeYLEkknFIHRDL  391 (1157)
T KOG4278|consen  340 IITEFMCYGNLLDYLRECN-----RSEVPAVVLLYMATQISSAMEYLEKKNFIHRDL  391 (1157)
T ss_pred             EEEecccCccHHHHHHHhc-----hhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence            9999999999999998742     334666788899999999999999999999986

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.76  E-value=1.5e-17  Score=119.54  Aligned_cols=117  Identities=16%  Similarity=0.191  Sum_probs=98.1

Q ss_pred             hhhccccc--cCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           34 FSDKVRQG--GYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        34 ~~~~lg~g--~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      +.++||+|  +|++||++..+. +..||+|.+.......   ..+.+|+.+++.++|+|++++.+.+...    +++||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            45689999  678999998765 8899999987543222   4577899999999999999999988776    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++....     ...+++..+..++.|++.||+|||+++++|+|+.
T Consensus        82 ~~~~l~~~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlk  128 (327)
T cd08227          82 AYGSAKDLICTHF-----MDGMSELAIAYILQGVLKALDYIHHMGYVHRSVK  128 (327)
T ss_pred             CCCcHHHHHHhhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCC
Confidence            9999999986532     2347888999999999999999999999999984

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.76  E-value=1.3e-18  Score=132.37  Aligned_cols=123  Identities=21%  Similarity=0.414  Sum_probs=106.1

Q ss_pred             HHHhhhhhhhhccccccCceEEEEEeCC----CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc--
Q 047548           26 DVKKMTNSFSDKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG--   97 (156)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~--   97 (156)
                      +|..+...+.++||.|.||.|+.|.++.    ...||+|.++....+  +.+|+.|+.++.+.+||||++|.|.+...  
T Consensus       625 EId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~P  704 (996)
T KOG0196|consen  625 EIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKP  704 (996)
T ss_pred             hcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCce
Confidence            3344444567899999999999999753    468999999975433  36799999999999999999999999887  


Q ss_pred             --eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548           98 --LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus        98 --lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                        ++.|||++|+|..||+..      ...++.-++..+.+.|+.||.||-+.+.+|+|+
T Consensus       705 vMIiTEyMENGsLDsFLR~~------DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDL  757 (996)
T KOG0196|consen  705 VMIITEYMENGSLDSFLRQN------DGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDL  757 (996)
T ss_pred             eEEEhhhhhCCcHHHHHhhc------CCceEeehHHHHHHHHHHHhHHHhhcCchhhhh
Confidence              899999999999999876      344888999999999999999999999999996

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.76  E-value=2e-17  Score=115.02  Aligned_cols=117  Identities=27%  Similarity=0.466  Sum_probs=100.9

Q ss_pred             hhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCCh
Q 047548           33 SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSL  108 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L  108 (156)
                      .+.+.+|+|+||.||.+...++..+|+|.+.........+.+|+.++..++|+|++++++.+...    +++||+++++|
T Consensus         7 ~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l   86 (256)
T cd05113           7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCL   86 (256)
T ss_pred             EEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcH
Confidence            45568999999999999887666799998876544456789999999999999999999988765    99999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+++...      ...+++..+..++.|++.||.|||+.++.|.|+.
T Consensus        87 ~~~i~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~  127 (256)
T cd05113          87 LNYLREH------GKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLA  127 (256)
T ss_pred             HHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccC
Confidence            9998753      2247889999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.76  E-value=2.6e-17  Score=113.95  Aligned_cols=114  Identities=26%  Similarity=0.495  Sum_probs=96.8

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCCh
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSL  108 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L  108 (156)
                      +.||+|+||.||++.... +..+++|........  ...+.+|+.++..+.|+|++++.+.+...    +++||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            368999999999998764 888999987643322  25688999999999999999999988776    99999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+++...      ...+++..+..++.|++.||.|||++++.|+|+.
T Consensus        81 ~~~~~~~------~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~  121 (252)
T cd05084          81 LTFLRTE------GPRLKVKELIQMVENAAAGMEYLESKHCIHRDLA  121 (252)
T ss_pred             HHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccc
Confidence            9998653      2347788999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.76  E-value=2.1e-17  Score=114.93  Aligned_cols=122  Identities=24%  Similarity=0.401  Sum_probs=104.3

Q ss_pred             hhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           29 KMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        29 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .....+.+.||+|+||.||++...++..+++|.+.........+.+|+.+++.+.|+|++++.+.+...    +++||++
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   84 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS   84 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence            334456678999999999999877777899999886555557789999999999999999999988764    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++....     ...++...+..++.|++.|+.|||++++.|.||.
T Consensus        85 ~~~L~~~i~~~~-----~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~  130 (261)
T cd05034          85 KGSLLDFLKSGE-----GKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLA  130 (261)
T ss_pred             CCCHHHHHhccc-----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcc
Confidence            999999997642     3457889999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.76  E-value=1.5e-17  Score=119.65  Aligned_cols=112  Identities=14%  Similarity=0.150  Sum_probs=96.0

Q ss_pred             ccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCC
Q 047548           37 KVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGS  107 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~  107 (156)
                      .||+|+||.||++.... +..+|+|++....    .....+.+|+.++..+.|+|++++.+.+...    ++|||+++|+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~   81 (328)
T cd05593           2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE   81 (328)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence            68999999999998765 8899999987532    1225678899999999999999998888766    9999999999


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |..++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        82 L~~~l~~~-------~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDik  122 (328)
T cd05593          82 LFFHLSRE-------RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLK  122 (328)
T ss_pred             HHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccC
Confidence            99888653       347889999999999999999999999999984

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.76  E-value=5.3e-18  Score=124.23  Aligned_cols=113  Identities=16%  Similarity=0.206  Sum_probs=101.0

Q ss_pred             hhccccccCceEEEEEeCC-CcEEEEEecccCCCCh----HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           35 SDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG----EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~----~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      ..+||+|+||.||.|..++ |.-+|+|+++.+....    ..+..|-.+|....++++++++..|.+.    |+|||++|
T Consensus       146 Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPG  225 (550)
T KOG0605|consen  146 LKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPG  225 (550)
T ss_pred             heeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCC
Confidence            3689999999999999877 9999999998754322    5678888899999999999999999887    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      |++..+|...       ..+++.....++.+++.|+..+|..+.+|+||
T Consensus       226 GD~mTLL~~~-------~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDI  267 (550)
T KOG0605|consen  226 GDMMTLLMRK-------DTLTEDWARFYIAETVLAIESIHQLGYIHRDI  267 (550)
T ss_pred             ccHHHHHHhc-------CcCchHHHHHHHHHHHHHHHHHHHcCcccccC
Confidence            9999999874       45889999999999999999999999999998

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.75  E-value=7e-18  Score=123.25  Aligned_cols=116  Identities=16%  Similarity=0.166  Sum_probs=97.7

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ..+.+.||+|+||.||++.... +..+|+|.+....    .....+..|+.++..++|+|++++.+.+...    +++||
T Consensus        45 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey  124 (370)
T cd05596          45 FDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEY  124 (370)
T ss_pred             cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcC
Confidence            3455789999999999998765 8899999986421    1224577899999999999999999888776    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+|.+++...        .++......++.|++.||.|||+++++|+||.
T Consensus       125 ~~gg~L~~~l~~~--------~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLk  169 (370)
T cd05596         125 MPGGDLVNLMSNY--------DIPEKWARFYTAEVVLALDAIHSMGFIHRDVK  169 (370)
T ss_pred             CCCCcHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence            9999999988642        36788888999999999999999999999985

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=1.5e-17  Score=118.88  Aligned_cols=111  Identities=16%  Similarity=0.208  Sum_probs=95.1

Q ss_pred             cccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCCh
Q 047548           38 VRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSL  108 (156)
Q Consensus        38 lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L  108 (156)
                      ||+|+||.||++.... +..+|+|.+....    .....+..|+.++..++|+|++++.+.+...    +++||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            6999999999999765 7889999986421    1224578899999999999999998888766    99999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+++...       ..+++.....++.|++.||.|||+++++|+||.
T Consensus        81 ~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlk  120 (312)
T cd05585          81 FHHLQRE-------GRFDLSRARFYTAELLCALENLHKFNVIYRDLK  120 (312)
T ss_pred             HHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCC
Confidence            9998753       347888899999999999999999999999985

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.75  E-value=8.2e-18  Score=122.55  Aligned_cols=115  Identities=15%  Similarity=0.195  Sum_probs=98.3

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      +.+.||+|+||.||.+.... +..+|+|++.....    ....+..|+.++..++|++++++.+.+...    ++|||++
T Consensus         5 ~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~   84 (363)
T cd05628           5 SLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLP   84 (363)
T ss_pred             EeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCC
Confidence            45689999999999998765 88999999875321    124577899999999999999999888776    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        85 gg~L~~~l~~~-------~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlK  128 (363)
T cd05628          85 GGDMMTLLMKK-------DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIK  128 (363)
T ss_pred             CCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCC
Confidence            99999999753       347889999999999999999999999999984

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=1.2e-17  Score=120.23  Aligned_cols=116  Identities=18%  Similarity=0.290  Sum_probs=99.2

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.+.||+|+||.||++.... +..+|+|++....    .....+..|+.++..++|+|++++.+.+...    +++||+
T Consensus         4 ~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~   83 (333)
T cd05600           4 QILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYV   83 (333)
T ss_pred             EEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCC
Confidence            345689999999999999865 8899999987532    1225678899999999999999999888776    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++...       ..+++.....++.|++.||.|||+++++|+||.
T Consensus        84 ~g~~L~~~l~~~-------~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlk  128 (333)
T cd05600          84 PGGDFRTLLNNL-------GVLSEDHARFYMAEMFEAVDALHELGYIHRDLK  128 (333)
T ss_pred             CCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence            999999999753       347788899999999999999999999999985

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.75  E-value=4.5e-18  Score=123.56  Aligned_cols=119  Identities=17%  Similarity=0.176  Sum_probs=103.3

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc-----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG-----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----lv~e~  102 (156)
                      +.+.+++|.|+||.++....+. ...+++|.+.-...   .++....|+.+++.+.||||+.+.+.+...     ++|+|
T Consensus         6 Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y   85 (426)
T KOG0589|consen    6 YEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEY   85 (426)
T ss_pred             hhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEee
Confidence            4456799999999999988765 77899999875432   335688999999999999999999998877     89999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++||++.+.++...     ...+++..+..++.|++.|+.|||+++++|+|+-
T Consensus        86 ~eGg~l~~~i~~~k-----~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK  133 (426)
T KOG0589|consen   86 CEGGDLAQLIKEQK-----GVLFPEERILKWFVQILLAVNYLHENRVLHRDLK  133 (426)
T ss_pred             cCCCCHHHHHHHHh-----hccccHHHHHHHHHHHHHHHHHHHhhhhhcccch
Confidence            99999999998753     3558899999999999999999999999999974

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.75  E-value=1.4e-17  Score=117.03  Aligned_cols=113  Identities=22%  Similarity=0.325  Sum_probs=93.1

Q ss_pred             ccccccCceEEEEEeCC-------------------------CcEEEEEecccCCCCh-HHHHHHHHHHcCCCCCCcccc
Q 047548           37 KVRQGGYGVVYRGKLHE-------------------------GRVAAVKVLSESMGNG-EEFINEVACISGTSHVNIVTP   90 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-------------------------~~~~a~k~~~~~~~~~-~~~~~e~~~l~~l~~~~i~~l   90 (156)
                      .||+|+||.||++....                         ...+++|.+....... ..+.+++.++..++|+|++++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            58999999999987421                         2357888876543222 467888899999999999999


Q ss_pred             ceeeecc----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           91 LGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        91 ~~~~~~~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+++...    +++||+++++|..++...      ...+++..+..++.|++.||.|||+++++|+|+.
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~------~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlk  144 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE------KGRVPVAWKITVAQQLASALSYLEDKNLVHGNVC  144 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCC
Confidence            9998776    999999999999988653      2347788899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.75  E-value=1.6e-17  Score=115.61  Aligned_cols=124  Identities=18%  Similarity=0.309  Sum_probs=103.5

Q ss_pred             HHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc---eeeecC
Q 047548           27 VKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG---LVYEFM  103 (156)
Q Consensus        27 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~~  103 (156)
                      +......+.+.||+|+||.||++....+..+++|.+.........+.+|+.++..++|+|++++.+.+...   +++||+
T Consensus         3 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~   82 (260)
T cd05073           3 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFM   82 (260)
T ss_pred             ccccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeC
Confidence            44455667789999999999999876677799998875443346788999999999999999998887666   999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++....     ....++..+..++.|++.||.|||+.++.|+||.
T Consensus        83 ~~~~L~~~~~~~~-----~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~  129 (260)
T cd05073          83 AKGSLLDFLKSDE-----GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLR  129 (260)
T ss_pred             CCCcHHHHHHhCC-----ccccCHHHHHHHHHHHHHHHHHHHhCCccccccC
Confidence            9999999997532     3346778889999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.75  E-value=1.6e-17  Score=120.06  Aligned_cols=119  Identities=17%  Similarity=0.171  Sum_probs=99.9

Q ss_pred             hhhhhhhccccccCceEEEEEeCC--CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----ee
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE--GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LV   99 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~--~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv   99 (156)
                      ....+.+.||+|+||.||++....  +..+|+|.+....    ...+.+.+|+.++..++|+|++++.+.+...    ++
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv  109 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV  109 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence            344566789999999999998644  4689999886421    1235678899999999999999999998876    89


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++|+|.+++...       ..+++.....++.|++.||.|||+++++|+|+.
T Consensus       110 ~Ey~~~g~L~~~i~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLk  158 (340)
T PTZ00426        110 LEFVIGGEFFTFLRRN-------KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLK  158 (340)
T ss_pred             EeCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCC
Confidence            9999999999999753       347888999999999999999999999999984

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.75  E-value=2.1e-17  Score=115.82  Aligned_cols=118  Identities=25%  Similarity=0.379  Sum_probs=98.7

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCC-ccccceeeecc----------
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVN-IVTPLGICCEG----------   97 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~-i~~l~~~~~~~----------   97 (156)
                      ...+.+|+|+||.||+|..+. |..||+|.+.....+   .....+|+.+++.++|+| ++.+.+.+-..          
T Consensus        14 ~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~   93 (323)
T KOG0594|consen   14 EKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLY   93 (323)
T ss_pred             HHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEE
Confidence            344579999999999999765 889999999865442   256789999999999999 99999887763          


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +++||+.. +|.+++......   ...++...+..++.|++.||+|||+++++|+|+
T Consensus        94 lvfe~~d~-DL~~ymd~~~~~---~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDL  146 (323)
T KOG0594|consen   94 LVFEFLDR-DLKKYMDSLPKK---PQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDL  146 (323)
T ss_pred             EEEEeecc-cHHHHHHhcccc---ccCCCHHHHHHHHHHHHHHHHHHHhCCeecccC
Confidence            79999977 999999875321   145777899999999999999999999999997

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.75  E-value=1.2e-17  Score=122.42  Aligned_cols=115  Identities=10%  Similarity=0.098  Sum_probs=98.0

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      +.+.||+|+||.||++.... +..+|+|.+.....    ....+.+|+.++..+.|++++++++.+...    ++|||++
T Consensus         5 ~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~   84 (382)
T cd05625           5 KIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIP   84 (382)
T ss_pred             EEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCC
Confidence            44689999999999998765 88999999875321    124678899999999999999999998876    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        85 gg~L~~~l~~~-------~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlK  128 (382)
T cd05625          85 GGDMMSLLIRM-------GIFPEDLARFYIAELTCAVESVHKMGFIHRDIK  128 (382)
T ss_pred             CCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            99999998753       336788888999999999999999999999984

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.75  E-value=1.9e-17  Score=115.45  Aligned_cols=118  Identities=26%  Similarity=0.443  Sum_probs=100.9

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGS  107 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~  107 (156)
                      .+.+.+|+|++|.||++.... +..+++|.+.........+.+|+.++..+.|++++++.+.+...    +++||+++++
T Consensus         9 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   88 (263)
T cd05052           9 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN   88 (263)
T ss_pred             EEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCc
Confidence            455689999999999999765 78899999875543446788999999999999999999988766    8999999999


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |.+++....     ...+++..+..++.|++.||.|||++++.|+||.
T Consensus        89 L~~~~~~~~-----~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlk  131 (263)
T cd05052          89 LLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA  131 (263)
T ss_pred             HHHHHHhCC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccC
Confidence            999986532     3347888899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.75  E-value=2.8e-17  Score=114.27  Aligned_cols=120  Identities=22%  Similarity=0.395  Sum_probs=103.4

Q ss_pred             hhhhhhccccccCceEEEEEeCCCcEEEEEecccCCC-ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMG-NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      ...+.+++|+|+||.||++....+..+++|.+..... ....+..|+.++..++|+|++++.+.+...    +++||+++
T Consensus         7 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   86 (261)
T cd05148           7 EFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEK   86 (261)
T ss_pred             HHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeeccc
Confidence            3456689999999999999987788899999876543 346788999999999999999999988776    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++....     ...+++..+..++.|++.|+.|||++++.|+|+.
T Consensus        87 ~~L~~~~~~~~-----~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~  131 (261)
T cd05148          87 GSLLAFLRSPE-----GQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLA  131 (261)
T ss_pred             CCHHHHHhcCC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccC
Confidence            99999997642     3447888999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.75  E-value=4.9e-18  Score=128.24  Aligned_cols=118  Identities=19%  Similarity=0.312  Sum_probs=102.2

Q ss_pred             hhhhccccccCceEEEEEeCC----CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc---eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG---LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~~  103 (156)
                      .+.+.||+|+||.|+.|.|..    ...||||++.....  ...+|.+|+.++..++|+|+++|+|++.+.   +|+|++
T Consensus       113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~ELa  192 (1039)
T KOG0199|consen  113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFELA  192 (1039)
T ss_pred             HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhhc
Confidence            455789999999999999864    34789999987443  347899999999999999999999999977   999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +.|+|.+.|+...     ...+....+..++.||+.||.||-+++.+|+|+-
T Consensus       193 plGSLldrLrka~-----~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLA  239 (1039)
T KOG0199|consen  193 PLGSLLDRLRKAK-----KAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLA  239 (1039)
T ss_pred             ccchHHHHHhhcc-----ccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhh
Confidence            9999999998721     3456778999999999999999999999999974

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.74  E-value=7.5e-18  Score=123.08  Aligned_cols=117  Identities=15%  Similarity=0.180  Sum_probs=98.6

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ...+.+.||+|+||.||++.... +..+|+|.+....    .....+.+|+.++..++|+|++++.+.+...    +++|
T Consensus        44 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~E  123 (370)
T cd05621          44 DYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVME  123 (370)
T ss_pred             HCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEc
Confidence            34455789999999999999765 7889999986421    1224577899999999999999999988776    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++|+|.+++...        .++......++.|++.||.|||+++++|+||.
T Consensus       124 y~~gg~L~~~l~~~--------~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLK  169 (370)
T cd05621         124 YMPGGDLVNLMSNY--------DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVK  169 (370)
T ss_pred             CCCCCcHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCC
Confidence            99999999998642        36788889999999999999999999999984

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=2.3e-17  Score=118.80  Aligned_cols=117  Identities=16%  Similarity=0.192  Sum_probs=98.7

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.+.||+|+||.||.+.... +..+|+|++....    ...+.+..|..++..++|++++.+.+.+...    +++||+
T Consensus         4 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   83 (331)
T cd05597           4 EILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYY   83 (331)
T ss_pred             eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecC
Confidence            345789999999999999765 8899999986421    1224577889999999999999999988776    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|+|.+++...      ...+++..+..++.|++.||.|||+++++|+|+.
T Consensus        84 ~g~~L~~~l~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlk  129 (331)
T cd05597          84 VGGDLLTLLSKF------EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIK  129 (331)
T ss_pred             CCCcHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCC
Confidence            999999999753      2347888899999999999999999999999974

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.74  E-value=6.9e-18  Score=123.93  Aligned_cols=115  Identities=21%  Similarity=0.252  Sum_probs=99.1

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeec
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      .|++.||+|+|++|++|.... +..+|+|++...-.    ..+-...|-.+|..+ .||.+++|+..|.+.    +++||
T Consensus        76 ~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~  155 (604)
T KOG0592|consen   76 KFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEY  155 (604)
T ss_pred             chhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEe
Confidence            567899999999999999766 89999999875321    113356677778888 899999999999887    89999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +++|+|.++|+..+       .+++.+...++.+|+.|++|||+++++|+|+
T Consensus       156 A~nGdll~~i~K~G-------sfde~caR~YAAeIldAleylH~~GIIHRDl  200 (604)
T KOG0592|consen  156 APNGDLLDLIKKYG-------SFDETCARFYAAEILDALEYLHSNGIIHRDL  200 (604)
T ss_pred             cCCCcHHHHHHHhC-------cchHHHHHHHHHHHHHHHHHHHhcCceeccC
Confidence            99999999998854       3889999999999999999999999999997

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.74  E-value=3.1e-17  Score=118.10  Aligned_cols=113  Identities=18%  Similarity=0.174  Sum_probs=95.7

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      ++||+|+||.||++.... +..+|+|+++....    ....+..|..++..+ +|+|++++.+.+...    +++||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            368999999999999765 88999999975321    124577888888887 799999999988776    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        81 g~L~~~~~~~-------~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlk  123 (329)
T cd05588          81 GDLMFHMQRQ-------RKLPEEHARFYSAEISLALNFLHERGIIYRDLK  123 (329)
T ss_pred             CCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCC
Confidence            9999888653       348899999999999999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.74  E-value=2.5e-17  Score=113.41  Aligned_cols=121  Identities=21%  Similarity=0.309  Sum_probs=102.5

Q ss_pred             CChHHHHhhhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeec
Q 047548           22 YNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCE   96 (156)
Q Consensus        22 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~   96 (156)
                      +++.+...     ..+||.|+||.|...+.+. +.-+|+|++....    +..+...+|..+|+.+.||.++++.+.+.+
T Consensus        41 ~~l~dfe~-----~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d  115 (355)
T KOG0616|consen   41 YSLQDFER-----LKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD  115 (355)
T ss_pred             cchhhhhh-----eeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeecc
Confidence            55554433     3489999999999999876 8899999997532    122567889999999999999999988887


Q ss_pred             c----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548           97 G----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus        97 ~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      .    ++|||++||.|..++++.+       .++++....++.||+.|+.|||++.++.+|.
T Consensus       116 ~~~lymvmeyv~GGElFS~Lrk~~-------rF~e~~arFYAAeivlAleylH~~~iiYRDL  170 (355)
T KOG0616|consen  116 NSNLYMVMEYVPGGELFSYLRKSG-------RFSEPHARFYAAEIVLALEYLHSLDIIYRDL  170 (355)
T ss_pred             CCeEEEEEeccCCccHHHHHHhcC-------CCCchhHHHHHHHHHHHHHHHHhcCeeeccC
Confidence            7    9999999999999998743       3888999999999999999999999999886

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.74  E-value=3.2e-17  Score=120.84  Aligned_cols=90  Identities=21%  Similarity=0.372  Sum_probs=72.2

Q ss_pred             HHHHhhhhhhhhccccccCceEEEEEeCC------CcEEEEEecccCCCC--hHHHHHHHHHHcCCC-CCCccccceeee
Q 047548           25 SDVKKMTNSFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGN--GEEFINEVACISGTS-HVNIVTPLGICC   95 (156)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~-~~~i~~l~~~~~   95 (156)
                      ++++.....+.+.||+|+||.||+|....      +..||+|.+......  .+.+.+|+.++..+. |+|++++.+++.
T Consensus        32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~  111 (400)
T cd05105          32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT  111 (400)
T ss_pred             eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence            34445555677899999999999998532      347999998754332  256889999999995 999999999987


Q ss_pred             cc----eeeecCCCCChHHHhhh
Q 047548           96 EG----LVYEFMSNGSLHKFIYD  114 (156)
Q Consensus        96 ~~----lv~e~~~~g~L~~~l~~  114 (156)
                      ..    +++||+++|+|.+++..
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~  134 (400)
T cd05105         112 KSGPIYIITEYCFYGDLVNYLHK  134 (400)
T ss_pred             cCCceEEEEEecCCCcHHHHHHH
Confidence            76    99999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.74  E-value=4.9e-17  Score=114.94  Aligned_cols=116  Identities=22%  Similarity=0.321  Sum_probs=97.0

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      .+.+.||+|+||.||++.... +..+|+|.+.....  ....+.+|+.++..++|+|++++.+.+...    +++||+++
T Consensus         8 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   87 (288)
T cd07871           8 VKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDS   87 (288)
T ss_pred             eEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc
Confidence            345689999999999998765 88999998865322  224678899999999999999999988766    99999975


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       +|.+++...      ...++...+..++.|++.||+|||+++++|+|+.
T Consensus        88 -~l~~~l~~~------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlk  130 (288)
T cd07871          88 -DLKQYLDNC------GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLK  130 (288)
T ss_pred             -CHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence             899988654      2346788899999999999999999999999984

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.74  E-value=3.9e-17  Score=116.99  Aligned_cols=113  Identities=18%  Similarity=0.192  Sum_probs=95.6

Q ss_pred             hccccccCceEEEEEeC----CCcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           36 DKVRQGGYGVVYRGKLH----EGRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~----~~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      +.||+|+||.||++...    .+..+|+|++.....   ....+..|+.++..++|+|++++.+.+...    +++||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            46899999999988742    378999999875321   224567899999999999999999988776    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++...       ..+++..+..++.|++.||.|||+.+++|+||.
T Consensus        82 ~~~L~~~l~~~-------~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  125 (318)
T cd05582          82 GGDLFTRLSKE-------VMFTEEDVKFYLAELALALDHLHSLGIIYRDLK  125 (318)
T ss_pred             CCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCC
Confidence            99999998653       347889999999999999999999999999985

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.74  E-value=7.7e-18  Score=129.00  Aligned_cols=116  Identities=22%  Similarity=0.381  Sum_probs=100.2

Q ss_pred             hhccccccCceEEEEEeCC-----CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc---eeeecCC
Q 047548           35 SDKVRQGGYGVVYRGKLHE-----GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG---LVYEFMS  104 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-----~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~~~  104 (156)
                      ..+||+|+||+||+|.|-.     +-+||+|++.....  ....+..|+-.+..+.|+|+++++++|...   ++.+|++
T Consensus       701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~mP  780 (1177)
T KOG1025|consen  701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQLMP  780 (1177)
T ss_pred             hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHhcc
Confidence            3589999999999998632     45788998876433  346799999999999999999999999888   9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccC
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIST  156 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~~  156 (156)
                      .|+|.++++.++      ...-....+.++.||++||.|||.+..+|+|+-|
T Consensus       781 ~G~LlDyvr~hr------~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaa  826 (1177)
T KOG1025|consen  781 LGCLLDYVREHR------DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAA  826 (1177)
T ss_pred             cchHHHHHHHhh------ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhh
Confidence            999999999864      3467789999999999999999999999999853

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.74  E-value=2.6e-17  Score=116.13  Aligned_cols=116  Identities=21%  Similarity=0.209  Sum_probs=97.0

Q ss_pred             hhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           35 SDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      .+.||+|+||.||++.... +..+|+|.+.....    ....+.+|+.++..+.|++++.+.+.+...    +++||+++
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~   84 (285)
T cd05631           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNG   84 (285)
T ss_pred             EEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCC
Confidence            4679999999999998754 88999998864321    123577899999999999999999887765    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+|.+.+....     ...+++.....++.|++.||.|||+.+++|+||.
T Consensus        85 g~L~~~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dik  129 (285)
T cd05631          85 GDLKFHIYNMG-----NPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLK  129 (285)
T ss_pred             CcHHHHHHhhC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCC
Confidence            99988876432     3347888999999999999999999999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.74  E-value=5.2e-17  Score=114.37  Aligned_cols=115  Identities=21%  Similarity=0.212  Sum_probs=94.7

Q ss_pred             cccccCceEEEEEeCC-CcEEEEEecccCCCC----hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCCh
Q 047548           38 VRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN----GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSL  108 (156)
Q Consensus        38 lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L  108 (156)
                      ||+|+||.||.+.... +..+|+|.+......    .+.+..|+.++..++|++++++.+.+...    ++|||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            6899999999998764 889999988643211    14567899999999999999998887765    99999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ...+.....   .+..+++..+..++.|++.||.|||+++++|+||.
T Consensus        81 ~~~~~~~~~---~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  124 (280)
T cd05608          81 RYHIYNVDE---ENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLK  124 (280)
T ss_pred             HHHHHhccc---cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            888754221   13457889999999999999999999999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.74  E-value=8.1e-17  Score=112.39  Aligned_cols=118  Identities=24%  Similarity=0.442  Sum_probs=99.0

Q ss_pred             hhhhhccccccCceEEEEEeCC----CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ..+.+.||+|+||.||++....    ...+++|.+.......  ..+..|+.++..++|+|++++.+.+...    +++|
T Consensus         6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e   85 (266)
T cd05033           6 VTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITE   85 (266)
T ss_pred             ceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEE
Confidence            3456789999999999998742    4578999887543222  4688899999999999999999988765    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++++|.+++...      ...+++..+..++.|++.|+.|||++++.|+||.
T Consensus        86 ~~~~~~L~~~~~~~------~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~  133 (266)
T cd05033          86 YMENGSLDKFLREN------DGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLA  133 (266)
T ss_pred             cCCCCCHHHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            99999999998764      2347889999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=6.3e-17  Score=113.73  Aligned_cols=119  Identities=20%  Similarity=0.304  Sum_probs=101.5

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      ...+.+.||+|+||.||++.... +..+++|.+...... .+.+..|+.++..++|+|++++.+.+...    +++||++
T Consensus         6 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (280)
T cd06611           6 IWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCD   85 (280)
T ss_pred             HHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccC
Confidence            44566789999999999998754 788999988654322 25688999999999999999999988776    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++...      ...+++..+..++.|++.||.|||+++++|+|+.
T Consensus        86 ~~~L~~~~~~~------~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~  130 (280)
T cd06611          86 GGALDSIMLEL------ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLK  130 (280)
T ss_pred             CCcHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            99999998754      3448889999999999999999999999999985

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.73  E-value=4.8e-17  Score=113.53  Aligned_cols=114  Identities=23%  Similarity=0.293  Sum_probs=94.1

Q ss_pred             hccccccCceEEEEEeCC-------------CcEEEEEecccCCCCh-HHHHHHHHHHcCCCCCCccccceeeecc----
Q 047548           36 DKVRQGGYGVVYRGKLHE-------------GRVAAVKVLSESMGNG-EEFINEVACISGTSHVNIVTPLGICCEG----   97 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-------------~~~~a~k~~~~~~~~~-~~~~~e~~~l~~l~~~~i~~l~~~~~~~----   97 (156)
                      +.||+|+||.||++....             ...+++|.+....... ..+..++.++..+.|+|++++.+.+...    
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            368999999999997532             2357888876543332 4678888999999999999999988775    


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++||+++++|..++...      ...+++..+..++.|++.||.|||+++++|+|+.
T Consensus        81 lv~e~~~~~~l~~~~~~~------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlk  132 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRK------SDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVC  132 (262)
T ss_pred             EEEecccCCCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCC
Confidence            999999999998888654      3347888999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.73  E-value=2.9e-17  Score=118.14  Aligned_cols=117  Identities=16%  Similarity=0.151  Sum_probs=99.2

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.+.||+|+||.||++.... +..+|+|.+.....    ..+.+..|+.++..+.|++++++.+.+...    +++||+
T Consensus         4 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   83 (330)
T cd05601           4 DVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQ   83 (330)
T ss_pred             eEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCC
Confidence            345789999999999998765 88999999875322    224577889999999999999998887765    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        84 ~~~~L~~~l~~~------~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlk  129 (330)
T cd05601          84 PGGDLLSLLNRY------EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIK  129 (330)
T ss_pred             CCCCHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCc
Confidence            999999999764      2458889999999999999999999999999985

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=4.3e-17  Score=115.06  Aligned_cols=117  Identities=21%  Similarity=0.216  Sum_probs=97.5

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      ..++||+|+||.||++.... +..+|+|.+.....    ....+.+|+.++..++|++++.+.+.+...    +++||++
T Consensus         4 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   83 (285)
T cd05605           4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMN   83 (285)
T ss_pred             EEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccC
Confidence            34689999999999998754 88999998864321    123467899999999999999999888765    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++....     ...+++..+..++.|++.||.|||+.+++|+||.
T Consensus        84 ~~~L~~~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlk  129 (285)
T cd05605          84 GGDLKFHIYNMG-----NPGFDEERAVFYAAEITCGLEDLHRERIVYRDLK  129 (285)
T ss_pred             CCcHHHHHHhcC-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCC
Confidence            999998886532     3447889999999999999999999999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.73  E-value=6.1e-17  Score=112.33  Aligned_cols=114  Identities=21%  Similarity=0.353  Sum_probs=94.9

Q ss_pred             hccccccCceEEEEEeCC-C----------cEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc---eeee
Q 047548           36 DKVRQGGYGVVYRGKLHE-G----------RVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG---LVYE  101 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~----------~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e  101 (156)
                      +.||+|+||.||++.... +          ..+++|.+.........+.+|+.+++.++|+|++++.+.+...   +++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e   80 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVEE   80 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEEE
Confidence            368999999999998764 3          2567777665433356788999999999999999999987644   9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++++|.+++....      ..++...+..++.|++.||.|||+++++|+||.
T Consensus        81 ~~~~~~L~~~l~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlk  128 (259)
T cd05037          81 YVKFGPLDVFLHREK------NNVSLHWKLDVAKQLASALHYLEDKKLVHGNVC  128 (259)
T ss_pred             cCCCCcHHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHhhCCeecccCc
Confidence            999999999997642      247888999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.73  E-value=7.8e-17  Score=112.12  Aligned_cols=113  Identities=24%  Similarity=0.408  Sum_probs=95.4

Q ss_pred             ccccccCceEEEEEeC--C-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc---eeeecCCCCCh
Q 047548           37 KVRQGGYGVVYRGKLH--E-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG---LVYEFMSNGSL  108 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~--~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~~~~g~L  108 (156)
                      .||+|+||.||++.+.  . +..+++|.+......  .+.+.+|+.++..++|+|++++.+.+...   +++||+++++|
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L   81 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL   81 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence            4899999999999764  2 557899988754322  25688999999999999999999987665   99999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+++...      ...+++..++.++.|++.||.|||+++++|+|+.
T Consensus        82 ~~~l~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk  122 (257)
T cd05115          82 NKFLSGK------KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLA  122 (257)
T ss_pred             HHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccc
Confidence            9998653      3347889999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.73  E-value=4.7e-17  Score=116.92  Aligned_cols=112  Identities=15%  Similarity=0.135  Sum_probs=94.7

Q ss_pred             ccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCC
Q 047548           37 KVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGS  107 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~  107 (156)
                      .||+|+||.||.+.... +..+|+|.+.....    ....+..|+.++..+.|+|++++.+.+...    ++|||+++|+
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~   81 (325)
T cd05594           2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE   81 (325)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence            68999999999998754 88999999875321    124567889999999999999998887766    9999999999


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA-VATLGLCIS  155 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~-~~~~h~~i~  155 (156)
                      |..++...       ..+++..+..++.|++.||.|||+ .+++|+||.
T Consensus        82 L~~~l~~~-------~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDik  123 (325)
T cd05594          82 LFFHLSRE-------RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLK  123 (325)
T ss_pred             HHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCC
Confidence            99888653       347889999999999999999997 799999984

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.73  E-value=6.2e-17  Score=116.71  Aligned_cols=119  Identities=19%  Similarity=0.273  Sum_probs=99.7

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ..+.+.+.||+|+||.||++.... +..+++|.+.......  ..+.+|+.++..++|+|++++.+.+...    +++||
T Consensus         5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   84 (333)
T cd06650           5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   84 (333)
T ss_pred             hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence            344566789999999999999765 7888999877543222  5688999999999999999999998876    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV-ATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~-~~~h~~i~  155 (156)
                      +++++|.+++...       ..++......++.|++.||.|||+. +++|+|+.
T Consensus        85 ~~~~~L~~~l~~~-------~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlk  131 (333)
T cd06650          85 MDGGSLDQVLKKA-------GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK  131 (333)
T ss_pred             CCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCC
Confidence            9999999999753       3367888899999999999999985 68999874

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.73  E-value=7.6e-17  Score=114.69  Aligned_cols=117  Identities=24%  Similarity=0.345  Sum_probs=97.3

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      +.+.+.||+|+||.||++.... +..+|+|.+......  ...+.+|+.+++.++|+|++++.+.+...    +++||++
T Consensus         7 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   86 (303)
T cd07869           7 YEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH   86 (303)
T ss_pred             ceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC
Confidence            3456789999999999999764 889999998753322  24577899999999999999999988776    9999996


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       ++|.+++...      ...++...+..++.|++.||.|||+++++|+||.
T Consensus        87 -~~l~~~~~~~------~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlk  130 (303)
T cd07869          87 -TDLCQYMDKH------PGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLK  130 (303)
T ss_pred             -cCHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence             5888888654      2347788889999999999999999999999984

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.73  E-value=1.3e-16  Score=117.57  Aligned_cols=90  Identities=23%  Similarity=0.445  Sum_probs=73.6

Q ss_pred             HHHHhhhhhhhhccccccCceEEEEEeCC------CcEEEEEecccCCCCh--HHHHHHHHHHcCCC-CCCccccceeee
Q 047548           25 SDVKKMTNSFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGNG--EEFINEVACISGTS-HVNIVTPLGICC   95 (156)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~-~~~i~~l~~~~~   95 (156)
                      ++++.....+.+.||+|+||.||++.+.+      +..||+|.+.......  +.+.+|+.++..+. |+|++++.+.+.
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~  111 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT  111 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence            45555556677899999999999998632      4579999997643322  46889999999996 999999999988


Q ss_pred             cc----eeeecCCCCChHHHhhh
Q 047548           96 EG----LVYEFMSNGSLHKFIYD  114 (156)
Q Consensus        96 ~~----lv~e~~~~g~L~~~l~~  114 (156)
                      ..    +++||+++|+|.+++..
T Consensus       112 ~~~~~~iv~E~~~~g~L~~~l~~  134 (401)
T cd05107         112 KGGPIYIITEYCRYGDLVDYLHR  134 (401)
T ss_pred             cCCCcEEEEeccCCCcHHHHHHh
Confidence            76    99999999999999965

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.73  E-value=1.9e-17  Score=126.91  Aligned_cols=117  Identities=20%  Similarity=0.284  Sum_probs=98.6

Q ss_pred             hhhhccccccCceEEEEEeCCC-cEEEEEecccCCCCh-HHHHHHHHHHcCCC-CCCcccccee-eecc----------e
Q 047548           33 SFSDKVRQGGYGVVYRGKLHEG-RVAAVKVLSESMGNG-EEFINEVACISGTS-HVNIVTPLGI-CCEG----------L   98 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~~-~~~a~k~~~~~~~~~-~~~~~e~~~l~~l~-~~~i~~l~~~-~~~~----------l   98 (156)
                      .+.++|.+|+|+.||.+....+ ..+|+|.+-...... +.+.+|+.+++.++ |+|||.+++. ....          +
T Consensus        40 ~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Evll  119 (738)
T KOG1989|consen   40 TVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLL  119 (738)
T ss_pred             EEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEe
Confidence            3457899999999999998664 899999887653333 67899999999995 9999999983 2221          8


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA--TLGLCI  154 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~--~~h~~i  154 (156)
                      +||||.+|+|-+++....     ...+++..+++|+.|+++|+++||...  ++|+||
T Consensus       120 LmEyC~gg~Lvd~mn~Rl-----q~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDL  172 (738)
T KOG1989|consen  120 LMEYCKGGSLVDFMNTRL-----QTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDL  172 (738)
T ss_pred             ehhhccCCcHHHHHHHHH-----hccCChHHHHHHHHHHHHHHHHHhcCCCccchhhh
Confidence            999999999999998654     445999999999999999999999997  999997

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=3.8e-17  Score=117.75  Aligned_cols=120  Identities=23%  Similarity=0.270  Sum_probs=104.9

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCC--CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM--GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ..+.+.++||.|..++||.+.... ++.||+|++.-..  .+...+.+|+..++.++||||++++..|...    +||.|
T Consensus        26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpf  105 (516)
T KOG0582|consen   26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPF  105 (516)
T ss_pred             cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehh
Confidence            345667899999999999998654 8999999997533  2347899999999999999999999988887    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      |.+|++.+.++..-     ...+.+..+..+.+++++||.|||.++-+|+|+
T Consensus       106 Ma~GS~ldIik~~~-----~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdv  152 (516)
T KOG0582|consen  106 MAGGSLLDIIKTYY-----PDGLEEASIATILREVLKALDYLHQNGHIHRDV  152 (516)
T ss_pred             hcCCcHHHHHHHHc-----cccccHHHHHHHHHHHHHHHHHHHhcCceeccc
Confidence            99999999998753     345889999999999999999999999999997

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.73  E-value=1.1e-17  Score=117.64  Aligned_cols=113  Identities=26%  Similarity=0.308  Sum_probs=93.4

Q ss_pred             hhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc---------eeeecCC
Q 047548           35 SDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG---------LVYEFMS  104 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---------lv~e~~~  104 (156)
                      .+++|.|+||.||.+.... ++.+|+|.......   ---+|+.+++.+.||||+++.-++...         +|+||+|
T Consensus        29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r---~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP  105 (364)
T KOG0658|consen   29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR---YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP  105 (364)
T ss_pred             eEEEeecccceEEEEEEcCCCceeEEEEecCCCC---cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch
Confidence            3589999999999999766 78999987654332   224788899999999999998776654         8999998


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      . +|++.++...   ..+..++...+..+..|+.+||+|||+.++.|+||
T Consensus       106 ~-tL~~~~r~~~---~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDI  151 (364)
T KOG0658|consen  106 E-TLYRVIRHYT---RANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDI  151 (364)
T ss_pred             H-HHHHHHHHHh---hcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCC
Confidence            8 9999998531   11566888889999999999999999999999998

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.72  E-value=6.2e-17  Score=117.52  Aligned_cols=111  Identities=21%  Similarity=0.293  Sum_probs=93.0

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      +.+.||+|+||.||++.... +..+++|.+......  ...+.+|+.++..++|+|++++.+.+...    +++||++++
T Consensus        78 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  157 (353)
T PLN00034         78 RVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGG  157 (353)
T ss_pred             hhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCC
Confidence            44689999999999998765 889999998654322  25688999999999999999999988776    899999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|....           ...+..+..++.|++.||.|||+++++|+||.
T Consensus       158 ~L~~~~-----------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk  195 (353)
T PLN00034        158 SLEGTH-----------IADEQFLADVARQILSGIAYLHRRHIVHRDIK  195 (353)
T ss_pred             cccccc-----------cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCC
Confidence            885422           24567788899999999999999999999984

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.72  E-value=9.5e-17  Score=113.01  Aligned_cols=117  Identities=26%  Similarity=0.444  Sum_probs=97.1

Q ss_pred             hhhhccccccCceEEEEEeC-----CCcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc------eee
Q 047548           33 SFSDKVRQGGYGVVYRGKLH-----EGRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG------LVY  100 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~-----~~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv~  100 (156)
                      .+.+.||+|+||.||.+...     .+..+++|.+...... .+.+.+|+.++..++|+|++++.+.+...      +++
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   86 (284)
T cd05081           7 KFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVM   86 (284)
T ss_pred             eeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEE
Confidence            34568999999999998753     2778999998754322 25788999999999999999998876432      899


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++++|.+++...      ...+++..+..++.|++.||.|||++++.|+||.
T Consensus        87 e~~~~~~L~~~l~~~------~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlk  135 (284)
T cd05081          87 EYLPYGSLRDYLQKH------RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLA  135 (284)
T ss_pred             EecCCCCHHHHHHhc------CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Confidence            999999999999653      2337888999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.72  E-value=5.7e-17  Score=116.76  Aligned_cols=116  Identities=21%  Similarity=0.290  Sum_probs=98.2

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      .+.+.||+|+||.||++.... +..+|+|.+......  ...+.+|+.++..++|+|++++.+.+...    +++||+++
T Consensus         8 ~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   87 (331)
T cd06649           8 ERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG   87 (331)
T ss_pred             eEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCC
Confidence            445689999999999999765 788999988754322  25688999999999999999999988765    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV-ATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~-~~~h~~i~  155 (156)
                      ++|.+++...       ..+++..+..++.|++.||.|||+. .++|+|+.
T Consensus        88 ~~L~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlk  131 (331)
T cd06649          88 GSLDQVLKEA-------KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVK  131 (331)
T ss_pred             CcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCC
Confidence            9999999753       3377889999999999999999986 58999974

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.72  E-value=8.5e-17  Score=115.21  Aligned_cols=112  Identities=17%  Similarity=0.193  Sum_probs=92.0

Q ss_pred             ccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcC-CCCCCccccceeeecc----eeeecCCCC
Q 047548           37 KVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISG-TSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~-l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      +||+|+||.||++.... +..+|+|++....    ...+....|..++.. ..|+|++++.+.+...    +++||+++|
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg   81 (316)
T cd05592           2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG   81 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence            68999999999999765 7889999987532    122345566666654 4899999999888766    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|..++...       ..++...+..++.|++.||.|||+++++|+||.
T Consensus        82 ~L~~~~~~~-------~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlk  123 (316)
T cd05592          82 DLMFHIQSS-------GRFDEARARFYAAEIICGLQFLHKKGIIYRDLK  123 (316)
T ss_pred             cHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCC
Confidence            999988753       347888889999999999999999999999984

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.72  E-value=8e-17  Score=115.35  Aligned_cols=112  Identities=17%  Similarity=0.215  Sum_probs=93.5

Q ss_pred             ccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcC-CCCCCccccceeeecc----eeeecCCCC
Q 047548           37 KVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISG-TSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~-l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      .||+|+||.||++.... +..+|+|.+....    ........|..++.. ..|++++++.+.+...    +++||+++|
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g   81 (316)
T cd05619           2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG   81 (316)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence            68999999999999765 7899999987532    122456667777775 4899999999988776    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++...       ..+++.....++.|++.||.|||+++++|+||.
T Consensus        82 ~L~~~l~~~-------~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdik  123 (316)
T cd05619          82 DLMFHIQSC-------HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLK  123 (316)
T ss_pred             cHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCC
Confidence            999998753       337788889999999999999999999999984

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.72  E-value=6.5e-17  Score=117.70  Aligned_cols=115  Identities=14%  Similarity=0.200  Sum_probs=97.9

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      +.+.||+|+||.||.+.... +..+|+|.+....    .....+..|+.++..++|++++++.+.+...    +++||++
T Consensus         5 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~   84 (360)
T cd05627           5 SLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLP   84 (360)
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCC
Confidence            34689999999999998765 8899999986421    1224677899999999999999999888776    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        85 gg~L~~~l~~~-------~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLk  128 (360)
T cd05627          85 GGDMMTLLMKK-------DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIK  128 (360)
T ss_pred             CccHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCC
Confidence            99999998753       347888999999999999999999999999984

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.72  E-value=5.8e-17  Score=116.73  Aligned_cols=117  Identities=16%  Similarity=0.177  Sum_probs=97.9

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.+.||+|+||.||++.... +..+|+|.+....    .....+..|..++..+.|++++.+.+.+...    +++||+
T Consensus         4 ~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~   83 (331)
T cd05624           4 EIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYY   83 (331)
T ss_pred             eEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCC
Confidence            345789999999999998765 7889999986421    1224577888899999999999999888776    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|+|.+++...      ...+++.....++.|++.||.|||+++++|+||.
T Consensus        84 ~gg~L~~~l~~~------~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlk  129 (331)
T cd05624          84 VGGDLLTLLSKF------EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIK  129 (331)
T ss_pred             CCCcHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCc
Confidence            999999999763      2347788889999999999999999999999984

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=6.1e-17  Score=117.21  Aligned_cols=116  Identities=20%  Similarity=0.230  Sum_probs=99.3

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.+.||+|+||.||++.... +..+|+|.+....    .....+..|+.++..+.|++++++.+.+...    +++||+
T Consensus         4 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   83 (350)
T cd05573           4 EVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYM   83 (350)
T ss_pred             eEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCC
Confidence            345789999999999999764 8899999987532    2235678899999999999999999888766    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++...       ..++...+..++.|++.||.|||+.+++|+||.
T Consensus        84 ~~~~L~~~l~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlk  128 (350)
T cd05573          84 PGGDLMNLLIRK-------DVFPEETARFYIAELVLALDSVHKLGFIHRDIK  128 (350)
T ss_pred             CCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence            999999999763       347888999999999999999999999999985

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.72  E-value=2.6e-17  Score=121.24  Aligned_cols=113  Identities=27%  Similarity=0.351  Sum_probs=98.7

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCCCh-HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCChH
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG-EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLH  109 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~-~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L~  109 (156)
                      .++|+|+.|.||.+.-.. +..||+|.+....... +-+.+|+.+++..+|+|++.++..+...    +||||+++|+|.
T Consensus       279 ~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLT  358 (550)
T KOG0578|consen  279 KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLT  358 (550)
T ss_pred             hhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchh
Confidence            479999999999998654 7889999997644333 5688999999999999999998877766    999999999999


Q ss_pred             HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccC
Q 047548          110 KFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIST  156 (156)
Q Consensus       110 ~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~~  156 (156)
                      +.+..        ..+++.++..+|.+++.||.|||.+++.|+||-+
T Consensus       359 DvVt~--------~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKS  397 (550)
T KOG0578|consen  359 DVVTK--------TRMTEGQIAAICREILQGLKFLHARGIIHRDIKS  397 (550)
T ss_pred             hhhhc--------ccccHHHHHHHHHHHHHHHHHHHhcceeeecccc
Confidence            98864        3489999999999999999999999999999954

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.72  E-value=9.1e-17  Score=115.66  Aligned_cols=112  Identities=16%  Similarity=0.170  Sum_probs=94.0

Q ss_pred             ccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCCCC
Q 047548           37 KVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      .||+|+||.||++.... +..+|+|.+.....    ....+..|+.++..+ +|+|++++.+.+...    +++||+++|
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~   81 (329)
T cd05618           2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG   81 (329)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence            68999999999999765 78899999875321    124567788877766 899999999988776    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|..++...       ..+++.....++.|++.||.|||+++++|+||.
T Consensus        82 ~L~~~~~~~-------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dik  123 (329)
T cd05618          82 DLMFHMQRQ-------RKLPEEHARFYSAEISLALNYLHERGIIYRDLK  123 (329)
T ss_pred             CHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCC
Confidence            999888653       347889999999999999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.72  E-value=7.7e-17  Score=116.63  Aligned_cols=130  Identities=22%  Similarity=0.342  Sum_probs=101.0

Q ss_pred             HHHhhhhhhhhccccccCceEEEEEeC------CCcEEEEEecccCCCC--hHHHHHHHHHHcCC-CCCCccccceeeec
Q 047548           26 DVKKMTNSFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMGN--GEEFINEVACISGT-SHVNIVTPLGICCE   96 (156)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~l~~~~~~   96 (156)
                      +++..+..+.+.||+|+||.||++...      .+..+|+|.++.....  ...+.+|+.++..+ +|+|++++.+.+..
T Consensus         3 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   82 (343)
T cd05103           3 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK   82 (343)
T ss_pred             ccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeec
Confidence            445556677889999999999999742      2678999998754322  25688999999999 68999999987765


Q ss_pred             c-----eeeecCCCCChHHHhhhcCCCC----------------------------------------------------
Q 047548           97 G-----LVYEFMSNGSLHKFIYDKGSMS----------------------------------------------------  119 (156)
Q Consensus        97 ~-----lv~e~~~~g~L~~~l~~~~~~~----------------------------------------------------  119 (156)
                      .     +++||+++|+|.+++.......                                                    
T Consensus        83 ~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (343)
T cd05103          83 PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVE  162 (343)
T ss_pred             CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccch
Confidence            3     8999999999999986532100                                                    


Q ss_pred             --------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          120 --------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       120 --------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                              .....+++..+..++.|++.||.|||+++++|+||.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dik  206 (343)
T cd05103         163 EEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLA  206 (343)
T ss_pred             hhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCc
Confidence                    001235677888999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.72  E-value=1.1e-16  Score=114.98  Aligned_cols=113  Identities=21%  Similarity=0.275  Sum_probs=94.7

Q ss_pred             hccccccCceEEEEEeC----CCcEEEEEecccCC-----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           36 DKVRQGGYGVVYRGKLH----EGRVAAVKVLSESM-----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~----~~~~~a~k~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      +.||+|+||.||.+...    .+..+|+|++....     .....+..|+.++..++|+|++++.+.+...    +++||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            46899999999999752    37889999987521     1224567899999999999999999888776    89999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++...       ..+.......++.|++.||.|||+++++|+||.
T Consensus        82 ~~~~~L~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlk  127 (323)
T cd05584          82 LSGGELFMHLERE-------GIFMEDTACFYLSEISLALEHLHQQGIIYRDLK  127 (323)
T ss_pred             CCCchHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            9999999998753       336778888899999999999999999999985

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.72  E-value=1.2e-16  Score=114.64  Aligned_cols=113  Identities=17%  Similarity=0.169  Sum_probs=94.2

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      ++||+|+||.||++.... +..+|+|++....    .....+..|..++..+ +|++++++.+.+...    +++||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            368999999999998765 7899999987532    1224566788888765 899999999988776    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|...+...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        81 ~~L~~~l~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDik  123 (321)
T cd05591          81 GDLMFQIQRS-------RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLK  123 (321)
T ss_pred             CcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence            9999888653       347788889999999999999999999999984

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.72  E-value=2.3e-17  Score=123.71  Aligned_cols=114  Identities=19%  Similarity=0.298  Sum_probs=100.9

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      +++.||+|+.|.|-.|+... |+.+|+|++.....    ....+.+|+.+++.+.|+|++.+++.+.+.    ++.||++
T Consensus        16 LgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~   95 (786)
T KOG0588|consen   16 LGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVP   95 (786)
T ss_pred             ccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecC
Confidence            45689999999999998765 99999999976422    125688999999999999999999999987    8999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +|.|++++..++       ++++....+++.||+.|+.|+|..++.|+|.
T Consensus        96 gGELFdylv~kG-------~l~e~eaa~ff~QIi~gv~yCH~~~icHRDL  138 (786)
T KOG0588|consen   96 GGELFDYLVRKG-------PLPEREAAHFFRQILDGVSYCHAFNICHRDL  138 (786)
T ss_pred             CchhHHHHHhhC-------CCCCHHHHHHHHHHHHHHHHHhhhcceeccC
Confidence            999999998864       3788999999999999999999999999985

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.72  E-value=1e-16  Score=115.38  Aligned_cols=115  Identities=19%  Similarity=0.299  Sum_probs=95.2

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc---------ee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG---------LV   99 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---------lv   99 (156)
                      .+.+.||+|+||.||++.... +..+|+|.+.....   ....+.+|+.++..++|+|++++.+++...         ++
T Consensus         3 ~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv   82 (338)
T cd07859           3 KIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVV   82 (338)
T ss_pred             EEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEE
Confidence            345789999999999998765 88999998874321   224688999999999999999998876421         89


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+. ++|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        83 ~e~~~-~~L~~~l~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlk  130 (338)
T cd07859          83 FELME-SDLHQVIKAN-------DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLK  130 (338)
T ss_pred             EecCC-CCHHHHHHhc-------ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            99995 5899988653       347889999999999999999999999999985

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.72  E-value=2.2e-16  Score=109.15  Aligned_cols=114  Identities=24%  Similarity=0.468  Sum_probs=97.4

Q ss_pred             hccccccCceEEEEEeCCCcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCChH
Q 047548           36 DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLH  109 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L~  109 (156)
                      +.||+|+||.||++...++..+++|.+.......  ..+.+|+.++..++|+|++++.+.+...    +++||+++++|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            3689999999999987778889999887543222  4688899999999999999999988776    999999999999


Q ss_pred             HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          110 KFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       110 ~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++...      ...+++..+..++.|++.+|.|+|++++.|+|+.
T Consensus        81 ~~~~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~  120 (250)
T cd05085          81 SFLRKK------KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLA  120 (250)
T ss_pred             HHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccC
Confidence            998654      2336788999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.72  E-value=3e-17  Score=114.19  Aligned_cols=114  Identities=25%  Similarity=0.385  Sum_probs=93.8

Q ss_pred             hccccccCceEEEEEeCC--------CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           36 DKVRQGGYGVVYRGKLHE--------GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~--------~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      +.||+|+||.||++....        ...+++|.+...... .+.+..|+.++..+.|+|++++.+.+...    +++||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            368999999999998643        234677776543222 25678899999999999999999998775    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+|.+++...      ...+++.....++.|++.||.|||+.+++|+||.
T Consensus        81 ~~~g~L~~~l~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlk  127 (258)
T cd05078          81 VKFGSLDTYLKKN------KNLINISWKLEVAKQLAWALHFLEDKGLTHGNVC  127 (258)
T ss_pred             CCCCcHHHHHhcC------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCc
Confidence            9999999999754      2347888899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.72  E-value=1.2e-16  Score=114.63  Aligned_cols=113  Identities=17%  Similarity=0.186  Sum_probs=92.1

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHH-HHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVA-CISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~-~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      ++||+|+||.||++.... +..+|+|++....    .....+..|.. ++..++|+|++++.+.+...    +++||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            368999999999999765 8899999986422    11234555544 57788999999999888766    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|...+...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        81 ~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlk  123 (321)
T cd05603          81 GELFFHLQRE-------RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLK  123 (321)
T ss_pred             CCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCC
Confidence            9999888653       347788888999999999999999999999985

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.72  E-value=2e-17  Score=121.68  Aligned_cols=119  Identities=18%  Similarity=0.260  Sum_probs=105.8

Q ss_pred             hhhhhhhccccccCceEEEEEeC-CCcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLH-EGRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ..+++.+.||+|.|+.|-.+++- .|+.||||++..+..+.   ..++.|+++++.++||||++++.+....    +++|
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE   97 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE   97 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence            34678889999999999888753 38999999999876554   5689999999999999999999998887    8999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +-.+|+|+++|-.+      ...+.+....++++||+.++.|+|..+++|+|+
T Consensus        98 LGD~GDl~DyImKH------e~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDL  144 (864)
T KOG4717|consen   98 LGDGGDLFDYIMKH------EEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDL  144 (864)
T ss_pred             ecCCchHHHHHHhh------hccccHHHHHHHHHHHHHHHHHHhhhhhhcccC
Confidence            99999999999876      556889999999999999999999999999996

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.71  E-value=1.3e-16  Score=116.84  Aligned_cols=130  Identities=24%  Similarity=0.380  Sum_probs=101.5

Q ss_pred             HHHhhhhhhhhccccccCceEEEEEeCC------CcEEEEEecccCCCCh--HHHHHHHHHHcCC-CCCCccccceeeec
Q 047548           26 DVKKMTNSFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGNG--EEFINEVACISGT-SHVNIVTPLGICCE   96 (156)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l-~~~~i~~l~~~~~~   96 (156)
                      .++.....+.+.||+|+||.||++....      ...||+|.+.......  ..+.+|+.++..+ .|+|++++.+.+..
T Consensus        34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~  113 (374)
T cd05106          34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH  113 (374)
T ss_pred             cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence            3444455677899999999999987421      3579999987543222  4678999999999 89999999998877


Q ss_pred             c----eeeecCCCCChHHHhhhcCCC------------------------------------------------------
Q 047548           97 G----LVYEFMSNGSLHKFIYDKGSM------------------------------------------------------  118 (156)
Q Consensus        97 ~----lv~e~~~~g~L~~~l~~~~~~------------------------------------------------------  118 (156)
                      .    +++||+++|+|.+++......                                                      
T Consensus       114 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (374)
T cd05106         114 GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQ  193 (374)
T ss_pred             CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccc
Confidence            6    999999999999998642100                                                      


Q ss_pred             ---------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          119 ---------STKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       119 ---------~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                               ......+++..+..++.|++.||.|||+++++|+|+.
T Consensus       194 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLk  239 (374)
T cd05106         194 SSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVA  239 (374)
T ss_pred             cccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCc
Confidence                     0001236778889999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.71  E-value=8.5e-17  Score=127.62  Aligned_cols=131  Identities=18%  Similarity=0.208  Sum_probs=103.7

Q ss_pred             CChHHHHhhhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc
Q 047548           22 YNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG   97 (156)
Q Consensus        22 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~   97 (156)
                      +...++....+.+.+.||+|+||.||++.... +..+++|.+......   ...+..|+.++..+.|+||+++++.+...
T Consensus         5 ~~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de   84 (1021)
T PTZ00266          5 YDDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK   84 (1021)
T ss_pred             ccCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec
Confidence            33344444455667899999999999999765 778899988753222   25688999999999999999999987542


Q ss_pred             ------eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-------CCCCcccc
Q 047548           98 ------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV-------ATLGLCIS  155 (156)
Q Consensus        98 ------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~-------~~~h~~i~  155 (156)
                            ++|||+++++|.++|......   ...+++..++.++.||+.||.|||+.       +++|+||.
T Consensus        85 ~~~~lyIVMEY~~gGSL~~lL~k~~~~---~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLK  152 (1021)
T PTZ00266         85 ANQKLYILMEFCDAGDLSRNIQKCYKM---FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLK  152 (1021)
T ss_pred             CCCEEEEEEeCCCCCcHHHHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCc
Confidence                  899999999999999753110   24588999999999999999999985       49999984

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.71  E-value=2.7e-16  Score=109.77  Aligned_cols=117  Identities=23%  Similarity=0.341  Sum_probs=99.0

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh-HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG-EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~-~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      ..+.+.||+|+||.||++.... +..+++|.+....... ..+.+|+.++..++|+|++++.+.+...    +++||+++
T Consensus        11 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~   90 (267)
T cd06646          11 YELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGG   90 (267)
T ss_pred             cchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCC
Confidence            4556789999999999999754 7889999887543332 4577899999999999999999888766    89999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++...       ..+++..+..++.|++.||.|||+.+++|+|+.
T Consensus        91 ~~L~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~  133 (267)
T cd06646          91 GSLQDIYHVT-------GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIK  133 (267)
T ss_pred             CcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence            9999988653       347888999999999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.71  E-value=1.7e-16  Score=110.90  Aligned_cols=118  Identities=23%  Similarity=0.417  Sum_probs=98.1

Q ss_pred             hhhhhccccccCceEEEEEeCC----CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ..+.+.||+|+||.||++....    +..+++|.+......  .+.+.+|+.++..++|+|++++.+.+...    +++|
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (267)
T cd05066           6 IKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTE   85 (267)
T ss_pred             eEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEE
Confidence            3456789999999999998642    347889988654322  25688999999999999999999988765    8999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++++|.+++...      ...++...+..++.|++.|+.|||+++++|+|+.
T Consensus        86 ~~~~~~L~~~~~~~------~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk  133 (267)
T cd05066          86 YMENGSLDAFLRKH------DGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA  133 (267)
T ss_pred             cCCCCCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhc
Confidence            99999999999754      2347888899999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.71  E-value=3.2e-16  Score=109.58  Aligned_cols=119  Identities=29%  Similarity=0.408  Sum_probs=99.9

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCC-CCCCccccceeeec-------c---ee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGT-SHVNIVTPLGICCE-------G---LV   99 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~-------~---lv   99 (156)
                      ..+.+.||+|+||.||++.... +..+++|.+.........+..|+.++..+ +|+|++++.+.+..       .   ++
T Consensus         8 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv   87 (272)
T cd06637           8 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLV   87 (272)
T ss_pred             hhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEE
Confidence            3455689999999999998765 88999999876544556788899999888 79999999988763       1   89


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++++|.+++....     ...+++..+..++.|++.||+|||+++++|.|+.
T Consensus        88 ~e~~~~~~L~~~l~~~~-----~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~  138 (272)
T cd06637          88 MEFCGAGSVTDLIKNTK-----GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIK  138 (272)
T ss_pred             EEcCCCCcHHHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Confidence            99999999999987642     3457888899999999999999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.71  E-value=1.4e-16  Score=114.34  Aligned_cols=112  Identities=22%  Similarity=0.256  Sum_probs=93.9

Q ss_pred             ccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCCCC
Q 047548           37 KVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      .||+|+||.||++..+. +..+|+|.+....    .....+..|..++..+ .|+|++++.+.+...    ++|||+++|
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g   81 (320)
T cd05590           2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG   81 (320)
T ss_pred             eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence            68999999999999765 7899999987431    1224567788888766 799999999888776    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        82 ~L~~~i~~~-------~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlk  123 (320)
T cd05590          82 DLMFHIQKS-------RRFDEARARFYAAEITSALMFLHDKGIIYRDLK  123 (320)
T ss_pred             hHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCC
Confidence            999988753       347888999999999999999999999999984

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.71  E-value=2.5e-16  Score=109.20  Aligned_cols=117  Identities=26%  Similarity=0.505  Sum_probs=100.4

Q ss_pred             hhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCCh
Q 047548           33 SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSL  108 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L  108 (156)
                      .+.+.+|+|+||.||++.+..+..+++|.+.........+.+|+.+++.+.|++++++++.+...    +++||+++++|
T Consensus         7 ~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L   86 (256)
T cd05112           7 TLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCL   86 (256)
T ss_pred             EEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcH
Confidence            45578999999999999876677899998876554556788999999999999999999887665    99999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+++...      ...+++..+..++.|++.++.|||+.++.|.|+.
T Consensus        87 ~~~~~~~------~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~  127 (256)
T cd05112          87 SDYLRAQ------RGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLA  127 (256)
T ss_pred             HHHHHhC------ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccc
Confidence            9998754      2336788899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.71  E-value=2e-16  Score=111.15  Aligned_cols=117  Identities=26%  Similarity=0.457  Sum_probs=96.8

Q ss_pred             hhhhccccccCceEEEEEeCC-Cc----EEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc---eeeec
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GR----VAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG---LVYEF  102 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~----~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~  102 (156)
                      .+.+.||+|+||.||++.+.. +.    .||+|.+......  ...+.+|+.++..+.|+|++.+.+.+...   ++++|
T Consensus        10 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~~~~   89 (279)
T cd05109          10 KKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLVTQL   89 (279)
T ss_pred             eeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEEEEc
Confidence            345689999999999998643 33    4789988653222  25688899999999999999999888766   89999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+|.+++...      ...+++.....++.|++.||.|||+++++|+||.
T Consensus        90 ~~~g~l~~~l~~~------~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlk  136 (279)
T cd05109          90 MPYGCLLDYVREN------KDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLA  136 (279)
T ss_pred             CCCCCHHHHHhhc------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence            9999999998753      2347889999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.71  E-value=2.5e-16  Score=109.49  Aligned_cols=112  Identities=24%  Similarity=0.430  Sum_probs=95.1

Q ss_pred             ccccccCceEEEEEeC---CCcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc---eeeecCCCCC
Q 047548           37 KVRQGGYGVVYRGKLH---EGRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG---LVYEFMSNGS  107 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~---~~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~~~~g~  107 (156)
                      .||+|+||.||++.++   .+..+++|.+.....+.   +.+..|+.++..+.|+|++++.+.+...   +++||+++++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~   81 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP   81 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence            5899999999999753   36789999987543322   5688899999999999999999887655   8999999999


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |.+++...       ..+++.....++.|++.||.|||++++.|+||.
T Consensus        82 L~~~l~~~-------~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlk  122 (257)
T cd05116          82 LNKFLQKN-------KHVTEKNITELVHQVSMGMKYLEETNFVHRDLA  122 (257)
T ss_pred             HHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccc
Confidence            99998653       347889999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.71  E-value=1.3e-16  Score=114.50  Aligned_cols=113  Identities=17%  Similarity=0.215  Sum_probs=92.3

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHH-HHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVA-CISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~-~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.||+|+||.||++.... +..+|+|.+....    .....+..|.. ++..++|+|++++.+.+...    +++||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            368999999999999765 8899999986432    11234455544 56778999999999887765    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+|..++...       ..+++.....++.|++.||.|||+++++|+||.
T Consensus        81 g~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~givH~dik  123 (323)
T cd05575          81 GELFFHLQRE-------RSFPEPRARFYAAEIASALGYLHSLNIIYRDLK  123 (323)
T ss_pred             CCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCC
Confidence            9999988653       347788889999999999999999999999985

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.71  E-value=8.7e-17  Score=116.77  Aligned_cols=113  Identities=23%  Similarity=0.270  Sum_probs=93.7

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCC---------------CChHHHHHHHHHHcCCCCCCccccceeeecc
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM---------------GNGEEFINEVACISGTSHVNIVTPLGICCEG   97 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~---------------~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~   97 (156)
                      +...||+|.||.|-++.... +..+|+|++....               ...+.+.+|+.+++.++|+|+++|+.+..++
T Consensus       101 l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP  180 (576)
T KOG0585|consen  101 LIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDP  180 (576)
T ss_pred             hhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCc
Confidence            34679999999999998654 8999999997421               1114688999999999999999999998876


Q ss_pred             ------eeeecCCCCChHHHhhhcCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548           98 ------LVYEFMSNGSLHKFIYDKGSMSTKNNR-LEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus        98 ------lv~e~~~~g~L~~~l~~~~~~~~~~~~-~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                            +|+||+..|.+...-.        ... +...+..+++.++..||.|||.++++|+||
T Consensus       181 ~s~~~YlVley~s~G~v~w~p~--------d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDI  236 (576)
T KOG0585|consen  181 ESDKLYLVLEYCSKGEVKWCPP--------DKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDI  236 (576)
T ss_pred             ccCceEEEEEeccCCccccCCC--------CcccccHHHHHHHHHHHHHHHHHHHhcCeecccc
Confidence                  9999999887643211        233 778999999999999999999999999998

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.71  E-value=1.9e-16  Score=109.88  Aligned_cols=118  Identities=24%  Similarity=0.438  Sum_probs=101.6

Q ss_pred             hhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGS  107 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~  107 (156)
                      ..+.+.+|.|+||.||++... +..+++|.+.......+.+.+|+.++..+.|+|++++.+.+...    +++||+++++
T Consensus         8 ~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~   86 (256)
T cd05039           8 LKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGS   86 (256)
T ss_pred             ccceeeeecCCCceEEEEEec-CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCc
Confidence            345678999999999999865 77899999876544456789999999999999999999988755    9999999999


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |.+++....     ...+++..+..++.|++.|+.|||++++.|+||.
T Consensus        87 L~~~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~  129 (256)
T cd05039          87 LVDYLRSRG-----RAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLA  129 (256)
T ss_pred             HHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcc
Confidence            999997642     2357899999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.71  E-value=2.5e-16  Score=110.04  Aligned_cols=117  Identities=26%  Similarity=0.357  Sum_probs=93.2

Q ss_pred             ccccccCceEEEEEeCC---CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCC
Q 047548           37 KVRQGGYGVVYRGKLHE---GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGS  107 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~---~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~  107 (156)
                      .||+|+||.||+|....   ...+++|.+.......  ..+.+|+..++.++|+|++++.+.+...    +++||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            58999999999997533   4567888776433222  4578899999999999999999988766    9999999999


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |.+++......  .....++.....++.|++.|+.|||+++++|+||.
T Consensus        82 L~~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlk  127 (269)
T cd05042          82 LKNYLRSNRGM--VAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLA  127 (269)
T ss_pred             HHHHHHhcccc--ccccccHHHHHHHHHHHHHHHHHHHhcCEeccccc
Confidence            99999764311  01224567788999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.71  E-value=1.5e-16  Score=111.87  Aligned_cols=113  Identities=20%  Similarity=0.250  Sum_probs=94.1

Q ss_pred             cccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCCh
Q 047548           38 VRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSL  108 (156)
Q Consensus        38 lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L  108 (156)
                      ||+|+||.||++..+. +..+++|.+.....    .......|+.++..++|+|++++.+.+...    +++||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            6999999999998765 88999998864221    123456789999999999999999888766    99999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+++....     ....++..+..++.|++.||.|||+.+++|+||.
T Consensus        81 ~~~~~~~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dik  122 (277)
T cd05607          81 KYHIYNVG-----ERGLEMERVIHYSAQITCGILHLHSMDIVYRDMK  122 (277)
T ss_pred             HHHHHhcc-----ccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCC
Confidence            98886532     3347788889999999999999999999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.71  E-value=1.7e-16  Score=113.65  Aligned_cols=113  Identities=20%  Similarity=0.232  Sum_probs=93.7

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcC-CCCCCccccceeeecc----eeeecCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISG-TSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~-l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.||+|+||.||++.... +..+|+|.+....    ........|..++.. ..|++++++.+.+...    ++|||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            368999999999999865 8899999987532    122456667777765 4899999999888776    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|..++...       ..++......++.|++.||.|||+++++|+||.
T Consensus        81 g~L~~~i~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlk  123 (316)
T cd05620          81 GDLMFHIQDK-------GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLK  123 (316)
T ss_pred             CcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCC
Confidence            9999988753       337788899999999999999999999999985

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.71  E-value=1.9e-16  Score=113.74  Aligned_cols=113  Identities=18%  Similarity=0.217  Sum_probs=92.1

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHH-HHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVA-CISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~-~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.||+|+||.||++.... +..+|+|++....    .....+..|.. ++..++|+|++++.+.+...    +++||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            368999999999998765 8899999986431    11234455544 56778999999999888766    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|...+...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        81 ~~L~~~l~~~-------~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlk  123 (325)
T cd05604          81 GELFFHLQRE-------RSFPEPRARFYAAEIASALGYLHSINIVYRDLK  123 (325)
T ss_pred             CCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence            9999888653       347889999999999999999999999999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.71  E-value=1.5e-16  Score=115.90  Aligned_cols=117  Identities=23%  Similarity=0.301  Sum_probs=103.6

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCC-CCCccccceeeecc----ee
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTS-HVNIVTPLGICCEG----LV   99 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~l~~~~~~~----lv   99 (156)
                      ..+.+.+.||.|.||.||.+..+. |..+|+|.+.....    +...+.+|+.++..+. |+|++.+.+.+...    ++
T Consensus        35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv  114 (382)
T KOG0032|consen   35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV  114 (382)
T ss_pred             ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence            345666899999999999999877 99999999976332    2357999999999997 99999999999987    99


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      ||++.||+|.+.+...        .+++.....++.|++.++.|||+.+++|+|+
T Consensus       115 mEL~~GGeLfd~i~~~--------~~sE~da~~~~~~il~av~~lH~~gvvHrDl  161 (382)
T KOG0032|consen  115 MELCEGGELFDRIVKK--------HYSERDAAGIIRQILEAVKYLHSLGVVHRDL  161 (382)
T ss_pred             EEecCCchHHHHHHHc--------cCCHHHHHHHHHHHHHHHHHHHhCCceeccC
Confidence            9999999999999753        2889999999999999999999999999997

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=2.6e-17  Score=122.63  Aligned_cols=113  Identities=22%  Similarity=0.295  Sum_probs=97.9

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      +.||.|+||-||-+.... .+.||+|.+.-+.+    .++++..|+..|..+.|||.+.+.|++...    +|||||-| 
T Consensus        32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYClG-  110 (948)
T KOG0577|consen   32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCLG-  110 (948)
T ss_pred             HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHhc-
Confidence            468999999999998654 78899988764333    236799999999999999999999999887    99999954 


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +..+++...      .+++.+-.+.-++.+.+.||+|||+.+.+|+||-
T Consensus       111 SAsDlleVh------kKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiK  153 (948)
T KOG0577|consen  111 SASDLLEVH------KKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIK  153 (948)
T ss_pred             cHHHHHHHH------hccchHHHHHHHHHHHHHHHHHHHHhhHHhhhcc
Confidence            888888776      4568899999999999999999999999999984

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.71  E-value=8.2e-17  Score=119.59  Aligned_cols=116  Identities=18%  Similarity=0.265  Sum_probs=102.2

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      +.+...||+|.|+.|..+.... +..||+|.+..+..+.   +.+.+|++++..+.||||++++++....    +|+||+
T Consensus        58 y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya  137 (596)
T KOG0586|consen   58 YVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYA  137 (596)
T ss_pred             eeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEec
Confidence            3456789999999999999765 8899999999876554   4589999999999999999999999877    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      .+|.+++++...+       .+.+.....++.|+..+++|||+++++|+|+
T Consensus       138 ~~ge~~~yl~~~g-------r~~e~~ar~~F~q~vsaveYcH~k~ivHrdL  181 (596)
T KOG0586|consen  138 SGGELFDYLVKHG-------RMKEKEARAKFRQIVSAVEYCHSKNIVHRDL  181 (596)
T ss_pred             cCchhHHHHHhcc-------cchhhhhhhhhHHHHHHHHHHhhcceecccc
Confidence            9999999998753       2556788889999999999999999999986

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.71  E-value=1.7e-16  Score=113.68  Aligned_cols=113  Identities=19%  Similarity=0.219  Sum_probs=94.8

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.||+|+||.||++.... +..+|+|.+....    .....+..|..++..+ .|+|++++.+.+...    +++||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            368999999999998765 7899999987532    1224567788888777 799999999987766    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|...+...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        81 ~~L~~~~~~~-------~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlk  123 (318)
T cd05570          81 GDLMFHIQRS-------GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLK  123 (318)
T ss_pred             CCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCC
Confidence            9999888653       347889999999999999999999999999984

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.71  E-value=3.1e-16  Score=110.77  Aligned_cols=129  Identities=23%  Similarity=0.397  Sum_probs=100.0

Q ss_pred             HHhhhhhhhhccccccCceEEEEEeCC------CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc-
Q 047548           27 VKKMTNSFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG-   97 (156)
Q Consensus        27 ~~~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~-   97 (156)
                      +......+.+.||+|+||.||+|..++      +..+++|.+.......  ..+.+|+.++..++|++++++.+.+... 
T Consensus         3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   82 (288)
T cd05061           3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ   82 (288)
T ss_pred             ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            344555677899999999999986432      4578999876543222  3577899999999999999999987766 


Q ss_pred             ---eeeecCCCCChHHHhhhcCCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 ---LVYEFMSNGSLHKFIYDKGSMST---KNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 ---lv~e~~~~g~L~~~l~~~~~~~~---~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                         +++||+++|+|.+++........   .....+...+..++.|++.||.|||++++.|+||.
T Consensus        83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dik  146 (288)
T cd05061          83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLA  146 (288)
T ss_pred             CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCC
Confidence               99999999999999975321111   01234567888999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.71  E-value=1.4e-16  Score=114.75  Aligned_cols=117  Identities=17%  Similarity=0.185  Sum_probs=97.7

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.+.||+|+||.||++.... +..+|+|.+....    .....+..|..++..++|++++.+.+.+...    +++||+
T Consensus         4 ~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~   83 (332)
T cd05623           4 EILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYY   83 (332)
T ss_pred             eEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEecc
Confidence            345789999999999999766 7889999986421    1123477888899999999999999888776    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|+|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        84 ~~g~L~~~l~~~------~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlk  129 (332)
T cd05623          84 VGGDLLTLLSKF------EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIK  129 (332)
T ss_pred             CCCcHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCC
Confidence            999999999763      2347888889999999999999999999999984

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.70  E-value=2.1e-16  Score=110.48  Aligned_cols=118  Identities=24%  Similarity=0.467  Sum_probs=98.8

Q ss_pred             hhhhhccccccCceEEEEEeCC-C---cEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-G---RVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~---~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ..+.+.+|+|+||.||++.... +   ..+++|.+......  .+.+..|+.++..+.|+|++++.+.+...    +++|
T Consensus         6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   85 (269)
T cd05065           6 VKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITE   85 (269)
T ss_pred             eEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEe
Confidence            3466789999999999998654 3   36899998754222  25788999999999999999999988776    8999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++++|.+++...      ...++...+..++.|++.|+.|||+++++|+|+.
T Consensus        86 ~~~~~~L~~~l~~~------~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~  133 (269)
T cd05065          86 FMENGALDSFLRQN------DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLA  133 (269)
T ss_pred             cCCCCcHHHHHhhC------CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccC
Confidence            99999999998754      2347888999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.70  E-value=8.1e-17  Score=112.58  Aligned_cols=114  Identities=22%  Similarity=0.333  Sum_probs=97.1

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc------eeeecCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG------LVYEFMSN  105 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv~e~~~~  105 (156)
                      ..|++|+||.||+++.+. ++.||+|.++-.....   =...+|+.+|..++|+||+.+..++...      +||||++.
T Consensus        82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh  161 (419)
T KOG0663|consen   82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH  161 (419)
T ss_pred             hhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh
Confidence            579999999999999765 8899999998643221   2468999999999999999998887765      99999977


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccC
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIST  156 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~~  156 (156)
                       +|..++...      ..++.......++.|++.|+.|||.+-++|+|+-|
T Consensus       162 -DLksl~d~m------~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~  205 (419)
T KOG0663|consen  162 -DLKSLMETM------KQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKT  205 (419)
T ss_pred             -hHHHHHHhc------cCCCchHHHHHHHHHHHHHHHHHhhceeEecccch
Confidence             999999876      34578888899999999999999999999999743

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.70  E-value=2.9e-16  Score=110.64  Aligned_cols=117  Identities=24%  Similarity=0.399  Sum_probs=97.4

Q ss_pred             hhhhccccccCceEEEEEeC-----CCcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc------ee
Q 047548           33 SFSDKVRQGGYGVVYRGKLH-----EGRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG------LV   99 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~-----~~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv   99 (156)
                      .+.+.||+|+||.||.+.+.     .+..+++|.+......  ...+.+|+.+++.+.|+|++++.+.+...      ++
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (284)
T cd05079           7 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLI   86 (284)
T ss_pred             hhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEE
Confidence            44568999999999999742     2778999998754322  25688999999999999999998877653      89


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++++|.+++...      ...+++..+..++.|++.||.|||++++.|+|+.
T Consensus        87 ~e~~~g~~L~~~l~~~------~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlk  136 (284)
T cd05079          87 MEFLPSGSLKEYLPRN------KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLA  136 (284)
T ss_pred             EEccCCCCHHHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence            9999999999998653      2347888999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.70  E-value=2.1e-16  Score=111.47  Aligned_cols=116  Identities=18%  Similarity=0.209  Sum_probs=95.3

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .+.+.||+|+||.||++..+. +..+|+|.+.....   ..+.+.+|+.++..++|+|++++.+.+...    +++||++
T Consensus         4 ~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   83 (287)
T cd07848           4 EVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVE   83 (287)
T ss_pred             eEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCC
Confidence            455689999999999999865 78899998875322   225678899999999999999999888765    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++.+..+...       ...+++..+..++.|++.||.|||+.+++|+||.
T Consensus        84 ~~~l~~~~~~-------~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlk  127 (287)
T cd07848          84 KNMLELLEEM-------PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIK  127 (287)
T ss_pred             CCHHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            8766544332       2347888899999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.70  E-value=7.7e-17  Score=116.14  Aligned_cols=112  Identities=22%  Similarity=0.378  Sum_probs=93.9

Q ss_pred             hhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCC--CCCCccccceeeecc--------eeeec
Q 047548           33 SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGT--SHVNIVTPLGICCEG--------LVYEF  102 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l--~~~~i~~l~~~~~~~--------lv~e~  102 (156)
                      .+.+.+|+|.||.||+|.|+ |+.||||++...  +...+.+|.+++..+  +|+||..+++.-...        ++.+|
T Consensus       214 ~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr--dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdY  290 (513)
T KOG2052|consen  214 VLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR--DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDY  290 (513)
T ss_pred             EEEEEecCccccceeecccc-CCceEEEEeccc--chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeec
Confidence            45678999999999999997 778999998643  567889999999874  999999998765443        99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc--------CCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV--------ATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~--------~~~h~~i~  155 (156)
                      .+.|+|+++|..        ..++....++++..++.||++||..        .+.|+|+-
T Consensus       291 He~GSL~DyL~r--------~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlK  343 (513)
T KOG2052|consen  291 HEHGSLYDYLNR--------NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLK  343 (513)
T ss_pred             ccCCcHHHHHhh--------ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccc
Confidence            999999999985        3488899999999999999999963        35566653

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.70  E-value=2.8e-16  Score=109.62  Aligned_cols=115  Identities=20%  Similarity=0.326  Sum_probs=97.8

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC-------ChHHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-------NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ..+.||+|++|.||.+.... +..+++|.+.....       ..+.+.+|+.+++.++|+|++++.+.+...    +++|
T Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e   83 (268)
T cd06630           4 KGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVE   83 (268)
T ss_pred             ccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEe
Confidence            34679999999999998644 88999998874321       124688999999999999999999998776    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++++|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        84 ~~~~~~L~~~l~~~-------~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~  130 (268)
T cd06630          84 WMAGGSVSHLLSKY-------GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVK  130 (268)
T ss_pred             ccCCCcHHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            99999999998753       347788999999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.70  E-value=2e-16  Score=113.81  Aligned_cols=112  Identities=16%  Similarity=0.158  Sum_probs=94.5

Q ss_pred             ccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCCCC
Q 047548           37 KVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      .||+|+||.||++.... +..+|+|++.....    ..+.+..|..++..+ +|++++.+.+.+...    +++||++++
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   81 (327)
T cd05617           2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG   81 (327)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence            68999999999998765 78899999875321    124577888888877 699999999888765    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|...+...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        82 ~L~~~~~~~-------~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlk  123 (327)
T cd05617          82 DLMFHMQRQ-------RKLPEEHARFYAAEICIALNFLHERGIIYRDLK  123 (327)
T ss_pred             cHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence            999888653       348899999999999999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.70  E-value=2.5e-17  Score=122.61  Aligned_cols=115  Identities=19%  Similarity=0.321  Sum_probs=94.4

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEE---EEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc------eee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAA---VKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG------LVY  100 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a---~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv~  100 (156)
                      .|.++||+|+|.+||+|.... |..||   +|.-.....  ..+.+..|+.+|+.|+|+||++++..+.+.      ++.
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT  122 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT  122 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence            466799999999999998754 66665   232222222  337899999999999999999999988876      899


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc--CCCCccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV--ATLGLCI  154 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~--~~~h~~i  154 (156)
                      |++..|+|..++++.       +.+....+..+|+||++||.|||++  .++|+|+
T Consensus       123 EL~TSGtLr~Y~kk~-------~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDL  171 (632)
T KOG0584|consen  123 ELFTSGTLREYRKKH-------RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDL  171 (632)
T ss_pred             ecccCCcHHHHHHHh-------ccCCHHHHHHHHHHHHHHhhhhhcCCCCcccccc
Confidence            999999999999885       3478889999999999999999998  5667775

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.70  E-value=3.9e-16  Score=108.93  Aligned_cols=118  Identities=23%  Similarity=0.320  Sum_probs=99.8

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      ...+.+.||+|+||.||.+.... +..+++|.+...... ...+.+|+.++..++|+|++++.+.+...    +++||++
T Consensus        10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~   89 (267)
T cd06645          10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCG   89 (267)
T ss_pred             HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccC
Confidence            34566789999999999998754 889999988754322 24577899999999999999999988766    8999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++...       ..+++.....++.|++.|+.|||+.+++|.|+.
T Consensus        90 ~~~L~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk  133 (267)
T cd06645          90 GGSLQDIYHVT-------GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIK  133 (267)
T ss_pred             CCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            99999998653       347889999999999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.70  E-value=3.5e-16  Score=109.96  Aligned_cols=117  Identities=24%  Similarity=0.424  Sum_probs=97.9

Q ss_pred             hhhhccccccCceEEEEEeCC-C----cEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc---eeeec
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-G----RVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG---LVYEF  102 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~----~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~  102 (156)
                      .+.+.||+|+||.||++.... +    ..+++|.+......  ...+.+|+..+..+.|+|++++.+.+...   +++||
T Consensus        10 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~   89 (279)
T cd05057          10 EKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLITQL   89 (279)
T ss_pred             EEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEEEec
Confidence            455789999999999998643 2    25788887654322  25688899999999999999999988766   99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        90 ~~~g~L~~~l~~~------~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~  136 (279)
T cd05057          90 MPLGCLLDYVRNH------KDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLA  136 (279)
T ss_pred             CCCCcHHHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccC
Confidence            9999999999764      2347889999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.70  E-value=4.1e-16  Score=109.70  Aligned_cols=116  Identities=23%  Similarity=0.336  Sum_probs=94.4

Q ss_pred             hhhccccccCceEEEEEeCC-Cc----EEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc---eeeecC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GR----VAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG---LVYEFM  103 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~----~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~~  103 (156)
                      +.+.||+|+||.||++.+.. +.    .+++|.+.....  ....+..++..+..+.|+|++++.+.+...   +++|++
T Consensus        11 ~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i~e~~   90 (279)
T cd05111          11 KLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLVTQLS   90 (279)
T ss_pred             eccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEEEEeC
Confidence            34689999999999998743 33    477777754322  124567788888999999999999987655   899999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|+|.+++...      ...+++..+..++.|++.||.|||++++.|+||.
T Consensus        91 ~~gsL~~~l~~~------~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlk  136 (279)
T cd05111          91 PLGSLLDHVRQH------RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLA  136 (279)
T ss_pred             CCCcHHHHHHhc------ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccC
Confidence            999999999764      3347889999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.70  E-value=3.4e-16  Score=109.15  Aligned_cols=120  Identities=18%  Similarity=0.234  Sum_probs=98.2

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC-C---hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-N---GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.+.||+|+||.||++.... +..+++|.+..... +   ...+.+|+.+++.++|+|++++.+.+...    +++||+
T Consensus         5 ~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   84 (267)
T cd08228           5 QIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELA   84 (267)
T ss_pred             eeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEec
Confidence            456789999999999998754 88999998754221 1   14578899999999999999999887765    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++.....   ....++...+..++.|++.||.|||++++.|.|+.
T Consensus        85 ~~~~L~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~  133 (267)
T cd08228          85 DAGDLSQMIKYFKK---QKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIK  133 (267)
T ss_pred             CCCcHHHHHHHhhh---ccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCC
Confidence            99999998864211   03447788899999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.70  E-value=3.5e-16  Score=109.95  Aligned_cols=126  Identities=22%  Similarity=0.362  Sum_probs=100.5

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-----CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc-----
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-----GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG-----   97 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----   97 (156)
                      ....+.++||+|+||.||+|....     +..+++|.+......  ...+.+|+.++..++|+|++++.+.+...     
T Consensus         6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~   85 (280)
T cd05043           6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPF   85 (280)
T ss_pred             hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCE
Confidence            344566889999999999998754     678888988654322  25688899999999999999999987663     


Q ss_pred             eeeecCCCCChHHHhhhcCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMS-TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|+++++|.+++....... .....+++..++.++.|++.||.|||+++++|+||.
T Consensus        86 ~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~  144 (280)
T cd05043          86 VLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIA  144 (280)
T ss_pred             EEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccC
Confidence            8889999999999987532100 011457889999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.70  E-value=4e-16  Score=109.50  Aligned_cols=126  Identities=29%  Similarity=0.496  Sum_probs=102.1

Q ss_pred             hhhhhhhccccccCceEEEEEeCC------CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----   97 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----   97 (156)
                      ....+.+.+|+|+||.||++....      +..+++|.+......  .+.+.+|+.++..+.|+|++++.+.+...    
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            345567889999999999997532      468999998764433  25788999999999999999999988876    


Q ss_pred             eeeecCCCCChHHHhhhcCCC-------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSM-------STKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~-------~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++||+++++|.+++...+..       ......+++..+..++.|++.|+.|||+++++|+||.
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlk  149 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLA  149 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccc
Confidence            999999999999999754210       0112346788899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.70  E-value=3e-16  Score=111.88  Aligned_cols=116  Identities=22%  Similarity=0.328  Sum_probs=96.4

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      .+.+.||+|+||.||++.... +..+|+|.+......  ...+.+|+.++..++|+|++++.+.+...    +++||+++
T Consensus         9 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   88 (309)
T cd07872           9 IKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK   88 (309)
T ss_pred             EEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC
Confidence            345689999999999998765 788999988753322  24577899999999999999999988766    99999975


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       ++.+++...      ...++...+..++.|++.||.|||+++++|+||.
T Consensus        89 -~l~~~~~~~------~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlk  131 (309)
T cd07872          89 -DLKQYMDDC------GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLK  131 (309)
T ss_pred             -CHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence             888887654      2346788889999999999999999999999985

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.70  E-value=3.2e-16  Score=109.79  Aligned_cols=123  Identities=23%  Similarity=0.351  Sum_probs=98.9

Q ss_pred             hhhhccccccCceEEEEEeCC------CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVY  100 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~  100 (156)
                      .....+|+|+||.||.+..+.      ...+++|.+......  .+.+.+|+.++..++|+|++++.+.+...    +++
T Consensus         8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   87 (275)
T cd05046           8 QEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMIL   87 (275)
T ss_pred             eeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEE
Confidence            345689999999999998642      457888888654333  25688999999999999999999988765    999


Q ss_pred             ecCCCCChHHHhhhcCCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMS--TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~--~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++++|.+++.......  .....+++..+..++.|++.||.|||++++.|.||.
T Consensus        88 e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlk  144 (275)
T cd05046          88 EYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLA  144 (275)
T ss_pred             EecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCc
Confidence            9999999999997543100  001147899999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.70  E-value=2.5e-16  Score=113.14  Aligned_cols=114  Identities=18%  Similarity=0.194  Sum_probs=93.5

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHH---cCCCCCCccccceeeecc----eeee
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACI---SGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l---~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      +.+.||+|+||.||++.... +..+|+|.+....    ...+.+..|..++   ..++|+|++++.+.+...    +++|
T Consensus         3 i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E   82 (324)
T cd05589           3 CLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVME   82 (324)
T ss_pred             EEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEc
Confidence            45689999999999998765 8899999987532    1224566665554   567899999999988776    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++++|...+..        ..+++.....++.|++.||.|||+++++|+||.
T Consensus        83 ~~~~~~L~~~~~~--------~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlk  128 (324)
T cd05589          83 YAAGGDLMMHIHT--------DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLK  128 (324)
T ss_pred             CCCCCcHHHHhhc--------CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCC
Confidence            9999999888753        237889999999999999999999999999985

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.70  E-value=3.2e-16  Score=111.77  Aligned_cols=115  Identities=22%  Similarity=0.278  Sum_probs=97.1

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      +.+.||+|+||.||++.... +..+++|.+.......  ..+.+|+.++..++|+|++++.+.+...    +++||++++
T Consensus         5 ~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~   84 (308)
T cd06615           5 KLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG   84 (308)
T ss_pred             EEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCC
Confidence            45689999999999998765 7788888876532222  4588999999999999999999988776    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA-VATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~-~~~~h~~i~  155 (156)
                      +|.+++...       ..++......++.|++.||.|||+ .+++|+|+.
T Consensus        85 ~L~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~  127 (308)
T cd06615          85 SLDQVLKKA-------GRIPENILGKISIAVLRGLTYLREKHKIMHRDVK  127 (308)
T ss_pred             cHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCC
Confidence            999999753       337788899999999999999998 479999875

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.70  E-value=3.1e-16  Score=109.63  Aligned_cols=118  Identities=21%  Similarity=0.303  Sum_probs=98.3

Q ss_pred             hhhhhccccccCceEEEEEeCC----CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc---eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG---LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~  102 (156)
                      ..+.+.||+|+||.||++....    ...+++|.......  ..+.+.+|+.++..+.|+|++++.+.+...   +++||
T Consensus         8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~e~   87 (270)
T cd05056           8 ITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVMEL   87 (270)
T ss_pred             ceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEEEc
Confidence            4456789999999999998643    34678888765432  225688999999999999999999988766   99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++...      ...+++..+..++.|++.||.|||+.+++|+|+.
T Consensus        88 ~~~~~L~~~l~~~------~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~  134 (270)
T cd05056          88 APLGELRSYLQVN------KYSLDLASLILYSYQLSTALAYLESKRFVHRDIA  134 (270)
T ss_pred             CCCCcHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccC
Confidence            9999999999764      2347889999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>PHA02988 hypothetical protein; Provisional

Probab=99.70  E-value=3.3e-16  Score=110.55  Aligned_cols=112  Identities=14%  Similarity=0.262  Sum_probs=95.0

Q ss_pred             hccccccCceEEEEEeCCCcEEEEEecccCCCCh----HHHHHHHHHHcCCCCCCccccceeeec----c----eeeecC
Q 047548           36 DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG----EEFINEVACISGTSHVNIVTPLGICCE----G----LVYEFM  103 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~----~~~~~e~~~l~~l~~~~i~~l~~~~~~----~----lv~e~~  103 (156)
                      ..+++|+++.||+|.+ .+..||+|.+.......    +.+.+|+.++..++|+|++++.+.+..    .    +++||+
T Consensus        26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~  104 (283)
T PHA02988         26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC  104 (283)
T ss_pred             eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence            3689999999999988 47789999987643332    457799999999999999999998766    1    899999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV-ATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~-~~~h~~i~  155 (156)
                      ++|+|.+++...       ..+++.....++.|++.||.|||+. +++|+|+.
T Consensus       105 ~~g~L~~~l~~~-------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlk  150 (283)
T PHA02988        105 TRGYLREVLDKE-------KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLT  150 (283)
T ss_pred             CCCcHHHHHhhC-------CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCC
Confidence            999999999753       3467888899999999999999985 88999974

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.69  E-value=7.3e-16  Score=107.78  Aligned_cols=122  Identities=23%  Similarity=0.464  Sum_probs=95.9

Q ss_pred             hhhhccccccCceEEEEEeCC-C--cEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeec---------c
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-G--RVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCE---------G   97 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~--~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~---------~   97 (156)
                      .+.+.||+|+||.||++.... +  ..+|+|.+......   .+.+..|..++..++|+|++++.+.+..         .
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            356789999999999998755 3  36889988754222   2568889999999999999999887632         1


Q ss_pred             -eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 -LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 -lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       +++||+++|+|.+++..... ......+++.....++.|++.||.|||+++++|+|+.
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk  139 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRL-GDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLA  139 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcc-cCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence             89999999999998753221 0113347888999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.69  E-value=3.6e-17  Score=121.40  Aligned_cols=117  Identities=22%  Similarity=0.338  Sum_probs=96.1

Q ss_pred             HHHHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eee
Q 047548           25 SDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVY  100 (156)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~  100 (156)
                      |+++...-.-.+.||+|+-|-||.|.+. +++||||..+...      ..+|.-|+.++|+||+.+.|+|...    ++|
T Consensus       119 WeiPFe~IsELeWlGSGaQGAVF~Grl~-netVAVKKV~elk------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiM  191 (904)
T KOG4721|consen  119 WEIPFEEISELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIM  191 (904)
T ss_pred             ccCCHHHhhhhhhhccCcccceeeeecc-CceehhHHHhhhh------hhhHHHHHhccCcceeeEeeeecCCceeEEee
Confidence            3443333233457999999999999886 6789988654321      3456778999999999999999887    999


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||++.|-|+..|+.       .+.++...+..+..+||.||.|||.+-++|+|+-
T Consensus       192 EfCa~GqL~~VLka-------~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLK  239 (904)
T KOG4721|consen  192 EFCAQGQLYEVLKA-------GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLK  239 (904)
T ss_pred             eccccccHHHHHhc-------cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccC
Confidence            99999999999986       3458889999999999999999999999999974

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.69  E-value=2.8e-16  Score=112.88  Aligned_cols=116  Identities=15%  Similarity=0.141  Sum_probs=94.3

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCC-CCCccccceeeecc----eeeec
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTS-HVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~-~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ++.+.||+|+||.||++.... +..+|+|++....    ...+.+..|..++..+. |++++.+.+.+...    +++||
T Consensus         3 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey   82 (323)
T cd05615           3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEY   82 (323)
T ss_pred             eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcC
Confidence            345689999999999998765 8899999987521    12245677888888775 56777788777665    89999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        83 ~~~g~L~~~i~~~-------~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDik  128 (323)
T cd05615          83 VNGGDLMYHIQQV-------GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLK  128 (323)
T ss_pred             CCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence            9999999998753       347889999999999999999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.69  E-value=4.7e-16  Score=108.03  Aligned_cols=113  Identities=25%  Similarity=0.384  Sum_probs=96.3

Q ss_pred             hccccccCceEEEEEeCC----CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc---eeeecCCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG---LVYEFMSNG  106 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~~~~g  106 (156)
                      +.||+|+||.||+|.+..    ...+++|.+.....  ..+.+..|+.++..+.|+|++++.+.+...   +++||++++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG   80 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence            368999999999997643    26899999876543  235688999999999999999999887655   999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++...       ..+++..+..++.|++.||.|||+.++.|.||.
T Consensus        81 ~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~  122 (257)
T cd05060          81 PLLKYLKKR-------REIPVSDLKELAHQVAMGMAYLESKHFVHRDLA  122 (257)
T ss_pred             cHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcc
Confidence            999999763       247889999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.69  E-value=2.7e-16  Score=113.58  Aligned_cols=130  Identities=22%  Similarity=0.357  Sum_probs=101.1

Q ss_pred             HHHhhhhhhhhccccccCceEEEEEeCC------CcEEEEEecccCCCCh--HHHHHHHHHHcCC-CCCCccccceeeec
Q 047548           26 DVKKMTNSFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGNG--EEFINEVACISGT-SHVNIVTPLGICCE   96 (156)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l-~~~~i~~l~~~~~~   96 (156)
                      .++.....+.+.||+|+||.||.+...+      ++.||+|.+.......  +.+..|+.++..+ +|+|++++.+.+..
T Consensus         3 ~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~   82 (337)
T cd05054           3 EFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTK   82 (337)
T ss_pred             ccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEec
Confidence            3445566778899999999999996422      4689999887543222  4677899999999 89999999998765


Q ss_pred             c-----eeeecCCCCChHHHhhhcCCCC----------------------------------------------------
Q 047548           97 G-----LVYEFMSNGSLHKFIYDKGSMS----------------------------------------------------  119 (156)
Q Consensus        97 ~-----lv~e~~~~g~L~~~l~~~~~~~----------------------------------------------------  119 (156)
                      .     +++||+++++|.+++.......                                                    
T Consensus        83 ~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (337)
T cd05054          83 PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG  162 (337)
T ss_pred             CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence            4     8899999999999986432100                                                    


Q ss_pred             --CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          120 --TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       120 --~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                        .....+++..+..++.|++.||.|||+++++|+||.
T Consensus       163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDik  200 (337)
T cd05054         163 DELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLA  200 (337)
T ss_pred             hHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence              001257788899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.69  E-value=3.4e-16  Score=112.43  Aligned_cols=112  Identities=15%  Similarity=0.184  Sum_probs=90.7

Q ss_pred             ccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHH-HHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           37 KVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEV-ACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~-~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      .||+|+||.||++.... +..+|+|++....    .....+..|. .++..+.|+|++++.+.+...    +++||++++
T Consensus         2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~   81 (325)
T cd05602           2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG   81 (325)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence            68999999999999765 7789999986422    1123344444 356778999999999888766    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++...       ..+.+..+..++.|++.||.|||+++++|+||.
T Consensus        82 ~L~~~~~~~-------~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlk  123 (325)
T cd05602          82 ELFYHLQRE-------RCFLEPRARFYAAEIASALGYLHSLNIVYRDLK  123 (325)
T ss_pred             cHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCC
Confidence            999998753       336778888899999999999999999999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.69  E-value=4e-16  Score=110.15  Aligned_cols=116  Identities=22%  Similarity=0.218  Sum_probs=97.0

Q ss_pred             hhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           35 SDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      .+.||+|+||.||.+.... +..+|+|.+.....    ....+.+|+.++..++|++++.+.+.+...    +++||+++
T Consensus         5 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   84 (285)
T cd05632           5 YRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNG   84 (285)
T ss_pred             EEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccC
Confidence            3579999999999998765 88899998865321    123467899999999999999998877766    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++....     ...+++..+..++.|++.||.|||+.+++|+||.
T Consensus        85 ~~L~~~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dik  129 (285)
T cd05632          85 GDLKFHIYNMG-----NPGFEEERALFYAAEILCGLEDLHRENTVYRDLK  129 (285)
T ss_pred             ccHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCC
Confidence            99998886532     3358899999999999999999999999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.69  E-value=5.2e-16  Score=108.99  Aligned_cols=123  Identities=26%  Similarity=0.383  Sum_probs=99.2

Q ss_pred             hhhhccccccCceEEEEEeCC------CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----eee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LVY  100 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~  100 (156)
                      .+.+.||+|++|.||++....      +..+++|.+.......  ..+..|+.++..++|+|++++.+.+...    +++
T Consensus         9 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   88 (277)
T cd05036           9 TLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILL   88 (277)
T ss_pred             EeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEE
Confidence            455789999999999998753      4678888876433222  4588899999999999999999977665    999


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++++|.+++...+........+++..+..++.|++.|+.|||+++++|+|+.
T Consensus        89 e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlk  143 (277)
T cd05036          89 ELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIA  143 (277)
T ss_pred             ecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccc
Confidence            9999999999997653211112357889999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.69  E-value=3e-16  Score=110.83  Aligned_cols=116  Identities=21%  Similarity=0.209  Sum_probs=96.7

Q ss_pred             hhccccccCceEEEEEeCC-CcEEEEEecccCCCC----hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           35 SDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN----GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      .+.||+|+||.||++.... +..+|+|.+......    ...+..|+.++..++|++++.+.+.+...    +++||+++
T Consensus         5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g   84 (285)
T cd05630           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG   84 (285)
T ss_pred             eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCC
Confidence            4579999999999998765 889999988653211    13467899999999999999998887765    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++....     ...+++..+..++.|++.||.|||+.+++|+||.
T Consensus        85 ~~L~~~l~~~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dik  129 (285)
T cd05630          85 GDLKFHIYHMG-----EAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLK  129 (285)
T ss_pred             CcHHHHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCC
Confidence            99999886532     3347888999999999999999999999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.69  E-value=5.8e-17  Score=105.00  Aligned_cols=113  Identities=22%  Similarity=0.360  Sum_probs=96.7

Q ss_pred             hhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           35 SDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      -++||+|.||+|++++-+. .+.||+|...-...+.   ....+|+.+++.++|.|++++++..-..    +++||+.. 
T Consensus         7 mekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdq-   85 (292)
T KOG0662|consen    7 MEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-   85 (292)
T ss_pred             HHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH-
Confidence            3579999999999998655 8889999887543333   5689999999999999999999987766    99999965 


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +|.+++...      +..+.......++.|+++||.++|++++.|+|.
T Consensus        86 dlkkyfdsl------ng~~d~~~~rsfmlqllrgl~fchshnvlhrdl  127 (292)
T KOG0662|consen   86 DLKKYFDSL------NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDL  127 (292)
T ss_pred             HHHHHHHhc------CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccC
Confidence            898888765      566888888999999999999999999999986

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.69  E-value=3.9e-16  Score=111.08  Aligned_cols=121  Identities=26%  Similarity=0.374  Sum_probs=99.1

Q ss_pred             hhhhhhhccccccCceEEEEEeC------CCcEEEEEecccCCCCh--HHHHHHHHHHcCC-CCCCccccceeeecc---
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMGNG--EEFINEVACISGT-SHVNIVTPLGICCEG---   97 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~------~~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l-~~~~i~~l~~~~~~~---   97 (156)
                      ....+.+.||+|+||.||++...      .+..+|+|.+.......  +.+.+|+.++..+ +|+|++++.+.+...   
T Consensus        35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~  114 (302)
T cd05055          35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI  114 (302)
T ss_pred             HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence            34456678999999999998741      14578999887543222  5688999999999 799999999988765   


Q ss_pred             -eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 -LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 -lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       +++||+++++|.+++....     ...+++..+..++.|++.||.|||++++.|.||.
T Consensus       115 ~lv~e~~~~~~L~~~i~~~~-----~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlk  168 (302)
T cd05055         115 LVITEYCCYGDLLNFLRRKR-----ESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLA  168 (302)
T ss_pred             EEEEEcCCCCcHHHHHHhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhc
Confidence             9999999999999997532     2337889999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.69  E-value=6.4e-16  Score=107.73  Aligned_cols=115  Identities=26%  Similarity=0.405  Sum_probs=97.5

Q ss_pred             hhhccccccCceEEEEEeCCCcEEEEEecccCCCC-------hHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           34 FSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGN-------GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~-------~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ..+.||+|+||.||++....+..+++|.+......       ...+.+|+.++..++|+|++++.+.+...    +++||
T Consensus         4 ~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   83 (265)
T cd06631           4 KGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEF   83 (265)
T ss_pred             ccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEec
Confidence            45689999999999998766888999988643211       13578899999999999999999988776    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++...       ..+++..+..++.|++.||.|||+.++.|.|+.
T Consensus        84 ~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~  129 (265)
T cd06631          84 VPGGSISSILNRF-------GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIK  129 (265)
T ss_pred             CCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcC
Confidence            9999999999753       336788889999999999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.69  E-value=5.7e-16  Score=108.35  Aligned_cols=116  Identities=21%  Similarity=0.307  Sum_probs=91.9

Q ss_pred             ccccccCceEEEEEeCC---CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCC
Q 047548           37 KVRQGGYGVVYRGKLHE---GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGS  107 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~---~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~  107 (156)
                      .||+|+||.||++....   ...+++|.+.....  ....+.+|+.++..++|+|++++.+.+...    +++||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            58999999999987533   23455666554322  235788999999999999999999988766    9999999999


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |.+++......   ....+...+..++.|++.||.|||+.+++|+||.
T Consensus        82 L~~~l~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dik  126 (268)
T cd05086          82 LKSYLSQEQWH---RRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLA  126 (268)
T ss_pred             HHHHHHhhhcc---cccccHHHHHHHHHHHHHHHHHHHHCCeeccCCc
Confidence            99999764211   2335667788999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.69  E-value=5.5e-16  Score=109.16  Aligned_cols=124  Identities=24%  Similarity=0.467  Sum_probs=98.2

Q ss_pred             hhhhhccccccCceEEEEEeC-----CCcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----eee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLH-----EGRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LVY  100 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~-----~~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~  100 (156)
                      ..+.+.||+|+||.||++...     .+..+++|.+.......  ..+.+|+.++..++|+|++++.+.+...    +++
T Consensus         7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~   86 (283)
T cd05090           7 VRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLF   86 (283)
T ss_pred             ceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEE
Confidence            356678999999999999742     25788999887533222  4688899999999999999999987766    999


Q ss_pred             ecCCCCChHHHhhhcCCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMS----------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~----------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++++|.+++.......          .....+++..+..++.|++.||.|||++++.|+|+.
T Consensus        87 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlk  151 (283)
T cd05090          87 EYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLA  151 (283)
T ss_pred             EcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccc
Confidence            9999999999986432100          002246778889999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.69  E-value=5.7e-16  Score=108.76  Aligned_cols=116  Identities=22%  Similarity=0.360  Sum_probs=97.7

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      ....+.||+|.||.||++.... +..+++|.+......  .+.+.+|+.+++.++|+|++++.+.+...    +++||++
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence            3445679999999999998654 778999988643322  25688999999999999999999988776    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++..        ..+++..+..++.|++.|+.|||+++++|.|+.
T Consensus        86 ~~~L~~~~~~--------~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~  128 (277)
T cd06642          86 GGSALDLLKP--------GPLEETYIATILREILKGLDYLHSERKIHRDIK  128 (277)
T ss_pred             CCcHHHHhhc--------CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCC
Confidence            9999998853        237788899999999999999999999999875

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.69  E-value=6.8e-16  Score=110.98  Aligned_cols=115  Identities=21%  Similarity=0.280  Sum_probs=96.2

Q ss_pred             hccccc--cCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           36 DKVRQG--GYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        36 ~~lg~g--~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      ..||.|  +|++||.+.... +..||+|++.......   +.+.+|+.++..++|+|++++.+.+...    +++||+++
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            356666  889999998754 8999999987543222   5678889999999999999999998776    89999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++.+++.+..     ...+++..+..++.|++.||+|||+.+++|+|+.
T Consensus        84 ~~l~~~l~~~~-----~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlk  128 (328)
T cd08226          84 GSANSLLKTYF-----PEGMSEALIGNILFGALRGLNYLHQNGYIHRNIK  128 (328)
T ss_pred             CCHHHHHHhhc-----ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            99999987643     2347888999999999999999999999999984

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.69  E-value=3.6e-16  Score=112.29  Aligned_cols=116  Identities=16%  Similarity=0.153  Sum_probs=94.4

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCC-Cccccceeeecc----eeeec
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHV-NIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~-~i~~l~~~~~~~----lv~e~  102 (156)
                      .+.+.||+|+||.||++.... +..+|+|++....    ...+.+..|..++..+.|+ +++.+.+.+...    +++||
T Consensus         3 ~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~   82 (324)
T cd05587           3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEY   82 (324)
T ss_pred             eEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcC
Confidence            345689999999999998765 7889999987531    1225577888888888664 577777777655    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+|.+++...       ..+++.....++.|++.||.|||+++++|+||.
T Consensus        83 ~~~g~L~~~~~~~-------~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlk  128 (324)
T cd05587          83 VNGGDLMYHIQQV-------GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLK  128 (324)
T ss_pred             CCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCC
Confidence            9999999988653       347788999999999999999999999999984

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.69  E-value=6.6e-16  Score=106.97  Aligned_cols=117  Identities=24%  Similarity=0.313  Sum_probs=99.3

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCC---CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM---GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.+|+|++|.||++.... +..+++|.+....   .....+.+|+.+++.++|+|++++.+.+...    +++||+++
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd08529           4 ILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAEN   83 (256)
T ss_pred             EeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCC
Confidence            44689999999999998765 8899999886432   2235688999999999999999999988776    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++....     ...++...+..++.|++.||.|||+.++.|+|+.
T Consensus        84 ~~L~~~l~~~~-----~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~  128 (256)
T cd08529          84 GDLHKLLKMQR-----GRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIK  128 (256)
T ss_pred             CcHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            99999997632     3457888999999999999999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.69  E-value=8.3e-16  Score=109.97  Aligned_cols=115  Identities=20%  Similarity=0.167  Sum_probs=100.6

Q ss_pred             hhccccccCceEEEEEeCC-CcEEEEEecccCCCC----hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           35 SDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN----GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      .+.||.|..|+||.+..++ +..+|+|++......    ..+...|-++|..+.||.++.|+..+...    ++||||+|
T Consensus        82 lk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpG  161 (459)
T KOG0610|consen   82 LKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPG  161 (459)
T ss_pred             HHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCC
Confidence            4689999999999999877 689999999864332    24678899999999999999999999887    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      |+|..+.+...     .+.+++..+..++..++.||.|||-.+++=+|+
T Consensus       162 GdL~~LrqkQp-----~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDL  205 (459)
T KOG0610|consen  162 GDLHSLRQKQP-----GKRFSESAARFYAAEVLLALEYLHMLGIVYRDL  205 (459)
T ss_pred             ccHHHHHhhCC-----CCccchhhHHHHHHHHHHHHHHHHhhceeeccC
Confidence            99999887643     677999999999999999999999999987775

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.69  E-value=5e-16  Score=108.52  Aligned_cols=114  Identities=25%  Similarity=0.246  Sum_probs=96.3

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCC-ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCChH
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLH  109 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L~  109 (156)
                      ..+|+|+||.||++.... +..+++|.+..... ..+.+.+|+.++..++|+|++++.+.+...    +++||+++++|.
T Consensus        14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~   93 (268)
T cd06624          14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLS   93 (268)
T ss_pred             EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHH
Confidence            479999999999998655 77899998765432 235788999999999999999999988776    999999999999


Q ss_pred             HHhhhcCCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          110 KFIYDKGSMSTKNNRL--EWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       110 ~~l~~~~~~~~~~~~~--~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++....      ...  +...+..++.|++.||.|||+.++.|+|+.
T Consensus        94 ~~l~~~~------~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~  135 (268)
T cd06624          94 ALLRSKW------GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIK  135 (268)
T ss_pred             HHHHHhc------ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCC
Confidence            9997542      223  678888899999999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.69  E-value=6.9e-16  Score=107.02  Aligned_cols=117  Identities=18%  Similarity=0.145  Sum_probs=98.4

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      +.+.+|+|+||.||.+.... +..+++|.+.....  ..+.+..|+.++..++|+|++++.+.+...    +++||++++
T Consensus         4 ~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   83 (255)
T cd08219           4 VLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGG   83 (255)
T ss_pred             EEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCC
Confidence            45689999999999998765 88899998764322  235678899999999999999999888776    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++.+++....     ...++...+..++.|++.||.|||++++.|.|+.
T Consensus        84 ~l~~~~~~~~-----~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~  127 (255)
T cd08219          84 DLMQKIKLQR-----GKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIK  127 (255)
T ss_pred             cHHHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Confidence            9999886532     3447788999999999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.69  E-value=7.9e-16  Score=108.30  Aligned_cols=117  Identities=20%  Similarity=0.331  Sum_probs=98.1

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC-ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      .+.+.||+|+||.||++.... +..+++|.+..... ..+.+.+|+.+++.+.|+|++++.+.+...    +++||++++
T Consensus         8 ~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~   87 (282)
T cd06643           8 EIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGG   87 (282)
T ss_pred             HHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCC
Confidence            345679999999999999765 77788888764332 235688899999999999999999888776    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|..++...      ...+++..+..++.|++.||.|||+.+++|+|+.
T Consensus        88 ~l~~~~~~~------~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlk  130 (282)
T cd06643          88 AVDAVMLEL------ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLK  130 (282)
T ss_pred             cHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence            998887643      3457889999999999999999999999999985

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.69  E-value=7.1e-16  Score=107.86  Aligned_cols=117  Identities=25%  Similarity=0.301  Sum_probs=93.5

Q ss_pred             ccccccCceEEEEEeCC---CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCC
Q 047548           37 KVRQGGYGVVYRGKLHE---GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGS  107 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~---~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~  107 (156)
                      .||+|+||.||++...+   +..+++|.+.......  ..+.+|+.++..++|+|++++.+.+...    +++||+++|+
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD   81 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence            58999999999998643   4568888876543222  4688899999999999999999988765    9999999999


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |.+++......  .....++..+..++.|++.||.|||+++++|.|+.
T Consensus        82 L~~~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlk  127 (269)
T cd05087          82 LKGYLRSCRKA--ELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLA  127 (269)
T ss_pred             HHHHHHHhhhc--ccccccHHHHHHHHHHHHHHHHHHHHCCEeccccC
Confidence            99999753210  02235567778899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.69  E-value=7.7e-16  Score=108.51  Aligned_cols=119  Identities=23%  Similarity=0.247  Sum_probs=99.4

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ....+.+.||+|+||.||++.... +..+++|.+......  ...+.+|+.++..++|+|++++.+.+...    +++||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            344566789999999999998765 788999987653322  25688999999999999999999998876    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA-VATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~-~~~~h~~i~  155 (156)
                      +++++|.+++...       ..+++.....++.+++.+|.|||+ .+++|+|+.
T Consensus        85 ~~~~~L~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~  131 (284)
T cd06620          85 MDCGSLDRIYKKG-------GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIK  131 (284)
T ss_pred             CCCCCHHHHHHhc-------cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCC
Confidence            9999999988653       337888999999999999999997 479999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.69  E-value=7.2e-16  Score=106.80  Aligned_cols=117  Identities=20%  Similarity=0.226  Sum_probs=98.5

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.||+|++|.||++.... +..+++|.+.....   ....+.+|+.+++.++|+|++++.+.+...    +++||+++
T Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd08220           4 KIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPG   83 (256)
T ss_pred             EEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCC
Confidence            45689999999999998754 78899998865322   225688999999999999999999887655    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++....     ...+++..+..++.+++.+|.|||+++++|+|+.
T Consensus        84 ~~L~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~  128 (256)
T cd08220          84 GTLAEYIQKRC-----NSLLDEDTILHFFVQILLALHHVHTKLILHRDLK  128 (256)
T ss_pred             CCHHHHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            99999997642     3347888999999999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.68  E-value=8.7e-16  Score=106.52  Aligned_cols=118  Identities=14%  Similarity=0.137  Sum_probs=98.8

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .+.+.+|+|+||.|+.+.... +..+++|.+.....   ..+.+.+|+.+++.++|+|++++.+.+...    +++||++
T Consensus         3 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~   82 (256)
T cd08221           3 IPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYAN   82 (256)
T ss_pred             eEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecC
Confidence            345689999999999888655 78889998764322   225688999999999999999999998877    8899999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++....     ...+++..+..++.|++.||.|||+.++.|+|+.
T Consensus        83 ~~~L~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~  128 (256)
T cd08221          83 GGTLYDKIVRQK-----GQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIK  128 (256)
T ss_pred             CCcHHHHHHhcc-----ccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Confidence            999999997542     2347888999999999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.68  E-value=5.7e-16  Score=109.75  Aligned_cols=116  Identities=28%  Similarity=0.384  Sum_probs=98.1

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC------hHHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN------GEEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~------~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ++.+.||+|++|.||++.... +..+++|.+......      ...+..|+.++..++|+|++++.+.+...    +++|
T Consensus         3 ~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   82 (298)
T cd07841           3 EKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFE   82 (298)
T ss_pred             eeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEc
Confidence            345689999999999999764 889999998754322      24567899999999999999999998876    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+ +++|.+++...      ...+++..+..++.|++.||.|||++++.|+|+.
T Consensus        83 ~~-~~~L~~~i~~~------~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~  129 (298)
T cd07841          83 FM-ETDLEKVIKDK------SIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLK  129 (298)
T ss_pred             cc-CCCHHHHHhcc------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCC
Confidence            99 88999998753      2247889999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.68  E-value=1.2e-16  Score=110.94  Aligned_cols=115  Identities=28%  Similarity=0.432  Sum_probs=98.6

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCChH---HHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGE---EFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~---~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.||+|+||.||++.... +..+|+|.+........   ...+|+..+..++|+|++++.+.+...    +++|++++
T Consensus         3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~   82 (260)
T PF00069_consen    3 LVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPG   82 (260)
T ss_dssp             EEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETT
T ss_pred             EeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccccc
Confidence            45789999999999999876 67899999987543332   235589999999999999999988765    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++..       ...++...+..++.|++.||.+||++++.|+||.
T Consensus        83 ~~L~~~l~~-------~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dik  125 (260)
T PF00069_consen   83 GSLQDYLQK-------NKPLSEEEILKIAYQILEALAYLHSKGIVHRDIK  125 (260)
T ss_dssp             EBHHHHHHH-------HSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBS
T ss_pred             ccccccccc-------cccccccccccccccccccccccccccccccccc
Confidence            999999973       3447899999999999999999999999999985

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.68  E-value=9.1e-16  Score=106.34  Aligned_cols=120  Identities=29%  Similarity=0.539  Sum_probs=99.5

Q ss_pred             hccccccCceEEEEEeCC----CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.||+|+||.||++....    +..+++|.+......  .+.+.+|+..+..++|++++++.+.+...    +++||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            368999999999998753    778999998865433  36788999999999999999999988876    99999999


Q ss_pred             CChHHHhhhcCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSM--STKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~--~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++......  ......+++..+..++.|++.||.|||++++.|+||.
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~  132 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLA  132 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccC
Confidence            9999999764100  0002457899999999999999999999999999985

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.68  E-value=9.3e-16  Score=109.17  Aligned_cols=124  Identities=25%  Similarity=0.443  Sum_probs=97.3

Q ss_pred             hhhhhccccccCceEEEEEeCC-Cc--EEEEEecccCCC--ChHHHHHHHHHHcCC-CCCCccccceeeecc----eeee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GR--VAAVKVLSESMG--NGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~--~~a~k~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ..+.+.||+|+||.||++.... +.  .+++|.+.....  ....+.+|+.++..+ +|+|++++.+.+...    +++|
T Consensus         9 ~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e   88 (303)
T cd05088           9 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE   88 (303)
T ss_pred             ceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEE
Confidence            3456789999999999998754 43  456776654221  224678899999999 899999999988776    9999


Q ss_pred             cCCCCChHHHhhhcCCCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMST---------KNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~---------~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++++|.+++........         ....++...+..++.|++.|++|||+++++|+||.
T Consensus        89 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlk  151 (303)
T cd05088          89 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLA  151 (303)
T ss_pred             eCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccc
Confidence            9999999999975431110         12347788999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.68  E-value=8.1e-16  Score=107.16  Aligned_cols=121  Identities=21%  Similarity=0.302  Sum_probs=100.5

Q ss_pred             hhhhhccccccCceEEEEEeC-CCcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLH-EGRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~-~~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ..+.+.||+|++|.||++... .+..+++|.++...    .....+.+|+.++..+.|++++++.+.+...    +++||
T Consensus         4 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   83 (267)
T cd08224           4 FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLEL   83 (267)
T ss_pred             eeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEec
Confidence            345678999999999999986 48899999886421    1235688999999999999999999988776    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++.....   ....++...+..++.+++.||.|||+.+++|+|+.
T Consensus        84 ~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~  133 (267)
T cd08224          84 ADAGDLSRMIKHFKK---QKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIK  133 (267)
T ss_pred             CCCCCHHHHHHHhcc---cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcC
Confidence            999999999865321   13447889999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.68  E-value=8.4e-16  Score=107.32  Aligned_cols=117  Identities=25%  Similarity=0.459  Sum_probs=97.7

Q ss_pred             hhhhccccccCceEEEEEeCC-C---cEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-G---RVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~---~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      +..+.+|+|+||.||++.... +   ..+++|.+......  .+.+..|+.++..+.|+|++++.+.+...    +++||
T Consensus         8 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (268)
T cd05063           8 TKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEY   87 (268)
T ss_pred             eEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEc
Confidence            445789999999999998653 2   36889988654322  25688899999999999999999988776    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++...      ...+++..+..++.|++.|+.|||+.++.|.|+.
T Consensus        88 ~~~~~L~~~~~~~------~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlk  134 (268)
T cd05063          88 MENGALDKYLRDH------DGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLA  134 (268)
T ss_pred             CCCCCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence            9999999998754      3347888899999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.68  E-value=8.1e-16  Score=106.77  Aligned_cols=118  Identities=25%  Similarity=0.420  Sum_probs=97.9

Q ss_pred             hhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc-----eeeecCCC
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG-----LVYEFMSN  105 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----lv~e~~~~  105 (156)
                      ...+.+.+|+|+||.||++... +..+++|.+... ...+.+.+|+.++..++|++++++.+.+...     +++||+++
T Consensus         7 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~   84 (256)
T cd05082           7 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK   84 (256)
T ss_pred             hCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC-chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCC
Confidence            3455678999999999999765 667899987643 2346788999999999999999999876432     89999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++....     ...+++.....++.|++.||.|||++++.|+||.
T Consensus        85 ~~L~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk  129 (256)
T cd05082          85 GSLVDYLRSRG-----RSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLA  129 (256)
T ss_pred             CcHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccc
Confidence            99999987542     2347788999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.68  E-value=1.1e-15  Score=107.51  Aligned_cols=123  Identities=28%  Similarity=0.545  Sum_probs=98.6

Q ss_pred             hhhhccccccCceEEEEEeCC------CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----eee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LVY  100 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~  100 (156)
                      .+.+.||+|+||.||.+....      ...+++|.+.......  ..+.+|+.++..++|+|++++.+.+...    +++
T Consensus         8 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~   87 (283)
T cd05048           8 RFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLF   87 (283)
T ss_pred             chhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEE
Confidence            456789999999999998643      2578999887543222  4688999999999999999999988765    899


Q ss_pred             ecCCCCChHHHhhhcCCCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMST---------KNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~---------~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++++|.+++........         ....++...+..++.|++.||.|||++++.|+||.
T Consensus        88 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlk  151 (283)
T cd05048          88 EYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLA  151 (283)
T ss_pred             ecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence            99999999999975421100         01446788899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.68  E-value=1.4e-15  Score=106.80  Aligned_cols=115  Identities=17%  Similarity=0.348  Sum_probs=97.6

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      ...+.||+|+||.||.+.... +..+++|.+......  ...+.+|+.++..+.|++++++.+.+...    +++||+++
T Consensus         7 ~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   86 (277)
T cd06640           7 TKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGG   86 (277)
T ss_pred             hhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCC
Confidence            345679999999999998765 788999988653322  25688899999999999999999988876    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++..        ..++......++.|++.||.|||++++.|.|+.
T Consensus        87 ~~L~~~i~~--------~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~  128 (277)
T cd06640          87 GSALDLLRA--------GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIK  128 (277)
T ss_pred             CcHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCC
Confidence            999998863        236788888999999999999999999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.68  E-value=9.3e-16  Score=107.91  Aligned_cols=116  Identities=19%  Similarity=0.314  Sum_probs=99.2

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .+.+.||+|++|.||++.... +..+++|.+.....   ....+.+|+.+++.+.|+|++++.+.+...    +++||+ 
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-   81 (286)
T cd07832           3 KILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-   81 (286)
T ss_pred             eEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-
Confidence            355689999999999999764 88999999875432   235788999999999999999999988766    999999 


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++...      ...+++..+..++.|++.+|.|||+.++.|.|+.
T Consensus        82 ~~~L~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~  126 (286)
T cd07832          82 PSDLSEVLRDE------ERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLK  126 (286)
T ss_pred             CCCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcC
Confidence            99999998754      3447889999999999999999999999999985

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.68  E-value=4.3e-16  Score=121.38  Aligned_cols=116  Identities=17%  Similarity=0.198  Sum_probs=97.9

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC----hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN----GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.+.||+|+||.||++.... +..||+|++......    ...+..|+.++..++|+++++++..+...    ++|||+
T Consensus         7 ~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~   86 (669)
T cd05610           7 VIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYL   86 (669)
T ss_pred             EEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCC
Confidence            345789999999999999875 889999998753221    14678899999999999999998877655    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++...       ..+++..+..++.|++.||.|||+.+++|+||.
T Consensus        87 ~g~~L~~li~~~-------~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLK  131 (669)
T cd05610          87 IGGDVKSLLHIY-------GYFDEEMAVKYISEVALALDYLHRHGIIHRDLK  131 (669)
T ss_pred             CCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCcc
Confidence            999999998753       336788889999999999999999999999984

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.68  E-value=8.8e-16  Score=108.96  Aligned_cols=116  Identities=22%  Similarity=0.308  Sum_probs=98.0

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      ..+.+.+|+|++|.||++.... +..+++|.+...... ...+.+|+.+++.+.|+|++++.+.+...    +++||+++
T Consensus        22 y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~  101 (296)
T cd06654          22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG  101 (296)
T ss_pred             eeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCC
Confidence            3445679999999999998654 788999988654322 35688899999999999999999888765    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++..        ..++...+..++.|++.||.|||+.++.|+|+.
T Consensus       102 ~~L~~~~~~--------~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLk  143 (296)
T cd06654         102 GSLTDVVTE--------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK  143 (296)
T ss_pred             CCHHHHHHh--------cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            999999864        236788899999999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.68  E-value=5.9e-16  Score=109.44  Aligned_cols=116  Identities=22%  Similarity=0.287  Sum_probs=99.0

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.+.||+|++|.||.+.... +..+++|.+....    .....+.+|+.+++.+.|+|++++.+.+...    +++||+
T Consensus         4 ~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   83 (290)
T cd05580           4 EFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYV   83 (290)
T ss_pred             EEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecC
Confidence            345689999999999999765 8899999886532    1235688899999999999999999988776    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++...       ..++...+..++.|++.||.|||+.+++|+|+.
T Consensus        84 ~~~~L~~~~~~~-------~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~  128 (290)
T cd05580          84 PGGELFSHLRKS-------GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLK  128 (290)
T ss_pred             CCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCC
Confidence            999999998753       347888999999999999999999999999985

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=1.2e-15  Score=106.21  Aligned_cols=116  Identities=22%  Similarity=0.232  Sum_probs=98.1

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC------hHHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN------GEEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~------~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ...+.+|+|++|.||.+.... +..+++|.+......      .+.+.+|+.++..++|+|++++.+.+...    +++|
T Consensus         5 ~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   84 (263)
T cd06625           5 RRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFME   84 (263)
T ss_pred             cccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEE
Confidence            345789999999999998654 889999988643221      14578899999999999999999998876    8999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++++|.+++...       ..++......++.|++.||.|||+.+++|+|+.
T Consensus        85 ~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~  131 (263)
T cd06625          85 YMPGGSVKDQLKAY-------GALTETVTRKYTRQILEGVEYLHSNMIVHRDIK  131 (263)
T ss_pred             ECCCCcHHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            99999999998753       337788889999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.68  E-value=8.5e-16  Score=107.16  Aligned_cols=120  Identities=19%  Similarity=0.251  Sum_probs=98.8

Q ss_pred             hhhhccccccCceEEEEEeC-CCcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLH-EGRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~-~~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.+.||+|++|.||++... .+..+++|.+.....    ....+.+|+.++..+.|+|++++.+.+...    +++||+
T Consensus         5 ~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~   84 (267)
T cd08229           5 RIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELA   84 (267)
T ss_pred             hhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEec
Confidence            45678999999999999865 488999998764321    124678899999999999999999888765    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++.....   ....+++..+..++.|++.||.|||++++.|.|+.
T Consensus        85 ~~~~L~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~  133 (267)
T cd08229          85 DAGDLSRMIKHFKK---QKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIK  133 (267)
T ss_pred             CCCCHHHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            99999998864211   03457889999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.68  E-value=8.2e-16  Score=108.75  Aligned_cols=119  Identities=21%  Similarity=0.349  Sum_probs=100.1

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      ...+.+.||+|+||.||++.... +..+++|.+...... .+.+..|+.++..+.|+|++++.+.+...    +++||++
T Consensus        13 ~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   92 (292)
T cd06644          13 VWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCP   92 (292)
T ss_pred             hhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCC
Confidence            34456789999999999998765 788999998654322 35688899999999999999999987665    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|..++...      ...+++..+..++.|++.++.|||+.+++|+|+.
T Consensus        93 ~~~l~~~~~~~------~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlk  137 (292)
T cd06644          93 GGAVDAIMLEL------DRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLK  137 (292)
T ss_pred             CCcHHHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCC
Confidence            99998887653      3347889999999999999999999999999975

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.68  E-value=6.5e-16  Score=109.49  Aligned_cols=125  Identities=22%  Similarity=0.408  Sum_probs=97.6

Q ss_pred             hhhhhhccccccCceEEEEEeCC---------------CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCcccccee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE---------------GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGI   93 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~---------------~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~   93 (156)
                      ...+.+.||+|+||.||.+....               ...+++|.+......  ...+.+|+.++..++|+|++++.+.
T Consensus         6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~   85 (295)
T cd05097           6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGV   85 (295)
T ss_pred             hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEE
Confidence            34556789999999999986532               235889988753222  2468899999999999999999998


Q ss_pred             eecc----eeeecCCCCChHHHhhhcCCCC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           94 CCEG----LVYEFMSNGSLHKFIYDKGSMS-----TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        94 ~~~~----lv~e~~~~g~L~~~l~~~~~~~-----~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +...    +++||+++++|.+++......+     .....+++..++.++.|++.||.|||++++.|+|+.
T Consensus        86 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlk  156 (295)
T cd05097          86 CVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLA  156 (295)
T ss_pred             EcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccC
Confidence            8776    9999999999999986432100     001235778889999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.68  E-value=9.3e-16  Score=106.23  Aligned_cols=117  Identities=26%  Similarity=0.380  Sum_probs=101.1

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      ..+.+.+|+|.||.||++.... +..+++|.+..... .+.+.+|+.+++.++|+|++++.+.+...    +++|+++++
T Consensus         5 y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~   83 (256)
T cd06612           5 FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAG   83 (256)
T ss_pred             chhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCC
Confidence            3456789999999999999876 78899998865422 56789999999999999999999988776    899999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++...      ...+++..+..++.|++.||.|||+.+++|+|+.
T Consensus        84 ~L~~~l~~~------~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~  126 (256)
T cd06612          84 SVSDIMKIT------NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIK  126 (256)
T ss_pred             cHHHHHHhC------ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            999998653      3447889999999999999999999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.68  E-value=1.1e-15  Score=107.60  Aligned_cols=117  Identities=21%  Similarity=0.359  Sum_probs=97.2

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.||+|++|.||++.... +..+++|.+......   ...+.+|+.++..+.|+|++++.+.+...    +++||++ 
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-   82 (285)
T cd07861           4 KIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-   82 (285)
T ss_pred             EeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-
Confidence            44679999999999998764 889999988653222   25678899999999999999999998776    8999997 


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++.....    +..++...+..++.|++.||.|||+++++|+|+.
T Consensus        83 ~~l~~~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~  128 (285)
T cd07861          83 MDLKKYLDSLPK----GQYMDAELVKSYLYQILQGILFCHSRRVLHRDLK  128 (285)
T ss_pred             CCHHHHHhcCCC----CCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCC
Confidence            588888865321    3457889999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.68  E-value=1.1e-15  Score=107.23  Aligned_cols=125  Identities=21%  Similarity=0.366  Sum_probs=99.4

Q ss_pred             hhhhhhccccccCceEEEEEeCC------CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----e
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----L   98 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----l   98 (156)
                      ...+...||+|+||.||++....      +..+++|.+.......  ..+.+|+.++..+.|+|++++.+.+...    +
T Consensus         7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~   86 (277)
T cd05032           7 KITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLV   86 (277)
T ss_pred             HeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEE
Confidence            34456789999999999998643      3689999986543222  4678899999999999999999988776    9


Q ss_pred             eeecCCCCChHHHhhhcCCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMST---KNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~---~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++||+++++|.+++........   ....+++..+..++.|++.||.|||++++.|.||.
T Consensus        87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~  146 (277)
T cd05032          87 VMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLA  146 (277)
T ss_pred             EEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccC
Confidence            9999999999999975432100   02236778899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.68  E-value=9.8e-16  Score=106.56  Aligned_cols=116  Identities=21%  Similarity=0.301  Sum_probs=99.0

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .+.+.||+|+||.||++.... +..+++|.+......   .+.+..|+.+++.++|++++++.+.+...    +++||++
T Consensus         3 ~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (264)
T cd06626           3 QRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCS   82 (264)
T ss_pred             eeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCC
Confidence            345689999999999998754 789999998765442   36788999999999999999999987665    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++...       ..+++.....++.+++.||.|||++++.|.|+.
T Consensus        83 ~~~L~~~~~~~-------~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~  126 (264)
T cd06626          83 GGTLEELLEHG-------RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIK  126 (264)
T ss_pred             CCcHHHHHhhc-------CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            99999998753       236788889999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.68  E-value=3.8e-17  Score=113.30  Aligned_cols=119  Identities=21%  Similarity=0.329  Sum_probs=104.4

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .--++..+||+|+||.|+++.++. |..+|+|..... .+-+.+..|+.++.+..++++++++|.+...    +|||||-
T Consensus        33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG  111 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG  111 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence            334566789999999999998876 888999877543 2558899999999999999999999988776    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .|+..+.++-.      ++++++..+..+..+.++||.|||....+|+||-
T Consensus       112 AGSiSDI~R~R------~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIK  156 (502)
T KOG0574|consen  112 AGSISDIMRAR------RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIK  156 (502)
T ss_pred             CCcHHHHHHHh------cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcc
Confidence            99999999765      6779999999999999999999999999999984

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.68  E-value=9.3e-16  Score=108.97  Aligned_cols=116  Identities=24%  Similarity=0.340  Sum_probs=96.9

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      .+.+.||+|+||.||++.... +..+++|.+.....  ....+.+|+.++..++|+|++++.+.+...    +++||++ 
T Consensus         9 ~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-   87 (301)
T cd07873           9 IKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-   87 (301)
T ss_pred             EEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-
Confidence            345689999999999998765 78899998864322  224677899999999999999999998776    9999997 


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++...      ...++...+..++.|++.||.|||+++++|+|+.
T Consensus        88 ~~l~~~l~~~------~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlk  131 (301)
T cd07873          88 KDLKQYLDDC------GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLK  131 (301)
T ss_pred             cCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence            4898888654      2347788999999999999999999999999985

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.68  E-value=1.2e-15  Score=105.70  Aligned_cols=115  Identities=27%  Similarity=0.307  Sum_probs=97.5

Q ss_pred             hhhccccccCceEEEEEeC-CCcEEEEEecccCCC------ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           34 FSDKVRQGGYGVVYRGKLH-EGRVAAVKVLSESMG------NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~-~~~~~a~k~~~~~~~------~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ..+.||+|++|.||++... ++..+++|.+.....      ..+.+.+|+.++..++|++++++.+.+...    +++||
T Consensus         4 ~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   83 (258)
T cd06632           4 KGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLEL   83 (258)
T ss_pred             ccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEe
Confidence            3468999999999999876 488999998864321      125688999999999999999999988765    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++...       ..+++..+..++.|++.|+.|||+.+++|.||.
T Consensus        84 ~~~~~L~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~  129 (258)
T cd06632          84 VPGGSLAKLLKKY-------GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIK  129 (258)
T ss_pred             cCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            9999999998753       336788889999999999999999999999985

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.68  E-value=3.8e-18  Score=115.03  Aligned_cols=117  Identities=17%  Similarity=0.196  Sum_probs=99.4

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccC---CCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES---MGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      +++-++||+|.|+.|+++..+. |..+++|++...   ..+.+.+.+|+++-..++||||+++...+...    +++|++
T Consensus        13 y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m   92 (355)
T KOG0033|consen   13 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV   92 (355)
T ss_pred             hhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecc
Confidence            4556789999999999998665 888888888752   33447899999999999999999998877665    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .|++|..-+...       ..+++...-.++.||+++|+|+|.++++|+|..
T Consensus        93 ~G~dl~~eIV~R-------~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvk  137 (355)
T KOG0033|consen   93 TGGELFEDIVAR-------EFYSEADASHCIQQILEALAYCHSNGIVHRDLK  137 (355)
T ss_pred             cchHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCC
Confidence            999999887653       337788999999999999999999999999963

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.68  E-value=7.2e-16  Score=113.45  Aligned_cols=111  Identities=14%  Similarity=0.129  Sum_probs=93.3

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      +.+.+.||+|+||.||++.... ++.+|+|...     ...+.+|+.++..++|+||+++.+.+...    +++|++. +
T Consensus        94 y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~  167 (391)
T PHA03212         94 FSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-T  167 (391)
T ss_pred             cEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-C
Confidence            3455789999999999998765 8899999643     24567899999999999999999988765    8888885 6


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|..++...       ..++...+..++.|++.||.|||+++++|+||.
T Consensus       168 ~L~~~l~~~-------~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiK  209 (391)
T PHA03212        168 DLYCYLAAK-------RNIAICDILAIERSVLRAIQYLHENRIIHRDIK  209 (391)
T ss_pred             CHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            898888653       337788899999999999999999999999984

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.68  E-value=1.7e-15  Score=105.43  Aligned_cols=113  Identities=28%  Similarity=0.457  Sum_probs=91.6

Q ss_pred             ccccccCceEEEEEeCC----CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc-----eeeecCCC
Q 047548           37 KVRQGGYGVVYRGKLHE----GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG-----LVYEFMSN  105 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----lv~e~~~~  105 (156)
                      .||+|+||.||++....    ...+++|.+.....  ....+..|+.+++.++|+|++++.+.+...     +++||+++
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~   81 (262)
T cd05058           2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH   81 (262)
T ss_pred             cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence            68999999999998532    45788998754321  225678899999999999999999976532     89999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++...      ....+...+..++.|++.|+.|||+.++.|+|+.
T Consensus        82 ~~L~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk  125 (262)
T cd05058          82 GDLRNFIRSE------THNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLA  125 (262)
T ss_pred             CCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccC
Confidence            9999999753      2235667788899999999999999999999985

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.68  E-value=9.7e-16  Score=107.90  Aligned_cols=115  Identities=23%  Similarity=0.347  Sum_probs=95.8

Q ss_pred             hhhhccccccCceEEEEEe-----CCCcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc------ee
Q 047548           33 SFSDKVRQGGYGVVYRGKL-----HEGRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG------LV   99 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~-----~~~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv   99 (156)
                      .+.+.||+|+||.||.+.+     ..+..+++|.+.....  ....+.+|+.+++.++|+|++++.+.+...      ++
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            4557899999999988653     2367899999875432  235678999999999999999999876542      89


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++++|.+++...        .+++..+..++.|++.||.|||++++.|+||.
T Consensus        87 ~e~~~~~~l~~~~~~~--------~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlk  134 (283)
T cd05080          87 MEYVPLGSLRDYLPKH--------KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLA  134 (283)
T ss_pred             ecCCCCCCHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHCCeeccccC
Confidence            9999999999998642        37899999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.68  E-value=9.7e-16  Score=109.03  Aligned_cols=115  Identities=25%  Similarity=0.474  Sum_probs=95.1

Q ss_pred             hhccccccCceEEEEEeCC-Cc----EEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc---eeeecCC
Q 047548           35 SDKVRQGGYGVVYRGKLHE-GR----VAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG---LVYEFMS  104 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-~~----~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~~~  104 (156)
                      .+.||+|+||.||++.... +.    .+++|.+.......  ..+.+|+.++..++|+|++++.+.+...   ++++|++
T Consensus        12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v~e~~~   91 (303)
T cd05110          12 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMP   91 (303)
T ss_pred             ccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceeeehhcC
Confidence            4579999999999998643 33    57888876543222  3578899999999999999999988765   8999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|+|.+++...      ...+++..+..++.|++.||.|||+++++|.||.
T Consensus        92 ~g~l~~~~~~~------~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dik  136 (303)
T cd05110          92 HGCLLDYVHEH------KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLA  136 (303)
T ss_pred             CCCHHHHHHhc------ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccc
Confidence            99999998754      2347788999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.67  E-value=1.4e-15  Score=106.84  Aligned_cols=116  Identities=19%  Similarity=0.342  Sum_probs=97.9

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      ..+.+.||+|+||.||++.... +..+|+|.+......  .+.+.+|+..+..++|+|++++++.+...    +++||++
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG   85 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence            3455689999999999998654 789999987643222  25688899999999999999999988876    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++..        ..+++..+..++.|++.++.|||+.++.|.|+.
T Consensus        86 ~~~l~~~i~~--------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~  128 (277)
T cd06641          86 GGSALDLLEP--------GPLDETQIATILREILKGLDYLHSEKKIHRDIK  128 (277)
T ss_pred             CCcHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCC
Confidence            9999998863        237788999999999999999999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.67  E-value=5.1e-16  Score=116.92  Aligned_cols=120  Identities=13%  Similarity=0.125  Sum_probs=96.8

Q ss_pred             hhhhccccccCceEEEEEeCC--CcEEEEEecccCCCCh-HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE--GRVAAVKVLSESMGNG-EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~--~~~~a~k~~~~~~~~~-~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      .+.+.+|.|+||.||.+....  +..+++|.+....... ..+.+|+.++..++|+|++++++.+...    ++|||+++
T Consensus        70 ~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~g  149 (478)
T PTZ00267         70 VLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSG  149 (478)
T ss_pred             EEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCC
Confidence            445689999999999998543  5678888765432222 4577899999999999999999998776    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+|.+++.....   ....+++..+..++.|++.||.|||+++++|+||.
T Consensus       150 g~L~~~l~~~~~---~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlk  196 (478)
T PTZ00267        150 GDLNKQIKQRLK---EHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLK  196 (478)
T ss_pred             CCHHHHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcC
Confidence            999998864211   03347888899999999999999999999999984

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.67  E-value=1.3e-15  Score=106.93  Aligned_cols=127  Identities=20%  Similarity=0.359  Sum_probs=98.7

Q ss_pred             hhhhhhhhccccccCceEEEEEeCC------CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc---
Q 047548           29 KMTNSFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG---   97 (156)
Q Consensus        29 ~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---   97 (156)
                      .....+...+|+|+||.||.+....      +..+++|.+.....  ....+.+|+.++..++|+|++++.+.+...   
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~   84 (277)
T cd05062           5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT   84 (277)
T ss_pred             HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCe
Confidence            3445566789999999999987532      46789998764322  224688999999999999999999988765   


Q ss_pred             -eeeecCCCCChHHHhhhcCCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 -LVYEFMSNGSLHKFIYDKGSMST---KNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 -lv~e~~~~g~L~~~l~~~~~~~~---~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       +++||+++++|.+++........   ....+++..+..++.|++.|+.|||+.+++|+|+.
T Consensus        85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlk  146 (277)
T cd05062          85 LVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLA  146 (277)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcc
Confidence             89999999999999875321100   01235677889999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.67  E-value=7.6e-16  Score=110.87  Aligned_cols=115  Identities=18%  Similarity=0.226  Sum_probs=95.2

Q ss_pred             hhhccccccCceEEEEEeC----CCcEEEEEecccCC-----CChHHHHHHHHHHcCC-CCCCccccceeeecc----ee
Q 047548           34 FSDKVRQGGYGVVYRGKLH----EGRVAAVKVLSESM-----GNGEEFINEVACISGT-SHVNIVTPLGICCEG----LV   99 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~----~~~~~a~k~~~~~~-----~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv   99 (156)
                      +.+.||+|+||.||.+...    .+..+|+|++....     ...+.+..|+.++..+ .|++++.+.+.+...    ++
T Consensus         4 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv   83 (332)
T cd05614           4 LLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLI   83 (332)
T ss_pred             EEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEE
Confidence            4568999999999998752    37889999986421     1124577899999998 589999998887765    99


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        84 ~e~~~~g~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlk  132 (332)
T cd05614          84 LDYVSGGEMFTHLYQR-------DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIK  132 (332)
T ss_pred             EeCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCC
Confidence            9999999999998753       347888999999999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.67  E-value=5.9e-16  Score=111.14  Aligned_cols=115  Identities=17%  Similarity=0.139  Sum_probs=93.6

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      +.+.||+|+||.||++.... +..+|+|.+.....    .......|..++..+ .|++++.+.+.+...    +++||+
T Consensus         4 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~   83 (323)
T cd05616           4 FLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYV   83 (323)
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCC
Confidence            45689999999999998765 78999999875321    113456677777766 578888888887665    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|+|.+.+...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        84 ~~g~L~~~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlk  128 (323)
T cd05616          84 NGGDLMYQIQQV-------GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLK  128 (323)
T ss_pred             CCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCC
Confidence            999999988653       337788999999999999999999999999984

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.67  E-value=1.5e-15  Score=106.74  Aligned_cols=113  Identities=22%  Similarity=0.242  Sum_probs=95.0

Q ss_pred             cccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCCh
Q 047548           38 VRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSL  108 (156)
Q Consensus        38 lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L  108 (156)
                      ||+|+||.||.+.... +..+++|.+....    .....+..|+.++..++|++++++.+.+...    +++||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            6899999999998765 8899999886432    1224567899999999999999998887765    99999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+++....     ...+++..+..++.|++.||.|||+.+++|+||.
T Consensus        81 ~~~l~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~  122 (277)
T cd05577          81 KYHIYNVG-----EPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLK  122 (277)
T ss_pred             HHHHHHcC-----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            99987642     2357889999999999999999999999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.67  E-value=1.6e-15  Score=105.83  Aligned_cols=115  Identities=23%  Similarity=0.352  Sum_probs=96.4

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh----------HHHHHHHHHHcCCCCCCccccceeeecc----e
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG----------EEFINEVACISGTSHVNIVTPLGICCEG----L   98 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~----------~~~~~e~~~l~~l~~~~i~~l~~~~~~~----l   98 (156)
                      +...||+|++|.||.+.... +..+++|.+.......          +.+.+|+.++..++|+|++++.+.+...    +
T Consensus         4 ~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (267)
T cd06628           4 KGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNI   83 (267)
T ss_pred             ccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEE
Confidence            45689999999999998654 7889999876432111          3577899999999999999999988776    9


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++||+++++|.+++...       ..++...+..++.|++.||.|||+++++|+||.
T Consensus        84 v~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~  133 (267)
T cd06628          84 FLEYVPGGSVAALLNNY-------GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIK  133 (267)
T ss_pred             EEEecCCCCHHHHHHhc-------cCccHHHHHHHHHHHHHHHHHHHhcCcccccCC
Confidence            99999999999999753       336788889999999999999999999999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=1.2e-15  Score=106.06  Aligned_cols=117  Identities=23%  Similarity=0.348  Sum_probs=99.9

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      .+.+.+|+|+||.||.+.... +..+++|.+...... .+.+.+|+.++..++|+|++++.+.+...    +++||++++
T Consensus         6 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~   85 (262)
T cd06613           6 ELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGG   85 (262)
T ss_pred             EEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCC
Confidence            455789999999999998754 778999988754333 36788999999999999999999887766    899999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++...      ...++...+..++.|++.||.|||++++.|+|+.
T Consensus        86 ~l~~~~~~~------~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~  128 (262)
T cd06613          86 SLQDIYQVT------RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIK  128 (262)
T ss_pred             cHHHHHHhh------ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Confidence            999988754      2457889999999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=6.7e-16  Score=111.11  Aligned_cols=111  Identities=23%  Similarity=0.212  Sum_probs=89.4

Q ss_pred             cccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCC---CCCCccccceeeecc----eeeecCCC
Q 047548           38 VRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGT---SHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        38 lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l---~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      ||+|+||.||++.... +..+|+|++.....    .......|..++...   .|++++++...+...    +++||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            6999999999998765 88999999864211    112344555555544   699999998887766    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+|..++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        81 g~L~~~l~~~-------~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlk  123 (330)
T cd05586          81 GELFWHLQKE-------GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLK  123 (330)
T ss_pred             ChHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCC
Confidence            9999988653       347889999999999999999999999999984

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.67  E-value=8.1e-16  Score=116.24  Aligned_cols=145  Identities=19%  Similarity=0.191  Sum_probs=107.4

Q ss_pred             HHHHHhhCCCCCCCCChH----HHHhhhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHH
Q 047548            8 DAVIRKYGSLAPKGYNYS----DVKKMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACI   79 (156)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l   79 (156)
                      ++++.+.....+..+...    +.....+.+.+.||+|+||.||++.... +..+|+|.+.......   ..+.+|+.++
T Consensus         6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l   85 (496)
T PTZ00283          6 DAMIGRVCRTFPDTFAKDEATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCL   85 (496)
T ss_pred             HHHHhhhccccccccCCCcccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHH
Confidence            455555544444333221    1122344566899999999999998654 8899999986543222   4577899999


Q ss_pred             cCCCCCCccccceeeecc------------eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 047548           80 SGTSHVNIVTPLGICCEG------------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV  147 (156)
Q Consensus        80 ~~l~~~~i~~l~~~~~~~------------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~  147 (156)
                      ..+.|++++++...+...            +++||+++|+|.+++......   ...+++..+..++.|++.||.|||++
T Consensus        86 ~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~---~~~l~e~~~~~i~~qll~aL~~lH~~  162 (496)
T PTZ00283         86 LNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKT---NRTFREHEAGLLFIQVLLAVHHVHSK  162 (496)
T ss_pred             hcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999877654321            889999999999999753211   34578889999999999999999999


Q ss_pred             CCCCcccc
Q 047548          148 ATLGLCIS  155 (156)
Q Consensus       148 ~~~h~~i~  155 (156)
                      +++|+||.
T Consensus       163 ~IiHrDLK  170 (496)
T PTZ00283        163 HMIHRDIK  170 (496)
T ss_pred             CEecCCCC
Confidence            99999984

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.67  E-value=1.3e-15  Score=111.39  Aligned_cols=114  Identities=24%  Similarity=0.320  Sum_probs=94.1

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc---------eee
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG---------LVY  100 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---------lv~  100 (156)
                      +.+.||+|+||.||++.... +..+|+|.+......   .+.+.+|+.++..++|+|++++.+.+...         +++
T Consensus         4 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~   83 (372)
T cd07853           4 PDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVT   83 (372)
T ss_pred             ccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEe
Confidence            45689999999999998754 889999988653222   25688999999999999999998876542         889


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+. ++|.+.+..       ...++...+..++.|++.||.|||+++++|+||.
T Consensus        84 e~~~-~~l~~~~~~-------~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlk  130 (372)
T cd07853          84 ELMQ-SDLHKIIVS-------PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIK  130 (372)
T ss_pred             eccc-cCHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence            9986 588887754       3347889999999999999999999999999984

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.67  E-value=1.3e-15  Score=108.51  Aligned_cols=131  Identities=21%  Similarity=0.353  Sum_probs=102.9

Q ss_pred             HHHHhhhhhhhhccccccCceEEEEEeCC--------CcEEEEEecccCCCC--hHHHHHHHHHHcCC-CCCCcccccee
Q 047548           25 SDVKKMTNSFSDKVRQGGYGVVYRGKLHE--------GRVAAVKVLSESMGN--GEEFINEVACISGT-SHVNIVTPLGI   93 (156)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~--------~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~l~~~   93 (156)
                      .++......+.+.||+|+||.||.+....        ...+++|.+......  ...+..|+.++..+ +|+|++++.+.
T Consensus        13 ~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~   92 (307)
T cd05098          13 WEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA   92 (307)
T ss_pred             ceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence            34445566778899999999999987532        246899988754322  24678899999998 79999999998


Q ss_pred             eecc----eeeecCCCCChHHHhhhcCCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           94 CCEG----LVYEFMSNGSLHKFIYDKGSMS---------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        94 ~~~~----lv~e~~~~g~L~~~l~~~~~~~---------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +...    +++||+++++|.+++.......         .....+++..++.++.|++.||+|||+++++|+||.
T Consensus        93 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlk  167 (307)
T cd05098          93 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLA  167 (307)
T ss_pred             EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCccccccc
Confidence            8776    9999999999999997643110         012347788899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.67  E-value=1.1e-15  Score=107.47  Aligned_cols=116  Identities=18%  Similarity=0.291  Sum_probs=96.9

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .+...+|+|++|.||++.... +..+++|.+.....   ..+.+.+|+.++..+.|+|++++.+.+...    +++||++
T Consensus         4 ~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~   83 (286)
T cd07847           4 EKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCD   83 (286)
T ss_pred             eeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccC
Confidence            345689999999999999765 88999998864321   224578899999999999999999988776    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++.+..++..       ...+++..+..++.|++.||.|||+++++|+|+.
T Consensus        84 ~~~l~~~~~~-------~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~  127 (286)
T cd07847          84 HTVLNELEKN-------PRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVK  127 (286)
T ss_pred             ccHHHHHHhC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence            9888777654       2347889999999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.67  E-value=1.3e-15  Score=107.79  Aligned_cols=124  Identities=27%  Similarity=0.449  Sum_probs=98.9

Q ss_pred             hhhhhccccccCceEEEEEeCC-----------------CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccce
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-----------------GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLG   92 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-----------------~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~   92 (156)
                      ..+.+.||+|+||.||.+....                 +..+++|.+......  .+.+.+|+.++..++|+|++++.+
T Consensus         7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~   86 (296)
T cd05051           7 LNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLG   86 (296)
T ss_pred             CcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence            3456789999999999987542                 245788988754322  256889999999999999999999


Q ss_pred             eeecc----eeeecCCCCChHHHhhhcCCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           93 ICCEG----LVYEFMSNGSLHKFIYDKGSMS----TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        93 ~~~~~----lv~e~~~~g~L~~~l~~~~~~~----~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+...    +++|++++++|.+++.......    .....+++..+..++.|++.||.|||+++++|+||.
T Consensus        87 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlk  157 (296)
T cd05051          87 VCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLA  157 (296)
T ss_pred             EEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccc
Confidence            88775    9999999999999997643100    012257889999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.67  E-value=2e-15  Score=105.54  Aligned_cols=122  Identities=27%  Similarity=0.481  Sum_probs=97.3

Q ss_pred             hhhhccccccCceEEEEEeCC----CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc--------
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG--------   97 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~--------   97 (156)
                      .+.+.+|+|+||.||.+....    +..+|+|.+.......   ..+.+|+..+..++|+|++++.+.+...        
T Consensus         2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   81 (273)
T cd05035           2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK   81 (273)
T ss_pred             ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence            356789999999999998643    4679999887543222   4688999999999999999999876432        


Q ss_pred             --eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 --LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 --lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                        +++||+++++|..++...... .....+++.....++.|++.||.|||++++.|+|+.
T Consensus        82 ~~~v~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlk  140 (273)
T cd05035          82 PMVILPFMKHGDLHSFLLYSRLG-GLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLA  140 (273)
T ss_pred             cEEEEeccCCCCHHHHHHHhhcc-CCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence              889999999999998653211 113457888999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.67  E-value=1.9e-15  Score=107.35  Aligned_cols=116  Identities=22%  Similarity=0.310  Sum_probs=98.4

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC-ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      ..+.+.||+|++|.||++.... +..+++|.+..... ..+.+.+|+.+++.++|+|++++.+.+...    +++||+++
T Consensus        21 y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~  100 (297)
T cd06656          21 YTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG  100 (297)
T ss_pred             ceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCC
Confidence            3455789999999999998654 88999998865332 235678899999999999999999988766    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++..        ..++...+..++.|++.||.|||+.+++|+|+.
T Consensus       101 ~~L~~~~~~--------~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~  142 (297)
T cd06656         101 GSLTDVVTE--------TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIK  142 (297)
T ss_pred             CCHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            999999864        236788999999999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.67  E-value=1.6e-15  Score=107.85  Aligned_cols=130  Identities=20%  Similarity=0.392  Sum_probs=101.4

Q ss_pred             HHHhhhhhhhhccccccCceEEEEEeC--------CCcEEEEEecccCCC--ChHHHHHHHHHHcCC-CCCCccccceee
Q 047548           26 DVKKMTNSFSDKVRQGGYGVVYRGKLH--------EGRVAAVKVLSESMG--NGEEFINEVACISGT-SHVNIVTPLGIC   94 (156)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~g~v~~~~~~--------~~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~l~~~~   94 (156)
                      ++......+.+.||+|+||.||.+...        .+..+++|.+.....  ..+.+.+|+.++..+ .|+|++++.+.+
T Consensus        11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~   90 (304)
T cd05101          11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC   90 (304)
T ss_pred             cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence            344455567789999999999999742        134788998865322  225688999999999 899999999988


Q ss_pred             ecc----eeeecCCCCChHHHhhhcCCCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           95 CEG----LVYEFMSNGSLHKFIYDKGSMST---------KNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        95 ~~~----lv~e~~~~g~L~~~l~~~~~~~~---------~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ...    +++||+++++|.+++......+.         ....++...+..++.|++.||.|||+++++|+||.
T Consensus        91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlk  164 (304)
T cd05101          91 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLA  164 (304)
T ss_pred             ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence            776    99999999999999976432110         02346778889999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.67  E-value=1.6e-15  Score=104.94  Aligned_cols=114  Identities=29%  Similarity=0.516  Sum_probs=97.6

Q ss_pred             hccccccCceEEEEEeCCCcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCChH
Q 047548           36 DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLH  109 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L~  109 (156)
                      +.||+|+||.||++....+..+++|.+......  ...+..|+.++..+.|++++++.+.+...    +++||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            368999999999999766889999988754332  25688999999999999999999888776    999999999999


Q ss_pred             HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          110 KFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       110 ~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++...      ...++......++.+++.++.|||++++.|+||.
T Consensus        81 ~~l~~~------~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~  120 (251)
T cd05041          81 TFLRKK------KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLA  120 (251)
T ss_pred             HHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcC
Confidence            998654      2346788889999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.67  E-value=1.3e-15  Score=107.56  Aligned_cols=116  Identities=24%  Similarity=0.353  Sum_probs=96.9

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      .+.+.||+|++|.||++..+. +..+++|.+......  ...+.+|+.+++.++|+|++++.+.+...    +++||+++
T Consensus         8 ~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   87 (291)
T cd07844           8 KKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT   87 (291)
T ss_pred             eEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCC
Confidence            345689999999999998764 789999998653222  24567899999999999999999988776    99999985


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       +|.+++...      ...+++.....++.|++.||.|||+++++|+|+.
T Consensus        88 -~L~~~~~~~------~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~  130 (291)
T cd07844          88 -DLKQYMDDC------GGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLK  130 (291)
T ss_pred             -CHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCC
Confidence             899988754      2347888899999999999999999999999985

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.67  E-value=1.4e-15  Score=107.26  Aligned_cols=124  Identities=27%  Similarity=0.427  Sum_probs=98.5

Q ss_pred             hhhhhccccccCceEEEEEeC------CCcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----ee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LV   99 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~------~~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv   99 (156)
                      ..+.+.||+|+||.||++...      .+..+++|.+......  .+.+.+|+.++..+.|+|++++.+.+...    ++
T Consensus         7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv   86 (288)
T cd05050           7 IEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLL   86 (288)
T ss_pred             ceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEE
Confidence            345578999999999999853      2578899988754322  24688899999999999999999988775    99


Q ss_pred             eecCCCCChHHHhhhcCCCC---------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMS---------------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~---------------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++++|.+++.......               .....+++..++.++.|++.||.|||++++.|+|+.
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~  157 (288)
T cd05050          87 FEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLA  157 (288)
T ss_pred             EecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence            99999999999997432100               001236778889999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.67  E-value=9.4e-16  Score=121.14  Aligned_cols=123  Identities=17%  Similarity=0.262  Sum_probs=98.7

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC----hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN----GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.+.||+|+||.||++.... +..||+|.+......    .+.+.+|+.++..+.|+|++++.+.+...    ++|||+
T Consensus         5 eIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~   84 (932)
T PRK13184          5 DIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYI   84 (932)
T ss_pred             EEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcC
Confidence            345689999999999998765 889999998753222    24688999999999999999999988776    999999


Q ss_pred             CCCChHHHhhhcCCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMS----TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~----~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++.......    ......+...++.++.|++.||.|||+++++|+||.
T Consensus        85 eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLK  140 (932)
T PRK13184         85 EGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLK  140 (932)
T ss_pred             CCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCc
Confidence            9999999986421100    012234567788999999999999999999999984

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.67  E-value=2.7e-15  Score=105.61  Aligned_cols=125  Identities=27%  Similarity=0.445  Sum_probs=98.4

Q ss_pred             hhhhhhccccccCceEEEEEeCC------CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----e
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----L   98 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----l   98 (156)
                      ...+.+.||+|+||.||++....      +..+|+|.+.......  ..+..|+.++..++|+|++++.+.+...    +
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~   85 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM   85 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence            34566789999999999998532      4689999987543222  4578899999999999999999988775    8


Q ss_pred             eeecCCCCChHHHhhhcCCCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMST---------KNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~---------~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++||+++++|.+++........         ....+++..+..++.|++.||.|||++++.|+||.
T Consensus        86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlk  151 (283)
T cd05091          86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLA  151 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccc
Confidence            9999999999999853211000         02246778889999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.66  E-value=1.3e-15  Score=105.53  Aligned_cols=118  Identities=22%  Similarity=0.270  Sum_probs=99.4

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCC---CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM---GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .+.+.+|+|+||.||++.... +..+++|.+....   .....+.+|+.+++.++|+|++++.+.+...    +++||++
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (257)
T cd08225           3 EIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCD   82 (257)
T ss_pred             eEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCC
Confidence            345689999999999999765 7889999986532   2235678999999999999999999988766    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++....     ...+++.....++.|++.||.|||+.++.|+|+.
T Consensus        83 ~~~L~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~  128 (257)
T cd08225          83 GGDLMKRINRQR-----GVLFSEDQILSWFVQISLGLKHIHDRKILHRDIK  128 (257)
T ss_pred             CCcHHHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCC
Confidence            999999987532     2346889999999999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.66  E-value=7.8e-16  Score=106.92  Aligned_cols=116  Identities=16%  Similarity=0.190  Sum_probs=98.7

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.+.+|+|+||.||++.... +..+++|.+.....    ..+.+.+|+..+..++|+|++++.+.+...    +++||+
T Consensus         3 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   82 (258)
T cd05578           3 ELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLL   82 (258)
T ss_pred             eEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCC
Confidence            345689999999999999765 88899998875321    225788999999999999999998887766    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+++|.+++...       ..++...+..++.|++.||.|||+++++|.|+.
T Consensus        83 ~~~~L~~~l~~~-------~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~  127 (258)
T cd05578          83 LGGDLRYHLSQK-------VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIK  127 (258)
T ss_pred             CCCCHHHHHHhc-------CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence            999999998753       247788999999999999999999999999875

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.66  E-value=1.8e-15  Score=105.27  Aligned_cols=111  Identities=19%  Similarity=0.213  Sum_probs=95.6

Q ss_pred             cccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCCh
Q 047548           38 VRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSL  108 (156)
Q Consensus        38 lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L  108 (156)
                      ||.|++|.||.+.... +..+++|.+.....    ..+.+.+|+.+++.++|+|++++.+.+...    +++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            6899999999999865 88999999875332    225688999999999999999999988766    99999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+++.+.       ..++...+..++.|++.||.|||+.+++|.|+.
T Consensus        81 ~~~l~~~-------~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~  120 (262)
T cd05572          81 WTILRDR-------GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLK  120 (262)
T ss_pred             HHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Confidence            9999753       337888899999999999999999999999985

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.66  E-value=2e-15  Score=104.71  Aligned_cols=115  Identities=24%  Similarity=0.332  Sum_probs=96.9

Q ss_pred             hccccccCceEEEEEeCC----CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc---eeeecCCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG---LVYEFMSNG  106 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~~~~g  106 (156)
                      +.+|+|++|.||++.+..    ...+++|.+.....  ..+.+..|+.+++.++|+|++++.+.+...   +++||++++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLG   80 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCC
Confidence            368999999999998643    23689999876544  236788999999999999999999887665   999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++....     ...+++..+..++.|++.||.|||++++.|.||.
T Consensus        81 ~L~~~l~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~  124 (257)
T cd05040          81 SLLDRLRKDA-----LGHFLISTLCDYAVQIANGMRYLESKRFIHRDLA  124 (257)
T ss_pred             cHHHHHHhcc-----cccCcHHHHHHHHHHHHHHHHHHHhCCccccccC
Confidence            9999997642     1357889999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.66  E-value=1.4e-15  Score=107.83  Aligned_cols=125  Identities=22%  Similarity=0.422  Sum_probs=98.3

Q ss_pred             hhhhhhccccccCceEEEEEeC-----------------CCcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccc
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLH-----------------EGRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPL   91 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~-----------------~~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~   91 (156)
                      ...+.+.||+|+||.||.+...                 ....+++|.+......  ...+.+|+.++..++|+|++++.
T Consensus         6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~   85 (296)
T cd05095           6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLL   85 (296)
T ss_pred             hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence            3456678999999999987532                 1346888988754322  25688999999999999999999


Q ss_pred             eeeecc----eeeecCCCCChHHHhhhcCCCCC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           92 GICCEG----LVYEFMSNGSLHKFIYDKGSMST----KNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        92 ~~~~~~----lv~e~~~~g~L~~~l~~~~~~~~----~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +.+...    +++||+++++|.+++........    ....+++..+..++.|++.|+.|||+.+++|+|+.
T Consensus        86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlk  157 (296)
T cd05095          86 AVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLA  157 (296)
T ss_pred             EEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCC
Confidence            988775    99999999999999876431110    12346678899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.66  E-value=1.2e-15  Score=106.81  Aligned_cols=115  Identities=23%  Similarity=0.297  Sum_probs=95.7

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC---C--------hHHHHHHHHHHcCCCCCCccccceeeecc----
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---N--------GEEFINEVACISGTSHVNIVTPLGICCEG----   97 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~--------~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----   97 (156)
                      ..+.||+|++|.||++.... +..+++|.+.....   .        .+.+..|+.++..++|+|++++.+.+...    
T Consensus         5 ~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (272)
T cd06629           5 KGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLS   84 (272)
T ss_pred             ecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceE
Confidence            34689999999999998654 88899998753211   0        13467899999999999999999988776    


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++||+++++|.+++...       ..++...+..++.|++.||.|||+++++|+|+.
T Consensus        85 lv~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~  135 (272)
T cd06629          85 IFLEYVPGGSIGSCLRTY-------GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLK  135 (272)
T ss_pred             EEEecCCCCcHHHHHhhc-------cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCC
Confidence            899999999999998763       347788889999999999999999999999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.66  E-value=1.4e-15  Score=107.13  Aligned_cols=119  Identities=22%  Similarity=0.288  Sum_probs=98.7

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      .+.+.||+|+||.||++.... +..+++|.+......  ...+.+|+.++..+.|+|++++.+.+...    +++||+++
T Consensus         4 ~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (286)
T cd06622           4 EVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDA   83 (286)
T ss_pred             hhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCC
Confidence            456789999999999999764 889999988653222  25688999999999999999999987766    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA-VATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~-~~~~h~~i~  155 (156)
                      ++|.+++.....    ...+++..+..++.|++.||.|||+ .+++|+||.
T Consensus        84 ~~l~~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~  130 (286)
T cd06622          84 GSLDKLYAGGVA----TEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVK  130 (286)
T ss_pred             CCHHHHHHhccc----cCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCC
Confidence            999998865311    2357899999999999999999997 489999975

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.66  E-value=1.6e-15  Score=105.01  Aligned_cols=117  Identities=31%  Similarity=0.529  Sum_probs=99.5

Q ss_pred             hhhccccccCceEEEEEeCC-C----cEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-G----RVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~----~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      +.+.+|.|+||.||.+.... +    ..+++|.+.....  ..+.+..|+..+..++|++++++.+.+...    +++||
T Consensus         3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~   82 (258)
T smart00219        3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEY   82 (258)
T ss_pred             ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEec
Confidence            45689999999999998764 3    7899999976543  346788999999999999999999988875    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++....     ...+++..+..++.|++.|+.|||+.++.|+|+.
T Consensus        83 ~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~  130 (258)
T smart00219       83 MEGGDLLDYLRKNR-----PKELSLSDLLSFALQIARGMEYLESKNFIHRDLA  130 (258)
T ss_pred             cCCCCHHHHHHhhh-----hccCCHHHHHHHHHHHHHHHHHHhcCCeeecccc
Confidence            99999999987542     1127899999999999999999999999999985

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.66  E-value=1.3e-15  Score=107.25  Aligned_cols=120  Identities=25%  Similarity=0.349  Sum_probs=97.0

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCC-CCCCccccceeeec-----c----eeee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGT-SHVNIVTPLGICCE-----G----LVYE  101 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~-----~----lv~e  101 (156)
                      .+.+.||+|+||.||++.... +..+++|.+.........+..|+.++..+ +|+|++++.+.+..     .    +++|
T Consensus        21 ~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e  100 (286)
T cd06638          21 EIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLE  100 (286)
T ss_pred             eeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEe
Confidence            445789999999999998765 78899998765433345678899999888 69999999987631     1    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++++|.+++.....   ....+++..+..++.|++.||.|||++.+.|+|+.
T Consensus       101 ~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk  151 (286)
T cd06638         101 LCNGGSVTDLVKGFLK---RGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVK  151 (286)
T ss_pred             ecCCCCHHHHHHHhhc---cCccccHHHHHHHHHHHHHHHHHHHhCCccccCCC
Confidence            9999999998864211   03447788899999999999999999999999974

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.66  E-value=2.4e-15  Score=106.18  Aligned_cols=118  Identities=19%  Similarity=0.282  Sum_probs=97.4

Q ss_pred             hhccccccCceEEEEEeCC-CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc------eeeecCCC
Q 047548           35 SDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG------LVYEFMSN  105 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv~e~~~~  105 (156)
                      .+.||.|.+|.||.+.... +..+++|.+.....  ....+.+|+.+++.++|+|++++.+.+...      +++||+++
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~   85 (287)
T cd06621           6 LSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEG   85 (287)
T ss_pred             EEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCC
Confidence            4579999999999999765 78899998875432  225688999999999999999999887542      89999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++.....   ....++...+..++.|++.||.|||+.+++|.|+.
T Consensus        86 ~~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~  132 (287)
T cd06621          86 GSLDSIYKKVKK---RGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIK  132 (287)
T ss_pred             CCHHHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            999988764211   13447888999999999999999999999999985

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.66  E-value=2e-15  Score=107.91  Aligned_cols=117  Identities=18%  Similarity=0.180  Sum_probs=99.5

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCC----hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN----GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      +.+.||+|++|.||.+.... +..+++|.+......    .+.+..|+.++..+.|++++++.+.+...    +++||+.
T Consensus         5 ~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   84 (316)
T cd05574           5 KIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCP   84 (316)
T ss_pred             EeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecC
Confidence            44679999999999999765 889999998764322    24688899999999999999999888776    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++....     ...+++.....++.|++.||.|||+.++.|+||.
T Consensus        85 ~~~L~~~~~~~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  130 (316)
T cd05574          85 GGELFRLLQRQP-----GKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLK  130 (316)
T ss_pred             CCCHHHHHHhCC-----CCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence            999999987532     3457888999999999999999999999999985

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.66  E-value=1.6e-15  Score=107.92  Aligned_cols=115  Identities=15%  Similarity=0.141  Sum_probs=97.6

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      +.+.+|+|+||.||++.... +..+++|.+.....    ....+..|+.++..++|+|++++++.+...    +++||++
T Consensus         5 ~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   84 (305)
T cd05609           5 TIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVE   84 (305)
T ss_pred             EeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCC
Confidence            45689999999999998765 78899998875422    124577899999999999999999888766    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++...       ..+++..+..++.|++.||.|||++++.|+|+.
T Consensus        85 g~~L~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~  128 (305)
T cd05609          85 GGDCATLLKNI-------GALPVDMARMYFAETVLALEYLHNYGIVHRDLK  128 (305)
T ss_pred             CCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCc
Confidence            99999999653       347888889999999999999999999999985

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.66  E-value=1.8e-15  Score=105.56  Aligned_cols=116  Identities=20%  Similarity=0.209  Sum_probs=95.9

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---C---hHHHHHHHHHHcCCCCCCccccceeeecc------ee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---N---GEEFINEVACISGTSHVNIVTPLGICCEG------LV   99 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv   99 (156)
                      .+.+.+|+|+||.||.+.... +..+++|.+.....   .   .+.+.+|+.++..+.|+|++++.+.+...      ++
T Consensus         5 ~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v   84 (265)
T cd06652           5 RLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIF   84 (265)
T ss_pred             eEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEE
Confidence            345789999999999998765 88999998753211   1   14678899999999999999999987652      78


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++++|.+++...       ..++......++.|++.||.|||+.+++|.||.
T Consensus        85 ~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~  133 (265)
T cd06652          85 MEHMPGGSIKDQLKSY-------GALTENVTRKYTRQILEGVSYLHSNMIVHRDIK  133 (265)
T ss_pred             EEecCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence            9999999999998753       236778889999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.66  E-value=2.1e-15  Score=108.69  Aligned_cols=132  Identities=20%  Similarity=0.360  Sum_probs=102.7

Q ss_pred             hHHHHhhhhhhhhccccccCceEEEEEeCC--------CcEEEEEecccCCCC--hHHHHHHHHHHcCC-CCCCccccce
Q 047548           24 YSDVKKMTNSFSDKVRQGGYGVVYRGKLHE--------GRVAAVKVLSESMGN--GEEFINEVACISGT-SHVNIVTPLG   92 (156)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~--------~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~l~~   92 (156)
                      .+++......+.+.||+|+||.||.+....        ...+++|.+......  .+.+.+|+.++..+ .|+|++++.+
T Consensus         6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~   85 (334)
T cd05100           6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLG   85 (334)
T ss_pred             ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence            345555566778899999999999997421        236889987753322  25688999999999 8999999999


Q ss_pred             eeecc----eeeecCCCCChHHHhhhcCCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           93 ICCEG----LVYEFMSNGSLHKFIYDKGSMS---------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        93 ~~~~~----lv~e~~~~g~L~~~l~~~~~~~---------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+...    +++||+++|+|.+++.......         .....+++..+..++.|++.||.|||+++++|+||.
T Consensus        86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlk  161 (334)
T cd05100          86 ACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLA  161 (334)
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence            88766    8999999999999997532110         012346778889999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.66  E-value=1.2e-15  Score=107.44  Aligned_cols=115  Identities=23%  Similarity=0.340  Sum_probs=96.9

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.||+|+||.||++.... +..+++|.+......   .+.+.+|+.++..+.|+|++++.+.+...    +++||+++
T Consensus         5 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   84 (286)
T cd07846           5 NLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDH   84 (286)
T ss_pred             EeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCc
Confidence            45689999999999999865 889999987653222   24678899999999999999999998776    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +.+..+....       ..+++..+..++.|++.||+|||+.++.|.|+.
T Consensus        85 ~~l~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~  127 (286)
T cd07846          85 TVLDDLEKYP-------NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIK  127 (286)
T ss_pred             cHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence            8888776542       237889999999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.66  E-value=2.7e-15  Score=105.38  Aligned_cols=117  Identities=23%  Similarity=0.428  Sum_probs=99.1

Q ss_pred             hhhhccccccCceEEEEEeC-----CCcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeec--c----ee
Q 047548           33 SFSDKVRQGGYGVVYRGKLH-----EGRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCE--G----LV   99 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~-----~~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~--~----lv   99 (156)
                      .+.+.+|+|+||.||++.+.     .+..+|+|.+......  .+.+.+|+..+..+.|+|++++.+++..  .    ++
T Consensus         7 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv   86 (284)
T cd05038           7 KFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLI   86 (284)
T ss_pred             hhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEE
Confidence            34568999999999999853     2678999998765443  4678999999999999999999988766  2    99


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++++|.+++...      ...+++..+..++.|++.||.|||++++.|+|+.
T Consensus        87 ~e~~~~~~l~~~l~~~------~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~  136 (284)
T cd05038          87 MEYLPSGSLRDYLQRH------RDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLA  136 (284)
T ss_pred             EecCCCCCHHHHHHhC------ccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            9999999999999754      2247889999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.66  E-value=2.1e-15  Score=106.06  Aligned_cols=111  Identities=23%  Similarity=0.352  Sum_probs=93.1

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      +.++||+|+||.||++.... +..+++|.+......  .+.+.+|+.++..+.|+|++++.+.+...    +++||++++
T Consensus         5 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   84 (279)
T cd06619           5 YQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGG   84 (279)
T ss_pred             heeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCC
Confidence            45689999999999998654 788999988643222  25688999999999999999999988776    899999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|..+.           .+++..+..++.|++.||.|||+.+++|.|+.
T Consensus        85 ~l~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  122 (279)
T cd06619          85 SLDVYR-----------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVK  122 (279)
T ss_pred             ChHHhh-----------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCC
Confidence            886532           25678888999999999999999999999975

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.66  E-value=2.3e-15  Score=105.93  Aligned_cols=120  Identities=29%  Similarity=0.401  Sum_probs=98.3

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCC-CCCCccccceeeec-------c---e
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGT-SHVNIVTPLGICCE-------G---L   98 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~-------~---l   98 (156)
                      ...+.+.+|+|+||.||++.... +..+++|...........+..|+.++..+ .|+|++++.+.+..       .   +
T Consensus        17 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~i   96 (282)
T cd06636          17 IFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWL   96 (282)
T ss_pred             hhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEE
Confidence            34555789999999999999755 78899998765443445678888888888 79999999888742       1   9


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++||+++++|.+++....     ...+++..+..++.|++.||.|||+++++|.|+.
T Consensus        97 v~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~  148 (282)
T cd06636          97 VMEFCGAGSVTDLVKNTK-----GNALKEDWIAYICREILRGLAHLHAHKVIHRDIK  148 (282)
T ss_pred             EEEeCCCCcHHHHHHHcc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            999999999999987543     3346788889999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.66  E-value=1.8e-15  Score=104.87  Aligned_cols=117  Identities=26%  Similarity=0.458  Sum_probs=98.1

Q ss_pred             hhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc---eeeecCCCCCh
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG---LVYEFMSNGSL  108 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~~~~g~L  108 (156)
                      ..+.+.||+|+||.||.+.. .+..+++|.+.... ....+.+|+.++..++|+|++++.+.+...   +++||+++++|
T Consensus         8 ~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~~L   85 (254)
T cd05083           8 LTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKGNL   85 (254)
T ss_pred             ceeeeeeccCCCCceEeccc-CCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCCCH
Confidence            34567899999999999864 46778999876432 346788999999999999999999887766   99999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+++....     ...++...+..++.|++.|+.|||+.++.|+|+.
T Consensus        86 ~~~l~~~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~  127 (254)
T cd05083          86 VNFLRTRG-----RALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLA  127 (254)
T ss_pred             HHHHHhcC-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccC
Confidence            99997642     3347788899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.66  E-value=1.6e-15  Score=105.38  Aligned_cols=111  Identities=19%  Similarity=0.277  Sum_probs=95.8

Q ss_pred             cccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCCh
Q 047548           38 VRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSL  108 (156)
Q Consensus        38 lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L  108 (156)
                      +|+|+||.||.+.... +..+++|.+.....    ..+.+.+|+.++..+.|+|++++.+.+...    +++||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            5899999999999876 88999999875432    225688899999999999999998887765    89999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+++...       ..+++..+..++.|++.||.|||++++.|+||.
T Consensus        81 ~~~l~~~-------~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~  120 (265)
T cd05579          81 ASLLENV-------GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLK  120 (265)
T ss_pred             HHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCC
Confidence            9998763       247889999999999999999999999999985

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.66  E-value=3.1e-15  Score=106.94  Aligned_cols=119  Identities=20%  Similarity=0.270  Sum_probs=93.0

Q ss_pred             hhccccccCceEEEEEeCC---CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc------eeeecCCC
Q 047548           35 SDKVRQGGYGVVYRGKLHE---GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG------LVYEFMSN  105 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~---~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv~e~~~~  105 (156)
                      +.+||+|+||.||++...+   +..+|+|.+.... ......+|+.++..++|+|++++.+.+...      +++||+.+
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH   84 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence            3579999999999998643   5789999886432 234578899999999999999999887543      78898854


Q ss_pred             CChHHHhhhcCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMST--KNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~--~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       +|.+++........  ....++...+..++.|++.||.|||+++++|+||.
T Consensus        85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlk  135 (317)
T cd07868          85 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLK  135 (317)
T ss_pred             -CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCC
Confidence             88888754221000  12247788899999999999999999999999984

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.66  E-value=2.1e-15  Score=106.66  Aligned_cols=127  Identities=21%  Similarity=0.400  Sum_probs=99.8

Q ss_pred             hhhhhhhhccccccCceEEEEEeCC------CcEEEEEecccCCCCh--HHHHHHHHHHcCC-CCCCccccceeeecc--
Q 047548           29 KMTNSFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGNG--EEFINEVACISGT-SHVNIVTPLGICCEG--   97 (156)
Q Consensus        29 ~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l-~~~~i~~l~~~~~~~--   97 (156)
                      .....+.+.||+|+||.||++....      ...+++|.+.......  ..+.+|+.++..+ +|+|++++.+.+...  
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~   90 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP   90 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence            3344556789999999999998642      3678999887543222  4578899999999 899999999988776  


Q ss_pred             --eeeecCCCCChHHHhhhcCCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 --LVYEFMSNGSLHKFIYDKGSMS---------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 --lv~e~~~~g~L~~~l~~~~~~~---------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                        +++||+++|+|..++.......         .....+++..++.++.|++.||.|||+++++|+|+.
T Consensus        91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlk  159 (293)
T cd05053          91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLA  159 (293)
T ss_pred             eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccc
Confidence              8999999999999996532100         013457788999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.65  E-value=2e-15  Score=107.00  Aligned_cols=113  Identities=24%  Similarity=0.336  Sum_probs=95.6

Q ss_pred             hhccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCCh
Q 047548           35 SDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSL  108 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L  108 (156)
                      ...||+|+||.||++.... +..+++|.+...... .+.+.+|+..+..++|+|++++.+.+...    +++||+++++|
T Consensus        27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L  106 (292)
T cd06658          27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL  106 (292)
T ss_pred             hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence            4578999999999998654 788999987643322 25688999999999999999999887765    99999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+++..        ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       107 ~~~~~~--------~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlk  145 (292)
T cd06658         107 TDIVTH--------TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIK  145 (292)
T ss_pred             HHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCC
Confidence            998753        236788899999999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.65  E-value=3.3e-15  Score=104.28  Aligned_cols=116  Identities=19%  Similarity=0.203  Sum_probs=95.8

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---C---hHHHHHHHHHHcCCCCCCccccceeeecc------ee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---N---GEEFINEVACISGTSHVNIVTPLGICCEG------LV   99 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv   99 (156)
                      ...+.+|+|+||.||++.... +..+++|.+.....   .   ...+.+|+.++..++|+|++++.+.+...      ++
T Consensus         5 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~   84 (266)
T cd06651           5 RRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIF   84 (266)
T ss_pred             cccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEE
Confidence            345789999999999998755 78899998764321   1   14578899999999999999999887642      78


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++++|.+++...       ..++......++.|++.||.|||+.++.|+|+.
T Consensus        85 ~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~  133 (266)
T cd06651          85 MEYMPGGSVKDQLKAY-------GALTESVTRKYTRQILEGMSYLHSNMIVHRDIK  133 (266)
T ss_pred             EeCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCC
Confidence            9999999999998753       336788888999999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.65  E-value=2.6e-15  Score=104.13  Aligned_cols=117  Identities=24%  Similarity=0.233  Sum_probs=97.7

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCC---CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM---GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.+|+|+||.+|.+.... +..+++|.+....   .....+.+|+.+++.++|+|++++.+.+...    +++||+++
T Consensus         4 ~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd08218           4 KVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEG   83 (256)
T ss_pred             EEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCC
Confidence            45689999999999998654 7889999886432   1225688999999999999999999988766    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++....     ....++.....++.|++.||.|||+++++|.|+.
T Consensus        84 ~~l~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~  128 (256)
T cd08218          84 GDLYKKINAQR-----GVLFPEDQILDWFVQICLALKHVHDRKILHRDIK  128 (256)
T ss_pred             CcHHHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence            99999886532     2346788889999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.65  E-value=4.5e-16  Score=117.07  Aligned_cols=113  Identities=19%  Similarity=0.207  Sum_probs=95.7

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      +..+||+|+||+|+.+..+. ++.+|+|+++...    .+-+....|-+++... +||.++.++..+.+.    ++|||+
T Consensus       372 ~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~  451 (694)
T KOG0694|consen  372 LLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYV  451 (694)
T ss_pred             EEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEec
Confidence            45799999999999999877 8899999998742    2225677788877776 699999999999887    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      .||++..+.+        ...++++.+..+++.++.||+|||+++++.+|+
T Consensus       452 ~Ggdm~~~~~--------~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDl  494 (694)
T KOG0694|consen  452 AGGDLMHHIH--------TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDL  494 (694)
T ss_pred             CCCcEEEEEe--------cccccHHHHHHHHHHHHHHHHHHHhcCceeeec
Confidence            9999555443        344899999999999999999999999999986

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.65  E-value=1.2e-15  Score=106.52  Aligned_cols=119  Identities=27%  Similarity=0.406  Sum_probs=95.5

Q ss_pred             ccccccCceEEEEEeCC-------CcEEEEEecccCC--CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           37 KVRQGGYGVVYRGKLHE-------GRVAAVKVLSESM--GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-------~~~~a~k~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+|+|+||.||.+...+       +..+++|.+....  .....+.+|+.+++.+.|+|++++.+.+...    +++||+
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM   81 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence            58999999999998643       2578888876433  2235688999999999999999999988765    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++............+++..+..++.|++.|+.|||+.++.|.|+.
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~  133 (269)
T cd05044          82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLA  133 (269)
T ss_pred             CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            9999999997532111113346788899999999999999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.65  E-value=2.9e-15  Score=105.35  Aligned_cols=117  Identities=22%  Similarity=0.369  Sum_probs=97.8

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      +.+.||+|++|.||++.... +..+++|.+......  ...+.+|+.++..++|+|++++.+.+...    +++||+++ 
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-   82 (284)
T cd07836           4 QLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-   82 (284)
T ss_pred             EeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-
Confidence            45689999999999999865 888999988754322  25677899999999999999999988876    99999985 


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++.....    ...+++..+..++.|++.||.|||+.++.|+|+.
T Consensus        83 ~l~~~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~  127 (284)
T cd07836          83 DLKKYMDTHGV----RGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLK  127 (284)
T ss_pred             cHHHHHHhcCC----CCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCC
Confidence            88888865421    2457889999999999999999999999999985

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.65  E-value=2.7e-15  Score=106.53  Aligned_cols=115  Identities=23%  Similarity=0.310  Sum_probs=97.9

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      .+.+.+|.|.+|.||++.... +..+++|.+...... ...+.+|+.+++.++|+|++++.+.+...    +++||++++
T Consensus        22 ~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  101 (296)
T cd06655          22 TRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGG  101 (296)
T ss_pred             EEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCC
Confidence            445689999999999998654 889999988653322 35678899999999999999999988765    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++..        ..+++..+..++.|++.||.|||+.++.|+|+.
T Consensus       102 ~L~~~~~~--------~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~  142 (296)
T cd06655         102 SLTDVVTE--------TCMDEAQIAAVCRECLQALEFLHANQVIHRDIK  142 (296)
T ss_pred             cHHHHHHh--------cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            99998864        237889999999999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.65  E-value=1.4e-15  Score=107.04  Aligned_cols=115  Identities=20%  Similarity=0.329  Sum_probs=95.7

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.||+|.||.||++.... +..+++|.+......   ...+.+|+.++..++|+|++++.+.+...    +++||+.+
T Consensus         4 ~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   83 (284)
T cd07839           4 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCDQ   83 (284)
T ss_pred             eEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCCC
Confidence            45679999999999999865 888999988643222   24577899999999999999999988776    89999974


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       +|.+++...      ...+++..+..++.|++.||.|||+.+++|+|+.
T Consensus        84 -~l~~~~~~~------~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~  126 (284)
T cd07839          84 -DLKKYFDSC------NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLK  126 (284)
T ss_pred             -CHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCC
Confidence             888887653      2347899999999999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.65  E-value=3.1e-15  Score=105.59  Aligned_cols=117  Identities=22%  Similarity=0.390  Sum_probs=91.1

Q ss_pred             hhhhccccccCceEEEEEeC-C-CcEEEEEecccCCCC---hHHHHHHHHHHcCC---CCCCccccceeeec-----c--
Q 047548           33 SFSDKVRQGGYGVVYRGKLH-E-GRVAAVKVLSESMGN---GEEFINEVACISGT---SHVNIVTPLGICCE-----G--   97 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~-~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l---~~~~i~~l~~~~~~-----~--   97 (156)
                      .+.+.||+|+||.||++... . +..+|+|.+......   .....+|+.++..+   .|+|++++.+.+..     .  
T Consensus         4 ~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~   83 (290)
T cd07862           4 ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETK   83 (290)
T ss_pred             ceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCc
Confidence            34568999999999999863 2 678999988653222   23456677766654   69999999988742     1  


Q ss_pred             --eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 --LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 --lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                        +++|++. ++|.+++....     ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        84 ~~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlk  137 (290)
T cd07862          84 LTLVFEHVD-QDLTTYLDKVP-----EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLK  137 (290)
T ss_pred             EEEEEccCC-CCHHHHHHhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCC
Confidence              8999996 58999886532     3347888999999999999999999999999984

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.65  E-value=3.1e-15  Score=103.77  Aligned_cols=118  Identities=22%  Similarity=0.209  Sum_probs=97.7

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc-----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG-----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----lv~e~~  103 (156)
                      .+.+.+|+|++|.||.+.... +..+++|.+.....   ..+.+..|+.+++.++|+|++++.+.+...     +++||+
T Consensus         3 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (257)
T cd08223           3 CFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFC   82 (257)
T ss_pred             eEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEeccc
Confidence            355789999999999998755 77899998864322   224678899999999999999998876532     899999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++....     ...+++..+..++.+++.|+.|||+.+++|+||.
T Consensus        83 ~~~~l~~~l~~~~-----~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~  129 (257)
T cd08223          83 EGGDLYHKLKEQK-----GKLLPENQVVEWFVQIAMALQYLHEKHILHRDLK  129 (257)
T ss_pred             CCCcHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence            9999999997532     3447889999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.65  E-value=1.6e-15  Score=113.14  Aligned_cols=117  Identities=17%  Similarity=0.257  Sum_probs=92.3

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc------------e
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG------------L   98 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------------l   98 (156)
                      ..+.+.||+|+||.||++.... +..+|+|.+...   .....+|+.++..++|+|++++.+++...            +
T Consensus        68 y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~---~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~l  144 (440)
T PTZ00036         68 YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD---PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNV  144 (440)
T ss_pred             EEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC---cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEE
Confidence            3456789999999999998765 889999987532   23345799999999999999987765321            6


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|||+++ ++.+++.....   ....+++..+..++.|++.||.|||+++++|+||.
T Consensus       145 vmE~~~~-~l~~~~~~~~~---~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLK  197 (440)
T PTZ00036        145 VMEFIPQ-TVHKYMKHYAR---NNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLK  197 (440)
T ss_pred             EEecCCc-cHHHHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcC
Confidence            9999975 78777754211   14458889999999999999999999999999984

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.65  E-value=2e-15  Score=109.17  Aligned_cols=115  Identities=19%  Similarity=0.256  Sum_probs=93.0

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----------
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----------   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------   97 (156)
                      +.+.+.||+|+||.||++.... +..+|+|.+.....   ..+.+.+|+.++..++|+|++++.+++...          
T Consensus        17 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   96 (343)
T cd07878          17 YQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVY   96 (343)
T ss_pred             hhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEE
Confidence            3455789999999999998754 78999998865322   224577899999999999999998776421          


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++++ +++|.+++..        ..++...+..++.|++.||.|||+++++|+||.
T Consensus        97 ~~~~~~-~~~l~~~~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdik  145 (343)
T cd07878          97 LVTNLM-GADLNNIVKC--------QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLK  145 (343)
T ss_pred             EEeecC-CCCHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCC
Confidence            677766 7789887753        347889999999999999999999999999985

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.65  E-value=2.5e-15  Score=109.39  Aligned_cols=112  Identities=14%  Similarity=0.174  Sum_probs=93.4

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      ..+.+.||+|+||.||++.... +..+++|.....     ....|+.++..++|+|++++++.+...    ++++++. +
T Consensus        68 y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~  141 (357)
T PHA03209         68 YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-S  141 (357)
T ss_pred             cEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-C
Confidence            3455789999999999999765 778999975432     235688899999999999999988776    8889885 5


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       142 ~l~~~l~~~------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk  184 (357)
T PHA03209        142 DLYTYLTKR------SRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVK  184 (357)
T ss_pred             cHHHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            898888654      3457889999999999999999999999999984

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=4.5e-15  Score=104.09  Aligned_cols=114  Identities=26%  Similarity=0.385  Sum_probs=95.9

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC--ChHHHHHHHHHHcCCC---CCCccccceeeecc----eeeecC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG--NGEEFINEVACISGTS---HVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~---~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      +.+.+|+|+||.||++.... +..+++|.+.....  ....+.+|+.++..+.   |+|++++.+.+...    +++||+
T Consensus         5 ~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06917           5 RLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYA   84 (277)
T ss_pred             hhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecC
Confidence            45689999999999999754 88999998865322  2356788888888886   99999999887765    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++..        ..+++.....++.|++.||.|||+.++.|+|+.
T Consensus        85 ~~~~L~~~~~~--------~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~  128 (277)
T cd06917          85 EGGSVRTLMKA--------GPIAEKYISVIIREVLVALKYIHKVGVIHRDIK  128 (277)
T ss_pred             CCCcHHHHHHc--------cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcC
Confidence            99999998864        247889999999999999999999999999985

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.65  E-value=2.9e-15  Score=105.39  Aligned_cols=125  Identities=24%  Similarity=0.454  Sum_probs=98.7

Q ss_pred             hhhhhhccccccCceEEEEEeC------CCcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc----ee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG----LV   99 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~------~~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv   99 (156)
                      ...+..+||+|+||.||.+...      .+..+++|.+...... ...+.+|+.++..++|+|++++.+.+...    ++
T Consensus         6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   85 (280)
T cd05092           6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMV   85 (280)
T ss_pred             hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEE
Confidence            3345678999999999998632      2557888887654322 25788999999999999999999888765    99


Q ss_pred             eecCCCCChHHHhhhcCCCC--------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMS--------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~--------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++++|.+++.......        .....+++..+..++.|++.|+.|||++++.|+|+.
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlk  149 (280)
T cd05092          86 FEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLA  149 (280)
T ss_pred             EecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence            99999999999997542100        001246788999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=4.6e-15  Score=103.94  Aligned_cols=115  Identities=23%  Similarity=0.324  Sum_probs=98.3

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      .+.+.+|.|++|.||++.... +..+++|.+.....  ....+.+|+.+++.++|+|++++.+.+...    +++||+++
T Consensus         4 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   83 (274)
T cd06609           4 TLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGG   83 (274)
T ss_pred             hhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCC
Confidence            345689999999999999765 88999998865321  225678899999999999999999988776    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++...        .+++..+..++.|++.|+.|||+.++.|+|+.
T Consensus        84 ~~L~~~~~~~--------~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~  125 (274)
T cd06609          84 GSCLDLLKPG--------KLDETYIAFILREVLLGLEYLHEEGKIHRDIK  125 (274)
T ss_pred             CcHHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            9999998642        47889999999999999999999999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.65  E-value=3.5e-15  Score=105.98  Aligned_cols=112  Identities=24%  Similarity=0.341  Sum_probs=95.3

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCC-ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCChH
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLH  109 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L~  109 (156)
                      ..||+|+||.||++.... +..+++|.+..... ..+.+.+|+..+..+.|+|++++.+.+...    +++||+++++|.
T Consensus        27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~  106 (297)
T cd06659          27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALT  106 (297)
T ss_pred             hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHH
Confidence            378999999999998754 88999999865332 235688899999999999999999887766    999999999999


Q ss_pred             HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          110 KFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       110 ~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++..        ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       107 ~~~~~--------~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~  144 (297)
T cd06659         107 DIVSQ--------TRLNEEQIATVCESVLQALCYLHSQGVIHRDIK  144 (297)
T ss_pred             HHHhh--------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            87753        237889999999999999999999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.64  E-value=3.9e-15  Score=103.66  Aligned_cols=117  Identities=22%  Similarity=0.354  Sum_probs=99.4

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      .+.+.||+|++|.||++..+. +..+++|.+......  ...+.+|+..++.+.|+|++++.+.+...    +++||+++
T Consensus         4 ~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (265)
T cd06605           4 EYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDG   83 (265)
T ss_pred             hHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCC
Confidence            345689999999999999865 888999988764322  25688999999999999999999888776    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA-VATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~-~~~~h~~i~  155 (156)
                      ++|.+++...      ...++...+..++.|++.+|.|||+ .+++|+|+.
T Consensus        84 ~~L~~~~~~~------~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~  128 (265)
T cd06605          84 GSLDKILKEV------QGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVK  128 (265)
T ss_pred             CcHHHHHHHc------cCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCC
Confidence            9999998764      2447888999999999999999999 999999975

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.64  E-value=3.1e-15  Score=108.86  Aligned_cols=114  Identities=21%  Similarity=0.261  Sum_probs=92.4

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----------
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----------   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------   97 (156)
                      +.+.+.||+|+||.||++.... +..+|+|.+.....   ....+.+|+.++..++|+|++++.+.+...          
T Consensus        23 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~  102 (359)
T cd07876          23 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVY  102 (359)
T ss_pred             eEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeE
Confidence            3455789999999999998755 88999999865322   225678899999999999999999876421          


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++||+.+ ++.+.+..         .++...+..++.|++.||.|||+++++|+||.
T Consensus       103 lv~e~~~~-~l~~~~~~---------~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlk  150 (359)
T cd07876         103 LVMELMDA-NLCQVIHM---------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK  150 (359)
T ss_pred             EEEeCCCc-CHHHHHhc---------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            89999975 67666632         26778888999999999999999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.64  E-value=3.8e-15  Score=105.69  Aligned_cols=123  Identities=25%  Similarity=0.436  Sum_probs=96.6

Q ss_pred             hhhhccccccCceEEEEEeCC-C--cEEEEEecccCCC--ChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeec
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-G--RVAAVKVLSESMG--NGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~--~~~a~k~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      .+.+.||+|+||.||++.... +  ..+++|.++....  ..+.+..|+.++..+ +|+|++++.+.+...    +++||
T Consensus         5 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~   84 (297)
T cd05089           5 KFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEY   84 (297)
T ss_pred             eeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEe
Confidence            456789999999999998754 3  3467787764221  225688899999888 799999999988765    99999


Q ss_pred             CCCCChHHHhhhcCCCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMST---------KNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~---------~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++........         ....+++..+..++.|++.|+.|||+++++|+||.
T Consensus        85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlk  146 (297)
T cd05089          85 APYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLA  146 (297)
T ss_pred             cCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCC
Confidence            999999999975321100         01347788999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.64  E-value=4.9e-15  Score=105.93  Aligned_cols=130  Identities=22%  Similarity=0.403  Sum_probs=101.1

Q ss_pred             HHHhhhhhhhhccccccCceEEEEEeC--------CCcEEEEEecccCCCCh--HHHHHHHHHHcCC-CCCCccccceee
Q 047548           26 DVKKMTNSFSDKVRQGGYGVVYRGKLH--------EGRVAAVKVLSESMGNG--EEFINEVACISGT-SHVNIVTPLGIC   94 (156)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~g~v~~~~~~--------~~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l-~~~~i~~l~~~~   94 (156)
                      +++.....+.+.||+|+||.||++...        ....+++|.+.......  ..+..|+.++..+ .|+|++++.+.+
T Consensus         8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~   87 (314)
T cd05099           8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVC   87 (314)
T ss_pred             cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence            344455567789999999999998742        14568889887533222  4678899999988 699999999988


Q ss_pred             ecc----eeeecCCCCChHHHhhhcCCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           95 CEG----LVYEFMSNGSLHKFIYDKGSMS---------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        95 ~~~----lv~e~~~~g~L~~~l~~~~~~~---------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ...    +++||+++|+|.+++.......         .....+++..+..++.|++.||.|||++++.|+|+.
T Consensus        88 ~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlk  161 (314)
T cd05099          88 TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLA  161 (314)
T ss_pred             ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence            765    8999999999999997532110         012347788889999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.64  E-value=3.3e-15  Score=105.50  Aligned_cols=123  Identities=24%  Similarity=0.471  Sum_probs=98.0

Q ss_pred             hhhhccccccCceEEEEEeC------CCcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           33 SFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~------~~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      .+.+.+|+|+||.||.+...      .+..+++|.+...... ...+.+|+.++..+.|++++++.+.+...    +++|
T Consensus         8 ~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   87 (288)
T cd05093           8 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFE   87 (288)
T ss_pred             eeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEE
Confidence            45578999999999999742      1456888887654322 35688999999999999999999988765    9999


Q ss_pred             cCCCCChHHHhhhcCCCC------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMS------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++++|.+++.......      .....+++..+..++.|++.+|.|||++++.|+|+.
T Consensus        88 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlk  147 (288)
T cd05093          88 YMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLA  147 (288)
T ss_pred             cCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccC
Confidence            999999999997532100      002247889999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.64  E-value=5.3e-15  Score=103.52  Aligned_cols=119  Identities=24%  Similarity=0.436  Sum_probs=94.8

Q ss_pred             ccccccCceEEEEEeCC-Cc--EEEEEecccCCC--ChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCCCC
Q 047548           37 KVRQGGYGVVYRGKLHE-GR--VAAVKVLSESMG--NGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-~~--~~a~k~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      .||+|+||.||++.... +.  .+++|.+.....  ..+.+..|+.++..+ +|+|++++.+.+...    +++||++++
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   81 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG   81 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence            68999999999998754 33  567887764321  225688899999999 899999999988776    999999999


Q ss_pred             ChHHHhhhcCCCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMST---------KNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~---------~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++........         ....+++..+..++.|++.|+.|||+++++|+||.
T Consensus        82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dik  139 (270)
T cd05047          82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLA  139 (270)
T ss_pred             cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccc
Confidence            99999975321100         02246788999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.64  E-value=3.9e-15  Score=105.52  Aligned_cols=117  Identities=24%  Similarity=0.323  Sum_probs=97.8

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC-ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      ...+.+.+|+|+||.||++.... +..+++|.+..... ..+.+.+|+.+++.++|+|++++.+.+...    +++||++
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~   99 (293)
T cd06647          20 KYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLA   99 (293)
T ss_pred             hceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCC
Confidence            34556789999999999998654 78899998764322 235688899999999999999999888665    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++...        .++...+..++.|++.||.|||++++.|.|+.
T Consensus       100 ~~~L~~~~~~~--------~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~  142 (293)
T cd06647         100 GGSLTDVVTET--------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIK  142 (293)
T ss_pred             CCcHHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCC
Confidence            99999998642        36788889999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.64  E-value=2.6e-15  Score=112.41  Aligned_cols=111  Identities=14%  Similarity=0.178  Sum_probs=93.0

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGS  107 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~  107 (156)
                      .+...||+|+||.||++.... +..|++|...     ...+.+|+.++..++|+||+++++.+...    ++++++. ++
T Consensus       172 ~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-----~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~  245 (461)
T PHA03211        172 AIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-----YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SD  245 (461)
T ss_pred             EEEEEEccCCCeEEEEEEECCCCCEEEEeccc-----ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CC
Confidence            345689999999999999866 7889998532     23457899999999999999999987665    8888885 68


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |..++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       246 L~~~l~~~------~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLK  287 (461)
T PHA03211        246 LYTYLGAR------LRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIK  287 (461)
T ss_pred             HHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCC
Confidence            98888653      2358899999999999999999999999999984

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.64  E-value=5.1e-15  Score=104.36  Aligned_cols=118  Identities=27%  Similarity=0.351  Sum_probs=101.0

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      ..+.+.+|+|.+|.||.+.... +..+++|.+.......+.+..|+..+..++|+|++++.+.+...    +++||++++
T Consensus        21 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~  100 (286)
T cd06614          21 YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGG  100 (286)
T ss_pred             chHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCC
Confidence            3445689999999999999864 78899999876544346788999999999999999999988766    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++...      ...++...+..++.|++.||.|||+.++.|.|+.
T Consensus       101 ~L~~~l~~~------~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~  143 (286)
T cd06614         101 SLTDIITQN------FVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIK  143 (286)
T ss_pred             cHHHHHHHh------ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCC
Confidence            999999764      2258889999999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.63  E-value=5.1e-15  Score=102.82  Aligned_cols=119  Identities=17%  Similarity=0.216  Sum_probs=97.1

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc------eeeecC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG------LVYEFM  103 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv~e~~  103 (156)
                      +.+.+|+|+||.||++.... +..+++|.+......   .+.+..|+.+++.++|+|++++.+.+...      +++||+
T Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~   83 (265)
T cd08217           4 VLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYC   83 (265)
T ss_pred             eeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhc
Confidence            45689999999999998654 788999988653322   24678899999999999999998876542      899999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-----hcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLI-----AVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH-----~~~~~h~~i~  155 (156)
                      ++++|.+++......   ...+++..++.++.|++.||.|||     +.++.|+|+.
T Consensus        84 ~~~~L~~~l~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~  137 (265)
T cd08217          84 EGGDLAQLIQKCKKE---RKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLK  137 (265)
T ss_pred             cCCCHHHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCC
Confidence            999999999753211   345788899999999999999999     8899999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.63  E-value=5.1e-15  Score=104.17  Aligned_cols=116  Identities=24%  Similarity=0.366  Sum_probs=96.2

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      ..+.||+|++|.||++.... +..+++|.+......   ...+.+|+.++..++|+|++++.+.+...    +++||+. 
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-   82 (284)
T cd07860           4 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-   82 (284)
T ss_pred             eeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-
Confidence            34678999999999998764 888999988643221   24688999999999999999999988766    9999996 


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++....     ...+++..+..++.|++.||+|||+.+++|+|+.
T Consensus        83 ~~l~~~~~~~~-----~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~  127 (284)
T cd07860          83 QDLKKFMDASP-----LSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLK  127 (284)
T ss_pred             cCHHHHHHhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            58888886532     3457889999999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.63  E-value=4.4e-15  Score=105.82  Aligned_cols=117  Identities=23%  Similarity=0.282  Sum_probs=96.4

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC----hHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN----GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ..+.+.+|+|+||.||.+.... +..+++|.+......    .+.+.+|+.++..++|+|++++.+.+...    +++||
T Consensus        17 y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   96 (307)
T cd06607          17 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEY   96 (307)
T ss_pred             hhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHh
Confidence            4556789999999999998764 889999988643221    14688999999999999999999988776    89999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++ |++.+++...      ...+++..+..++.|++.||.|||+.+++|+|+.
T Consensus        97 ~~-g~l~~~~~~~------~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~  142 (307)
T cd06607          97 CL-GSASDILEVH------KKPLQEVEIAAICHGALQGLAYLHSHERIHRDIK  142 (307)
T ss_pred             hC-CCHHHHHHHc------ccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence            97 4777777543      2347889999999999999999999999999985

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.63  E-value=8e-15  Score=103.62  Aligned_cols=122  Identities=19%  Similarity=0.389  Sum_probs=96.1

Q ss_pred             hhhccccccCceEEEEEeCC------CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           34 FSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      +.+.+|+|+||.||++....      ...+++|.+......  ...+.+|+.++..+.|+|++++.+.+...    +++|
T Consensus         4 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (290)
T cd05045           4 LGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVE   83 (290)
T ss_pred             ccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEE
Confidence            45689999999999997532      356888887654322  25688999999999999999999987766    8999


Q ss_pred             cCCCCChHHHhhhcCCCC-----------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMS-----------------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~-----------------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+.+++|.+++.......                 .....+++..++.++.|++.||.|||+++++|+||.
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dik  154 (290)
T cd05045          84 YAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLA  154 (290)
T ss_pred             ecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhh
Confidence            999999999986432100                 001346788899999999999999999999999984

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.63  E-value=2.3e-16  Score=113.40  Aligned_cols=113  Identities=22%  Similarity=0.373  Sum_probs=99.1

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCCh
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSL  108 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L  108 (156)
                      +.||.|+||.||+|.... ++.||+|++......  ..++..|+.++..++++|+.++++.+..+    ++|||+.+|++
T Consensus        19 ~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv   98 (467)
T KOG0201|consen   19 ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSV   98 (467)
T ss_pred             hhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcch
Confidence            689999999999999765 889999999864333  37899999999999999999999999887    99999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .++++..       ..+.+..+..+.+++..|+.|||+....|+||-
T Consensus        99 ~~lL~~~-------~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIK  138 (467)
T KOG0201|consen   99 LDLLKSG-------NILDEFEIAVILREVLKGLDYLHSEKKIHRDIK  138 (467)
T ss_pred             hhhhccC-------CCCccceeeeehHHHHHHhhhhhhcceeccccc
Confidence            9999753       334778888889999999999999999999983

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=5.9e-15  Score=102.93  Aligned_cols=116  Identities=19%  Similarity=0.220  Sum_probs=95.9

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCC------CChHHHHHHHHHHcCCCCCCccccceeeecc------ee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM------GNGEEFINEVACISGTSHVNIVTPLGICCEG------LV   99 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~------~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv   99 (156)
                      .+.+.||+|+||.||++.... +..+++|.+....      .....+.+|+.+++.++|++++++.+.+...      ++
T Consensus         5 ~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v   84 (264)
T cd06653           5 RLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIF   84 (264)
T ss_pred             eeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEE
Confidence            456789999999999998755 8899999874321      1114678899999999999999999887653      79


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||.++++|.+++...       ..++......++.|++.||.|||+.++.|.|+.
T Consensus        85 ~e~~~~~~L~~~~~~~-------~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~  133 (264)
T cd06653          85 VEYMPGGSIKDQLKAY-------GALTENVTRRYTRQILQGVSYLHSNMIVHRDIK  133 (264)
T ss_pred             EEeCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence            9999999999998653       236788889999999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.63  E-value=4.1e-15  Score=105.21  Aligned_cols=123  Identities=23%  Similarity=0.441  Sum_probs=98.0

Q ss_pred             hhhhccccccCceEEEEEeCC------CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      .+.+.||+|+||.||.+....      +..+++|.+...... .+.+.+|+.++..++|+|++++.+.+...    +++|
T Consensus         8 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   87 (291)
T cd05094           8 VLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFE   87 (291)
T ss_pred             EEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEe
Confidence            445689999999999997432      446788887654322 25688999999999999999999988876    9999


Q ss_pred             cCCCCChHHHhhhcCCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMS---------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~---------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++++|.+++.......         .....+++..+..++.|++.|+.|||++++.|+||.
T Consensus        88 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlk  150 (291)
T cd05094          88 YMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLA  150 (291)
T ss_pred             cCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccC
Confidence            999999999997542100         002347788999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.63  E-value=8.2e-15  Score=102.02  Aligned_cols=119  Identities=23%  Similarity=0.290  Sum_probs=99.4

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      .+.+.+|.|+||.||++.... +..+++|.+.....  ..+.+.+|+..++.++|+|++++.+.+...    +++|++++
T Consensus         4 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~   83 (267)
T cd06610           4 ELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSG   83 (267)
T ss_pred             eeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCC
Confidence            456789999999999998654 78899998864332  236788999999999999999999887766    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++.....    ...+++.....++.|++.||.|||+.++.|+|+.
T Consensus        84 ~~l~~~~~~~~~----~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~  129 (267)
T cd06610          84 GSLLDIMKSSYP----RGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIK  129 (267)
T ss_pred             CcHHHHHHHhcc----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            999999975321    2347888999999999999999999999999874

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.63  E-value=3.2e-15  Score=120.80  Aligned_cols=108  Identities=26%  Similarity=0.441  Sum_probs=91.2

Q ss_pred             hhccccccCceEEEEEeC-CCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCChH
Q 047548           35 SDKVRQGGYGVVYRGKLH-EGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLH  109 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~-~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L~  109 (156)
                      .+++|+|+||.||+|... .+..||+|.+......   ...|+..+..++|+|++++++++...    ++|||+++|+|.
T Consensus       695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~  771 (968)
T PLN00113        695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI---PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLS  771 (968)
T ss_pred             ccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc---cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHH
Confidence            457999999999999975 4889999988643322   13457788999999999999999876    999999999999


Q ss_pred             HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hcCCCCcccc
Q 047548          110 KFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLI---AVATLGLCIS  155 (156)
Q Consensus       110 ~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH---~~~~~h~~i~  155 (156)
                      ++++.          +++..+..++.|++.||+|||   +.+++|+|+.
T Consensus       772 ~~l~~----------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk  810 (968)
T PLN00113        772 EVLRN----------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLS  810 (968)
T ss_pred             HHHhc----------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCC
Confidence            99853          678888999999999999999   6689999974

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.63  E-value=5.4e-15  Score=104.48  Aligned_cols=120  Identities=26%  Similarity=0.358  Sum_probs=97.5

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCC-CCCCccccceeeecc---------eeee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGT-SHVNIVTPLGICCEG---------LVYE  101 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~---------lv~e  101 (156)
                      .+.+.+|+|+||.||++.... +..+++|.+.........+.+|+.++..+ +|+|++++.+.+...         +++|
T Consensus        25 ~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~e  104 (291)
T cd06639          25 EIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLE  104 (291)
T ss_pred             EEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEE
Confidence            345689999999999998755 88899998865433345677888888888 899999999887531         8999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++++|.+++.....   ....+++..+..++.|++.||.|||+.+++|+||.
T Consensus       105 y~~~~sL~~~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlk  155 (291)
T cd06639         105 LCNGGSVTELVKGLLI---CGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVK  155 (291)
T ss_pred             ECCCCcHHHHHHHhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence            9999999998864211   03457889999999999999999999999999985

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.63  E-value=5.3e-15  Score=104.28  Aligned_cols=116  Identities=23%  Similarity=0.377  Sum_probs=91.6

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCC---CCCCccccceeeecc---------
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGT---SHVNIVTPLGICCEG---------   97 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l---~~~~i~~l~~~~~~~---------   97 (156)
                      +.+.||+|+||.||++.... +..+|+|.+......   .....+|+.++..+   .|+|++++.+++...         
T Consensus         4 ~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~   83 (288)
T cd07863           4 PVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVT   83 (288)
T ss_pred             EeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEE
Confidence            45679999999999998765 889999988753221   23456677766655   799999999876531         


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|++++ +|.+++....     ...+++..+..++.|++.||.|||+.+++|+||.
T Consensus        84 lv~e~~~~-~l~~~~~~~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dik  135 (288)
T cd07863          84 LVFEHVDQ-DLRTYLDKVP-----PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLK  135 (288)
T ss_pred             EEEccccc-CHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            89999975 8888886532     2347889999999999999999999999999984

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.63  E-value=3.3e-16  Score=108.28  Aligned_cols=110  Identities=22%  Similarity=0.219  Sum_probs=96.2

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCC-CCCCccccceeeecc--------eeeecCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGT-SHVNIVTPLGICCEG--------LVYEFMSN  105 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~--------lv~e~~~~  105 (156)
                      .+||-|.-|.|..|..+. ++.+|+|++..    .....+|+++-... .|+||+.+++++.+.        +|||+++|
T Consensus        68 qvLG~GinGkV~~C~~k~T~ekfALKvL~D----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meG  143 (400)
T KOG0604|consen   68 QVLGAGINGKVVQCVHKRTQEKFALKVLLD----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEG  143 (400)
T ss_pred             hhhccccCCceEEEEeccchhhhHHHHHhc----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccc
Confidence            689999999999999776 88999999864    34456777766655 799999999988775        89999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      |+|++.+...+     ...+++.....++.||+.++.|||+.++.|+|+
T Consensus       144 GeLfsriq~~g-----~~afTErea~eI~~qI~~Av~~lH~~nIAHRDl  187 (400)
T KOG0604|consen  144 GELFSRIQDRG-----DQAFTEREASEIMKQIGLAVRYLHSMNIAHRDL  187 (400)
T ss_pred             hHHHHHHHHcc-----cccchHHHHHHHHHHHHHHHHHHHhcchhhccC
Confidence            99999998876     677999999999999999999999999999997

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.63  E-value=8.1e-15  Score=103.60  Aligned_cols=115  Identities=25%  Similarity=0.381  Sum_probs=94.0

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      +.+.||+|+||.||++.... +..+++|.+.......  ..+.+|+.++..++|+|++++.+.+...    +++||+. +
T Consensus         9 ~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~   87 (291)
T cd07870           9 NLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-T   87 (291)
T ss_pred             EEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-C
Confidence            45689999999999998754 8899999986533222  4577899999999999999999988776    8999996 6


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++.+++...      ...+++..+..++.|++.||.|||+.+++|+|+.
T Consensus        88 ~l~~~~~~~------~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlk  130 (291)
T cd07870          88 DLAQYMIQH------PGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLK  130 (291)
T ss_pred             CHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            787776543      2336677888899999999999999999999985

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.62  E-value=1e-14  Score=101.33  Aligned_cols=115  Identities=21%  Similarity=0.320  Sum_probs=100.0

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      +.+.||+|++|.||++.... +..+++|.+.....  ....+.+|+..+..++|++++++.+.+...    +++||++++
T Consensus         5 ~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (264)
T cd06623           5 RVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGG   84 (264)
T ss_pred             eeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCC
Confidence            45689999999999999876 88999998876543  236788999999999999999999988776    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA-VATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~-~~~~h~~i~  155 (156)
                      +|.+++...       ..++......++.|++.|+.|||+ .++.|+|+.
T Consensus        85 ~L~~~l~~~-------~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~  127 (264)
T cd06623          85 SLADLLKKV-------GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIK  127 (264)
T ss_pred             cHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCC
Confidence            999999753       347889999999999999999999 999999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.62  E-value=1.1e-14  Score=103.21  Aligned_cols=112  Identities=24%  Similarity=0.374  Sum_probs=95.2

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCC-ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCChH
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLH  109 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L~  109 (156)
                      ..||+|+||.||++.... +..+++|.+..... ....+.+|+.+++.+.|+|++++.+.+...    +++||+++++|.
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  105 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence            579999999999998754 88999998754322 224688899999999999999999888766    999999999999


Q ss_pred             HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          110 KFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       110 ~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++..        ..+++..+..++.|++.+|.|||+.+++|+|+.
T Consensus       106 ~~~~~--------~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~  143 (292)
T cd06657         106 DIVTH--------TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIK  143 (292)
T ss_pred             HHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            88753        236788899999999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.62  E-value=6.8e-15  Score=107.26  Aligned_cols=114  Identities=19%  Similarity=0.247  Sum_probs=92.9

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----------
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----------   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------   97 (156)
                      +.+.+.||+|+||.||.+.... +..+|+|.+.....   ..+.+.+|+.+++.++|+|++++.+.+...          
T Consensus        26 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~  105 (364)
T cd07875          26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY  105 (364)
T ss_pred             eeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEE
Confidence            4455789999999999998765 78899999875322   225678899999999999999998876431          


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++||+++ ++.+.+..         .++...+..++.|++.||.|||+++++|+||.
T Consensus       106 lv~e~~~~-~l~~~~~~---------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlk  153 (364)
T cd07875         106 IVMELMDA-NLCQVIQM---------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK  153 (364)
T ss_pred             EEEeCCCC-CHHHHHHh---------cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCC
Confidence            89999975 77777743         26678888999999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.62  E-value=8.7e-15  Score=102.22  Aligned_cols=121  Identities=25%  Similarity=0.356  Sum_probs=100.0

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCC-CCCCccccceeeec------c----ee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGT-SHVNIVTPLGICCE------G----LV   99 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~------~----lv   99 (156)
                      ..+.+.||+|++|.||.+.... +..+++|.+.........+.+|+.++..+ .|+|++++.+.+..      .    ++
T Consensus         8 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv   87 (275)
T cd06608           8 FELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLV   87 (275)
T ss_pred             eeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEE
Confidence            3456789999999999999765 78899998876544456788999999998 79999999988753      1    89


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++++|.+++.....   ....+++..+..++.|++.||.|||+.++.|.|+.
T Consensus        88 ~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~  140 (275)
T cd06608          88 MELCGGGSVTDLVKGLRK---KGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIK  140 (275)
T ss_pred             EEcCCCCcHHHHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Confidence            999999999998865321   02457888999999999999999999999999974

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.62  E-value=4.6e-15  Score=107.79  Aligned_cols=114  Identities=21%  Similarity=0.270  Sum_probs=92.5

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc----------
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG----------   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------   97 (156)
                      ..+.+.||+|+||.||.+.... +..+|+|.+......   ...+.+|+.+++.++|+|++++.+.+...          
T Consensus        19 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~   98 (355)
T cd07874          19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVY   98 (355)
T ss_pred             eeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeE
Confidence            3455789999999999998654 888999988753222   25677899999999999999999876431          


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++||+++ ++.+.+..         .++...+..++.|++.||.|||+++++|+||.
T Consensus        99 lv~e~~~~-~l~~~~~~---------~l~~~~~~~~~~qi~~aL~~LH~~givHrDik  146 (355)
T cd07874          99 LVMELMDA-NLCQVIQM---------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK  146 (355)
T ss_pred             EEhhhhcc-cHHHHHhh---------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            89999965 67776643         26778888999999999999999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.62  E-value=1.1e-14  Score=102.63  Aligned_cols=112  Identities=19%  Similarity=0.223  Sum_probs=88.3

Q ss_pred             ccccccCceEEEEEeCC-CcEEEEEecccCCCC----hHHHHHHHHHHc---CCCCCCccccceeeecc----eeeecCC
Q 047548           37 KVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN----GEEFINEVACIS---GTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~----~~~~~~e~~~l~---~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .||+|+||.||++.... +..+|+|.+......    ......+..++.   ...|++++.+.+.+...    +++||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            47999999999998765 889999988653221    122334443333   34789999988877664    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        81 ~~~L~~~i~~~-------~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dik  124 (279)
T cd05633          81 GGDLHYHLSQH-------GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLK  124 (279)
T ss_pred             CCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCC
Confidence            99999988653       347899999999999999999999999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.62  E-value=4e-15  Score=104.27  Aligned_cols=116  Identities=18%  Similarity=0.216  Sum_probs=98.2

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCC-CCCccccceeeecc----eeeec
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTS-HVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~l~~~~~~~----lv~e~  102 (156)
                      .+.+.||+|++|.||++.... +..+++|++.....    ....+.+|..++..+. |+|++++.+.+...    +++|+
T Consensus         4 ~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd05581           4 KFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEY   83 (280)
T ss_pred             eEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcC
Confidence            345689999999999999764 88999999875321    1245788889999998 99999999887765    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++...       ..+++..+..++.|++.||.|||+.++.|.|+.
T Consensus        84 ~~~~~L~~~l~~~-------~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~  129 (280)
T cd05581          84 APNGELLQYIRKY-------GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLK  129 (280)
T ss_pred             CCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence            9999999999763       348899999999999999999999999999875

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.62  E-value=1.4e-14  Score=101.29  Aligned_cols=121  Identities=25%  Similarity=0.425  Sum_probs=94.7

Q ss_pred             hhhccccccCceEEEEEeCC----CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc---------
Q 047548           34 FSDKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG---------   97 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---------   97 (156)
                      +.++||+|+||.||++....    +..+++|.+......   .+.+.+|+.++..+.|+|++++.+.+...         
T Consensus         3 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   82 (273)
T cd05074           3 LGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIP   82 (273)
T ss_pred             chhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccce
Confidence            45689999999999998532    678999988754322   24678899999999999999999876432         


Q ss_pred             -eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 -LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 -lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       ++++|.++|+|.+++...... .....++......++.|++.||+|||++++.|+||.
T Consensus        83 ~~~~~~~~~~~l~~~~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dik  140 (273)
T cd05074          83 MVILPFMKHGDLHTFLLMSRIG-EEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLA  140 (273)
T ss_pred             EEEEecCCCCcHHHHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccc
Confidence             677899999998887532110 002246788899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.62  E-value=1.4e-15  Score=106.98  Aligned_cols=111  Identities=23%  Similarity=0.378  Sum_probs=95.3

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc---------eeeec
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG---------LVYEF  102 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---------lv~e~  102 (156)
                      +.+|+|+||.|+.+..+. +..||+|.+.....   ..++..+|+.+++.++|+|++.+.+++..+         +++|+
T Consensus        28 ~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~el  107 (359)
T KOG0660|consen   28 EPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFEL  107 (359)
T ss_pred             ccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhH
Confidence            579999999999998765 89999998874332   337789999999999999999999888773         89999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      ++. +|.+.++.       ++.++......++.|++.||.|+|+-+++|+|.
T Consensus       108 Met-DL~~iik~-------~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDL  151 (359)
T KOG0660|consen  108 MET-DLHQIIKS-------QQDLTDDHAQYFLYQILRGLKYIHSANVIHRDL  151 (359)
T ss_pred             Hhh-HHHHHHHc-------CccccHHHHHHHHHHHHHhcchhhccccccccc
Confidence            954 99999986       344888888999999999999999999999996

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.62  E-value=3.4e-16  Score=117.79  Aligned_cols=113  Identities=19%  Similarity=0.310  Sum_probs=95.9

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCCCh-HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCChH
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG-EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLH  109 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~-~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L~  109 (156)
                      -.||.|+||.||++.-+. +...|.|++.....+. .++.-|+.+|....||+++++++.+...    ++.|||.||-..
T Consensus        38 GELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVD  117 (1187)
T KOG0579|consen   38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVD  117 (1187)
T ss_pred             hhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHh
Confidence            367999999999998765 6666778887644333 7899999999999999999998877665    889999998777


Q ss_pred             HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          110 KFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       110 ~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      ..+...      .+.+++.++.-+|.|++.+|.|||+++++|+|+
T Consensus       118 aimlEL------~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDL  156 (1187)
T KOG0579|consen  118 AIMLEL------GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDL  156 (1187)
T ss_pred             HHHHHh------ccccchHHHHHHHHHHHHHHHHHhhcchhhhhc
Confidence            766654      566999999999999999999999999999986

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.62  E-value=1e-14  Score=103.17  Aligned_cols=116  Identities=20%  Similarity=0.309  Sum_probs=95.5

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc------eeeec
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG------LVYEF  102 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv~e~  102 (156)
                      .+.+.||+|.||.||++.... +..+++|.++......   ..+.+|+.++..+.|+|++++.+.+...      +++||
T Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~   87 (293)
T cd07843           8 EKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEY   87 (293)
T ss_pred             hhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehh
Confidence            445689999999999999865 7889999887533222   3567899999999999999998876542      99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +.+ +|.+++...      ...+++..+..++.|++.||.|||+.+++|+||.
T Consensus        88 ~~~-~L~~~~~~~------~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~  133 (293)
T cd07843          88 VEH-DLKSLMETM------KQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLK  133 (293)
T ss_pred             cCc-CHHHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCC
Confidence            975 898888654      2347899999999999999999999999999985

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.62  E-value=6.1e-15  Score=103.85  Aligned_cols=116  Identities=20%  Similarity=0.238  Sum_probs=96.0

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .+.+.||+|++|.||++.... +..+++|.+.....   ....+.+|+.+++.+.|+|++++.+.+...    +++||++
T Consensus         4 ~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~   83 (288)
T cd07833           4 EVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVE   83 (288)
T ss_pred             eEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCC
Confidence            455789999999999998765 78999998875322   225688999999999999999999998776    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++.+..+...       ...++...+..++.|++.||.|||+++++|.|+.
T Consensus        84 ~~~l~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~  127 (288)
T cd07833          84 RTLLELLEAS-------PGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIK  127 (288)
T ss_pred             CCHHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            8666655543       2337889999999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.62  E-value=1.3e-14  Score=103.65  Aligned_cols=118  Identities=19%  Similarity=0.269  Sum_probs=92.1

Q ss_pred             hccccccCceEEEEEeCC---CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc------eeeecCCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE---GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG------LVYEFMSNG  106 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~---~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv~e~~~~g  106 (156)
                      ..||+|+||.||++...+   +..+|+|.+.... ....+.+|+.++..++|+|++++.+.+...      +++||+.+ 
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-   84 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-   84 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-
Confidence            579999999999998653   5688999876532 234578899999999999999999887542      88999865 


Q ss_pred             ChHHHhhhcCCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMS--TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~--~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++.......  .....+++..+..++.|++.||.|||+.+++|+||.
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlk  135 (317)
T cd07867          85 DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLK  135 (317)
T ss_pred             cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCC
Confidence            8888875321100  012346788899999999999999999999999984

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.61  E-value=6.2e-15  Score=108.55  Aligned_cols=112  Identities=14%  Similarity=0.130  Sum_probs=92.5

Q ss_pred             hhhhhccccccCceEEEEEeCC---CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE---GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~---~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      ..+.+.||+|+||.||++...+   +..+++|.+...    ....+|+.++..++|+|++++++.+...    ++++++.
T Consensus        94 y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  169 (392)
T PHA03207         94 YNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK  169 (392)
T ss_pred             eEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC
Confidence            4556789999999999997543   567888887532    3456899999999999999999887765    8888885


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       ++|.+++..       ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       170 -~~l~~~l~~-------~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlk  212 (392)
T PHA03207        170 -CDLFTYVDR-------SGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVK  212 (392)
T ss_pred             -CCHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence             589888854       3347899999999999999999999999999984

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=1.6e-14  Score=100.49  Aligned_cols=113  Identities=21%  Similarity=0.205  Sum_probs=90.7

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCCCh----HHHHHHHHH-HcCCCCCCccccceeeecc----eeeecCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG----EEFINEVAC-ISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~----~~~~~e~~~-l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+|+|+||.||++.... +..+|+|.+.......    ..+..|... .....|+|++++.+.+...    +++||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            468999999999998755 7899999986532211    233444443 4455899999999988765    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++...       ..++...+..++.|++.||.|||+.++.|+|+.
T Consensus        82 ~~L~~~l~~~-------~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~  124 (260)
T cd05611          82 GDCASLIKTL-------GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIK  124 (260)
T ss_pred             CCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            9999998753       347889999999999999999999999999985

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.61  E-value=1.6e-14  Score=101.66  Aligned_cols=116  Identities=22%  Similarity=0.340  Sum_probs=96.7

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.||+|.+|.||++.... +..+++|.+.....   ....+.+|+.++..++|++++++.+.+...    +++||++ 
T Consensus         3 ~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-   81 (283)
T cd07835           3 KVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-   81 (283)
T ss_pred             hheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-
Confidence            44679999999999998764 88999998865321   225678899999999999999999988776    8999995 


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++....     ...+++..+..++.|++.||.|||++++.|+|+.
T Consensus        82 ~~l~~~~~~~~-----~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~  126 (283)
T cd07835          82 LDLKKYMDSSP-----LTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLK  126 (283)
T ss_pred             cCHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCC
Confidence            58999886532     2357899999999999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.61  E-value=1.2e-14  Score=103.59  Aligned_cols=116  Identities=19%  Similarity=0.303  Sum_probs=95.2

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc------eeeec
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG------LVYEF  102 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv~e~  102 (156)
                      .+.+.||+|+||.||++.... +..+|+|.+......   ...+.+|+.++..++|+|++++.+.+...      +++||
T Consensus        10 ~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~   89 (309)
T cd07845          10 EKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEY   89 (309)
T ss_pred             eEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEec
Confidence            345689999999999999765 889999988643222   13466899999999999999999887543      89999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +.+ +|.+++...      ...+++..+..++.|++.||.|||+.+++|+||.
T Consensus        90 ~~~-~l~~~l~~~------~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~  135 (309)
T cd07845          90 CEQ-DLASLLDNM------PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLK  135 (309)
T ss_pred             CCC-CHHHHHHhc------ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            965 888888653      2447889999999999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=1.9e-14  Score=99.48  Aligned_cols=115  Identities=26%  Similarity=0.373  Sum_probs=98.8

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.||+|.+|.+|++.... +..+++|.+.....   ....+.+|+.++..+.|++++++.+.+...    +++||+++
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   83 (254)
T cd06627           4 LGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAEN   83 (254)
T ss_pred             eeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCC
Confidence            45689999999999998764 78899999876543   235688999999999999999999887765    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++...       ..+++..+..++.|++.++.|||+.++.|+|+.
T Consensus        84 ~~L~~~~~~~-------~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~  126 (254)
T cd06627          84 GSLRQIIKKF-------GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIK  126 (254)
T ss_pred             CcHHHHHHhc-------cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Confidence            9999998753       347889999999999999999999999999985

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.61  E-value=2.5e-14  Score=102.47  Aligned_cols=116  Identities=22%  Similarity=0.276  Sum_probs=95.6

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC----hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN----GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      ...+.||+|+||.||++.... +..+++|.+......    ...+..|+.++..++|+|++++.+.+...    +++||+
T Consensus        28 ~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  107 (317)
T cd06635          28 TDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYC  107 (317)
T ss_pred             hhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCC
Confidence            445679999999999998754 788999988643211    14678899999999999999999988776    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++ ++.+.+...      ...+++..+..++.|++.||.|||++++.|+|+.
T Consensus       108 ~g-~l~~~~~~~------~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~  152 (317)
T cd06635         108 LG-SASDLLEVH------KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIK  152 (317)
T ss_pred             CC-CHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            75 787777543      3347889999999999999999999999999975

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.61  E-value=2.7e-15  Score=112.24  Aligned_cols=122  Identities=16%  Similarity=0.221  Sum_probs=103.5

Q ss_pred             HHhhhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCC-C-----CCccccceeeecc--
Q 047548           27 VKKMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTS-H-----VNIVTPLGICCEG--   97 (156)
Q Consensus        27 ~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~-~-----~~i~~l~~~~~~~--   97 (156)
                      ....++.+.++||+|+||+|.+|.... ++.||+|+++...........|+.+|..++ |     -|++++.+++...  
T Consensus       183 ~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H  262 (586)
T KOG0667|consen  183 HIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH  262 (586)
T ss_pred             eeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence            333355667899999999999999766 999999999976655667788999999885 3     3799999888776  


Q ss_pred             --eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548           98 --LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus        98 --lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                        +|+|.+.. +|+++++...     ..+++...+..++.||+.||..||..+++|-|+
T Consensus       263 lciVfELL~~-NLYellK~n~-----f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDL  315 (586)
T KOG0667|consen  263 LCIVFELLST-NLYELLKNNK-----FRGLSLPLVRKFAQQILTALLFLHELGIIHCDL  315 (586)
T ss_pred             eeeeehhhhh-hHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence              99999866 9999999754     567899999999999999999999999999885

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.61  E-value=1.7e-14  Score=101.81  Aligned_cols=112  Identities=26%  Similarity=0.356  Sum_probs=95.1

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCChH
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLH  109 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L~  109 (156)
                      +.||+|++|.||++.... +..+++|.+...... .+.+.+|+.++..+.|+|++++.+.+...    +++||+++++|.
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~  104 (285)
T cd06648          25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALT  104 (285)
T ss_pred             eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHH
Confidence            589999999999998654 788999987643322 25678899999999999999999987765    999999999999


Q ss_pred             HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          110 KFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       110 ~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++...        .++...+..++.|++.||.|||++++.|+||.
T Consensus       105 ~~~~~~--------~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~  142 (285)
T cd06648         105 DIVTHT--------RMNEEQIATVCLAVLKALSFLHAQGVIHRDIK  142 (285)
T ss_pred             HHHHhC--------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            988652        26788889999999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.61  E-value=1.7e-15  Score=105.80  Aligned_cols=112  Identities=22%  Similarity=0.321  Sum_probs=99.2

Q ss_pred             hccccccCceEEEEEe-CCCcEEEEEecccCCCCh-HHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCCCCCh
Q 047548           36 DKVRQGGYGVVYRGKL-HEGRVAAVKVLSESMGNG-EEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMSNGSL  108 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~-~~~~~~a~k~~~~~~~~~-~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~~g~L  108 (156)
                      +.||+|+|+.|-.|.. ..+..+|||++....... ....+|+.++... .|+||++++.+|.+.    +|||-+.||+|
T Consensus        84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl  163 (463)
T KOG0607|consen   84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL  163 (463)
T ss_pred             HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence            5799999999999884 458899999998765443 6799999999887 799999999999987    99999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      .+.|.+.       ..+++....++..+|+.||++||.+++.|+|+
T Consensus       164 LshI~~~-------~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDl  202 (463)
T KOG0607|consen  164 LSHIQKR-------KHFNEREASRVVKDIASALDFLHTKGIAHRDL  202 (463)
T ss_pred             HHHHHHh-------hhccHHHHHHHHHHHHHHHHHHhhcCcccccC
Confidence            9999763       45889999999999999999999999999986

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.61  E-value=1.5e-14  Score=102.43  Aligned_cols=117  Identities=20%  Similarity=0.276  Sum_probs=95.5

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .+.+.||+|.+|.||++.... +..+++|.+......   ...+.+|+.+++.+.|+|++++.+.+...    +++||++
T Consensus         5 ~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   84 (294)
T PLN00009          5 EKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD   84 (294)
T ss_pred             EEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc
Confidence            345689999999999998764 888999988653222   24678899999999999999999998776    9999996


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       +++.+++....     ...++...+..++.|++.||.|||+++++|+|+.
T Consensus        85 -~~l~~~~~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~  129 (294)
T PLN00009         85 -LDLKKHMDSSP-----DFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLK  129 (294)
T ss_pred             -ccHHHHHHhCC-----CCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence             48888876432     2235678888999999999999999999999875

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.60  E-value=1.3e-14  Score=101.95  Aligned_cols=118  Identities=20%  Similarity=0.287  Sum_probs=92.7

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHH-HcCCCCCCccccceeeecc----eeeecCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVAC-ISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~-l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.||+|+||.||++.... +..+|+|.+......  ...+..|+.. ++..+|+|++++.+.+...    +++||++ 
T Consensus         5 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-   83 (283)
T cd06617           5 VIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-   83 (283)
T ss_pred             EEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-
Confidence            45679999999999999765 889999988754322  2345555554 5667899999999988765    8999996 


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV-ATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~-~~~h~~i~  155 (156)
                      ++|.+++......   ...+++..+..++.|++.||.|||++ .++|+|+.
T Consensus        84 ~~l~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlk  131 (283)
T cd06617          84 TSLDKFYKKVYDK---GLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVK  131 (283)
T ss_pred             ccHHHHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCC
Confidence            5888887653211   34578999999999999999999998 89999875

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.60  E-value=1.9e-14  Score=102.07  Aligned_cols=117  Identities=21%  Similarity=0.280  Sum_probs=95.2

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeec-----------
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCE-----------   96 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~-----------   96 (156)
                      ..+.+.+|+|+||.||++..+. +..+++|.+.....   ....+.+|+.+++.++|+|++++.+.+..           
T Consensus         9 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~   88 (302)
T cd07864           9 FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDK   88 (302)
T ss_pred             hheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccC
Confidence            4456789999999999999865 88899999865321   22467789999999999999999887653           


Q ss_pred             -c--eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           97 -G--LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        97 -~--lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       .  +++||+++ ++...+...      ...+++..+..++.|++.||.|||+++++|+|+.
T Consensus        89 ~~~~lv~e~~~~-~l~~~l~~~------~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~  143 (302)
T cd07864          89 GAFYLVFEYMDH-DLMGLLESG------LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIK  143 (302)
T ss_pred             CcEEEEEcccCc-cHHHHHhcC------CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence             1  89999976 777777543      2347889999999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.60  E-value=2.4e-15  Score=109.23  Aligned_cols=113  Identities=30%  Similarity=0.521  Sum_probs=91.3

Q ss_pred             hhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHc--CCCCCCccccceeeecc--------eeeec
Q 047548           33 SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACIS--GTSHVNIVTPLGICCEG--------LVYEF  102 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~--~l~~~~i~~l~~~~~~~--------lv~e~  102 (156)
                      .+.+++|+|.||.||+|.+. ++.||||++...  +.+.|..|-.++.  .++|+||+++++.-...        +|++|
T Consensus       213 ~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~--~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~f  289 (534)
T KOG3653|consen  213 QLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ--EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEF  289 (534)
T ss_pred             hhHHHhhcCccceeehhhcc-CceeEEEecCHH--HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeee
Confidence            35578999999999999886 589999998743  3356666666666  56899999998765443        99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc---------CCCCccccC
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV---------ATLGLCIST  156 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~---------~~~h~~i~~  156 (156)
                      .+.|+|.++|+.+        ..+|....+++..+++||+|||+-         .+.|+||.+
T Consensus       290 h~kGsL~dyL~~n--------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkS  344 (534)
T KOG3653|consen  290 HPKGSLCDYLKAN--------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKS  344 (534)
T ss_pred             ccCCcHHHHHHhc--------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccc
Confidence            9999999999853        478999999999999999999974         355777653

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.60  E-value=1.5e-14  Score=102.15  Aligned_cols=115  Identities=18%  Similarity=0.230  Sum_probs=95.1

Q ss_pred             hhhccccccCceEEEEEeC----CCcEEEEEecccCC-----CChHHHHHHHHHHcCC-CCCCccccceeeecc----ee
Q 047548           34 FSDKVRQGGYGVVYRGKLH----EGRVAAVKVLSESM-----GNGEEFINEVACISGT-SHVNIVTPLGICCEG----LV   99 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~----~~~~~a~k~~~~~~-----~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv   99 (156)
                      +.+.||+|+||.||.+...    .+..+++|.+....     ...+.+..|+.++..+ +|++++.+.+.+...    ++
T Consensus         4 ~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv   83 (290)
T cd05613           4 LLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLI   83 (290)
T ss_pred             eeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEE
Confidence            4568999999999998852    47889999986522     1225577899999999 689999998887665    99


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++++|.+++...       ..++...+..++.|++.||.|||+++++|+|+.
T Consensus        84 ~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~  132 (290)
T cd05613          84 LDYINGGELFTHLSQR-------ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIK  132 (290)
T ss_pred             EecCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence            9999999999998753       336788888999999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.60  E-value=1.1e-14  Score=100.86  Aligned_cols=119  Identities=24%  Similarity=0.334  Sum_probs=98.0

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.+|+|++|.+|++.... +..+++|.+.....   ....+.+|+.+++.++|+|++++.+.+...    +++||+++
T Consensus         4 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   83 (256)
T cd08530           4 VLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPF   83 (256)
T ss_pred             EeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCC
Confidence            45689999999999998654 78899998875332   224677899999999999999998887765    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++......   ...+++..+..++.|++.||.|||+.++.|+|+.
T Consensus        84 ~~L~~~~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~  130 (256)
T cd08530          84 GDLSKAISKRKKK---RKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLK  130 (256)
T ss_pred             CCHHHHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Confidence            9999998653210   3457888899999999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.60  E-value=2.4e-14  Score=98.96  Aligned_cols=119  Identities=21%  Similarity=0.281  Sum_probs=99.8

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.+|.|++|.||++.... +..+++|.+.....   ....+..|+.++..++|+|++++.+.+...    +++|++++
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~   83 (258)
T cd08215           4 IIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADG   83 (258)
T ss_pred             EEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCC
Confidence            44679999999999999764 78899999876433   235688999999999999999999887765    89999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+.+.....   ....++...+..++.+++.||.|||+.++.|+|+.
T Consensus        84 ~~L~~~l~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~  130 (258)
T cd08215          84 GDLSQKIKKQKK---EGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIK  130 (258)
T ss_pred             CcHHHHHHHhhc---cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCC
Confidence            999999976421   02457889999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.60  E-value=1.7e-14  Score=104.03  Aligned_cols=114  Identities=23%  Similarity=0.288  Sum_probs=94.4

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---------------HHHHHHHHHHcCCCCCCccccceeeecc
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---------------EEFINEVACISGTSHVNIVTPLGICCEG   97 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---------------~~~~~e~~~l~~l~~~~i~~l~~~~~~~   97 (156)
                      +.+.||+|+||.||++.... +..+|+|.+.......               ..+.+|+.++..+.|+|++++.+.+...
T Consensus        13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   92 (335)
T PTZ00024         13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG   92 (335)
T ss_pred             hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence            34579999999999998664 8899999886432111               1467899999999999999999988766


Q ss_pred             ----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 ----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 ----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                          +++||+. ++|.+++...       ..++......++.|++.||.|||+.++.|+||.
T Consensus        93 ~~~~lv~e~~~-~~l~~~l~~~-------~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~  146 (335)
T PTZ00024         93 DFINLVMDIMA-SDLKKVVDRK-------IRLTESQVKCILLQILNGLNVLHKWYFMHRDLS  146 (335)
T ss_pred             CcEEEEEeccc-cCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence                8999996 5899988653       337888999999999999999999999999985

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.60  E-value=1.9e-14  Score=104.15  Aligned_cols=114  Identities=21%  Similarity=0.301  Sum_probs=93.3

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc----------e
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG----------L   98 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------l   98 (156)
                      .+.+.||+|+||.||++.... +..+|+|.+......   ...+.+|+.++..++|+|++++.+.+...          +
T Consensus        18 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~l   97 (343)
T cd07880          18 RDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYL   97 (343)
T ss_pred             EEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEE
Confidence            345689999999999998654 889999988643222   24678999999999999999998876532          7


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+ +++|.+++..        ..+++..+..++.|++.||.|||+.+++|+||.
T Consensus        98 v~e~~-~~~l~~~~~~--------~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlk  145 (343)
T cd07880          98 VMPFM-GTDLGKLMKH--------EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLK  145 (343)
T ss_pred             EEecC-CCCHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            88888 6788887753        237889999999999999999999999999985

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.60  E-value=2.7e-14  Score=100.28  Aligned_cols=115  Identities=17%  Similarity=0.293  Sum_probs=93.1

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCC-CCCCccccceeeecc------eeeecC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGT-SHVNIVTPLGICCEG------LVYEFM  103 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~------lv~e~~  103 (156)
                      +.+.+|+|+||.||++.... +..+++|.+......  .....+|+..+..+ .|+|++++.+.+...      +++||+
T Consensus         3 ~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~   82 (282)
T cd07831           3 ILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELM   82 (282)
T ss_pred             eEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecC
Confidence            45679999999999998754 888999988753222  23455788888888 599999999887754      899999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      . +++.+++...      ...+++..+..++.|++.||.|||+.+++|+|+.
T Consensus        83 ~-~~l~~~l~~~------~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~  127 (282)
T cd07831          83 D-MNLYELIKGR------KRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIK  127 (282)
T ss_pred             C-ccHHHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccC
Confidence            7 4888888653      2347889999999999999999999999999975

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.60  E-value=2.7e-14  Score=98.32  Aligned_cols=116  Identities=28%  Similarity=0.463  Sum_probs=99.9

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC-ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGS  107 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~  107 (156)
                      ..+.+|+|.+|.||++.... +..+++|.+..... ..+.+.+|+..+..+.|++++++.+.+...    +++||+++++
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~   83 (253)
T cd05122           4 ILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGS   83 (253)
T ss_pred             eeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCc
Confidence            34679999999999999764 78899999876543 346788999999999999999999988765    9999999999


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |.+++...      ...+++..+..++.|++.++.|||+.++.|+|+.
T Consensus        84 L~~~~~~~------~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~  125 (253)
T cd05122          84 LKDLLKST------NQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIK  125 (253)
T ss_pred             HHHHHhhc------CCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCC
Confidence            99998764      2457889999999999999999999999999985

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.60  E-value=1.5e-14  Score=101.72  Aligned_cols=116  Identities=21%  Similarity=0.361  Sum_probs=96.3

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC--ChHHHHHHHHHHcCCC-CCCccccceeeecc----eeeecCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG--NGEEFINEVACISGTS-HVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~-~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.||+|++|.||+|.... +..+++|.+.....  +.....+|+..+..+. |+|++++.+.+...    +++||+ +
T Consensus         3 ~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~   81 (283)
T cd07830           3 VIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-E   81 (283)
T ss_pred             eheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-C
Confidence            45689999999999999865 78899998865432  2234567888899998 99999999988776    999999 7


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++.+.+....     ...+++..+..++.|++.+|.|||++++.|.|+.
T Consensus        82 ~~l~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~  126 (283)
T cd07830          82 GNLYQLMKDRK-----GKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLK  126 (283)
T ss_pred             CCHHHHHHhcc-----cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            79999887642     2357899999999999999999999999999985

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.59  E-value=3.3e-14  Score=100.06  Aligned_cols=112  Identities=19%  Similarity=0.213  Sum_probs=88.3

Q ss_pred             ccccccCceEEEEEeCC-CcEEEEEecccCCCCh----HHHHHHHH---HHcCCCCCCccccceeeecc----eeeecCC
Q 047548           37 KVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG----EEFINEVA---CISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~----~~~~~e~~---~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .||+|+||.||.+.... ++.+|+|.+.......    .....+..   .+....|++++.+.+.+...    +++||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            47999999999998654 8899999886532111    12333333   34445789999998887765    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++...       ..+++..+..++.|++.||.|||+.++.|+||.
T Consensus        81 g~~L~~~l~~~-------~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~  124 (278)
T cd05606          81 GGDLHYHLSQH-------GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLK  124 (278)
T ss_pred             CCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCC
Confidence            99999988653       348899999999999999999999999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.59  E-value=2.4e-14  Score=101.85  Aligned_cols=117  Identities=20%  Similarity=0.307  Sum_probs=94.3

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----------
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----------   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------   97 (156)
                      ..+.+.||+|+||.||++.... +..+++|.+.....   ....+.+|+.++..++|++++++.+.+...          
T Consensus        14 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   93 (310)
T cd07865          14 YEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGS   93 (310)
T ss_pred             eEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCce
Confidence            3455789999999999998765 88999998764321   123567899999999999999998875431          


Q ss_pred             --eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 --LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 --lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                        +++||+.+ ++.+.+...      ...+++..+..++.|++.||.|||++++.|.|+.
T Consensus        94 ~~lv~e~~~~-~l~~~l~~~------~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~  146 (310)
T cd07865          94 FYLVFEFCEH-DLAGLLSNK------NVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMK  146 (310)
T ss_pred             EEEEEcCCCc-CHHHHHHhc------ccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence              88999865 888887653      2347899999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.59  E-value=1.2e-14  Score=112.10  Aligned_cols=131  Identities=22%  Similarity=0.392  Sum_probs=107.6

Q ss_pred             hHHHHhhhhhhhhccccccCceEEEEEeCC--------CcEEEEEecccCCCC--hHHHHHHHHHHcCC-CCCCccccce
Q 047548           24 YSDVKKMTNSFSDKVRQGGYGVVYRGKLHE--------GRVAAVKVLSESMGN--GEEFINEVACISGT-SHVNIVTPLG   92 (156)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~--------~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~l~~   92 (156)
                      .+++++....+.+.+|+|.||+|+++....        ...||+|.++.....  .+.+..|+.+++.+ .|+|++.+.|
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG  369 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG  369 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence            566666666777899999999999998531        457899999875443  36799999999998 7999999999


Q ss_pred             eeecc----eeeecCCCCChHHHhhhcC---------CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548           93 ICCEG----LVYEFMSNGSLHKFIYDKG---------SMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus        93 ~~~~~----lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      .|...    ++.||+..|+|.++++..+         ........++...++.++.||+.||.||.+...+|+|+
T Consensus       370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDL  444 (609)
T KOG0200|consen  370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDL  444 (609)
T ss_pred             eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhh
Confidence            99885    8999999999999998765         10000023788999999999999999999999999996

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.59  E-value=3e-14  Score=98.47  Aligned_cols=115  Identities=23%  Similarity=0.304  Sum_probs=98.3

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc------eeeecC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG------LVYEFM  103 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv~e~~  103 (156)
                      ..+.+|+|++|.||++.... +..+++|.+.....   ..+.+.+|+..+..++|+|++++.+.+...      +++|++
T Consensus         4 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~   83 (260)
T cd06606           4 RGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYV   83 (260)
T ss_pred             eeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEec
Confidence            34679999999999999874 88899999876542   236788999999999999999998876653      899999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++...       ..+++..+..++.|++.+|.|||+.++.|+|+.
T Consensus        84 ~~~~L~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~  128 (260)
T cd06606          84 SGGSLSSLLKKF-------GKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIK  128 (260)
T ss_pred             CCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence            999999998763       257889999999999999999999999999974

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.59  E-value=1.3e-14  Score=100.96  Aligned_cols=120  Identities=18%  Similarity=0.178  Sum_probs=93.0

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccC---C---CChHHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES---M---GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~---~---~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      .+.+.||+|+||.||++.... +...++|..+..   .   ........|+.++..++|+|++++.+.+...    +++|
T Consensus         3 ~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (260)
T cd08222           3 ILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITE   82 (260)
T ss_pred             eeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEE
Confidence            455789999999999998654 334444554431   1   1223466788899999999999999887766    8999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++++|..++......   ...+++..+..++.|++.||.|||+.++.|.|+.
T Consensus        83 ~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~  133 (260)
T cd08222          83 YCEGRDLDCKLEELKHT---GKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLK  133 (260)
T ss_pred             eCCCCCHHHHHHHHhhc---ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCC
Confidence            99999999988642110   3457889999999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.59  E-value=9.7e-15  Score=107.97  Aligned_cols=113  Identities=24%  Similarity=0.290  Sum_probs=94.6

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCC---CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM---GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGS  107 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~  107 (156)
                      ++||+|.||+||.|..+. |+.||+|++...+   +....+.+|+++|..++||.|+.+.-.|.+.    +|||-+.| +
T Consensus       570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G-D  648 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG-D  648 (888)
T ss_pred             hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-h
Confidence            689999999999999766 9999999998632   3336789999999999999999999998887    89999965 6


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      ..+.|-...     ...+++.....++.||+.+|.|||.++++|-|+
T Consensus       649 MLEMILSsE-----kgRL~er~TkFlvtQIL~ALr~LH~knIvHCDL  690 (888)
T KOG4236|consen  649 MLEMILSSE-----KGRLPERITKFLVTQILVALRYLHFKNIVHCDL  690 (888)
T ss_pred             HHHHHHHhh-----cccchHHHHHHHHHHHHHHHHHhhhcceeeccC
Confidence            555554321     344788888999999999999999999999775

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.59  E-value=1.9e-15  Score=120.38  Aligned_cols=114  Identities=19%  Similarity=0.258  Sum_probs=98.2

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGS  107 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~  107 (156)
                      .++|.|.||.||.+.-.+ |+..|+|.+.-.....   ..+.+|..++..+.|||+++++|+-...    ++||||.+|+
T Consensus      1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~Gs 1320 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGS 1320 (1509)
T ss_pred             cccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCc
Confidence            579999999999998655 8899999987644333   5678999999999999999999998776    9999999999


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccC
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIST  156 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~~  156 (156)
                      |.+.+...       +..++.....+..|++.|++|||+++++|+||.|
T Consensus      1321 La~ll~~g-------ri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~ 1362 (1509)
T KOG4645|consen 1321 LASLLEHG-------RIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKP 1362 (1509)
T ss_pred             HHHHHHhc-------chhhhhHHHHHHHHHHHHHHHHHhcCceecCCCc
Confidence            99998753       3366777788889999999999999999999975

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.59  E-value=2.4e-14  Score=102.19  Aligned_cols=109  Identities=16%  Similarity=0.127  Sum_probs=87.7

Q ss_pred             cCceEEEEEeC-CCcEEEEEecccCC---CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCChHHHhh
Q 047548           42 GYGVVYRGKLH-EGRVAAVKVLSESM---GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIY  113 (156)
Q Consensus        42 ~~g~v~~~~~~-~~~~~a~k~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L~~~l~  113 (156)
                      +++.||.+... .+..+|+|.+....   .....+..|+.+++.++|+|++++.+.+...    +++||+++++|.+++.
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~   91 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK   91 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence            33445555443 38899999986532   1225788999999999999999999988776    8999999999999997


Q ss_pred             hcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          114 DKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ...     ...+++..+..++.|++.||.|||+++++|+|+.
T Consensus        92 ~~~-----~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk  128 (314)
T cd08216          92 THF-----PEGLPELAIAFILKDVLNALDYIHSKGFIHRSVK  128 (314)
T ss_pred             Hhc-----ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            642     2347788899999999999999999999999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.58  E-value=2.5e-14  Score=98.74  Aligned_cols=111  Identities=21%  Similarity=0.236  Sum_probs=94.8

Q ss_pred             cccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCCh
Q 047548           38 VRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSL  108 (156)
Q Consensus        38 lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L  108 (156)
                      ||.|+||.||.+.... +..+++|.+.....    ....+..|+.++..+.|++++++.+.+...    +++|++++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            6899999999999765 88899998875322    124678899999999999999999887765    99999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+++...       ..+++..+..++.|++.|+.|+|+.++.|.|+.
T Consensus        81 ~~~l~~~-------~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~  120 (250)
T cd05123          81 FSHLSKE-------GRFSEERARFYAAEIVLALEYLHSLGIIYRDLK  120 (250)
T ss_pred             HHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence            9999753       347889999999999999999999999999875

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.58  E-value=1.8e-14  Score=103.83  Aligned_cols=115  Identities=19%  Similarity=0.293  Sum_probs=94.7

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc--------eee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG--------LVY  100 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~--------lv~  100 (156)
                      .+.+.||+|++|.||++.... +..+++|.+.....   ..+.+.+|+.++..++|+|++++.+.+...        +++
T Consensus         8 ~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~   87 (334)
T cd07855           8 KPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVM   87 (334)
T ss_pred             eeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEE
Confidence            345689999999999998765 88999998875322   225677899999999999999988876421        899


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+. ++|.+++...       ..+++..+..++.|++.||.|||+++++|+|+.
T Consensus        88 e~~~-~~l~~~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlk  134 (334)
T cd07855          88 DLME-SDLHHIIHSD-------QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLK  134 (334)
T ss_pred             ehhh-hhHHHHhccC-------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            9995 5898888642       337899999999999999999999999999984

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.58  E-value=9.2e-15  Score=112.69  Aligned_cols=118  Identities=27%  Similarity=0.408  Sum_probs=102.4

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCC-CCCCccccceeeecc---------eeee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGT-SHVNIVTPLGICCEG---------LVYE  101 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~---------lv~e  101 (156)
                      .|.+++|.|.+|.||+++... +..+|+|++............|..+++.. .|+|++.+++++...         +|||
T Consensus        22 ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVME  101 (953)
T KOG0587|consen   22 EIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVME  101 (953)
T ss_pred             EEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEee
Confidence            456799999999999998655 88889999887655556778888889887 789999999888754         9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||.+|+..+++++..     ...+.+..+..++..++.|+.+||.+.++|+||-
T Consensus       102 fC~gGSVTDLVKn~~-----g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDik  150 (953)
T KOG0587|consen  102 FCGGGSVTDLVKNTK-----GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIK  150 (953)
T ss_pred             ccCCccHHHHHhhhc-----ccchhhHHHHHHHHHHHHHHHHHhhcceeeeccc
Confidence            999999999998754     4568899999999999999999999999999983

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.58  E-value=6.4e-14  Score=99.96  Aligned_cols=117  Identities=22%  Similarity=0.279  Sum_probs=95.2

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ....+.+|+|+||.||++.... +..+++|.+.....    ..+.+.+|+.+++.++|+|++++.+++...    +++||
T Consensus        17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   96 (308)
T cd06634          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY   96 (308)
T ss_pred             HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence            4445679999999999999765 77899998764211    124677899999999999999999987776    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +. |++.+.+...      ...++...+..++.|++.||.|||+++++|+|+.
T Consensus        97 ~~-~~l~~~~~~~------~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~  142 (308)
T cd06634          97 CL-GSASDLLEVH------KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVK  142 (308)
T ss_pred             cC-CCHHHHHHHc------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            96 5887777543      3347888899999999999999999999999985

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>PTZ00284 protein kinase; Provisional

Probab=99.58  E-value=1.3e-14  Score=109.03  Aligned_cols=115  Identities=11%  Similarity=0.141  Sum_probs=86.6

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCC------CCCccccceeeecc-----eee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTS------HVNIVTPLGICCEG-----LVY  100 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~l~~~~~~~-----lv~  100 (156)
                      .+.+.||+|+||.||++.... +..||+|++............|+.++..+.      +.+++.+..++...     +++
T Consensus       132 ~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~  211 (467)
T PTZ00284        132 KILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVM  211 (467)
T ss_pred             EEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEE
Confidence            445689999999999998755 788999998653333344455666665544      44577777666543     777


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA-VATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~-~~~~h~~i~  155 (156)
                      +++ +++|.+++...       ..+++..+..++.|++.||.|||+ .+++|+||-
T Consensus       212 ~~~-g~~l~~~l~~~-------~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlK  259 (467)
T PTZ00284        212 PKY-GPCLLDWIMKH-------GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLK  259 (467)
T ss_pred             ecc-CCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCC
Confidence            776 77899988653       347888999999999999999998 599999984

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.58  E-value=3.1e-14  Score=102.74  Aligned_cols=114  Identities=22%  Similarity=0.274  Sum_probs=92.8

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc---------eee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG---------LVY  100 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---------lv~  100 (156)
                      .+.+.||+|+||.||++.... +..|++|.+.....  ....+..|+.++..++|+|++++.+.+...         +++
T Consensus         8 ~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~   87 (336)
T cd07849           8 QNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQ   87 (336)
T ss_pred             EEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEe
Confidence            455789999999999998754 88999998864222  225678899999999999999998765432         788


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+.+ ++.+.+..        ..+++..+..++.|++.||.|||+.+++|+|+.
T Consensus        88 e~~~~-~l~~~~~~--------~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlk  133 (336)
T cd07849          88 ELMET-DLYKLIKT--------QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLK  133 (336)
T ss_pred             hhccc-CHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence            98865 88877753        347888999999999999999999999999975

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.58  E-value=3.8e-14  Score=99.67  Aligned_cols=115  Identities=22%  Similarity=0.322  Sum_probs=96.3

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCC---CChHHHHHHHHHHcCCCCCCccccceeeecc------eeeecC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM---GNGEEFINEVACISGTSHVNIVTPLGICCEG------LVYEFM  103 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv~e~~  103 (156)
                      +.+.+|+|++|.||++.... +..+++|.+....   .....+.+|+.++..+.|+|++++.+.+...      +++||+
T Consensus         3 ~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~   82 (287)
T cd07840           3 KIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYM   82 (287)
T ss_pred             eeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccc
Confidence            44679999999999999875 7889999998653   1225688899999999999999999887643      999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++ +|.+++...      ...+++..+..++.|++.||.|||+.++.|.|+.
T Consensus        83 ~~-~l~~~~~~~------~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~  127 (287)
T cd07840          83 DH-DLTGLLDSP------EVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIK  127 (287)
T ss_pred             cc-cHHHHHhcc------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCc
Confidence            75 888888653      2358889999999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.57  E-value=4.4e-14  Score=101.93  Aligned_cols=115  Identities=22%  Similarity=0.339  Sum_probs=94.0

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCC-CCCCccccceeeecc------eee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGT-SHVNIVTPLGICCEG------LVY  100 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~------lv~  100 (156)
                      ..+.+.||+|+||.||++.... +..+++|.+.....   ....+.+|+.++..+ +|+|++++.+.+...      +++
T Consensus         9 y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~   88 (337)
T cd07852           9 YEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVF   88 (337)
T ss_pred             HHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEe
Confidence            4556789999999999998764 78899998754221   224577899999999 999999999987532      899


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++ +|.+++...        .+++.....++.|++.||.|||+.++.|+|+.
T Consensus        89 e~~~~-~L~~~~~~~--------~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~  134 (337)
T cd07852          89 EYMET-DLHAVIRAN--------ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLK  134 (337)
T ss_pred             ccccc-CHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            99974 898888642        46778888899999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.57  E-value=5.6e-14  Score=100.23  Aligned_cols=120  Identities=19%  Similarity=0.309  Sum_probs=96.0

Q ss_pred             hhhhccccccCceEEEEEeCC---CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc------ee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE---GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG------LV   99 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~---~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv   99 (156)
                      .+...||+|++|.||++....   +..+|+|.+....    .....+.+|+.++..+.|+|++++.+.+...      ++
T Consensus         3 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   82 (316)
T cd07842           3 EIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLL   82 (316)
T ss_pred             eEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEE
Confidence            345679999999999999754   6899999987632    1225678899999999999999999988755      89


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++ ++.+++......  ....++...+..++.|++.||.|||+.+++|+||.
T Consensus        83 ~e~~~~-~l~~~~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlk  135 (316)
T cd07842          83 FDYAEH-DLWQIIKFHRQA--KRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLK  135 (316)
T ss_pred             EeCCCc-CHHHHHHhhccC--CCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCC
Confidence            999875 777777543210  02357888999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.57  E-value=3.4e-14  Score=100.25  Aligned_cols=115  Identities=17%  Similarity=0.270  Sum_probs=94.5

Q ss_pred             hhhccccccCceEEEEEeC----CCcEEEEEecccCC-----CChHHHHHHHHHHcCC-CCCCccccceeeecc----ee
Q 047548           34 FSDKVRQGGYGVVYRGKLH----EGRVAAVKVLSESM-----GNGEEFINEVACISGT-SHVNIVTPLGICCEG----LV   99 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~----~~~~~a~k~~~~~~-----~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv   99 (156)
                      +.+.||+|++|.||++...    .+..+++|.+....     ...+.+..|+.++..+ +|++++++.+.+...    ++
T Consensus         4 ~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv   83 (288)
T cd05583           4 LLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLI   83 (288)
T ss_pred             EEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEE
Confidence            4568999999999998753    36789999886422     1224577899999999 689999998887765    89


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++++|.+++...       ..+++..+..++.|++.+|.|||+.+++|+|+.
T Consensus        84 ~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~  132 (288)
T cd05583          84 LDYVNGGELFTHLYQR-------EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIK  132 (288)
T ss_pred             EecCCCCcHHHHHhhc-------CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence            9999999999998653       337788889999999999999999999999975

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.56  E-value=1.1e-13  Score=98.91  Aligned_cols=113  Identities=25%  Similarity=0.324  Sum_probs=93.8

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCCC----hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN----GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      ..+|+|+||.||++.... +..+++|.+......    .+.+..|+.++..++|+|++++.+.+...    +++||+. +
T Consensus        27 ~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~  105 (313)
T cd06633          27 HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-G  105 (313)
T ss_pred             eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-C
Confidence            569999999999998754 788999988643221    14578899999999999999999988776    9999996 5


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++.+++...      ...+++..+..++.|++.++.|||++++.|+|+.
T Consensus       106 ~l~~~l~~~------~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~  148 (313)
T cd06633         106 SASDLLEVH------KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIK  148 (313)
T ss_pred             CHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            788877653      3347888999999999999999999999999985

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.56  E-value=4.1e-14  Score=102.37  Aligned_cols=115  Identities=18%  Similarity=0.182  Sum_probs=93.5

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeec-------------
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCE-------------   96 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~-------------   96 (156)
                      ..+.+.||.|+||.||++.... +..+++|.+...... .+.+.+|+.++..++|+|++++.+.+..             
T Consensus         7 y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~   86 (342)
T cd07854           7 YMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLT   86 (342)
T ss_pred             eEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccccc
Confidence            3445689999999999998765 889999988654333 3568899999999999999998865432             


Q ss_pred             ----c-eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           97 ----G-LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        97 ----~-lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                          . +++||+. ++|.+++..        ..+++..+..++.|++.||.|||+.+++|+||.
T Consensus        87 ~~~~~~lv~e~~~-~~L~~~~~~--------~~l~~~~~~~~~~qi~~aL~~LH~~givH~dik  141 (342)
T cd07854          87 ELNSVYIVQEYME-TDLANVLEQ--------GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLK  141 (342)
T ss_pred             ccceEEEEeeccc-ccHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence                1 8999997 488888753        237789999999999999999999999999984

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.56  E-value=4.9e-14  Score=98.92  Aligned_cols=114  Identities=25%  Similarity=0.390  Sum_probs=97.0

Q ss_pred             hhccccccCceEEEEEeCC-CcEEEEEecccCC---CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           35 SDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM---GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      .+.+|+|.+|.||.+.... +..+++|.+....   ...+.+..|+.+++.+.|++++++.+.+...    +++||++ +
T Consensus         4 ~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~   82 (282)
T cd07829           4 LEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-M   82 (282)
T ss_pred             ehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-c
Confidence            4578999999999999765 8899999987643   1225678899999999999999999887765    9999997 4


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++...      ...++...+..++.|++.||.|||+++++|+|+.
T Consensus        83 ~l~~~i~~~------~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~  125 (282)
T cd07829          83 DLKKYLDKR------PGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLK  125 (282)
T ss_pred             CHHHHHHhh------ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            899999764      2348899999999999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.56  E-value=4.1e-15  Score=103.55  Aligned_cols=117  Identities=18%  Similarity=0.273  Sum_probs=94.3

Q ss_pred             hhccccccCceEEEEEeCC-----CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc-----eeee
Q 047548           35 SDKVRQGGYGVVYRGKLHE-----GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG-----LVYE  101 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-----~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----lv~e  101 (156)
                      ...||+|.||.||++..++     ...+|+|.++.+..   -+...++|+.+++.++|+|++++..++...     +++|
T Consensus        29 ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fd  108 (438)
T KOG0666|consen   29 IGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFD  108 (438)
T ss_pred             cceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEeh
Confidence            3568999999999996433     23678888876432   236789999999999999999998888773     9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      |.+. +|++.|+-++..  ..+.++......++.||+.|+.|||++=++|+|+
T Consensus       109 YAEh-DL~~II~fHr~~--~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDL  158 (438)
T KOG0666|consen  109 YAEH-DLWHIIKFHRAS--KAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDL  158 (438)
T ss_pred             hhhh-hHHHHHHHhccc--hhccCCHHHHHHHHHHHHhhhHHHhhhheeeccC
Confidence            9977 999999764321  1244677788899999999999999999999996

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.56  E-value=7.3e-14  Score=98.81  Aligned_cols=119  Identities=20%  Similarity=0.324  Sum_probs=94.6

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCC-CCCCccccceeeecc---------ee
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGT-SHVNIVTPLGICCEG---------LV   99 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~---------lv   99 (156)
                      +.+.||+|+||.||++.... +..+++|.+.....   ....+.+|+.++..+ +|+|++++.+.+...         ++
T Consensus         5 ~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv   84 (295)
T cd07837           5 KLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLV   84 (295)
T ss_pred             EeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEE
Confidence            45689999999999999765 88999998765322   225678899999999 469999998876541         89


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++ ++.+++......  ....+++..+..++.|++.||.|||+++++|+|+.
T Consensus        85 ~e~~~~-~l~~~~~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~  137 (295)
T cd07837          85 FEYLDS-DLKKFMDSNGRG--PGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLK  137 (295)
T ss_pred             eeccCc-CHHHHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence            999985 898888653210  12357889999999999999999999999999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.55  E-value=8.9e-14  Score=100.16  Aligned_cols=114  Identities=18%  Similarity=0.263  Sum_probs=92.9

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCC---CChHHHHHHHHHHcCCCCCCccccceeeecc-----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM---GNGEEFINEVACISGTSHVNIVTPLGICCEG-----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----lv~e~~  103 (156)
                      .+.+.||.|+||.||++.... +..+++|.+....   ...+.+..|+.++..+.|+|++++.+.+...     +++||+
T Consensus        13 ~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~   92 (328)
T cd07856          13 VDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL   92 (328)
T ss_pred             EEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehh
Confidence            345789999999999998664 8899999875422   1235678899999999999999999987653     889987


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       +++|..++..        ..++......++.|++.||.|||++++.|+|+.
T Consensus        93 -~~~L~~~~~~--------~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~  135 (328)
T cd07856          93 -GTDLHRLLTS--------RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLK  135 (328)
T ss_pred             -ccCHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence             5688888763        236677788899999999999999999999874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.55  E-value=6.3e-14  Score=98.42  Aligned_cols=115  Identities=24%  Similarity=0.384  Sum_probs=96.3

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.||+|++|.||++.... +..+++|.+......   ...+.+|+.+++.++|++++++.+.+...    +++||+++
T Consensus         3 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   82 (283)
T cd05118           3 KLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT   82 (283)
T ss_pred             cceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC
Confidence            34579999999999998754 888999988754322   25678899999999999999999888766    99999975


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       ++.+++...      ...+++..+..++.|++.||.|||+.++.|.|+.
T Consensus        83 -~l~~~l~~~------~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~  125 (283)
T cd05118          83 -DLYKLIKDR------QRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLK  125 (283)
T ss_pred             -CHHHHHHhh------cccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcC
Confidence             888888654      3357889999999999999999999999999975

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.55  E-value=7.1e-14  Score=100.92  Aligned_cols=115  Identities=21%  Similarity=0.318  Sum_probs=94.0

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCC---CChHHHHHHHHHHcCCCCCCccccceeeecc---------ee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM---GNGEEFINEVACISGTSHVNIVTPLGICCEG---------LV   99 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---------lv   99 (156)
                      .+.+.||+|+||.||++.... +..+++|.+....   .....+.+|+.++..++|+|++++.+.+...         ++
T Consensus         8 ~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv   87 (337)
T cd07858           8 VPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIV   87 (337)
T ss_pred             eEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEE
Confidence            345689999999999998754 8899999886532   1234677899999999999999998765421         89


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+. ++|.+++...       ..+++.....++.|++.||.|||++++.|+|+.
T Consensus        88 ~e~~~-~~L~~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlk  135 (337)
T cd07858          88 YELMD-TDLHQIIRSS-------QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLK  135 (337)
T ss_pred             EeCCC-CCHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence            99986 6898888653       347889999999999999999999999999875

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.55  E-value=8.6e-14  Score=97.21  Aligned_cols=120  Identities=18%  Similarity=0.259  Sum_probs=93.6

Q ss_pred             hhhhccccccCceEEEEEeCC--CcEEEEEecccCCC-----------ChHHHHHHHHHHcC-CCCCCccccceeeecc-
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE--GRVAAVKVLSESMG-----------NGEEFINEVACISG-TSHVNIVTPLGICCEG-   97 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~--~~~~a~k~~~~~~~-----------~~~~~~~e~~~l~~-l~~~~i~~l~~~~~~~-   97 (156)
                      .+.+.||+|+||.||++....  +..+++|.+.....           ....+..|+.++.. ++|+|++++.+.+... 
T Consensus         3 ~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~   82 (269)
T cd08528           3 AVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEND   82 (269)
T ss_pred             hhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCC
Confidence            345689999999999999765  67889998753210           11346678887764 7999999999988776 


Q ss_pred             ---eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcccc
Q 047548           98 ---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA-VATLGLCIS  155 (156)
Q Consensus        98 ---lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~-~~~~h~~i~  155 (156)
                         +++||+++++|.+++.....   ....++...++.++.|++.||.|||+ .+++|.|+.
T Consensus        83 ~~~lv~e~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~  141 (269)
T cd08528          83 RLYIVMDLIEGAPLGEHFNSLKE---KKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLT  141 (269)
T ss_pred             eEEEEEecCCCCcHHHHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCC
Confidence               99999999999998754211   03447888999999999999999996 678999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.55  E-value=1e-13  Score=100.66  Aligned_cols=114  Identities=21%  Similarity=0.267  Sum_probs=92.4

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc----------
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG----------   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------   97 (156)
                      ....+.||+|+||.||.+.... +..+++|.+......   ...+.+|+.++..++|+|++++.+.+...          
T Consensus        18 y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   97 (353)
T cd07850          18 YQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVY   97 (353)
T ss_pred             eEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEE
Confidence            3445789999999999998764 889999998643222   24577899999999999999998876421          


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++||+.+ +|.+.+...         ++...+..++.|++.||.|||+++++|+||.
T Consensus        98 lv~e~~~~-~l~~~~~~~---------l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlk  145 (353)
T cd07850          98 LVMELMDA-NLCQVIQMD---------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLK  145 (353)
T ss_pred             EEEeccCC-CHHHHHhhc---------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCC
Confidence            89999965 888877531         6788889999999999999999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.54  E-value=8.4e-14  Score=100.90  Aligned_cols=114  Identities=20%  Similarity=0.273  Sum_probs=91.2

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc----------e
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG----------L   98 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------l   98 (156)
                      .+.+.||+|+||.||++.... +..+|+|.+......   .+.+.+|+.++..++|+|++++.+.+...          +
T Consensus        20 ~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~l   99 (345)
T cd07877          20 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL   99 (345)
T ss_pred             EEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEE
Confidence            344689999999999998654 889999988653222   24677899999999999999998876431          4


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++ +++|.+++..        ..+++..+..++.|++.||.|||+++++|+|+.
T Consensus       100 v~~~~-~~~L~~~~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlk  147 (345)
T cd07877         100 VTHLM-GADLNNIVKC--------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLK  147 (345)
T ss_pred             Eehhc-ccCHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence            55554 7789887753        237888899999999999999999999999985

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.54  E-value=5e-14  Score=94.03  Aligned_cols=113  Identities=18%  Similarity=0.155  Sum_probs=81.6

Q ss_pred             hccccccCceEEEEEeCCCcEEEEEecccCCC---C-------hH-----------------HHHHHHHHHcCCCCCCcc
Q 047548           36 DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMG---N-------GE-----------------EFINEVACISGTSHVNIV   88 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~---~-------~~-----------------~~~~e~~~l~~l~~~~i~   88 (156)
                      ..||+|+||.||.+...+|..||+|+++....   .       ..                 ....|...+..+.++++.
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~   82 (190)
T cd05147           3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP   82 (190)
T ss_pred             CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            47999999999999977789999999975321   1       01                 123488888877665543


Q ss_pred             ccceeeec-c-eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCcccc
Q 047548           89 TPLGICCE-G-LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL-IAVATLGLCIS  155 (156)
Q Consensus        89 ~l~~~~~~-~-lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yL-H~~~~~h~~i~  155 (156)
                      ........ . ++|||++++++......       ...++...+..++.|++.+|.|+ |+.+++|+|+.
T Consensus        83 ~p~~~~~~~~~iVmE~i~g~~l~~~~~~-------~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlk  145 (190)
T cd05147          83 CPEPILLKSHVLVMEFIGDDGWAAPRLK-------DAPLSESKARELYLQVIQIMRILYQDCRLVHADLS  145 (190)
T ss_pred             CCcEEEecCCEEEEEEeCCCCCcchhhh-------cCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            22221112 2 99999998776544322       23477888999999999999999 79999999985

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.54  E-value=1.5e-13  Score=96.16  Aligned_cols=107  Identities=15%  Similarity=0.172  Sum_probs=85.4

Q ss_pred             cccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHc-CCCCCCccccceeeecc----eeeecCCCCChHHH
Q 047548           38 VRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACIS-GTSHVNIVTPLGICCEG----LVYEFMSNGSLHKF  111 (156)
Q Consensus        38 lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~-~l~~~~i~~l~~~~~~~----lv~e~~~~g~L~~~  111 (156)
                      +|+|+||.||++..+. +..+++|.+........    |..... ...|+|++++.+.+...    +++||+++++|.++
T Consensus        24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~   99 (267)
T PHA03390         24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDL   99 (267)
T ss_pred             ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHH
Confidence            5999999999998755 78899998765321111    111111 12699999999988766    99999999999999


Q ss_pred             hhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          112 IYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       112 l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +...       ..+++..+..++.|++.|+.|||+.++.|+||.
T Consensus       100 l~~~-------~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~  136 (267)
T PHA03390        100 LKKE-------GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIK  136 (267)
T ss_pred             HHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCC
Confidence            9753       358899999999999999999999999999985

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.53  E-value=1.2e-14  Score=99.79  Aligned_cols=113  Identities=21%  Similarity=0.280  Sum_probs=95.4

Q ss_pred             hhccccccCceEEEEEeCC-CcEEEEEecccCCC-----Ch----HHHHHHHHHHcCC-CCCCccccceeeecc----ee
Q 047548           35 SDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-----NG----EEFINEVACISGT-SHVNIVTPLGICCEG----LV   99 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-----~~----~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv   99 (156)
                      .+.+|.|..+.|.+|..+. +...++|++.....     +.    +.-..|+.+|+++ .||+|+++.+.+..+    +|
T Consensus        22 keilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlV  101 (411)
T KOG0599|consen   22 KEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLV  101 (411)
T ss_pred             HHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhh
Confidence            3578999999998888765 77888888864221     11    3467899999998 799999999999888    89


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +|.++.|.|++++..       ...++++....+++|+.+|+.|+|.++++|+|+
T Consensus       102 Fdl~prGELFDyLts-------~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDL  149 (411)
T KOG0599|consen  102 FDLMPRGELFDYLTS-------KVTLSEKETRRIMRQLFEGVEYLHARNIVHRDL  149 (411)
T ss_pred             hhhcccchHHHHhhh-------heeecHHHHHHHHHHHHHHHHHHHHhhhhhccc
Confidence            999999999999976       345888999999999999999999999999986

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.53  E-value=1.2e-13  Score=98.29  Aligned_cols=117  Identities=20%  Similarity=0.313  Sum_probs=93.6

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc----------
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG----------   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------   97 (156)
                      ..+.+.||+|+||.||++.... +..+++|.+......   .....+|+.++..++|+|++++.+.+...          
T Consensus        10 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   89 (311)
T cd07866          10 YEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGS   89 (311)
T ss_pred             EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCce
Confidence            3456789999999999999765 788999988643221   24577899999999999999998765321          


Q ss_pred             --eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 --LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 --lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                        ++++|+.+ ++...+...      ...+++..+..++.|++.||.|||++++.|+|+.
T Consensus        90 ~~lv~~~~~~-~l~~~~~~~------~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~  142 (311)
T cd07866          90 VYMVTPYMDH-DLSGLLENP------SVKLTESQIKCYMLQLLEGINYLHENHILHRDIK  142 (311)
T ss_pred             EEEEEecCCc-CHHHHHhcc------ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence              78888865 677766543      3458899999999999999999999999999975

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.52  E-value=1.1e-13  Score=99.45  Aligned_cols=115  Identities=24%  Similarity=0.364  Sum_probs=95.7

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc---------ee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG---------LV   99 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---------lv   99 (156)
                      .+.+.||+|++|.||++.... +..+++|.+.....   ..+.+.+|+.+++.++|+|++++.+.+...         ++
T Consensus         3 ~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv   82 (330)
T cd07834           3 ELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIV   82 (330)
T ss_pred             eeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEE
Confidence            355789999999999999765 88999998876432   236788999999999999999998876432         88


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|+++ +|.+++...       ..+++..+..++.|++.||.|||++++.|+||.
T Consensus        83 ~e~~~~-~l~~~l~~~-------~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlk  130 (330)
T cd07834          83 TELMET-DLHKVIKSP-------QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLK  130 (330)
T ss_pred             ecchhh-hHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            999874 888888653       358889999999999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.52  E-value=2.3e-14  Score=96.19  Aligned_cols=110  Identities=16%  Similarity=0.296  Sum_probs=93.0

Q ss_pred             hhhhccccccCceEEEEEe-CCCcEEEEEecccCCCChHHHHHHHHHHcCCC-CCCccccceeeecc------eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKL-HEGRVAAVKVLSESMGNGEEFINEVACISGTS-HVNIVTPLGICCEG------LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~-~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~l~~~~~~~------lv~e~~~  104 (156)
                      .+.+++|.|.|+.|+.|.- .+.+.+++|++++-  ..+.+.+|+.+|..+. ++||+++.+.+.++      +++|++.
T Consensus        41 eivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV--kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~  118 (338)
T KOG0668|consen   41 EIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV--KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVN  118 (338)
T ss_pred             HHHHHHcCccHhhHhcccccCCCceEEEeeechH--HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhc
Confidence            4557899999999999974 44788999998864  3467899999999995 99999999998886      9999998


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +-+...+          ...++...+..++.+++.+|+|+||.+++|+|+
T Consensus       119 n~Dfk~l----------y~tl~d~dIryY~~elLkALdyCHS~GImHRDV  158 (338)
T KOG0668|consen  119 NTDFKQL----------YPTLTDYDIRYYIYELLKALDYCHSMGIMHRDV  158 (338)
T ss_pred             cccHHHH----------hhhhchhhHHHHHHHHHHHHhHHHhcCcccccC
Confidence            8665543          334778889999999999999999999999997

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.52  E-value=1.9e-14  Score=97.21  Aligned_cols=122  Identities=21%  Similarity=0.187  Sum_probs=100.8

Q ss_pred             hhhhhhccccccCceEEEEEe-CCCcEEEEEecccCC-CChHHHHHHHHHHcCCCCCCccccceeeecc---------ee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKL-HEGRVAAVKVLSESM-GNGEEFINEVACISGTSHVNIVTPLGICCEG---------LV   99 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~a~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---------lv   99 (156)
                      ++-+.+.+|+|+|+.|+.+.. ..+..+|+|.+.-.. .+.+...+|++..+..+|+|++++.+.....         ++
T Consensus        22 Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll  101 (302)
T KOG2345|consen   22 RYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLL  101 (302)
T ss_pred             eEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEE
Confidence            345667899999999999984 348899998887654 3447789999999999999999988765543         88


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA--TLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~--~~h~~i~  155 (156)
                      +.|...|+|.+.+.....   ....+++.+++.++.++++||.+||+..  ..|+||.
T Consensus       102 ~Pyy~~Gsl~d~i~~~k~---kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiK  156 (302)
T KOG2345|consen  102 LPYYKRGSLLDEIERLKI---KGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIK  156 (302)
T ss_pred             eehhccccHHHHHHHHhh---cCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCC
Confidence            999999999999876321   1446899999999999999999999998  8899985

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.51  E-value=1.1e-14  Score=102.21  Aligned_cols=115  Identities=14%  Similarity=0.142  Sum_probs=97.5

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      +|.++||+|.||+|..|+.+. ++.+|+|+++....    +-..-..|.++|...+||.+..+...+...    +||||.
T Consensus       171 dfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeya  250 (516)
T KOG0690|consen  171 DFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYA  250 (516)
T ss_pred             hHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEc
Confidence            566899999999999999776 89999999986321    224567899999999999999998777766    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      .||.|+-.+.+       .+.+++.....+-..|+.+|.|||+++++-+|+
T Consensus       251 nGGeLf~HLsr-------er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDl  294 (516)
T KOG0690|consen  251 NGGELFFHLSR-------ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDL  294 (516)
T ss_pred             cCceEeeehhh-------hhcccchhhhhhhHHHHHHhhhhhhCCeeeeec
Confidence            99999988866       344888888899999999999999999987775

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.51  E-value=2.7e-13  Score=95.62  Aligned_cols=119  Identities=18%  Similarity=0.230  Sum_probs=90.6

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCC-CCCccccceeeecc----eeeecCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTS-HVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~-~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.||+|+||.||++.... +..+++|.+......  ...+..|+.++..+. |+|++++++.+...    +++||+..
T Consensus         8 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~   87 (288)
T cd06616           8 DLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI   87 (288)
T ss_pred             HHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC
Confidence            34589999999999998765 889999988753322  246788998888885 99999999987765    78888754


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV-ATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~-~~~h~~i~  155 (156)
                       ++.++......  .....+++.....++.|++.||.|||+. +++|+||.
T Consensus        88 -~l~~l~~~~~~--~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlk  135 (288)
T cd06616          88 -SLDKFYKYVYE--VLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVK  135 (288)
T ss_pred             -CHHHHHHHHHH--hhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCC
Confidence             55554321000  0034578899999999999999999975 89999985

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.51  E-value=4.2e-14  Score=105.31  Aligned_cols=113  Identities=20%  Similarity=0.207  Sum_probs=93.0

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCC-------Ch--HHHHHHHHHHcCCC---CCCccccceeeecc----e
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-------NG--EEFINEVACISGTS---HVNIVTPLGICCEG----L   98 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-------~~--~~~~~e~~~l~~l~---~~~i~~l~~~~~~~----l   98 (156)
                      ..+|+|+||+|+.|.++. ...|++|.+...+-       +.  ...-.|+.++..+.   |+||+++++.|.+.    +
T Consensus       567 q~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl  646 (772)
T KOG1152|consen  567 QPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYYL  646 (772)
T ss_pred             eeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeEE
Confidence            579999999999999876 67889999976431       11  23567999999886   99999999999987    5


Q ss_pred             eeecC-CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFM-SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+|-. ++-+|+++|..+       ..+++.....++.|++.|+++||+..++|+||-
T Consensus       647 ~te~hg~gIDLFd~IE~k-------p~m~E~eAk~IFkQV~agi~hlh~~~ivhrdik  697 (772)
T KOG1152|consen  647 ETEVHGEGIDLFDFIEFK-------PRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIK  697 (772)
T ss_pred             EecCCCCCcchhhhhhcc-------CccchHHHHHHHHHHHhccccccccCceecccc
Confidence            66543 456899999764       348899999999999999999999999999984

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.50  E-value=3.3e-13  Score=94.90  Aligned_cols=116  Identities=22%  Similarity=0.381  Sum_probs=91.7

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCC---CCCCccccceeeecc---------
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGT---SHVNIVTPLGICCEG---------   97 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l---~~~~i~~l~~~~~~~---------   97 (156)
                      +.+.||+|.||.||++.... +..+++|.+.......   ..+.+|+.++..+   .|+|++++.+.+...         
T Consensus         3 ~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~   82 (287)
T cd07838           3 ELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLT   82 (287)
T ss_pred             EEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeE
Confidence            45689999999999999875 8899999987532221   3455677666554   699999999887642         


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|++.+ +|.+++....     ...+++..+..++.|++.||.|||+.+++|+|+.
T Consensus        83 l~~e~~~~-~l~~~l~~~~-----~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~  134 (287)
T cd07838          83 LVFEHVDQ-DLATYLSKCP-----KPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLK  134 (287)
T ss_pred             EEehhccc-CHHHHHHHcc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCC
Confidence            78898865 8988886532     2347889999999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.50  E-value=1.6e-14  Score=114.03  Aligned_cols=115  Identities=18%  Similarity=0.166  Sum_probs=98.7

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.++||.|+||.|...+.+. +..+|+|++...    ..+...|..|-.++..-.+++|+.+.-.|.+.    +||||+
T Consensus        78 eilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~  157 (1317)
T KOG0612|consen   78 EILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYM  157 (1317)
T ss_pred             HHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecc
Confidence            445799999999999999876 888999999863    22334566777788877889999999988887    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +||+|..++.+.      . .+++.....+...++.|++-+|+.+.+|+||
T Consensus       158 pGGDlltLlSk~------~-~~pE~~ArFY~aEiVlAldslH~mgyVHRDi  201 (1317)
T KOG0612|consen  158 PGGDLLTLLSKF------D-RLPEDWARFYTAEIVLALDSLHSMGYVHRDI  201 (1317)
T ss_pred             cCchHHHHHhhc------C-CChHHHHHHHHHHHHHHHHHHHhccceeccC
Confidence            999999999764      2 5889999999999999999999999999998

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.49  E-value=4.8e-13  Score=96.82  Aligned_cols=112  Identities=21%  Similarity=0.289  Sum_probs=89.8

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----------ee
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----------LV   99 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------lv   99 (156)
                      ..+.||+|+||.||++.... +..+|+|.+.....   ....+.+|+.++..+.|+|++++.+.+...          ++
T Consensus        19 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv   98 (342)
T cd07879          19 SLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLV   98 (342)
T ss_pred             EEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEE
Confidence            44689999999999998754 88999998864321   124578899999999999999998876532          78


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|+.. ++..++.         ..++...+..++.|++.||.|||+++++|+|+.
T Consensus        99 ~e~~~~-~l~~~~~---------~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlk  144 (342)
T cd07879          99 MPYMQT-DLQKIMG---------HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLK  144 (342)
T ss_pred             eccccc-CHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            888754 6665542         237788899999999999999999999999985

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.49  E-value=2.3e-13  Score=98.71  Aligned_cols=109  Identities=15%  Similarity=0.088  Sum_probs=81.1

Q ss_pred             hhhhhccccccCceEEEEEeC--CCcEEEEEecccCC----CC--hHHHHHHHHHHcCCCCCCccccceeeecc-eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLH--EGRVAAVKVLSESM----GN--GEEFINEVACISGTSHVNIVTPLGICCEG-LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~--~~~~~a~k~~~~~~----~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~-lv~e~  102 (156)
                      +.+.+.||+|+||.||++...  .+..+|+|.+....    ..  ...+.+|+.++..+.|++++......... ++|||
T Consensus        20 Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~~~LVmE~   99 (365)
T PRK09188         20 FVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATGKDGLVRGW   99 (365)
T ss_pred             ceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCCcEEEEEc
Confidence            455678999999999999865  36677998865321    11  24588999999999999988533222222 99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +++++|.. +. .         ...   ..++.+++.+|.|||+++++|+||
T Consensus       100 ~~G~~L~~-~~-~---------~~~---~~~~~~i~~aL~~lH~~gIiHrDL  137 (365)
T PRK09188        100 TEGVPLHL-AR-P---------HGD---PAWFRSAHRALRDLHRAGITHNDL  137 (365)
T ss_pred             cCCCCHHH-hC-c---------cch---HHHHHHHHHHHHHHHHCCCeeCCC
Confidence            99999863 21 1         111   356789999999999999999998

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.49  E-value=5.3e-13  Score=94.62  Aligned_cols=116  Identities=18%  Similarity=0.290  Sum_probs=91.8

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh--HHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG--EEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .+.+.+|+|++|.||++.... +..+++|.+.......  ..+..|+..+... .|+|++++.+.+...    +++||+.
T Consensus        18 ~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   97 (296)
T cd06618          18 ENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS   97 (296)
T ss_pred             eeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC
Confidence            455789999999999999876 8899999987543222  4466677666655 599999999998776    8999885


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA-VATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~-~~~~h~~i~  155 (156)
                      + ++..++...      ...+++..+..++.|++.||.|||+ .++.|+|+.
T Consensus        98 ~-~l~~l~~~~------~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~  142 (296)
T cd06618          98 T-CLDKLLKRI------QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVK  142 (296)
T ss_pred             c-CHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCc
Confidence            4 777776543      2357888889999999999999997 589999875

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>PRK10345 hypothetical protein; Provisional

Probab=99.49  E-value=3.5e-13  Score=91.11  Aligned_cols=107  Identities=14%  Similarity=0.162  Sum_probs=81.9

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCC-ChHHHHHHHHHHcCC-----CCCCccccceeeecc--------eee
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-NGEEFINEVACISGT-----SHVNIVTPLGICCEG--------LVY  100 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-~~~~~~~e~~~l~~l-----~~~~i~~l~~~~~~~--------lv~  100 (156)
                      +.||+|+|+.||.  .+. ... ++|++..... ..+.+.+|+.++..+     .|+||+++++.+.+.        +++
T Consensus         8 ~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~   84 (210)
T PRK10345          8 SPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA   84 (210)
T ss_pred             ceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence            5799999999996  433 334 6787765322 336789999999988     579999999998876        568


Q ss_pred             ec--CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH-HHHHhcCCCCcccc
Q 047548          101 EF--MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGL-ECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~--~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl-~yLH~~~~~h~~i~  155 (156)
                      ||  .++++|.+++++.        .+++.  ..++.+++.++ .|||+++++|+|+-
T Consensus        85 e~~G~~~~tL~~~l~~~--------~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlK  132 (210)
T PRK10345         85 DFDGKPSITLTEFAEQC--------RYEED--VAQLRQLLKKLKRYLLDNRIVTMELK  132 (210)
T ss_pred             cCCCCcchhHHHHHHcc--------cccHh--HHHHHHHHHHHHHHHHHCCEeecCCC
Confidence            88  5678999999652        14433  35577888777 89999999999984

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.48  E-value=3.6e-13  Score=97.49  Aligned_cols=114  Identities=21%  Similarity=0.291  Sum_probs=92.7

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeec---------c-e
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCE---------G-L   98 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~---------~-l   98 (156)
                      .+...||+|.+|.||.+.... +..+++|.+.....   ..+.+.+|+.+++.+.|+|++++.+.+..         . +
T Consensus        18 ~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~l   97 (343)
T cd07851          18 QNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYL   97 (343)
T ss_pred             EEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEE
Confidence            345689999999999999765 78899998865321   22457789999999999999998765532         1 8


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++||+ +++|.+++..        ..+++..+..++.|++.||.|||+.+++|+|+.
T Consensus        98 v~e~~-~~~L~~~~~~--------~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlk  145 (343)
T cd07851          98 VTHLM-GADLNNIVKC--------QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLK  145 (343)
T ss_pred             EEecC-CCCHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            88887 6699988864        237889999999999999999999999999985

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.48  E-value=6.1e-13  Score=91.58  Aligned_cols=104  Identities=15%  Similarity=0.056  Sum_probs=84.0

Q ss_pred             ccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCChHHHhhhc
Q 047548           41 GGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDK  115 (156)
Q Consensus        41 g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L~~~l~~~  115 (156)
                      |.++.||.+.... +..+++|.+.....    ...+...+....|+|++++.+.+...    +++||+++++|.+++...
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   79 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSE----YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF   79 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhh----hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh
Confidence            7899999998765 88999999875421    22333334445689999999887765    999999999999998653


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          116 GSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       116 ~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                             ..+++..+..++.|++.||.|||++++.|+|+.
T Consensus        80 -------~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlk  112 (237)
T cd05576          80 -------LNIPEECVKRWAAEMVVALDALHREGIVCRDLN  112 (237)
T ss_pred             -------cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence                   237889999999999999999999999999984

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.48  E-value=6.6e-13  Score=88.70  Aligned_cols=113  Identities=19%  Similarity=0.156  Sum_probs=82.3

Q ss_pred             hhccccccCceEEEEEeCCCcEEEEEecccCCCC----------------------h-----HHHHHHHHHHcCCCCCCc
Q 047548           35 SDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGN----------------------G-----EEFINEVACISGTSHVNI   87 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~----------------------~-----~~~~~e~~~l~~l~~~~i   87 (156)
                      ...||+|++|+||++...+|..||+|++......                      .     .....|...+..+.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            3578999999999998767899999998764211                      0     113467778888877766


Q ss_pred             cccceeeecc--eeeecCCCCChHHH-hhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcccc
Q 047548           88 VTPLGICCEG--LVYEFMSNGSLHKF-IYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA-VATLGLCIS  155 (156)
Q Consensus        88 ~~l~~~~~~~--lv~e~~~~g~L~~~-l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~-~~~~h~~i~  155 (156)
                      ..........  ++|||++++++... +.        ...++......++.|++.++.++|+ .++.|+|+.
T Consensus        82 ~~p~~~~~~~~~lVmE~~~g~~~~~~~l~--------~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlk  145 (190)
T cd05145          82 PVPEPILLKKNVLVMEFIGDDGSPAPRLK--------DVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLS  145 (190)
T ss_pred             CCceEEEecCCEEEEEEecCCCchhhhhh--------hccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence            4333222222  99999998755433 32        2236677889999999999999999 999999984

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.47  E-value=8.1e-13  Score=95.24  Aligned_cols=115  Identities=19%  Similarity=0.276  Sum_probs=90.5

Q ss_pred             hhhhccccccCceEEEEEeCC---CcEEEEEecccCCC---ChHHHHHHHHHHcCC-CCCCccccceeeecc--------
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE---GRVAAVKVLSESMG---NGEEFINEVACISGT-SHVNIVTPLGICCEG--------   97 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~---~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~--------   97 (156)
                      .+.+.||+|+||.||++....   +..+|+|.+.....   ..+.+.+|+.++..+ .|+|++++.+.+...        
T Consensus         3 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~   82 (332)
T cd07857           3 ELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELY   82 (332)
T ss_pred             eEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEE
Confidence            345689999999999999753   67899998764321   135678899999988 599999998753211        


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++++. ++|.+++..       ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        83 ~~~e~~~-~~L~~~l~~-------~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlk  132 (332)
T cd07857          83 LYEELME-ADLHQIIRS-------GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLK  132 (332)
T ss_pred             EEEeccc-CCHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            6667765 689888864       3447889999999999999999999999999974

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.47  E-value=1.4e-13  Score=104.25  Aligned_cols=121  Identities=16%  Similarity=0.183  Sum_probs=84.0

Q ss_pred             hhhhhccccccCceEEEEEeCC--CcEEEEE------------------ecccCCCChHHHHHHHHHHcCCCCCCccccc
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE--GRVAAVK------------------VLSESMGNGEEFINEVACISGTSHVNIVTPL   91 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~--~~~~a~k------------------~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~   91 (156)
                      +.+.+.||+|+||.||++..+.  +...+.|                  ...........+.+|+.++..++|+|++++.
T Consensus       150 Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~  229 (501)
T PHA03210        150 FRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILKIE  229 (501)
T ss_pred             cEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCcEe
Confidence            4455789999999999987542  1111111                  1111111124578899999999999999999


Q ss_pred             eeeecc----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           92 GICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        92 ~~~~~~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++...    ++++++. +++.+++.....  .............++.|++.||.|||+++++|+||-
T Consensus       230 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLK  294 (501)
T PHA03210        230 EILRSEANTYMITQKYD-FDLYSFMYDEAF--DWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIK  294 (501)
T ss_pred             EEEEECCeeEEEEeccc-cCHHHHHhhccc--cccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            988776    7778774 478877754211  001123356677899999999999999999999984

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.46  E-value=2.5e-12  Score=85.79  Aligned_cols=112  Identities=25%  Similarity=0.471  Sum_probs=96.6

Q ss_pred             cccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCChHH
Q 047548           38 VRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHK  110 (156)
Q Consensus        38 lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L~~  110 (156)
                      ||+|.+|.||++.... +..+++|........  .+.+.+|+..+..+.|++++++.+.+...    +++|+.++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            5899999999999865 888999998765432  36788999999999999999999988874    9999999899999


Q ss_pred             HhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          111 FIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       111 ~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++...      ....+...+..++.+++.++.+||+.+..|.|+.
T Consensus        81 ~~~~~------~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~  119 (215)
T cd00180          81 LLKEN------EGKLSEDEILRILLQILEGLEYLHSNGIIHRDLK  119 (215)
T ss_pred             HHHhc------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence            98753      1347788999999999999999999999999875

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.46  E-value=2.1e-12  Score=87.55  Aligned_cols=116  Identities=27%  Similarity=0.439  Sum_probs=98.5

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      +.+.+|+|.++.||++.... +..+++|........  .+.+.+|+..+..+.|++++++.+.+...    +++|+++++
T Consensus         3 ~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~   82 (225)
T smart00221        3 LGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGG   82 (225)
T ss_pred             eeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCC
Confidence            45678999999999999876 788999998764432  46788899999999999999999887764    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++....      ..+++.....++.+++.++.+||+.++.|.|+.
T Consensus        83 ~L~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~  125 (225)
T smart00221       83 DLFDYLRKKG------GKLSEEEARFYLRQILEALEYLHSLGIVHRDLK  125 (225)
T ss_pred             CHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            9999987532      116788999999999999999999999999875

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.46  E-value=1.1e-14  Score=109.68  Aligned_cols=115  Identities=24%  Similarity=0.365  Sum_probs=99.4

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh-HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG-EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGS  107 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~-~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~  107 (156)
                      +...+|+|+||.||+++... ++..|+|+++-...+. +..+.|+-+++..+|+||+-+++.+...    +.|||+-+|+
T Consensus        19 llqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggs   98 (829)
T KOG0576|consen   19 LLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGS   98 (829)
T ss_pred             heeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCc
Confidence            34579999999999999755 8889999998655444 6788999999999999999999988776    9999999999


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |.+.-...       .++++.++...++...+|+.|||+...+|+||.
T Consensus        99 lQdiy~~T-------gplselqiayvcRetl~gl~ylhs~gk~hRdiK  139 (829)
T KOG0576|consen   99 LQDIYHVT-------GPLSELQIAYVCRETLQGLKYLHSQGKIHRDIK  139 (829)
T ss_pred             ccceeeec-------ccchhHHHHHHHhhhhccchhhhcCCccccccc
Confidence            98876553       347889999999999999999999999999984

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.43  E-value=3.4e-13  Score=92.55  Aligned_cols=116  Identities=11%  Similarity=0.210  Sum_probs=94.3

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCC-CCCCccccceeeecc-----eeeecCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGT-SHVNIVTPLGICCEG-----LVYEFMS  104 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~-----lv~e~~~  104 (156)
                      .++.+.+|+|.||.+..++++. ...+++|.........++|.+|-..--.+ .|.||+.-+..-...     +++||+|
T Consensus        26 y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP  105 (378)
T KOG1345|consen   26 YTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAP  105 (378)
T ss_pred             hhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCc
Confidence            4677889999999999999877 77888998887665668899988766666 578888765443332     8899999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .|+|.+-+..        ...-+.....++.|++.++.|+|+.+.+|+|+-
T Consensus       106 ~gdL~snv~~--------~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK  148 (378)
T KOG1345|consen  106 RGDLRSNVEA--------AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLK  148 (378)
T ss_pred             cchhhhhcCc--------ccccHHHHHHHHHHHHHHHHHhhccchhhcccc
Confidence            9999876643        336678889999999999999999999999973

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.40  E-value=6.8e-12  Score=85.72  Aligned_cols=107  Identities=21%  Similarity=0.343  Sum_probs=91.8

Q ss_pred             cCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCChHHHhhh
Q 047548           42 GYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYD  114 (156)
Q Consensus        42 ~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L~~~l~~  114 (156)
                      +||.||++.... +..+++|.+......  .+.+.+|+..+..++|++++++.+.+...    +++|+.++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            478999999875 889999998764332  46788999999999999999999988765    99999999999999875


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          115 KGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .       ...+...+..++.+++.++.|||+.++.|.|+.
T Consensus        81 ~-------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~  114 (244)
T smart00220       81 R-------GRLSEDEARFYARQILSALEYLHSNGIIHRDLK  114 (244)
T ss_pred             c-------cCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcC
Confidence            3       227788999999999999999999999999875

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.38  E-value=5e-12  Score=95.46  Aligned_cols=122  Identities=19%  Similarity=0.265  Sum_probs=82.5

Q ss_pred             hhhccccccCceEEEEEe-----------------CCCcEEEEEecccCCCC-hHH--------------HHHHHHHHcC
Q 047548           34 FSDKVRQGGYGVVYRGKL-----------------HEGRVAAVKVLSESMGN-GEE--------------FINEVACISG   81 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~-----------------~~~~~~a~k~~~~~~~~-~~~--------------~~~e~~~l~~   81 (156)
                      +.++||+|+||.||+|..                 ..+..||+|.+...... .+.              ...|+..+..
T Consensus       149 i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~  228 (507)
T PLN03224        149 LRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAK  228 (507)
T ss_pred             EeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHH
Confidence            447899999999999863                 12467999988642211 122              2345555666


Q ss_pred             CCCCCc-----cccceeeec---------c---eeeecCCCCChHHHhhhcCCCC-----------------CCCCCCCH
Q 047548           82 TSHVNI-----VTPLGICCE---------G---LVYEFMSNGSLHKFIYDKGSMS-----------------TKNNRLEW  127 (156)
Q Consensus        82 l~~~~i-----~~l~~~~~~---------~---lv~e~~~~g~L~~~l~~~~~~~-----------------~~~~~~~~  127 (156)
                      ++|.++     +++.+++..         .   +|+||+++++|.+++.......                 ......++
T Consensus       229 l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~  308 (507)
T PLN03224        229 IKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDI  308 (507)
T ss_pred             hhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCH
Confidence            655443     445554432         2   9999999999999987532100                 00122356


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          128 TTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       128 ~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ..+..++.|++.+|.|+|+.+++|+|+.
T Consensus       309 ~~~~~i~~ql~~aL~~lH~~~ivHrDLK  336 (507)
T PLN03224        309 NVIKGVMRQVLTGLRKLHRIGIVHRDIK  336 (507)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecCCCc
Confidence            6788899999999999999999999974

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.37  E-value=1.7e-13  Score=94.28  Aligned_cols=112  Identities=24%  Similarity=0.345  Sum_probs=89.7

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc---------eeeec
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG---------LVYEF  102 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---------lv~e~  102 (156)
                      +-||-|+||.||....+. ++.+++|.+..-..   ..+.+.+|+.++...+|.|+....++....         ++.|+
T Consensus        59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TEL  138 (449)
T KOG0664|consen   59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTEL  138 (449)
T ss_pred             CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHH
Confidence            469999999999988654 88888887764221   236789999999999999999988776554         56677


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +.. +|.+.+...       ..++...+.-+..||++||.|||+-++.|+||-
T Consensus       139 mQS-DLHKIIVSP-------Q~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIK  183 (449)
T KOG0664|consen  139 MQS-DLHKIIVSP-------QALTPDHVKVFVYQILRGLKYLHTANILHRDIK  183 (449)
T ss_pred             HHh-hhhheeccC-------CCCCcchhhhhHHHHHhhhHHHhhcchhhccCC
Confidence            755 788877653       447777888899999999999999999999984

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.35  E-value=5.8e-14  Score=95.46  Aligned_cols=112  Identities=21%  Similarity=0.378  Sum_probs=91.8

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEeccc-CCC--ChHHHHHHHHHHcCCCCCCccccceeeecc------------ee
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSE-SMG--NGEEFINEVACISGTSHVNIVTPLGICCEG------------LV   99 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~-~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------------lv   99 (156)
                      .++|+|.||.||+++.+. ++.|++|...- ...  ......+|+.+|..++|+|++.++..|...            +|
T Consensus        23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylV  102 (376)
T KOG0669|consen   23 AKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLV  102 (376)
T ss_pred             HhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeee
Confidence            479999999999999766 77778765432 222  235678999999999999999998887653            89


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      |++++. +|.-++.+.      ...++...+..++.++..||.|+|++.++|+|+
T Consensus       103 f~~ceh-DLaGlLsn~------~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDm  150 (376)
T KOG0669|consen  103 FDFCEH-DLAGLLSNR------KVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDM  150 (376)
T ss_pred             HHHhhh-hHHHHhcCc------cccccHHHHHHHHHHHHHHHHHHHHhhHHhhcc
Confidence            999976 888887654      456889999999999999999999999999997

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.31  E-value=1.7e-12  Score=92.38  Aligned_cols=124  Identities=13%  Similarity=0.112  Sum_probs=97.9

Q ss_pred             HHHHhhhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCC-C-C---C-ccccceeeecc
Q 047548           25 SDVKKMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTS-H-V---N-IVTPLGICCEG   97 (156)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~-~-~---~-i~~l~~~~~~~   97 (156)
                      .|.-..++.+.+.+|+|.||.|..|.... +..||+|+++.-..+.++...|+.++..+. + |   + .+.+.+++...
T Consensus        84 gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr  163 (415)
T KOG0671|consen   84 GDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR  163 (415)
T ss_pred             ccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence            34434455666789999999999998765 789999999987777788899999999882 2 2   1 34444445444


Q ss_pred             ----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548           98 ----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus        98 ----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                          +++|.+ |-+++++++...     ..+++...+..++.|++.+|.+||++.+.|-|.
T Consensus       164 ghiCivfell-G~S~~dFlk~N~-----y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDL  218 (415)
T KOG0671|consen  164 GHICIVFELL-GLSTFDFLKENN-----YIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDL  218 (415)
T ss_pred             CceEEEEecc-ChhHHHHhccCC-----ccccchHHHHHHHHHHHHHHHHHHhcceeecCC
Confidence                799977 669999998643     567889999999999999999999999999885

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.31  E-value=9.9e-12  Score=84.21  Aligned_cols=117  Identities=18%  Similarity=0.178  Sum_probs=91.4

Q ss_pred             hhhhhhccccccCceEEEEEeC-CCcEEEEEecccCCCChHHHHHHHHHHcCCCC-CCccccceeeecc----eeeecCC
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLH-EGRVAAVKVLSESMGNGEEFINEVACISGTSH-VNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      ...+.+.||+|+||.+|.+..- .|+.||+|.-.... ....+..|..+...+++ ..++.+..+....    +||+++ 
T Consensus        16 ky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-   93 (341)
T KOG1163|consen   16 KYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-   93 (341)
T ss_pred             ceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-
Confidence            3456678999999999999854 49999999754322 22457788888888855 4555555544444    999988 


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |.+|.+++.-.      .+.++..+.+-++-|++.-+.|+|.++.+|+||-
T Consensus        94 GPsLEdLfnfC------~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIK  138 (341)
T KOG1163|consen   94 GPSLEDLFNFC------SRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIK  138 (341)
T ss_pred             CccHHHHHHHH------hhhhhHHhHHHHHHHHHHHHHHHHhhccccccCC
Confidence            88999988643      5568899999999999999999999999999983

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.31  E-value=3.2e-11  Score=85.62  Aligned_cols=118  Identities=15%  Similarity=0.110  Sum_probs=78.6

Q ss_pred             hhhhhhhccccccCceEEEEEeCC----CcEEEEEecccCCCCh--H----------HHHHHHHHHcCCCCCCcccccee
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMGNG--E----------EFINEVACISGTSHVNIVTPLGI   93 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~~~--~----------~~~~e~~~l~~l~~~~i~~l~~~   93 (156)
                      ....+.+.||+|+||.||++...+    +..+++|.........  +          ....+...+..+.|++++.+.+.
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   91 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC   91 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence            344566789999999999998654    3455666543221111  1          11223334556789999998876


Q ss_pred             eecc--------eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           94 CCEG--------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        94 ~~~~--------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +...        ++++++. .++.+.+...       ...++..+..++.|++.||.|||+.+++|+||.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiK  153 (294)
T PHA02882         92 GSFKRCRMYYRFILLEKLV-ENTKEIFKRI-------KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIK  153 (294)
T ss_pred             eeEecCCceEEEEEEehhc-cCHHHHHHhh-------ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            5443        4455443 3565655432       224677888999999999999999999999984

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.30  E-value=8.7e-12  Score=99.50  Aligned_cols=67  Identities=24%  Similarity=0.417  Sum_probs=53.7

Q ss_pred             hhhhhh--hccccccCceEEEEEeC-CCcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeec
Q 047548           30 MTNSFS--DKVRQGGYGVVYRGKLH-EGRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCE   96 (156)
Q Consensus        30 ~~~~~~--~~lg~g~~g~v~~~~~~-~~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~   96 (156)
                      -..+|.  ..||+|+||.||+++-+ +|..+|+|.+.-.....  ....+|+.++.+++|||+++++..+..
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVE  548 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVE  548 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhc
Confidence            334665  47999999999999855 49999999998654222  568899999999999999999876653

>smart00090 RIO RIO-like kinase

Probab=99.29  E-value=1.8e-11  Score=84.46  Aligned_cols=116  Identities=16%  Similarity=0.088  Sum_probs=81.8

Q ss_pred             hhhhccccccCceEEEEE--eCCCcEEEEEecccCCCC--------------------h-----HHHHHHHHHHcCCCC-
Q 047548           33 SFSDKVRQGGYGVVYRGK--LHEGRVAAVKVLSESMGN--------------------G-----EEFINEVACISGTSH-   84 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~--~~~~~~~a~k~~~~~~~~--------------------~-----~~~~~e~~~l~~l~~-   84 (156)
                      .+.+.||+|++|.||++.  ...+..||+|.+......                    .     ..+..|...+..+.+ 
T Consensus        31 ~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~  110 (237)
T smart00090       31 AIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEA  110 (237)
T ss_pred             HhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence            456789999999999998  455899999998753210                    0     124578888888754 


Q ss_pred             -CCccccceeeecceeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-CCCcccc
Q 047548           85 -VNIVTPLGICCEGLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA-TLGLCIS  155 (156)
Q Consensus        85 -~~i~~l~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~-~~h~~i~  155 (156)
                       ..+++.+......+++||+++.++......       ...........++.|++.++.+||+.+ +.|+|+.
T Consensus       111 ~i~~p~~~~~~~~~lV~E~~~g~~L~~~~~~-------~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dik  176 (237)
T smart00090      111 GVPVPKPIAWRRNVLVMEFIGGDGLPAPRLK-------DVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLS  176 (237)
T ss_pred             CCCCCeeeEecCceEEEEEecCCcccccccc-------cCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCC
Confidence             223333332111199999999887665422       222445566788999999999999999 9999984

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.28  E-value=6.3e-11  Score=80.17  Aligned_cols=108  Identities=16%  Similarity=0.188  Sum_probs=82.1

Q ss_pred             hccccccCceEEEEEeCCCcEEEEEecccCCC-C--------hHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           36 DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMG-N--------GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~-~--------~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      +.||+|++|.||++.. .+..+++|....... .        ...+.+|+.++..+.++++.....++...    +++||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            4689999999999987 466788887654221 1        12467888888888887766554443332    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++...          .. ....++.+++.+|.++|+.++.|.|+.
T Consensus        81 ~~G~~L~~~~~~~----------~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~  122 (211)
T PRK14879         81 IEGEPLKDLINSN----------GM-EELELSREIGRLVGKLHSAGIIHGDLT  122 (211)
T ss_pred             eCCcCHHHHHHhc----------cH-HHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            9999999988542          11 778889999999999999999999974

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.25  E-value=2e-12  Score=93.54  Aligned_cols=120  Identities=18%  Similarity=0.155  Sum_probs=94.2

Q ss_pred             HhhhhhhhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCC-CCCCccccceeeecc----
Q 047548           28 KKMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGT-SHVNIVTPLGICCEG----   97 (156)
Q Consensus        28 ~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----   97 (156)
                      .+..-+|..+||+|+||+|..+..++ .+.+|+|+++..    ..+.+.-..|-++|... +-|.++++.+++.+.    
T Consensus       347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy  426 (683)
T KOG0696|consen  347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY  426 (683)
T ss_pred             eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence            33334677899999999999998776 788999999863    22224445666666655 457788888877765    


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +||||+.||+|.-.+.+.+       .+.++....++..|+-||-+||++.++-+|+
T Consensus       427 FVMEyvnGGDLMyhiQQ~G-------kFKEp~AvFYAaEiaigLFFLh~kgIiYRDL  476 (683)
T KOG0696|consen  427 FVMEYVNGGDLMYHIQQVG-------KFKEPVAVFYAAEIAIGLFFLHSKGIIYRDL  476 (683)
T ss_pred             eEEEEecCchhhhHHHHhc-------ccCCchhhhhhHHHHHHhhhhhcCCeeeeec
Confidence            9999999999998887743       3778888999999999999999999887764

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.23  E-value=2.2e-11  Score=88.98  Aligned_cols=111  Identities=16%  Similarity=0.195  Sum_probs=90.4

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCC--------CChHHHHHHHHHHcCCCCCCccccceeeecc----
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM--------GNGEEFINEVACISGTSHVNIVTPLGICCEG----   97 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~--------~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----   97 (156)
                      ++-+...||.|+|+.||++..-. .+-||+|+-....        .+.+..++|-++-+.+.|+.|+++++++.-.    
T Consensus       464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF  543 (775)
T KOG1151|consen  464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF  543 (775)
T ss_pred             HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence            33445679999999999998544 6788888754321        1124578899999999999999999988765    


Q ss_pred             -eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 047548           98 -LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA  148 (156)
Q Consensus        98 -lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~  148 (156)
                       -|+||++|.+|..+|+.       ++.+++.....|+.||+.+|.||....
T Consensus       544 CTVLEYceGNDLDFYLKQ-------hklmSEKEARSIiMQiVnAL~YLNEik  588 (775)
T KOG1151|consen  544 CTVLEYCEGNDLDFYLKQ-------HKLMSEKEARSIIMQIVNALKYLNEIK  588 (775)
T ss_pred             eeeeeecCCCchhHHHHh-------hhhhhHHHHHHHHHHHHHHHHHHhccC
Confidence             89999999999999987       455899999999999999999998763

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.22  E-value=1.8e-11  Score=87.96  Aligned_cols=121  Identities=22%  Similarity=0.326  Sum_probs=93.5

Q ss_pred             hhccccccCceEEEEEeCC------CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc-----eeee
Q 047548           35 SDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG-----LVYE  101 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----lv~e  101 (156)
                      ...+-+|.||.||.|.|.+      .+.+.+|..+......  ..+..|.-.+..+.|+|+.+..+.+...     .++.
T Consensus       289 ~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~  368 (563)
T KOG1024|consen  289 SCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYP  368 (563)
T ss_pred             hhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEe
Confidence            3568899999999997654      3344566665544333  3577888889999999999999888776     6667


Q ss_pred             cCCCCChHHHhhhc-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDK-GSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++-.|+|.+|+..- +..+.+.+..+..++..++.|++.||+|||+.+++|-||-
T Consensus       369 ~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiA  423 (563)
T KOG1024|consen  369 ATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIA  423 (563)
T ss_pred             ccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhh
Confidence            77789999999732 2222235667888999999999999999999999999984

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.20  E-value=2.9e-11  Score=91.64  Aligned_cols=113  Identities=12%  Similarity=0.134  Sum_probs=95.0

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCCC----hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN----GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      +.||-|+||.|..+..-+ ...+|+|.+....--    -.....|-.+|....+.++++|+..|.+.    +||+|++||
T Consensus       635 k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGG  714 (1034)
T KOG0608|consen  635 KTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGG  714 (1034)
T ss_pred             eeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCc
Confidence            468999999999987655 678899988753211    13466777889899999999999988887    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++..+|.+.+       .+.+.....++..+..++.+.|..+.+|+||-
T Consensus       715 DmMSLLIrmg-------IFeE~LARFYIAEltcAiesVHkmGFIHRDiK  756 (1034)
T KOG0608|consen  715 DMMSLLIRMG-------IFEEDLARFYIAELTCAIESVHKMGFIHRDIK  756 (1034)
T ss_pred             cHHHHHHHhc-------cCHHHHHHHHHHHHHHHHHHHHhccceecccC
Confidence            9999998754       37888889999999999999999999999983

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.20  E-value=1e-11  Score=90.48  Aligned_cols=114  Identities=23%  Similarity=0.254  Sum_probs=95.8

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      ++||+|+||.|+.|..+. |+-+|.|.+...+    ....-..+|-.+|..++.+.|+.+-..+.+.    +|+..|.||
T Consensus       191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGG  270 (591)
T KOG0986|consen  191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGG  270 (591)
T ss_pred             EEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCC
Confidence            589999999999998766 7777877775422    1223467888899999999999998888877    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +|.-.|.+.+     +..+++.....++.+|+.||.+||+..++=+|.
T Consensus       271 DLkfHiyn~g-----~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDL  313 (591)
T KOG0986|consen  271 DLKFHIYNHG-----NPGFDEQRARFYAAEIICGLEHLHRRRIVYRDL  313 (591)
T ss_pred             ceeEEeeccC-----CCCCchHHHHHHHHHHHhhHHHHHhcceeeccC
Confidence            9998888765     567899999999999999999999999987774

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.18  E-value=7.6e-12  Score=86.26  Aligned_cols=113  Identities=20%  Similarity=0.379  Sum_probs=89.9

Q ss_pred             hhhhhccccccCceEEEEEeCCCcEEEEEecccC---CCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSES---MGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .++..+|.+...|..|+|+|.++. ++.|++...   ..-.++|..|...++...|||+..+.+.|..+    ++..|++
T Consensus       192 lnl~tkl~e~hsgelwrgrwqgnd-ivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp  270 (448)
T KOG0195|consen  192 LNLITKLAESHSGELWRGRWQGND-IVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMP  270 (448)
T ss_pred             hhhhhhhccCCCcccccccccCcc-hhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeecc
Confidence            355568888999999999997543 444666542   22336788888888889999999999999887    8889999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATL  150 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~  150 (156)
                      .|+|+..+....     +.-....+..+++.++++||+|||+...+
T Consensus       271 ~gslynvlhe~t-----~vvvd~sqav~faldiargmaflhslep~  311 (448)
T KOG0195|consen  271 FGSLYNVLHEQT-----SVVVDHSQAVRFALDIARGMAFLHSLEPM  311 (448)
T ss_pred             chHHHHHHhcCc-----cEEEecchHHHHHHHHHhhHHHHhhcchh
Confidence            999999998643     33456678899999999999999997543

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.16  E-value=2.3e-10  Score=76.75  Aligned_cols=104  Identities=16%  Similarity=0.221  Sum_probs=75.6

Q ss_pred             ccccccCceEEEEEeCCCcEEEEEecccCC-C-C-------hHHHHHHHHHHcCCCCCCcc--ccceeeecc--eeeecC
Q 047548           37 KVRQGGYGVVYRGKLHEGRVAAVKVLSESM-G-N-------GEEFINEVACISGTSHVNIV--TPLGICCEG--LVYEFM  103 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~-~-~-------~~~~~~e~~~l~~l~~~~i~--~l~~~~~~~--lv~e~~  103 (156)
                      .||+|++|.||++.+. +..+++|...... . .       ...+.+|..++..+.+.++.  .+.......  +++||+
T Consensus         1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeecC-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            3799999999999854 5678888754321 1 1       13466788888888766543  333332222  999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++....           .   .++.+++.+|.++|+.++.|.|+.
T Consensus        80 ~g~~l~~~~~~~~-----------~---~~~~~i~~~l~~lH~~gi~H~Dl~  117 (199)
T TIGR03724        80 EGKPLKDVIEEGN-----------D---ELLREIGRLVGKLHKAGIVHGDLT  117 (199)
T ss_pred             CCccHHHHHhhcH-----------H---HHHHHHHHHHHHHHHCCeecCCCC
Confidence            9999998875320           1   788999999999999999999974

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.15  E-value=2.2e-10  Score=88.09  Aligned_cols=120  Identities=18%  Similarity=0.197  Sum_probs=72.3

Q ss_pred             hhhhccccccCceEEEEEeCC-----CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCcccccee----e--ecc----
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-----GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGI----C--CEG----   97 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-----~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~----~--~~~----   97 (156)
                      .+.+.||+|+||.||++....     +..+|+|.+..... .+....+ . +....+.++..+...    .  ...    
T Consensus       135 ~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-~e~~~~e-~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (566)
T PLN03225        135 VLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-VEIWMNE-R-VRRACPNSCADFVYGFLEPVSSKKEDEYW  211 (566)
T ss_pred             EEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-hHHHHHH-H-HHhhchhhHHHHHHhhhcccccccCCceE
Confidence            345789999999999998743     57899998764321 1111111 1 111111111111110    0  111    


Q ss_pred             eeeecCCCCChHHHhhhcCCCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMST-------------KNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~-------------~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++||+.+++|.+++......-.             .........+..++.|++.||.|||+++++|+||-
T Consensus       212 LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLK  282 (566)
T PLN03225        212 LVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVK  282 (566)
T ss_pred             EEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCC
Confidence            99999999999999865321000             00011123456789999999999999999999984

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.15  E-value=5.5e-10  Score=85.52  Aligned_cols=106  Identities=13%  Similarity=0.139  Sum_probs=77.6

Q ss_pred             hhccccccCceEEEEEeCCCcEEEEEeccc-CCC---C----hHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           35 SDKVRQGGYGVVYRGKLHEGRVAAVKVLSE-SMG---N----GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~-~~~---~----~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      .+.||+|+||.||++.+.....++.+.... ...   +    .+.+.+|..++..+++++++.........    +++||
T Consensus       338 ~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~  417 (535)
T PRK09605        338 DHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEY  417 (535)
T ss_pred             cceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEe
Confidence            467899999999999875433222221111 110   1    13578899999999999887755444432    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++.               ....++.+++.+|.|||+.+++|+|+.
T Consensus       418 ~~g~~L~~~l~---------------~~~~~~~~i~~~L~~lH~~giiHrDlk  455 (535)
T PRK09605        418 IGGKDLKDVLE---------------GNPELVRKVGEIVAKLHKAGIVHGDLT  455 (535)
T ss_pred             cCCCcHHHHHH---------------HHHHHHHHHHHHHHHHHhCCCccCCCC
Confidence            99999988763               235688999999999999999999984

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.14  E-value=3e-10  Score=78.40  Aligned_cols=113  Identities=16%  Similarity=0.267  Sum_probs=89.8

Q ss_pred             hhccccccCceEEEEEeCC-CcEEEEEecccCCCCh--HHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCCCC
Q 047548           35 SDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG--EEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      ...||+|+.|+||++..+. +..+|||.+..+.+..  ++++..+.++..- .+|+|++++|+|...    +-||.+.. 
T Consensus        97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~-  175 (391)
T KOG0983|consen   97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST-  175 (391)
T ss_pred             HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH-
Confidence            3478999999999999876 8899999998765433  5677777766555 589999999999987    77777643 


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV-ATLGLCI  154 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~-~~~h~~i  154 (156)
                      -+.++++.-      ..++++..+.++...+..+|.||-.+ .++|+|+
T Consensus       176 C~ekLlkri------k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDv  218 (391)
T KOG0983|consen  176 CAEKLLKRI------KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDV  218 (391)
T ss_pred             HHHHHHHHh------cCCchHHhhhhhHHHHHHHHHHHHHhcceeeccc
Confidence            455555543      45588999999999999999999876 7889986

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.14  E-value=4.3e-11  Score=84.79  Aligned_cols=114  Identities=14%  Similarity=0.148  Sum_probs=92.7

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      +.++||.|+|++|..++++. .+-+|+|+++...    .+....+.|-.++.+. +||.++.+..++.+.    +|.||+
T Consensus       254 ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv  333 (593)
T KOG0695|consen  254 LLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYV  333 (593)
T ss_pred             eeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEe
Confidence            34689999999999998765 7788999987632    1224466666666665 789999999998887    899999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      ++|+|...+.+       .+.+++.....+...|+.+|.|||+++++-+|+
T Consensus       334 ~ggdlmfhmqr-------qrklpeeharfys~ei~lal~flh~rgiiyrdl  377 (593)
T KOG0695|consen  334 NGGDLMFHMQR-------QRKLPEEHARFYSAEICLALNFLHERGIIYRDL  377 (593)
T ss_pred             cCcceeeehhh-------hhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeec
Confidence            99999888866       445889999999999999999999999887664

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.11  E-value=1.9e-10  Score=82.87  Aligned_cols=110  Identities=15%  Similarity=0.249  Sum_probs=92.4

Q ss_pred             hhccccccCceEEEEEeC----CCcEEEEEecccCCCChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCCC
Q 047548           35 SDKVRQGGYGVVYRGKLH----EGRVAAVKVLSESMGNGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~----~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      ...+|+|+|+.||++...    ....||+|.+.... ....+..|+++|..+ .+.|++++.+++...    ++++|.+.
T Consensus        41 v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H  119 (418)
T KOG1167|consen   41 VNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEH  119 (418)
T ss_pred             hccccccchhhhhhhhHhhhccccceEeeeeccccc-CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCc
Confidence            468999999999999753    36789999887653 335688999999988 678999999988876    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      -...++...          ++...+..+++.+..+|.++|.++++|+||.
T Consensus       120 ~~f~~l~~~----------l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiK  159 (418)
T KOG1167|consen  120 DRFRDLYRS----------LSLAEIRWYLRNLLKALAHLHKNGIVHRDIK  159 (418)
T ss_pred             cCHHHHHhc----------CCHHHHHHHHHHHHHHhhhhhccCccccCCC
Confidence            888777654          5578888899999999999999999999984

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.11  E-value=9.6e-10  Score=79.20  Aligned_cols=119  Identities=18%  Similarity=0.204  Sum_probs=89.8

Q ss_pred             hhhhhhccccccCceEEEEEeCC--CcEEEEEecccCCCC-hHHHHHHHHHHcCCC----CCCccccceeee-cc----e
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE--GRVAAVKVLSESMGN-GEEFINEVACISGTS----HVNIVTPLGICC-EG----L   98 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~--~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~----~~~i~~l~~~~~-~~----l   98 (156)
                      ...+...||+|+||.||.+....  ...+|+|........ ...+..|..++..+.    ..++..+..... ..    +
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            34566789999999999998654  347888877653222 125677777777765    256777776663 33    8


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+.+ |.+|.++.+...     ...++..+...++.|++.+|.++|+.+.+|+||-
T Consensus        99 VM~l~-G~sL~dl~~~~~-----~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiK  149 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNP-----PGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIK  149 (322)
T ss_pred             EEecc-CccHHHHHHhCC-----CCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcC
Confidence            88866 789999876542     4568999999999999999999999999999983

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.09  E-value=3.8e-10  Score=75.00  Aligned_cols=116  Identities=23%  Similarity=0.315  Sum_probs=91.8

Q ss_pred             hhccccccCceEEEEEeCC-CcEEEEEecccCCCCh--HHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCCCC
Q 047548           35 SDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG--EEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      ...||.|++|.|-+.++.. |...|+|.+..+-+..  +...+++.+..+. .+|..+.++|.....    +.||.+.- 
T Consensus        51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t-  129 (282)
T KOG0984|consen   51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT-  129 (282)
T ss_pred             hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh-
Confidence            4579999999999888755 8899999998755443  5678888876655 889999999987766    88888865 


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV-ATLGLCI  154 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~-~~~h~~i  154 (156)
                      +|..+-+.-..   .+...++..+.+++..+..||.|||++ .++|+|+
T Consensus       130 Sldkfy~~v~~---~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDv  175 (282)
T KOG0984|consen  130 SLDKFYRKVLK---KGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDV  175 (282)
T ss_pred             hHHHHHHHHHh---cCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccC
Confidence            77766543110   145688999999999999999999998 8899987

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.09  E-value=7.8e-10  Score=74.30  Aligned_cols=111  Identities=14%  Similarity=0.112  Sum_probs=77.8

Q ss_pred             hhhhhccccccCceEEEEEeCCCcEEEEEecccCCCC-----------------------hHHHHHHHHHHcCCCCC--C
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGN-----------------------GEEFINEVACISGTSHV--N   86 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~-----------------------~~~~~~e~~~l~~l~~~--~   86 (156)
                      ..+.+.||+|+||.||++...++..+++|++......                       ......|..++..+.+.  .
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   96 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP   96 (198)
T ss_pred             hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence            3456789999999999998877899999986542210                       01245677777777555  3


Q ss_pred             ccccceeeecceeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           87 IVTPLGICCEGLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        87 i~~l~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++...+.....+++||+++++|.+...             ......++.+++.++.++|+.++.|.|+.
T Consensus        97 v~~~~~~~~~~lv~e~~~g~~L~~~~~-------------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~  152 (198)
T cd05144          97 VPKPIDWNRHAVVMEYIDGVELYRVRV-------------LEDPEEVLDEILEEIVKAYKHGIIHGDLS  152 (198)
T ss_pred             CCceeecCCceEEEEEeCCcchhhccc-------------cccHHHHHHHHHHHHHHHHHCCCCcCCCC
Confidence            333333211119999999988865432             12345678899999999999999999985

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.09  E-value=1.7e-10  Score=91.85  Aligned_cols=114  Identities=22%  Similarity=0.232  Sum_probs=82.0

Q ss_pred             hhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCC---CCCccccceeeecc----eeeecCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTS---HVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      .+...+|+|+||+||+|...+++.||+|+-++.. .+ .|---..+..+|+   -+.+..+..+....    ++++|.+.
T Consensus       701 ~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~-~W-EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~  778 (974)
T KOG1166|consen  701 CISKEIGEGSYGSVYVATHSNGKLVALKVEKPPN-PW-EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPY  778 (974)
T ss_pred             EEEeeeccccceEEEEeecCCCcEEEEEeecCCC-ce-eeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeecccc
Confidence            4456799999999999998889999999987642 11 1100111122222   11222222222222    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+|.+++..       +..+++...+.++.|++.-+..||...++|.||.
T Consensus       779 Gtlld~~N~-------~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiK  821 (974)
T KOG1166|consen  779 GTLLDLINT-------NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIK  821 (974)
T ss_pred             ccHHHhhcc-------CCCCCchhhhHHHHHHHHHHHHHHhcceecccCC
Confidence            999999973       5669999999999999999999999999999984

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.05  E-value=1.7e-09  Score=73.88  Aligned_cols=106  Identities=9%  Similarity=0.007  Sum_probs=79.9

Q ss_pred             hhhccccccCceEEEEEeCCCcEEEEEecccCCCChHH----------HHHHHHHHcCCCCCCccccceeeec-------
Q 047548           34 FSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEE----------FINEVACISGTSHVNIVTPLGICCE-------   96 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~----------~~~e~~~l~~l~~~~i~~l~~~~~~-------   96 (156)
                      ..+++|.|+||.||.... .+..+++|++.+.....+.          +.+|+..+..+.|+++......+..       
T Consensus        35 ~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~  113 (232)
T PRK10359         35 TIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLR  113 (232)
T ss_pred             EEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccccccc
Confidence            346899999999999765 4668999999764333321          4678888888899988887665331       


Q ss_pred             ----c-eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           97 ----G-LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        97 ----~-lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                          . ++|||++|.+|.++..           .+.    ....+++.++..+|+.++.|.|+.
T Consensus       114 ~~~~~~lvmEyi~G~tL~~~~~-----------~~~----~~~~~i~~~l~~lH~~gi~H~Dik  162 (232)
T PRK10359        114 YAHTYIMLIEYIEGVELNDMPE-----------ISE----DVKAKIKASIESLHQHGMVSGDPH  162 (232)
T ss_pred             ccCCeEEEEEEECCccHHHhhh-----------ccH----HHHHHHHHHHHHHHHcCCccCCCC
Confidence                1 8999999999977632           222    235689999999999999999985

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.04  E-value=3.5e-10  Score=85.21  Aligned_cols=111  Identities=20%  Similarity=0.302  Sum_probs=88.1

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      .+...+|.|+|+.|-.+.... ....++|++....   .+..+|+.++... +|+|++++.+.+.+.    +++|.+.++
T Consensus       325 ~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~---~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~  401 (612)
T KOG0603|consen  325 EFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA---DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGG  401 (612)
T ss_pred             ccccccCCCCccceeeeeccccccchhheeccccc---cccccccchhhhhcCCCcceeecceecCCceeeeeehhcccc
Confidence            445679999999999998765 7778889887542   2334566555544 899999999999887    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      .+.+.+....       .+ ...+..++++++.++.|||+++++|+|.
T Consensus       402 ell~ri~~~~-------~~-~~e~~~w~~~lv~Av~~LH~~gvvhRDL  441 (612)
T KOG0603|consen  402 ELLRRIRSKP-------EF-CSEASQWAAELVSAVDYLHEQGVVHRDL  441 (612)
T ss_pred             HHHHHHHhcc-------hh-HHHHHHHHHHHHHHHHHHHhcCeeecCC
Confidence            9988886532       23 3677789999999999999999999996

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.02  E-value=1.3e-09  Score=81.35  Aligned_cols=115  Identities=14%  Similarity=0.108  Sum_probs=91.3

Q ss_pred             hhhhccccccCceEEEEEeCCCcEEEEEecccCCCCh---HHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG---EEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .+.++||.|+.+.||++...+...+|+|.......+.   ..+..|+.+|..+ .|.+|+.++++-...    +|||+-+
T Consensus       364 eilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~Gd  443 (677)
T KOG0596|consen  364 EILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECGD  443 (677)
T ss_pred             hHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeeccc
Confidence            4457899999999999988776777766554433333   5799999999999 679999999887766    8888774


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      - +|.++|++..      .-++...+..+-.|++.++.++|..+++|=|+
T Consensus       444 ~-DL~kiL~k~~------~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDL  486 (677)
T KOG0596|consen  444 I-DLNKILKKKK------SIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDL  486 (677)
T ss_pred             c-cHHHHHHhcc------CCCchHHHHHHHHHHHHHHHHHHHhceeecCC
Confidence            4 9999998763      22333477888899999999999999999775

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.00  E-value=6.8e-10  Score=86.06  Aligned_cols=111  Identities=22%  Similarity=0.274  Sum_probs=83.9

Q ss_pred             hccccccCce-EEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCCCCChH
Q 047548           36 DKVRQGGYGV-VYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMSNGSLH  109 (156)
Q Consensus        36 ~~lg~g~~g~-v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~~g~L~  109 (156)
                      +++|.|+-|+ ||+|.+. ++.||||.+...  ...-..+|+..+..- .|+|++++++.-.+.    +..|.|. .+|.
T Consensus       515 eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e--~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~-~sL~  590 (903)
T KOG1027|consen  515 EILGYGSNGTVVFRGVYE-GREVAVKRLLEE--FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA-CSLQ  590 (903)
T ss_pred             HHcccCCCCcEEEEEeeC-CceehHHHHhhH--hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-hhHH
Confidence            5788988876 8888875 779999987543  224567899999877 799999998876665    6778774 4999


Q ss_pred             HHhhhcCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          110 KFIYDKGSMSTKNNRLEW-TTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       110 ~~l~~~~~~~~~~~~~~~-~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +++...+.    ...... -....+..|++.||++||+..++|+|+
T Consensus       591 dlie~~~~----d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDL  632 (903)
T KOG1027|consen  591 DLIESSGL----DVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDL  632 (903)
T ss_pred             HHHhcccc----chhhcccccHHHHHHHHHHHHHHHHhcccccccC
Confidence            99987411    111111 445677899999999999999999996

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.00  E-value=5.1e-09  Score=70.51  Aligned_cols=106  Identities=9%  Similarity=-0.078  Sum_probs=76.1

Q ss_pred             hhhccccccCceEEEEEeCCCcEEEEEecccCCCC-----hHHHHHHHHHHcCCC-CCCccccceeeecceeeecCCCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGN-----GEEFINEVACISGTS-HVNIVTPLGICCEGLVYEFMSNGS  107 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~-----~~~~~~e~~~l~~l~-~~~i~~l~~~~~~~lv~e~~~~g~  107 (156)
                      ....|+.++||.|+.+.. ++.+++.+.+.....-     ...+.+|+.++..+. +++++.++++....++++|++|.+
T Consensus         6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~~~lvmeyI~G~~   84 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWDGRHLDRSYLAGAA   84 (218)
T ss_pred             cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcCEEEEEeeecCcc
Confidence            345899999999997654 4666665655543211     124778999999995 477888776522229999999988


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      |.+.+..             . ...++.|++.++.++|+++++|+|+
T Consensus        85 L~~~~~~-------------~-~~~~~~qi~~~L~~lH~~GIvHrDL  117 (218)
T PRK12274         85 MYQRPPR-------------G-DLAYFRAARRLLQQLHRCGVAHNDL  117 (218)
T ss_pred             HHhhhhh-------------h-hHHHHHHHHHHHHHHHHCcCccCCC
Confidence            8653311             1 1346788999999999999999998

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.98  E-value=3.4e-09  Score=75.08  Aligned_cols=117  Identities=19%  Similarity=0.206  Sum_probs=90.3

Q ss_pred             hhhhhhhccccccCceEEEEE-eCCCcEEEEEecccCCCChHHHHHHHHHHcCCC-CCCccccceeeecc----eeeecC
Q 047548           30 MTNSFSDKVRQGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEFINEVACISGTS-HVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~-~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      ....++++||+|+||.++.|. +-.++.||+|.-.. ..+.-.+..|-+.++.+. .+.|+..+-+-..+    +|+|++
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL  106 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL  106 (449)
T ss_pred             ccceeccccccCcceeeecccccccCceEEEEeccc-cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence            445677899999999999997 33488999996432 123345777888888774 46666654443333    899988


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                       |.+|.+++.-.      .+.++.++.+.++.|++.-+.|+|+++.+=+||
T Consensus       107 -GPSLEDLFD~C------gR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDI  150 (449)
T KOG1165|consen  107 -GPSLEDLFDLC------GRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDI  150 (449)
T ss_pred             -CcCHHHHHHHh------cCcccHHhHHHHHHHHHHHHHHHHhcceeeccc
Confidence             88999998765      566999999999999999999999999888887

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.93  E-value=6.7e-09  Score=68.94  Aligned_cols=112  Identities=16%  Similarity=0.163  Sum_probs=70.7

Q ss_pred             hhccccccCceEEEEEeCCCcEEEEEecccCCCCh---HHH----------------------HHHHHHHcCCCCC--Cc
Q 047548           35 SDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG---EEF----------------------INEVACISGTSHV--NI   87 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~---~~~----------------------~~e~~~l~~l~~~--~i   87 (156)
                      .+.||+|+||.||++...++..+++|++.......   ...                      ..|...+..+.+.  .+
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            35789999999999987778899999887532211   111                      2344444443222  23


Q ss_pred             cccceeeecceeeecCCCCChHH-HhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcccc
Q 047548           88 VTPLGICCEGLVYEFMSNGSLHK-FIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA-VATLGLCIS  155 (156)
Q Consensus        88 ~~l~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~-~~~~h~~i~  155 (156)
                      .+..+....-+++||++++++.. .+...      .  . ......++.+++.++.++|+ .++.|+|+.
T Consensus        82 ~~~~~~~~~~lv~e~~~g~~~~~~~l~~~------~--~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~  142 (187)
T cd05119          82 PKPIDLNRHVLVMEFIGGDGIPAPRLKDV------R--L-LEDPEELYDQILELMRKLYREAGLVHGDLS  142 (187)
T ss_pred             CceEecCCCEEEEEEeCCCCccChhhhhh------h--h-cccHHHHHHHHHHHHHHHhhccCcCcCCCC
Confidence            33332211119999999865432 12111      0  1 15567889999999999999 999999974

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=98.88  E-value=5.1e-10  Score=83.00  Aligned_cols=113  Identities=19%  Similarity=0.188  Sum_probs=92.5

Q ss_pred             hhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           35 SDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      ...||-|+||.|-...... ...+|+|+++..    ....+....|-.++...+++.|++++-.+.+.    ++||-|-|
T Consensus       425 iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClG  504 (732)
T KOG0614|consen  425 IATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLG  504 (732)
T ss_pred             hhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcC
Confidence            3479999999999888765 335788888752    22335678888899999999999999888887    88899999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      |+++..++..+       .+.......++..+++|++|||+++++=+|+
T Consensus       505 GElWTiLrdRg-------~Fdd~tarF~~acv~EAfeYLH~k~iIYRDL  546 (732)
T KOG0614|consen  505 GELWTILRDRG-------SFDDYTARFYVACVLEAFEYLHRKGIIYRDL  546 (732)
T ss_pred             chhhhhhhhcC-------CcccchhhhhHHHHHHHHHHHHhcCceeccC
Confidence            99999998754       3677777888899999999999999988775

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.86  E-value=9.8e-10  Score=75.59  Aligned_cols=116  Identities=21%  Similarity=0.255  Sum_probs=87.7

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCC--ChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCCCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG--NGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMSNGS  107 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~~g~  107 (156)
                      ..+|.|+||+|++..++. +..+|||.+.....  +.+++..|......- ..+||++++|.+...    +-||++.- +
T Consensus        70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~-S  148 (361)
T KOG1006|consen   70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI-S  148 (361)
T ss_pred             HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-h
Confidence            378999999999999876 89999999986443  336788888766655 789999999988776    88888854 5


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV-ATLGLCI  154 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~-~~~h~~i  154 (156)
                      +..+-+.-.  +......++..+..+....+.||+||-.. .++|+|+
T Consensus       149 lDklYk~vy--~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDv  194 (361)
T KOG1006|consen  149 LDKLYKRVY--SVQKSRIPENILGHITVATVDALDYLKEELKIIHRDV  194 (361)
T ss_pred             HHHHHHHHH--HHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccC
Confidence            554433100  00134477888888888899999999765 7889887

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.74  E-value=2.7e-07  Score=65.18  Aligned_cols=116  Identities=25%  Similarity=0.395  Sum_probs=93.1

Q ss_pred             hhhccccccCceEEEEEeCCCcEEEEEecccCCC----ChHHHHHHHHHHcCCCCC-Cccccceeeecc----eeeecCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMG----NGEEFINEVACISGTSHV-NIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~-~i~~l~~~~~~~----lv~e~~~  104 (156)
                      +...+|.|+|+.||.+...  ..+++|.+.....    ....+.+|+..+..+.++ +++++...+...    ++++++.
T Consensus         4 ~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~   81 (384)
T COG0515           4 ILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVD   81 (384)
T ss_pred             eEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCC
Confidence            3457899999999999876  6778888875332    235788999999999887 699988887554    8999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++.+++.....    ...++......+..|++.++.|+|+.++.|+|+.
T Consensus        82 ~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~k  128 (384)
T COG0515          82 GGSLEDLLKKIGR----KGPLSESEALFILAQILSALEYLHSKGIIHRDIK  128 (384)
T ss_pred             CCcHHHHHHhccc----ccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence            9999977765320    0257888999999999999999999999999974

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=98.72  E-value=1.7e-08  Score=75.29  Aligned_cols=127  Identities=15%  Similarity=0.168  Sum_probs=96.7

Q ss_pred             ChHHHHhhhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCC------Cccccceeee
Q 047548           23 NYSDVKKMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHV------NIVTPLGICC   95 (156)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~------~i~~l~~~~~   95 (156)
                      .+.++-..++.+....|+|-|++|..|.... +..||+|+|.....-.+.=+.|+.+|..+...      +.+.++..|.
T Consensus       425 ~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~  504 (752)
T KOG0670|consen  425 RIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK  504 (752)
T ss_pred             ehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh
Confidence            3344544555555667999999999998765 88999999986532235567889999887432      4555555444


Q ss_pred             cc----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548           96 EG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus        96 ~~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      ..    +|||.+.- +|.+.|+..+.    +..+.......++.|+..+|.+|-.-+++|-||
T Consensus       505 hknHLClVFE~Lsl-NLRevLKKyG~----nvGL~ikaVRsYaqQLflALklLK~c~vlHaDI  562 (752)
T KOG0670|consen  505 HKNHLCLVFEPLSL-NLREVLKKYGR----NVGLHIKAVRSYAQQLFLALKLLKKCGVLHADI  562 (752)
T ss_pred             hcceeEEEehhhhc-hHHHHHHHhCc----ccceeehHHHHHHHHHHHHHHHHHhcCeeeccc
Confidence            43    89998755 89999988664    677888888999999999999999999999887

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.64  E-value=5.2e-07  Score=62.47  Aligned_cols=107  Identities=8%  Similarity=0.052  Sum_probs=75.0

Q ss_pred             hccc-cccCceEEEEEeCCCcEEEEEecccCC--------------CChHHHHHHHHHHcCCCCCCc--cccceeeec--
Q 047548           36 DKVR-QGGYGVVYRGKLHEGRVAAVKVLSESM--------------GNGEEFINEVACISGTSHVNI--VTPLGICCE--   96 (156)
Q Consensus        36 ~~lg-~g~~g~v~~~~~~~~~~~a~k~~~~~~--------------~~~~~~~~e~~~l~~l~~~~i--~~l~~~~~~--   96 (156)
                      ..+| .|+.|++|..... +..+++|......              .....+.+|..++..+.++++  +...+....  
T Consensus        37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            4687 7899999988765 5677777764311              111457889999999877664  444443221  


Q ss_pred             -----c-eeeecCCC-CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           97 -----G-LVYEFMSN-GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        97 -----~-lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                           . +++|++++ .+|.+++...        .++..    .+.+++.++.++|+.++.|+|+.
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~~~--------~l~~~----~~~~i~~~l~~lH~~GI~HrDlk  169 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQEA--------PLSEE----QWQAIGQLIARFHDAGVYHADLN  169 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHhcC--------CCCHH----HHHHHHHHHHHHHHCCCCCCCCC
Confidence                 1 89999997 6888887532        23333    35689999999999999999985

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.63  E-value=2.7e-07  Score=58.53  Aligned_cols=104  Identities=15%  Similarity=0.096  Sum_probs=78.1

Q ss_pred             hccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCC--CCccccceeeecc----eeeecCCCCChH
Q 047548           36 DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSH--VNIVTPLGICCEG----LVYEFMSNGSLH  109 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~l~~~~~~~----lv~e~~~~g~L~  109 (156)
                      +.+++|.++.||++...+ ..+++|....... ...+..|..++..+.+  ..++++.......    +++||++++.+.
T Consensus         4 ~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~   81 (155)
T cd05120           4 KLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLD   81 (155)
T ss_pred             eecccccccceEEEEecC-CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecc
Confidence            468999999999998754 6788898765433 4567788888888865  4777777666542    899999886654


Q ss_pred             HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc---CCCCcccc
Q 047548          110 KFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV---ATLGLCIS  155 (156)
Q Consensus       110 ~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~---~~~h~~i~  155 (156)
                      .+              +......++.+++.++.++|..   .+.|.|+.
T Consensus        82 ~~--------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~  116 (155)
T cd05120          82 EV--------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLH  116 (155)
T ss_pred             cC--------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCC
Confidence            32              3456677889999999999985   48888864

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=98.53  E-value=2e-07  Score=65.76  Aligned_cols=91  Identities=25%  Similarity=0.357  Sum_probs=72.2

Q ss_pred             CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----------eeeecCCCCChHHHhhhcCCCCC
Q 047548           54 GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----------LVYEFMSNGSLHKFIYDKGSMST  120 (156)
Q Consensus        54 ~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------lv~e~~~~g~L~~~l~~~~~~~~  120 (156)
                      +..|++|.......   ..+...+|..++..+.|+|++++...+...          +++|++.. +|.+.+.-.     
T Consensus        41 ~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~-nl~~vi~~e-----  114 (369)
T KOG0665|consen   41 GRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDA-NLCQVILME-----  114 (369)
T ss_pred             cCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhhh-HHHHHHHHh-----
Confidence            56667665543222   236678999999999999999999988765          89999965 888888632     


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          121 KNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       121 ~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                          +.=..+..++.|++.|+.|||+.++.|+|+
T Consensus       115 ----lDH~tis~i~yq~~~~ik~lhs~~IihRdL  144 (369)
T KOG0665|consen  115 ----LDHETISYILYQMLCGIKHLHSAGIIHRDL  144 (369)
T ss_pred             ----cchHHHHHHHHHHHHHHHHHHhcceeeccc
Confidence                445677889999999999999999999985

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.32  E-value=4.1e-06  Score=62.90  Aligned_cols=110  Identities=18%  Similarity=0.163  Sum_probs=67.4

Q ss_pred             ccccccCceEEEEEeCCCcEEEEEecccCCCCh--H---------------------------------------HHHHH
Q 047548           37 KVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG--E---------------------------------------EFINE   75 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~--~---------------------------------------~~~~e   75 (156)
                      -+|+|++|+||+|..++|..||+|+.++.....  .                                       ++.+|
T Consensus       124 plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~E  203 (437)
T TIGR01982       124 PLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRRE  203 (437)
T ss_pred             ceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHH
Confidence            599999999999999889999999987642110  0                                       12223


Q ss_pred             HHHHcCC----CCCCccccceee---ecc--eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHH-HHHHHH
Q 047548           76 VACISGT----SHVNIVTPLGIC---CEG--LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVAR-GLECLI  145 (156)
Q Consensus        76 ~~~l~~l----~~~~i~~l~~~~---~~~--lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~-gl~yLH  145 (156)
                      ...+..+    .+.+-+.+...+   ...  ++|||++|+++.+......      ....   ...++..++. .+..+|
T Consensus       204 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~------~~~~---~~~ia~~~~~~~l~ql~  274 (437)
T TIGR01982       204 AANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE------AGLD---RKALAENLARSFLNQVL  274 (437)
T ss_pred             HHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh------cCCC---HHHHHHHHHHHHHHHHH
Confidence            3323222    222222222222   222  9999999999988765321      1112   2334555544 467889


Q ss_pred             hcCCCCcccc
Q 047548          146 AVATLGLCIS  155 (156)
Q Consensus       146 ~~~~~h~~i~  155 (156)
                      ..+..|.|+.
T Consensus       275 ~~g~~H~D~h  284 (437)
T TIGR01982       275 RDGFFHADLH  284 (437)
T ss_pred             hCCceeCCCC
Confidence            9999999863

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.20  E-value=1e-05  Score=53.43  Aligned_cols=115  Identities=18%  Similarity=0.194  Sum_probs=74.8

Q ss_pred             hccccccCceEEEEEeCCCcEEEEEecccC-----C----CChHHHHHHHHHHcCCCCCCcc--ccceeeecc--eeeec
Q 047548           36 DKVRQGGYGVVYRGKLHEGRVAAVKVLSES-----M----GNGEEFINEVACISGTSHVNIV--TPLGICCEG--LVYEF  102 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~-----~----~~~~~~~~e~~~l~~l~~~~i~--~l~~~~~~~--lv~e~  102 (156)
                      ..+-+|+-+.|+.+.+. |+...+|.-...     .    ...+...+|++++..+.-..|.  .++.+-...  +.|||
T Consensus        13 ~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~   91 (229)
T KOG3087|consen   13 ELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEF   91 (229)
T ss_pred             eeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEe
Confidence            46788998899998876 555555543321     1    1114567788887765432222  222211111  99999


Q ss_pred             CCC-CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccC
Q 047548          103 MSN-GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIST  156 (156)
Q Consensus       103 ~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~~  156 (156)
                      +++ .++.+++...-     ...........++..+-+.+.-||.+.+.|.|.+|
T Consensus        92 ~~g~~~vk~~i~~~~-----~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTT  141 (229)
T KOG3087|consen   92 IDGASTVKDFILSTM-----EDESEDEGLAELARRIGELIGKLHDNDIIHGDLTT  141 (229)
T ss_pred             ccchhHHHHHHHHHc-----cCcccchhHHHHHHHHHHHHHHhhhCCeecccccc
Confidence            987 47777776542     22233444578999999999999999999999987

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.20  E-value=1.5e-05  Score=53.98  Aligned_cols=105  Identities=15%  Similarity=0.179  Sum_probs=76.8

Q ss_pred             ccccccCceEEEEEeCCCcEEEEEecccCCC--ChHHHHHHHHHHcCCCC--CCccccceeeec-----c--eeeecCCC
Q 047548           37 KVRQGGYGVVYRGKLHEGRVAAVKVLSESMG--NGEEFINEVACISGTSH--VNIVTPLGICCE-----G--LVYEFMSN  105 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~--~~i~~l~~~~~~-----~--lv~e~~~~  105 (156)
                      .++.|..+.+|+....++..+++|.......  ....+..|..++..+.+  .++++++.....     .  +++||+++
T Consensus         5 ~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G   84 (223)
T cd05154           5 QLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDG   84 (223)
T ss_pred             ecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCC
Confidence            5789999999999876567889998765432  23567888888888754  345555555443     2  89999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVAT  149 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~  149 (156)
                      .++.+.+..        ...+......++.++++.|..||+...
T Consensus        85 ~~l~~~~~~--------~~~~~~~~~~i~~~i~~~l~~lH~~~~  120 (223)
T cd05154          85 RVLRDRLLR--------PELSPEERRALARALADTLAALHSVDP  120 (223)
T ss_pred             EecCCCCCC--------CCCCHHHHHHHHHHHHHHHHHHhCCCh
Confidence            877665421        225667788899999999999998654

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.16  E-value=1.7e-06  Score=69.48  Aligned_cols=51  Identities=6%  Similarity=0.031  Sum_probs=43.4

Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|++ .++|.+++...      ...++...+..++.||+.||.|||+++++|+||-
T Consensus        57 ~~~e~~-~~~L~~~l~~~------~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlK  107 (793)
T PLN00181         57 RALECE-DVSLRQWLDNP------DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVR  107 (793)
T ss_pred             hhhccC-CccHHHHHhcc------cccccHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence            667776 55999999753      3448889999999999999999999999999984

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.14  E-value=2.4e-06  Score=66.36  Aligned_cols=113  Identities=19%  Similarity=0.172  Sum_probs=76.5

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecc----cCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLS----ESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~----~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ....+|.|++|.++...... ....+.|...    ......   ..+..|..+-..++|++++.....+...    -.||
T Consensus       322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE  401 (601)
T KOG0590|consen  322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME  401 (601)
T ss_pred             ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence            34578999999766665322 2222222211    111111   1244555555677999988766655554    4589


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      |+++ +|+.++...       ..++...+-.++.|+..|+.|+|+.++.|+|+
T Consensus       402 ~~~~-Dlf~~~~~~-------~~~~~~e~~c~fKqL~~Gv~y~h~~Giahrdl  446 (601)
T KOG0590|consen  402 YCPY-DLFSLVMSN-------GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDL  446 (601)
T ss_pred             cccH-HHHHHHhcc-------cccchhhhhHHHHHHHHHHHHHHhcCceeccC
Confidence            9999 999998752       24778888899999999999999999999986

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.14  E-value=1.7e-05  Score=51.62  Aligned_cols=103  Identities=15%  Similarity=0.020  Sum_probs=69.1

Q ss_pred             ccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCC-ccccceeeecc--eeeecCCCCChHHHhh
Q 047548           37 KVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVN-IVTPLGICCEG--LVYEFMSNGSLHKFIY  113 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~l~~~~~~~--lv~e~~~~g~L~~~l~  113 (156)
                      .++.|.++.+|++... +..+++|...........+..|..++..+.... ++++.......  +++||+++.++...  
T Consensus         5 ~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~~--   81 (170)
T cd05151           5 PLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLTE--   81 (170)
T ss_pred             ecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCccccc--
Confidence            5788999999998865 667899987654322234567777777764333 33444443322  99999999876432  


Q ss_pred             hcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-----CCcccc
Q 047548          114 DKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVAT-----LGLCIS  155 (156)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~-----~h~~i~  155 (156)
                       .         ..   ......+++..|+.||+...     .|.|+.
T Consensus        82 -~---------~~---~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~  115 (170)
T cd05151          82 -D---------FS---DPENLEKIAKLLKKLHSSPLPDLVPCHNDLL  115 (170)
T ss_pred             -c---------cc---CHHHHHHHHHHHHHHhCCCCCCceeecCCCC
Confidence             0         11   12346789999999999886     888863

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.00  E-value=6.7e-05  Score=56.77  Aligned_cols=108  Identities=14%  Similarity=0.166  Sum_probs=76.7

Q ss_pred             ceEEEEEeCC-CcEEEEEecccCCCCh-HHHHHHHHHHcCCCCCCccccceeeecc--------eeeecCCC-CChHHHh
Q 047548           44 GVVYRGKLHE-GRVAAVKVLSESMGNG-EEFINEVACISGTSHVNIVTPLGICCEG--------LVYEFMSN-GSLHKFI  112 (156)
Q Consensus        44 g~v~~~~~~~-~~~~a~k~~~~~~~~~-~~~~~e~~~l~~l~~~~i~~l~~~~~~~--------lv~e~~~~-g~L~~~l  112 (156)
                      .+.|++.... |..+++|.++..+... .....-.+.++.+.|+|++++.+++...        ++++|.|. ++|+++.
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~  369 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY  369 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence            3477777543 8899999984322111 1233445678899999999999888743        89999986 5788776


Q ss_pred             hhcCCCC--------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 047548          113 YDKGSMS--------TKNNRLEWTTLSEIVVGVARGLECLIAVATLG  151 (156)
Q Consensus       113 ~~~~~~~--------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h  151 (156)
                      ....+.+        ..+...++..+|.++.|+.-||.++|+.+...
T Consensus       370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAc  416 (655)
T KOG3741|consen  370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLAC  416 (655)
T ss_pred             ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCcee
Confidence            4332211        12445678999999999999999999987543

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=97.98  E-value=9.6e-05  Score=49.63  Aligned_cols=112  Identities=14%  Similarity=0.128  Sum_probs=72.9

Q ss_pred             hccccccCceEEEEEeCC-------CcEEEEEecccCCC----------------------Ch-HH----HHHHHHHHcC
Q 047548           36 DKVRQGGYGVVYRGKLHE-------GRVAAVKVLSESMG----------------------NG-EE----FINEVACISG   81 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-------~~~~a~k~~~~~~~----------------------~~-~~----~~~e~~~l~~   81 (156)
                      ..+|.|.-+.||.+...+       +..+|+|+.+.+..                      +. +.    ..+|...|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            367888889999997542       36889998864210                      11 11    2267777777


Q ss_pred             CC--CCCccccceeeecc-eeeecCCCCChHH-HhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCccccC
Q 047548           82 TS--HVNIVTPLGICCEG-LVYEFMSNGSLHK-FIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL-IAVATLGLCIST  156 (156)
Q Consensus        82 l~--~~~i~~l~~~~~~~-lv~e~~~~g~L~~-~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yL-H~~~~~h~~i~~  156 (156)
                      +.  ..+++..+.. ... ++|||+.+.++.. .++.        ..++......+..+++..|..+ |..+++|.|+++
T Consensus        83 l~~~Gv~vP~pi~~-~~~~lvME~Ig~~~~~~~~Lkd--------~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~  153 (197)
T cd05146          83 MQKAGIPCPEVVVL-KKHVLVMSFIGDDQVPAPKLKD--------AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSE  153 (197)
T ss_pred             HHHcCCCCCeEEEe-cCCEEEEEEcCCCCccchhhhc--------cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence            63  3455555543 223 9999997643321 2221        1244455667789999999998 899999999874

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=97.87  E-value=1.3e-05  Score=65.10  Aligned_cols=115  Identities=15%  Similarity=0.102  Sum_probs=82.5

Q ss_pred             hhhhhccccccCceEEEEEeCCCcEEEEEecccCCCCh-----HHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG-----EEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~-----~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      .++.+.||++.|=+|.+++.+.|. +++|++-......     .+...++. ....++||...+.-.....    ++-+|
T Consensus        25 ~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   25 CHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             eeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            456678999999999999887676 7888886533211     33344444 4455888888776554444    66677


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccC
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIST  156 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~~  156 (156)
                      .. .+|++.+...       ..+......-++.|++.|+.-+|..++-|+||-|
T Consensus       103 vk-hnLyDRlSTR-------PFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKs  148 (1431)
T KOG1240|consen  103 VK-HNLYDRLSTR-------PFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKS  148 (1431)
T ss_pred             Hh-hhhhhhhccc-------hHHHHHHHHHHHHHHHHHHHHHHHcCcccccccc
Confidence            74 4999988642       2245556666889999999999999999999854

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=97.83  E-value=3.9e-05  Score=57.93  Aligned_cols=64  Identities=20%  Similarity=0.442  Sum_probs=56.8

Q ss_pred             cCCCCCCccccceeeecc----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 047548           80 SGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVAT  149 (156)
Q Consensus        80 ~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~  149 (156)
                      +.+.|.|+.++.|.+.++    .+.+|+..|+|.+.+...      ...+++.....+.++++.||.|+|+..+
T Consensus         2 ~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~------~~~~d~~F~~s~~rdi~~Gl~ylh~s~i   69 (484)
T KOG1023|consen    2 RQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE------DIKLDYFFILSFIRDISKGLAYLHNSPI   69 (484)
T ss_pred             cccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc------ccCccHHHHHHHHHHHHHHHHHHhcCcc
Confidence            467899999999999988    889999999999999874      5568888899999999999999998766

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.68  E-value=0.00037  Score=53.68  Aligned_cols=29  Identities=28%  Similarity=0.368  Sum_probs=26.4

Q ss_pred             ccccccCceEEEEEeCC-CcEEEEEecccC
Q 047548           37 KVRQGGYGVVYRGKLHE-GRVAAVKVLSES   65 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~   65 (156)
                      -+|+|++|+|+++..++ |+.||+|++.+.
T Consensus       126 PlasaSiaQVh~A~l~~~G~~VAVKV~rP~  155 (537)
T PRK04750        126 PLASASIAQVHFARLKDNGREVVVKVLRPD  155 (537)
T ss_pred             hhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence            58999999999999987 999999999754

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.63  E-value=0.00076  Score=44.76  Aligned_cols=105  Identities=15%  Similarity=0.155  Sum_probs=71.7

Q ss_pred             ccccccCceEEEEEeCCCcEEEEEeccc-C----CCCh----HHHHHHHHHHcCCCC--CCccccceeeecc--eeeecC
Q 047548           37 KVRQGGYGVVYRGKLHEGRVAAVKVLSE-S----MGNG----EEFINEVACISGTSH--VNIVTPLGICCEG--LVYEFM  103 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~~~~~a~k~~~~-~----~~~~----~~~~~e~~~l~~l~~--~~i~~l~~~~~~~--lv~e~~  103 (156)
                      .+.+|+-+.++...+.+ ..+.+|.-.+ .    ..+.    ....+|..++..+..  -+.+-++.+....  ++|||+
T Consensus         3 ~i~~GAEa~i~~~~~~g-~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I   81 (204)
T COG3642           3 LIKQGAEAIIYLTDFLG-LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI   81 (204)
T ss_pred             hhhCCcceeEEeeeccC-cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence            46788888888887653 3345554322 1    1111    346678888887643  3444455554444  999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccC
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIST  156 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~~  156 (156)
                      +|..|.+.+...              ...++..+-.-+.-||...++|.|++|
T Consensus        82 ~G~~lkd~l~~~--------------~~~~~r~vG~~vg~lH~~givHGDLTt  120 (204)
T COG3642          82 EGELLKDALEEA--------------RPDLLREVGRLVGKLHKAGIVHGDLTT  120 (204)
T ss_pred             CChhHHHHHHhc--------------chHHHHHHHHHHHHHHhcCeecCCCcc
Confidence            998888777531              256778888889999999999999987

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.46  E-value=5.4e-05  Score=54.30  Aligned_cols=66  Identities=20%  Similarity=0.246  Sum_probs=53.2

Q ss_pred             CCCCCCccccceeeecc---------eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 047548           81 GTSHVNIVTPLGICCEG---------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVAT  149 (156)
Q Consensus        81 ~l~~~~i~~l~~~~~~~---------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~  149 (156)
                      .+.|.|++++..++.+.         ++.||+..|++.++|++....   ...+......+++.||..||.|||+-..
T Consensus       123 qlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~---~~a~~~~~wkkw~tqIlsal~yLhs~~P  197 (458)
T KOG1266|consen  123 QLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN---QKALFQKAWKKWCTQILSALSYLHSCDP  197 (458)
T ss_pred             HHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh---hhhhhHHHHHHHHHHHHhhhhhhhccCC
Confidence            34688899888777654         889999999999999874321   4557778889999999999999998743

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=97.36  E-value=0.00034  Score=51.61  Aligned_cols=64  Identities=16%  Similarity=0.191  Sum_probs=47.6

Q ss_pred             CCCCccccceeeecc-------------------------------eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHH
Q 047548           83 SHVNIVTPLGICCEG-------------------------------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLS  131 (156)
Q Consensus        83 ~~~~i~~l~~~~~~~-------------------------------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~  131 (156)
                      +||||++..+.|.+.                               ++|...+ .+|.+++...        ..+.....
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~--------~~s~r~~~  344 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR--------HRSYRTGR  344 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC--------CCchHHHH
Confidence            699999998887764                               3333332 2666666532        24566677


Q ss_pred             HHHHHHHHHHHHHHhcCCCCcccc
Q 047548          132 EIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       132 ~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      -+..|+++|+.|||.+.+.|+|.-
T Consensus       345 ~~laQlLEav~hL~~hgvAhRDlK  368 (598)
T KOG4158|consen  345 VILAQLLEAVTHLHKHGVAHRDLK  368 (598)
T ss_pred             HHHHHHHHHHHHHHHccchhhccc
Confidence            788999999999999999999964

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.34  E-value=0.012  Score=41.59  Aligned_cols=114  Identities=15%  Similarity=-0.023  Sum_probs=68.5

Q ss_pred             ccccccCceEEEEEeCCCcEEEEEecccCC------------CChHHHHHHHHHHcCCC--CCCccccceeeec------
Q 047548           37 KVRQGGYGVVYRGKLHEGRVAAVKVLSESM------------GNGEEFINEVACISGTS--HVNIVTPLGICCE------   96 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~------------~~~~~~~~e~~~l~~l~--~~~i~~l~~~~~~------   96 (156)
                      ++-+.....|.+..+ +|..+.+|......            .....+.+|...+..+.  .-..+....+...      
T Consensus        29 ~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~  107 (268)
T PRK15123         29 VFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT  107 (268)
T ss_pred             EEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence            333333334555544 35667778653321            00113567777666552  2223333222221      


Q ss_pred             --c-eeeecCCCC-ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccC
Q 047548           97 --G-LVYEFMSNG-SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIST  156 (156)
Q Consensus        97 --~-lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~~  156 (156)
                        . +++|++++. +|.+++....     ...........++.+++..+.-||..++.|.|.++
T Consensus       108 ~~s~LVte~l~~~~sL~~~~~~~~-----~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~  166 (268)
T PRK15123        108 RTSFIITEDLAPTISLEDYCADWA-----TNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYI  166 (268)
T ss_pred             ceeEEEEeeCCCCccHHHHHHhhc-----ccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCCh
Confidence              1 999999886 7888875321     12244566678899999999999999999999864

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=97.23  E-value=0.00076  Score=47.92  Aligned_cols=121  Identities=19%  Similarity=0.192  Sum_probs=68.1

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCC---C-------Cccccceeeec--
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSH---V-------NIVTPLGICCE--   96 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~---~-------~i~~l~~~~~~--   96 (156)
                      .++.||.|.++.||.+.... ++.+++|+......    ..+.+.+|.-....+.+   +       .++-..+...-  
T Consensus        16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~   95 (288)
T PF14531_consen   16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG   95 (288)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred             EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence            45689999999999999876 89999998864332    22455555544433211   1       11111111110  


Q ss_pred             -----------------c--eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           97 -----------------G--LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        97 -----------------~--lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                                       .  +++.-+ .++|.+++..-...+..+......-.+.+..|+++-+++||+.+++|.||.
T Consensus        96 ~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~  172 (288)
T PF14531_consen   96 KPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK  172 (288)
T ss_dssp             S-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred             CCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence                             1  445444 458877764210000001112233445556899999999999999999985

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=97.18  E-value=8.5e-05  Score=56.93  Aligned_cols=111  Identities=17%  Similarity=0.168  Sum_probs=82.7

Q ss_pred             ccccccCceEEEEEeC---C-CcEEEEEecccCCC---ChHHHHHHHHHHcCCC-CCCccccceeeecc----eeeecCC
Q 047548           37 KVRQGGYGVVYRGKLH---E-GRVAAVKVLSESMG---NGEEFINEVACISGTS-HVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~---~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~-~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      ++|+|+||.|+.+..-   + +..+++|+++....   .......|..++..++ ++.++++...+...    ++.++.-
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            4789999998876531   2 67778888765221   1123455666777775 89999999888877    8889998


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +|++...+...       ..++......+...++.+++++|...+.++|+
T Consensus        81 gg~lft~l~~~-------~~f~~~~~~~~~aelaLald~lh~l~iiyrd~  123 (612)
T KOG0603|consen   81 GGDLFTRLSKE-------VMFDELDVAFYLAELALALDHLHKLGIAYRDY  123 (612)
T ss_pred             cchhhhccccC-------CchHHHHHHHHHHHHHHHHhhcchhHHHHhcc
Confidence            99988777653       33566777778888999999999999888876

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.01  E-value=0.0041  Score=41.57  Aligned_cols=102  Identities=17%  Similarity=0.136  Sum_probs=59.7

Q ss_pred             EEEEEeCCCcEEEEEecccCC--------------C--------Ch-----HHHHHHHHHHcCCCCC--Cccccceeeec
Q 047548           46 VYRGKLHEGRVAAVKVLSESM--------------G--------NG-----EEFINEVACISGTSHV--NIVTPLGICCE   96 (156)
Q Consensus        46 v~~~~~~~~~~~a~k~~~~~~--------------~--------~~-----~~~~~e~~~l~~l~~~--~i~~l~~~~~~   96 (156)
                      ||.|...++..+|+|..+...              .        ..     ....+|...|..+...  ++++.+.....
T Consensus         2 Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~~~   81 (188)
T PF01163_consen    2 VYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYNRN   81 (188)
T ss_dssp             EEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEETT
T ss_pred             EEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEeCC
Confidence            788887778889999876410              0        01     2356788888888543  56666544322


Q ss_pred             ceeeecCC--CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHhcCCCCccccC
Q 047548           97 GLVYEFMS--NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLEC-LIAVATLGLCIST  156 (156)
Q Consensus        97 ~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~y-LH~~~~~h~~i~~  156 (156)
                      -++|||++  +..+.. +...        .++......++.+++..+.. +|..+++|.|.++
T Consensus        82 ~ivME~I~~~G~~~~~-l~~~--------~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~  135 (188)
T PF01163_consen   82 VIVMEYIGEDGVPLPR-LKDV--------DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSE  135 (188)
T ss_dssp             EEEEE--EETTEEGGC-HHHC--------GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-ST
T ss_pred             EEEEEecCCCccchhh-HHhc--------cccchhHHHHHHHHHHHHHHHHHhcCceecCCCh
Confidence            29999998  544433 3321        12234445667777775555 5899999999874

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=96.78  E-value=0.0055  Score=40.58  Aligned_cols=77  Identities=17%  Similarity=0.177  Sum_probs=54.2

Q ss_pred             hhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccc-cceeeecceeeecCCCCChHHHhh
Q 047548           35 SDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVT-PLGICCEGLVYEFMSNGSLHKFIY  113 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~-l~~~~~~~lv~e~~~~g~L~~~l~  113 (156)
                      ...|++|.+|.||.+.+.++ .+++|.-.. ......+..|+.++..+....+.. ++.+....+.|||+.|-.|.++-.
T Consensus        27 ~~~L~KG~~s~Vyl~~~~~~-~~a~Kvrr~-ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~~i~me~i~G~~L~~~~~  104 (201)
T COG2112          27 EKELAKGTTSVVYLGEWRGG-EVALKVRRR-DSPRRNLEKEAKILEILAGEGVTPEVYFYGEDFIRMEYIDGRPLGKLEI  104 (201)
T ss_pred             hhhhhcccccEEEEeeccCc-eEEEEEecC-CcchhhHHHHHHHHHHhhhcCCCceEEEechhhhhhhhhcCcchhhhhh
Confidence            45799999999999998744 677776543 224467889999998887665554 333222227799998878776543

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=96.62  E-value=0.0005  Score=53.78  Aligned_cols=118  Identities=18%  Similarity=0.134  Sum_probs=83.9

Q ss_pred             hhhhhccccccCceEEEEEeCC--CcEEEEEecccCCCCh---HHHHHHHHHHcCCC-CCCccccceeeecc----eeee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE--GRVAAVKVLSESMGNG---EEFINEVACISGTS-HVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~--~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~-~~~i~~l~~~~~~~----lv~e  101 (156)
                      ..+.+.+|+|+|+.+.......  ...++++.+.......   .....|..+-..+. |.|++...+.....    +..+
T Consensus        22 ~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~  101 (601)
T KOG0590|consen   22 YKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLS  101 (601)
T ss_pred             ccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccC
Confidence            3455678999999988776533  4455666555433221   23344555555554 99999998887776    8889


Q ss_pred             cCCCCChHHHh-hhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCcccc
Q 047548          102 FMSNGSLHKFI-YDKGSMSTKNNRLEWTTLSEIVVGVARGLECLI-AVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l-~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH-~~~~~h~~i~  155 (156)
                      +..++++...+ ...      ....+....-.++.|+..++.|+| ...+.|+||.
T Consensus       102 ~s~g~~~f~~i~~~~------~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ik  151 (601)
T KOG0590|consen  102 YSDGGSLFSKISHPD------STGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIK  151 (601)
T ss_pred             cccccccccccccCC------ccCCCCcchhhhhhhhccCccccCcccccccCCCC
Confidence            99999998887 332      114556667778999999999999 9899999874

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=96.60  E-value=0.0018  Score=49.53  Aligned_cols=114  Identities=16%  Similarity=0.115  Sum_probs=76.7

Q ss_pred             hhccccccCceEEEEEeCC--CcEEEEEecccCCCCh---HHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCC
Q 047548           35 SDKVRQGGYGVVYRGKLHE--GRVAAVKVLSESMGNG---EEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~--~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      ...+|.+.|+.++.+..+.  +..+++|.+.......   ..-..|+.+...+ .|.+.+.+...+...    +..||+.
T Consensus       270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~  349 (524)
T KOG0601|consen  270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCE  349 (524)
T ss_pred             eEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhc
Confidence            3568999999999887552  7788888776532221   1123344444433 455555544333322    7778998


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++...+.-       -..+.+...+.+..|++.++.++|+....|+|+.
T Consensus       350 ~~s~~l~~~~-------~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~  393 (524)
T KOG0601|consen  350 GGSSSLRSVT-------SQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVK  393 (524)
T ss_pred             CcchhhhhHH-------HHhcCcchhhhhHHHHHhccccccchhhhccccc
Confidence            8887766532       2336677888999999999999999999999763

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=96.44  E-value=0.02  Score=44.91  Aligned_cols=89  Identities=20%  Similarity=0.123  Sum_probs=64.1

Q ss_pred             CcEEEEEecccCCCCh-HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCChHHHhhhcCCCCCCCCCCCHH
Q 047548           54 GRVAAVKVLSESMGNG-EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWT  128 (156)
Q Consensus        54 ~~~~a~k~~~~~~~~~-~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~  128 (156)
                      +..+.+...+...... ....+.+.-++.++||+|++++......    ++.|.+.  .|...++..          ...
T Consensus        37 ~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l----------~~~  104 (690)
T KOG1243|consen   37 GGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL----------GKE  104 (690)
T ss_pred             CCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh----------HHH
Confidence            6666666665544322 4466778889999999999999887766    8888774  466666542          255


Q ss_pred             HHHHHHHHHHHHHHHHHh-cCCCCccc
Q 047548          129 TLSEIVVGVARGLECLIA-VATLGLCI  154 (156)
Q Consensus       129 ~~~~i~~~i~~gl~yLH~-~~~~h~~i  154 (156)
                      ...-.+.||+.+|.+||+ .+.+|..+
T Consensus       105 ~v~~Gl~qIl~AL~FL~~d~~lvHgNv  131 (690)
T KOG1243|consen  105 EVCLGLFQILAALSFLNDDCNLVHGNV  131 (690)
T ss_pred             HHHHHHHHHHHHHHHHhccCCeeeccE
Confidence            666677899999999984 47777654

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=96.28  E-value=0.006  Score=46.71  Aligned_cols=117  Identities=18%  Similarity=0.107  Sum_probs=79.9

Q ss_pred             hhhhhcccc--ccCceEEEEEe--CC-CcEEEEEecccCCC---ChHHHHHHHHHHcCC-CCCCccccceeeecc----e
Q 047548           32 NSFSDKVRQ--GGYGVVYRGKL--HE-GRVAAVKVLSESMG---NGEEFINEVACISGT-SHVNIVTPLGICCEG----L   98 (156)
Q Consensus        32 ~~~~~~lg~--g~~g~v~~~~~--~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----l   98 (156)
                      ..+...+|+  |.+|.+|.+.-  +. +..+|+|..+....   ....-.++......+ .|.+.++....+...    +
T Consensus       116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfi  195 (524)
T KOG0601|consen  116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFI  195 (524)
T ss_pred             cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCccee
Confidence            344456888  99999998875  33 67778777543221   222334455545555 578888866666555    4


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHH----HHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVAR----GLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~----gl~yLH~~~~~h~~i~  155 (156)
                      -.|++ +.+|..+....      ...++...++....+...    |+.++|+.++.|-|+.
T Consensus       196 qtE~~-~~sl~~~~~~~------~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~k  249 (524)
T KOG0601|consen  196 QTELC-GESLQSYCHTP------CNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLK  249 (524)
T ss_pred             eeccc-cchhHHhhhcc------cccCCchhhhhHHhhhhhcccccccccCCCcccccccc
Confidence            44544 56777776554      444777888888888888    9999999999998864

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=96.15  E-value=0.052  Score=42.07  Aligned_cols=30  Identities=27%  Similarity=0.375  Sum_probs=26.8

Q ss_pred             hccccccCceEEEEEeCCCcEEEEEecccC
Q 047548           36 DKVRQGGYGVVYRGKLHEGRVAAVKVLSES   65 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~   65 (156)
                      +-|+..+.++|+++..++|+.||+|+.++.
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~  196 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQHPG  196 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecCcC
Confidence            358999999999999999999999999863

>PLN02876 acyl-CoA dehydrogenase

Probab=96.13  E-value=0.073  Score=43.62  Aligned_cols=104  Identities=11%  Similarity=0.156  Sum_probs=68.7

Q ss_pred             hccccccCceEEEEEeCCC---cEEEEEecccCC--CChHHHHHHHHHHcCCC-CCC--ccccceeeecc-------eee
Q 047548           36 DKVRQGGYGVVYRGKLHEG---RVAAVKVLSESM--GNGEEFINEVACISGTS-HVN--IVTPLGICCEG-------LVY  100 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~~---~~~a~k~~~~~~--~~~~~~~~e~~~l~~l~-~~~--i~~l~~~~~~~-------lv~  100 (156)
                      +.++.|.++.+|......+   ..+++|......  .....+.+|..++..+. +.+  +++.+..+.+.       ++|
T Consensus        44 ~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVM  123 (822)
T PLN02876         44 SQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIM  123 (822)
T ss_pred             EEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEE
Confidence            3578888889998776542   356666654322  12246788999998884 444  46666665542       899


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA  148 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~  148 (156)
                      ||+++-.+.+.   .      ....+......++.++++.|+.||+..
T Consensus       124 E~v~G~~~~~~---~------~~~~~~~~r~~l~~~l~~~La~LH~vd  162 (822)
T PLN02876        124 EYLEGRIFVDP---K------LPGVAPERRRAIYRATAKVLAALHSAD  162 (822)
T ss_pred             EecCCcccCCc---c------CCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            99987543211   0      112456667788999999999999854

>PRK10593 hypothetical protein; Provisional

Probab=96.01  E-value=0.067  Score=38.40  Aligned_cols=97  Identities=12%  Similarity=0.074  Sum_probs=64.6

Q ss_pred             ccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCC---CCccccceeeec------c-eeeecCCCC
Q 047548           37 KVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSH---VNIVTPLGICCE------G-LVYEFMSNG  106 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~l~~~~~~------~-lv~e~~~~g  106 (156)
                      .|++|..+.||.....++. +.+|..+. ......+..|...+..+..   ..++++++.+..      . ++||++++.
T Consensus        21 ~i~~G~~~~vy~~~~~~~~-~~~k~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~   98 (297)
T PRK10593         21 CISEQPYAALWALYDSQGN-PMPLMARS-FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRGV   98 (297)
T ss_pred             ecCCccceeEEEEEcCCCC-EEEEEecc-cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCCE
Confidence            5899999999998765453 45566332 1133567888888877732   356677765532      1 999999998


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV  147 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~  147 (156)
                      ++.+. .           ........+..+++++|+-||+.
T Consensus        99 ~~~~~-~-----------~~~~~~~~l~~~l~~~La~LH~~  127 (297)
T PRK10593         99 SVEAP-A-----------RTPERWEQLKDQIVEGLLAWHRI  127 (297)
T ss_pred             ecCCC-C-----------CCHHHHHHHHHHHHHHHHHHhCC
Confidence            77541 0           22333455667788999999985

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=95.87  E-value=0.11  Score=36.89  Aligned_cols=111  Identities=17%  Similarity=0.144  Sum_probs=70.6

Q ss_pred             hhhhccccccCceEEEEEeCCCcEEEEEecccCC------------------CCh-----HHHHHHHHHHcCCCCC--Cc
Q 047548           33 SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESM------------------GNG-----EEFINEVACISGTSHV--NI   87 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~------------------~~~-----~~~~~e~~~l~~l~~~--~i   87 (156)
                      .+++.||-|.-+.||.+..+.+.++++|.=+...                  .++     ....+|-.+|..+...  .+
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V  173 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV  173 (304)
T ss_pred             hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence            5667899999999999998888899988643210                  000     2345777788887543  66


Q ss_pred             cccceeeecceeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           88 VTPLGICCEGLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        88 ~~l~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++.++.-..-++||+++|-.|...-            +.......++..|++-+.-.=..+++|.|.+
T Consensus       174 P~P~~~nRHaVvMe~ieG~eL~~~r------------~~~en~~~il~~il~~~~~~~~~GiVHGDlS  229 (304)
T COG0478         174 PKPIAWNRHAVVMEYIEGVELYRLR------------LDVENPDEILDKILEEVRKAYRRGIVHGDLS  229 (304)
T ss_pred             CCccccccceeeeehcccceeeccc------------CcccCHHHHHHHHHHHHHHHHHcCccccCCc
Confidence            6655544333999999987665432            1122223334444444443337889998875

>PRK09902 hypothetical protein; Provisional

Probab=95.79  E-value=0.37  Score=33.00  Aligned_cols=112  Identities=18%  Similarity=0.057  Sum_probs=72.7

Q ss_pred             cccccCceEEEEEeCCCcEEEEEeccc----C---CCChHHHHHHHHHHcCCC--CCCccccceeee--cc------eee
Q 047548           38 VRQGGYGVVYRGKLHEGRVAAVKVLSE----S---MGNGEEFINEVACISGTS--HVNIVTPLGICC--EG------LVY  100 (156)
Q Consensus        38 lg~g~~g~v~~~~~~~~~~~a~k~~~~----~---~~~~~~~~~e~~~l~~l~--~~~i~~l~~~~~--~~------lv~  100 (156)
                      -+.|+-+.|+.-.+.+. .+-+|....    +   ......+.+|...+..+.  ..++++......  .+      +|+
T Consensus        26 ~~rgG~SgV~r~~~~g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT  104 (216)
T PRK09902         26 YRRNGMSGVQCVERNGK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT  104 (216)
T ss_pred             cCCCCcceEEEEEeCCc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence            35578888888765433 566666542    1   112356889999888773  333444331111  11      888


Q ss_pred             ecCCC-CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSN-GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |-+++ -+|.+++....     -..++......+..+++..+.-||+.++.|.|..
T Consensus       105 e~L~g~~~L~~~l~~~~-----~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly  155 (216)
T PRK09902        105 EDMAGFISIADWYAQHA-----VSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCY  155 (216)
T ss_pred             EeCCCCccHHHHHhcCC-----cCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCC
Confidence            86653 48888875432     2235666677889999999999999999999864

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=95.74  E-value=0.1  Score=35.36  Aligned_cols=78  Identities=13%  Similarity=0.100  Sum_probs=53.1

Q ss_pred             HHHHHHHHHcCCC--CCCccccceeeecc--------eeeecCCCC-ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHH
Q 047548           71 EFINEVACISGTS--HVNIVTPLGICCEG--------LVYEFMSNG-SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVAR  139 (156)
Q Consensus        71 ~~~~e~~~l~~l~--~~~i~~l~~~~~~~--------lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~  139 (156)
                      ...+|...+..+.  .-..+....+....        +++|++++. +|.+++....       ..+......++.+++.
T Consensus        57 ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~-------~~~~~~~~~ll~~l~~  129 (206)
T PF06293_consen   57 RAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE-------QLDPSQRRELLRALAR  129 (206)
T ss_pred             HHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc-------ccchhhHHHHHHHHHH
Confidence            4556666555442  22333333333321        889999874 7888887521       1455667888999999


Q ss_pred             HHHHHHhcCCCCcccc
Q 047548          140 GLECLIAVATLGLCIS  155 (156)
Q Consensus       140 gl~yLH~~~~~h~~i~  155 (156)
                      .+.-||..++.|.|.+
T Consensus       130 ~i~~lH~~gi~H~Dl~  145 (206)
T PF06293_consen  130 LIAKLHDAGIYHGDLN  145 (206)
T ss_pred             HHHHHHHCcCCCCCCC
Confidence            9999999999999975

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=95.68  E-value=0.13  Score=34.85  Aligned_cols=97  Identities=19%  Similarity=0.235  Sum_probs=66.2

Q ss_pred             ccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCC--CCccccceeeecc-------eeeecCCCCC
Q 047548           37 KVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSH--VNIVTPLGICCEG-------LVYEFMSNGS  107 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~l~~~~~~~-------lv~e~~~~g~  107 (156)
                      .++.|..+.+|.....+ ..+++|..... .....+..|..++..+..  ..++.++......       ++++++++..
T Consensus         4 ~l~~G~~n~~~~v~~~~-~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~   81 (239)
T PF01636_consen    4 PLSGGFSNRVYRVTTDD-GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRP   81 (239)
T ss_dssp             EEEESSSSEEEEEEETT-SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEE
T ss_pred             cCCCCCeeeEEEEEECC-cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecccc
Confidence            57889999999998876 58888886544 223456677777766532  2344555422221       7889998877


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA  148 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~  148 (156)
                      +..    .         .+......++.+++..+.-||+..
T Consensus        82 ~~~----~---------~~~~~~~~~~~~~~~~l~~lh~~~  109 (239)
T PF01636_consen   82 LDD----E---------LSPEQRPELLRQLGRALAQLHQVP  109 (239)
T ss_dssp             HHH----T---------STHHHHHHHHHHHHHHHHHHHHSH
T ss_pred             ccc----c---------ccccccccccccchhhhhhccccc
Confidence            765    1         456777888899999999999863

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=94.68  E-value=0.83  Score=31.45  Aligned_cols=99  Identities=19%  Similarity=0.252  Sum_probs=62.7

Q ss_pred             hccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCC--CCccccceeeecc----eeeecCCCCC-h
Q 047548           36 DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSH--VNIVTPLGICCEG----LVYEFMSNGS-L  108 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~l~~~~~~~----lv~e~~~~g~-L  108 (156)
                      +.+++|..+.||+..   +..+++|...... ......+|..++..+..  ..+++.+......    ++|++++|.+ +
T Consensus         7 ~~i~~G~t~~~y~~~---~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~   82 (226)
T TIGR02172         7 TQTGEGGNGESYTHK---TGKWMLKLYNPGF-DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF   82 (226)
T ss_pred             eeecCCCCcceeEec---CCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence            467999999999742   3456677766432 33456788888877643  2344555554432    8899998863 3


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVAT  149 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~  149 (156)
                      ...+.           .+......++.+++..+.-+|+...
T Consensus        83 ~~~~~-----------~~~~~~~~l~~~la~~l~~lH~~~~  112 (226)
T TIGR02172        83 SRIIS-----------DNPSRLEEIAKIFAEMAKKLHSTKC  112 (226)
T ss_pred             hhhhc-----------CCHHHHHHHHHHHHHHHHHHhCCCC
Confidence            22221           2334555678888888888997543

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=94.43  E-value=0.45  Score=36.97  Aligned_cols=29  Identities=28%  Similarity=0.306  Sum_probs=26.4

Q ss_pred             ccccccCceEEEEEeCCCcEEEEEecccC
Q 047548           37 KVRQGGYGVVYRGKLHEGRVAAVKVLSES   65 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~~~~~a~k~~~~~   65 (156)
                      -++.++.|+|+++.+++|+.||||+.++.
T Consensus       132 PiAsASIaQVH~A~L~sG~~VAVKVqrPg  160 (517)
T COG0661         132 PIASASIAQVHRAVLKSGEEVAVKVQRPG  160 (517)
T ss_pred             chhhhhHhhheeEEecCCCEEEEEecCCC
Confidence            47899999999999999999999999863

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=94.36  E-value=0.51  Score=32.33  Aligned_cols=98  Identities=18%  Similarity=0.105  Sum_probs=57.3

Q ss_pred             ccccccCceEEEEEeCC--CcEEEEEecccCCCChHHHHHHHHHHcCCCCC-CccccceeeecceeeecCCCCChHHHhh
Q 047548           37 KVRQGGYGVVYRGKLHE--GRVAAVKVLSESMGNGEEFINEVACISGTSHV-NIVTPLGICCEGLVYEFMSNGSLHKFIY  113 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~--~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~l~~~~~~~lv~e~~~~g~L~~~l~  113 (156)
                      .+..|-...+|+....+  +..+.+|.........-...+|..++..+... -.++++......+++||+++.++.... 
T Consensus         5 ~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~~~~l~e~i~G~~l~~~~-   83 (235)
T cd05157           5 RFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQNGLIYEFIPGRTLEPED-   83 (235)
T ss_pred             EcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeCCcEEEEeeCCCcCCHHH-
Confidence            45677778899887653  56788887654321112234667667666322 233444333223999999886553211 


Q ss_pred             hcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 047548          114 DKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVAT  149 (156)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~  149 (156)
                                 +.   ...++.++++.|+-+|+...
T Consensus        84 -----------~~---~~~~~~~la~~l~~lH~~~~  105 (235)
T cd05157          84 -----------LR---NPKIYRLIARELAKLHSIKP  105 (235)
T ss_pred             -----------cc---ChHHHHHHHHHHHHHhcccc
Confidence                       11   12356678888888887654

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=94.33  E-value=1  Score=30.43  Aligned_cols=106  Identities=16%  Similarity=0.166  Sum_probs=65.3

Q ss_pred             hccccccCceEEEEEeCCCcEEEEEecccCC-----------------CChHHHHHHHHHHcCC------CCCCccccce
Q 047548           36 DKVRQGGYGVVYRGKLHEGRVAAVKVLSESM-----------------GNGEEFINEVACISGT------SHVNIVTPLG   92 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~-----------------~~~~~~~~e~~~l~~l------~~~~i~~l~~   92 (156)
                      ..+|+|+.-.||.  ++.....++|+.....                 .......+|+.....+      .+.++.+++|
T Consensus         7 ~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G   84 (199)
T PF10707_consen    7 DLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYG   84 (199)
T ss_pred             cccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeE
Confidence            4689999988886  3345566788877644                 1123455566554444      3778999999


Q ss_pred             eeecc----eeeecCC------CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           93 ICCEG----LVYEFMS------NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        93 ~~~~~----lv~e~~~------~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ...+.    +++|.+.      ..+|.++++..        .++. .....   +-+=..||-+++++..|+.
T Consensus        85 ~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~--------~~~~-~~~~~---L~~f~~~l~~~~Iv~~dl~  145 (199)
T PF10707_consen   85 FVETNLGLGLVVELIRDADGNISPTLEDYLKEG--------GLTE-ELRQA---LDEFKRYLLDHHIVIRDLN  145 (199)
T ss_pred             EEecCCceEEEEEEEECCCCCcCccHHHHHHcC--------CccH-HHHHH---HHHHHHHHHHcCCeecCCC
Confidence            99887    7777653      34777777542        2443 32333   3333446666677766653

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=94.26  E-value=0.013  Score=36.17  Aligned_cols=29  Identities=28%  Similarity=0.370  Sum_probs=26.5

Q ss_pred             ccccccCceEEEEEeCCCcEEEEEecccC
Q 047548           37 KVRQGGYGVVYRGKLHEGRVAAVKVLSES   65 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~~~~~a~k~~~~~   65 (156)
                      -+++++.|+|++|.+++|+.|++|+.++.
T Consensus        18 PlasASiaQVh~a~l~~g~~VaVKV~rP~   46 (119)
T PF03109_consen   18 PLASASIAQVHRARLKDGEEVAVKVQRPG   46 (119)
T ss_pred             hhhheehhhheeeeecccchhhhhhcchH
Confidence            58999999999999988999999998764

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=93.95  E-value=0.77  Score=32.33  Aligned_cols=112  Identities=19%  Similarity=0.173  Sum_probs=63.6

Q ss_pred             ccccccCceEEEEEeCCCcEEEEEecccCCCChH-------------------------HHHHHHHHHcCCC--CCCccc
Q 047548           37 KVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGE-------------------------EFINEVACISGTS--HVNIVT   89 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~-------------------------~~~~e~~~l~~l~--~~~i~~   89 (156)
                      .+++|.-+.||.+...++..+|+|+......+.+                         ....|..-|.++.  +-.+++
T Consensus        55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~  134 (268)
T COG1718          55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE  134 (268)
T ss_pred             eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence            4666777779998877788999999875321111                         1223444454442  223333


Q ss_pred             cceeeecceeeecCCCCC-hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCccccC
Q 047548           90 PLGICCEGLVYEFMSNGS-LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA-VATLGLCIST  156 (156)
Q Consensus        90 l~~~~~~~lv~e~~~~g~-L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~-~~~~h~~i~~  156 (156)
                      -+.....-++|||+.... -.-.|+        ...........+..+++++|.-|=. -+.+|.|.|.
T Consensus       135 Pi~~~~nVLvMEfIg~~g~pAP~Lk--------Dv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSE  195 (268)
T COG1718         135 PIAFRNNVLVMEFIGDDGLPAPRLK--------DVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSE  195 (268)
T ss_pred             ceeecCCeEEEEeccCCCCCCCCcc--------cCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchh
Confidence            333222229999985431 111111        1222233456667778888886655 7899999863

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=93.34  E-value=0.58  Score=32.29  Aligned_cols=94  Identities=14%  Similarity=0.081  Sum_probs=57.6

Q ss_pred             ccccC-ceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCC-CCCccccceeeec---c-eeeecCCCCChHHHh
Q 047548           39 RQGGY-GVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTS-HVNIVTPLGICCE---G-LVYEFMSNGSLHKFI  112 (156)
Q Consensus        39 g~g~~-g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~l~~~~~~---~-lv~e~~~~g~L~~~l  112 (156)
                      ..|.. +.||+.... +..+.+|......  ...+.+|+.++..+. +..+++++.....   . +++++++|.++....
T Consensus         7 ~~g~~~~~v~~~~~~-~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~   83 (244)
T cd05150           7 TEGQSGATVYRLDGK-NPGLYLKIAPSGP--TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAALW   83 (244)
T ss_pred             CCCCCcCeEEEEcCC-CCcEEEEecCCCc--ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHhh
Confidence            33443 678888654 4567778765432  234566777777662 3445555555443   2 999999987765322


Q ss_pred             hhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 047548          113 YDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA  148 (156)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~  148 (156)
                      .             ......++.++++.+.-||+..
T Consensus        84 ~-------------~~~~~~~~~~l~~~l~~lH~i~  106 (244)
T cd05150          84 E-------------ELEPERLVDALAEALRRLHALP  106 (244)
T ss_pred             c-------------ccCHHHHHHHHHHHHHHHhcCC
Confidence            1             1122356788888899999854

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=93.02  E-value=0.34  Score=32.38  Aligned_cols=70  Identities=23%  Similarity=0.197  Sum_probs=49.2

Q ss_pred             HHHHHHcCCCC-CCccccceeeecceeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 047548           74 NEVACISGTSH-VNIVTPLGICCEGLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV  147 (156)
Q Consensus        74 ~e~~~l~~l~~-~~i~~l~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~  147 (156)
                      .|.-++..+++ ++++++.|.|..-++.|+...+++...-..   ... ....+|..+.+++.++++.+.++++.
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~CG~~~v~E~~~~~~~~~~~~~---l~~-~~~~~w~~R~~iA~~lL~~l~~l~~~   78 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSCGRFYVVEYVGAGSLYGIYRP---LSQ-FLQSPWEQRAKIALQLLELLEELDHG   78 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeECCCEEEEEeecCccccccccc---ccc-ccccCHHHHHHHHHHHHHHHHHHhcC
Confidence            35556666654 589999999976689999987655421000   000 22367999999999999999999873

Proteins in this uncharacterised family are described as transmembrane proteins.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=92.48  E-value=1.8  Score=32.64  Aligned_cols=77  Identities=18%  Similarity=0.062  Sum_probs=50.5

Q ss_pred             hccccccCceEEEEEeCCC-cEEEEEecccC--------CCChHHHHHHHHHHcCCC---CCCccccceeeecc--eeee
Q 047548           36 DKVRQGGYGVVYRGKLHEG-RVAAVKVLSES--------MGNGEEFINEVACISGTS---HVNIVTPLGICCEG--LVYE  101 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~~-~~~a~k~~~~~--------~~~~~~~~~e~~~l~~l~---~~~i~~l~~~~~~~--lv~e  101 (156)
                      +.+|.|.+..||+....++ ..+.+|.-.+.        .........|...|..+.   ...+++++......  ++||
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~~~~~lVME  111 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDEELAVTVME  111 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECCCCCEEEEe
Confidence            3689999999999988765 47888875421        112245666777777652   23566666655443  9999


Q ss_pred             cCCCCC-hHHHh
Q 047548          102 FMSNGS-LHKFI  112 (156)
Q Consensus       102 ~~~~g~-L~~~l  112 (156)
                      ++++.. +.+.+
T Consensus       112 ~L~~~~~lr~~L  123 (401)
T PRK09550        112 DLSDHKILRKGL  123 (401)
T ss_pred             cCCCccHHHHHH
Confidence            998754 33443

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=92.40  E-value=0.9  Score=32.49  Aligned_cols=98  Identities=22%  Similarity=0.237  Sum_probs=57.2

Q ss_pred             ccccccCceEEEEEeCC-------CcEEEEEecccCCCChHHHHHHHHHHcCCCCCC-ccccceeeecceeeecCCCCCh
Q 047548           37 KVRQGGYGVVYRGKLHE-------GRVAAVKVLSESMGNGEEFINEVACISGTSHVN-IVTPLGICCEGLVYEFMSNGSL  108 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-------~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~l~~~~~~~lv~e~~~~g~L  108 (156)
                      .+..|-...+|+.....       +..+++|.............+|..++..+.... .+++++.+....+++|++|..+
T Consensus         5 ~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~~~v~e~i~G~~l   84 (302)
T cd05156           5 KISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPNGRIEEFIPSRTL   84 (302)
T ss_pred             EecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCCCchhheeCCCcC
Confidence            34556666788877543       467888886554322234566766666663322 2344444433377788877554


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVAT  149 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~  149 (156)
                      ....            +.   ....+.++++.|+-||+...
T Consensus        85 ~~~~------------~~---~~~~~~~ia~~L~~lH~~~~  110 (302)
T cd05156          85 TTEE------------LR---DPDISAEIARRMAKLHSIVV  110 (302)
T ss_pred             CHhH------------cC---CcHHHHHHHHHHHHhhCCCC
Confidence            3211            11   12356788999999998754

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=90.07  E-value=3.6  Score=31.12  Aligned_cols=114  Identities=18%  Similarity=0.188  Sum_probs=63.4

Q ss_pred             hhhccccccCceEEEEEeCCCcEEEEEecccCC-----------------------CChH----HHHHHHHHHcCCCCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESM-----------------------GNGE----EFINEVACISGTSHVN   86 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~-----------------------~~~~----~~~~e~~~l~~l~~~~   86 (156)
                      +.-.|..|.-+.||.+...+|..+|+|+.+.+-                       +.++    ....|++-|.++....
T Consensus       148 inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aG  227 (520)
T KOG2270|consen  148 INGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAG  227 (520)
T ss_pred             cccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence            344677777888999987778889999987521                       0111    1235666677665444


Q ss_pred             ccccceeeecc--eeeecCCCCCh-HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcccc
Q 047548           87 IVTPLGICCEG--LVYEFMSNGSL-HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV-ATLGLCIS  155 (156)
Q Consensus        87 i~~l~~~~~~~--lv~e~~~~g~L-~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~-~~~h~~i~  155 (156)
                      |+..--+....  |||+|+-.... .-.|+        +..++...+..+-.+++..|--|-.. ..+|-|++
T Consensus       228 IP~PePIlLk~hVLVM~FlGrdgw~aPkLK--------d~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLS  292 (520)
T KOG2270|consen  228 IPCPEPILLKNHVLVMEFLGRDGWAAPKLK--------DASLSTSKARELYQQCVRIMRRLYQKCRLVHADLS  292 (520)
T ss_pred             CCCCCceeeecceEeeeeccCCCCcCcccc--------cccCChHHHHHHHHHHHHHHHHHHHHhceeccchh
Confidence            33322222222  99999843211 11111        23355445555556666666655433 45666553

>TIGR02721 ycfN_thiK thiamine kinase

Probab=89.26  E-value=2.6  Score=29.36  Aligned_cols=96  Identities=13%  Similarity=0.056  Sum_probs=54.9

Q ss_pred             cccccCceEEEEEeCCCcEEEEEecccCCCCh-HHHHHHHHHHcCCCCCCc-cccceeeecceeeecCCCCChHHHhhhc
Q 047548           38 VRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG-EEFINEVACISGTSHVNI-VTPLGICCEGLVYEFMSNGSLHKFIYDK  115 (156)
Q Consensus        38 lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~-~~~~~e~~~l~~l~~~~i-~~l~~~~~~~lv~e~~~~g~L~~~l~~~  115 (156)
                      +..|-.+.+|+... ++..+++|......... -...+|..++..+....+ ++++......++++|++|..+...    
T Consensus         4 ~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~~~~v~e~i~G~~~~~~----   78 (256)
T TIGR02721         4 LSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNEHWLLVEWLEGEVITLD----   78 (256)
T ss_pred             CCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeCCEEEEEeccCcccccc----
Confidence            45577778888763 35567778754432111 134667777777643222 333433322299999988654321    


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 047548          116 GSMSTKNNRLEWTTLSEIVVGVARGLECLIAVAT  149 (156)
Q Consensus       116 ~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~  149 (156)
                             ....    ...+.++++.|.-||+...
T Consensus        79 -------~~~~----~~~~~~la~~l~~lH~~~~  101 (256)
T TIGR02721        79 -------QFVA----LDLLLELAALLHQLHSQPR  101 (256)
T ss_pred             -------cccC----chhHHHHHHHHHHHhCCCC
Confidence                   0011    1245778888888898654

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []

Probab=82.65  E-value=14  Score=26.08  Aligned_cols=75  Identities=19%  Similarity=0.112  Sum_probs=48.0

Q ss_pred             ccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc--eeeecC-CCCChHHHh
Q 047548           37 KVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG--LVYEFM-SNGSLHKFI  112 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~--lv~e~~-~~g~L~~~l  112 (156)
                      .+..|..+.|+.+...+|..+++|+..+........ .....|..-.....++++..-...  +++|.+ ++.+|.+..
T Consensus         9 ~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~~~~E~-~g~~~L~~w~G~GaVrll~~d~~~~AlLLErl~~g~~L~~~~   86 (253)
T PF04655_consen    9 PPAHGSSSLVVPVRRADGTPAVLKLAPPHAEAEHEA-RGEAALRWWNGRGAVRLLAADPERGALLLERLDPGRSLASLP   86 (253)
T ss_pred             CCCCCcceEEEEEEcCCCCeEEEEecCCcccchhhh-hHHhHhheeCCCCceeeeccccccchhhhhhccCCCchhhcc
Confidence            345678888999988889999999987543221111 111346655666677887766444  888988 444665443

Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=81.94  E-value=15  Score=25.60  Aligned_cols=42  Identities=10%  Similarity=0.090  Sum_probs=31.0

Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +++||++|-.|.+...           .+.    .+...+.+++.-+|..+..|.|.
T Consensus       120 ll~EYIeG~~l~d~~~-----------i~e----~~~~ki~~~ikqlH~~G~~HGD~  161 (229)
T PF06176_consen  120 LLMEYIEGVELNDIED-----------IDE----DLAEKIVEAIKQLHKHGFYHGDP  161 (229)
T ss_pred             EEEEEecCeecccchh-----------cCH----HHHHHHHHHHHHHHHcCCccCCC
Confidence            8999999987755431           222    24455777899999999999986

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=80.02  E-value=0.77  Score=36.73  Aligned_cols=107  Identities=12%  Similarity=-0.002  Sum_probs=61.6

Q ss_pred             ccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCC-ccccceeeecc----eeeecCCCC-ChHH
Q 047548           37 KVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVN-IVTPLGICCEG----LVYEFMSNG-SLHK  110 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~l~~~~~~~----lv~e~~~~g-~L~~  110 (156)
                      ..++++++++++.+....+....+.+...    ....-++++|..++||| .+...+.+...    +.++++..+ +...
T Consensus       249 ~fvK~altknpKkRptaeklL~h~fvs~~----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~  324 (829)
T KOG0576|consen  249 NFVKGALTKNPKKRPTAEKLLQHPFVSQT----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSAL  324 (829)
T ss_pred             HHHHHHhcCCCccCCChhhheeceeeccc----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccccc
Confidence            45788888888876443222223333221    33455677899999999 55555544443    666666554 1111


Q ss_pred             HhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcc
Q 047548          111 FIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLC  153 (156)
Q Consensus       111 ~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~  153 (156)
                      .....      .-.+.......+++.-.++++|+|+...+|+|
T Consensus       325 ~~~~s------e~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d  361 (829)
T KOG0576|consen  325 EMTVS------EIALEQYQFAYPLRKETRPLAELHSSYKVHRD  361 (829)
T ss_pred             cCChh------hHhhhhhhhhhhhhhhcccccccccccccCcc
Confidence            11000      11122334555666778899999998888876

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	156
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		1e-06
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		1e-06
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		1e-06
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		8e-05
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		8e-05
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		2e-04
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		2e-04
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		2e-04
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		5e-04
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		5e-04
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		6e-04
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		6e-04
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		6e-04
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		6e-04
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		6e-04
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		6e-04
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		6e-04
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		6e-04
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		6e-04
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		6e-04
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		6e-04
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		6e-04
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		6e-04
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		6e-04
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		6e-04
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		6e-04
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		6e-04
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		6e-04
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		6e-04
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		9e-04
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		9e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 50  KLHEGRVAAVKVLSESMGNGEE--FINEVACISGTSHVNIVTPLGICCEG----LVYEFM 103
           +L +G + AVK L E    G E  F  EV  IS   H N++   G C       LVY +M
Sbjct: 58  RLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYM 117
Query: 104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           +NGS+   + ++         L+W     I +G ARGL  L
Sbjct: 118 ANGSVASCLRERPESQPP---LDWPKRQRIALGSARGLAYL 155

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 50  KLHEGRVAAVKVLSESMGNGEE--FINEVACISGTSHVNIVTPLGICCEG----LVYEFM 103
           +L +G + AVK L E    G E  F  EV  IS   H N++   G C       LVY +M
Sbjct: 50  RLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYM 109
Query: 104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           +NGS+   + ++         L+W     I +G ARGL  L
Sbjct: 110 ANGSVASCLRERPESQPP---LDWPKRQRIALGSARGLAYL 147

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 56  VAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCE---------GLVYEFMSNG 106
           V  +K+ + S    EEF++E AC+   SH N++  LG+C E          ++  FM  G
Sbjct: 67  VKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYG 126
Query: 107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
            LH ++     + T    +   TL + +V +A G+E L
Sbjct: 127 DLHTYLL-YSRLETGPKHIPLQTLLKFMVDIALGMEYL 163

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 14/128 (10%)
Query: 26  DVKKMTNSFSDKXXXXXXXXXXXXK--LHEG-RVAAVKVLSESMGNGEEFINEVACISGT 82
           D+++ TN+F  K            K  L +G +VA  +   ES    EEF  E+  +S  
Sbjct: 33  DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 83  SHVNIVTPLGICCEG----LVYEFMSNGSLHKFIY--DKGSMSTKNNRLEWTTLSEIVVG 136
            H ++V+ +G C E     L+Y++M NG+L + +Y  D  +MS     + W    EI +G
Sbjct: 93  RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-----MSWEQRLEICIG 147
Query: 137 VARGLECL 144
            ARGL  L
Sbjct: 148 AARGLHYL 155

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 14/128 (10%)
Query: 26  DVKKMTNSFSDKXXXXXXXXXXXXK--LHEG-RVAAVKVLSESMGNGEEFINEVACISGT 82
           D+++ TN+F  K            K  L +G +VA  +   ES    EEF  E+  +S  
Sbjct: 33  DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 83  SHVNIVTPLGICCEG----LVYEFMSNGSLHKFIY--DKGSMSTKNNRLEWTTLSEIVVG 136
            H ++V+ +G C E     L+Y++M NG+L + +Y  D  +MS     + W    EI +G
Sbjct: 93  RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-----MSWEQRLEICIG 147
Query: 137 VARGLECL 144
            ARGL  L
Sbjct: 148 AARGLHYL 155

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 54  GRVAAVKVLSESMGNGE---EFINEVACISGTSHVNIVTPLGICCE----GLVYEFMSNG 106
           G   AVK+L E   + E   EF+ EVA +    H NIV  +G   +     +V E++S G
Sbjct: 60  GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119
Query: 107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           SL++ ++  G+    + R     LS +   VA+G+  L
Sbjct: 120 SLYRLLHKSGAREQLDER---RRLS-MAYDVAKGMNYL 153

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 54  GRVAAVKVLSESMGNGE---EFINEVACISGTSHVNIVTPLGICCE----GLVYEFMSNG 106
           G   AVK+L E   + E   EF+ EVA +    H NIV  +G   +     +V E++S G
Sbjct: 60  GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119
Query: 107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           SL++ ++  G+    + R     LS +   VA+G+  L
Sbjct: 120 SLYRLLHKSGAREQLDER---RRLS-MAYDVAKGMNYL 153

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 56  VAAVKVLSESMGNG-EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHK 110
           + AVK L ++  N  ++F  E   ++   H +IV   G+C EG    +V+E+M +G L+K
Sbjct: 45  LVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNK 104
Query: 111 FIYDKGS 117
           F+   G 
Sbjct: 105 FLRAHGP 111

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 47  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 105

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 43  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 101

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 42  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 100

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 43  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 101

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 44  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 102

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 42  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 100

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 47  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 47  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 40  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 98

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 42  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 46  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 104

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 42  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 44  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 102

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 42  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 55  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 113

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 47  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 42  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 40  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 98

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 40  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 98

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 47  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 44  AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 102

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 58  AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFI 112
           AVK L E     EEF+ E A +    H N+V  LG+C       ++ EFM+ G+L  ++
Sbjct: 249 AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 307

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	156
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-36
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-35
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-33
3soc_A	322	Activin receptor type-2A; structural genomics cons	8e-25
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	4e-22
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	9e-22
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	4e-21
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	5e-21
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-20
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-20
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	8e-20
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-19
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	5e-19
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	5e-18
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	6e-18
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-17
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	4e-17
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	6e-17
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	5e-16
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	9e-16
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	8e-15
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-14
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-14
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-14
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-14
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-14
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	3e-14
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-14
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	4e-14
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-14
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	4e-14
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	6e-14
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	6e-14
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	6e-14
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	8e-14
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	8e-14
4aoj_A	329	High affinity nerve growth factor receptor; transf	9e-14
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	9e-14
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-13
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-13
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-13
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-13
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-13
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-13
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-13
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-13
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-13
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	4e-13
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	4e-13
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	5e-13
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	5e-13
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	8e-13
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-12
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-12
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	3e-12
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-12
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	5e-12
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	5e-12
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	9e-12
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-11
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-11
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-11
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-11
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	4e-11
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	7e-11
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-10
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	5e-10
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	7e-10
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-09
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	6e-09
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	9e-09
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-07
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-07
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-07
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	4e-07
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-07
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	5e-07
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	5e-07
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	5e-07
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	7e-07
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	8e-07
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-06
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-06
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-06
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-06
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-06
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-06
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	4e-06
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	6e-06
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	6e-06
3niz_A	311	Rhodanese family protein; structural genomics, str	9e-06
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-05
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-05
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-05
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-05
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-05
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-05
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-05
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-05
3ork_A	311	Serine/threonine protein kinase; structural genomi	3e-05
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	4e-05
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	5e-05
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	6e-05
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	8e-05
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	9e-05
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-04
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-04
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-04
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-04
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-04
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-04
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-04
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-04
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	3e-04
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-04
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-04
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	4e-04
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	4e-04
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-04
3bhy_A	283	Death-associated protein kinase 3; death associate	5e-04
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	5e-04
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	5e-04
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-04
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	5e-04
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	7e-04
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	7e-04
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	7e-04
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	8e-04
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	8e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  126 bits (320), Expect = 2e-36
 Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 11/134 (8%)

Query: 19  PKGYNYSDVKKMTNSFSD--KVRQGGYGVVYRGKLHEGRVAAVKVLSE--SMGNGEEFIN 74
            K ++  +++  +++FS+   + +GG+G VY+G+L +G + AVK L E  + G   +F  
Sbjct: 17  LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQT 76

Query: 75  EVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTL 130
           EV  IS   H N++   G C       LVY +M+NGS+   + ++         L+W   
Sbjct: 77  EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPE---SQPPLDWPKR 133

Query: 131 SEIVVGVARGLECL 144
             I +G ARGL  L
Sbjct: 134 QRIALGSARGLAYL 147

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  124 bits (314), Expect = 1e-35
 Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 10/128 (7%)

Query: 24  YSDVKKMTNSFSDKVR--QGGYGVVYRGKLHEGRVAAVKVLSESMGNGE-EFINEVACIS 80
             D+++ TN+F  K     G +G VY+G L +G   A+K  +     G  EF  E+  +S
Sbjct: 31  LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90

Query: 81  GTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVG 136
              H ++V+ +G C E     L+Y++M NG+L + +Y           + W    EI +G
Sbjct: 91  FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDL---PTMSMSWEQRLEICIG 147

Query: 137 VARGLECL 144
            ARGL  L
Sbjct: 148 AARGLHYL 155

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  118 bits (298), Expect = 2e-33
 Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 22/151 (14%)

Query: 11  IRKYGSLAPKGYNYSDVKKMTNSFSDKVR--------QGGYGVVYRGKLHEGRVAAVKVL 62
             +        +++ ++K +TN+F ++          +GG+GVVY+G +      AVK L
Sbjct: 4   SLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKL 62

Query: 63  SESMGNG-----EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIY 113
           +  +        ++F  E+  ++   H N+V  LG   +G    LVY +M NGSL   + 
Sbjct: 63  AAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 122

Query: 114 DKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
                      L W    +I  G A G+  L
Sbjct: 123 CLDGTPP----LSWHMRCKIAQGAANGINFL 149

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 95.9 bits (239), Expect = 8e-25
 Identities = 32/134 (23%), Positives = 50/134 (37%), Gaps = 19/134 (14%)

Query: 21  GYNYSDVKKMTNSFS--DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVAC 78
                ++   +      +   +G +G V++ +L    VA VK+         +   EV  
Sbjct: 13  DLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVA-VKIFPIQDKQSWQNEYEVYS 71

Query: 79  ISGTSHVNIVTPLGICCEG--------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTL 130
           + G  H NI+  +G    G        L+  F   GSL  F+        K N + W  L
Sbjct: 72  LPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL--------KANVVSWNEL 123

Query: 131 SEIVVGVARGLECL 144
             I   +ARGL  L
Sbjct: 124 CHIAETMARGLAYL 137

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 89.1 bits (221), Expect = 4e-22
 Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 22/123 (17%)

Query: 33  SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINE--VACISGTSHVNIVTP 90
              + + +G YG VY+G L   R  AVKV   S  N + FINE  +  +    H NI   
Sbjct: 16  KLLELIGRGRYGAVYKGSLD-ERPVAVKVF--SFANRQNFINEKNIYRVPLMEHDNIARF 72

Query: 91  LGICCEG---------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGL 141
           +               LV E+  NGSL K++          +  +W +   +   V RGL
Sbjct: 73  IVGDERVTADGRMEYLLVMEYYPNGSLXKYL--------SLHTSDWVSSCRLAHSVTRGL 124

Query: 142 ECL 144
             L
Sbjct: 125 AYL 127

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 87.7 bits (218), Expect = 9e-22
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 17/129 (13%)

Query: 23  NYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG---EEFINEVACI 79
            + D+        +K+  G +G V+R + H G   AVK+L E   +     EF+ EVA +
Sbjct: 35  PWCDLN-----IKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIM 88

Query: 80  SGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVV 135
               H NIV  +G   +     +V E++S GSL++ ++  G+      +L+      +  
Sbjct: 89  KRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA----REQLDERRRLSMAY 144

Query: 136 GVARGLECL 144
            VA+G+  L
Sbjct: 145 DVAKGMNYL 153

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 86.2 bits (214), Expect = 4e-21
 Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 13/124 (10%)

Query: 23  NYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGT 82
           +Y +++       + V +G +GVV + K    +  A+K + ES    + FI E+  +S  
Sbjct: 6   DYKEIE-----VEEVVGRGAFGVVCKAKWR-AKDVAIKQI-ESESERKAFIVELRQLSRV 58

Query: 83  SHVNIVTPLGICCEGL--VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARG 140
           +H NIV   G C   +  V E+   GSL+  ++                     +  ++G
Sbjct: 59  NHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAE----PLPYYTAAHAMSWCLQCSQG 114

Query: 141 LECL 144
           +  L
Sbjct: 115 VAYL 118

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 85.4 bits (212), Expect = 5e-21
 Identities = 31/133 (23%), Positives = 65/133 (48%), Gaps = 22/133 (16%)

Query: 23  NYSDVKKMTNSFSDKVRQGGYGVVYRGK-LHEGRVAAVKVLSESMGNG--------EEFI 73
             ++++     +  ++ +GG+G+V++G+ + +  V A+K L      G        +EF 
Sbjct: 17  ADNEIE-----YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQ 71

Query: 74  NEVACISGTSHVNIVTPLGICCEG--LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLS 131
            EV  +S  +H NIV   G+      +V EF+  G L+  + D      K + ++W+   
Sbjct: 72  REVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLD------KAHPIKWSVKL 125

Query: 132 EIVVGVARGLECL 144
            +++ +A G+E +
Sbjct: 126 RLMLDIALGIEYM 138

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 83.9 bits (208), Expect = 3e-20
 Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 15/118 (12%)

Query: 34  FSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTP 90
             + + +G +G VY G+ H G VA ++++     N    + F  EV     T H N+V  
Sbjct: 37  IGELIGKGRFGQVYHGRWH-GEVA-IRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLF 94

Query: 91  LGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           +G C       ++       +L+  + D          L+     +I   + +G+  L
Sbjct: 95  MGACMSPPHLAIITSLCKGRTLYSVVRD------AKIVLDVNKTRQIAQEIVKGMGYL 146

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 83.0 bits (206), Expect = 3e-20
 Identities = 27/131 (20%), Positives = 54/131 (41%), Gaps = 20/131 (15%)

Query: 23  NYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG---EEFINEVACI 79
           ++  +      F  K+ +   G +++G+   G    VKVL     +     +F  E   +
Sbjct: 8   DFKQLN-----FLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRL 61

Query: 80  SGTSHVNIVTPLGICCEG------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEI 133
              SH N++  LG C         L+  +M  GSL+  +++       N  ++ +   + 
Sbjct: 62  RIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEG-----TNFVVDQSQAVKF 116

Query: 134 VVGVARGLECL 144
            + +ARG+  L
Sbjct: 117 ALDMARGMAFL 127

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 82.3 bits (204), Expect = 8e-20
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 14/117 (11%)

Query: 34  FSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGE---EFINEVACISGTSHVNIVTP 90
              ++  G +G VY+GK H G VA VK+L+ +    +    F NEV  +  T HVNI+  
Sbjct: 28  VGQRIGSGSFGTVYKGKWH-GDVA-VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85

Query: 91  LGICCEGLVY---EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           +G      +    ++    SL+  ++          + E   L +I    ARG++ L
Sbjct: 86  MGYSTAPQLAIVTQWCEGSSLYHHLHASE------TKFEMKKLIDIARQTARGMDYL 136

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 79.6 bits (197), Expect = 5e-19
 Identities = 30/120 (25%), Positives = 44/120 (36%), Gaps = 18/120 (15%)

Query: 34  FSDKVRQGGYGVVYRGKLHEGRVAAVKVL-----SESMGNGEEFINEVACISGTSHVNIV 88
             + +  GG+G VYR       V AVK        +     E    E    +   H NI+
Sbjct: 11  LEEIIGIGGFGKVYRAFWIGDEV-AVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69

Query: 89  TPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
              G+C +     LV EF   G L++ +           R+    L    V +ARG+  L
Sbjct: 70  ALRGVCLKEPNLCLVMEFARGGPLNRVL--------SGKRIPPDILVNWAVQIARGMNYL 121

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 77.8 bits (192), Expect = 5e-18
 Identities = 23/128 (17%), Positives = 47/128 (36%), Gaps = 17/128 (13%)

Query: 23  NYSDVKKMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSE-SMGNGEEFINEVACIS 80
             SD+        + + +G +G   +    E G V  +K L          F+ EV  + 
Sbjct: 8   RPSDLI-----HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMR 62

Query: 81  GTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVG 136
              H N++  +G+  +      + E++  G+L   I         +++  W+        
Sbjct: 63  CLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS------MDSQYPWSQRVSFAKD 116

Query: 137 VARGLECL 144
           +A G+  L
Sbjct: 117 IASGMAYL 124

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 77.9 bits (192), Expect = 6e-18
 Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 21/121 (17%)

Query: 34  FSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINE--VACISGTSHVNIVTPL 91
              ++ +G YG V+ GK    +V AVKV   +      +  E  +       H NI+  +
Sbjct: 41  MVKQIGKGRYGEVWMGKWRGEKV-AVKVFFTT--EEASWFRETEIYQTVLMRHENILGFI 97

Query: 92  GICCEG--------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLEC 143
               +G        L+ ++  NGSL+ ++        K+  L+  ++ ++      GL  
Sbjct: 98  AADIKGTGSWTQLYLITDYHENGSLYDYL--------KSTTLDAKSMLKLAYSSVSGLCH 149

Query: 144 L 144
           L
Sbjct: 150 L 150

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 75.5 bits (186), Expect = 4e-17
 Identities = 27/121 (22%), Positives = 47/121 (38%), Gaps = 21/121 (17%)

Query: 34  FSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINE--VACISGTSHVNIVTPL 91
             + V +G YG V+RG      V AVK+ S    + + +  E  +       H NI+  +
Sbjct: 12  LLECVGKGRYGEVWRGSWQGENV-AVKIFSSR--DEKSWFRETELYNTVMLRHENILGFI 68

Query: 92  GICCEG--------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLEC 143
                         L+  +   GSL+ ++        +   L+  +   IV+ +A GL  
Sbjct: 69  ASDMTSRHSSTQLWLITHYHEMGSLYDYL--------QLTTLDTVSCLRIVLSIASGLAH 120

Query: 144 L 144
           L
Sbjct: 121 L 121

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 75.2 bits (185), Expect = 6e-17
 Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 21/121 (17%)

Query: 34  FSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINE--VACISGTSHVNIVTPL 91
             + + +G +G V+RGK     V AVK+ S        +  E  +       H NI+  +
Sbjct: 46  LQESIGKGRFGEVWRGKWRGEEV-AVKIFSSR--EERSWFREAEIYQTVMLRHENILGFI 102

Query: 92  GICCEG--------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLEC 143
               +         LV ++  +GSL  ++            +    + ++ +  A GL  
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYL--------NRYTVTVEGMIKLALSTASGLAH 154

Query: 144 L 144
           L
Sbjct: 155 L 155

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 72.3 bits (178), Expect = 5e-16
 Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 40  QGGYGVVYRGKLH-------EGRVAAVKVLSE--SMGNGEEFINEVACISGTSHVNIVTP 90
            G +G VY G++          +VA VK L E  S  +  +F+ E   IS  +H NIV  
Sbjct: 40  HGAFGEVYEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 98

Query: 91  LGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           +G+  +     ++ E M+ G L  F+ +     ++ + L    L  +   +A G + L
Sbjct: 99  IGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 72.0 bits (177), Expect = 9e-16
 Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 40  QGGYGVVYRGKLH-------EGRVAAVKVLSE--SMGNGEEFINEVACISGTSHVNIVTP 90
            G +G VY G++          +VA VK L E  S  +  +F+ E   IS  +H NIV  
Sbjct: 81  HGAFGEVYEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 139

Query: 91  LGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           +G+  +     ++ E M+ G L  F+ +     ++ + L    L  +   +A G + L
Sbjct: 140 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 68.9 bits (169), Expect = 8e-15
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 17/121 (14%)

Query: 40  QGGYGVVYRGKLH-------EGRVAAVKVLSE--SMGNGEEFINEVACISGTSHVNIVTP 90
           QG +G+VY G          E RVA +K ++E  SM    EF+NE + +   +  ++V  
Sbjct: 35  QGSFGMVYEGVAKGVVKDEPETRVA-IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 93

Query: 91  LGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIV---VGVARGLEC 143
           LG+  +G    ++ E M+ G L  ++         N  L   +LS+++     +A G+  
Sbjct: 94  LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAY 153

Query: 144 L 144
           L
Sbjct: 154 L 154

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 68.8 bits (169), Expect = 1e-14
 Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 16/115 (13%)

Query: 40  QGGYGVVYRGKLHEGRVA-----AVKVLSE--SMGNGEEFINEVACISGTSHVNIVTPLG 92
            G +G VY+G             A+K L E  S    +E ++E   ++   + ++   LG
Sbjct: 25  SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 84

Query: 93  ICCEG---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           IC      L+ + M  G L  ++ +        + +    L    V +A+G+  L
Sbjct: 85  ICLTSTVQLITQLMPFGCLLDYVREHK------DNIGSQYLLNWCVQIAKGMNYL 133

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 68.4 bits (168), Expect = 1e-14
 Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)

Query: 40  QGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG-- 97
            G +GVV  GK       A+K++ E   + +EFI E   +   SH  +V   G+C +   
Sbjct: 34  TGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP 93

Query: 98  --LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
             ++ E+M+NG L  ++ +         R +   L E+   V   +E L
Sbjct: 94  IFIITEYMANGCLLNYLREMRH------RFQTQQLLEMCKDVCEAMEYL 136

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 68.8 bits (168), Expect = 2e-14
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 8/108 (7%)

Query: 40  QGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEGLV 99
           QG +G V+ G  +     A+K L     + E F+ E   +    H  +V    +  E  +
Sbjct: 277 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 336

Query: 100 Y---EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           Y   E+MS GSL  F+  +         L    L ++   +A G+  +
Sbjct: 337 YIVTEYMSKGSLLDFLKGETG-----KYLRLPQLVDMAAQIASGMAYV 379

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 67.2 bits (165), Expect = 2e-14
 Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 10/109 (9%)

Query: 40  QGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG-- 97
            G +GVV  GK       AVK++ E   + +EF  E   +   SH  +V   G+C +   
Sbjct: 18  SGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYP 77

Query: 98  --LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
             +V E++SNG L  ++   G        LE + L E+   V  G+  L
Sbjct: 78  IYIVTEYISNGCLLNYLRSHGK------GLEPSQLLEMCYDVCEGMAFL 120

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 68.2 bits (167), Expect = 2e-14
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 8/108 (7%)

Query: 40  QGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEGLV 99
           QG +G V+ G  +     A+K L     + E F+ E   +    H  +V    +  E  +
Sbjct: 194 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 253

Query: 100 Y---EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           Y   E+MS GSL  F+  +         L    L ++   +A G+  +
Sbjct: 254 YIVTEYMSKGSLLDFLKGETGKY-----LRLPQLVDMAAQIASGMAYV 296

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 66.9 bits (164), Expect = 3e-14
 Identities = 27/118 (22%), Positives = 45/118 (38%), Gaps = 19/118 (16%)

Query: 40  QGGYGVVYRGKLHEGRVA--------AVKVLSE-SMGNGEEFINEVACISGTSHVNIVTP 90
           QG +  +++G   E             +KVL +      E F    + +S  SH ++V  
Sbjct: 18  QGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLN 77

Query: 91  LGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
            G+C  G    LV EF+  GSL  ++          N +      E+   +A  +  L
Sbjct: 78  YGVCVCGDENILVQEFVKFGSLDTYLKKNK------NCINILWKLEVAKQLAAAMHFL 129

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 66.9 bits (164), Expect = 4e-14
 Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 10/110 (9%)

Query: 40  QGGYGVVYRGKLHEGRVA-AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG- 97
            G YG VY G   +  +  AVK L E     EEF+ E A +    H N+V  LG+C    
Sbjct: 23  GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82

Query: 98  ---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
              ++ EFM+ G+L  ++ +          +    L  +   ++  +E L
Sbjct: 83  PFYIITEFMTYGNLLDYLRECNR-----QEVSAVVLLYMATQISSAMEYL 127

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 66.9 bits (164), Expect = 4e-14
 Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 17/116 (14%)

Query: 40  QGGYGVVYRGKLHEGR----VAAVKVLSE--SMGNGEEFINEVACISGTSHVNIVTPLGI 93
           +G +G VY G L +        AVK L+    +G   +F+ E   +   SH N+++ LGI
Sbjct: 35  RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 94

Query: 94  CCEG-----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           C        +V  +M +G L  FI ++       +      L    + VA+G++ L
Sbjct: 95  CLRSEGSPLVVLPYMKHGDLRNFIRNET------HNPTVKDLIGFGLQVAKGMKYL 144

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 67.3 bits (165), Expect = 4e-14
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 13/112 (11%)

Query: 40  QGGYGVVYRGKLHEGRVA-AVKVLSESMGNGE--EFINEVACISGTSHVNIVTPLGICCE 96
           +G +G V+ G+L       AVK   E++      +F+ E   +   SH NIV  +G+C +
Sbjct: 124 RGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ 183

Query: 97  G----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
                +V E +  G    F+  +G+      RL   TL ++V   A G+E L
Sbjct: 184 KQPIYIVMELVQGGDFLTFLRTEGA------RLRVKTLLQMVGDAAAGMEYL 229

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 66.5 bits (163), Expect = 4e-14
 Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 10/109 (9%)

Query: 40  QGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG-- 97
            G +G+V+ G        A+K + E   + E+FI E   +   SH  +V   G+C E   
Sbjct: 18  SGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP 77

Query: 98  --LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
             LV EFM +G L  ++  +             TL  + + V  G+  L
Sbjct: 78  ICLVTEFMEHGCLSDYLRTQRG------LFAAETLLGMCLDVCEGMAYL 120

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 66.1 bits (162), Expect = 6e-14
 Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 40  QGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG-- 97
           +G +G V  G     +VA VK +       + F+ E + ++   H N+V  LG+  E   
Sbjct: 31  KGEFGDVMLGDYRGNKVA-VKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 88

Query: 98  ---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
              +V E+M+ GSL  ++  +G      + L    L +  + V   +E L
Sbjct: 89  GLYIVTEYMAKGSLVDYLRSRGR-----SVLGGDCLLKFSLDVCEAMEYL 133

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 66.6 bits (163), Expect = 6e-14
 Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 16/115 (13%)

Query: 40  QGGYGVVYRGKLHEGRVA-----AVKVLSE--SMGNGEEFINEVACISGTSHVNIVTPLG 92
            G +G VY+G             A+K L E  S    +E ++E   ++   + ++   LG
Sbjct: 25  SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 84

Query: 93  ICCEG---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           IC      L+ + M  G L  ++ +        + +    L    V +A+G+  L
Sbjct: 85  ICLTSTVQLITQLMPFGCLLDYVREHK------DNIGSQYLLNWCVQIAKGMNYL 133

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 66.7 bits (163), Expect = 6e-14
 Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 23/119 (19%)

Query: 40  QGGYGVVYRGKLHEG-----RVAAVKVLSE--SMGNGEEFINEVACISGTSHVNIVTPLG 92
           +G +G VY G L +        A VK L+    +G   +F+ E   +   SH N+++ LG
Sbjct: 99  RGHFGCVYHGTLLDNDGKKIHCA-VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 157

Query: 93  ICCEG-----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWT--TLSEIVVGVARGLECL 144
           IC        +V  +M +G L  FI        +N     T   L    + VA+G++ L
Sbjct: 158 ICLRSEGSPLVVLPYMKHGDLRNFI--------RNETHNPTVKDLIGFGLQVAKGMKFL 208

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 66.9 bits (163), Expect = 8e-14
 Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 14/113 (12%)

Query: 40  QGGYGVVYRGKLHEGRVA---AVKVLSE--SMGNGEEFINEVACISGTSHVNIVTPLGIC 94
            G +G V +G     +     A+KVL +     + EE + E   +    +  IV  +G+C
Sbjct: 346 CGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC 405

Query: 95  CEG---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
                 LV E    G LHKF+  K         +  + ++E++  V+ G++ L
Sbjct: 406 QAEALMLVMEMAGGGPLHKFLVGKR------EEIPVSNVAELLHQVSMGMKYL 452

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 66.1 bits (162), Expect = 8e-14
 Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 22/126 (17%)

Query: 40  QGGYGVVYRGKLH-------EGRVAAVKVLSE-SMGNGEEFINEVACISGTSHVNIVTPL 91
           +G +G V+  + +       +  VA VK L + ++   ++F  E   ++   H +IV   
Sbjct: 25  EGAFGKVFLAECYNLSPTKDKMLVA-VKALKDPTLAARKDFQREAELLTNLQHEHIVKFY 83

Query: 92  GICCEG----LVYEFMSNGSLHKF---------IYDKGSMSTKNNRLEWTTLSEIVVGVA 138
           G+C +G    +V+E+M +G L+KF         I   G        L  + +  I   +A
Sbjct: 84  GVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIA 143

Query: 139 RGLECL 144
            G+  L
Sbjct: 144 SGMVYL 149

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 66.2 bits (162), Expect = 9e-14
 Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 21/125 (16%)

Query: 40  QGGYGVVYRGKLH-------EGRVAAVKVLSE-SMGNGEEFINEVACISGTSHVNIVTPL 91
           +G +G V+  + H       +  VA VK L E S    ++F  E   ++   H +IV   
Sbjct: 51  EGAFGKVFLAECHNLLPEQDKMLVA-VKALKEASESARQDFQREAELLTMLQHQHIVRFF 109

Query: 92  GICCEG----LVYEFMSNGSLHKF--------IYDKGSMSTKNNRLEWTTLSEIVVGVAR 139
           G+C EG    +V+E+M +G L++F            G        L    L  +   VA 
Sbjct: 110 GVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAA 169

Query: 140 GLECL 144
           G+  L
Sbjct: 170 GMVYL 174

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 65.7 bits (161), Expect = 9e-14
 Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 14/113 (12%)

Query: 40  QGGYGVVYRGKL--HEGRVA-AVKVLSE--SMGNGEEFINEVACISGTSHVNIVTPLGIC 94
            G +G V +G     + ++  A+KVL +     + EE + E   +    +  IV  +G+C
Sbjct: 20  CGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC 79

Query: 95  CEG---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
                 LV E    G LHKF+  K         +  + ++E++  V+ G++ L
Sbjct: 80  QAEALMLVMEMAGGGPLHKFLVGKR------EEIPVSNVAELLHQVSMGMKYL 126

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 66.3 bits (162), Expect = 1e-13
 Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 8/108 (7%)

Query: 40  QGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEGLV 99
            G +G V+    ++    AVK +     + E F+ E   +    H  +V    +  +  +
Sbjct: 198 AGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI 257

Query: 100 Y---EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           Y   EFM+ GSL  F+      S + ++     L +    +A G+  +
Sbjct: 258 YIITEFMAKGSLLDFLK-----SDEGSKQPLPKLIDFSAQIAEGMAFI 300

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 65.8 bits (161), Expect = 1e-13
 Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 17/116 (14%)

Query: 40  QGGYGVVYRGKLHEGRVA----AVKVLSE--SMGNGEEFINEVACISGTSHVNIVTPLGI 93
           +G +GVVY G+  +        A+K LS    M   E F+ E   + G +H N++  +GI
Sbjct: 31  KGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGI 90

Query: 94  CCEG-----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
                    ++  +M +G L +FI                 L    + VARG+E L
Sbjct: 91  MLPPEGLPHVLLPYMCHGDLLQFIRSPQ------RNPTVKDLISFGLQVARGMEYL 140

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 65.8 bits (161), Expect = 1e-13
 Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 12/116 (10%)

Query: 34  FSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGI 93
               + +G +G V  G     +VA VK +       + F+ E + ++   H N+V  LG+
Sbjct: 197 LLQTIGKGEFGDVMLGDYRGNKVA-VKCIKNDATA-QAFLAEASVMTQLRHSNLVQLLGV 254

Query: 94  CCEG-----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
             E      +V E+M+ GSL  ++  +G      + L    L +  + V   +E L
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGR-----SVLGGDCLLKFSLDVCEAMEYL 305

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 65.4 bits (160), Expect = 1e-13
 Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 16/115 (13%)

Query: 40  QGGYGVVYRGKLHEGRVA-----AVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLG 92
            G +G V++G       +      +KV+ +  G  + +   + +  I    H +IV  LG
Sbjct: 23  SGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG 82

Query: 93  ICCEG---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           +C      LV +++  GSL   +            L    L    V +A+G+  L
Sbjct: 83  LCPGSSLQLVTQYLPLGSLLDHVRQHR------GALGPQLLLNWGVQIAKGMYYL 131

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 65.0 bits (159), Expect = 2e-13
 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 16/114 (14%)

Query: 40  QGGYGVVYRGKLHEGRVA---AVKVL---SESMGNGEEFINEVACISGTSHVNIVTPLGI 93
            G +G V +G     +V    AVK+L   +      +E + E   +    +  IV  +GI
Sbjct: 27  SGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI 86

Query: 94  CCEG---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           C      LV E    G L+K++        +N  ++   + E+V  V+ G++ L
Sbjct: 87  CEAESWMLVMEMAELGPLNKYL-------QQNRHVKDKNIIELVHQVSMGMKYL 133

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 65.4 bits (160), Expect = 2e-13
 Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 21/118 (17%)

Query: 40  QGGYGVVYRGKLH-----EGRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLG 92
           +G +G V            G + AVK L    G  +   +  E+  +    H +I+   G
Sbjct: 41  EGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKG 100

Query: 93  ICCEG------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
            C +       LV E++  GSL  ++          + +    L      +  G+  L
Sbjct: 101 CCEDAGAASLQLVMEYVPLGSLRDYL--------PRHSIGLAQLLLFAQQICEGMAYL 150

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 65.6 bits (160), Expect = 2e-13
 Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 10/110 (9%)

Query: 40  QGGYGVVYRGKLHEGRVA-AVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG- 97
            G YG VY G   +  +  AVK L E     EEF+ E A +    H N+V  LG+C    
Sbjct: 230 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 289

Query: 98  ---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
              ++ EFM+ G+L  ++ +          +    L  +   ++  +E L
Sbjct: 290 PFYIITEFMTYGNLLDYLRECN-----RQEVSAVVLLYMATQISSAMEYL 334

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 64.9 bits (159), Expect = 2e-13
 Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 8/108 (7%)

Query: 40  QGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEGLV 99
            G +G V+ G  +     AVK L +   + + F+ E   +    H  +V    +  +  +
Sbjct: 23  AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI 82

Query: 100 Y---EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           Y   E+M NGSL  F+      +    +L    L ++   +A G+  +
Sbjct: 83  YIITEYMENGSLVDFLK-----TPSGIKLTINKLLDMAAQIAEGMAFI 125

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 64.7 bits (158), Expect = 3e-13
 Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 18/122 (14%)

Query: 40  QGGYGVVYRGKLHEGRVA----AVKVLSE---SMGNGEEFINEVACISGTSHVNIVTPLG 92
           +G +G V   +L +   +    AVK+L     +  + EEF+ E AC+    H ++   +G
Sbjct: 33  KGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVG 92

Query: 93  ICCEG----------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLE 142
           +              ++  FM +G LH F+     +      L   TL   +V +A G+E
Sbjct: 93  VSLRSRAKGRLPIPMVILPFMKHGDLHAFLL-ASRIGENPFNLPLQTLVRFMVDIACGME 151

Query: 143 CL 144
            L
Sbjct: 152 YL 153

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 64.2 bits (157), Expect = 4e-13
 Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 23/127 (18%)

Query: 40  QGGYGVVYRGKLH-------EGRVAAVKVLSE--SMGNGEEFINEVACISGTSHVNIVTP 90
           +  +G VY+G L           VA +K L +       EEF +E    +   H N+V  
Sbjct: 19  EDRFGKVYKGHLFGPAPGEQTQAVA-IKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCL 77

Query: 91  LGICCEG----LVYEFMSNGSLHKF---------IYDKGSMSTKNNRLEWTTLSEIVVGV 137
           LG+  +     +++ + S+G LH+F         +       T  + LE      +V  +
Sbjct: 78  LGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQI 137

Query: 138 ARGLECL 144
           A G+E L
Sbjct: 138 AAGMEYL 144

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 64.3 bits (157), Expect = 4e-13
 Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 18/117 (15%)

Query: 40  QGGYGVVYRGKLH-----EGRVAAVKVL-SESMGNGEEFINEVACISGTSHVNIVTPLGI 93
           +G +G V   +        G V AVK L   +  +  +F  E+  +    H NIV   G+
Sbjct: 51  KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 110

Query: 94  CCEG------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           C         L+ E++  GSL  ++           R++   L +    + +G+E L
Sbjct: 111 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKE------RIDHIKLLQYTSQICKGMEYL 161

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 63.8 bits (156), Expect = 5e-13
 Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 19/122 (15%)

Query: 40  QGGYGVVYRGKLHEG-----RVAAVKVLSE---SMGNGEEFINEVACISGTSHVNIVTPL 91
           +G +G V  G L +      +VA VK +     S    EEF++E AC+   SH N++  L
Sbjct: 44  EGEFGSVMEGNLKQEDGTSLKVA-VKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLL 102

Query: 92  GICCEG---------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLE 142
           G+C E          ++  FM  G LH ++     + T    +   TL + +V +A G+E
Sbjct: 103 GVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYS-RLETGPKHIPLQTLLKFMVDIALGME 161

Query: 143 CL 144
            L
Sbjct: 162 YL 163

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 63.8 bits (156), Expect = 5e-13
 Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 18/117 (15%)

Query: 40  QGGYGVVYRGKLH-----EGRVAAVKVL-SESMGNGEEFINEVACISGTSHVNIVTPLGI 93
           +G +G V   +        G V AVK L   +  +  +F  E+  +    H NIV   G+
Sbjct: 20  KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 79

Query: 94  CCEG------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           C         L+ E++  GSL  ++           R++   L +    + +G+E L
Sbjct: 80  CYSAGRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYTSQICKGMEYL 130

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 63.0 bits (154), Expect = 8e-13
 Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 15/114 (13%)

Query: 40  QGGYGVVYRGKLHEGRVA----AVKVLSE--SMGNGEEFINEVACISGTSHVNIVTPLGI 93
           +G +G VY G     +      AVK   +  ++ N E+F++E   +    H +IV  +GI
Sbjct: 22  EGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI 81

Query: 94  CCEGLVY---EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
             E   +   E    G L  ++          N L+  TL    + + + +  L
Sbjct: 82  IEEEPTWIIMELYPYGELGHYLERNK------NSLKVLTLVLYSLQICKAMAYL 129

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 62.3 bits (152), Expect = 2e-12
 Identities = 23/114 (20%), Positives = 43/114 (37%), Gaps = 15/114 (13%)

Query: 40  QGGYGVVYRGKLHEGRVA----AVKVLSE--SMGNGEEFINEVACISGTSHVNIVTPLGI 93
           +G +G V++G            A+K      S    E+F+ E   +    H +IV  +G+
Sbjct: 25  EGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 84

Query: 94  CCEG---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
             E    ++ E  + G L  F+  +         L+  +L      ++  L  L
Sbjct: 85  ITENPVWIIMELCTLGELRSFLQVRK------YSLDLASLILYAYQLSTALAYL 132

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 62.6 bits (152), Expect = 2e-12
 Identities = 23/114 (20%), Positives = 43/114 (37%), Gaps = 15/114 (13%)

Query: 40  QGGYGVVYRGKLHEGRVA----AVKVLSE--SMGNGEEFINEVACISGTSHVNIVTPLGI 93
           +G +G V++G            A+K      S    E+F+ E   +    H +IV  +G+
Sbjct: 400 EGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 459

Query: 94  CCEG---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
             E    ++ E  + G L  F+  +         L+  +L      ++  L  L
Sbjct: 460 ITENPVWIIMELCTLGELRSFLQVRK------FSLDLASLILYAYQLSTALAYL 507

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 61.9 bits (151), Expect = 3e-12
 Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 19/124 (15%)

Query: 40  QGGYGVVYRGKLHEG---RVAAVKVLSE--SMGNGEEFINEVACISG-TSHVNIVTPLGI 93
           +G +G V + ++ +      AA+K + E  S  +  +F  E+  +     H NI+  LG 
Sbjct: 35  EGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGA 94

Query: 94  CCEG----LVYEFMSNGSLHKF---------IYDKGSMSTKNNRLEWTTLSEIVVGVARG 140
           C       L  E+  +G+L  F                ++  + L    L      VARG
Sbjct: 95  CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARG 154

Query: 141 LECL 144
           ++ L
Sbjct: 155 MDYL 158

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 61.5 bits (150), Expect = 3e-12
 Identities = 30/116 (25%), Positives = 41/116 (35%), Gaps = 17/116 (14%)

Query: 40  QGGYGVVYRGKLHEGRVA----AVKVLSE----SMGNGEEFINEVACISGTSHVNIVTPL 91
            G +GVV RG+           AVK L           ++FI EV  +    H N++   
Sbjct: 28  DGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 87

Query: 92  GICCEG---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           G+       +V E    GSL   +                TLS   V VA G+  L
Sbjct: 88  GVVLTPPMKMVTELAPLGSLLDRLRKHQ------GHFLLGTLSRYAVQVAEGMGYL 137

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 61.2 bits (149), Expect = 5e-12
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 17/116 (14%)

Query: 40  QGGYGVVYRGKLHEGRVA-----AVKVLSE--SMGNGEEFINEVACISGTSHVNIVTPLG 92
            G +G VY+G L           A+K L    +     +F+ E   +   SH NI+   G
Sbjct: 54  AGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEG 113

Query: 93  ICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           +  +     ++ E+M NG+L KF+ +K              L  ++ G+A G++ L
Sbjct: 114 VISKYKPMMIITEYMENGALDKFLREKD------GEFSVLQLVGMLRGIAAGMKYL 163

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 61.2 bits (149), Expect = 5e-12
 Identities = 33/134 (24%), Positives = 51/134 (38%), Gaps = 29/134 (21%)

Query: 40  QGGYGVVYRGKLH-----EGRVA-AVKVLSE--SMGNGEEFINEVACISGTSHVNIVTPL 91
           +G +G V++ +       E     AVK+L E  S     +F  E A ++   + NIV  L
Sbjct: 57  EGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLL 116

Query: 92  GICCEG----LVYEFMSNGSLHKF-----------------IYDKGSMSTKNNRLEWTTL 130
           G+C  G    L++E+M+ G L++F                        S     L     
Sbjct: 117 GVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQ 176

Query: 131 SEIVVGVARGLECL 144
             I   VA G+  L
Sbjct: 177 LCIARQVAAGMAYL 190

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 60.4 bits (147), Expect = 9e-12
 Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 16/115 (13%)

Query: 40  QGGYGVVYRGKL---HEGRVA-AVKVLSE--SMGNGEEFINEVACISGTSHVNIVTPLGI 93
            G  G V  G+L    +  V  A+K L    +     +F++E + +    H NI+   G+
Sbjct: 59  SGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGV 118

Query: 94  CCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
              G    +V E+M NGSL  F+           +     L  ++ GV  G+  L
Sbjct: 119 VTRGRLAMIVTEYMENGSLDTFLRTHD------GQFTIMQLVGMLRGVGAGMRYL 167

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 59.6 bits (145), Expect = 2e-11
 Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 19/118 (16%)

Query: 40  QGGYGVVYRGKLH-----EGRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLG 92
           +G +G V   +        G   AVK L    G  +  +   E+  +    H NIV   G
Sbjct: 31  EGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKG 90

Query: 93  ICCEG------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           IC E       L+ EF+ +GSL +++          N++      +  V + +G++ L
Sbjct: 91  ICTEDGGNGIKLIMEFLPSGSLKEYLPKNK------NKINLKQQLKYAVQICKGMDYL 142

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 59.7 bits (145), Expect = 2e-11
 Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 18/116 (15%)

Query: 40  QGGYGVVYRGKLH-----EGRVAAVKVLSE--SMGNGEEFINEVACISGTSHVNIVTPLG 92
            G +G V  G+L      E  VA +K L    +     +F+ E + +    H NI+   G
Sbjct: 55  AGEFGEVCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113

Query: 93  ICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           +  +     +V E+M NGSL  F+           +     L  ++ G+A G++ L
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMKYL 163

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 59.3 bits (144), Expect = 2e-11
 Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 18/117 (15%)

Query: 40  QGGYGVVYRGKLH-----EGRVAAVKVLSESMGNGE-EFINEVACISGTSHVNIVTPLGI 93
           +G +G V   +        G + AVK L  S  + + +F  E+  +       IV   G+
Sbjct: 33  KGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGV 92

Query: 94  CCEG------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
                     LV E++ +G L  F+    +      RL+ + L      + +G+E L
Sbjct: 93  SYGPGRQSLRLVMEYLPSGCLRDFLQRHRA------RLDASRLLLYSSQICKGMEYL 143

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 58.9 bits (143), Expect = 3e-11
 Identities = 26/129 (20%), Positives = 50/129 (38%), Gaps = 24/129 (18%)

Query: 40  QGGYGVVYRGKLH--------EGRVAAVKVLSESMGNGE--EFINEVACISG-TSHVNIV 88
           +G +G V   +          E    AVK+L +     +  + ++E+  +     H NI+
Sbjct: 91  EGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNII 150

Query: 89  TPLGICCEG----LVYEFMSNGSLHKF---------IYDKGSMSTKNNRLEWTTLSEIVV 135
             LG C +     ++ E+ S G+L ++          Y          ++ +  L     
Sbjct: 151 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY 210

Query: 136 GVARGLECL 144
            +ARG+E L
Sbjct: 211 QLARGMEYL 219

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 58.8 bits (143), Expect = 4e-11
 Identities = 26/129 (20%), Positives = 51/129 (39%), Gaps = 24/129 (18%)

Query: 40  QGGYGVVYRGKLH--------EGRVAAVKVLSE--SMGNGEEFINEVACISG-TSHVNIV 88
           +G +G V   +          E    AVK+L +  +  +  + ++E+  +     H NI+
Sbjct: 45  EGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNII 104

Query: 89  TPLGICCEG----LVYEFMSNGSLHKF---------IYDKGSMSTKNNRLEWTTLSEIVV 135
             LG C +     ++ E+ S G+L ++          Y          ++ +  L     
Sbjct: 105 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY 164

Query: 136 GVARGLECL 144
            +ARG+E L
Sbjct: 165 QLARGMEYL 173

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 57.7 bits (140), Expect = 7e-11
 Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 23/128 (17%)

Query: 40  QGGYGVVYRGKLH------EGRVAAVKVLSE--SMGNGEEFINEVACISG-TSHVNIVTP 90
           +G +G V              R  AVK+L E  +       ++E+  +     H+N+V  
Sbjct: 37  RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96

Query: 91  LGICCEG-----LVYEFMSNGSLHKF---------IYDKGSMSTKNNRLEWTTLSEIVVG 136
           LG C +      ++ EF   G+L  +          Y         + L    L      
Sbjct: 97  LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ 156

Query: 137 VARGLECL 144
           VA+G+E L
Sbjct: 157 VAKGMEFL 164

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 56.9 bits (138), Expect = 1e-10
 Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 12/84 (14%)

Query: 40  QGGYGVVYRGKLH-----EGRVA-AVKVLSESMGNGE--EFINEVACISGTSHVNIVTPL 91
           +G +G V +          G    AVK+L E+    E  + ++E   +   +H +++   
Sbjct: 33  EGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLY 92

Query: 92  GICCEG----LVYEFMSNGSLHKF 111
           G C +     L+ E+   GSL  F
Sbjct: 93  GACSQDGPLLLIVEYAKYGSLRGF 116

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 55.4 bits (134), Expect = 5e-10
 Identities = 28/125 (22%), Positives = 44/125 (35%), Gaps = 20/125 (16%)

Query: 40  QGGYGVVYRGKLH------EGRVAAVKVLSESMGNGE--EFINEVACISG-TSHVNIVTP 90
            G +G V                 AVK+L  +    E    ++E+  +S    H NIV  
Sbjct: 56  AGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNL 115

Query: 91  LGICCEG----LVYEFMSNGSLHKF-------IYDKGSMSTKNNRLEWTTLSEIVVGVAR 139
           LG C  G    ++ E+   G L  F       +    + +  N+      L      VA+
Sbjct: 116 LGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQ 175

Query: 140 GLECL 144
           G+  L
Sbjct: 176 GMAFL 180

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 55.1 bits (133), Expect = 7e-10
 Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 24/129 (18%)

Query: 40  QGGYGVVYRGKLH--------EGRVAAVKVLSE--SMGNGEEFINEVACISG-TSHVNIV 88
           +G +G V   +               AVK+L    +  +  + I+E+  +     H NI+
Sbjct: 79  EGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNII 138

Query: 89  TPLGICCEG----LVYEFMSNGSLHKF---------IYDKGSMSTKNNRLEWTTLSEIVV 135
             LG C +     ++ E+ S G+L ++          Y          +L    L     
Sbjct: 139 NLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAY 198

Query: 136 GVARGLECL 144
            VARG+E L
Sbjct: 199 QVARGMEYL 207

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 54.6 bits (132), Expect = 1e-09
 Identities = 30/129 (23%), Positives = 45/129 (34%), Gaps = 24/129 (18%)

Query: 40  QGGYGVVYRGKLH------EGRVAAVKVLSESMGNGE--EFINEVACISG-TSHVNIVTP 90
            G +G V     +           AVK+L  S    E    ++E+  +S   +H+NIV  
Sbjct: 33  AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 92

Query: 91  LGICCEG----LVYEFMSNGSLHKF-----------IYDKGSMSTKNNRLEWTTLSEIVV 135
           LG C  G    ++ E+   G L  F                 M      L+   L     
Sbjct: 93  LGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY 152

Query: 136 GVARGLECL 144
            VA+G+  L
Sbjct: 153 QVAKGMAFL 161

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 52.3 bits (126), Expect = 6e-09
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 13/85 (15%)

Query: 40  QGGYGVVYRGKLH------EGRVAAVKVLSESMGNGE--EFINEVACISG-TSHVNIVTP 90
            G +G V     +           AVK+L E   + E    ++E+  ++   SH NIV  
Sbjct: 55  SGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNL 114

Query: 91  LGICCEG----LVYEFMSNGSLHKF 111
           LG C       L++E+   G L  +
Sbjct: 115 LGACTLSGPIYLIFEYCCYGDLLNY 139

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 52.0 bits (125), Expect = 9e-09
 Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 19/121 (15%)

Query: 34  FSDKVRQGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEE---FINEVACISGTSHVNIVT 89
           F  ++ +G +  VY+G         A   L +      E   F  E   + G  H NIV 
Sbjct: 30  FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVR 89

Query: 90  PLGICCEG--------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGL 141
                           LV E M++G+L  ++        +   ++   L      + +GL
Sbjct: 90  FYDSWESTVKGKKCIVLVTELMTSGTLKTYL-------KRFKVMKIKVLRSWCRQILKGL 142

Query: 142 E 142
           +
Sbjct: 143 Q 143

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 48.8 bits (117), Expect = 1e-07
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 6/79 (7%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVK-VLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG 97
           +G YG+VY G+ L      A+K +        +    E+A      H NIV  LG   E 
Sbjct: 32  KGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN 91

Query: 98  ----LVYEFMSNGSLHKFI 112
               +  E +  GSL   +
Sbjct: 92  GFIKIFMEQVPGGSLSALL 110

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 48.5 bits (116), Expect = 1e-07
 Identities = 23/116 (19%), Positives = 51/116 (43%), Gaps = 15/116 (12%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKV--LSESMGNGEEFINEVACISGTSHVNIVTPLG 92
           +K+ +G +G V++G      +V A+K+  L E+    E+   E+  +S      +    G
Sbjct: 28  EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87

Query: 93  ICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
              +     ++ E++  GS    +        +   L+ T ++ I+  + +GL+ L
Sbjct: 88  SYLKDTKLWIIMEYLGGGSALDLL--------EPGPLDETQIATILREILKGLDYL 135

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 47.3 bits (113), Expect = 3e-07
 Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 12/119 (10%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKV--LSESMGNGEEFINEVACISGTSHVNIVTPLG 92
           + +  G   VV       +    A+K   L +   + +E + E+  +S   H NIV+   
Sbjct: 21  EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80

Query: 93  ICCEG----LVYEFMSNGSLH---KFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
                    LV + +S GS+    K I  KG    K+  L+ +T++ I+  V  GLE L
Sbjct: 81  SFVVKDELWLVMKLLSGGSVLDIIKHIVAKG--EHKSGVLDESTIATILREVLEGLEYL 137

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 47.2 bits (113), Expect = 4e-07
 Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 16/117 (13%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEFI----NEVACISGTSHVNIVTP 90
           DK+  GG   VY  +        A+K +       EE +     EV   S  SH NIV+ 
Sbjct: 17  DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76

Query: 91  LGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLEC 143
           + +  E     LV E++   +L ++I   G        L   T       +  G++ 
Sbjct: 77  IDVDEEDDCYYLVMEYIEGPTLSEYIESHG-------PLSVDTAINFTNQILDGIKH 126

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 46.9 bits (112), Expect = 4e-07
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 6/78 (7%)

Query: 37  KVRQGGYGVVYRGK-LHEGRVAAVKVLS-ESMGNGEEFINEVACISGTSHVNIVTPLGIC 94
           K+ QG  G VY    +  G+  A++ ++ +     E  INE+  +    + NIV  L   
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86

Query: 95  CEG----LVYEFMSNGSL 108
             G    +V E+++ GSL
Sbjct: 87  LVGDELWVVMEYLAGGSL 104

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 47.0 bits (112), Expect = 5e-07
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 6/79 (7%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKVLS-ESMGNGEEFINEVACISGTSHVNIVTPLGI 93
            K+ +G  G+V   +  H GR  AVK++        E   NEV  +    H N+V     
Sbjct: 51  VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110

Query: 94  CCEG----LVYEFMSNGSL 108
              G    ++ EF+  G+L
Sbjct: 111 YLVGEELWVLMEFLQGGAL 129

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 46.8 bits (111), Expect = 5e-07
 Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 13/112 (11%)

Query: 41  GGYGVVYRGK-LHEGRVAAVKVL---SESMGNGEEFINEVACISGTSHVNIVTPLGICCE 96
                V   +    G    V+ +   + S         E+      +H NIV        
Sbjct: 38  EDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA 97

Query: 97  G----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
                +V  FM+ GS    I      +   + +    ++ I+ GV + L+ +
Sbjct: 98  DNELWVVTSFMAYGSAKDLIC-----THFMDGMNELAIAYILQGVLKALDYI 144

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 46.9 bits (112), Expect = 5e-07
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 6/79 (7%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKVLS-ESMGNGEEFINEVACISGTSHVNIVTPLGI 93
            ++  G +G VY+ K    G +AA KV+  +S    E++I E+  ++   H  IV  LG 
Sbjct: 25  GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 84

Query: 94  CCEG----LVYEFMSNGSL 108
                   ++ EF   G++
Sbjct: 85  YYHDGKLWIMIEFCPGGAV 103

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 46.5 bits (110), Expect = 7e-07
 Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 14/87 (16%)

Query: 40  QGGYGVVYRGKLH------EGRVAAVKVLSESMGNGE--EFINEVACISG-TSHVNIVTP 90
           +G +G V              R  AVK+L E   + E    ++E+  +     H+N+V  
Sbjct: 32  RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91

Query: 91  LGICCEG-----LVYEFMSNGSLHKFI 112
           LG C +      ++ EF   G+L  ++
Sbjct: 92  LGACTKPGGPLMVIVEFCKFGNLSTYL 118

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 46.2 bits (110), Expect = 8e-07
 Identities = 18/117 (15%), Positives = 43/117 (36%), Gaps = 20/117 (17%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG- 97
           QG +G V + +   + R  A+K +  +       ++EV  ++  +H  +V       E  
Sbjct: 16  QGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERR 75

Query: 98  ----------------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVA 138
                           +  E+  NG+L+  I+ +     ++         +I+  ++
Sbjct: 76  NFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL--FRQILEALS 130

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 45.9 bits (109), Expect = 1e-06
 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 9/85 (10%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG- 97
           +G +G V+R K    G   AVK +   +   EE    +   +G S   IV   G   EG 
Sbjct: 68  RGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE----LVACAGLSSPRIVPLYGAVREGP 123

Query: 98  ---LVYEFMSNGSLHKFIYDKGSMS 119
              +  E +  GSL + I   G + 
Sbjct: 124 WVNIFMELLEGGSLGQLIKQMGCLP 148

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 45.8 bits (109), Expect = 1e-06
 Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 16/116 (13%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKV--LSESMGNGEEFINEVACISGTSHVNIVTPLG 92
           +K+ +G YG VY+      G++ A+K   +   +   +E I E++ +      ++V   G
Sbjct: 35  EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL---QEIIKEISIMQQCDSPHVVKYYG 91

Query: 93  ICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
              +     +V E+   GS+         +  +N  L    ++ I+    +GLE L
Sbjct: 92  SYFKNTDLWIVMEYCGAGSVSDI------IRLRNKTLTEDEIATILQSTLKGLEYL 141

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 15/116 (12%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVK-VLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG 97
           +GG+  V   + LH+G   A+K +L     + EE   E       +H NI+  +  C   
Sbjct: 39  EGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRE 98

Query: 98  --------LVYEFMSNGSLHKFIYDKGSMSTKNNRL-EWTTLSEIVVGVARGLECL 144
                   L+  F   G+L   I     +  K N L E   L  +++G+ RGLE +
Sbjct: 99  RGAKHEAWLLLPFFKRGTLWNEIE---RLKDKGNFLTEDQILW-LLLGICRGLEAI 150

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 45.1 bits (107), Expect = 2e-06
 Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 17/92 (18%)

Query: 40  QGGYGVVYRGKLHE--GRVAAVKVL--SESMGNGEEFINEVACISGTSHVNIV------- 88
           QG    V+RG+ H+  G + A+KV      +   +  + E   +   +H NIV       
Sbjct: 19  QGATANVFRGR-HKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEE 77

Query: 89  --TPLGICCEGLVYEFMSNGSLHKFIYDKGSM 118
             T        L+ EF   GSL+  + +  + 
Sbjct: 78  ETTTRHKV---LIMEFCPCGSLYTVLEEPSNA 106

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 44.7 bits (106), Expect = 2e-06
 Identities = 19/117 (16%), Positives = 40/117 (34%), Gaps = 19/117 (16%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVKV--LSESMGNGEEFINEVACISGTSHVNIVT------- 89
           +GG+GVV+  K   +    A+K   L       E+ + EV  ++   H  IV        
Sbjct: 15  RGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLE 74

Query: 90  ------PLGICCEGLVY---EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGV 137
                       +  +Y   +     +L  ++  + ++  +   +      +I   V
Sbjct: 75  KNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAV 131

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 44.7 bits (106), Expect = 3e-06
 Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 17/121 (14%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEFINEVACISGTS-HVNIVTPLGI 93
           + V  G YG VY+G+ +  G++AA+KV+  +    EE   E+  +   S H NI T  G 
Sbjct: 30  ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89

Query: 94  CCEG----------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLEC 143
             +           LV EF   GS+   I      +TK N L+   ++ I   + RGL  
Sbjct: 90  FIKKNPPGMDDQLWLVMEFCGAGSVTDLI-----KNTKGNTLKEEWIAYICREILRGLSH 144

Query: 144 L 144
           L
Sbjct: 145 L 145

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 44.3 bits (104), Expect = 4e-06
 Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 15/91 (16%)

Query: 40  QGGYGVVYRGKLHE--GRVAAVKVLSE--SMGNGEEFINEVACISGTSHVNIV------- 88
            GG+G V R   H+  G   A+K   +  S  N E +  E+  +   +H N+V       
Sbjct: 24  TGGFGYVLRWI-HQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPD 82

Query: 89  TPLGICCEGLVY---EFMSNGSLHKFIYDKG 116
               +    L     E+   G L K++    
Sbjct: 83  GLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE 113

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 43.8 bits (104), Expect = 6e-06
 Identities = 23/114 (20%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVKV--LSESMGNGE--EFINEVACISGTSHVNIVTPLGIC 94
           +G +  VYR   L +G   A+K   + + M      + I E+  +   +H N++      
Sbjct: 42  RGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASF 101

Query: 95  CEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
            E     +V E    G L + I        +   +   T+ +  V +   LE +
Sbjct: 102 IEDNELNIVLELADAGDLSRMIKHFKK---QKRLIPERTVWKYFVQLCSALEHM 152

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 43.7 bits (103), Expect = 6e-06
 Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 17/92 (18%)

Query: 40  QGGYGVVYRGKLHE--GRVAAVKVL--SESMGNGEEFINEVACISGTSHVNIV------- 88
           QG    V+RG+ H+  G + A+KV      +   +  + E   +   +H NIV       
Sbjct: 19  QGATANVFRGR-HKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEE 77

Query: 89  --TPLGICCEGLVYEFMSNGSLHKFIYDKGSM 118
             T        L+ EF   GSL+  + +  + 
Sbjct: 78  ETTTRHKV---LIMEFCPCGSLYTVLEEPSNA 106

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 42.9 bits (102), Expect = 9e-06
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 11/77 (14%)

Query: 36  DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFIN-----EVACISGTSHVNIVTP 90
           +KV +G YGVVY+ K  +GR+ A+K +   +   +E I      E++ +    H NIV+ 
Sbjct: 27  EKVGEGTYGVVYKAKDSQGRIVALKRI--RLDAEDEGIPSTAIREISLLKELHHPNIVSL 84

Query: 91  LGICCEG----LVYEFM 103
           + +        LV+EFM
Sbjct: 85  IDVIHSERCLTLVFEFM 101

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 13/97 (13%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEFIN-----EVACISGTSHVNIVT 89
            K+ +G YG VY+          A+K +   + + EE +      EV+ +    H NI+ 
Sbjct: 40  TKLGEGTYGEVYKAIDTVTNETVAIKRI--RLEHEEEGVPGTAIREVSLLKELQHRNIIE 97

Query: 90  PLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKN 122
              +        L++E+  N  L K++     +S + 
Sbjct: 98  LKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRV 133

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 42.8 bits (101), Expect = 1e-05
 Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 13/117 (11%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKVLS-ESMGNGE--EFINEVACISGTSHVNIVTPL 91
            K+ +G +G     K   +GR   +K ++   M + E  E   EVA ++   H NIV   
Sbjct: 30  QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89

Query: 92  GICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
               E     +V ++   G L K I  +     K    +   + +  V +   L+ +
Sbjct: 90  ESFEENGSLYIVMDYCEGGDLFKRINAQ-----KGVLFQEDQILDWFVQICLALKHV 141

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 42.9 bits (101), Expect = 1e-05
 Identities = 15/88 (17%), Positives = 36/88 (40%), Gaps = 8/88 (9%)

Query: 40  QGGYGVVYRGKLHEGRVAAVKVLSESMGNGEE---FINEVACISGTSH--VNIVTPLGIC 94
            GG   V++    + ++ A+K ++    + +    + NE+A ++        I+      
Sbjct: 66  SGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 125

Query: 95  -CEGLVYEFM--SNGSLHKFIYDKGSMS 119
             +  +Y  M   N  L+ ++  K S+ 
Sbjct: 126 ITDQYIYMVMECGNIDLNSWLKKKKSID 153

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 42.8 bits (101), Expect = 1e-05
 Identities = 15/88 (17%), Positives = 36/88 (40%), Gaps = 8/88 (9%)

Query: 40  QGGYGVVYRGKLHEGRVAAVKVLSESMGNGEE---FINEVACISGTSH--VNIVTPLGIC 94
            GG   V++    + ++ A+K ++    + +    + NE+A ++        I+      
Sbjct: 19  SGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 78

Query: 95  -CEGLVYEFM--SNGSLHKFIYDKGSMS 119
             +  +Y  M   N  L+ ++  K S+ 
Sbjct: 79  ITDQYIYMVMECGNIDLNSWLKKKKSID 106

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 9/93 (9%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKVLS----ESMGNGEEFINEVACISGTSHVNIVTP 90
            ++  G +G VY  + +    V A+K +S    +S    ++ I EV  +    H N +  
Sbjct: 60  REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119

Query: 91  LGICCEG----LVYEFMSNGSLHKFIYDKGSMS 119
            G         LV E+    +       K  + 
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQ 152

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 13/91 (14%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEFIN-----EVACISGTSHVNIVT 89
           +K+ +G YGVVY+ +    G V A+K +   +    E +      E++ +   +H NIV 
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVK 66

Query: 90  PLGICCEG----LVYEFMSNGSLHKFIYDKG 116
            L +        LV+EF+    L KF+    
Sbjct: 67  LLDVIHTENKLYLVFEFLHQ-DLKKFMDASA 96

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 11/77 (14%)

Query: 36  DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFIN-----EVACISGTSHVNIVTP 90
           +K+ +G YGVVY+ + + G   A+K +   +   +E I      E++ +    H NIV  
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKI--RLEKEDEGIPSTTIREISILKELKHSNIVKL 65

Query: 91  LGICCEG----LVYEFM 103
             +        LV+E +
Sbjct: 66  YDVIHTKKRLVLVFEHL 82

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 17/92 (18%), Positives = 37/92 (40%), Gaps = 16/92 (17%)

Query: 40  QGGYGVVYRGKLHEGRVAAVKVLSESMGNGEE---FINEVACISGTSH--VNIV------ 88
            GG   V++    + ++ A+K ++    + +    + NE+A ++        I+      
Sbjct: 38  SGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97

Query: 89  -TPLGICCEGLVYEFMSNGSLHKFIYDKGSMS 119
            T   I    +V E   N  L+ ++  K S+ 
Sbjct: 98  ITDQYIY---MVMEC-GNIDLNSWLKKKKSID 125

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 41.5 bits (98), Expect = 3e-05
 Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 20/117 (17%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEFI----NEVACISGTSHVNIV------ 88
            GG   V+  + L + R  AVKVL   +     F      E    +  +H  IV      
Sbjct: 22  FGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTG 81

Query: 89  --TPLGICCEGLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLEC 143
                      +V E++   +L   ++ +G M+ K        + E++    + L  
Sbjct: 82  EAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK------RAI-EVIADACQALNF 131

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 41.2 bits (97), Expect = 4e-05
 Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 12/112 (10%)

Query: 40  QGGYGVVYRG-KLHEGRVAAVKVLS-ESMGNGEE--FINEVACISGTS-HVNIVTPLGIC 94
            G +G V++  K  +G + A+K       G+ +E   + EV   +    H ++V      
Sbjct: 21  SGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAW 80

Query: 95  CEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLE 142
            E     +  E+ + GSL   I +        +  +   L ++++ V RGL 
Sbjct: 81  AEDDHMLIQNEYCNGGSLADAISENYR---IMSYFKEAELKDLLLQVGRGLR 129

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 41.0 bits (97), Expect = 5e-05
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 12/90 (13%)

Query: 36  DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEF----INEVACISGTSHVNIVTP 90
           DK+ +G Y  VY+GK      + A+K +   + + E      I EV+ +    H NIVT 
Sbjct: 8   DKLGEGTYATVYKGKSKLTDNLVALKEI--RLEHEEGAPCTAIREVSLLKDLKHANIVTL 65

Query: 91  LGICCEG----LVYEFMSNGSLHKFIYDKG 116
             I        LV+E++    L +++ D G
Sbjct: 66  HDIIHTEKSLTLVFEYLDK-DLKQYLDDCG 94

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 40.6 bits (96), Expect = 6e-05
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 12/96 (12%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEF----INEVACISGTSHVNIVTP 90
           +K+  G Y  VY+G     G   A+K +   + + E      I E++ +    H NIV  
Sbjct: 11  EKLGNGTYATVYKGLNKTTGVYVALKEV--KLDSEEGTPSTAIREISLMKELKHENIVRL 68

Query: 91  LGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKN 122
             +        LV+EFM N  L K++  +   +T  
Sbjct: 69  YDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPR 103

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 40.6 bits (95), Expect = 8e-05
 Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 14/112 (12%)

Query: 40  QGGYGVVYRGKL-HEGRVAAVKV--LSESMGNGEEFINEVACISGTSHVNIVTPLG-ICC 95
            G  GVV++      G V A K+  L        + I E+  +   +   IV   G    
Sbjct: 43  AGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 102

Query: 96  EGLVY---EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           +G +    E M  GSL + +   G       R+    L ++ + V +GL  L
Sbjct: 103 DGEISICMEHMDGGSLDQVLKKAG-------RIPEQILGKVSIAVIKGLTYL 147

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 40.3 bits (95), Expect = 9e-05
 Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 17/93 (18%)

Query: 26  DVKKMTNSFS--DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEF--------IN 74
           DVK     +   D + +G +  VY+ +     ++ A+K +   +G+  E         + 
Sbjct: 4   DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKI--KLGHRSEAKDGINRTALR 61

Query: 75  EVACISGTSHVNIVTPLGICCEG----LVYEFM 103
           E+  +   SH NI+  L          LV++FM
Sbjct: 62  EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 40.2 bits (95), Expect = 1e-04
 Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 13/92 (14%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEFIN-----EVACISGTSHVNIVT 89
           +K+ +G YG V++ K      + A+K +   + + +E +      E+  +    H NIV 
Sbjct: 8   EKIGEGTYGTVFKAKNRETHEIVALKRV--RLDDDDEGVPSSALREICLLKELKHKNIVR 65

Query: 90  PLGICCEG----LVYEFMSNGSLHKFIYDKGS 117
              +        LV+EF     L K+      
Sbjct: 66  LHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNG 96

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 27/120 (22%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIV---------- 88
            GG+G V++ K   +G+   +K +     N E+   EV  ++   HVNIV          
Sbjct: 21  SGGFGQVFKAKHRIDGKTYVIKRVKY---NNEKAEREVKALAKLDHVNIVHYNGCWDGFD 77

Query: 89  -------TPLGICCEGLVY---EFMSNGSLHKFIYD-KGSMSTKNNRLEWTTLSEIVVGV 137
                            ++   EF   G+L ++I   +G    K   LE     +I  GV
Sbjct: 78  YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL--FEQITKGV 135

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 18/95 (18%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLS-------ESMGNGEEFINEVACISGTSHVNIV--- 88
            G + +V + +    G   A K +              EE   EV+ +    H NI+   
Sbjct: 22  SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLH 81

Query: 89  ----TPLGICCEGLVYEFMSNGSLHKFIYDKGSMS 119
                   +    L+ E +S G L  F+  K S+S
Sbjct: 82  DVYENRTDVV---LILELVSGGELFDFLAQKESLS 113

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 11/113 (9%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKV--LSESMGNGEEFINEVA-CISGTSHVNIVTPLGIC- 94
           +G YG V +      G++ AVK    +      ++ + ++   +  +    IV   G   
Sbjct: 32  RGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALF 91

Query: 95  CEGLVY---EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
            EG  +   E M + S  KF   K   S  ++ +    L +I +   + L  L
Sbjct: 92  REGDCWICMELM-STSFDKFY--KYVYSVLDDVIPEEILGKITLATVKALNHL 141

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 22/115 (19%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEFI----NEVACISGTSHVNIVTPLGI- 93
           +GG G VY  +     R+ A+K++SE++ +   F      E          ++V    I 
Sbjct: 44  RGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVV---PIH 100

Query: 94  ---CCEGLVY---EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLE 142
                +G +Y     ++   L   +  +G ++          +  IV  +   L+
Sbjct: 101 DFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPP------RAV-AIVRQIGSALD 148

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 18/95 (18%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLS-------ESMGNGEEFINEVACISGTSHVNIV--- 88
            G + +V + +    G   A K +            + EE   EV+ +    H N++   
Sbjct: 22  SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLH 81

Query: 89  ----TPLGICCEGLVYEFMSNGSLHKFIYDKGSMS 119
                   +    L+ E +S G L  F+  K S+S
Sbjct: 82  DVYENRTDVV---LILELVSGGELFDFLAQKESLS 113

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 11/110 (10%)

Query: 34  FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLS------ESMGNGEEFINEVACISGTSHVN 86
               + QG YGVV     ++   + A+K+++       +  + E    EV  +    H N
Sbjct: 30  LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPN 89

Query: 87  IVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSE 132
           I     +  +     LV E    G L   +      ST    ++      
Sbjct: 90  IARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQI 139

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 26/110 (23%)

Query: 15  GSLAPKGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFI 73
            +   +   Y++ K         +  G +GVV++ KL E   VA  KVL +     + F 
Sbjct: 33  KTGEQREIAYTNCKV--------IGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFK 79

Query: 74  N-EVACISGTSHVNIVTPLGICCEG----------LVYEFMSNGSLHKFI 112
           N E+  +    H N+V                   LV E++   ++++  
Sbjct: 80  NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRAS 128

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 19/87 (21%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVK-VLSESMGNGEEFIN-----EVAC---ISGTSHV 85
            ++  G YG VY+ +  H G   A+K V   + G G   +      EVA    +    H 
Sbjct: 15  AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHP 74

Query: 86  NIVTPLGICCEG---------LVYEFM 103
           N+V  + +C            LV+E +
Sbjct: 75  NVVRLMDVCATSRTDREIKVTLVFEHV 101

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 39.0 bits (91), Expect = 3e-04
 Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 6/89 (6%)

Query: 33  SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFI-NEVACISGTSHVNIVTP 90
              +++  G +GVV+R      G   A K +     + +E +  E+  +S   H  +V  
Sbjct: 160 DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL 219

Query: 91  LGICCEG----LVYEFMSNGSLHKFIYDK 115
                +     ++YEFMS G L + + D+
Sbjct: 220 HDAFEDDNEMVMIYEFMSGGELFEKVADE 248

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 33  SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLS----ESMGNGEEFINEVACISGTSHVNI 87
                + +G +G V   K    G+  AVKV+S    +   + E  + EV  +    H NI
Sbjct: 29  KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 88

Query: 88  VTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMS 119
           +       +     LV E  + G L   I  +   S
Sbjct: 89  MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS 124

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 38.3 bits (89), Expect = 4e-04
 Identities = 17/97 (17%), Positives = 31/97 (31%), Gaps = 3/97 (3%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVKV--LSESMGNGEEFINEVACISGTSHVNIVTPLGICCE 96
           +GG+GVV+  K   +    A+K   L       E+ + EV  ++   H  IV       E
Sbjct: 16  RGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLE 75

Query: 97  GLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEI 133
               ++           +       +         +I
Sbjct: 76  TPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKI 112

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 38.6 bits (90), Expect = 4e-04
 Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 10/76 (13%)

Query: 37  KVRQGGYGVVYRGKLHE---GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGI 93
           KV +G YG VY+ K  +    +  A+K + E  G       E+A +    H N+++   +
Sbjct: 28  KVGRGTYGHVYKAKRKDGKDDKDYALKQI-EGTGISMSACREIALLRELKHPNVISLQKV 86

Query: 94  CCEG------LVYEFM 103
                     L++++ 
Sbjct: 87  FLSHADRKVWLLFDYA 102

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 38.5 bits (89), Expect = 4e-04
 Identities = 8/54 (14%), Positives = 15/54 (27%), Gaps = 5/54 (9%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVKVLS----ESMGNGEEFINEVACISGTSHVNIV 88
            G   VV+  + +      A+KV +     S    E         +     +  
Sbjct: 72  VGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPE 125

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 18/95 (18%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLS-------ESMGNGEEFINEVACISGTSHVNIV--- 88
            G + +V + +    G+  A K +            + EE   EV  +    H NI+   
Sbjct: 15  SGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLH 74

Query: 89  ----TPLGICCEGLVYEFMSNGSLHKFIYDKGSMS 119
                   +    L+ E +S G L  F+ +K S++
Sbjct: 75  DIFENKTDVV---LILELVSGGELFDFLAEKESLT 106

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 38.0 bits (89), Expect = 5e-04
 Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 5/82 (6%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG- 97
           +G +G+V+R       +    K +     +      E++ ++   H NI+          
Sbjct: 15  RGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESME 74

Query: 98  ---LVYEFMSNGSLHKFIYDKG 116
              +++EF+S   + + I    
Sbjct: 75  ELVMIFEFISGLDIFERINTSA 96

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 38.0 bits (89), Expect = 5e-04
 Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 9/85 (10%)

Query: 36  DKVRQGGYGVVYRGKLHE-GRVAAVK-VLSESMGNGEEFIN--EVACISGTSHVNIVTPL 91
             V +G YG+V + +  + GR+ A+K  L        + I   E+  +    H N+V  L
Sbjct: 31  GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL 90

Query: 92  GICCEG----LVYEFMSNGSLHKFI 112
            +C +     LV+EF+ + ++   +
Sbjct: 91  EVCKKKKRWYLVFEFVDH-TILDDL 114

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 38.1 bits (89), Expect = 5e-04
 Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 8/95 (8%)

Query: 33  SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEE---FINEVACISGTSHVNIV 88
               K+  G YG V   +        A+K++ ++  +       + EVA +    H NI+
Sbjct: 40  QRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIM 99

Query: 89  TPLGICCEG----LVYEFMSNGSLHKFIYDKGSMS 119
                  +     LV E    G L   I  +   +
Sbjct: 100 KLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFN 134

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)

Query: 36  DKVRQGGYGVVYRGKLHE-GRVAAVK-VLSESMGNGEEFIN--EVACISGTSHVNIVTPL 91
            K+ +G YGVV++ +  + G++ A+K  L        + I   E+  +    H N+V  L
Sbjct: 9   GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLL 68

Query: 92  GICCEG----LVYEFM 103
            +        LV+E+ 
Sbjct: 69  EVFRRKRRLHLVFEYC 84

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 37.6 bits (87), Expect = 7e-04
 Identities = 16/95 (16%), Positives = 27/95 (28%), Gaps = 15/95 (15%)

Query: 40  QGGYGVVYRGK------LHEGRVAAVKVLSESMGNGEEF---INEVACISGTSHVNIVTP 90
           +G +  VY             +   +KV   +  N  EF      +  +  +     +  
Sbjct: 75  EGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKF 132

Query: 91  LGICCEG----LVYEFMSNGSLHKFIYDKGSMSTK 121
                      LV E  S G+L   I    +   K
Sbjct: 133 YSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEK 167

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 37.6 bits (88), Expect = 7e-04
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 14/85 (16%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVKVLS-ESMGNGE--EFINEVACISGTSHVNIVT------ 89
            G YG   + +   +G++   K L   SM   E    ++EV  +    H NIV       
Sbjct: 16  TGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRII 75

Query: 90  --PLGICCEGLVYEFMSNGSLHKFI 112
                     +V E+   G L   I
Sbjct: 76  DRTNTTLY--IVMEYCEGGDLASVI 98

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 37.8 bits (88), Expect = 7e-04
 Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 6/83 (7%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLS-ESMGNGEEFINEVACISGTSHVNIVTPLGICCEG 97
            G +GVV+R      GRV   K ++     +     NE++ ++   H  ++       + 
Sbjct: 61  SGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK 120

Query: 98  ----LVYEFMSNGSLHKFIYDKG 116
               L+ EF+S G L   I  + 
Sbjct: 121 YEMVLILEFLSGGELFDRIAAED 143

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 37.6 bits (88), Expect = 8e-04
 Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 18/95 (18%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVL-------SESMGNGEEFINEVACISGTSHVNIV--- 88
            G + VV + +    G   A K +       S    + E+   EV+ +    H N++   
Sbjct: 21  SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH 80

Query: 89  ----TPLGICCEGLVYEFMSNGSLHKFIYDKGSMS 119
                   +    L+ E ++ G L  F+ +K S++
Sbjct: 81  EVYENKTDVI---LILELVAGGELFDFLAEKESLT 112

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 37.7 bits (88), Expect = 8e-04
 Identities = 22/99 (22%), Positives = 35/99 (35%), Gaps = 11/99 (11%)

Query: 34  FSDKVRQGGYGVVYRGKLHE-GRVAAVKV------LSESMGNGEEFINEVACISGTSHVN 86
             + + +G + VV R    E G+  AVK+       S    + E+   E +      H +
Sbjct: 28  LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPH 87

Query: 87  IVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTK 121
           IV  L          +V+EFM    L   I  +      
Sbjct: 88  IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV 126

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	156
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.94
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.94
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.94
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.93
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.93
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.92
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.92
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.92
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.92
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.91
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.91
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.9
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.9
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.9
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.9
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.88
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.88
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.85
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.85
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.85
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.85
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.84
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.84
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.84
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.84
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.83
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.83
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.83
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.83
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.83
3uqc_A	286	Probable conserved transmembrane protein; structur	99.83
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.83
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.83
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.83
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.82
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.82
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.82
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.82
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.82
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.82
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.82
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.82
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.82
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.82
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.82
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.81
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.81
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.81
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.81
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.81
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.81
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.81
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.81
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.81
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.81
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.8
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.8
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.8
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.8
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.8
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.8
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.8
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.8
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.8
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.8
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.8
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.8
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.8
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.8
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.8
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.8
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.8
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.79
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.79
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.79
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.79
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.79
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.79
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.79
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.79
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.79
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.79
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.79
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.79
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.79
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.79
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.79
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.79
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.79
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.79
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.79
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.79
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.79
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.79
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.79
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.78
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.78
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.78
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.78
3niz_A	311	Rhodanese family protein; structural genomics, str	99.78
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.78
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.78
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.78
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.78
3bhy_A	283	Death-associated protein kinase 3; death associate	99.78
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.78
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.78
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.78
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.78
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.78
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.78
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.78
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.78
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.78
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.78
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.78
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.78
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.78
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.78
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.78
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.77
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.77
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.77
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.77
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.77
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.77
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.77
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.77
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.77
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.77
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.77
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.77
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.77
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.77
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.77
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.77
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.77
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.77
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.77
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.77
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.77
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.77
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.76
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.76
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.76
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.76
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.76
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.76
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.76
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.76
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.76
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.76
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.76
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.76
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.76
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.76
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.76
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.76
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.76
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.76
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.76
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.76
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.76
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.76
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.76
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.76
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.76
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.76
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.75
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.75
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.75
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.75
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.75
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.75
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.75
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.75
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.75
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.75
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.75
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.75
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.75
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.75
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.74
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.74
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.74
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.74
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.74
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.74
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.74
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.74
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.74
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.74
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.74
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.73
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.73
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.73
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.73
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.73
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.73
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.73
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.73
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.73
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.73
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.73
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.73
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.72
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.72
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.72
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.72
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.72
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.72
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.72
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.71
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.71
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.71
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.71
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.71
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.71
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.71
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.71
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.71
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.7
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.7
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.7
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.7
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.7
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.7
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.7
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.7
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.7
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.69
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.69
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.69
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.69
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.69
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.69
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.68
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.68
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.68
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.67
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.67
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.67
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.66
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.65
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.65
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.65
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.65
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.64
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.61
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.55
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.53
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.52
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.43
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.4
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.19
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.82
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.4
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.29
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	97.24
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	96.34
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	95.33
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	95.03
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	94.75
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	94.47
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	92.51
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	92.11
3ats_A	357	Putative uncharacterized protein; hypothetical pro	91.86
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	91.58
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	90.61
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	89.83
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	86.58
3mes_A	424	Choline kinase; malaria, structural genomics, stru	84.47
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	80.65

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.94  E-value=1.8e-26  Score=163.35  Aligned_cols=133  Identities=23%  Similarity=0.428  Sum_probs=107.9

Q ss_pred             ChHHHHhhhhhhhhccccccCceEEEEEeC------CCcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceee
Q 047548           23 NYSDVKKMTNSFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGIC   94 (156)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~   94 (156)
                      ...++......|.+.||+|+||.||+|.+.      .+..||+|.++....  ..+.|.+|+.++..++||||+++++++
T Consensus        19 ~~~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~   98 (308)
T 4gt4_A           19 KLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVV   98 (308)
T ss_dssp             CCCBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CcccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEE
Confidence            344555555667889999999999999863      257899999975432  236799999999999999999999999


Q ss_pred             ecc----eeeecCCCCChHHHhhhcCCCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           95 CEG----LVYEFMSNGSLHKFIYDKGSMST---------KNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        95 ~~~----lv~e~~~~g~L~~~l~~~~~~~~---------~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ...    +|+||+++|+|.++|........         ....+++..+..++.|++.||.|||+++++|+|+-
T Consensus        99 ~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK  172 (308)
T 4gt4_A           99 TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLA  172 (308)
T ss_dssp             CSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence            876    99999999999999975432111         12357889999999999999999999999999984

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.94  E-value=3.2e-26  Score=161.79  Aligned_cols=123  Identities=27%  Similarity=0.400  Sum_probs=104.8

Q ss_pred             HHHHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc---e
Q 047548           25 SDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG---L   98 (156)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~---l   98 (156)
                      |+++.....+.+.||+|+||.||+|.+.  ..||+|+++......   +.+.+|+.+++.++||||+++++++..+   +
T Consensus        31 Wei~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~i  108 (307)
T 3omv_A           31 WEIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAI  108 (307)
T ss_dssp             CBCCTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEE
T ss_pred             cEEcHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEE
Confidence            4455555567789999999999999875  368999987543332   5789999999999999999999988766   9


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||||+++|+|.+++...      ...+++..+..++.|++.||.|||+++++|+||-
T Consensus       109 VmEy~~gGsL~~~l~~~------~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlK  159 (307)
T 3omv_A          109 VTQWCEGSSLYKHLHVQ------ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMK  159 (307)
T ss_dssp             EEECCSSCBHHHHHHTS------CCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCC
T ss_pred             EEEcCCCCCHHHHHhhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccC
Confidence            99999999999999754      3458899999999999999999999999999984

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.94  E-value=3.7e-26  Score=161.10  Aligned_cols=129  Identities=24%  Similarity=0.458  Sum_probs=103.4

Q ss_pred             HHhhhhhhhhccccccCceEEEEEeC------CCcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc--
Q 047548           27 VKKMTNSFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG--   97 (156)
Q Consensus        27 ~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~--   97 (156)
                      +.+....+.+.||+|+||.||+|.+.      ++..||+|.++..... .+.+.+|+.+++.++||||+++++++...  
T Consensus        10 I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~   89 (299)
T 4asz_A           10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP   89 (299)
T ss_dssp             CCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             cCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence            33344456789999999999999864      2678999999764332 26799999999999999999999999876  


Q ss_pred             --eeeecCCCCChHHHhhhcCC------CCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 --LVYEFMSNGSLHKFIYDKGS------MSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 --lv~e~~~~g~L~~~l~~~~~------~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                        +||||+++|+|.++|...+.      .......+++..+..++.|++.||.|||+++++|+||-
T Consensus        90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlK  155 (299)
T 4asz_A           90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLA  155 (299)
T ss_dssp             EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccC
Confidence              99999999999999976420      00113458899999999999999999999999999984

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.93  E-value=2.1e-25  Score=159.20  Aligned_cols=123  Identities=25%  Similarity=0.465  Sum_probs=102.4

Q ss_pred             hhhhccccccCceEEEEEeC------CCcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           33 SFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~------~~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      .+.++||+|+||.||+|.+.      .+..||+|.++..... .+.+.+|+.++..++||||+++++++...    +|||
T Consensus        44 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E  123 (329)
T 4aoj_A           44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFE  123 (329)
T ss_dssp             EEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             EEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            44578999999999999864      2678999999764332 26799999999999999999999999876    9999


Q ss_pred             cCCCCChHHHhhhcCCCC--------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMS--------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~--------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++|+|.++++......        .....+++..+..++.|++.||.|||+++++|+|+-
T Consensus       124 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK  185 (329)
T 4aoj_A          124 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLA  185 (329)
T ss_dssp             CCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             cCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeeccccc
Confidence            999999999997643110        012358899999999999999999999999999984

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.93  E-value=2.8e-25  Score=159.22  Aligned_cols=119  Identities=24%  Similarity=0.226  Sum_probs=97.6

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      +.+.+.||+|+||.||++.... ++.||+|++.......   +.+.+|+.++..++||||+++++++.+.    +||||+
T Consensus        26 Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~  105 (350)
T 4b9d_A           26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYC  105 (350)
T ss_dssp             EEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             eEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            4456789999999999999765 8999999997644332   5689999999999999999999999877    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|+|.+++....     ...+++..+..++.|++.||.|||+++++|+||-
T Consensus       106 ~gg~L~~~i~~~~-----~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlK  152 (350)
T 4b9d_A          106 EGGDLFKRINAQK-----GVLFQEDQILDWFVQICLALKHVHDRKILHRDIK  152 (350)
T ss_dssp             TTCBHHHHHHHTT-----TCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCC
T ss_pred             CCCcHHHHHHHcC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCC
Confidence            9999999997543     3447889999999999999999999999999983

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.92  E-value=1.2e-24  Score=152.75  Aligned_cols=116  Identities=22%  Similarity=0.289  Sum_probs=100.0

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc--------eee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG--------LVY  100 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~--------lv~  100 (156)
                      .+.++||+|+||.||+|.... +..||+|.+.......   +.+.+|+.+++.++||||+++++++...        ++|
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            355679999999999999866 8899999987543222   5689999999999999999999987541        899


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA--TLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~--~~h~~i~  155 (156)
                      ||+++|+|.+++...       ..+++..+..++.|++.||.|||+++  ++|+||-
T Consensus       109 Ey~~gg~L~~~l~~~-------~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlK  158 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRF-------KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLK  158 (290)
T ss_dssp             ECCCSCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCC
T ss_pred             eCCCCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccC
Confidence            999999999999763       34889999999999999999999998  9999983

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.92  E-value=4.3e-25  Score=158.02  Aligned_cols=115  Identities=23%  Similarity=0.344  Sum_probs=101.2

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC-ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      .+.+.||+|+||.||+|..+. ++.||+|.+..... ..+.+.+|+.+++.++|+||+++++++.+.    +||||+++|
T Consensus        77 ~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg  156 (346)
T 4fih_A           77 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG  156 (346)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTE
T ss_pred             EEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence            344679999999999999875 89999999975432 336688999999999999999999999877    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++...        .+++..+..++.|++.||.|||+++++|+||-
T Consensus       157 ~L~~~l~~~--------~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlK  197 (346)
T 4fih_A          157 ALTDIVTHT--------RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK  197 (346)
T ss_dssp             EHHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             cHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHCCcccccCC
Confidence            999998743        38899999999999999999999999999983

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.92  E-value=7.1e-25  Score=154.85  Aligned_cols=116  Identities=17%  Similarity=0.171  Sum_probs=103.3

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      +.+.++||+|+||.||++.... ++.||+|++...    ....+.+.+|+.++..++||||+++++.+.+.    ++|||
T Consensus        34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy  113 (311)
T 4aw0_A           34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY  113 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence            5567899999999999999765 899999999742    22336789999999999999999999999887    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||
T Consensus       114 ~~gG~L~~~i~~~-------~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDl  158 (311)
T 4aw0_A          114 AKNGELLKYIRKI-------GSFDETCTRFYTAEIVSALEYLHGKGIIHRDL  158 (311)
T ss_dssp             CTTEEHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             CCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Confidence            9999999999864       34889999999999999999999999999998

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.92  E-value=1.1e-24  Score=159.55  Aligned_cols=115  Identities=23%  Similarity=0.344  Sum_probs=101.8

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC-ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      .+.+.||+|+||.||+|.... +..||+|.+..... ..+.+.+|+.+++.++|+||+++++++...    +||||+++|
T Consensus       154 ~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG  233 (423)
T 4fie_A          154 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG  233 (423)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred             EeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCC
Confidence            345689999999999999876 89999999975433 336789999999999999999999999887    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++...        .+++..+..++.|++.||.|||+++++|+||-
T Consensus       234 ~L~~~i~~~--------~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiK  274 (423)
T 4fie_A          234 ALTDIVTHT--------RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK  274 (423)
T ss_dssp             EHHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             cHHHHHhcc--------CCCHHHHHHHHHHHHHHHHHHHHCCeecccCC
Confidence            999999743        38899999999999999999999999999983

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.91  E-value=4.5e-24  Score=152.28  Aligned_cols=111  Identities=26%  Similarity=0.271  Sum_probs=97.7

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCCh
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSL  108 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L  108 (156)
                      +.+.||+|+||.||++..+. +..||+|.++....    ..+|+.++..++||||+++++++.+.    ++|||+++|+|
T Consensus        62 ~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L  137 (336)
T 4g3f_A           62 HQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL  137 (336)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred             eCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence            34579999999999999866 89999999875322    24699999999999999999999876    99999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .++++..       ..+++..+..++.|++.||.|||+++++|+||-
T Consensus       138 ~~~l~~~-------~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlK  177 (336)
T 4g3f_A          138 GQLIKQM-------GCLPEDRALYYLGQALEGLEYLHTRRILHGDVK  177 (336)
T ss_dssp             HHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCC
T ss_pred             HHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCceecccC
Confidence            9999864       348899999999999999999999999999983

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.91  E-value=1.6e-23  Score=147.79  Aligned_cols=119  Identities=18%  Similarity=0.228  Sum_probs=96.8

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc------------
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG------------   97 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~------------   97 (156)
                      .+.+.||+|+||.||++..+. +..||+|.+.....+.  +.+.+|+.++..++||||+++++.+...            
T Consensus         8 ~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~   87 (299)
T 4g31_A            8 EPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPK   87 (299)
T ss_dssp             EEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------C
T ss_pred             EEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCC
Confidence            445789999999999999765 8999999987543322  5688999999999999999999987521            


Q ss_pred             ----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 ----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 ----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                          ++|||+++|+|.+++.....    ....+...+..++.|++.||.|||+++++|+||-
T Consensus        88 ~~l~ivmE~~~gg~L~~~l~~~~~----~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlK  145 (299)
T 4g31_A           88 VYLYIQMQLCRKENLKDWMNGRCT----IEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLK  145 (299)
T ss_dssp             EEEEEEEECCCSCCHHHHHHTCCS----GGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             cEEEEEEecCCCCcHHHHHHhcCC----CChhHHHHHHHHHHHHHHHHHHHHHCcCccccCc
Confidence                89999999999999986532    1224556788999999999999999999999983

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.90  E-value=4e-24  Score=153.78  Aligned_cols=131  Identities=21%  Similarity=0.335  Sum_probs=105.5

Q ss_pred             HHHHhhhhhhhhccccccCceEEEEEeCC------CcEEEEEecccCCCCh--HHHHHHHHHHcCCCC-CCccccceeee
Q 047548           25 SDVKKMTNSFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGNG--EEFINEVACISGTSH-VNIVTPLGICC   95 (156)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~-~~i~~l~~~~~   95 (156)
                      ++++.....+.+.||+|+||.||+|.+..      ++.||+|.+.......  +.+.+|+.++..+.| +||++++++|.
T Consensus        59 wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~  138 (353)
T 4ase_A           59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT  138 (353)
T ss_dssp             HBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE
Confidence            45666667778899999999999998643      3579999997644332  568999999999955 89999999986


Q ss_pred             cc-----eeeecCCCCChHHHhhhcCCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           96 EG-----LVYEFMSNGSLHKFIYDKGSMS---------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        96 ~~-----lv~e~~~~g~L~~~l~~~~~~~---------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ..     +||||+++|+|.++|+......         .....+++..+..++.|++.||.|||+++++|+|+-
T Consensus       139 ~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK  212 (353)
T 4ase_A          139 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA  212 (353)
T ss_dssp             CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccC
Confidence            53     8999999999999997532100         012347889999999999999999999999999984

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.90  E-value=1.2e-23  Score=146.59  Aligned_cols=116  Identities=12%  Similarity=0.205  Sum_probs=97.4

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      +.+.+.||+|+||.||++.... ++.||+|++.....    ....+.+|+.+++.++||||+++++++.+.    ++|||
T Consensus        15 Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy   94 (275)
T 3hyh_A           15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY   94 (275)
T ss_dssp             CEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeC
Confidence            4566789999999999999765 89999999975321    225689999999999999999999999887    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      + +|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||-
T Consensus        95 ~-~g~L~~~l~~~-------~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiK  139 (275)
T 3hyh_A           95 A-GNELFDYIVQR-------DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLK  139 (275)
T ss_dssp             C-CEEHHHHHHHS-------CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             C-CCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCC
Confidence            8 67999999763       348899999999999999999999999999983

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.90  E-value=5e-24  Score=150.32  Aligned_cols=118  Identities=17%  Similarity=0.150  Sum_probs=96.6

Q ss_pred             hhhhhhccccccCceEEEEEeC----CCcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----ee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLH----EGRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----LV   99 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~----~~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv   99 (156)
                      .+.+.+.||+|+||.||++...    .++.||+|++.....   +...+.+|+.++..++||||+++++++.+.    ++
T Consensus        25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv  104 (304)
T 3ubd_A           25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI  104 (304)
T ss_dssp             GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEE
T ss_pred             ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            4566789999999999999863    267899999975322   224678899999999999999999999877    99


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |||+++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||-
T Consensus       105 mEy~~gg~L~~~l~~~-------~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlK  153 (304)
T 3ubd_A          105 LDFLRGGDLFTRLSKE-------VMFTEEDVKFYLAELALALDHLHSLGIIYRDLK  153 (304)
T ss_dssp             ECCCTTCEEHHHHHHH-------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCC
T ss_pred             EEcCCCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCC
Confidence            9999999999999864       348899999999999999999999999999983

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.90  E-value=2.2e-23  Score=147.38  Aligned_cols=114  Identities=22%  Similarity=0.283  Sum_probs=93.4

Q ss_pred             hhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc--------eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG--------LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~--------lv~e~~~  104 (156)
                      .+.+.||+|+||.||+|.+. +..||+|.+............|+..+..++|+||+++++++...        +||||++
T Consensus         6 ~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~   84 (303)
T 3hmm_A            6 VLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE   84 (303)
T ss_dssp             EEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred             EEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCC
Confidence            35678999999999999885 78999999865422212233455556678999999999998743        8999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc--------CCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV--------ATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~--------~~~h~~i~  155 (156)
                      +|+|.++++..        .+++..+..++.|++.||+|||++        +++|+||-
T Consensus        85 ~gsL~~~l~~~--------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlK  135 (303)
T 3hmm_A           85 HGSLFDYLNRY--------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK  135 (303)
T ss_dssp             TCBHHHHHHHC--------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCC
T ss_pred             CCcHHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCC
Confidence            99999999753        378899999999999999999987        89999984

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.88  E-value=2.7e-22  Score=146.37  Aligned_cols=115  Identities=19%  Similarity=0.316  Sum_probs=98.3

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----------
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----------   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------   97 (156)
                      +.+.+.||+|+||.||+|.... ++.||+|.+.......   +.+.+|+.++..++|+||+++++++...          
T Consensus        56 Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~  135 (398)
T 4b99_A           56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY  135 (398)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEE
T ss_pred             eEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEE
Confidence            3455789999999999999765 8999999997644332   5688999999999999999999876531          


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +||||+. |+|.+++..       ...+++..+..++.|++.||.|||+++++|+||
T Consensus       136 ivmE~~~-g~L~~~i~~-------~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDl  184 (398)
T 4b99_A          136 VVLDLME-SDLHQIIHS-------SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDL  184 (398)
T ss_dssp             EEEECCS-EEHHHHHTS-------SSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             EEEeCCC-CCHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCc
Confidence            9999996 689999975       345899999999999999999999999999998

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.88  E-value=2.2e-22  Score=152.94  Aligned_cols=118  Identities=23%  Similarity=0.320  Sum_probs=103.2

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.+.||+|+||.||+|..+. +..+|+|.+...... .+.+.+|+.++..++||||+++++.+...    ++|||+++
T Consensus       159 Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~g  238 (573)
T 3uto_A          159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG  238 (573)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCC
T ss_pred             cEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCC
Confidence            4566789999999999999876 899999998754322 35688999999999999999999999887    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+|.+++...      ...+++..+..++.|++.||.|||+++++|+||-
T Consensus       239 g~L~~~i~~~------~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlK  282 (573)
T 3uto_A          239 GELFEKVADE------HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLK  282 (573)
T ss_dssp             CBHHHHHTCT------TSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             CcHHHHHHHh------CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCC
Confidence            9999999654      3458899999999999999999999999999983

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.85  E-value=7.9e-21  Score=142.30  Aligned_cols=126  Identities=25%  Similarity=0.421  Sum_probs=109.5

Q ss_pred             HHHHhhhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----ee
Q 047548           25 SDVKKMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LV   99 (156)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv   99 (156)
                      +++......+.+.||+|+||.||++.+.. +..||+|.+.......+.+.+|+.++..++|+|++++++++...    ++
T Consensus       215 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv  294 (495)
T 1opk_A          215 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII  294 (495)
T ss_dssp             CBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             cccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence            44444555667899999999999999876 88999999987655667899999999999999999999998876    99


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++|+|.+++....     ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       295 ~E~~~~g~L~~~l~~~~-----~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlk  345 (495)
T 1opk_A          295 TEFMTYGNLLDYLRECN-----RQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLA  345 (495)
T ss_dssp             EECCTTCBHHHHHHHSC-----TTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEccCCCCHHHHHHhcC-----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            99999999999997642     3447889999999999999999999999999984

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.85  E-value=5.4e-21  Score=141.80  Aligned_cols=125  Identities=18%  Similarity=0.314  Sum_probs=108.1

Q ss_pred             HHHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc---eeeec
Q 047548           26 DVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG---LVYEF  102 (156)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~  102 (156)
                      ++......+.+.||+|+||.||++....+..||+|.+.......+.+.+|+.++..++|+|++++.+++...   +++||
T Consensus       184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~  263 (454)
T 1qcf_A          184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEF  263 (454)
T ss_dssp             BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECC
T ss_pred             eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEee
Confidence            444555566789999999999999988788899999987655667899999999999999999999998765   99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+|.+++....     ...++...+..++.|++.||.|||+++++|+||.
T Consensus       264 ~~~g~L~~~l~~~~-----~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlk  311 (454)
T 1qcf_A          264 MAKGSLLDFLKSDE-----GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLR  311 (454)
T ss_dssp             CTTCBHHHHHHSHH-----HHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCS
T ss_pred             cCCCcHHHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCC
Confidence            99999999997531     2347788999999999999999999999999985

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.85  E-value=2.7e-20  Score=129.07  Aligned_cols=120  Identities=25%  Similarity=0.439  Sum_probs=106.3

Q ss_pred             hhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      ....+.+.||+|+||.||++....+..+|+|.+.......+.+.+|+.++..++|+|++++.+.+...    +++||+++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   89 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH   89 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred             hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCC
Confidence            34456678999999999999987788899999987666667899999999999999999999998876    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++...      ...++...+..++.|++.||.|||+++++|+||.
T Consensus        90 ~~L~~~l~~~------~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dik  133 (269)
T 4hcu_A           90 GCLSDYLRTQ------RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA  133 (269)
T ss_dssp             CBHHHHHHTT------TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             CcHHHHHHhc------CcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcc
Confidence            9999999754      3447889999999999999999999999999985

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.85  E-value=1.2e-20  Score=136.17  Aligned_cols=112  Identities=13%  Similarity=0.243  Sum_probs=96.7

Q ss_pred             hhhhhccccccCceEEEEEeC----CCcEEEEEecccCCCChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLH----EGRVAAVKVLSESMGNGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~----~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      +.+.+.||+|+||.||+|..+    .++.||+|.+.... ....+.+|+.++..+ +|+|++++.+++...    ++|||
T Consensus        23 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~  101 (361)
T 4f9c_A           23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPY  101 (361)
T ss_dssp             CEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEEC
T ss_pred             EEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeC
Confidence            456689999999999999753    26789999886542 345678999999887 799999999998876    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      +++|+|.+++..          +++..+..++.|++.||.|||+++++|+||
T Consensus       102 ~~g~~L~~~~~~----------l~~~~~~~~~~qll~al~ylH~~gIiHRDi  143 (361)
T 4f9c_A          102 LEHESFLDILNS----------LSFQEVREYMLNLFKALKRIHQFGIVHRDV  143 (361)
T ss_dssp             CCCCCHHHHHTT----------CCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             CCcccHHHHHcC----------CCHHHHHHHHHHHHHHHHHHHHCCeEeCcC
Confidence            999999998842          778899999999999999999999999998

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.84  E-value=9.6e-21  Score=144.98  Aligned_cols=114  Identities=17%  Similarity=0.207  Sum_probs=96.2

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHH---HHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFI---NEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~---~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      +.++||+|+||.||++..+. +..+|+|++....    .......   .++.++..++||||+++++.+.+.    +|||
T Consensus       193 i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmE  272 (689)
T 3v5w_A          193 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILD  272 (689)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             EEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEe
Confidence            34789999999999999876 8999999996421    1222233   345677888999999999999887    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                      |++||+|.++|...       ..+++..+..++.||+.||.|||+++++|+||
T Consensus       273 y~~GGdL~~~l~~~-------~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDL  318 (689)
T 3v5w_A          273 LMNGGDLHYHLSQH-------GVFSEADMRFYAAEIILGLEHMHNRFVVYRDL  318 (689)
T ss_dssp             CCCSCBHHHHHHHH-------CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCC
T ss_pred             cCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence            99999999999864       34889999999999999999999999999998

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.84  E-value=1e-20  Score=140.22  Aligned_cols=125  Identities=22%  Similarity=0.359  Sum_probs=107.9

Q ss_pred             HHHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc---eeeec
Q 047548           26 DVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG---LVYEF  102 (156)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~  102 (156)
                      ++......+.+.||+|+||.||++.+..+..||+|.+.......+.+.+|+.++..++|+|++++++++...   +++||
T Consensus       180 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~  259 (452)
T 1fmk_A          180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEY  259 (452)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECC
T ss_pred             ccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehh
Confidence            344445566788999999999999988777899999987655567899999999999999999999988766   99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+|.+++....     ...++...+..++.|++.||.|||+++++|+||.
T Consensus       260 ~~~gsL~~~l~~~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlk  307 (452)
T 1fmk_A          260 MSKGSLLDFLKGET-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR  307 (452)
T ss_dssp             CTTCBHHHHHSHHH-----HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             hcCCCHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence            99999999997531     2347889999999999999999999999999985

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.84  E-value=3e-20  Score=129.62  Aligned_cols=126  Identities=25%  Similarity=0.415  Sum_probs=106.6

Q ss_pred             hHHHHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----ee
Q 047548           24 YSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LV   99 (156)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv   99 (156)
                      .+++......+.+.||+|+||.||.+....+..+|+|.+.......+.+.+|+.++..++|+|++++.+++...    ++
T Consensus        18 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   97 (283)
T 3gen_A           18 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII   97 (283)
T ss_dssp             TTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             CccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence            33444455566789999999999999988888899999987665667899999999999999999999998876    99


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++++|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        98 ~e~~~~~~L~~~l~~~------~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dik  147 (283)
T 3gen_A           98 TEYMANGCLLNYLREM------RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA  147 (283)
T ss_dssp             ECCCTTCBHHHHHHCG------GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCS
T ss_pred             EeccCCCcHHHHHHHh------ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCc
Confidence            9999999999999763      2348899999999999999999999999999985

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.84  E-value=2.4e-20  Score=131.79  Aligned_cols=119  Identities=18%  Similarity=0.347  Sum_probs=103.1

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      ...+.+.||+|+||.||++.... +..+|+|.+...... .+.+.+|+.++..++|+|++++++++...    +++||++
T Consensus        11 ~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~   90 (310)
T 3s95_A           11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIK   90 (310)
T ss_dssp             GEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             HeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecC
Confidence            34556789999999999999865 889999987654322 25789999999999999999999998876    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        91 ~~~L~~~l~~~------~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlk  135 (310)
T 3s95_A           91 GGTLRGIIKSM------DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLN  135 (310)
T ss_dssp             TCBHHHHHHHC------CTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             CCcHHHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCC
Confidence            99999999864      3448899999999999999999999999999985

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.83  E-value=1.1e-20  Score=142.68  Aligned_cols=126  Identities=21%  Similarity=0.348  Sum_probs=108.5

Q ss_pred             HHHHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc---eeee
Q 047548           25 SDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG---LVYE  101 (156)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e  101 (156)
                      +++......+.+.||+|+||.||++.+..+..||+|.+.......+.+.+|+.++..++|+|++++++++...   +++|
T Consensus       262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e  341 (535)
T 2h8h_A          262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTE  341 (535)
T ss_dssp             SBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEC
T ss_pred             eecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeee
Confidence            3444455566788999999999999988777899999987655567899999999999999999999988766   9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++|+|.+++....     ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       342 ~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlk  390 (535)
T 2h8h_A          342 YMSKGSLLDFLKGET-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR  390 (535)
T ss_dssp             CCTTEEHHHHHSHHH-----HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             hhcCCcHHHHHhhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence            999999999997531     2347889999999999999999999999999985

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.83  E-value=4.4e-20  Score=129.01  Aligned_cols=129  Identities=25%  Similarity=0.428  Sum_probs=110.7

Q ss_pred             CChHHHHhhhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc---
Q 047548           22 YNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG---   97 (156)
Q Consensus        22 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---   97 (156)
                      +..+++......+.+.||+|+||.||++.... +..+|+|.+.......+.+.+|+.++..++|+|++++.+.+...   
T Consensus         5 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   84 (288)
T 3kfa_A            5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF   84 (288)
T ss_dssp             CCTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred             hhcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence            34445555566677899999999999999876 88999999886555557899999999999999999999998776   


Q ss_pred             -eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 -LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 -lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       +++||+++++|.+++....     ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        85 ~~v~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dik  138 (288)
T 3kfa_A           85 YIITEFMTYGNLLDYLRECN-----RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA  138 (288)
T ss_dssp             EEEEECCTTEEHHHHHHHCC-----TTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCS
T ss_pred             EEEEEcCCCCcHHHHHHhcc-----cCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCC
Confidence             9999999999999997643     3458889999999999999999999999999985

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.83  E-value=1.8e-20  Score=135.96  Aligned_cols=121  Identities=26%  Similarity=0.473  Sum_probs=103.5

Q ss_pred             hhhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           29 KMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        29 ~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      .....+.+.||+|+||.||++.... +..||+|.+.......  ..+.+|+.++..++|+|++++++.+...    +++|
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  192 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME  192 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence            3344556789999999999999874 8899999987543222  4688999999999999999999998775    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++|+|.+++...      ...++...+..++.|++.||.|||+++++|+||.
T Consensus       193 ~~~~g~L~~~l~~~------~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlk  240 (377)
T 3cbl_A          193 LVQGGDFLTFLRTE------GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLA  240 (377)
T ss_dssp             CCTTCBHHHHHHHH------GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             cCCCCCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccC
Confidence            99999999999764      3347889999999999999999999999999985

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.83  E-value=2.7e-20  Score=128.93  Aligned_cols=120  Identities=26%  Similarity=0.400  Sum_probs=106.4

Q ss_pred             hhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      ....+.+.||+|+||.||++....+..+|+|.+.......+.+.+|+.++..++|+|++++.+.+...    +++||+++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   87 (268)
T 3sxs_A            8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISN   87 (268)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred             hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCC
Confidence            34456678999999999999988788899999987665667899999999999999999999998776    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++...      ...+++..+..++.|++.||.|||+.+++|+||.
T Consensus        88 ~~L~~~l~~~------~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dik  131 (268)
T 3sxs_A           88 GCLLNYLRSH------GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLA  131 (268)
T ss_dssp             CBHHHHHHHH------GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCS
T ss_pred             CcHHHHHHHc------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcC
Confidence            9999999764      3448899999999999999999999999999985

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.83  E-value=4.8e-20  Score=133.66  Aligned_cols=119  Identities=24%  Similarity=0.429  Sum_probs=101.4

Q ss_pred             hhhhhhccccccCceEEEEEeC----CCcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----eee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLH----EGRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LVY  100 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~----~~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~  100 (156)
                      ...+.+.||+|+||.||++...    .+..||+|.+.......  +.+.+|+.++..++|+|++++.+++...    +++
T Consensus        46 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  125 (373)
T 2qol_A           46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT  125 (373)
T ss_dssp             GCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             hceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEE
Confidence            3455678999999999999865    36789999987643222  5689999999999999999999998876    999


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++++|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       126 e~~~~~sL~~~l~~~------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  174 (373)
T 2qol_A          126 EYMENGSLDSFLRKH------DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA  174 (373)
T ss_dssp             ECCTTCBHHHHHHTT------TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             eCCCCCcHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCC
Confidence            999999999999764      3458889999999999999999999999999985

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.83  E-value=5.6e-20  Score=128.91  Aligned_cols=127  Identities=9%  Similarity=-0.050  Sum_probs=105.3

Q ss_pred             CCCChHH-HHhhhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh----HHHHHHHHHHcCCCCCCcccccee
Q 047548           20 KGYNYSD-VKKMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG----EEFINEVACISGTSHVNIVTPLGI   93 (156)
Q Consensus        20 ~~~~~~~-~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~----~~~~~e~~~l~~l~~~~i~~l~~~   93 (156)
                      ..+..++ +....+.+.+.||+|+||.||++.... +..||+|.+.......    +.+.+|+..+..+.|+|+++++++
T Consensus        20 ~~~~~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~   99 (286)
T 3uqc_A           20 VQLVPGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDV   99 (286)
T ss_dssp             CCCCTTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             CcCCCCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEE
Confidence            3444454 444556677899999999999999866 8899999998654332    568899999999999999999999


Q ss_pred             eecc----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           94 CCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        94 ~~~~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +...    ++|||+++++|.+++...         ........++.|++.||.|||+++++|+||.
T Consensus       100 ~~~~~~~~lv~e~~~g~~L~~~l~~~---------~~~~~~~~i~~ql~~aL~~lH~~givH~Dik  156 (286)
T 3uqc_A          100 VHTRAGGLVVAEWIRGGSLQEVADTS---------PSPVGAIRAMQSLAAAADAAHRAGVALSIDH  156 (286)
T ss_dssp             EEETTEEEEEEECCCEEEHHHHHTTC---------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred             EEECCcEEEEEEecCCCCHHHHHhcC---------CChHHHHHHHHHHHHHHHHHHHCCCccCCCC
Confidence            8776    999999999999998532         3455678899999999999999999999984

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.83  E-value=4.8e-20  Score=131.16  Aligned_cols=118  Identities=16%  Similarity=0.157  Sum_probs=102.9

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      +.+.+.||+|+||.||++.... +..+|+|.+.........+.+|+.++..++|+|++++.+.+...    +++||++++
T Consensus         7 y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~   86 (321)
T 1tki_A            7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGL   86 (321)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCC
T ss_pred             eEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCC
Confidence            3456789999999999999765 88999999876544446788999999999999999999998776    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        87 ~L~~~l~~~------~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlk  129 (321)
T 1tki_A           87 DIFERINTS------AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIR  129 (321)
T ss_dssp             BHHHHHTSS------SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             CHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCC
Confidence            999999754      3358899999999999999999999999999984

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.83  E-value=7.3e-20  Score=132.16  Aligned_cols=118  Identities=17%  Similarity=0.188  Sum_probs=104.6

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      .+.+.+.||+|+||.||++.... +..||+|.+.......+.+.+|+.+++.++|+|++++.+++...    +++||+++
T Consensus        21 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~  100 (361)
T 3uc3_A           21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASG  100 (361)
T ss_dssp             TEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCC
Confidence            34566899999999999999865 88999999987655557789999999999999999999998876    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+|.+++...       ..++...+..++.|++.||.|||+++++|+||.
T Consensus       101 ~~L~~~l~~~-------~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlk  143 (361)
T 3uc3_A          101 GELYERICNA-------GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLK  143 (361)
T ss_dssp             CBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCC
T ss_pred             CCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            9999999763       338899999999999999999999999999984

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.83  E-value=4.6e-20  Score=133.42  Aligned_cols=127  Identities=24%  Similarity=0.368  Sum_probs=104.1

Q ss_pred             hhhhhhhhccccccCceEEEEEeC------CCcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc---
Q 047548           29 KMTNSFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG---   97 (156)
Q Consensus        29 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~---   97 (156)
                      .....+.+.||+|+||.||++.+.      .+..||+|.+.......  ..+.+|+.++..++|+|++++++.+...   
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            334455678999999999999853      25689999987543222  4688999999999999999999998776   


Q ss_pred             -eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 -LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 -lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       +++||+++|+|.+++............+++..++.++.|++.||.|||+++++|+||.
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk  208 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIA  208 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence             9999999999999998754222223458889999999999999999999999999985

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.82  E-value=1.2e-19  Score=125.51  Aligned_cols=119  Identities=25%  Similarity=0.427  Sum_probs=105.4

Q ss_pred             hhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      ...+.+.||+|+||.||.+....+..+++|.+.......+.+.+|+.++..++|+|++++.+.+...    +++||++++
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   88 (267)
T 3t9t_A            9 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHG   88 (267)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTC
T ss_pred             heeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCC
Confidence            4455678999999999999987788899999987665667899999999999999999999998776    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++...      ...++...+..++.|++.||.|||+++++|+||.
T Consensus        89 ~L~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~  131 (267)
T 3t9t_A           89 CLSDYLRTQ------RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA  131 (267)
T ss_dssp             BHHHHHHHT------TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCC
T ss_pred             cHHHHHhhC------cccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCc
Confidence            999999764      3347889999999999999999999999999985

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.82  E-value=7.9e-20  Score=130.18  Aligned_cols=120  Identities=23%  Similarity=0.400  Sum_probs=102.0

Q ss_pred             hhhhhhhccccccCceEEEEEeCC----CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----ee
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LV   99 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv   99 (156)
                      ....+.+.||+|+||.||++....    +..||+|.+.......  +.+.+|+.++..++|+|++++.+++...    ++
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  128 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV  128 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence            334556789999999999999753    4469999987643222  5689999999999999999999998876    99


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++++|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       129 ~e~~~~~~L~~~l~~~------~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlk  178 (325)
T 3kul_A          129 TEYMENGSLDTFLRTH------DGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLA  178 (325)
T ss_dssp             EECCTTCBHHHHHHTT------TTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             eeCCCCCcHHHHHHhc------ccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCC
Confidence            9999999999999754      3458899999999999999999999999999985

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.82  E-value=1.5e-19  Score=130.56  Aligned_cols=118  Identities=19%  Similarity=0.294  Sum_probs=102.8

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC-------ChHHHHHHHHHHcCCCCCCccccceeeecc----e
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-------NGEEFINEVACISGTSHVNIVTPLGICCEG----L   98 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----l   98 (156)
                      .+.+.+.||+|+||.||++.... +..+|+|.+.....       ..+.+.+|+.++..+.|+|++++.+.+...    +
T Consensus        13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l   92 (361)
T 2yab_A           13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL   92 (361)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence            34567899999999999999865 88999999875322       235688999999999999999999998876    9


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++||+++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        93 v~e~~~gg~L~~~l~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlk  142 (361)
T 2yab_A           93 ILELVSGGELFDFLAQK-------ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLK  142 (361)
T ss_dssp             EEECCCSCBHHHHHTTC-------SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             EEEcCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            99999999999999753       348899999999999999999999999999984

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.82  E-value=3.4e-20  Score=129.11  Aligned_cols=125  Identities=20%  Similarity=0.347  Sum_probs=107.5

Q ss_pred             HHHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc---eeeec
Q 047548           26 DVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG---LVYEF  102 (156)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~  102 (156)
                      ++......+.+.||+|+||.||++...++..+|+|.+.......+.+.+|+.++..++|+|++++.+.+...   +++||
T Consensus         9 ~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~   88 (279)
T 1qpc_A            9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEY   88 (279)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred             ccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEec
Confidence            344455567789999999999999987788899999987655667899999999999999999999988766   99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++....     ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        89 ~~~~~L~~~l~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dik  136 (279)
T 1qpc_A           89 MENGSLVDFLKTPS-----GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR  136 (279)
T ss_dssp             CTTCBHHHHTTSHH-----HHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             CCCCCHHHHHhcCC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence            99999999997431     2247889999999999999999999999999985

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.82  E-value=1.2e-19  Score=128.88  Aligned_cols=134  Identities=30%  Similarity=0.547  Sum_probs=111.0

Q ss_pred             CCCCChHHHHhhhhhh--hhccccccCceEEEEEeCCCcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceee
Q 047548           19 PKGYNYSDVKKMTNSF--SDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGIC   94 (156)
Q Consensus        19 ~~~~~~~~~~~~~~~~--~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~   94 (156)
                      ...++..++.....+|  .+.||+|+||.||++...++..||+|.+......  ...+.+|+.++..+.|+|++++.+++
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   96 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC   96 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence            4567777777666655  4789999999999998777889999998764322  24688999999999999999999998


Q ss_pred             ecc----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc---CCCCcccc
Q 047548           95 CEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV---ATLGLCIS  155 (156)
Q Consensus        95 ~~~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~---~~~h~~i~  155 (156)
                      ...    +++||+++|+|.+++......   ...+++..+..++.|++.||.|||++   +++|+||.
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlk  161 (326)
T 3uim_A           97 MTPTERLLVYPYMANGSVASCLRERPES---QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVK  161 (326)
T ss_dssp             CCSSCCEEEEECCTTCBHHHHHHCCSTT---CCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCS
T ss_pred             ecCCceEEEEEeccCCCHHHHHHhcccc---CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCc
Confidence            776    999999999999999764321   34588899999999999999999999   99999985

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.82  E-value=1e-19  Score=129.89  Aligned_cols=117  Identities=15%  Similarity=0.242  Sum_probs=101.6

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      +.+.+.||+|+||.||++.... +..||+|.+.......   +.+.+|+.++..++|+|++++.+++...    +++||+
T Consensus        17 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~   96 (328)
T 3fe3_A           17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA   96 (328)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECC
Confidence            3456789999999999999754 8999999987643332   5688999999999999999999998776    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        97 ~~~~L~~~l~~~-------~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlk  141 (328)
T 3fe3_A           97 SGGEVFDYLVAH-------GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLK  141 (328)
T ss_dssp             TTCBHHHHHHHH-------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             CCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCC
Confidence            999999999764       337889999999999999999999999999984

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.82  E-value=6.6e-20  Score=128.65  Aligned_cols=122  Identities=24%  Similarity=0.434  Sum_probs=102.4

Q ss_pred             HhhhhhhhhccccccCceEEEEEeC-----CCcEEEEEecccCCCCh-HHHHHHHHHHcCCCCCCccccceeeecc----
Q 047548           28 KKMTNSFSDKVRQGGYGVVYRGKLH-----EGRVAAVKVLSESMGNG-EEFINEVACISGTSHVNIVTPLGICCEG----   97 (156)
Q Consensus        28 ~~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~a~k~~~~~~~~~-~~~~~e~~~l~~l~~~~i~~l~~~~~~~----   97 (156)
                      ......+.+.||+|+||.||++.+.     .+..||+|.+....... +.+.+|+.++..++|+|++++.+++...    
T Consensus         8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   87 (295)
T 3ugc_A            8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN   87 (295)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred             CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence            3344556789999999999999852     37899999987543322 5788999999999999999999987543    


Q ss_pred             --eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 --LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 --lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                        +++||+++++|.+++...      ...+++..+..++.|++.||.|||+.+++|+||.
T Consensus        88 ~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dik  141 (295)
T 3ugc_A           88 LKLIMEYLPYGSLRDYLQKH------KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA  141 (295)
T ss_dssp             CEEEEECCTTCBHHHHHHHC------GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             eEEEEEeCCCCCHHHHHHhc------ccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Confidence              899999999999999764      2347889999999999999999999999999985

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.82  E-value=3.2e-19  Score=126.86  Aligned_cols=129  Identities=22%  Similarity=0.282  Sum_probs=106.8

Q ss_pred             CCCCChHHHHhhhhh------------hhhccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCCC
Q 047548           19 PKGYNYSDVKKMTNS------------FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTSH   84 (156)
Q Consensus        19 ~~~~~~~~~~~~~~~------------~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~   84 (156)
                      ...++..++......            ..+.||+|+||.||++.... +..||+|.+...... .+.+.+|+.++..++|
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h  101 (321)
T 2c30_A           22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH  101 (321)
T ss_dssp             ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred             CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence            345677777665532            23579999999999999864 899999998764433 3678899999999999


Q ss_pred             CCccccceeeecc----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           85 VNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        85 ~~i~~l~~~~~~~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|++++.+.+...    +++||+++++|.+++..        ..+++..+..++.|++.||.|||+.+++|+||.
T Consensus       102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--------~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlk  168 (321)
T 2c30_A          102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--------VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIK  168 (321)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT--------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh--------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            9999999988776    99999999999999864        237899999999999999999999999999984

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.82  E-value=8.6e-20  Score=127.59  Aligned_cols=122  Identities=24%  Similarity=0.388  Sum_probs=102.9

Q ss_pred             HhhhhhhhhccccccCceEEEEEeCC-C-------cEEEEEecccCCC-ChHHHHHHHHHHcCCCCCCccccceeeecc-
Q 047548           28 KKMTNSFSDKVRQGGYGVVYRGKLHE-G-------RVAAVKVLSESMG-NGEEFINEVACISGTSHVNIVTPLGICCEG-   97 (156)
Q Consensus        28 ~~~~~~~~~~lg~g~~g~v~~~~~~~-~-------~~~a~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~-   97 (156)
                      ......+.+.||+|+||.||++.... +       ..+++|.+..... ..+.+.+|+.++..++|+|++++++++... 
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   85 (289)
T 4fvq_A            6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD   85 (289)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred             chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence            33445567899999999999998654 3       4689999865433 336789999999999999999999998876 


Q ss_pred             ---eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 ---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 ---lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                         +++||+++++|.+++...      ...++...+..++.|++.||.|||+++++|+||.
T Consensus        86 ~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlk  140 (289)
T 4fvq_A           86 ENILVQEFVKFGSLDTYLKKN------KNCINILWKLEVAKQLAAAMHFLEENTLIHGNVC  140 (289)
T ss_dssp             CCEEEEECCTTCBHHHHHHHT------GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             CCEEEEECCCCCCHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcC
Confidence               999999999999999764      3347889999999999999999999999999985

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.82  E-value=2.6e-19  Score=127.08  Aligned_cols=120  Identities=31%  Similarity=0.553  Sum_probs=102.7

Q ss_pred             hhhhccccccCceEEEEEeCCCcEEEEEecccCCCCh-HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG-EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGS  107 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~-~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~  107 (156)
                      .+.+.||+|+||.||++...++..||+|.+....... +.+.+|+.++..++|+|++++.+.+...    +++||+++++
T Consensus        42 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~  121 (321)
T 2qkw_B           42 DHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGN  121 (321)
T ss_dssp             SCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCB
T ss_pred             CccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCc
Confidence            3446899999999999998778999999887654333 6789999999999999999999998776    9999999999


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |.+++......   ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       122 L~~~l~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlk  166 (321)
T 2qkw_B          122 LKRHLYGSDLP---TMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVK  166 (321)
T ss_dssp             TGGGSSSSCCC---SCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             HHHHHhccCCC---ccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCC
Confidence            99998754211   3357889999999999999999999999999985

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.81  E-value=2.5e-19  Score=129.41  Aligned_cols=119  Identities=16%  Similarity=0.187  Sum_probs=103.1

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ..+.+.+.||+|+||.||++.... +..+|+|.+.......   +.+.+|+.++..++|+|++++++.+...    +++|
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e  108 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD  108 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            345567889999999999999765 8899999997643322   5688999999999999999999998876    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++|+|.+.+...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       109 ~~~gg~L~~~l~~~-------~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlk  155 (362)
T 2bdw_A          109 LVTGGELFEDIVAR-------EFYSEADASHCIQQILESIAYCHSNGIVHRNLK  155 (362)
T ss_dssp             CCCSCBHHHHHTTC-------SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCS
T ss_pred             cCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCc
Confidence            99999999998753       347899999999999999999999999999984

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.81  E-value=1.3e-19  Score=134.28  Aligned_cols=117  Identities=24%  Similarity=0.415  Sum_probs=101.2

Q ss_pred             hhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc-----eeeecCCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG-----LVYEFMSNG  106 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----lv~e~~~~g  106 (156)
                      ..+.+.||+|+||.||++... +..||+|.++... ..+.+.+|+.++..++|+|++++++.+...     +++||+++|
T Consensus       195 ~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g  272 (450)
T 1k9a_A          195 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG  272 (450)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTC
T ss_pred             eEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCC
Confidence            345578999999999999876 6789999987643 457899999999999999999999987653     999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++....     ...++...+..++.|++.||.|||+++++|+||.
T Consensus       273 ~L~~~l~~~~-----~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlk  316 (450)
T 1k9a_A          273 SLVDYLRSRG-----RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLA  316 (450)
T ss_dssp             BHHHHHHHHC-----TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             cHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence            9999998653     3346889999999999999999999999999985

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.81  E-value=2.9e-19  Score=124.88  Aligned_cols=120  Identities=27%  Similarity=0.473  Sum_probs=102.8

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh--------HHHHHHHHHHcCCCCCCccccceeeecc--e
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG--------EEFINEVACISGTSHVNIVTPLGICCEG--L   98 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~--------~~~~~e~~~l~~l~~~~i~~l~~~~~~~--l   98 (156)
                      ....+.+.||+|+||.||++.... +..+|+|.+.......        +.+.+|+.++..++|+|++++++.+...  +
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~l   98 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM   98 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTTEE
T ss_pred             ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCCeE
Confidence            344566789999999999999864 8899999986532211        5688999999999999999999998777  9


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA--TLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~--~~h~~i~  155 (156)
                      ++||+++++|.+++...      ...+++..+..++.|++.||.|||+++  ++|+||.
T Consensus        99 v~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dik  151 (287)
T 4f0f_A           99 VMEFVPCGDLYHRLLDK------AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLR  151 (287)
T ss_dssp             EEECCTTCBHHHHHHCT------TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCS
T ss_pred             EEEecCCCCHHHHHhcc------cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCC
Confidence            99999999999988754      345889999999999999999999999  9999985

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.81  E-value=1.9e-19  Score=124.53  Aligned_cols=120  Identities=23%  Similarity=0.341  Sum_probs=102.4

Q ss_pred             hhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc------eee
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG------LVY  100 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv~  100 (156)
                      ....+.+.||+|+||.||++... +..+|+|.+.......   +.+.+|+.++..++|+|++++.+++...      +++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            34456678999999999999985 7789999987644332   5688999999999999999999998764      999


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA--TLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~--~~h~~i~  155 (156)
                      ||+++++|.+++....     ...+++..+..++.|++.||.|||+++  ++|+||.
T Consensus        89 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dik  140 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEGT-----NFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALN  140 (271)
T ss_dssp             ECCTTCBHHHHHHSCS-----SCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCS
T ss_pred             cccCCCcHHHHHhhcc-----cCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCc
Confidence            9999999999997642     335889999999999999999999999  9999985

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.81  E-value=3.6e-19  Score=126.85  Aligned_cols=118  Identities=19%  Similarity=0.298  Sum_probs=102.5

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC-------ChHHHHHHHHHHcCCCCCCccccceeeecc----e
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-------NGEEFINEVACISGTSHVNIVTPLGICCEG----L   98 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----l   98 (156)
                      .+.+.+.||+|+||.||++.... +..+|+|.+.....       ..+.+.+|+.++..++|+|++++.+.+...    +
T Consensus        12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   91 (326)
T 2y0a_A           12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL   91 (326)
T ss_dssp             HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            44566889999999999999865 88999999875321       235688999999999999999999998876    9


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++||+++++|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        92 v~e~~~~~~L~~~l~~~-------~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlk  141 (326)
T 2y0a_A           92 ILELVAGGELFDFLAEK-------ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLK  141 (326)
T ss_dssp             EEECCCSCBHHHHHTTS-------SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             EEEcCCCCCHHHHHHhc-------CCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCC
Confidence            99999999999999653       348899999999999999999999999999984

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.81  E-value=2.7e-19  Score=125.95  Aligned_cols=116  Identities=22%  Similarity=0.312  Sum_probs=100.8

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC-ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.+.||+|+||.||++.... +..||+|.+..... ..+.+.+|+.++..++|+|++++++.+...    +++||+++
T Consensus        22 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~  101 (297)
T 3fxz_A           22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG  101 (297)
T ss_dssp             BCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             eeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCC
Confidence            4456789999999999998654 88999999865433 346788999999999999999999988776    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++...        .++...+..++.|++.||.|||+++++|+||.
T Consensus       102 ~~L~~~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlk  143 (297)
T 3fxz_A          102 GSLTDVVTET--------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIK  143 (297)
T ss_dssp             CBHHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CCHHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCC
Confidence            9999999753        37889999999999999999999999999985

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.81  E-value=2.4e-19  Score=127.15  Aligned_cols=120  Identities=24%  Similarity=0.294  Sum_probs=102.2

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCC--CChHHHHHHHHHHcCCCCCCccccceeeecc------eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM--GNGEEFINEVACISGTSHVNIVTPLGICCEG------LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv~e~  102 (156)
                      +.+.+.||+|+||.||++.... +..||+|++....  ...+.+.+|+.++..++|+|++++++++...      +++||
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~   90 (319)
T 4euu_A           11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF   90 (319)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred             EEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeC
Confidence            3456789999999999999876 8899999987533  2336688999999999999999999987653      89999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++.....    ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        91 ~~~~~L~~~l~~~~~----~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlk  139 (319)
T 4euu_A           91 CPCGSLYTVLEEPSN----AYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIK  139 (319)
T ss_dssp             CTTCBHHHHHHSGGG----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             CCCCCHHHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCC
Confidence            999999999976421    2338899999999999999999999999999985

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.81  E-value=4.9e-19  Score=124.40  Aligned_cols=118  Identities=23%  Similarity=0.254  Sum_probs=101.8

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh----HHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG----EEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~----~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      .+.+.+.||+|+||.||++.... +..+|+|.+.......    +.+.+|+.++..++|+|++++++.+...    +++|
T Consensus        12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   91 (294)
T 4eqm_A           12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVME   91 (294)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEE
T ss_pred             cEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEe
Confidence            34566789999999999998765 8899999986533222    5688999999999999999999998876    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++++|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        92 ~~~g~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlk  138 (294)
T 4eqm_A           92 YIEGPTLSEYIESH-------GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIK  138 (294)
T ss_dssp             CCCSCBHHHHHHHH-------CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            99999999999764       347899999999999999999999999999985

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.81  E-value=3.9e-19  Score=127.32  Aligned_cols=116  Identities=16%  Similarity=0.158  Sum_probs=101.1

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.+.||+|+||.||++.... +..+|+|++...    ......+.+|..++..++|+|++++.+.+...    ++|||+
T Consensus         8 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~   87 (337)
T 1o6l_A            8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYA   87 (337)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCC
Confidence            455789999999999999865 889999998752    22336788999999999999999999998876    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        88 ~gg~L~~~l~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlk  132 (337)
T 1o6l_A           88 NGGELFFHLSRE-------RVFTEERARFYGAEIVSALEYLHSRDVVYRDIK  132 (337)
T ss_dssp             TTCBHHHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCC
T ss_pred             CCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCC
Confidence            999999999763       347889999999999999999999999999984

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.81  E-value=1.5e-19  Score=128.00  Aligned_cols=122  Identities=28%  Similarity=0.416  Sum_probs=102.2

Q ss_pred             hhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           29 KMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        29 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      .....+.+.||+|+||.||++... +..+|+|.+.......   +.+.+|+.++..++|+|++++.+.+...    +++|
T Consensus        36 ~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  114 (309)
T 3p86_A           36 WCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE  114 (309)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred             hhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence            334455678999999999999874 7789999987644333   4688999999999999999999998876    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA--TLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~--~~h~~i~  155 (156)
                      |+++++|.+++.....    ...+++..+..++.|++.||.|||+++  ++|+||.
T Consensus       115 ~~~~~~L~~~l~~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dik  166 (309)
T 3p86_A          115 YLSRGSLYRLLHKSGA----REQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLK  166 (309)
T ss_dssp             CCTTCBHHHHHHSTTH----HHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCC
T ss_pred             cCCCCcHHHHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCC
Confidence            9999999999975321    123788999999999999999999999  9999985

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.80  E-value=3.4e-19  Score=129.61  Aligned_cols=120  Identities=16%  Similarity=0.185  Sum_probs=103.6

Q ss_pred             hhhhhhccccc--cCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eee
Q 047548           31 TNSFSDKVRQG--GYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVY  100 (156)
Q Consensus        31 ~~~~~~~lg~g--~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~  100 (156)
                      .+.+.+.||+|  +||.||++.... +..||+|.+.......   +.+.+|+.+++.++|+||+++.+++...    +++
T Consensus        26 ~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  105 (389)
T 3gni_B           26 CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT  105 (389)
T ss_dssp             GEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEE
Confidence            34566899999  999999999875 8999999997643222   4678899999999999999999998876    999


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++++|.+++....     ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       106 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlk  155 (389)
T 3gni_B          106 SFMAYGSAKDLICTHF-----MDGMNELAIAYILQGVLKALDYIHHMGYVHRSVK  155 (389)
T ss_dssp             ECCTTCBHHHHHHHTC-----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             EccCCCCHHHHHhhhc-----ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            9999999999997642     3458899999999999999999999999999984

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.80  E-value=3.3e-19  Score=129.88  Aligned_cols=118  Identities=19%  Similarity=0.302  Sum_probs=102.2

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC-ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      ..+.+.||+|+||.||++.... +..+|+|.+..... +...+.+|+.++..++|+|++++.+.+...    +++||+++
T Consensus        53 y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~g  132 (387)
T 1kob_A           53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSG  132 (387)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCC
T ss_pred             eEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCC
Confidence            4556789999999999999765 88999999875432 225688999999999999999999998876    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       133 g~L~~~l~~~------~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlk  176 (387)
T 1kob_A          133 GELFDRIAAE------DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIK  176 (387)
T ss_dssp             CBHHHHTTCT------TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             CcHHHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccc
Confidence            9999998753      3358899999999999999999999999999984

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.80  E-value=4.3e-19  Score=124.74  Aligned_cols=129  Identities=22%  Similarity=0.360  Sum_probs=105.0

Q ss_pred             CCChHHHHhhhhhhhhccccccCceEEEEEe-----CCCcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCcccccee
Q 047548           21 GYNYSDVKKMTNSFSDKVRQGGYGVVYRGKL-----HEGRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGI   93 (156)
Q Consensus        21 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~-----~~~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~   93 (156)
                      .+....+......+.+.||+|+||.||.+.+     ..+..+|+|.+.....  ..+.+.+|+.++..++|+|++++.+.
T Consensus        12 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   91 (302)
T 4e5w_A           12 EVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGI   91 (302)
T ss_dssp             CCCTTBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ecChhhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeE
Confidence            4444555555556678999999999999984     2378999999875432  23678999999999999999999998


Q ss_pred             eecc------eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           94 CCEG------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        94 ~~~~------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +...      +++||+++++|.+++...      ...++...+..++.|++.||.|||+++++|+||.
T Consensus        92 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dik  153 (302)
T 4e5w_A           92 CTEDGGNGIKLIMEFLPSGSLKEYLPKN------KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLA  153 (302)
T ss_dssp             EEC---CCEEEEEECCTTCBHHHHHHHH------TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EecCCCceEEEEEEeCCCCcHHHHHHhc------cccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCc
Confidence            8754      899999999999999654      3448899999999999999999999999999985

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.80  E-value=6e-19  Score=125.27  Aligned_cols=120  Identities=18%  Similarity=0.214  Sum_probs=98.3

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeec------------
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCE------------   96 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~------------   96 (156)
                      ..+.+.||+|+||.||++.... +..||+|.+......  .+.+.+|+.++..++|+|++++++.+..            
T Consensus         8 y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~   87 (332)
T 3qd2_B            8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDE   87 (332)
T ss_dssp             EEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC
T ss_pred             CceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhh
Confidence            3455789999999999999874 889999998754322  3678999999999999999999887521            


Q ss_pred             ------------------------------------------------c-eeeecCCCCChHHHhhhcCCCCCCCCCCCH
Q 047548           97 ------------------------------------------------G-LVYEFMSNGSLHKFIYDKGSMSTKNNRLEW  127 (156)
Q Consensus        97 ------------------------------------------------~-lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~  127 (156)
                                                                      . +++||+++++|.+++.....    ....++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~  163 (332)
T 3qd2_B           88 IWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS----LEDREH  163 (332)
T ss_dssp             --------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS----GGGSCH
T ss_pred             hhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC----ccchhh
Confidence                                                            1 89999999999999986532    233456


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          128 TTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       128 ~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ..+..++.|++.||.|||+++++|+||.
T Consensus       164 ~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  191 (332)
T 3qd2_B          164 GVCLHIFIQIAEAVEFLHSKGLMHRDLK  191 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeecCCC
Confidence            6789999999999999999999999984

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.80  E-value=3.3e-19  Score=129.11  Aligned_cols=125  Identities=20%  Similarity=0.400  Sum_probs=101.4

Q ss_pred             hhhhhhccccccCceEEEEEeC--------CCcEEEEEecccCCCCh--HHHHHHHHHHcCC-CCCCccccceeeecc--
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLH--------EGRVAAVKVLSESMGNG--EEFINEVACISGT-SHVNIVTPLGICCEG--   97 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~--------~~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l-~~~~i~~l~~~~~~~--   97 (156)
                      ...+.+.||+|+||.||++...        .+..||+|.+.......  +.+.+|+.++..+ +|+|++++++.+...  
T Consensus        82 ~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~  161 (370)
T 2psq_A           82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP  161 (370)
T ss_dssp             GEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSS
T ss_pred             HCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCC
Confidence            3445678999999999999853        24579999997643222  5689999999999 899999999998776  


Q ss_pred             --eeeecCCCCChHHHhhhcCCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 --LVYEFMSNGSLHKFIYDKGSMS---------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 --lv~e~~~~g~L~~~l~~~~~~~---------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                        +++||+++|+|.+++.......         .....++...+..++.|++.||.|||+++++|+||.
T Consensus       162 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk  230 (370)
T 2psq_A          162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA  230 (370)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             EEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence              9999999999999998643210         012347888999999999999999999999999984

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.80  E-value=3e-19  Score=129.46  Aligned_cols=114  Identities=20%  Similarity=0.281  Sum_probs=94.7

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCC-ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCChH
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLH  109 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L~  109 (156)
                      +.||+|+||.||++.... +..+|+|++..... ..+.+.+|+.++..++|+|++++.+++...    +++||+++++|.
T Consensus        95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~  174 (373)
T 2x4f_A           95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF  174 (373)
T ss_dssp             EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEH
T ss_pred             eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHH
Confidence            469999999999998765 88999999876432 236789999999999999999999998876    999999999999


Q ss_pred             HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          110 KFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       110 ~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++...      ...+++..+..++.|++.||.|||+.+++|+||.
T Consensus       175 ~~l~~~------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  214 (373)
T 2x4f_A          175 DRIIDE------SYNLTELDTILFMKQICEGIRHMHQMYILHLDLK  214 (373)
T ss_dssp             HHHHHT------GGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             HHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCC
Confidence            988754      3347889999999999999999999999999984

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.80  E-value=2.2e-19  Score=129.19  Aligned_cols=124  Identities=19%  Similarity=0.185  Sum_probs=103.2

Q ss_pred             hhhhhhhhccccccCceEEEEEeCC-CcEEEEEecccC------CCChHHHHHHHHHHcCCCCCCccccceeeecc----
Q 047548           29 KMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES------MGNGEEFINEVACISGTSHVNIVTPLGICCEG----   97 (156)
Q Consensus        29 ~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----   97 (156)
                      ...+.+.+.||+|+||.||++.... +..+|+|++...      ....+.+.+|+.++..++|+||+++++.+...    
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            3445667899999999999998765 889999998631      11346789999999999999999999988876    


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|||+++++|.+.+.....   ....+++..+..++.|++.||.|||+++++|+||.
T Consensus       103 lv~e~~~g~~L~~~l~~~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlk  157 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRAD---AGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVK  157 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEEeCCCCCCHHHHHHHhcc---cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Confidence            99999999999988864311   03347889999999999999999999999999984

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.80  E-value=4.8e-19  Score=132.32  Aligned_cols=119  Identities=19%  Similarity=0.247  Sum_probs=103.9

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccC---CCChHHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES---MGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ..+.+.+.||+|+||.||++.... +..||+|++...   ......+.+|+.++..++|+|++++++++...    +++|
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            456677899999999999999764 889999998642   23446789999999999999999999998876    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++++|.+.+...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       102 ~~~~~~L~~~~~~~-------~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlk  148 (486)
T 3mwu_A          102 LYTGGELFDEIIKR-------KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLK  148 (486)
T ss_dssp             CCCSCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             cCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCc
Confidence            99999999998763       347899999999999999999999999999985

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.80  E-value=4.2e-19  Score=128.94  Aligned_cols=133  Identities=20%  Similarity=0.335  Sum_probs=107.2

Q ss_pred             ChHHHHhhhhhhhhccccccCceEEEEEeCC--------CcEEEEEecccCCCCh--HHHHHHHHHHcCC-CCCCccccc
Q 047548           23 NYSDVKKMTNSFSDKVRQGGYGVVYRGKLHE--------GRVAAVKVLSESMGNG--EEFINEVACISGT-SHVNIVTPL   91 (156)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~--------~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l-~~~~i~~l~   91 (156)
                      ..+++......+.+.||+|+||.||++....        +..+|+|.+.......  +.+.+|+.++..+ +|+|++++.
T Consensus        62 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~  141 (382)
T 3tt0_A           62 PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLL  141 (382)
T ss_dssp             TTTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhhe
Confidence            3345555566677899999999999998531        3579999987643322  5688999999999 999999999


Q ss_pred             eeeecc----eeeecCCCCChHHHhhhcCCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           92 GICCEG----LVYEFMSNGSLHKFIYDKGSMS---------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        92 ~~~~~~----lv~e~~~~g~L~~~l~~~~~~~---------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +.+...    +++||+++|+|.+++.......         .....+++..+..++.|++.||.|||+.+++|+||.
T Consensus       142 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  218 (382)
T 3tt0_A          142 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA  218 (382)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             eeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence            998876    9999999999999998653210         012348899999999999999999999999999985

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.80  E-value=6.9e-19  Score=122.72  Aligned_cols=122  Identities=19%  Similarity=0.306  Sum_probs=102.4

Q ss_pred             HhhhhhhhhccccccCceEEEEEeCC----CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc---e
Q 047548           28 KKMTNSFSDKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG---L   98 (156)
Q Consensus        28 ~~~~~~~~~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~---l   98 (156)
                      ......+.+.||+|+||.||++....    +..+++|.+.......  +.+.+|+.++..++|+|++++.+.+...   +
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~l   92 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI   92 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEE
T ss_pred             ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEE
Confidence            33455667899999999999998743    4578999887643322  5688999999999999999999988665   9


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++||+++++|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        93 v~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  143 (281)
T 1mp8_A           93 IMELCTLGELRSFLQVR------KYSLDLASLILYAYQLSTALAYLESKRFVHRDIA  143 (281)
T ss_dssp             EEECCTTEEHHHHHHHT------TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EEecCCCCCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence            99999999999999764      3347889999999999999999999999999985

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.80  E-value=2.7e-19  Score=130.15  Aligned_cols=119  Identities=13%  Similarity=0.183  Sum_probs=102.8

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCCCCCCccccceeeecc----eee
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVY  100 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~  100 (156)
                      ....+.+.||+|+||.||.+.... +..+|+|.+...    ....+.+.+|+.++..++|+|++++++.+...    +++
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            344566799999999999999766 889999998642    22336788999999999999999999998876    999


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++|+|..++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        95 e~~~gg~L~~~l~~~-------~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlk  142 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQN-------VHFKEETVKLFICELVMALDYLQNQRIIHRDMK  142 (384)
T ss_dssp             CCCTTEEHHHHHHTT-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             ecCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCc
Confidence            999999999999753       348899999999999999999999999999984

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.80  E-value=5.9e-19  Score=130.60  Aligned_cols=118  Identities=14%  Similarity=0.165  Sum_probs=100.5

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      .+.+.+.||+|+||.||++.... +..+|+|.+......   .+.+.+|+.++..++|+||+++++.+...    +++||
T Consensus        12 ~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~   91 (444)
T 3soa_A           12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDL   91 (444)
T ss_dssp             HEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred             CeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEe
Confidence            34566889999999999998765 889999998764322   25688999999999999999999998876    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+|.+.+...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        92 ~~gg~L~~~i~~~-------~~~~e~~~~~i~~qil~aL~~lH~~givHrDlK  137 (444)
T 3soa_A           92 VTGGELFEDIVAR-------EYYSEADASHCIQQILEAVLHCHQMGVVHRNLK  137 (444)
T ss_dssp             CBCCBHHHHHHHC-------SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCS
T ss_pred             CCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence            9999999999763       348899999999999999999999999999984

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.80  E-value=1.1e-18  Score=133.65  Aligned_cols=113  Identities=25%  Similarity=0.424  Sum_probs=98.8

Q ss_pred             ccccccCceEEEEEeC---CCcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc---eeeecCCCCCh
Q 047548           37 KVRQGGYGVVYRGKLH---EGRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG---LVYEFMSNGSL  108 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~---~~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~~~~g~L  108 (156)
                      .||+|+||.||+|.+.   .+..||+|.++....  ..+.+.+|+.++..++|+|++++++++...   +++||+++|+|
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E~~~~g~L  422 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL  422 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEECCTTCBH
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEEeCCCCcH
Confidence            6899999999999864   256799999986432  336799999999999999999999998776   99999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       423 ~~~l~~~------~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlk  463 (613)
T 2ozo_A          423 HKFLVGK------REEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLA  463 (613)
T ss_dssp             HHHHTTC------TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             HHHHhhc------cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCC
Confidence            9999754      3458899999999999999999999999999984

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.80  E-value=5.2e-19  Score=126.21  Aligned_cols=147  Identities=17%  Similarity=0.326  Sum_probs=109.0

Q ss_pred             HHHHhhCCCCCCCCChHHHHhhhhhhhhccccccCceEEEEEeC--------CCcEEEEEecccCCCCh--HHHHHHHHH
Q 047548            9 AVIRKYGSLAPKGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLH--------EGRVAAVKVLSESMGNG--EEFINEVAC   78 (156)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~--------~~~~~a~k~~~~~~~~~--~~~~~e~~~   78 (156)
                      .|+..-+..+....+.+++......+.+.||+|+||.||++...        .+..||+|.+.......  +.+.+|+.+
T Consensus        14 ~~~~~~s~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~   93 (334)
T 2pvf_A           14 PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM   93 (334)
T ss_dssp             ---------CCCCCTTTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             chhcccccccCCCCccccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHH
Confidence            34444444444445555666666777889999999999999863        25689999997643222  568899999


Q ss_pred             HcCC-CCCCccccceeeecc----eeeecCCCCChHHHhhhcCCCCC---------CCCCCCHHHHHHHHHHHHHHHHHH
Q 047548           79 ISGT-SHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMST---------KNNRLEWTTLSEIVVGVARGLECL  144 (156)
Q Consensus        79 l~~l-~~~~i~~l~~~~~~~----lv~e~~~~g~L~~~l~~~~~~~~---------~~~~~~~~~~~~i~~~i~~gl~yL  144 (156)
                      +..+ +|+|++++++.+...    +++||+++++|.+++........         ....+++..+..++.|++.||.||
T Consensus        94 l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L  173 (334)
T 2pvf_A           94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL  173 (334)
T ss_dssp             HHHHCCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence            9999 899999999998776    99999999999999986432100         012478889999999999999999


Q ss_pred             HhcCCCCcccc
Q 047548          145 IAVATLGLCIS  155 (156)
Q Consensus       145 H~~~~~h~~i~  155 (156)
                      |+++++|+||.
T Consensus       174 H~~~ivH~Dlk  184 (334)
T 2pvf_A          174 ASQKCIHRDLA  184 (334)
T ss_dssp             HHTTEECSCCS
T ss_pred             HhCCeeCCCCc
Confidence            99999999985

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.80  E-value=2.4e-19  Score=127.62  Aligned_cols=117  Identities=21%  Similarity=0.206  Sum_probs=99.4

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      ..+.+.||+|+||.||++.... +..||+|.+......  .+.+.+|+.++..++|+|++++++.+...    +++||++
T Consensus         9 y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~   88 (323)
T 3tki_A            9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS   88 (323)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             ceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCC
Confidence            3456789999999999999764 889999998653322  25688999999999999999999998876    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++..       ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        89 ~~~L~~~l~~-------~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlk  132 (323)
T 3tki_A           89 GGELFDRIEP-------DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK  132 (323)
T ss_dssp             TEEGGGGSBT-------TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             CCcHHHHHhh-------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccccc
Confidence            9999999865       3348899999999999999999999999999985

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.80  E-value=8.1e-19  Score=124.73  Aligned_cols=116  Identities=19%  Similarity=0.241  Sum_probs=100.8

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.+.||+|+||.||++.... +..+|+|++...    ....+.+.+|..++..+.|+|++++.+.+...    +++||+
T Consensus         9 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~   88 (318)
T 1fot_A            9 QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYI   88 (318)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCC
Confidence            455789999999999999865 889999998753    12335678899999999999999999998876    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        89 ~gg~L~~~l~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlk  133 (318)
T 1fot_A           89 EGGELFSLLRKS-------QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLK  133 (318)
T ss_dssp             CSCBHHHHHHHT-------SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCC
T ss_pred             CCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence            999999999763       347889999999999999999999999999984

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.79  E-value=6.6e-19  Score=125.29  Aligned_cols=129  Identities=24%  Similarity=0.370  Sum_probs=102.4

Q ss_pred             HHhhhhhhhhccccccCceEEEEEeC------CCcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc-
Q 047548           27 VKKMTNSFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG-   97 (156)
Q Consensus        27 ~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~-   97 (156)
                      +......+.+.||+|+||.||++...      .+..||+|.+......  ...+.+|+.++..++|+|++++.+.+... 
T Consensus        27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  106 (327)
T 2yfx_A           27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL  106 (327)
T ss_dssp             CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence            33444566789999999999999842      2678999999754322  25688999999999999999999998876 


Q ss_pred             ---eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 ---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 ---lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                         +++||+++++|.+++............+++..+..++.|++.||.|||+++++|+||.
T Consensus       107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlk  167 (327)
T 2yfx_A          107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIA  167 (327)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCC
Confidence               9999999999999998754222223457888999999999999999999999999985

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.79  E-value=8.8e-19  Score=124.80  Aligned_cols=111  Identities=19%  Similarity=0.258  Sum_probs=98.1

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCC-CCCccccceeeecc----eeeecCCCCChH
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTS-HVNIVTPLGICCEG----LVYEFMSNGSLH  109 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~l~~~~~~~----lv~e~~~~g~L~  109 (156)
                      +.||+|+||.||++.... +..+|+|.+...  ....+.+|+.++..+. |+|++++.+++...    +++||+++|+|.
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   94 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF   94 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHH
Confidence            579999999999999865 889999998643  3456788999999986 99999999998876    999999999999


Q ss_pred             HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          110 KFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       110 ~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        95 ~~l~~~-------~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlk  133 (325)
T 3kn6_A           95 ERIKKK-------KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLK  133 (325)
T ss_dssp             HHHHHC-------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             HHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Confidence            999763       348899999999999999999999999999985

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.79  E-value=1e-18  Score=124.84  Aligned_cols=124  Identities=24%  Similarity=0.403  Sum_probs=101.6

Q ss_pred             hhhhhccccccCceEEEEEeCC------CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----ee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LV   99 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv   99 (156)
                      ..+.+.||+|+||.||++....      +..||+|.+.......  +.+.+|+.++..++|+|++++.+++...    ++
T Consensus        49 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  128 (343)
T 1luf_A           49 IEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLL  128 (343)
T ss_dssp             CEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             CeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEE
Confidence            3455789999999999998753      4789999997643322  5688999999999999999999998776    99


Q ss_pred             eecCCCCChHHHhhhcCCCC-----------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMS-----------------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~-----------------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++++|.+++.......                 .....+++..++.++.|++.||.|||+++++|+||.
T Consensus       129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlk  201 (343)
T 1luf_A          129 FEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLA  201 (343)
T ss_dssp             EECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            99999999999997642100                 001457889999999999999999999999999985

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.79  E-value=1.7e-19  Score=129.72  Aligned_cols=132  Identities=21%  Similarity=0.327  Sum_probs=104.6

Q ss_pred             hHHHHhhhhhhhhccccccCceEEEEEeC------CCcEEEEEecccCCCCh--HHHHHHHHHHcCC-CCCCccccceee
Q 047548           24 YSDVKKMTNSFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMGNG--EEFINEVACISGT-SHVNIVTPLGIC   94 (156)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l-~~~~i~~l~~~~   94 (156)
                      .+++......+.+.||+|+||.||++.+.      .+..||+|.+.......  +.+.+|+.++..+ +|+|++++++.+
T Consensus        16 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~   95 (359)
T 3vhe_A           16 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC   95 (359)
T ss_dssp             HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeee
Confidence            34445555666789999999999999842      25789999997643322  5689999999999 789999999998


Q ss_pred             ecc-----eeeecCCCCChHHHhhhcCCCC--------------------------------------------------
Q 047548           95 CEG-----LVYEFMSNGSLHKFIYDKGSMS--------------------------------------------------  119 (156)
Q Consensus        95 ~~~-----lv~e~~~~g~L~~~l~~~~~~~--------------------------------------------------  119 (156)
                      ...     +++||+++|+|.+++.......                                                  
T Consensus        96 ~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (359)
T 3vhe_A           96 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSD  175 (359)
T ss_dssp             CSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------
T ss_pred             ecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccch
Confidence            764     8899999999999997643100                                                  


Q ss_pred             ---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          120 ---------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       120 ---------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                               .....+++..+..++.|++.||.|||+++++|+||.
T Consensus       176 ~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dik  220 (359)
T 3vhe_A          176 VEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA  220 (359)
T ss_dssp             --------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             hhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence                     001127888999999999999999999999999985

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.79  E-value=4.2e-19  Score=131.08  Aligned_cols=116  Identities=17%  Similarity=0.184  Sum_probs=100.1

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      +.++||+|+||.||++..+. +..+|+|++...    ......+..|..++..++|+|++++.+.+...    ++|||++
T Consensus        78 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~  157 (437)
T 4aw2_A           78 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYV  157 (437)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCT
T ss_pred             EEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCC
Confidence            34789999999999999876 789999998642    11224588899999999999999999998877    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|+|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       158 gg~L~~~l~~~------~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLK  202 (437)
T 4aw2_A          158 GGDLLTLLSKF------EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIK  202 (437)
T ss_dssp             TCBHHHHHHTT------TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CCcHHHHHHHc------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccC
Confidence            99999999763      3448899999999999999999999999999984

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.79  E-value=1.5e-18  Score=122.24  Aligned_cols=132  Identities=30%  Similarity=0.545  Sum_probs=110.3

Q ss_pred             CCCCChHHHHhhhhhhh--------hccccccCceEEEEEeCCCcEEEEEecccCC----CC-hHHHHHHHHHHcCCCCC
Q 047548           19 PKGYNYSDVKKMTNSFS--------DKVRQGGYGVVYRGKLHEGRVAAVKVLSESM----GN-GEEFINEVACISGTSHV   85 (156)
Q Consensus        19 ~~~~~~~~~~~~~~~~~--------~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~----~~-~~~~~~e~~~l~~l~~~   85 (156)
                      ...|+..++...+.+|.        +.||+|+||.||++.. .+..+|+|.+....    .. .+.+.+|+.++..++|+
T Consensus        12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~   90 (307)
T 2nru_A           12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE   90 (307)
T ss_dssp             CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred             CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence            45678888888887765        4599999999999986 47789999886532    11 25688999999999999


Q ss_pred             Cccccceeeecc----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           86 NIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        86 ~i~~l~~~~~~~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |++++.+++...    +++||+++++|.+++.....    ...+++..+..++.|++.||.|||+.+++|+||.
T Consensus        91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlk  160 (307)
T 2nru_A           91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG----TPPLSWHMRCKIAQGAANGINFLHENHHIHRDIK  160 (307)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG----CCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC----CCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCC
Confidence            999999998776    99999999999999975321    3457889999999999999999999999999985

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.79  E-value=9.4e-19  Score=122.36  Aligned_cols=122  Identities=16%  Similarity=0.207  Sum_probs=103.3

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      ...+.+.||+|+||.||++.... +..+++|.+.....  ..+.+.+|+.++..++|+|++++.+.+...    +++||+
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~  102 (285)
T 3is5_A           23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETC  102 (285)
T ss_dssp             HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             heeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeC
Confidence            45567899999999999999765 88999999875432  336789999999999999999999998876    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++.....   ....+++..+..++.|++.||.|||+++++|+||.
T Consensus       103 ~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dik  151 (285)
T 3is5_A          103 EGGELLERIVSAQA---RGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLK  151 (285)
T ss_dssp             SCCBHHHHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred             CCCcHHHHHHhhhh---cccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCC
Confidence            99999999864210   03458899999999999999999999999999985

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.79  E-value=1.2e-18  Score=121.17  Aligned_cols=118  Identities=15%  Similarity=0.204  Sum_probs=102.4

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCC-CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM-GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      ...+.+.||+|+||.||++.... +..+++|.+.... ...+.+.+|+.++..++|+|++++.+.+...    +++||++
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   89 (277)
T 3f3z_A           10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCT   89 (277)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             hEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccC
Confidence            34556789999999999999866 7789999887643 3346789999999999999999999998876    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        90 ~~~L~~~~~~~-------~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlk  133 (277)
T 3f3z_A           90 GGELFERVVHK-------RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLK  133 (277)
T ss_dssp             SCBHHHHHHHH-------CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCC
Confidence            99999998763       337889999999999999999999999999985

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.79  E-value=1.9e-18  Score=128.99  Aligned_cols=119  Identities=22%  Similarity=0.248  Sum_probs=103.3

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eee
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVY  100 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~  100 (156)
                      ..+.+.+.||+|+||.||++.... +..+|+|++....    .....+.+|+.++..++|+|++++++++...    +++
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  105 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG  105 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            445567899999999999999864 8899999986532    2336789999999999999999999998876    999


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+.+++|.+.+...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       106 e~~~~~~L~~~~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlk  153 (484)
T 3nyv_A          106 EVYTGGELFDEIISR-------KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLK  153 (484)
T ss_dssp             CCCCSCBHHHHHHTC-------SCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             ecCCCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCC
Confidence            999999999998753       348899999999999999999999999999985

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.79  E-value=4e-19  Score=124.43  Aligned_cols=127  Identities=25%  Similarity=0.394  Sum_probs=103.7

Q ss_pred             CCChHHHHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc
Q 047548           21 GYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG   97 (156)
Q Consensus        21 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~   97 (156)
                      .....++......+.+.||+|+||.||++...  ..+|+|.+.......   +.+.+|+.++..++|+|++++.++....
T Consensus        15 ~~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   92 (289)
T 3og7_A           15 AADDWEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP   92 (289)
T ss_dssp             ---CCBCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             CCCCCccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC
Confidence            44555666666777889999999999999764  358999987644333   5688999999999999999999977655


Q ss_pred             ---eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 ---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 ---lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                         +++||+++++|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        93 ~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlk  147 (289)
T 3og7_A           93 QLAIVTQWCEGSSLYHHLHAS------ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK  147 (289)
T ss_dssp             SCEEEEECCCEEEHHHHHTTC---------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             ccEEEEEecCCCcHHHHHhhc------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCc
Confidence               999999999999999654      3458889999999999999999999999999985

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.79  E-value=1e-18  Score=125.67  Aligned_cols=117  Identities=16%  Similarity=0.157  Sum_probs=101.4

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ..+.+.||+|+||.||.+.... +..+|+|++....    ...+.+.+|+.++..+.|+|++++.+.+...    ++|||
T Consensus        43 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  122 (350)
T 1rdq_E           43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY  122 (350)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcC
Confidence            3455789999999999999865 8899999986432    2336788999999999999999999998876    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       123 ~~gg~L~~~l~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlk  168 (350)
T 1rdq_E          123 VAGGEMFSHLRRI-------GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK  168 (350)
T ss_dssp             CTTCBHHHHHHHH-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCc
Confidence            9999999999764       237899999999999999999999999999984

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.79  E-value=4.7e-19  Score=129.31  Aligned_cols=120  Identities=24%  Similarity=0.294  Sum_probs=102.1

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCC--CChHHHHHHHHHHcCCCCCCccccceeeecc------eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM--GNGEEFINEVACISGTSHVNIVTPLGICCEG------LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv~e~  102 (156)
                      +.+.+.||+|+||.||++.... +..||+|.+....  ...+.+.+|+.++..++|+|++++++++...      +++||
T Consensus        11 y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~   90 (396)
T 4eut_A           11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF   90 (396)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECC
T ss_pred             eEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEec
Confidence            4456789999999999999876 8899999987533  2236678999999999999999999987653      89999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+|.+++.....    ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        91 ~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  139 (396)
T 4eut_A           91 CPCGSLYTVLEEPSN----AYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIK  139 (396)
T ss_dssp             CTTEEHHHHTTSGGG----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             CCCCCHHHHHHhhhc----ccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcC
Confidence            999999999976421    2338899999999999999999999999999984

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.79  E-value=6.5e-19  Score=126.64  Aligned_cols=116  Identities=21%  Similarity=0.255  Sum_probs=94.9

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      ..+.+.||+|+||.||++.... +..||+|.+.... ..+.+.+|+.++..++|+|++++.+++...    +++||++++
T Consensus        55 y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  133 (349)
T 2w4o_A           55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGG  133 (349)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             EEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCC
Confidence            3455789999999999999875 7899999987542 335678899999999999999999998876    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++...       ..+++..+..++.|++.||.|||+.+++|+||.
T Consensus       134 ~L~~~l~~~-------~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dik  175 (349)
T 2w4o_A          134 ELFDRIVEK-------GYYSERDAADAVKQILEAVAYLHENGIVHRDLK  175 (349)
T ss_dssp             BHHHHHTTC-------SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             CHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCC
Confidence            999998753       347899999999999999999999999999985

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.79  E-value=1.6e-18  Score=122.57  Aligned_cols=113  Identities=22%  Similarity=0.233  Sum_probs=98.2

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCCCCCh
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMSNGSL  108 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~~g~L  108 (156)
                      +.||+|+||.||++.... +..||+|.+...... ...+.+|+.++..+ +|+|++++.+.+...    +++||+++++|
T Consensus        19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   98 (316)
T 2ac3_A           19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI   98 (316)
T ss_dssp             CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred             ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence            579999999999998654 889999998764333 46788999999874 799999999998876    99999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        99 ~~~l~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlk  138 (316)
T 2ac3_A           99 LSHIHKR-------RHFNELEASVVVQDVASALDFLHNKGIAHRDLK  138 (316)
T ss_dssp             HHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             HHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCC
Confidence            9999763       347889999999999999999999999999985

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.79  E-value=4e-19  Score=130.30  Aligned_cols=114  Identities=16%  Similarity=0.179  Sum_probs=99.0

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      +.++||+|+||.||++.... +..+|+|++...    ......+.+|..++..++|+|++++++.+...    ++|||++
T Consensus        73 ~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~  152 (410)
T 3v8s_A           73 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMP  152 (410)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred             EEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence            44789999999999999876 889999998642    22234578999999999999999999999877    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|+|.+++...        .+++..+..++.|++.||.|||+++++|+||.
T Consensus       153 gg~L~~~l~~~--------~~~e~~~~~~~~qi~~aL~~LH~~givHrDLK  195 (410)
T 3v8s_A          153 GGDLVNLMSNY--------DVPEKWARFYTAEVVLALDAIHSMGFIHRDVK  195 (410)
T ss_dssp             TEEHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CCcHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCC
Confidence            99999998753        37889999999999999999999999999984

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.79  E-value=1e-18  Score=130.79  Aligned_cols=118  Identities=19%  Similarity=0.235  Sum_probs=98.6

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCC---CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM---GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      .+.+.+.||+|+||.||++.... +..+|+|++....   .....+.+|+.++..++|+||+++++++...    +++||
T Consensus        38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~  117 (494)
T 3lij_A           38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC  117 (494)
T ss_dssp             HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence            34556789999999999999865 8899999987532   2236789999999999999999999999876    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+|.+.+...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       118 ~~~g~L~~~~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlk  163 (494)
T 3lij_A          118 YKGGELFDEIIHR-------MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLK  163 (494)
T ss_dssp             CCSCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             CCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Confidence            9999999988763       337889999999999999999999999999985

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.79  E-value=8.9e-19  Score=128.74  Aligned_cols=117  Identities=16%  Similarity=0.161  Sum_probs=99.5

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---------ChHHHHHHHHHHcCCCCCCccccceeeecc---e
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---------NGEEFINEVACISGTSHVNIVTPLGICCEG---L   98 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---------~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---l   98 (156)
                      +.+.+.||+|+||.||++.... +..+|+|.+.....         ....+.+|+.++..++|+|++++.+++...   +
T Consensus       137 y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~l  216 (419)
T 3i6u_A          137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYI  216 (419)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESSEEEE
T ss_pred             EEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecCceEE
Confidence            4456789999999999998766 88999999864211         113478999999999999999999998766   9


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++||+++++|.+++..       ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       217 v~e~~~~g~L~~~l~~-------~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlk  266 (419)
T 3i6u_A          217 VLELMEGGELFDKVVG-------NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLK  266 (419)
T ss_dssp             EEECCTTCBGGGGTSS-------SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             EEEcCCCCcHHHHHhc-------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence            9999999999998865       3448899999999999999999999999999984

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.79  E-value=9.8e-19  Score=131.17  Aligned_cols=117  Identities=24%  Similarity=0.305  Sum_probs=98.9

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCC--------------CChHHHHHHHHHHcCCCCCCccccceeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM--------------GNGEEFINEVACISGTSHVNIVTPLGICCE   96 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~--------------~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~   96 (156)
                      +.+.+.||+|+||.||++.... +..+|+|++....              ...+.+.+|+.++..++||||+++++++..
T Consensus        38 Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~  117 (504)
T 3q5i_A           38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFED  117 (504)
T ss_dssp             EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             eEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence            3455789999999999999865 7899999987532              123568899999999999999999999987


Q ss_pred             c----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           97 G----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        97 ~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .    +++||+++|+|.+.+...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       118 ~~~~~lv~e~~~gg~L~~~l~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlk  173 (504)
T 3q5i_A          118 KKYFYLVTEFYEGGELFEQIINR-------HKFDECDAANIMKQILSGICYLHKHNIVHRDIK  173 (504)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             CCEEEEEEecCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCc
Confidence            7    999999999999998763       338899999999999999999999999999985

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.79  E-value=1.1e-18  Score=123.14  Aligned_cols=130  Identities=17%  Similarity=0.362  Sum_probs=104.3

Q ss_pred             HHHhhhhhhhhccccccCceEEEEEeC------CCcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc
Q 047548           26 DVKKMTNSFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG   97 (156)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~   97 (156)
                      ++......+.+.||+|+||.||++...      .+..+|+|.+.......  +.+.+|+.++..++|+|++++++.+...
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   98 (314)
T 2ivs_A           19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD   98 (314)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             ccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence            344445566789999999999999862      24789999997543222  5688999999999999999999998776


Q ss_pred             ----eeeecCCCCChHHHhhhcCCCCC-----------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 ----LVYEFMSNGSLHKFIYDKGSMST-----------------KNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 ----lv~e~~~~g~L~~~l~~~~~~~~-----------------~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                          +++||+++++|.+++........                 ....+++..+..++.|++.||.|||+++++|+||.
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dik  177 (314)
T 2ivs_A           99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLA  177 (314)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccc
Confidence                99999999999999986432100                 01337788999999999999999999999999985

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.79  E-value=7.6e-19  Score=125.12  Aligned_cols=120  Identities=21%  Similarity=0.373  Sum_probs=98.2

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-Cc----EEEEEecccCC--CChHHHHHHHHHHcCCCCCCccccceeeecc---ee
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GR----VAAVKVLSESM--GNGEEFINEVACISGTSHVNIVTPLGICCEG---LV   99 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~----~~a~k~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv   99 (156)
                      ....+.+.||+|+||.||++.... +.    .+++|.+....  ...+.+.+|+.++..++|+|++++++++...   ++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v   94 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   94 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence            344556789999999999998643 33    46888876533  2336789999999999999999999999877   89


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++++|+|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        95 ~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dik  144 (327)
T 3poz_A           95 TQLMPFGCLLDYVREH------KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA  144 (327)
T ss_dssp             EECCTTCBHHHHHHHS------TTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             EEecCCCcHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCC
Confidence            9999999999999865      3448889999999999999999999999999985

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.79  E-value=4.5e-19  Score=126.04  Aligned_cols=116  Identities=27%  Similarity=0.375  Sum_probs=99.1

Q ss_pred             hhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc--------eeeec
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG--------LVYEF  102 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~--------lv~e~  102 (156)
                      ...+.+.||+|+||.||++... +..||+|.+............|+.++..++|+|++++++.+...        +++||
T Consensus        25 ~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~  103 (322)
T 3soc_A           25 PLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAF  103 (322)
T ss_dssp             EEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             hchhhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEec
Confidence            3455678999999999999876 78899999876543445566788889999999999999987763        89999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc----------CCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV----------ATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~----------~~~h~~i~  155 (156)
                      +++|+|.+++...        .+++..+..++.|++.||.|||+.          +++|+||.
T Consensus       104 ~~~g~L~~~l~~~--------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlk  158 (322)
T 3soc_A          104 HEKGSLSDFLKAN--------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIK  158 (322)
T ss_dssp             CTTCBHHHHHHHC--------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCS
T ss_pred             CCCCCHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCC
Confidence            9999999999753        378999999999999999999999          99999984

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.79  E-value=6.5e-19  Score=126.89  Aligned_cols=118  Identities=20%  Similarity=0.218  Sum_probs=100.9

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCC-CCCCccccceeeecc----eee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGT-SHVNIVTPLGICCEG----LVY  100 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~  100 (156)
                      ...+.++||+|+||.||++.... +..+|+|++...    ......+..|..++..+ .|+|++++.+.+...    ++|
T Consensus        24 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~  103 (353)
T 3txo_A           24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVM  103 (353)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             heEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEE
Confidence            34556789999999999999865 889999998753    12235678889999877 799999999998876    999


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       104 E~~~gg~L~~~l~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlk  151 (353)
T 3txo_A          104 EFVNGGDLMFHIQKS-------RRFDEARARFYAAEIISALMFLHDKGIIYRDLK  151 (353)
T ss_dssp             ECCCSCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCC
T ss_pred             eCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Confidence            999999999999764       348899999999999999999999999999984

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.79  E-value=6.8e-19  Score=126.42  Aligned_cols=117  Identities=15%  Similarity=0.209  Sum_probs=100.0

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCC-CCCCccccceeeecc----eeee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ..+.+.||+|+||.||++..+. +..+|+|.+...    .........|..++..+ +|+|++++.+.+...    ++||
T Consensus        19 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E   98 (345)
T 1xjd_A           19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME   98 (345)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEe
Confidence            3456789999999999999875 889999998753    22335677888888866 899999999998876    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        99 ~~~gg~L~~~l~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlk  145 (345)
T 1xjd_A           99 YLNGGDLMYHIQSC-------HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLK  145 (345)
T ss_dssp             CCTTCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCC
T ss_pred             CCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCC
Confidence            99999999999763       337889999999999999999999999999984

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.78  E-value=1.3e-18  Score=124.98  Aligned_cols=117  Identities=16%  Similarity=0.162  Sum_probs=99.9

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC----hHHHHHHHHHHcCC-CCCCccccceeeecc----eeee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN----GEEFINEVACISGT-SHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~----~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ..+.+.||+|+||.||++..+. +..+|+|++......    .+.+.+|..++..+ +|+|++++.+.+...    +++|
T Consensus        11 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e   90 (345)
T 3a8x_A           11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE   90 (345)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred             eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEe
Confidence            3455789999999999999865 889999999754322    14577889988877 899999999998876    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        91 ~~~gg~L~~~l~~~-------~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlk  137 (345)
T 3a8x_A           91 YVNGGDLMFHMQRQ-------RKLPEEHARFYSAEISLALNYLHERGIIYRDLK  137 (345)
T ss_dssp             CCCSCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCC
T ss_pred             CCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence            99999999999763       347899999999999999999999999999984

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.78  E-value=1.9e-18  Score=120.97  Aligned_cols=116  Identities=22%  Similarity=0.308  Sum_probs=99.6

Q ss_pred             hhhhccccccCceEEEEEeCCCcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      .+.+.||+|+||.||++....+..+|+|.+......   .+.+.+|+.++..++|+|++++.+.+...    +++||+++
T Consensus         5 ~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   84 (288)
T 1ob3_A            5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ   84 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE
T ss_pred             hhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC
Confidence            455789999999999999866889999998654322   25688999999999999999999998776    99999976


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       +|.+++...      ...++...+..++.|++.||.|||+++++|+||.
T Consensus        85 -~l~~~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  127 (288)
T 1ob3_A           85 -DLKKLLDVC------EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK  127 (288)
T ss_dssp             -EHHHHHHTS------TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             -CHHHHHHhc------ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence             999988754      3447889999999999999999999999999985

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=1.6e-18  Score=125.63  Aligned_cols=116  Identities=28%  Similarity=0.484  Sum_probs=97.1

Q ss_pred             hhhccccccCceEEEEEeCC----CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc-----eeeec
Q 047548           34 FSDKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG-----LVYEF  102 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----lv~e~  102 (156)
                      +.+.||+|+||.||++....    +..+|+|.+.......  +.+.+|+.++..++|+|++++++++...     +++||
T Consensus        93 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~  172 (373)
T 3c1x_A           93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY  172 (373)
T ss_dssp             EEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred             cCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEEC
Confidence            34689999999999998642    3468899887543222  5789999999999999999999986543     89999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       173 ~~~g~L~~~l~~~------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk  219 (373)
T 3c1x_A          173 MKHGDLRNFIRNE------THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLA  219 (373)
T ss_dssp             CTTCBHHHHHHCT------TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             CCCCCHHHHHhhc------ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccc
Confidence            9999999999764      3447788999999999999999999999999985

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.78  E-value=4.3e-19  Score=125.48  Aligned_cols=118  Identities=16%  Similarity=0.183  Sum_probs=100.5

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh----HHHHHHHHHHcCCCCCCccccceeeecc--------
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG----EEFINEVACISGTSHVNIVTPLGICCEG--------   97 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~----~~~~~e~~~l~~l~~~~i~~l~~~~~~~--------   97 (156)
                      .+.+.+.||+|+||.||++.... +..||+|.+.......    ..+.+|+.++..++|+|++++++.+...        
T Consensus        13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~   92 (311)
T 3ork_A           13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY   92 (311)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccE
Confidence            44566899999999999999754 8899999997643222    4678999999999999999999886643        


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++||+++++|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        93 lv~e~~~g~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlk  143 (311)
T 3ork_A           93 IVMEYVDGVTLRDIVHTE-------GPMTPKRAIEVIADACQALNFSHQNGIIHRDVK  143 (311)
T ss_dssp             EEEECCCEEEHHHHHHHH-------CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             EEEecCCCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCC
Confidence            899999999999999763       347889999999999999999999999999985

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.78  E-value=1.1e-18  Score=123.52  Aligned_cols=117  Identities=26%  Similarity=0.388  Sum_probs=98.2

Q ss_pred             hhhhhccccccCceEEEEEeCCCcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      +.+.+.||+|+||.||++....+..+|+|.+.......   ..+.+|+.++..++|+|++++.+.+...    +++||++
T Consensus        23 y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~  102 (311)
T 3niz_A           23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME  102 (311)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS
T ss_pred             hHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC
Confidence            34557899999999999998778999999987543222   5688999999999999999999998876    9999998


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      + +|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       103 ~-~l~~~~~~~------~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dik  146 (311)
T 3niz_A          103 K-DLKKVLDEN------KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLK  146 (311)
T ss_dssp             E-EHHHHHHTC------TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             C-CHHHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCc
Confidence            5 888888754      3448889999999999999999999999999985

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.78  E-value=1.3e-18  Score=122.29  Aligned_cols=120  Identities=21%  Similarity=0.344  Sum_probs=101.9

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC-ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      ....+.+.||+|+||.||++.... +..+++|.+..... ..+.+.+|+.++..++|+|++++.+.+...    +++||+
T Consensus        19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   98 (302)
T 2j7t_A           19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC   98 (302)
T ss_dssp             GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECC
T ss_pred             cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeC
Confidence            344566789999999999999875 88999999875433 346789999999999999999999988776    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++...      ...++...+..++.|++.||.|||+++++|+||.
T Consensus        99 ~~~~l~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk  144 (302)
T 2j7t_A           99 PGGAVDAIMLEL------DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLK  144 (302)
T ss_dssp             TTEEHHHHHHHH------TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred             CCCcHHHHHHhh------ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Confidence            999999998764      3448899999999999999999999999999985

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.78  E-value=7.2e-19  Score=125.32  Aligned_cols=119  Identities=20%  Similarity=0.239  Sum_probs=96.9

Q ss_pred             hhhhhhhccccccCceEEEEEeC----CCcEEEEEecccCC-----CChHHHHHHHHHHcCCCCCCccccceeeecc---
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLH----EGRVAAVKVLSESM-----GNGEEFINEVACISGTSHVNIVTPLGICCEG---   97 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~----~~~~~a~k~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---   97 (156)
                      ....+.+.||+|+||.||++...    .+..+|+|++....     .....+.+|+.++..++|+|++++++.+...   
T Consensus        17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   96 (327)
T 3a62_A           17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL   96 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred             HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence            44556689999999999999863    48899999987532     1224577899999999999999999998776   


Q ss_pred             -eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 -LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 -lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       +++||+++++|.+++...       ..++...+..++.|++.||.|||+++++|+||.
T Consensus        97 ~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlk  148 (327)
T 3a62_A           97 YLILEYLSGGELFMQLERE-------GIFMEDTACFYLAEISMALGHLHQKGIIYRDLK  148 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             EEEEeCCCCCcHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCC
Confidence             999999999999999763       337888999999999999999999999999985

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.78  E-value=3.1e-18  Score=120.17  Aligned_cols=117  Identities=27%  Similarity=0.480  Sum_probs=97.4

Q ss_pred             hhhhccccccCceEEEEEeCC----CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc-----eeee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG-----LVYE  101 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----lv~e  101 (156)
                      .+.+.||+|+||.||++....    ...+++|.+.......  +.+.+|+.++..++|+|++++.+.+...     +++|
T Consensus        28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e  107 (298)
T 3f66_A           28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP  107 (298)
T ss_dssp             EEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEE
T ss_pred             hhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEe
Confidence            445789999999999998643    3357888887543222  5688999999999999999999986543     8999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++++|.+++...      ...++...+..++.|++.||.|||+++++|+||.
T Consensus       108 ~~~~~~L~~~l~~~------~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dik  155 (298)
T 3f66_A          108 YMKHGDLRNFIRNE------THNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLA  155 (298)
T ss_dssp             CCTTCBHHHHHHCT------TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             CCCCCCHHHHHHhc------ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCc
Confidence            99999999999754      3447889999999999999999999999999985

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.78  E-value=1.9e-18  Score=122.65  Aligned_cols=119  Identities=18%  Similarity=0.287  Sum_probs=102.7

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC-------ChHHHHHHHHHHcCCCCCCccccceeeecc----
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-------NGEEFINEVACISGTSHVNIVTPLGICCEG----   97 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----   97 (156)
                      ..+.+.+.||+|+||.||++.... +..+|+|.+.....       ..+.+.+|+.++..+.|+|++++.+.+...    
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            345567899999999999999765 88999999875321       235688999999999999999999998876    


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++||+++++|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        92 lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dik  142 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQK-------ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLK  142 (321)
T ss_dssp             EEECCCCSCBHHHHHHTC-------SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             EEEEcCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            999999999999999753       347889999999999999999999999999985

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.78  E-value=2.1e-18  Score=120.18  Aligned_cols=118  Identities=20%  Similarity=0.313  Sum_probs=102.1

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC-------ChHHHHHHHHHHcCCCCCCccccceeeecc----e
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-------NGEEFINEVACISGTSHVNIVTPLGICCEG----L   98 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----l   98 (156)
                      ...+.+.||+|+||.||++.... +..+|+|.+.....       ..+.+.+|+.++..++|+|++++.+.+...    +
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   85 (283)
T 3bhy_A            6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL   85 (283)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEE
Confidence            34566789999999999999875 88999998875321       236788999999999999999999998876    9


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++||+++++|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        86 v~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~  135 (283)
T 3bhy_A           86 ILELVSGGELFDFLAEK-------ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLK  135 (283)
T ss_dssp             EEECCCSCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEeecCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCC
Confidence            99999999999999753       347899999999999999999999999999985

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.78  E-value=1e-18  Score=127.53  Aligned_cols=116  Identities=16%  Similarity=0.171  Sum_probs=99.2

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC----hHHHHHHHHHHcCC-CCCCccccceeeecc----eeeec
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN----GEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~----~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      .+.++||+|+||.||++..+. +..+|+|++......    ...+..|..++..+ +|+|++++.+++...    +++||
T Consensus        55 ~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~  134 (396)
T 4dc2_A           55 DLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEY  134 (396)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEc
Confidence            455789999999999999876 889999998753221    24577888888776 899999999998876    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+|..++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       135 ~~gg~L~~~l~~~-------~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLK  180 (396)
T 4dc2_A          135 VNGGDLMFHMQRQ-------RKLPEEHARFYSAEISLALNYLHERGIIYRDLK  180 (396)
T ss_dssp             CTTCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCC
T ss_pred             CCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCC
Confidence            9999999999763       348899999999999999999999999999984

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.78  E-value=1.2e-18  Score=129.85  Aligned_cols=118  Identities=20%  Similarity=0.289  Sum_probs=102.1

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      .+.+.+.||+|+||.||++.... +..||+|++....    .....+.+|+.+++.++|+|++++++.+...    +++|
T Consensus        17 ~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E   96 (476)
T 2y94_A           17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVME   96 (476)
T ss_dssp             TEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            34566789999999999999764 8999999986532    1235688999999999999999999998876    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++|+|.+++..       ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        97 ~~~gg~L~~~l~~-------~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLk  143 (476)
T 2y94_A           97 YVSGGELFDYICK-------NGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLK  143 (476)
T ss_dssp             CCSSEEHHHHTTS-------SSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCS
T ss_pred             CCCCCcHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHCCCCccccc
Confidence            9999999999975       3348899999999999999999999999999984

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.78  E-value=1.3e-18  Score=122.98  Aligned_cols=118  Identities=23%  Similarity=0.333  Sum_probs=100.1

Q ss_pred             hhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc--eeeecCCCCChH
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG--LVYEFMSNGSLH  109 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~--lv~e~~~~g~L~  109 (156)
                      ..+.+.||+|+||.||++... +..+|+|.+... ...+.+.+|+.++..++|+|++++++.+...  +++||+++++|.
T Consensus        10 ~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~~L~   87 (307)
T 2eva_A           10 IEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLY   87 (307)
T ss_dssp             EEEEEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTTCBHH
T ss_pred             eeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCCCCHH
Confidence            345678999999999999875 678999998643 2346789999999999999999999988776  999999999999


Q ss_pred             HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---cCCCCcccc
Q 047548          110 KFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA---VATLGLCIS  155 (156)
Q Consensus       110 ~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~---~~~~h~~i~  155 (156)
                      +++.....    ...++...+..++.|++.||.|||+   ++++|+||.
T Consensus        88 ~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlk  132 (307)
T 2eva_A           88 NVLHGAEP----LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK  132 (307)
T ss_dssp             HHHHCSSS----EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCS
T ss_pred             HHHhccCC----CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCC
Confidence            99976421    2346788899999999999999999   889999985

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.78  E-value=4.4e-19  Score=128.86  Aligned_cols=145  Identities=18%  Similarity=0.196  Sum_probs=108.7

Q ss_pred             hhHHHHHHhhCCCCCCCCChHHHHhhhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCC
Q 047548            5 QDVDAVIRKYGSLAPKGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTS   83 (156)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~   83 (156)
                      ++.++....+..+....+...++....+.+.+.||+|+||.||++.... +..||+|.+.......+.+.+|+.++..+.
T Consensus        12 ~~~~e~~~~~~~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~   91 (397)
T 1wak_A           12 DDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVR   91 (397)
T ss_dssp             ----------CC--CCSSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccCCCCCceEEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHh
Confidence            3445566777777777777777777777788899999999999998755 889999998754333467888999888774


Q ss_pred             --------CCCccccceeee----cc----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 047548           84 --------HVNIVTPLGICC----EG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV  147 (156)
Q Consensus        84 --------~~~i~~l~~~~~----~~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~  147 (156)
                              |+|++++++.+.    ..    +++||+ ++++.+.+....     ...+++..+..++.|++.||.|||++
T Consensus        92 ~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~  165 (397)
T 1wak_A           92 NSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSN-----YQGLPLPCVKKIIQQVLQGLDYLHTK  165 (397)
T ss_dssp             HSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTT-----TSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hcCCCCCCcceeeeeecceeecCCCCceEEEEEecc-CccHHHHHHhcc-----cCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence                    778999998876    22    999999 567777776532     34588999999999999999999999


Q ss_pred             -CCCCcccc
Q 047548          148 -ATLGLCIS  155 (156)
Q Consensus       148 -~~~h~~i~  155 (156)
                       +++|+||.
T Consensus       166 ~givHrDik  174 (397)
T 1wak_A          166 CRIIHTDIK  174 (397)
T ss_dssp             TCEECCCCS
T ss_pred             CCEecCCCC
Confidence             99999984

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.78  E-value=7.4e-19  Score=128.93  Aligned_cols=116  Identities=16%  Similarity=0.178  Sum_probs=99.8

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      +.++||+|+||.||++..+. +..+|+|++....    ...+.+.+|..++..++|++++++.+.+...    ++|||++
T Consensus        65 ~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~  144 (412)
T 2vd5_A           65 ILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYV  144 (412)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCC
Confidence            44789999999999999865 8999999986421    1224578899999999999999999998876    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|+|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       145 gg~L~~~l~~~------~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLK  189 (412)
T 2vd5_A          145 GGDLLTLLSKF------GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIK  189 (412)
T ss_dssp             SCBHHHHHHHH------SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CCcHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccC
Confidence            99999999764      2348899999999999999999999999999984

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.78  E-value=1.8e-18  Score=121.29  Aligned_cols=118  Identities=16%  Similarity=0.197  Sum_probs=99.7

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeec-------------c
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCE-------------G   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~-------------~   97 (156)
                      ..+.+.||+|+||.||++.... +..+|+|.+.......+.+.+|+.++..++|+|++++.+.+..             .
T Consensus         8 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~   87 (303)
T 1zy4_A            8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKK   87 (303)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CE
T ss_pred             chhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccC
Confidence            3455789999999999999754 8899999986543334678899999999999999999887642             1


Q ss_pred             ----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 ----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 ----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                          +++||+++++|.+++...      ...++...+..++.|++.||.|||+++++|+||.
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlk  143 (303)
T 1zy4_A           88 STLFIQMEYCENGTLYDLIHSE------NLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLK  143 (303)
T ss_dssp             EEEEEEEECCCSCBHHHHHHHS------CGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             CceEEEEecCCCCCHHHhhhcc------ccccchHHHHHHHHHHHHHHHHHHhCCeecccCC
Confidence                899999999999999764      3346778889999999999999999999999985

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.78  E-value=1.1e-18  Score=121.53  Aligned_cols=121  Identities=19%  Similarity=0.288  Sum_probs=101.3

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCC-CCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ..+.+.||+|+||.||++.... +..+|+|.+......   ...+.+|+..+..+ +|+|++++.+.+...    +++||
T Consensus        13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~   92 (289)
T 1x8b_A           13 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEY   92 (289)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEe
Confidence            4456789999999999999864 889999998754322   25678888888888 999999999998776    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++.....   ....+++..+..++.|++.||.|||+++++|+||.
T Consensus        93 ~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dik  142 (289)
T 1x8b_A           93 CNGGSLADAISENYR---IMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIK  142 (289)
T ss_dssp             CTTCBHHHHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             cCCCcHHHHHHhhcc---cccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCC
Confidence            999999999975311   02447899999999999999999999999999985

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.78  E-value=1.3e-18  Score=133.74  Aligned_cols=112  Identities=23%  Similarity=0.401  Sum_probs=97.7

Q ss_pred             ccccccCceEEEEEeC---CCcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc---eeeecCCCCC
Q 047548           37 KVRQGGYGVVYRGKLH---EGRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG---LVYEFMSNGS  107 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~---~~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~~~~g~  107 (156)
                      .||+|+||.||++.+.   .+..||+|+++.....   .+.+.+|+.++..++|+||+++++++...   ++|||+++|+
T Consensus       376 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g~  455 (635)
T 4fl3_A          376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGP  455 (635)
T ss_dssp             EEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEE
T ss_pred             EeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCCC
Confidence            6999999999999653   2678999999764332   26799999999999999999999998766   9999999999


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       456 L~~~l~~~-------~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLk  496 (635)
T 4fl3_A          456 LNKYLQQN-------RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLA  496 (635)
T ss_dssp             HHHHHHHC-------TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             HHHHHhhC-------CCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCC
Confidence            99999753       347889999999999999999999999999984

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=1.3e-18  Score=124.27  Aligned_cols=117  Identities=25%  Similarity=0.445  Sum_probs=99.4

Q ss_pred             hhhhccccccCceEEEEEeCC-----CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-----GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-----~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      .+.+.||+|+||.||++....     +..||+|.+.......  ..+.+|+.++..++|+|++++.+.+...    +++|
T Consensus        47 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  126 (333)
T 1mqb_A           47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITE  126 (333)
T ss_dssp             EEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             hcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEe
Confidence            445789999999999998643     2358999987543222  4688999999999999999999998776    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++++|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       127 ~~~~~~L~~~l~~~------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dik  174 (333)
T 1mqb_A          127 YMENGALDKFLREK------DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLA  174 (333)
T ss_dssp             CCTTEEHHHHHHHT------TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             CCCCCcHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence            99999999999764      3458899999999999999999999999999985

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.78  E-value=1.8e-18  Score=123.27  Aligned_cols=117  Identities=18%  Similarity=0.275  Sum_probs=98.1

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      .+.+.+.||+|+||.||++.... +..||+|.+.......   ..+.+|+.++..++|+|++++.+++...    +++||
T Consensus        35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  114 (329)
T 3gbz_A           35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEY  114 (329)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEec
Confidence            34556789999999999998765 8899999997543222   4577999999999999999999998876    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++ +|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       115 ~~~-~L~~~~~~~-------~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlk  159 (329)
T 3gbz_A          115 AEN-DLKKYMDKN-------PDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLK  159 (329)
T ss_dssp             CSE-EHHHHHHHC-------TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             CCC-CHHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCC
Confidence            975 999999763       347889999999999999999999999999984

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.78  E-value=1.6e-18  Score=122.35  Aligned_cols=131  Identities=24%  Similarity=0.359  Sum_probs=105.3

Q ss_pred             HHHHhhhhhhhhccccccCceEEEEEeC------CCcEEEEEecccCCCC--hHHHHHHHHHHcCC-CCCCccccceeee
Q 047548           25 SDVKKMTNSFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMGN--GEEFINEVACISGT-SHVNIVTPLGICC   95 (156)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~l~~~~~   95 (156)
                      .++......+.+.||+|+||.||++...      .+..||+|.+......  .+.+.+|+.++..+ +|+|++++.+.+.
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   97 (313)
T 1t46_A           18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT   97 (313)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence            3444555667789999999999999851      2678999998765432  25688999999999 9999999999987


Q ss_pred             cc----eeeecCCCCChHHHhhhcCCC-----------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           96 EG----LVYEFMSNGSLHKFIYDKGSM-----------STKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        96 ~~----lv~e~~~~g~L~~~l~~~~~~-----------~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ..    +++||+++|+|.+++......           ......+++..+..++.|++.||.|||+++++|+||.
T Consensus        98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  172 (313)
T 1t46_A           98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA  172 (313)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCc
Confidence            76    999999999999999764310           0012247889999999999999999999999999985

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.78  E-value=2.8e-18  Score=120.88  Aligned_cols=118  Identities=23%  Similarity=0.265  Sum_probs=100.0

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      ...+.+.||+|+||.||.+.... +..+|+|.+...... .+.+.+|+.++..++|+|++++.+.+...    +++||++
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   89 (304)
T 2jam_A           10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVS   89 (304)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             cceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCC
Confidence            34566789999999999999764 889999998764332 35688999999999999999999988776    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        90 ~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dik  133 (304)
T 2jam_A           90 GGELFDRILER-------GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLK  133 (304)
T ss_dssp             SCBHHHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCC
T ss_pred             CccHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence            99999998763       337889999999999999999999999999985

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=4.1e-18  Score=119.45  Aligned_cols=116  Identities=26%  Similarity=0.389  Sum_probs=98.0

Q ss_pred             hhhccccccCceEEEEEeCC----CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc-----eeeec
Q 047548           34 FSDKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG-----LVYEF  102 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----lv~e~  102 (156)
                      ..+.||+|+||.||++....    +..+|+|.+.......  +.+.+|+.++..++|+|++++.+++...     +++||
T Consensus        25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~  104 (298)
T 3pls_A           25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY  104 (298)
T ss_dssp             EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECC
T ss_pred             cCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEec
Confidence            34789999999999998643    2368999887543322  5688999999999999999999998754     89999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +.+++|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       105 ~~~~~L~~~~~~~------~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dik  151 (298)
T 3pls_A          105 MCHGDLLQFIRSP------QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLA  151 (298)
T ss_dssp             CTTCBHHHHHHCT------TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             ccCCCHHHHHhcc------ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            9999999999764      3457889999999999999999999999999985

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.78  E-value=8.3e-19  Score=126.22  Aligned_cols=123  Identities=17%  Similarity=0.138  Sum_probs=102.1

Q ss_pred             HHhhhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCC-----CCCccccceeeecc---
Q 047548           27 VKKMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTS-----HVNIVTPLGICCEG---   97 (156)
Q Consensus        27 ~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~-----~~~i~~l~~~~~~~---   97 (156)
                      +......+.+.||+|+||.||++.... +..||+|++.........+..|+.++..+.     |+|++++.+.+...   
T Consensus        32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~  111 (360)
T 3llt_A           32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHM  111 (360)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEE
T ss_pred             EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCee
Confidence            333445566899999999999999855 889999998754333456778888888775     99999999988776   


Q ss_pred             -eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 -LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 -lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       +++|++ +++|.+++....     ...++...+..++.|++.||.|||+++++|+||.
T Consensus       112 ~lv~e~~-~~~L~~~~~~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk  164 (360)
T 3llt_A          112 CLIFEPL-GPSLYEIITRNN-----YNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLK  164 (360)
T ss_dssp             EEEECCC-CCBHHHHHHHTT-----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEEEcCC-CCCHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCC
Confidence             999999 889999998643     3458889999999999999999999999999984

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.78  E-value=3.1e-18  Score=120.03  Aligned_cols=116  Identities=22%  Similarity=0.331  Sum_probs=98.3

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .+.+.||+|+||.||++.... +..+|+|.+.......   ..+.+|+.++..++|+|++++.+.+...    +++||++
T Consensus         5 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   84 (292)
T 3o0g_A            5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD   84 (292)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             eeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCC
Confidence            345789999999999999865 8899999987543322   5688999999999999999999998776    9999997


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      + ++.+.+...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        85 ~-~l~~~~~~~------~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dik  128 (292)
T 3o0g_A           85 Q-DLKKYFDSC------NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLK  128 (292)
T ss_dssp             E-EHHHHHHHT------TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             C-CHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            6 677766553      3458899999999999999999999999999985

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.77  E-value=2.4e-18  Score=122.43  Aligned_cols=118  Identities=25%  Similarity=0.449  Sum_probs=100.2

Q ss_pred             hhhhhccccccCceEEEEEe-----CCCcEEEEEecccCCCCh-HHHHHHHHHHcCCCCCCccccceeeecc------ee
Q 047548           32 NSFSDKVRQGGYGVVYRGKL-----HEGRVAAVKVLSESMGNG-EEFINEVACISGTSHVNIVTPLGICCEG------LV   99 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~-----~~~~~~a~k~~~~~~~~~-~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv   99 (156)
                      ..+.+.||+|+||.||++.+     ..+..||+|.+....... +.+.+|+.++..++|+|++++.+.+...      ++
T Consensus        43 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv  122 (326)
T 2w1i_A           43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI  122 (326)
T ss_dssp             EEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEE
T ss_pred             ceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEE
Confidence            45567899999999999984     237899999987643332 5789999999999999999999887543      89


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++++|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       123 ~e~~~~~~L~~~l~~~------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dik  172 (326)
T 2w1i_A          123 MEYLPYGSLRDYLQKH------KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA  172 (326)
T ss_dssp             ECCCTTCBHHHHHHHS------TTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             EECCCCCCHHHHHHhc------ccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCC
Confidence            9999999999999764      2347889999999999999999999999999985

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.77  E-value=1.2e-18  Score=122.49  Aligned_cols=116  Identities=22%  Similarity=0.262  Sum_probs=95.3

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---------------------------ChHHHHHHHHHHcCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---------------------------NGEEFINEVACISGTS   83 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---------------------------~~~~~~~e~~~l~~l~   83 (156)
                      +.+.+.||+|+||.||++.... +..||+|.+.....                           ..+.+.+|+.++..++
T Consensus        15 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   94 (298)
T 2zv2_A           15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLD   94 (298)
T ss_dssp             EEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCC
T ss_pred             eEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCC
Confidence            4556789999999999998765 88999999865321                           1245889999999999


Q ss_pred             CCCccccceeeecc------eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           84 HVNIVTPLGICCEG------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        84 ~~~i~~l~~~~~~~------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+|++++.+.+...      +++||+++++|.+++.        ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        95 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk  164 (298)
T 2zv2_A           95 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT--------LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIK  164 (298)
T ss_dssp             CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC--------SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh--------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence            99999999998752      8999999999987653        3348899999999999999999999999999985

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.77  E-value=1e-18  Score=124.97  Aligned_cols=130  Identities=25%  Similarity=0.366  Sum_probs=102.0

Q ss_pred             HHHhhhhhhhhccccccCceEEEEEeC------CCcEEEEEecccCCC--ChHHHHHHHHHHcCC-CCCCccccceeeec
Q 047548           26 DVKKMTNSFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMG--NGEEFINEVACISGT-SHVNIVTPLGICCE   96 (156)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~   96 (156)
                      ++......+.+.||+|+||.||++...      .+..||+|.+.....  ..+.+.+|+.++..+ .|+|++++.+.+..
T Consensus        41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  120 (344)
T 1rjb_A           41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL  120 (344)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence            444455566789999999999999862      256899999875322  236789999999999 89999999999887


Q ss_pred             c----eeeecCCCCChHHHhhhcCCCC----------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           97 G----LVYEFMSNGSLHKFIYDKGSMS----------------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        97 ~----lv~e~~~~g~L~~~l~~~~~~~----------------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .    +++||+++|+|.+++.......                .....+++..+..++.|++.||.|||+++++|+||.
T Consensus       121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dik  199 (344)
T 1rjb_A          121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA  199 (344)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred             CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            6    9999999999999997643100                001236888999999999999999999999999985

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.77  E-value=5.3e-18  Score=118.67  Aligned_cols=116  Identities=22%  Similarity=0.289  Sum_probs=98.8

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc--------eee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG--------LVY  100 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~--------lv~  100 (156)
                      .+.+.||+|+||.||++.... +..+++|.+.......   +.+.+|+.++..++|+|++++++.+...        +++
T Consensus        29 ~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~  108 (290)
T 1t4h_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEE
Confidence            455689999999999998765 7889999887543222   5688999999999999999999876541        899


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA--TLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~--~~h~~i~  155 (156)
                      ||+++++|.+++...       ..++...+..++.|++.||.|||+++  ++|+||.
T Consensus       109 e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dik  158 (290)
T 1t4h_A          109 ELMTSGTLKTYLKRF-------KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLK  158 (290)
T ss_dssp             ECCCSCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCC
T ss_pred             EecCCCCHHHHHHHc-------cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCC
Confidence            999999999999763       34788999999999999999999999  9999985

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.77  E-value=4.4e-18  Score=120.71  Aligned_cols=121  Identities=22%  Similarity=0.288  Sum_probs=90.9

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      .+.+.||+|+||.||++.... +..||+|.+.....  ..+.+.+|+.++..++|+|++++.+.+...    +++||++ 
T Consensus         8 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-   86 (317)
T 2pmi_A            8 KQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-   86 (317)
T ss_dssp             -----------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-
T ss_pred             eEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-
Confidence            455789999999999998765 88999999875432  236788999999999999999999998876    9999998 


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++...... .....++...+..++.|++.||.|||+++++|+||.
T Consensus        87 ~~L~~~l~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlk  135 (317)
T 2pmi_A           87 NDLKKYMDSRTVG-NTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLK  135 (317)
T ss_dssp             CBHHHHHHHHHSS-SCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             CCHHHHHHhcccc-ccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCC
Confidence            5999998753210 012347889999999999999999999999999985

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.77  E-value=1.9e-18  Score=123.68  Aligned_cols=116  Identities=15%  Similarity=0.199  Sum_probs=99.6

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      +.+.+.||+|+||.||++.... +..||+|.+...    ......+.+|+.++..++|+|++++++++...    +++||
T Consensus        11 Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~   90 (336)
T 3h4j_B           11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY   90 (336)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEEC
Confidence            3456789999999999999754 889999998642    12235788999999999999999999998876    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      + +|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        91 ~-~g~l~~~l~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlk  135 (336)
T 3h4j_B           91 A-GGELFDYIVEK-------KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLK  135 (336)
T ss_dssp             C-CEEHHHHHHHH-------CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCS
T ss_pred             C-CCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCc
Confidence            9 67999998764       338899999999999999999999999999985

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.77  E-value=1.7e-18  Score=123.14  Aligned_cols=119  Identities=22%  Similarity=0.336  Sum_probs=100.7

Q ss_pred             hhhhhhccccccCceEEEEEe-----CCCcEEEEEecccCCCCh-HHHHHHHHHHcCCCCCCccccceeeecc------e
Q 047548           31 TNSFSDKVRQGGYGVVYRGKL-----HEGRVAAVKVLSESMGNG-EEFINEVACISGTSHVNIVTPLGICCEG------L   98 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~-----~~~~~~a~k~~~~~~~~~-~~~~~e~~~l~~l~~~~i~~l~~~~~~~------l   98 (156)
                      ...+.+.||+|+||.||++.+     ..+..||+|.+....... +.+.+|+.++..++|+|++++.+++...      +
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l  103 (327)
T 3lxl_A           24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRL  103 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEE
T ss_pred             hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEE
Confidence            345667899999999999984     237899999987643332 5689999999999999999999987632      9


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++||+++++|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       104 v~e~~~~~~L~~~l~~~------~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dik  154 (327)
T 3lxl_A          104 VMEYLPSGCLRDFLQRH------RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLA  154 (327)
T ss_dssp             EEECCTTCBHHHHHHHH------GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEeecCCCCHHHHHHhc------ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCC
Confidence            99999999999999764      2347899999999999999999999999999985

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.77  E-value=2.4e-18  Score=123.96  Aligned_cols=117  Identities=17%  Similarity=0.131  Sum_probs=100.6

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCC-CCCCccccceeeecc----eeee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ..+.+.||+|+||.||++.... +..+|+|++...    ....+.+..|..++..+ .|++++++.+.+...    ++||
T Consensus        22 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E  101 (353)
T 2i0e_A           22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME  101 (353)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEe
Confidence            3456789999999999999876 789999998753    22335678899999887 899999999998876    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       102 ~~~gg~L~~~l~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlk  148 (353)
T 2i0e_A          102 YVNGGDLMYHIQQV-------GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLK  148 (353)
T ss_dssp             CCCSCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCC
T ss_pred             CCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCC
Confidence            99999999999763       337899999999999999999999999999984

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.77  E-value=2.9e-18  Score=119.56  Aligned_cols=117  Identities=16%  Similarity=0.197  Sum_probs=101.0

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      +.+.+.||+|+||.||++.... +..+|+|.+.......   +.+.+|+.++..++|+|++++.+.+...    +++||+
T Consensus         8 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   87 (284)
T 3kk8_A            8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV   87 (284)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             hhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecC
Confidence            3456789999999999999765 8899999987543222   5678999999999999999999998876    899999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+.+...       ..++...+..++.|++.||.|||+++++|+||.
T Consensus        88 ~~~~l~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dik  132 (284)
T 3kk8_A           88 TGGELFEDIVAR-------EFYSEADASHCIQQILESIAYCHSNGIVHRNLK  132 (284)
T ss_dssp             CSCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             CCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCC
Confidence            999999988763       347889999999999999999999999999985

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.77  E-value=4.7e-18  Score=120.28  Aligned_cols=122  Identities=20%  Similarity=0.158  Sum_probs=97.1

Q ss_pred             HHhhhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCC-CCCCccccceeeecc----
Q 047548           27 VKKMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGT-SHVNIVTPLGICCEG----   97 (156)
Q Consensus        27 ~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----   97 (156)
                      +......+.+.||+|+||.||++.... +..||+|.+.......   .....|+..+..+ .|+|++++.+++...    
T Consensus        54 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~  133 (311)
T 3p1a_A           54 FFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILY  133 (311)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             hhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEE
Confidence            333444556789999999999999874 8999999876543332   2344555555444 899999999998876    


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++||+ +++|.+++...      ...+++..+..++.|++.||.|||+.+++|+||.
T Consensus       134 lv~e~~-~~~L~~~~~~~------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dik  184 (311)
T 3p1a_A          134 LQTELC-GPSLQQHCEAW------GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVK  184 (311)
T ss_dssp             EEEECC-CCBHHHHHHHH------CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             EEEecc-CCCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCC
Confidence            899999 66999988765      3458899999999999999999999999999984

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.77  E-value=3.7e-18  Score=118.70  Aligned_cols=117  Identities=18%  Similarity=0.290  Sum_probs=101.0

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.+.||+|+||.||++.... +..+|+|.+....    ...+.+.+|+.++..++|+|++++.+.+...    +++||+
T Consensus        14 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   93 (278)
T 3cok_A           14 KVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMC   93 (278)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             eeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecC
Confidence            455789999999999999754 8899999986432    1236788999999999999999999998876    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        94 ~~~~L~~~l~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~  139 (278)
T 3cok_A           94 HNGEMNRYLKNR------VKPFSENEARHFMHQIITGMLYLHSHGILHRDLT  139 (278)
T ss_dssp             TTEEHHHHHHTC------SSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCC
T ss_pred             CCCcHHHHHhhc------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            999999999764      3457899999999999999999999999999985

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.77  E-value=3.2e-18  Score=118.82  Aligned_cols=117  Identities=21%  Similarity=0.208  Sum_probs=100.9

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      ..+.+.||+|+||.||++.... +..+++|.+.....  ..+.+.+|+.++..++|+|++++.+.+...    +++||++
T Consensus         9 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (276)
T 2yex_A            9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS   88 (276)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             eEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecC
Confidence            3556789999999999999764 88999999865332  236788999999999999999999988776    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++..       ...++...+..++.|++.||.|||+++++|+||.
T Consensus        89 ~~~L~~~l~~-------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~  132 (276)
T 2yex_A           89 GGELFDRIEP-------DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK  132 (276)
T ss_dssp             TEEGGGGSBT-------TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             CCcHHHHHhh-------ccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence            9999998864       3347889999999999999999999999999985

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.77  E-value=5.2e-18  Score=118.77  Aligned_cols=115  Identities=24%  Similarity=0.278  Sum_probs=98.2

Q ss_pred             ccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCChHH
Q 047548           37 KVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHK  110 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L~~  110 (156)
                      .||+|+||.||++.... +..||+|.+...... .+.+.+|+.++..++|+|++++.+.+...    +++||+++++|.+
T Consensus        29 ~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  108 (295)
T 2clq_A           29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSA  108 (295)
T ss_dssp             EEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHH
T ss_pred             EEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHH
Confidence            79999999999999755 889999998764332 36788999999999999999999998776    9999999999999


Q ss_pred             HhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          111 FIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       111 ~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++.....    ....++..+..++.|++.||.|||+++++|+||.
T Consensus       109 ~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~  149 (295)
T 2clq_A          109 LLRSKWG----PLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK  149 (295)
T ss_dssp             HHHHTTC----CCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             HHHhhcc----CCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCC
Confidence            9976432    2345688889999999999999999999999985

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.77  E-value=2.3e-18  Score=119.95  Aligned_cols=120  Identities=22%  Similarity=0.317  Sum_probs=100.8

Q ss_pred             hhhhhhhccccccCceEEEEEeCC----CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc---eee
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG---LVY  100 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~  100 (156)
                      ....+.+.||+|+||.||++....    +..+++|.+......  .+.+.+|+.++..++|+|++++.+++...   +++
T Consensus        12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~   91 (281)
T 3cc6_A           12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIM   91 (281)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEEE
T ss_pred             cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEEE
Confidence            344566789999999999998643    346899998764322  25688999999999999999999998766   999


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++++|.+++...      ...++...+..++.|++.||.|||+++++|+||.
T Consensus        92 e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk  140 (281)
T 3cc6_A           92 ELYPYGELGHYLERN------KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIA  140 (281)
T ss_dssp             ECCTTCBHHHHHHHH------TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred             ecCCCCCHHHHHHhc------cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCc
Confidence            999999999999764      3347889999999999999999999999999985

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.77  E-value=2.7e-18  Score=121.49  Aligned_cols=122  Identities=24%  Similarity=0.254  Sum_probs=99.8

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeec----c----eee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCE----G----LVY  100 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~----~----lv~  100 (156)
                      ...+.+.||+|+||.||++.... +..||+|.+...... .+.+.+|+.++..++|+|++++++++..    .    +++
T Consensus        30 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~  109 (317)
T 2buj_A           30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLL  109 (317)
T ss_dssp             EEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEE
T ss_pred             EEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEE
Confidence            34566889999999999999754 889999988653322 3568899999999999999999998862    1    999


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++++|.+++.....   ....+++..+..++.|++.||.|||+++++|+||.
T Consensus       110 e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlk  161 (317)
T 2buj_A          110 PFFKRGTLWNEIERLKD---KGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLK  161 (317)
T ss_dssp             ECCTTCBHHHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             EeCCCCcHHHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            99999999999975311   03458899999999999999999999999999985

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.77  E-value=2.9e-18  Score=130.13  Aligned_cols=117  Identities=20%  Similarity=0.199  Sum_probs=100.7

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      +.++||+|+||.||.+.... +..+|+|.+...    ......+.+|+.++..++|+|++++.+.+...    ++|||++
T Consensus       188 ~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~  267 (576)
T 2acx_A          188 QYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMN  267 (576)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCC
Confidence            34689999999999999865 899999998642    22335688999999999999999999998876    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|+|.+++....     ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       268 gg~L~~~l~~~~-----~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLK  313 (576)
T 2acx_A          268 GGDLKFHIYHMG-----QAGFPEARAVFYAAEICCGLEDLHRERIVYRDLK  313 (576)
T ss_dssp             SCBHHHHHHSSS-----SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             CCcHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCc
Confidence            999999997642     3348899999999999999999999999999984

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.77  E-value=4.4e-18  Score=118.94  Aligned_cols=114  Identities=25%  Similarity=0.401  Sum_probs=98.4

Q ss_pred             hccccccCceEEEEEeC---CCcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc---eeeecCCCCC
Q 047548           36 DKVRQGGYGVVYRGKLH---EGRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG---LVYEFMSNGS  107 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~---~~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~~~~g~  107 (156)
                      ..||+|+||.||++...   .+..+|+|.+......  .+.+.+|+.++..++|+|++++.+.+...   +++||+++++
T Consensus        16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~   95 (287)
T 1u59_A           16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGP   95 (287)
T ss_dssp             EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEE
T ss_pred             ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEEEEeCCCCC
Confidence            38999999999999864   3778999999864322  25688999999999999999999998655   9999999999


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        96 L~~~l~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  137 (287)
T 1u59_A           96 LHKFLVGK------REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLA  137 (287)
T ss_dssp             HHHHHTTC------TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             HHHHHHhC------CccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCc
Confidence            99999754      3458899999999999999999999999999985

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.77  E-value=2.3e-18  Score=123.96  Aligned_cols=119  Identities=20%  Similarity=0.274  Sum_probs=101.9

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ....+.+.||+|+||.||++.... +..+|+|.+.......  +.+.+|+.++..++|+|++++.+.+...    +++||
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  112 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH  112 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence            344556789999999999999875 8899999987643222  5688999999999999999999988776    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV-ATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~-~~~h~~i~  155 (156)
                      +++++|.+++...       ..+++..+..++.|++.||.|||+. +++|+||.
T Consensus       113 ~~~~~L~~~l~~~-------~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlk  159 (360)
T 3eqc_A          113 MDGGSLDQVLKKA-------GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK  159 (360)
T ss_dssp             CTTCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCS
T ss_pred             CCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCcc
Confidence            9999999999764       3378899999999999999999996 89999985

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.77  E-value=4.8e-18  Score=122.09  Aligned_cols=116  Identities=22%  Similarity=0.303  Sum_probs=98.2

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh----HHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG----EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~----~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      ...+.||+|+||.||++.... +..||+|.+.......    +.+.+|+.++..++|+|++++.+++...    +++||+
T Consensus        57 ~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~  136 (348)
T 1u5q_A           57 SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC  136 (348)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             eeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecC
Confidence            344679999999999998754 8899999987543222    4688999999999999999999998776    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      . |++.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       137 ~-g~l~~~l~~~------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  181 (348)
T 1u5q_A          137 L-GSASDLLEVH------KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVK  181 (348)
T ss_dssp             S-EEHHHHHHHH------TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCS
T ss_pred             C-CCHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCC
Confidence            7 5888888654      3458899999999999999999999999999985

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.77  E-value=2.6e-18  Score=119.01  Aligned_cols=115  Identities=27%  Similarity=0.394  Sum_probs=96.7

Q ss_pred             hhhhhccccccCceEEEEEeCCCcEEEEEecccCCC-----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMG-----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ..+.+.||+|+||.||++... +..+|+|.+.....     ..+.+.+|+.++..++|+|++++.+.+...    +++||
T Consensus         9 ~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (271)
T 3dtc_A            9 LTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEF   87 (271)
T ss_dssp             EEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEEC
T ss_pred             eeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEc
Confidence            445678999999999999875 78899999875322     125688999999999999999999998876    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC---CCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA---TLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~---~~h~~i~  155 (156)
                      +++++|.+++..        ..+++..+..++.|++.||.|||+++   +.|+||.
T Consensus        88 ~~~~~L~~~~~~--------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dik  135 (271)
T 3dtc_A           88 ARGGPLNRVLSG--------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLK  135 (271)
T ss_dssp             CTTEEHHHHHTS--------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCS
T ss_pred             CCCCCHHHHhhc--------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCc
Confidence            999999999863        34788999999999999999999999   7899985

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.77  E-value=4.8e-18  Score=121.07  Aligned_cols=118  Identities=21%  Similarity=0.381  Sum_probs=99.5

Q ss_pred             hhhhhccccccCceEEEEEeCC-Cc----EEEEEecccCC--CChHHHHHHHHHHcCCCCCCccccceeeecc---eeee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GR----VAAVKVLSESM--GNGEEFINEVACISGTSHVNIVTPLGICCEG---LVYE  101 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~----~~a~k~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e  101 (156)
                      ..+.+.||+|+||.||++.... +.    ++++|.+....  ...+.+.+|+.++..++|+|++++++++...   ++++
T Consensus        17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~v~~   96 (327)
T 3lzb_A           17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQ   96 (327)
T ss_dssp             EEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEEEEC
T ss_pred             ceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceEEEE
Confidence            4456789999999999998754 33    45777775432  2336789999999999999999999998877   8999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|+|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        97 ~~~~g~L~~~l~~~------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dik  144 (327)
T 3lzb_A           97 LMPFGCLLDYVREH------KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA  144 (327)
T ss_dssp             CCSSCBHHHHHHHT------TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             ecCCCcHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCC
Confidence            99999999999865      3448889999999999999999999999999985

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.77  E-value=1.7e-18  Score=122.95  Aligned_cols=118  Identities=30%  Similarity=0.420  Sum_probs=101.9

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCC-CCCCccccceeeec------c----eee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGT-SHVNIVTPLGICCE------G----LVY  100 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~------~----lv~  100 (156)
                      .+.+.||+|+||.||++.... +..||+|.+.........+.+|+.++..+ .|+|++++.+.+..      .    +++
T Consensus        27 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~  106 (326)
T 2x7f_A           27 ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVM  106 (326)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEE
T ss_pred             EEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEE
Confidence            455789999999999999854 88999999876655567889999999988 89999999998864      1    999


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++++|.+++....     ...++...+..++.|++.||.|||+++++|+||.
T Consensus       107 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlk  156 (326)
T 2x7f_A          107 EFCGAGSVTDLIKNTK-----GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIK  156 (326)
T ss_dssp             ECCTTEEHHHHHHHSG-----GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred             EcCCCCcHHHHHHhcc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCc
Confidence            9999999999997642     3457889999999999999999999999999985

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.76  E-value=1.9e-18  Score=121.38  Aligned_cols=126  Identities=21%  Similarity=0.232  Sum_probs=88.9

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ....+.+.||+|+||.||++.... +..||+|.+.....  ..+.+.+|+.++..++|+|++++++.+...    +++||
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   94 (303)
T 2vwi_A           15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKL   94 (303)
T ss_dssp             CCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEEC
T ss_pred             hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehh
Confidence            344566899999999999998654 88999999875322  235688999999999999999999988776    99999


Q ss_pred             CCCCChHHHhhhcCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGS-MSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++..... .......+++..+..++.|++.||.|||+++++|+||.
T Consensus        95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~  148 (303)
T 2vwi_A           95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVK  148 (303)
T ss_dssp             CTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred             ccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999874110 00013447899999999999999999999999999985

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.76  E-value=1e-17  Score=117.12  Aligned_cols=119  Identities=19%  Similarity=0.249  Sum_probs=102.7

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCC---CChHHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM---GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ....+.+.||+|+||.||++.... +..+++|.+....   ...+.+.+|+.++..++|+|++++.+.+...    +++|
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  101 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence            445667899999999999999864 8899999986532   2346788999999999999999999998776    8999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++++|.+++...       ..++...+..++.|++.||.|||+++++|+||.
T Consensus       102 ~~~~~~L~~~l~~~-------~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~  148 (287)
T 2wei_A          102 LYTGGELFDEIIKR-------KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLK  148 (287)
T ss_dssp             CCCSCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             ccCCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence            99999999988753       337889999999999999999999999999985

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.76  E-value=1.2e-18  Score=123.95  Aligned_cols=117  Identities=22%  Similarity=0.334  Sum_probs=97.1

Q ss_pred             hhhhccccccCceEEEEEeCC-Cc----EEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc---eeeec
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GR----VAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG---LVYEF  102 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~----~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~  102 (156)
                      .+.+.||+|+||.||++.... +.    .+++|.+.....  ..+.+.+|+.++..++|+|++++++++...   +++||
T Consensus        16 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~   95 (325)
T 3kex_A           16 RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQY   95 (325)
T ss_dssp             EEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEEEEEC
T ss_pred             eeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEEEEEe
Confidence            455789999999999998754 33    478887754322  225677899999999999999999988765   99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        96 ~~~~~L~~~l~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dik  142 (325)
T 3kex_A           96 LPLGSLLDHVRQH------RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLA  142 (325)
T ss_dssp             CTTCBSHHHHHSS------GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             CCCCCHHHHHHHc------cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccc
Confidence            9999999999754      2347888999999999999999999999999985

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.76  E-value=4.7e-18  Score=120.47  Aligned_cols=130  Identities=21%  Similarity=0.363  Sum_probs=103.5

Q ss_pred             HHHhhhhhhhhccccccCceEEEEEeC------CCcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc
Q 047548           26 DVKKMTNSFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG   97 (156)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~   97 (156)
                      ++......+.+.||+|+||.||++...      .+..+|+|.+.......  ..+.+|+.++..+.|+|++++.+.+...
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~  100 (322)
T 1p4o_A           21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG  100 (322)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred             cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence            344445566789999999999999764      26789999987543322  4688999999999999999999998776


Q ss_pred             ----eeeecCCCCChHHHhhhcCCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 ----LVYEFMSNGSLHKFIYDKGSM---STKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 ----lv~e~~~~g~L~~~l~~~~~~---~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                          +++||+++++|.+++......   ......++...+..++.|++.||.|||+++++|+||.
T Consensus       101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dik  165 (322)
T 1p4o_A          101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLA  165 (322)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCS
T ss_pred             CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCc
Confidence                999999999999999753100   0001346789999999999999999999999999985

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.76  E-value=2.7e-18  Score=124.46  Aligned_cols=118  Identities=15%  Similarity=0.161  Sum_probs=92.9

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHH-HcCCCCCCccccceeeecc----eee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVAC-ISGTSHVNIVTPLGICCEG----LVY  100 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~-l~~l~~~~i~~l~~~~~~~----lv~  100 (156)
                      ...+.+.||+|+||.||++..+. +..+|+|++.....    ....+..|..+ +..++|+|++++.+.+...    ++|
T Consensus        39 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~  118 (373)
T 2r5t_A           39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVL  118 (373)
T ss_dssp             GEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             heEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEE
Confidence            34556799999999999999876 88999999975322    22345666665 4678999999999998876    999


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       119 E~~~gg~L~~~l~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlk  166 (373)
T 2r5t_A          119 DYINGGELFYHLQRE-------RCFLEPRARFYAAEIASALGYLHSLNIVYRDLK  166 (373)
T ss_dssp             ECCCSCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             eCCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence            999999999999763       347888999999999999999999999999984

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.76  E-value=5.5e-18  Score=118.79  Aligned_cols=117  Identities=15%  Similarity=0.148  Sum_probs=100.7

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      +.+.+.||+|+||.||++.... +..+++|.+.....    ..+.+.+|+.++..+.|+|++++.+.+...    +++||
T Consensus        17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   96 (294)
T 2rku_A           17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL   96 (294)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEec
Confidence            3456789999999999999876 78899998865321    125688899999999999999999998876    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        97 ~~~~~L~~~~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~  142 (294)
T 2rku_A           97 CRRRSLLELHKRR-------KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK  142 (294)
T ss_dssp             CTTCBHHHHHHHH-------CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             CCCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence            9999999998763       347889999999999999999999999999985

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.76  E-value=3.6e-18  Score=122.51  Aligned_cols=115  Identities=21%  Similarity=0.261  Sum_probs=97.4

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCC
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .+.+.+.||+|+||.||++..+. +..+|+|++.....   ...+|+.++..+ .|+|++++.+.+...    ++|||++
T Consensus        23 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~   99 (342)
T 2qr7_A           23 GYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMK   99 (342)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             cEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCC
Confidence            34556789999999999999865 88999999875432   234577777766 799999999998876    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|+|.+.+...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       100 gg~L~~~i~~~-------~~~~~~~~~~~~~qi~~al~~lH~~givHrDlk  143 (342)
T 2qr7_A          100 GGELLDKILRQ-------KFFSEREASAVLFTITKTVEYLHAQGVVHRDLK  143 (342)
T ss_dssp             SCBHHHHHHTC-------TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             CCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCC
Confidence            99999999753       348899999999999999999999999999984

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.76  E-value=3.9e-18  Score=120.38  Aligned_cols=116  Identities=19%  Similarity=0.288  Sum_probs=99.7

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .+.+.||+|+||.||++.... +..+|+|.+.......   +.+.+|+.++..++|+|++++.+.+...    +++||++
T Consensus         6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (311)
T 4agu_A            6 EKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCD   85 (311)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             eEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCC
Confidence            455789999999999999866 8899999886644332   4578899999999999999999998876    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++..       ...++...+..++.|++.||.|||+++++|+||.
T Consensus        86 ~~~l~~~~~~-------~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlk  129 (311)
T 4agu_A           86 HTVLHELDRY-------QRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVK  129 (311)
T ss_dssp             EEHHHHHHHT-------SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CchHHHHHhh-------hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCC
Confidence            9999888765       3347889999999999999999999999999985

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.76  E-value=2.1e-18  Score=127.61  Aligned_cols=117  Identities=15%  Similarity=0.135  Sum_probs=92.7

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ..+.+.||+|+||.||++.... +..||+|.+...    ......+.+|+.++..++|+|++++.+.+...    ++|||
T Consensus       150 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~  229 (446)
T 4ejn_A          150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY  229 (446)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECC
T ss_pred             cEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEee
Confidence            3445789999999999999765 889999998752    11225677899999999999999999998876    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA-VATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~-~~~~h~~i~  155 (156)
                      +++|+|.+++...       ..+++..+..++.|++.||.|||+ .+++|+||.
T Consensus       230 ~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlk  276 (446)
T 4ejn_A          230 ANGGELFFHLSRE-------RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLK  276 (446)
T ss_dssp             CSSCBHHHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCC
T ss_pred             CCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCC
Confidence            9999999999763       347899999999999999999998 899999984

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.76  E-value=6e-18  Score=119.04  Aligned_cols=116  Identities=19%  Similarity=0.342  Sum_probs=100.8

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      ..+.+.||+|+||.||++.... +..+|+|.+.....  ..+.+.+|+.++..+.|+|++++.+.+...    +++||++
T Consensus        24 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  103 (303)
T 3a7i_A           24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG  103 (303)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             HHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCC
Confidence            4556789999999999998755 88999999875432  336789999999999999999999988776    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++..        ..++...+..++.|++.||.|||+.+++|+||.
T Consensus       104 ~~~L~~~~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~  146 (303)
T 3a7i_A          104 GGSALDLLEP--------GPLDETQIATILREILKGLDYLHSEKKIHRDIK  146 (303)
T ss_dssp             TEEHHHHHTT--------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CCcHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Confidence            9999999863        347899999999999999999999999999985

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.76  E-value=4.1e-18  Score=120.98  Aligned_cols=118  Identities=17%  Similarity=0.161  Sum_probs=99.3

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---------ChHHHHHHHHHHcCCCCCCccccceeeecc---
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---------NGEEFINEVACISGTSHVNIVTPLGICCEG---   97 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---------~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---   97 (156)
                      .+.+.+.||+|+||.||++.... +..||+|.+.....         ....+.+|+.++..+.|+|++++.+++...   
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   90 (322)
T 2ycf_A           11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYY   90 (322)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSSEE
T ss_pred             ceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCceE
Confidence            44566899999999999999765 88999999865321         113578999999999999999999988766   


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++||+++++|.+++..       ...++...+..++.|++.||.|||+++++|+||.
T Consensus        91 lv~e~~~~~~L~~~~~~-------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlk  141 (322)
T 2ycf_A           91 IVLELMEGGELFDKVVG-------NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLK  141 (322)
T ss_dssp             EEEECCTTEETHHHHST-------TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             EEEecCCCCcHHHHHhc-------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence            99999999999998865       3447889999999999999999999999999985

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.76  E-value=3.5e-18  Score=123.31  Aligned_cols=119  Identities=14%  Similarity=0.073  Sum_probs=96.3

Q ss_pred             hhhhccccccCceEEEEE------eCCCcEEEEEecccCCCChHHHHHHHHHHcCCC---CCCccccceeeecc----ee
Q 047548           33 SFSDKVRQGGYGVVYRGK------LHEGRVAAVKVLSESMGNGEEFINEVACISGTS---HVNIVTPLGICCEG----LV   99 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~------~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~l~~~~~~~----lv   99 (156)
                      .+.+.||+|+||.||++.      ...+..||+|.+...  ....+..|..++..+.   |++++.+.+.+...    ++
T Consensus        68 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv  145 (365)
T 3e7e_A           68 YVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLV  145 (365)
T ss_dssp             EEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEE
T ss_pred             EEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEE
Confidence            445689999999999994      234889999998753  3456777777777775   89999999988775    99


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |||+++|+|.+++......  ....+++..+..++.|++.||.|||+.+++|+||.
T Consensus       146 ~e~~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiK  199 (365)
T 3e7e_A          146 GELYSYGTLLNAINLYKNT--PEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIK  199 (365)
T ss_dssp             ECCCCSCBHHHHHHHHHTS--TTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCS
T ss_pred             EeccCCCcHHHHHHHhhcc--cccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCC
Confidence            9999999999999752210  03458899999999999999999999999999984

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.76  E-value=5.2e-18  Score=119.88  Aligned_cols=118  Identities=24%  Similarity=0.387  Sum_probs=98.4

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      ...+.+.||+|+||.||++.... +..+|+|.+.... ..+.+.+|+.++..+.|+|++++.+.+...    +++||+++
T Consensus        30 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (314)
T 3com_A           30 VFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGA  108 (314)
T ss_dssp             CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             hhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCC
Confidence            34556789999999999999865 8899999987532 346789999999999999999999988766    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++...      ...++...+..++.|++.||.|||+.+++|+||.
T Consensus       109 ~~L~~~~~~~------~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~  152 (314)
T 3com_A          109 GSVSDIIRLR------NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIK  152 (314)
T ss_dssp             EEHHHHHHHH------TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcC
Confidence            9999999743      3458899999999999999999999999999985

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.76  E-value=6.5e-18  Score=119.38  Aligned_cols=117  Identities=16%  Similarity=0.194  Sum_probs=101.1

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh----HHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG----EEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~----~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      +.+.+.||+|+||.||++.... +..+|+|.+.......    +.+.+|+.++..++|+|++++.+++...    +++||
T Consensus        36 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  115 (309)
T 2h34_A           36 YRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRL  115 (309)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             EEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEe
Confidence            3456789999999999999764 8899999987543221    5688999999999999999999988776    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       116 ~~~~~L~~~l~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlk  161 (309)
T 2h34_A          116 INGVDLAAMLRRQ-------GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVK  161 (309)
T ss_dssp             CCCEEHHHHHHHH-------CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             cCCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCC
Confidence            9999999999763       347889999999999999999999999999985

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.76  E-value=5.8e-18  Score=120.93  Aligned_cols=117  Identities=15%  Similarity=0.148  Sum_probs=100.8

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      +.+.+.||+|+||.||++.... +..+++|.+.....    ..+.+.+|+.++..+.|+|++++.+++...    +++||
T Consensus        43 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  122 (335)
T 2owb_A           43 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL  122 (335)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEec
Confidence            3456789999999999999866 78899999865321    125688999999999999999999998876    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       123 ~~~~~L~~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlk  168 (335)
T 2owb_A          123 CRRRSLLELHKRR-------KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK  168 (335)
T ss_dssp             CTTCBHHHHHHHH-------CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             CCCCCHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCC
Confidence            9999999998763       347889999999999999999999999999985

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.76  E-value=2.9e-18  Score=122.13  Aligned_cols=116  Identities=16%  Similarity=0.109  Sum_probs=98.7

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      ..+.+.||+|+||.||++.... +..||+|.+.... ..+.+.+|+.++..+ +|+|++++.+.+...    +++||+ +
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~   88 (330)
T 2izr_A           11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-G   88 (330)
T ss_dssp             EEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-C
T ss_pred             eEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-C
Confidence            3456789999999999999754 8899999986532 234688999999999 999999999988776    999999 8


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        89 ~~L~~~~~~~------~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlk  132 (330)
T 2izr_A           89 PSLEDLFDLC------DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVK  132 (330)
T ss_dssp             CBHHHHHHHT------TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             CCHHHHHHHc------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence            9999999764      3458899999999999999999999999999984

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.76  E-value=3.7e-18  Score=119.55  Aligned_cols=117  Identities=23%  Similarity=0.408  Sum_probs=97.3

Q ss_pred             hhhhh-ccccccCceEEEEEeC--C-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc---eeee
Q 047548           32 NSFSD-KVRQGGYGVVYRGKLH--E-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG---LVYE  101 (156)
Q Consensus        32 ~~~~~-~lg~g~~g~v~~~~~~--~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e  101 (156)
                      ..+.+ .||+|+||.||++.+.  . +..+|+|.+......   .+.+.+|+.++..++|+|++++.+.+...   +++|
T Consensus        18 y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e   97 (291)
T 1xbb_A           18 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVME   97 (291)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEE
T ss_pred             hhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEEEEE
Confidence            34445 8999999999999653  2 678999998764322   25688999999999999999999998655   9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++++|.+++...       ..++...+..++.|++.||.|||+++++|+||.
T Consensus        98 ~~~~~~L~~~l~~~-------~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dik  144 (291)
T 1xbb_A           98 MAELGPLNKYLQQN-------RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLA  144 (291)
T ss_dssp             CCTTEEHHHHHHHC-------TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             eCCCCCHHHHHHhC-------cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCC
Confidence            99999999999763       347889999999999999999999999999985

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.76  E-value=8.5e-18  Score=116.71  Aligned_cols=118  Identities=18%  Similarity=0.258  Sum_probs=101.5

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ...+.+.||+|+||.||.+.... +..+++|.+....    ...+.+.+|+.++..++|+|++++.+.+...    +++|
T Consensus        12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   91 (276)
T 2h6d_A           12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVME   91 (276)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEe
Confidence            34556789999999999999864 8899999986432    2235788999999999999999999998776    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++++|.+++...       ..++...+..++.|++.||.|||+++++|+||.
T Consensus        92 ~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~  138 (276)
T 2h6d_A           92 YVSGGELFDYICKH-------GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLK  138 (276)
T ss_dssp             CCCSCBHHHHHHHH-------CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCC
T ss_pred             ccCCCcHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Confidence            99999999999764       237889999999999999999999999999985

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.76  E-value=5.4e-18  Score=125.73  Aligned_cols=116  Identities=17%  Similarity=0.248  Sum_probs=90.1

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc---------e
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG---------L   98 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~---------l   98 (156)
                      +.+.+.||+|+||.||++.... +..||+|.+.......   +.+.+|+.++..++|+||+++++++...         +
T Consensus        55 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l  134 (458)
T 3rp9_A           55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYV  134 (458)
T ss_dssp             EEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEE
T ss_pred             eEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEE
Confidence            4556789999999999998765 8899999987543332   5688999999999999999999987421         8


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|++ +++|.+++..       ...+++..+..++.|++.||.|||+.+++|+||.
T Consensus       135 v~e~~-~~~L~~~~~~-------~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlK  183 (458)
T 3rp9_A          135 VLEIA-DSDFKKLFRT-------PVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLK  183 (458)
T ss_dssp             EECCC-SEEHHHHHHS-------SCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCC
T ss_pred             EEecc-ccchhhhccc-------CCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCC
Confidence            99987 5699999875       3348899999999999999999999999999984

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.76  E-value=7.7e-18  Score=119.46  Aligned_cols=115  Identities=21%  Similarity=0.314  Sum_probs=98.9

Q ss_pred             hhhhccccccCceEEEEEeC-----CCcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc------ee
Q 047548           33 SFSDKVRQGGYGVVYRGKLH-----EGRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG------LV   99 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~-----~~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv   99 (156)
                      .+.+.||+|+||.||.+.+.     .+..||+|.+......  .+.+.+|+.++..++|+|++++.+++...      ++
T Consensus        34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv  113 (318)
T 3lxp_A           34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV  113 (318)
T ss_dssp             EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred             hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence            45678999999999988753     3788999999764322  25689999999999999999999998763      89


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+++++|.+++...        .+++..+..++.|++.||.|||+.+++|+||.
T Consensus       114 ~e~~~~~~L~~~l~~~--------~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dik  161 (318)
T 3lxp_A          114 MEYVPLGSLRDYLPRH--------SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLA  161 (318)
T ss_dssp             ECCCTTCBHHHHGGGS--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EecccCCcHHHHHhhC--------CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCc
Confidence            9999999999999753        37889999999999999999999999999985

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.76  E-value=5.2e-18  Score=117.94  Aligned_cols=121  Identities=17%  Similarity=0.191  Sum_probs=99.9

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc------eeee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG------LVYE  101 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv~e  101 (156)
                      ..+.+.||+|+||.||++.... +..+++|.+.......   +.+.+|+.++..++|+|++++.+.+...      +++|
T Consensus         8 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e   87 (279)
T 2w5a_A            8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME   87 (279)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEE
T ss_pred             eeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEe
Confidence            3456789999999999999865 8899999987543322   5688999999999999999999977432      9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA-----TLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~-----~~h~~i~  155 (156)
                      |+++++|.+++.....   ....+++..+..++.|++.||.|||+.+     ++|+||.
T Consensus        88 ~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~  143 (279)
T 2w5a_A           88 YCEGGDLASVITKGTK---ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK  143 (279)
T ss_dssp             CCTTEEHHHHHHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCS
T ss_pred             CCCCCCHHHHHHhhcc---cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccc
Confidence            9999999999975321   0344889999999999999999999999     9999985

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.76  E-value=8.5e-18  Score=119.70  Aligned_cols=122  Identities=21%  Similarity=0.309  Sum_probs=97.7

Q ss_pred             ChHHHHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCC--CCCCccccceeeecc---
Q 047548           23 NYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGT--SHVNIVTPLGICCEG---   97 (156)
Q Consensus        23 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l--~~~~i~~l~~~~~~~---   97 (156)
                      ...........+.+.||+|+||.||++... +..||+|.+...  .......|..++...  +|+|++++++.+...   
T Consensus        30 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~  106 (337)
T 3mdy_A           30 LVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT--EEASWFRETEIYQTVLMRHENILGFIAADIKGTGS  106 (337)
T ss_dssp             HHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG--GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred             ccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc--ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence            334444445566789999999999999876 889999998643  233445555655554  899999999887643   


Q ss_pred             -----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc--------CCCCcccc
Q 047548           98 -----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV--------ATLGLCIS  155 (156)
Q Consensus        98 -----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~--------~~~h~~i~  155 (156)
                           +++||+++|+|.+++...        .+++..+..++.|++.||.|||+.        +++|+||.
T Consensus       107 ~~~~~lv~e~~~~g~L~~~l~~~--------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dik  169 (337)
T 3mdy_A          107 WTQLYLITDYHENGSLYDYLKST--------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLK  169 (337)
T ss_dssp             GCEEEEEECCCTTCBHHHHHHHC--------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCC
T ss_pred             CCceEEEEeccCCCcHHHHhhcc--------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccc
Confidence                 899999999999999753        378899999999999999999999        99999984

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.76  E-value=5.6e-18  Score=120.21  Aligned_cols=126  Identities=24%  Similarity=0.402  Sum_probs=96.3

Q ss_pred             hhhhhhhhccccccCceEEEEEeCC-C---cEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----
Q 047548           29 KMTNSFSDKVRQGGYGVVYRGKLHE-G---RVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----   97 (156)
Q Consensus        29 ~~~~~~~~~lg~g~~g~v~~~~~~~-~---~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----   97 (156)
                      .....+.+.||+|+||.||++.... +   ..||+|.+.....   ..+.+.+|+.++..++|+|++++++++...    
T Consensus        22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  101 (323)
T 3qup_A           22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG  101 (323)
T ss_dssp             ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred             hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence            3445566899999999999998654 3   3799999876422   226789999999999999999999987653    


Q ss_pred             ------eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 ------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 ------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                            +++||+++++|.+++...... .....+++..+..++.|++.||.|||+++++|+||.
T Consensus       102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dik  164 (323)
T 3qup_A          102 RLPIPMVILPFMKHGDLHAFLLASRIG-ENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLA  164 (323)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHHHC----CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             CCCccEEEEEeccCCcHHHHHHhhhcc-ccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCC
Confidence                  789999999999999653210 002247889999999999999999999999999985

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.76  E-value=2.9e-18  Score=119.34  Aligned_cols=117  Identities=19%  Similarity=0.264  Sum_probs=100.4

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ..+.+.||+|+||.||++.... +..+|+|.+....    .....+.+|+.++..++|+|++++.+++...    +++||
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   90 (279)
T 3fdn_A           11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY   90 (279)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             EEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEec
Confidence            3455789999999999998766 7789999986422    1235688999999999999999999998876    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++...       ..++...+..++.|++.||.|||+.+++|+||.
T Consensus        91 ~~~~~l~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlk  136 (279)
T 3fdn_A           91 APLGTVYRELQKL-------SKFDEQRTATYITELANALSYCHSKRVIHRDIK  136 (279)
T ss_dssp             CTTEEHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCC
T ss_pred             CCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCC
Confidence            9999999999764       337889999999999999999999999999985

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.76  E-value=7.4e-18  Score=127.30  Aligned_cols=117  Identities=19%  Similarity=0.223  Sum_probs=100.0

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      ++||+|+||.||++.... +..+|+|.+....    ...+.+.+|..++..++|+|++++.+.+...    ++|||+++|
T Consensus       191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg  270 (543)
T 3c4z_A          191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGG  270 (543)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred             EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCC
Confidence            579999999999999865 8999999986432    2335688999999999999999999988776    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++.....   ....+++..+..++.|++.||.|||+++++|+||.
T Consensus       271 ~L~~~l~~~~~---~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLK  316 (543)
T 3c4z_A          271 DIRYHIYNVDE---DNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLK  316 (543)
T ss_dssp             BHHHHHHTSST---TSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             CHHHHHHHhhc---ccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Confidence            99999875421   03458899999999999999999999999999984

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.76  E-value=1.1e-17  Score=118.02  Aligned_cols=121  Identities=19%  Similarity=0.230  Sum_probs=99.1

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC-C---hHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-N---GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ..+.+.||+|+||.||++.... +..+|+|.+..... .   ...+.+|+.++..++|+|++++.+.+...    +++||
T Consensus        34 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  113 (310)
T 2wqm_A           34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLEL  113 (310)
T ss_dssp             EEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEec
Confidence            4556789999999999998754 88999999875322 1   25688999999999999999999988776    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++.....   ....++...+..++.|++.||.|||+.+++|+||.
T Consensus       114 ~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~  163 (310)
T 2wqm_A          114 ADAGDLSRMIKHFKK---QKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIK  163 (310)
T ss_dssp             CCSCBHHHHHHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCCHHHHHHHhcc---cccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCc
Confidence            999999999874210   03457889999999999999999999999999985

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.75  E-value=8.4e-18  Score=117.03  Aligned_cols=118  Identities=21%  Similarity=0.342  Sum_probs=99.7

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeec------------
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCE------------   96 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~------------   96 (156)
                      ....+.+.||+|+||.||++.... +..+++|.+....   ..+.+|+.++..++|+|++++.+.+..            
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~   87 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNS   87 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--------
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccc
Confidence            344556789999999999999864 8899999986532   456789999999999999999987643            


Q ss_pred             ----c----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           97 ----G----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        97 ----~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                          .    +++||+++++|.+++....     ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlk  149 (284)
T 2a19_B           88 SRSKTKCLFIQMEFCDKGTLEQWIEKRR-----GEKLDKVLALELFEQITKGVDYIHSKKLINRDLK  149 (284)
T ss_dssp             -CCEEEEEEEEECCCCSCBHHHHHHHGG-----GSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             cccCcceEEEEEeccCCCCHHHHHhhcc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence                1    8999999999999997542     3457889999999999999999999999999985

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.75  E-value=8.1e-18  Score=129.78  Aligned_cols=119  Identities=19%  Similarity=0.305  Sum_probs=100.5

Q ss_pred             hhhhhhccccccCceEEEEEeCC----CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc---eeee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG---LVYE  101 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e  101 (156)
                      ...+.+.||+|+||.||++....    +..+|+|.+.......  +.+.+|+.++..++|+|++++++++...   +++|
T Consensus       391 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~lv~E  470 (656)
T 2j0j_A          391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIME  470 (656)
T ss_dssp             GEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEE
T ss_pred             cEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceEEEEE
Confidence            34456789999999999998743    4578999887543322  5688999999999999999999998665   9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++|+|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       471 ~~~~g~L~~~l~~~------~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDik  518 (656)
T 2j0j_A          471 LCTLGELRSFLQVR------KFSLDLASLILYAYQLSTALAYLESKRFVHRDIA  518 (656)
T ss_dssp             CCTTCBHHHHHHHT------TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             cCCCCcHHHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccc
Confidence            99999999999764      3347889999999999999999999999999984

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.75  E-value=2.4e-18  Score=121.51  Aligned_cols=130  Identities=22%  Similarity=0.346  Sum_probs=102.7

Q ss_pred             HHHhhhhhhhhccccccCceEEEEEeC------CCcEEEEEecccCCCCh--HHHHHHHHHHcCC-CCCCccccceeeec
Q 047548           26 DVKKMTNSFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMGNG--EEFINEVACISGT-SHVNIVTPLGICCE   96 (156)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l-~~~~i~~l~~~~~~   96 (156)
                      ++......+.+.||+|+||.||++...      .+..||+|.+.......  +.+.+|+.++..+ +|+|++++.+.+..
T Consensus        23 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  102 (316)
T 2xir_A           23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK  102 (316)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred             ecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEec
Confidence            334445566789999999999999842      26789999987643322  4688999999999 78999999998776


Q ss_pred             c-----eeeecCCCCChHHHhhhcCCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           97 G-----LVYEFMSNGSLHKFIYDKGSMS---------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        97 ~-----lv~e~~~~g~L~~~l~~~~~~~---------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .     +++||+++++|.+++.......         .....+++..+..++.|++.||.|||+++++|+||.
T Consensus       103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dik  175 (316)
T 2xir_A          103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA  175 (316)
T ss_dssp             TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCc
Confidence            4     8999999999999997643100         001126788999999999999999999999999985

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.75  E-value=4.7e-18  Score=118.60  Aligned_cols=118  Identities=21%  Similarity=0.259  Sum_probs=101.2

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ...+.+.||+|+||.||.+.... +..+|+|.+....    .....+.+|+.++..++|+|++++.+.+...    +++|
T Consensus        15 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   94 (284)
T 2vgo_A           15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLE   94 (284)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEE
Confidence            34556789999999999999765 7889999986421    2235688999999999999999999998876    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++++|.+++...       ..++...+..++.|++.||.|||+++++|+||.
T Consensus        95 ~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~  141 (284)
T 2vgo_A           95 FAPRGELYKELQKH-------GRFDEQRSATFMEELADALHYCHERKVIHRDIK  141 (284)
T ss_dssp             CCTTEEHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCS
T ss_pred             eCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence            99999999999764       337889999999999999999999999999985

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.75  E-value=1.1e-17  Score=119.26  Aligned_cols=117  Identities=22%  Similarity=0.363  Sum_probs=99.7

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      +.+.+.||+|+||.||++.... +..||+|.+.......   +.+.+|+.++..++|+|++++.+++...    +++||+
T Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  106 (331)
T 4aaa_A           27 YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV  106 (331)
T ss_dssp             EEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             heeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecC
Confidence            3445789999999999999866 8899999886544333   4577899999999999999999998876    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++|.+++..       ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       107 ~~~~l~~~~~~-------~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlk  151 (331)
T 4aaa_A          107 DHTILDDLELF-------PNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIK  151 (331)
T ss_dssp             SEEHHHHHHHS-------TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             CcchHHHHHhh-------ccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcC
Confidence            99888887654       2347899999999999999999999999999985

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.75  E-value=1.8e-17  Score=117.05  Aligned_cols=125  Identities=28%  Similarity=0.450  Sum_probs=97.9

Q ss_pred             hhhhhhhccccccCceEEEEEeCC----CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc-----
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG-----   97 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----   97 (156)
                      ....+.+.||+|+||.||++....    +..+|+|.+.......   +.+.+|+.++..++|+|++++.+++...     
T Consensus        34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~  113 (313)
T 3brb_A           34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI  113 (313)
T ss_dssp             GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred             HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence            344556789999999999998643    4579999987543332   5688999999999999999999987652     


Q ss_pred             ----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 ----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 ----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                          +++||+++++|.+++...... .....+++..++.++.|++.||.|||+++++|+||.
T Consensus       114 ~~~~~v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dik  174 (313)
T 3brb_A          114 PKPMVILPFMKYGDLHTYLLYSRLE-TGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLA  174 (313)
T ss_dssp             -CEEEEEECCTTCBHHHHHHHTTBT-TSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCS
T ss_pred             cccEEEEecccCCCHHHHHHHhhhh-cCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence                899999999999998542210 113458899999999999999999999999999985

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.75  E-value=5.3e-18  Score=119.03  Aligned_cols=114  Identities=25%  Similarity=0.348  Sum_probs=93.7

Q ss_pred             hhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcC--CCCCCccccceeeecc--------eee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISG--TSHVNIVTPLGICCEG--------LVY  100 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~--l~~~~i~~l~~~~~~~--------lv~  100 (156)
                      ...+.+.||+|+||.||++.. .+..||+|.+...  ....+..|..++..  ++|+|++++++.+...        +++
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~   85 (301)
T 3q4u_A            9 DITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR--DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLIT   85 (301)
T ss_dssp             GCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             cEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc--cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEeh
Confidence            345567899999999999987 4788999998643  33445556665554  7999999999885542        999


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLI--------AVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH--------~~~~~h~~i~  155 (156)
                      ||+++|+|.+++..        ..+++..+..++.|++.||.|||        +.+++|+||.
T Consensus        86 e~~~~g~L~~~l~~--------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlk  140 (301)
T 3q4u_A           86 HYHEMGSLYDYLQL--------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK  140 (301)
T ss_dssp             CCCTTCBHHHHHTT--------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCC
T ss_pred             hhccCCCHHHHHhh--------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCC
Confidence            99999999999963        34889999999999999999999        9999999984

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.75  E-value=3.2e-18  Score=119.13  Aligned_cols=119  Identities=24%  Similarity=0.404  Sum_probs=99.6

Q ss_pred             hhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc-----eeeecCC
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG-----LVYEFMS  104 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----lv~e~~~  104 (156)
                      ....+.+.||+|+||.||++... +..+|+|.+.... ..+.+.+|+.++..++|+|++++.+.+...     +++||++
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   98 (278)
T 1byg_A           21 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA   98 (278)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred             hhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCC
Confidence            34456678999999999999875 7789999987542 446789999999999999999999986543     9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++....     ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        99 ~~~L~~~l~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk  144 (278)
T 1byg_A           99 KGSLVDYLRSRG-----RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLA  144 (278)
T ss_dssp             TEEHHHHHHHHH-----HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             CCCHHHHHHhcc-----cccCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Confidence            999999997532     2236788899999999999999999999999985

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.75  E-value=8.2e-19  Score=125.29  Aligned_cols=119  Identities=14%  Similarity=0.101  Sum_probs=92.1

Q ss_pred             HhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCC---------ChHHHHHHHHHHcCCC---------CCCccc
Q 047548           28 KKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMG---------NGEEFINEVACISGTS---------HVNIVT   89 (156)
Q Consensus        28 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~---------~~~~~~~e~~~l~~l~---------~~~i~~   89 (156)
                      ....+.+.+.||+|+||.||++.. .+..||+|.+.....         ..+.+.+|+.+++.++         |+|+++
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            344566778999999999999987 578999999975421         1156788888887765         555555


Q ss_pred             cce-----------------eeec--------------c---eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHH
Q 047548           90 PLG-----------------ICCE--------------G---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVV  135 (156)
Q Consensus        90 l~~-----------------~~~~--------------~---lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~  135 (156)
                      +.+                 .+..              .   ++|||+++|++.+.+..        ..+++..+..++.
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--------~~~~~~~~~~i~~  168 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--------KLSSLATAKSILH  168 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--------TCCCHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--------cCCCHHHHHHHHH
Confidence            444                 3332              2   99999999977776643        3378999999999


Q ss_pred             HHHHHHHHHH-hcCCCCcccc
Q 047548          136 GVARGLECLI-AVATLGLCIS  155 (156)
Q Consensus       136 ~i~~gl~yLH-~~~~~h~~i~  155 (156)
                      |++.||.||| +++++|+||-
T Consensus       169 qi~~aL~~lH~~~~ivHrDlK  189 (336)
T 2vuw_A          169 QLTASLAVAEASLRFEHRDLH  189 (336)
T ss_dssp             HHHHHHHHHHHHHCCBCSCCC
T ss_pred             HHHHHHHHHHHhCCEeECCCC
Confidence            9999999999 9999999984

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.75  E-value=6.4e-18  Score=120.84  Aligned_cols=116  Identities=24%  Similarity=0.257  Sum_probs=98.9

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---------ChHHHHHHHHHHcCCCCCCccccceeeecc----e
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---------NGEEFINEVACISGTSHVNIVTPLGICCEG----L   98 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---------~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----l   98 (156)
                      .+.+.||+|+||.||++.... +..||+|.+.....         ....+.+|+.++..++|+|++++++++...    +
T Consensus        27 ~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~l  106 (335)
T 3dls_A           27 STMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQL  106 (335)
T ss_dssp             EEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             EEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEE
Confidence            445789999999999998755 88999999876431         123577899999999999999999998876    8


Q ss_pred             eeecCCCC-ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNG-SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|++..| +|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       107 v~e~~~~g~~l~~~~~~~-------~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlk  157 (335)
T 3dls_A          107 VMEKHGSGLDLFAFIDRH-------PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIK  157 (335)
T ss_dssp             EEECCTTSCBHHHHHHTC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEEeCCCCccHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccC
Confidence            99998777 999998763       348899999999999999999999999999985

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.75  E-value=1.1e-17  Score=119.16  Aligned_cols=125  Identities=14%  Similarity=0.191  Sum_probs=102.4

Q ss_pred             HHHhhhhhhh-hccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCC-CCCCccccceeeecc--
Q 047548           26 DVKKMTNSFS-DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGT-SHVNIVTPLGICCEG--   97 (156)
Q Consensus        26 ~~~~~~~~~~-~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~--   97 (156)
                      +.....+.+. +.||+|+||.||++.... +..+|+|.+.....   ....+.+|+.++..+ .|+|++++.+.+...  
T Consensus        24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~  103 (327)
T 3lm5_A           24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE  103 (327)
T ss_dssp             HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence            3333333444 689999999999999765 88999999875332   236788999999988 569999999998876  


Q ss_pred             --eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 --LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 --lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                        +++||+++++|.+++....     ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       104 ~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dik  158 (327)
T 3lm5_A          104 IILILEYAAGGEIFSLCLPEL-----AEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLK  158 (327)
T ss_dssp             EEEEEECCTTEEGGGGGSSCC------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             EEEEEEecCCCcHHHHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCC
Confidence              9999999999999986432     3458899999999999999999999999999985

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.75  E-value=1.2e-17  Score=117.86  Aligned_cols=122  Identities=22%  Similarity=0.348  Sum_probs=96.5

Q ss_pred             HhhhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC------ChHHHHHHHHHHcCC---CCCCccccceeeecc
Q 047548           28 KKMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG------NGEEFINEVACISGT---SHVNIVTPLGICCEG   97 (156)
Q Consensus        28 ~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~------~~~~~~~e~~~l~~l---~~~~i~~l~~~~~~~   97 (156)
                      ....+.+.+.||+|+||.||++.... +..||+|.+.....      ....+.+|+.++..+   .|+|++++++.+...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            33445667899999999999999754 88999999874221      124567777777766   499999999987652


Q ss_pred             ---------eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 ---------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 ---------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                               +++|++. ++|.+++....     ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlk  147 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAP-----PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLK  147 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCC-----TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhcc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence                     8999997 59999997643     3348899999999999999999999999999985

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.75  E-value=9.6e-18  Score=119.28  Aligned_cols=125  Identities=24%  Similarity=0.442  Sum_probs=99.5

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcE--EEEEecccCCC--ChHHHHHHHHHHcCC-CCCCccccceeeecc----eee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRV--AAVKVLSESMG--NGEEFINEVACISGT-SHVNIVTPLGICCEG----LVY  100 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~--~a~k~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~  100 (156)
                      ...+.+.||+|+||.||++.... +..  +++|.+.....  ..+.+.+|+.++..+ +|+|++++.+.+...    +++
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~  105 (327)
T 1fvr_A           26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI  105 (327)
T ss_dssp             GCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEE
Confidence            44566789999999999998754 544  48888765322  235688999999999 899999999998776    999


Q ss_pred             ecCCCCChHHHhhhcCCC---------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSM---------STKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~---------~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++++|.+++......         ......+++..++.++.|++.||.|||+++++|+||.
T Consensus       106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlk  169 (327)
T 1fvr_A          106 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLA  169 (327)
T ss_dssp             CCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             ecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCc
Confidence            999999999999754200         0002358899999999999999999999999999985

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.74  E-value=1e-17  Score=123.59  Aligned_cols=117  Identities=14%  Similarity=0.194  Sum_probs=99.3

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc---------
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG---------   97 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~---------   97 (156)
                      .+.+.+.||+|+||.||++.... +..||+|.+.......   +.+.+|+.++..++|+|++++++++...         
T Consensus        27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~  106 (432)
T 3n9x_A           27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY  106 (432)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred             CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence            44566899999999999999765 8899999987643332   5688999999999999999999887542         


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++||+. ++|.+++..       ...+++..+..++.|++.||.|||+.+++|+||.
T Consensus       107 lv~e~~~-~~L~~~~~~-------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlk  156 (432)
T 3n9x_A          107 IVLEIAD-SDLKKLFKT-------PIFLTEEHIKTILYNLLLGENFIHESGIIHRDLK  156 (432)
T ss_dssp             EEEECCS-EEHHHHHHS-------SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             EEEecCC-cCHHHHHhc-------cCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            8999886 599999975       3348899999999999999999999999999984

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.74  E-value=1.2e-17  Score=119.63  Aligned_cols=116  Identities=13%  Similarity=0.170  Sum_probs=98.8

Q ss_pred             hhhhhccccccCceEEEEEeCCCcEEEEEecccCCCCh---HHHHHHHHHHcCCCC--CCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG---EEFINEVACISGTSH--VNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~--~~i~~l~~~~~~~----lv~e~  102 (156)
                      +.+.+.||+|+||.||++....+..+|+|.+.......   +.+.+|+.++..+.|  +|++++++++...    ++|| 
T Consensus        11 y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-   89 (343)
T 3dbq_A           11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-   89 (343)
T ss_dssp             EEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-
T ss_pred             EEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-
Confidence            34567899999999999988778899999987544333   568899999999966  8999999998876    8999 


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +.+++|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        90 ~~~~~L~~~l~~~-------~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDik  135 (343)
T 3dbq_A           90 CGNIDLNSWLKKK-------KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLK  135 (343)
T ss_dssp             CCSEEHHHHHHHS-------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            5678999999863       347888999999999999999999999999984

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.74  E-value=2.7e-17  Score=115.39  Aligned_cols=117  Identities=24%  Similarity=0.369  Sum_probs=97.0

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .+.+.||+|+||.||.+.... +..+|+|.+......   ...+.+|+.++..++|+|++++.+.+...    +++||+.
T Consensus         6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (299)
T 2r3i_A            6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH   85 (299)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             hhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc
Confidence            345689999999999999864 889999998754322   25788999999999999999999998776    9999997


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       ++|.+++....     ...++...+..++.|++.||.|||+++++|+||.
T Consensus        86 -~~L~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk  130 (299)
T 2r3i_A           86 -QDLKKFMDASA-----LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLK  130 (299)
T ss_dssp             -EEHHHHHHHTT-----TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             -CCHHHHHHhhh-----ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCC
Confidence             59999987642     2447888999999999999999999999999985

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.74  E-value=7.8e-18  Score=119.92  Aligned_cols=128  Identities=23%  Similarity=0.350  Sum_probs=101.9

Q ss_pred             HhhhhhhhhccccccCceEEEEEeCC------CcEEEEEecccCCCC--hHHHHHHHHHHcCC-CCCCccccceeeecc-
Q 047548           28 KKMTNSFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGN--GEEFINEVACISGT-SHVNIVTPLGICCEG-   97 (156)
Q Consensus        28 ~~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~-   97 (156)
                      ......+.+.||+|+||.||++....      ...+|+|.+......  .+.+.+|+.++..+ +|+|++++.+.+... 
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  123 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG  123 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence            33444566889999999999998643      247999998764332  25688999999999 899999999998776 


Q ss_pred             ---eeeecCCCCChHHHhhhcCCCC-------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 ---LVYEFMSNGSLHKFIYDKGSMS-------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 ---lv~e~~~~g~L~~~l~~~~~~~-------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                         +++||+++|+|.+++.......       .....++...+..++.|++.||.|||+++++|+||.
T Consensus       124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk  191 (333)
T 2i1m_A          124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVA  191 (333)
T ss_dssp             SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcc
Confidence               9999999999999997531000       002346889999999999999999999999999985

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.74  E-value=4.8e-18  Score=121.61  Aligned_cols=119  Identities=18%  Similarity=0.228  Sum_probs=101.0

Q ss_pred             hhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCC----h--------------HHHHHHHHHHcCCCCCCccccce
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGN----G--------------EEFINEVACISGTSHVNIVTPLG   92 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~----~--------------~~~~~e~~~l~~l~~~~i~~l~~   92 (156)
                      ...+.+.||+|+||.||.+.. .+..||+|.+......    .              +.+.+|+.++..++|+|++++.+
T Consensus        32 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~  110 (348)
T 2pml_X           32 DYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEG  110 (348)
T ss_dssp             TEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSE
T ss_pred             ceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEE
Confidence            445667899999999999998 7899999998742111    0              67899999999999999999999


Q ss_pred             eeecc----eeeecCCCCChHHH------hhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcccc
Q 047548           93 ICCEG----LVYEFMSNGSLHKF------IYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA-VATLGLCIS  155 (156)
Q Consensus        93 ~~~~~----lv~e~~~~g~L~~~------l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~-~~~~h~~i~  155 (156)
                      .+...    +++||+++++|.++      +....     ...+++..+..++.|++.||.|||+ .+++|+||.
T Consensus       111 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~  179 (348)
T 2pml_X          111 IITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-----TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVK  179 (348)
T ss_dssp             EEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-----CCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCC
T ss_pred             EEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-----ccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCC
Confidence            98876    99999999999998      44321     3458899999999999999999999 999999985

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.74  E-value=1.1e-17  Score=122.35  Aligned_cols=111  Identities=19%  Similarity=0.196  Sum_probs=92.6

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHc-CCCCCCccccceeeec----c----eeeecCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACIS-GTSHVNIVTPLGICCE----G----LVYEFMSN  105 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~-~l~~~~i~~l~~~~~~----~----lv~e~~~~  105 (156)
                      ++||+|+||.||++.... +..||+|.+..    ...+.+|+.++. ..+|+|++++++++..    .    ++|||+++
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~g  143 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG  143 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence            579999999999999765 88999999863    245667777764 4589999999988764    2    89999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+|.+++....     ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       144 g~L~~~l~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk  188 (400)
T 1nxk_A          144 GELFSRIQDRG-----DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK  188 (400)
T ss_dssp             EEHHHHHHCC--------CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             CcHHHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcC
Confidence            99999997642     3458899999999999999999999999999984

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.74  E-value=9.3e-18  Score=117.70  Aligned_cols=117  Identities=21%  Similarity=0.231  Sum_probs=99.6

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC----------ChHHHHHHHHHHcCCC-CCCccccceeeecc--
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----------NGEEFINEVACISGTS-HVNIVTPLGICCEG--   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----------~~~~~~~e~~~l~~l~-~~~i~~l~~~~~~~--   97 (156)
                      ..+.+.||+|+||.||++.... +..+|+|.+.....          ..+.+.+|+.++..+. |+|++++.+.+...  
T Consensus        19 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~   98 (298)
T 1phk_A           19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF   98 (298)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             cceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCe
Confidence            3455789999999999999865 88999999875421          1145778999999985 99999999998776  


Q ss_pred             --eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 --LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 --lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                        +++||+++++|.+++...       ..++...+..++.|++.||.|||+++++|+||.
T Consensus        99 ~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~  151 (298)
T 1phk_A           99 FFLVFDLMKKGELFDYLTEK-------VTLSEKETRKIMRALLEVICALHKLNIVHRDLK  151 (298)
T ss_dssp             EEEEEECCTTCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEEEEeccCCCcHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence              999999999999999763       347889999999999999999999999999985

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.74  E-value=2.1e-17  Score=116.24  Aligned_cols=111  Identities=19%  Similarity=0.205  Sum_probs=94.9

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHH-cCCCCCCccccceeeec----c----eeeecCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACI-SGTSHVNIVTPLGICCE----G----LVYEFMSN  105 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~l~~~~~~----~----lv~e~~~~  105 (156)
                      +.||+|+||.||++.... +..||+|.+..    ...+.+|+.++ ....|+|++++.+.+..    .    +++||+++
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~   99 (299)
T 3m2w_A           24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG   99 (299)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCS
T ss_pred             cccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCC
Confidence            679999999999999755 88999999853    34566777777 55699999999998865    2    89999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++....     ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       100 ~~L~~~l~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlk  144 (299)
T 3m2w_A          100 GELFSRIQDRG-----DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK  144 (299)
T ss_dssp             CBHHHHHHHCT-----TCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CcHHHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            99999998643     3458899999999999999999999999999984

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.74  E-value=6.3e-18  Score=120.85  Aligned_cols=124  Identities=20%  Similarity=0.184  Sum_probs=98.6

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccC------CCChHHHHHHHHHHcCCCCCCccccceeeecc----eee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES------MGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVY  100 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~  100 (156)
                      ..+.+.||+|+||.||++.... +..+|+|.+...      ....+.+.+|+.++..++|+|++++++++...    +++
T Consensus        28 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  107 (345)
T 3hko_A           28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVM  107 (345)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEE
Confidence            4556789999999999999765 889999998642      12236789999999999999999999999876    999


Q ss_pred             ecCCCCChHHHhhhcCCCC---------------------------------CCCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 047548          101 EFMSNGSLHKFIYDKGSMS---------------------------------TKNNRLEWTTLSEIVVGVARGLECLIAV  147 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~---------------------------------~~~~~~~~~~~~~i~~~i~~gl~yLH~~  147 (156)
                      ||+++|+|.+++.......                                 .....+++..+..++.|++.||.|||++
T Consensus       108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~  187 (345)
T 3hko_A          108 ELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ  187 (345)
T ss_dssp             ECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999985211000                                 0011134667888999999999999999


Q ss_pred             CCCCcccc
Q 047548          148 ATLGLCIS  155 (156)
Q Consensus       148 ~~~h~~i~  155 (156)
                      +++|+||.
T Consensus       188 ~ivH~Dlk  195 (345)
T 3hko_A          188 GICHRDIK  195 (345)
T ss_dssp             TEECCCCC
T ss_pred             CccccCCC
Confidence            99999985

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.74  E-value=1.6e-17  Score=120.08  Aligned_cols=115  Identities=21%  Similarity=0.250  Sum_probs=98.5

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---------hHHHHHHHHHHcCC-CCCCccccceeeecc----e
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---------GEEFINEVACISGT-SHVNIVTPLGICCEG----L   98 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---------~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----l   98 (156)
                      +.+.||+|+||+||++.... +..||+|++......         .+.+.+|+.++..+ .|+|++++.+.+...    +
T Consensus        98 ~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l  177 (365)
T 2y7j_A           98 PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFL  177 (365)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEE
T ss_pred             cceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEE
Confidence            34689999999999999864 899999998754321         24577899999998 899999999988766    9


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++||+++++|.+++...       ..+++..+..++.|++.||.|||+.+++|+|+.
T Consensus       178 v~e~~~g~~L~~~l~~~-------~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlk  227 (365)
T 2y7j_A          178 VFDLMRKGELFDYLTEK-------VALSEKETRSIMRSLLEAVSFLHANNIVHRDLK  227 (365)
T ss_dssp             EECCCTTCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEEeCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            99999999999999753       347889999999999999999999999999984

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.74  E-value=1.7e-17  Score=119.96  Aligned_cols=115  Identities=21%  Similarity=0.276  Sum_probs=91.5

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----------
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----------   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------   97 (156)
                      +.+.+.||+|+||.||++.... +..||+|.+.......   +.+.+|+.++..++|+|++++.+++...          
T Consensus        27 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~  106 (367)
T 1cm8_A           27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY  106 (367)
T ss_dssp             EEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCE
T ss_pred             EEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEE
Confidence            3455789999999999999765 8899999986543222   5688999999999999999999887542          


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++||+ +++|.+++...        .++...+..++.|++.||.|||+++++|+||.
T Consensus       107 lv~e~~-~~~L~~~~~~~--------~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlk  155 (367)
T 1cm8_A          107 LVMPFM-GTDLGKLMKHE--------KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLK  155 (367)
T ss_dssp             EEEECC-SEEHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             EEEecC-CCCHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHCCccccCcC
Confidence            899999 78999998752        37889999999999999999999999999984

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.73  E-value=9e-18  Score=117.35  Aligned_cols=120  Identities=27%  Similarity=0.367  Sum_probs=93.7

Q ss_pred             hhhhhhhccccccCceEEEEEeCC--C--cEEEEEecccCCC----ChHHHHHHHHHHcCCCCCCccccceeeecc---e
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE--G--RVAAVKVLSESMG----NGEEFINEVACISGTSHVNIVTPLGICCEG---L   98 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~--~--~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---l   98 (156)
                      ....+.+.||+|+||.||++.+..  +  ..+++|.+.....    ..+.+.+|+.++..++|+|++++++.+...   +
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   97 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM   97 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCcee
Confidence            345566889999999999998632  3  3689999875321    125688999999999999999999998876   9


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++||+++++|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        98 v~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dik  148 (291)
T 1u46_A           98 VTELAPLGSLLDRLRKH------QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLA  148 (291)
T ss_dssp             EEECCTTCBHHHHHHHH------GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             eEecccCCCHHHHHHhc------cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCc
Confidence            99999999999999764      3347889999999999999999999999999985

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.73  E-value=2.9e-17  Score=116.77  Aligned_cols=111  Identities=16%  Similarity=0.238  Sum_probs=96.8

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCC-CCCccccceeeecc------eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTS-HVNIVTPLGICCEG------LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~l~~~~~~~------lv~e~~~  104 (156)
                      .+.+.||+|+||.||++.... +..+|+|.+...  ..+.+.+|+.++..+. |+|++++.+++...      +++||++
T Consensus        39 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~  116 (330)
T 3nsz_A           39 QLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVN  116 (330)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCC
T ss_pred             EEEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccC
Confidence            445789999999999998754 889999998743  4567889999999996 99999999998763      8999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++..          ++...+..++.|++.||.|||+++++|+||.
T Consensus       117 ~~~l~~~~~~----------~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dik  157 (330)
T 3nsz_A          117 NTDFKQLYQT----------LTDYDIRFYMYEILKALDYCHSMGIMHRDVK  157 (330)
T ss_dssp             CCCHHHHGGG----------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             chhHHHHHHh----------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCC
Confidence            9999988753          6788899999999999999999999999985

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.73  E-value=4.1e-18  Score=121.20  Aligned_cols=116  Identities=26%  Similarity=0.361  Sum_probs=96.3

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      .+.+.||+|+||.||++.... +..||+|.+.......  ..+.+|+.++..++|+|++++.+++...    +++||++ 
T Consensus         5 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-   83 (324)
T 3mtl_A            5 IKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-   83 (324)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-
T ss_pred             EEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-
Confidence            345789999999999999864 8899999987533222  2456799999999999999999998776    9999997 


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++...      ...++...+..++.|++.||.|||+++++|+||.
T Consensus        84 ~~l~~~~~~~------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dik  127 (324)
T 3mtl_A           84 KDLKQYLDDC------GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLK  127 (324)
T ss_dssp             EEHHHHHHHT------TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCC
T ss_pred             cCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcC
Confidence            4999998764      3447889999999999999999999999999985

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.73  E-value=2.4e-17  Score=118.67  Aligned_cols=116  Identities=21%  Similarity=0.265  Sum_probs=97.6

Q ss_pred             hhhhccccccCceEEEEEeCCCcEEEEEecccCCCC------------hHHHHHHHHHHcCCCCCCccccceeeec----
Q 047548           33 SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGN------------GEEFINEVACISGTSHVNIVTPLGICCE----   96 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~------------~~~~~~e~~~l~~l~~~~i~~l~~~~~~----   96 (156)
                      .+.+.||+|+||.||++....+..||+|.+......            .+.+.+|+.++..++|+|++++.+++..    
T Consensus        25 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  104 (362)
T 3pg1_A           25 TVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEP  104 (362)
T ss_dssp             EEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTT
T ss_pred             EEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCC
Confidence            445789999999999998877899999988653211            1568899999999999999999998743    


Q ss_pred             -c----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           97 -G----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        97 -~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       .    +++||+. |+|.+.+...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       105 ~~~~~~lv~e~~~-~~l~~~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk  161 (362)
T 3pg1_A          105 AMHKLYLVTELMR-TDLAQVIHDQ------RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLH  161 (362)
T ss_dssp             TCCEEEEEEECCS-EEHHHHHHCT------TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             CcceEEEEEccCC-CCHHHHHHhc------ccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCC
Confidence             1    9999997 5898888754      3458899999999999999999999999999985

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.73  E-value=7.8e-18  Score=121.49  Aligned_cols=118  Identities=16%  Similarity=0.183  Sum_probs=94.4

Q ss_pred             hhhhhhccccccCceEEEEEeCC------CcEEEEEecccCCCCh------------HHHHHHHHHHcCCCCCCccccce
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGNG------------EEFINEVACISGTSHVNIVTPLG   92 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~~------------~~~~~e~~~l~~l~~~~i~~l~~   92 (156)
                      ...+.+.||+|+||.||++....      +..||+|.+.......            .....+...+..+.|+|++++++
T Consensus        36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~  115 (364)
T 3op5_A           36 AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWG  115 (364)
T ss_dssp             EEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEE
T ss_pred             eEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEe
Confidence            44566889999999999998754      4689999986532111            12345566677889999999999


Q ss_pred             eeecc--------eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           93 ICCEG--------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        93 ~~~~~--------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+...        ++|||+ +++|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~------~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlk  179 (364)
T 3op5_A          116 SGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN------AKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIK  179 (364)
T ss_dssp             EEEEEETTEEEEEEEEECE-EEEHHHHHHHT------TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             eeeeccCCcceEEEEEeCC-CCCHHHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCC
Confidence            87652        999999 99999999764      3458899999999999999999999999999984

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.73  E-value=1.7e-17  Score=118.92  Aligned_cols=117  Identities=21%  Similarity=0.291  Sum_probs=96.1

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC------hHHHHHHHHHHcCCCCCCccccceeeecc----eee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN------GEEFINEVACISGTSHVNIVTPLGICCEG----LVY  100 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~------~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~  100 (156)
                      +.+.+.||+|+||.||++.... +..+|+|.+......      .+.+.+|+.++..++|+|++++.+.+...    +++
T Consensus        12 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   91 (346)
T 1ua2_A           12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVF   91 (346)
T ss_dssp             -CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEE
T ss_pred             cEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEE
Confidence            4456789999999999999765 889999998753211      14678999999999999999999998766    999


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++ +|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        92 e~~~~-~l~~~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk  139 (346)
T 1ua2_A           92 DFMET-DLEVIIKDN------SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLK  139 (346)
T ss_dssp             ECCSE-EHHHHHTTC------CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             EcCCC-CHHHHHHhc------CcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCC
Confidence            99986 898888754      3447788899999999999999999999999985

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.73  E-value=2.3e-17  Score=120.26  Aligned_cols=116  Identities=13%  Similarity=0.166  Sum_probs=97.9

Q ss_pred             hhhhhccccccCceEEEEEeCCCcEEEEEecccCCCCh---HHHHHHHHHHcCCC--CCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG---EEFINEVACISGTS--HVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~--~~~i~~l~~~~~~~----lv~e~  102 (156)
                      +.+.+.||+|+||.||++....+..+|+|.+.......   ..+.+|+.++..+.  |+|++++++++...    ++|| 
T Consensus        58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-  136 (390)
T 2zmd_A           58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-  136 (390)
T ss_dssp             EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-
T ss_pred             eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-
Confidence            34557899999999999987778899999987543332   56889999999985  59999999988776    8999 


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +.+++|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       137 ~~~~~L~~~l~~~-------~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlk  182 (390)
T 2zmd_A          137 CGNIDLNSWLKKK-------KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLK  182 (390)
T ss_dssp             CCSEEHHHHHHHC-------SSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCC
T ss_pred             cCCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence            5678999999764       347788899999999999999999999999984

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.73  E-value=3.2e-17  Score=115.33  Aligned_cols=118  Identities=19%  Similarity=0.237  Sum_probs=98.0

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCC-----CChHHHHHHHHHHcCCCCCCccccceeeecc------ee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM-----GNGEEFINEVACISGTSHVNIVTPLGICCEG------LV   99 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv   99 (156)
                      +.+.+.||+|+||.||++.... +..+++|.+....     .....+.+|+.++..++|+|++++.+.+...      ++
T Consensus         7 y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (305)
T 2wtk_C            7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMV   86 (305)
T ss_dssp             BCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEE
T ss_pred             eeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEE
Confidence            3456789999999999999765 8899999987531     2236789999999999999999999987432      99


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||++++ +.+++....     ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        87 ~e~~~~~-l~~~~~~~~-----~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlk  136 (305)
T 2wtk_C           87 MEYCVCG-MQEMLDSVP-----EKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIK  136 (305)
T ss_dssp             EECCSEE-HHHHHHHST-----TCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             ehhccCC-HHHHHHhCc-----ccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence            9999875 777776532     3458889999999999999999999999999985

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.73  E-value=2.1e-17  Score=127.85  Aligned_cols=116  Identities=17%  Similarity=0.141  Sum_probs=99.5

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeec
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      .+.++||+|+||.||++.... +..+|+|++...    ....+.+..|..++..+ +|++++.+.+.+...    ++|||
T Consensus       344 ~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~  423 (674)
T 3pfq_A          344 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEY  423 (674)
T ss_dssp             EEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEEC
T ss_pred             EEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeC
Confidence            445789999999999999876 889999998742    22335678899999887 789999999988776    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       424 ~~gg~L~~~l~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLK  469 (674)
T 3pfq_A          424 VNGGDLMYHIQQV-------GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLK  469 (674)
T ss_dssp             CCSCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCC
T ss_pred             cCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCC
Confidence            9999999999864       338899999999999999999999999999984

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.73  E-value=8e-18  Score=121.19  Aligned_cols=117  Identities=19%  Similarity=0.222  Sum_probs=98.6

Q ss_pred             hhhhhccccccCceEEEEEeC----CCcEEEEEecccCC-----CChHHHHHHHHHHcCC-CCCCccccceeeecc----
Q 047548           32 NSFSDKVRQGGYGVVYRGKLH----EGRVAAVKVLSESM-----GNGEEFINEVACISGT-SHVNIVTPLGICCEG----   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~----~~~~~a~k~~~~~~-----~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----   97 (156)
                      ..+.+.||+|+||.||++...    .+..+|+|++....     .....+.+|+.++..+ +|+|++++.+.+...    
T Consensus        56 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~  135 (355)
T 1vzo_A           56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH  135 (355)
T ss_dssp             EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEE
T ss_pred             eEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEE
Confidence            445578999999999999873    48899999987532     2235567788888888 799999999988766    


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++||+++++|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       136 lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlk  186 (355)
T 1vzo_A          136 LILDYINGGELFTHLSQR-------ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIK  186 (355)
T ss_dssp             EEECCCCSCBHHHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             EEeecCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            999999999999999763       347889999999999999999999999999985

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.73  E-value=4.4e-18  Score=120.40  Aligned_cols=123  Identities=20%  Similarity=0.328  Sum_probs=101.8

Q ss_pred             HHHHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----
Q 047548           25 SDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----   97 (156)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----   97 (156)
                      .++......+.+.||+|+||.||++....  .+++|.+.....   ..+.+.+|+.++..++|+|++++.+.+...    
T Consensus        28 ~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  105 (319)
T 2y4i_B           28 WDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA  105 (319)
T ss_dssp             SSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEE
T ss_pred             ccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceE
Confidence            34444445667899999999999998753  488998875332   224577899999999999999999998876    


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++||+++++|.+++...      ...++...+..++.|++.||.|||+++++|+||.
T Consensus       106 iv~e~~~~~~L~~~l~~~------~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlk  157 (319)
T 2y4i_B          106 IITSLCKGRTLYSVVRDA------KIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLK  157 (319)
T ss_dssp             EECBCCCSEEHHHHTTSS------CCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             EEeecccCCcHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Confidence            999999999999999754      3347889999999999999999999999999985

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.73  E-value=1.9e-17  Score=116.02  Aligned_cols=117  Identities=14%  Similarity=0.174  Sum_probs=99.1

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCC
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      ...+.+.||+|+||.||++.... +..||+|.+.... ..+.+.+|+..+..+ +|++++.+.+++...    +++||+ 
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-   88 (298)
T 1csn_A           11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-   88 (298)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-
T ss_pred             ceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-
Confidence            34566789999999999999754 8899999886432 335678899999988 789999999888765    999999 


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|.+++...      ...++...+..++.|++.||.|||+++++|+||.
T Consensus        89 ~~~L~~~l~~~------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlk  133 (298)
T 1csn_A           89 GPSLEDLLDLC------GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIK  133 (298)
T ss_dssp             CCBHHHHHHHT------TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCC
T ss_pred             CCCHHHHHHHh------ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence            99999999864      3348899999999999999999999999999985

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.72  E-value=5.9e-17  Score=115.65  Aligned_cols=120  Identities=22%  Similarity=0.329  Sum_probs=99.5

Q ss_pred             HHHHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcC--CCCCCccccceeeecc-----
Q 047548           25 SDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISG--TSHVNIVTPLGICCEG-----   97 (156)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~--l~~~~i~~l~~~~~~~-----   97 (156)
                      .+.......+.+.||+|+||.||++... +..||+|.+...  ....+.+|..++..  ++|+|++++.+.+...     
T Consensus        37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~  113 (342)
T 1b6c_B           37 QRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT  113 (342)
T ss_dssp             HHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred             cccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence            3444445566789999999999999874 789999998643  34567778887776  7999999999887653     


Q ss_pred             ---eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCcccc
Q 047548           98 ---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLI--------AVATLGLCIS  155 (156)
Q Consensus        98 ---lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH--------~~~~~h~~i~  155 (156)
                         +++||+++|+|.+++...        .+++..+..++.|++.||.|||        +.+++|+||.
T Consensus       114 ~~~lv~e~~~~g~L~~~l~~~--------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlk  174 (342)
T 1b6c_B          114 QLWLVSDYHEHGSLFDYLNRY--------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK  174 (342)
T ss_dssp             CEEEEECCCTTCBHHHHHHHC--------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCS
T ss_pred             eeEEEEeecCCCcHHHHHhcc--------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCC
Confidence               899999999999999753        3788999999999999999999        8999999985

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.72  E-value=3.1e-17  Score=122.02  Aligned_cols=113  Identities=21%  Similarity=0.277  Sum_probs=94.3

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc----------e
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG----------L   98 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------l   98 (156)
                      .+.+.||+|+||.||++.... +..||+|.+......   .+.+.+|+.++..++|+||+++++++...          +
T Consensus        65 ~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~l  144 (464)
T 3ttj_A           65 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL  144 (464)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEE
T ss_pred             EEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEE
Confidence            445789999999999998765 889999998754322   25688999999999999999999987532          8


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++||+.+ ++.+.+..         .++...+..++.|++.||.|||+.+++|+||.
T Consensus       145 v~E~~~~-~l~~~~~~---------~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlk  191 (464)
T 3ttj_A          145 VMELMDA-NLCQVIQM---------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK  191 (464)
T ss_dssp             EEECCSE-EHHHHHTS---------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             EEeCCCC-CHHHHHhh---------cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            9999976 57776642         27888999999999999999999999999984

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.72  E-value=4.8e-17  Score=116.72  Aligned_cols=118  Identities=18%  Similarity=0.287  Sum_probs=98.4

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeec--------c-
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCE--------G-   97 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~--------~-   97 (156)
                      .+.+.+.||+|+||.||++.... +..||+|.+......   ...+.+|+.++..++|+|++++.+.+..        . 
T Consensus        18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   97 (351)
T 3mi9_A           18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG   97 (351)
T ss_dssp             GEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------C
T ss_pred             ceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCc
Confidence            34556789999999999999854 889999988653322   2568899999999999999999988765        1 


Q ss_pred             ---eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 ---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 ---lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                         +++||+.+ ++.+.+...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        98 ~~~lv~e~~~~-~l~~~l~~~------~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlk  151 (351)
T 3mi9_A           98 SIYLVFDFCEH-DLAGLLSNV------LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMK  151 (351)
T ss_dssp             EEEEEEECCSE-EHHHHHHCT------TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             eEEEEEeccCC-CHHHHHhhc------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCC
Confidence               89999975 788877654      3458899999999999999999999999999985

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.72  E-value=3.4e-17  Score=119.06  Aligned_cols=115  Identities=25%  Similarity=0.375  Sum_probs=89.0

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCC-CCCccccceeeecc------eee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTS-HVNIVTPLGICCEG------LVY  100 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~-~~~i~~l~~~~~~~------lv~  100 (156)
                      +.+.+.||+|+||.||++.... +..||+|.+.......   +...+|+.++..+. |+|++++.+++...      +++
T Consensus        11 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~   90 (388)
T 3oz6_A           11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVF   90 (388)
T ss_dssp             EEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEE
T ss_pred             eEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEe
Confidence            4556789999999999998765 8899999886533222   56789999999996 99999999998643      999


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||++ ++|.+++...        .++......++.|++.||.|||+.+++|+||.
T Consensus        91 e~~~-~~L~~~~~~~--------~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlk  136 (388)
T 3oz6_A           91 DYME-TDLHAVIRAN--------ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMK  136 (388)
T ss_dssp             ECCS-EEHHHHHHHT--------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             cccC-cCHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCC
Confidence            9997 5899988752        37788889999999999999999999999984

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.72  E-value=4.1e-17  Score=115.23  Aligned_cols=115  Identities=20%  Similarity=0.214  Sum_probs=91.6

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeee--------------
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICC--------------   95 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~--------------   95 (156)
                      +.+.+.||+|+||.||++.... +..||+|.+...... .+.+.+|+.++..++|+|++++++++.              
T Consensus        13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~   92 (320)
T 2i6l_A           13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLT   92 (320)
T ss_dssp             EEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CC
T ss_pred             eeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccc
Confidence            3455789999999999999876 889999988754322 257889999999999999999988762              


Q ss_pred             cc----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           96 EG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        96 ~~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ..    +++||+. |+|.+++..        ..++...+..++.|++.||.|||+++++|+||.
T Consensus        93 ~~~~~~lv~e~~~-~~L~~~~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  147 (320)
T 2i6l_A           93 ELNSVYIVQEYME-TDLANVLEQ--------GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLK  147 (320)
T ss_dssp             SCSEEEEEEECCS-EEHHHHHTT--------CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCS
T ss_pred             ccCceeEEeeccC-CCHHHHhhc--------CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence            11    8999997 599999864        337888999999999999999999999999985

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.72  E-value=1.3e-17  Score=128.14  Aligned_cols=122  Identities=17%  Similarity=0.279  Sum_probs=100.8

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeec------c---
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCE------G---   97 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~------~---   97 (156)
                      ....+.+.||+|+||.||++.... +..||+|.+......  .+.+.+|+.++..++|+|++++.+++..      .   
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            345667899999999999998755 889999998754322  2568899999999999999999887654      2   


Q ss_pred             -eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 -LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 -lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       +++||+++|+|.+++.....    ...+++..+..++.|++.||.|||+.+++|+||.
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~----~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLK  148 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFEN----CCGLKEGPIRTLLSDISSALRYLHENRIIHRDLK  148 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSC----TTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCC
T ss_pred             EEEEEeCCCCCHHHHHHhccc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Confidence             99999999999999986432    3357888899999999999999999999999985

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.72  E-value=1.3e-17  Score=129.10  Aligned_cols=121  Identities=17%  Similarity=0.201  Sum_probs=97.9

Q ss_pred             HHHhhhhhhhhccccccCceEEEEEeC--CCcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----
Q 047548           26 DVKKMTNSFSDKVRQGGYGVVYRGKLH--EGRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----   97 (156)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----   97 (156)
                      ++....+.+.+.||+|+||.||++...  ++..|++|.+.......  ..+.+|+.++..++|+||+++++++...    
T Consensus        76 ~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  155 (681)
T 2pzi_A           76 DIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHG  155 (681)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTS
T ss_pred             CEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCC
Confidence            333344566678999999999999975  47899999987543222  4678999999999999999999887642    


Q ss_pred             -----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 -----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 -----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                           +||||+++++|.+++..         .+++..+..++.|++.||.|||+++++|+||.
T Consensus       156 ~~~~~lv~E~~~g~~L~~~~~~---------~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlk  209 (681)
T 2pzi_A          156 DPVGYIVMEYVGGQSLKRSKGQ---------KLPVAEAIAYLLEILPALSYLHSIGLVYNDLK  209 (681)
T ss_dssp             CEEEEEEEECCCCEECC----C---------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CceeEEEEEeCCCCcHHHHHhC---------CCCHHHHHHHHHHHHHHHHHHHHCCCeecccC
Confidence                 89999999999887643         37899999999999999999999999999984

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.71  E-value=3.9e-17  Score=114.07  Aligned_cols=121  Identities=21%  Similarity=0.246  Sum_probs=94.3

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ...+.+.||+|+||.||++.... +..+|+|.+.......   +.+..+...+..+.|+|++++.+.+...    +++||
T Consensus         8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~   87 (290)
T 3fme_A            8 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMEL   87 (290)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEEC
T ss_pred             hhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEeh
Confidence            34556789999999999999754 8899999987643322   2344455557888999999999998876    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV-ATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~-~~~h~~i~  155 (156)
                      +++ +|.+++.....   ....+++..+..++.|++.||.|||++ +++|+||.
T Consensus        88 ~~~-~l~~~l~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlk  137 (290)
T 3fme_A           88 MDT-SLDKFYKQVID---KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVK  137 (290)
T ss_dssp             CSE-EHHHHHHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCS
T ss_pred             hcc-chHHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCC
Confidence            975 88887754210   034588999999999999999999998 99999985

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.71  E-value=5.2e-17  Score=117.50  Aligned_cols=115  Identities=20%  Similarity=0.252  Sum_probs=88.7

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----------
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----------   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------   97 (156)
                      +.+.+.||+|+||.||++.... +..||+|.+.......   +.+.+|+.++..++|+|++++.+++...          
T Consensus        31 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~  110 (367)
T 2fst_X           31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY  110 (367)
T ss_dssp             EEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred             eEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEE
Confidence            3455789999999999998755 8899999987543322   5688999999999999999999987531          


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++++ +++|.+++..        ..++...+..++.|++.||.|||+.+++|+||.
T Consensus       111 lv~e~~-~~~L~~~~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlk  159 (367)
T 2fst_X          111 LVTHLM-GADLNNIVKC--------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLK  159 (367)
T ss_dssp             EEEECC-CEECC-------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             EEeccc-CCCHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCC
Confidence            788887 6799888863        337889999999999999999999999999984

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.71  E-value=5e-17  Score=117.27  Aligned_cols=116  Identities=18%  Similarity=0.209  Sum_probs=97.7

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc---------e
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG---------L   98 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~---------l   98 (156)
                      .+.+.+.||+|+||.||++.... +..||+|.+.......  +.+.+|+.++..++|+|++++.+++...         +
T Consensus        28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i  107 (364)
T 3qyz_A           28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI  107 (364)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred             cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence            34556789999999999998765 8889999987543222  5688999999999999999999887532         8


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|++. ++|.+++...        .++...+..++.|++.||.|||+++++|+||.
T Consensus       108 v~e~~~-~~L~~~l~~~--------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dik  155 (364)
T 3qyz_A          108 VQDLME-TDLYKLLKTQ--------HLSNDHICYFLYQILRGLKYIHSANVLHRDLK  155 (364)
T ss_dssp             EEECCS-EEHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             EEcccC-cCHHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            999997 4999998753        37889999999999999999999999999985

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.71  E-value=2.7e-17  Score=119.43  Aligned_cols=118  Identities=17%  Similarity=0.215  Sum_probs=93.6

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeec-------------
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCE-------------   96 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~-------------   96 (156)
                      .+.+.+.||+|+||.||++.... +..||+|.+.....   ...+|+.+++.++|+|++++.+++..             
T Consensus         8 ~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~   84 (383)
T 3eb0_A            8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPD   84 (383)
T ss_dssp             TEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHTTCCCTTBCCEEEEEEEC------------
T ss_pred             eEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHHcCCCCccchhheeeecCccccccccccc
Confidence            34556789999999999998754 89999998864322   23478999999999999999987722             


Q ss_pred             -------------------------c----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 047548           97 -------------------------G----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV  147 (156)
Q Consensus        97 -------------------------~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~  147 (156)
                                               .    ++|||+++ +|.+.+.....   ....+++..+..++.|++.||.|||+.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~  160 (383)
T 3eb0_A           85 DHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIR---SGRSIPMNLISIYIYQLFRAVGFIHSL  160 (383)
T ss_dssp             -------------------------CCEEEEEECCCSE-EHHHHHHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence                                     1    89999984 88887764210   045588999999999999999999999


Q ss_pred             CCCCcccc
Q 047548          148 ATLGLCIS  155 (156)
Q Consensus       148 ~~~h~~i~  155 (156)
                      +++|+||.
T Consensus       161 gi~H~Dik  168 (383)
T 3eb0_A          161 GICHRDIK  168 (383)
T ss_dssp             TEECSCCC
T ss_pred             cCccCccC
Confidence            99999984

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.71  E-value=2.8e-17  Score=117.11  Aligned_cols=113  Identities=31%  Similarity=0.412  Sum_probs=89.7

Q ss_pred             hhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHH--HcCCCCCCccccceeeecc---------eee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVAC--ISGTSHVNIVTPLGICCEG---------LVY  100 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~--l~~l~~~~i~~l~~~~~~~---------lv~  100 (156)
                      ..+.+.||+|+||.||++.. .+..||+|++....  ...+..|..+  +..+.|+|++++++.+...         +++
T Consensus        15 y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~   91 (336)
T 3g2f_A           15 LKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVM   91 (336)
T ss_dssp             EEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred             hheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEE
Confidence            44567899999999999976 47899999986432  3334444444  4457999999998643321         899


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc---------CCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV---------ATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~---------~~~h~~i~  155 (156)
                      ||+++|+|.+++....        .++..+..++.|++.||.|||+.         +++|+||.
T Consensus        92 e~~~~g~L~~~l~~~~--------~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dik  147 (336)
T 3g2f_A           92 EYYPNGSLXKYLSLHT--------SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLN  147 (336)
T ss_dssp             CCCTTCBHHHHHHHCC--------BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCS
T ss_pred             ecCCCCcHHHHHhhcc--------cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccc
Confidence            9999999999997542        57888899999999999999999         99999984

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.71  E-value=5.1e-17  Score=118.81  Aligned_cols=119  Identities=19%  Similarity=0.269  Sum_probs=89.2

Q ss_pred             hhccccccCceEEEEEeC---CCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeec--c----eeeecCCC
Q 047548           35 SDKVRQGGYGVVYRGKLH---EGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCE--G----LVYEFMSN  105 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~---~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~--~----lv~e~~~~  105 (156)
                      +++||+|+||.||++...   .+..+|+|.+.... ....+.+|+.++..++|+|++++.+++..  .    +++||+.+
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~  104 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH  104 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS-CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC
Confidence            457999999999999965   37889999987542 33568899999999999999999999854  2    89999865


Q ss_pred             CChHHHhhhcCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSM--STKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~--~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       +|.+++......  ......+++..+..++.|++.||.|||+++++|+||.
T Consensus       105 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlk  155 (405)
T 3rgf_A          105 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLK  155 (405)
T ss_dssp             -EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             -CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcC
Confidence             888887632100  0002247889999999999999999999999999984

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.71  E-value=1.1e-17  Score=118.11  Aligned_cols=119  Identities=18%  Similarity=0.190  Sum_probs=94.7

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC-------ChHHHHHHHHHHcCC----CCCCccccceeeecc
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-------NGEEFINEVACISGT----SHVNIVTPLGICCEG   97 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-------~~~~~~~e~~~l~~l----~~~~i~~l~~~~~~~   97 (156)
                      ..+.+.+.||+|+||.||++.... +..+|+|.+.....       ....+.+|+.++..+    .|+|++++.+++...
T Consensus        31 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~  110 (312)
T 2iwi_A           31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQ  110 (312)
T ss_dssp             --CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC---
T ss_pred             hceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecC
Confidence            345566889999999999998754 88999999975432       112355677777776    899999999988765


Q ss_pred             ----eeeec-CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 ----LVYEF-MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 ----lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                          +++|+ +.+++|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       111 ~~~~~v~e~~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  166 (312)
T 2iwi_A          111 EGFMLVLERPLPAQDLFDYITEK-------GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIK  166 (312)
T ss_dssp             --CEEEEECCSSEEEHHHHHHHH-------CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCS
T ss_pred             CeEEEEEEecCCCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence                88898 7889999999764       237899999999999999999999999999985

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.71  E-value=4.3e-17  Score=120.16  Aligned_cols=118  Identities=13%  Similarity=0.181  Sum_probs=96.5

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCC------CCCCccccceeeecc----eee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGT------SHVNIVTPLGICCEG----LVY  100 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l------~~~~i~~l~~~~~~~----lv~  100 (156)
                      +.+.+.||+|+||.||++.... +..||+|.+.........+.+|+.++..+      .|+|++++.+.+...    +++
T Consensus        99 y~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  178 (429)
T 3kvw_A           99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTF  178 (429)
T ss_dssp             EEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEE
T ss_pred             EEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEE
Confidence            4556789999999999998765 88999999875433335566777776654      567999999988765    899


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+. ++|.+++....     ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       179 e~~~-~~L~~~l~~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlK  227 (429)
T 3kvw_A          179 ELLS-MNLYELIKKNK-----FQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLK  227 (429)
T ss_dssp             CCCC-CBHHHHHHHTT-----TCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCS
T ss_pred             eccC-CCHHHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            9996 59999997643     3458899999999999999999999999999984

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.70  E-value=1.7e-17  Score=117.99  Aligned_cols=124  Identities=18%  Similarity=0.213  Sum_probs=99.2

Q ss_pred             HHHhhhhhhhhccccccCceEEEEEe-C-CCcEEEEEecccCCCChHHHHHHHHHHcCCCCC------Cccccceeeecc
Q 047548           26 DVKKMTNSFSDKVRQGGYGVVYRGKL-H-EGRVAAVKVLSESMGNGEEFINEVACISGTSHV------NIVTPLGICCEG   97 (156)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~g~v~~~~~-~-~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~------~i~~l~~~~~~~   97 (156)
                      ++....+.+.+.||+|+||.||++.. . .+..||+|++.......+.+.+|+.++..+.|+      +++++.+.+...
T Consensus        10 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~   89 (339)
T 1z57_A           10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH   89 (339)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred             CCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence            33344556778999999999999986 3 378999999875433345677888888776544      588888887765


Q ss_pred             ----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 ----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 ----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                          +++||+ +++|.+++....     ...++...+..++.|++.||.|||+++++|+||.
T Consensus        90 ~~~~lv~e~~-~~~l~~~l~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk  145 (339)
T 1z57_A           90 GHICIVFELL-GLSTYDFIKENG-----FLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLK  145 (339)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTT-----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             CcEEEEEcCC-CCCHHHHHHhcC-----CCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCC
Confidence                999999 889999997643     3357889999999999999999999999999985

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.70  E-value=8e-17  Score=115.46  Aligned_cols=115  Identities=19%  Similarity=0.262  Sum_probs=96.6

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc---------ee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG---------LV   99 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~---------lv   99 (156)
                      ..+.+.||+|+||.||++.... +..||+|.+.......  ..+.+|+.++..++|+|++++++++...         ++
T Consensus        13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv   92 (353)
T 2b9h_A           13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYII   92 (353)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEE
T ss_pred             eEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEE
Confidence            3456789999999999999765 8899999987543222  4678999999999999999999876541         89


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +||+. ++|.+++...        .++...+..++.|++.||.|||+++++|+||.
T Consensus        93 ~e~~~-~~L~~~~~~~--------~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlk  139 (353)
T 2b9h_A           93 QELMQ-TDLHRVISTQ--------MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLK  139 (353)
T ss_dssp             ECCCS-EEHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             EeccC-ccHHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            99997 5899988752        37889999999999999999999999999985

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.70  E-value=1.5e-16  Score=115.19  Aligned_cols=113  Identities=20%  Similarity=0.292  Sum_probs=95.5

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----------e
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----------L   98 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------l   98 (156)
                      .+.+.||+|+||.||++.... +..||+|.+.......   +.+.+|+.++..++|+|++++.+++...          +
T Consensus        45 ~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~l  124 (371)
T 4exu_A           45 VSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYL  124 (371)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEE
T ss_pred             EEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEE
Confidence            345689999999999998765 8899999987643332   5688999999999999999999987653          7


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++||+. ++|.+.+.         ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       125 v~e~~~-~~l~~~~~---------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dik  171 (371)
T 4exu_A          125 VMPFMQ-TDLQKIMG---------MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLK  171 (371)
T ss_dssp             EEECCC-EEHHHHTT---------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             EEcccc-ccHHHHhh---------cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcC
Confidence            899997 58888773         237899999999999999999999999999985

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.70  E-value=2.7e-17  Score=116.93  Aligned_cols=120  Identities=23%  Similarity=0.281  Sum_probs=97.9

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCC-CCCccccceeee--------cc--
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTS-HVNIVTPLGICC--------EG--   97 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~-~~~i~~l~~~~~--------~~--   97 (156)
                      ...+.+.||+|+||.||++.... +..+|+|.+...... .+.+.+|+.++..+. |+|++++++.+.        ..  
T Consensus        29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~  108 (337)
T 3ll6_A           29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE  108 (337)
T ss_dssp             EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred             eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence            44566899999999999999764 889999988654322 256889999999995 999999998873        11  


Q ss_pred             --eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCcccc
Q 047548           98 --LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA--TLGLCIS  155 (156)
Q Consensus        98 --lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~--~~h~~i~  155 (156)
                        +++||+. |+|.+++.....    ...+++..+..++.|++.||.|||+.+  ++|+||.
T Consensus       109 ~~lv~e~~~-g~L~~~l~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dik  165 (337)
T 3ll6_A          109 FLLLTELCK-GQLVEFLKKMES----RGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLK  165 (337)
T ss_dssp             EEEEEECCS-EEHHHHHHHHHT----TCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCC
T ss_pred             EEEEEEecC-CCHHHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCC
Confidence              8999986 699998875221    345889999999999999999999999  9999985

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.70  E-value=1.4e-16  Score=115.28  Aligned_cols=114  Identities=20%  Similarity=0.250  Sum_probs=95.4

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----------
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----------   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------   97 (156)
                      +.+.+.||+|+||.||++.... +..||+|.+.......   +.+.+|+.++..++|+|++++.+++...          
T Consensus        27 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~  106 (371)
T 2xrw_A           27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY  106 (371)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEE
T ss_pred             eeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceE
Confidence            3455789999999999998765 8899999987543222   5688999999999999999999887532          


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++||+++ +|.+.+..         .++...+..++.|++.||.|||+++++|+||.
T Consensus       107 lv~e~~~~-~l~~~~~~---------~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlk  154 (371)
T 2xrw_A          107 IVMELMDA-NLCQVIQM---------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK  154 (371)
T ss_dssp             EEEECCSE-EHHHHHHS---------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             EEEEcCCC-CHHHHHhh---------ccCHHHHHHHHHHHHHHHHHHHHCCeecccCC
Confidence            89999975 78888753         27788999999999999999999999999985

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.70  E-value=7.6e-18  Score=122.11  Aligned_cols=120  Identities=16%  Similarity=0.064  Sum_probs=89.7

Q ss_pred             hhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHHHHH---HHHcCCCCCCccccceeee-----------
Q 047548           35 SDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFINEV---ACISGTSHVNIVTPLGICC-----------   95 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~~e~---~~l~~l~~~~i~~l~~~~~-----------   95 (156)
                      .+.||+|+||.||++.... +..||+|.+....    ...+.+.+|+   ..+..++|+|++++++.+.           
T Consensus        78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~  157 (377)
T 3byv_A           78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK  157 (377)
T ss_dssp             EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred             cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence            4689999999999999754 8899999987432    1226688999   5555668999999873332           


Q ss_pred             ----------------cc-eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           96 ----------------EG-LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        96 ----------------~~-lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                                      .. ++|||+ +|+|.+++......+.....+++..+..++.|++.||.|||+++++|+||.
T Consensus       158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDik  233 (377)
T 3byv_A          158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLR  233 (377)
T ss_dssp             CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence                            12 889999 679999998642211111223357888899999999999999999999984

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.70  E-value=1.5e-16  Score=114.19  Aligned_cols=114  Identities=20%  Similarity=0.290  Sum_probs=95.5

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----------
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----------   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------   97 (156)
                      +.+.+.||+|+||.||++.... +..||+|.+.......   +.+.+|+.++..++|+|++++.+++...          
T Consensus        26 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~  105 (353)
T 3coi_A           26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY  105 (353)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred             EEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEE
Confidence            3455789999999999999765 8899999987643322   5688999999999999999999887653          


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++||+. ++|.+++.         ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       106 lv~e~~~-~~l~~~~~---------~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlk  153 (353)
T 3coi_A          106 LVMPFMQ-TDLQKIMG---------LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLK  153 (353)
T ss_dssp             EEEECCS-EEGGGTTT---------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCC
T ss_pred             EEecccc-CCHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            8899997 58877763         237889999999999999999999999999985

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.70  E-value=1.6e-16  Score=113.56  Aligned_cols=112  Identities=18%  Similarity=0.196  Sum_probs=91.0

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeec----c----eeeecCCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCE----G----LVYEFMSNG  106 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~----~----lv~e~~~~g  106 (156)
                      +.||+|+||.||++.... +..||+|.+....   .........+..+.|+|++++.+.+..    .    +++||+++|
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg  111 (336)
T 3fhr_A           35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP---KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGG  111 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEESSH---HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTE
T ss_pred             eeeeeCCCeEEEEEEECCCCCEEEEEEecCcH---HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCC
Confidence            469999999999999875 8899999986432   222222233556689999999998865    2    899999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++....     ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       112 ~L~~~l~~~~-----~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlk  155 (336)
T 3fhr_A          112 ELFSRIQERG-----DQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVK  155 (336)
T ss_dssp             EHHHHHHTC------CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             CHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            9999998643     3458899999999999999999999999999985

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.69  E-value=1.3e-16  Score=111.64  Aligned_cols=116  Identities=14%  Similarity=0.166  Sum_probs=95.7

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc-----eeeecCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG-----LVYEFMSN  105 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----lv~e~~~~  105 (156)
                      ..+.+.||+|+||.||++.... +..+|+|.+.... ....+.+|+.++..+.|++++.....+...     +++||+ +
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~   88 (296)
T 3uzp_A           11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-G   88 (296)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred             EEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-C
Confidence            3456789999999999999744 8899999886543 335688999999999888877666555433     999999 8


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        89 ~~L~~~~~~~------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlk  132 (296)
T 3uzp_A           89 PSLEDLFNFC------SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVK  132 (296)
T ss_dssp             CBHHHHHHHT------TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             CCHHHHHHhh------ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCC
Confidence            8999999754      3448899999999999999999999999999985

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.69  E-value=1.7e-16  Score=112.14  Aligned_cols=116  Identities=13%  Similarity=0.166  Sum_probs=98.2

Q ss_pred             hhhhhccccccCceEEEEEeCCCcEEEEEecccCCCCh---HHHHHHHHHHcCCC--CCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG---EEFINEVACISGTS--HVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~--~~~i~~l~~~~~~~----lv~e~  102 (156)
                      +.+.+.||+|+||.||++....+..+|+|.+.......   ..+.+|+.++..+.  |+|++++.+.+...    +++| 
T Consensus        30 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-  108 (313)
T 3cek_A           30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-  108 (313)
T ss_dssp             EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-
T ss_pred             EEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-
Confidence            45567899999999999988778899999987543332   56889999999986  59999999988776    8889 


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +.+++|.+++...       ..++...+..++.|++.||.|||+++++|+||.
T Consensus       109 ~~~~~L~~~l~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlk  154 (313)
T 3cek_A          109 CGNIDLNSWLKKK-------KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLK  154 (313)
T ss_dssp             CCSEEHHHHHHHC-------SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             cCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence            5678999999763       347888999999999999999999999999985

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.69  E-value=3.7e-17  Score=117.20  Aligned_cols=117  Identities=17%  Similarity=0.151  Sum_probs=91.1

Q ss_pred             hhhhhhccccccCceEEEEEeC----CCcEEEEEecccCCCC------------hHHHHHHHHHHcCCCCCCccccceee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLH----EGRVAAVKVLSESMGN------------GEEFINEVACISGTSHVNIVTPLGIC   94 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~----~~~~~a~k~~~~~~~~------------~~~~~~e~~~l~~l~~~~i~~l~~~~   94 (156)
                      ...+.+.||+|+||.||++...    .+..+|+|........            ...+.+|+..+..+.|+|++++.+.+
T Consensus        38 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~  117 (345)
T 2v62_A           38 QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSG  117 (345)
T ss_dssp             EEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEE
T ss_pred             eEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccc
Confidence            4456689999999999999975    3678899988754321            12366788888999999999999988


Q ss_pred             ec----c----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           95 CE----G----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        95 ~~----~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ..    .    +++||+ +++|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus       118 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  178 (345)
T 2v62_A          118 LTEFKGRSYRFMVMERL-GIDLQKISGQN-------GTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIK  178 (345)
T ss_dssp             EEESSSCEEEEEEEECE-EEEHHHHCBGG-------GBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             ccccCCCcEEEEEEecc-CCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcC
Confidence            76    3    999999 99999998753       258899999999999999999999999999985

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.69  E-value=1.2e-16  Score=111.73  Aligned_cols=116  Identities=14%  Similarity=0.166  Sum_probs=94.2

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc-----eeeecCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG-----LVYEFMSN  105 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----lv~e~~~~  105 (156)
                      ..+.+.||+|+||.||++.... +..||+|.+.... ....+.+|+.++..+.|++++.....+...     +++||+ +
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~   88 (296)
T 4hgt_A           11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-G   88 (296)
T ss_dssp             CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred             eEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-C
Confidence            4556789999999999999754 8899999865432 224578899999999888877766655433     899999 8


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        89 ~~L~~~~~~~------~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlk  132 (296)
T 4hgt_A           89 PSLEDLFNFC------SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVK  132 (296)
T ss_dssp             CBHHHHHHHT------TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             CCHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            8999999754      3448899999999999999999999999999985

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.69  E-value=3.3e-17  Score=117.71  Aligned_cols=115  Identities=13%  Similarity=0.129  Sum_probs=93.4

Q ss_pred             hhhhhhccccccCceEEEEEeCC---------CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccc------------
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE---------GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVT------------   89 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~---------~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~------------   89 (156)
                      ...+.+.||+|+||.||++....         +..+|+|.+...    +.+.+|+.++..+.|+|+++            
T Consensus        43 ~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  118 (352)
T 2jii_A           43 QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLA  118 (352)
T ss_dssp             EEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCS
T ss_pred             eEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCccC
Confidence            44566889999999999998753         678999998643    45788999999999988887            


Q ss_pred             ---cceeeec-c----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           90 ---PLGICCE-G----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        90 ---l~~~~~~-~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                         +.+.+.. .    +++||+ +++|.+++....     ...+++..+..++.|++.||.|||+++++|+||.
T Consensus       119 i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dik  186 (352)
T 2jii_A          119 IPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-----KHVLSERSVLQVACRLLDALEFLHENEYVHGNVT  186 (352)
T ss_dssp             CCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-----GGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCC
T ss_pred             ccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-----cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCC
Confidence               4444443 2    999999 999999998631     2458899999999999999999999999999985

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.69  E-value=1.9e-16  Score=112.28  Aligned_cols=118  Identities=22%  Similarity=0.385  Sum_probs=95.1

Q ss_pred             hhhhhccccccCceEEEEEeC--CCcEEEEEecccCCCC---hHHHHHHHHHHcCC---CCCCccccceeee-----cc-
Q 047548           32 NSFSDKVRQGGYGVVYRGKLH--EGRVAAVKVLSESMGN---GEEFINEVACISGT---SHVNIVTPLGICC-----EG-   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~--~~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l---~~~~i~~l~~~~~-----~~-   97 (156)
                      +.+.+.||+|+||.||++...  ++..||+|.+......   ...+.+|+.++..+   .|+|++++++++.     .. 
T Consensus        13 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~   92 (326)
T 1blx_A           13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET   92 (326)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE
T ss_pred             eeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCc
Confidence            345678999999999999974  3788999998753222   23566777777655   8999999999876     22 


Q ss_pred             ---eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 ---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 ---lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                         +++||+. |+|.+++....     ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        93 ~~~lv~e~~~-~~L~~~l~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlk  147 (326)
T 1blx_A           93 KLTLVFEHVD-QDLTTYLDKVP-----EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLK  147 (326)
T ss_dssp             EEEEEEECCS-CBHHHHHHHSC-----TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             eEEEEEecCC-CCHHHHHHhcc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Confidence               8999997 59999997643     3347889999999999999999999999999985

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.68  E-value=1e-16  Score=117.78  Aligned_cols=117  Identities=18%  Similarity=0.240  Sum_probs=93.1

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----------eee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----------LVY  100 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------lv~  100 (156)
                      +.+.+.||+|+||.||++.... +..||+|.+....   ....+|+.++..++|+||+++.+++...          +++
T Consensus        56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~  132 (420)
T 1j1b_A           56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL  132 (420)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEE
T ss_pred             EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeeh
Confidence            3445789999999999999865 8999999886432   2234789999999999999998887431          799


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++ ++.+.+.....   ....+++..+..++.|++.||.|||+++++|+||.
T Consensus       133 e~~~~-~l~~~~~~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlk  183 (420)
T 1j1b_A          133 DYVPE-TVYRVARHYSR---AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK  183 (420)
T ss_dssp             ECCCE-EHHHHHHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCS
T ss_pred             hcccc-cHHHHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence            99976 67776653110   03458889999999999999999999999999984

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.68  E-value=5.9e-17  Score=116.87  Aligned_cols=122  Identities=16%  Similarity=0.168  Sum_probs=100.0

Q ss_pred             HhhhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCC-----------CCCccccceeee
Q 047548           28 KKMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTS-----------HVNIVTPLGICC   95 (156)
Q Consensus        28 ~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~-----------~~~i~~l~~~~~   95 (156)
                      ....+.+.+.||+|+||.||++.... +..||+|.+.........+.+|+.++..+.           |+|++++.+.+.
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             cCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            34455677899999999999999754 889999998754333456788888888765           789999998876


Q ss_pred             cc--------eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcccc
Q 047548           96 EG--------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV-ATLGLCIS  155 (156)
Q Consensus        96 ~~--------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~-~~~h~~i~  155 (156)
                      ..        +++|++ +++|.+++....     ...++...+..++.|++.||.|||++ +++|+||.
T Consensus        97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dik  159 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL-GENLLALIKKYE-----HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIK  159 (373)
T ss_dssp             EEETTEEEEEEEECCC-CEEHHHHHHHTT-----TSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCS
T ss_pred             ccCCCCceEEEEEecC-CCCHHHHHHHhh-----ccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCC
Confidence            42        899998 889999997643     34488899999999999999999998 99999985

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.68  E-value=3.3e-16  Score=116.96  Aligned_cols=116  Identities=16%  Similarity=0.169  Sum_probs=92.5

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccc-cceeeecc----eeeecCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVT-PLGICCEG----LVYEFMSN  105 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~-l~~~~~~~----lv~e~~~~  105 (156)
                      ..+.+.||+|+||.||++.... +..||+|++.... ....+..|+.++..+.|.+.+. +..+....    ++|||+ +
T Consensus         9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g   86 (483)
T 3sv0_A            9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-G   86 (483)
T ss_dssp             EECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred             EEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-C
Confidence            3456789999999999999754 8899999876432 2345788999999997755444 43333333    999999 8


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++...      ...+++..++.++.|++.||.|||+++++|+||.
T Consensus        87 ~sL~~ll~~~------~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIK  130 (483)
T 3sv0_A           87 PSLEDLFNFC------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIK  130 (483)
T ss_dssp             CBHHHHHHHT------TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             CCHHHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccC
Confidence            8999999754      3458899999999999999999999999999984

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.67  E-value=1.4e-16  Score=117.49  Aligned_cols=118  Identities=14%  Similarity=0.133  Sum_probs=88.9

Q ss_pred             hhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCCCCChH
Q 047548           35 SDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMSNGSLH  109 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~~g~L~  109 (156)
                      .+.||+|+||+||.+....+..||+|.+...  ..+.+.+|+.++..+ +|+||+++++.+...    +++||+. |+|.
T Consensus        20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~   96 (434)
T 2rio_A           20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQ   96 (434)
T ss_dssp             EEEEEECSTTCEEEEEESSSSEEEEEEEEGG--GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHH
T ss_pred             cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH--HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHH
Confidence            4679999999998766666899999988643  234577899999875 899999999988776    8999996 5999


Q ss_pred             HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          110 KFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       110 ~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++.............++..+..++.|++.||.|||+++++|+||.
T Consensus        97 ~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLk  142 (434)
T 2rio_A           97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLK  142 (434)
T ss_dssp             HHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             HHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCC
Confidence            9997643210000111233457799999999999999999999984

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.67  E-value=1.2e-16  Score=114.27  Aligned_cols=125  Identities=11%  Similarity=0.107  Sum_probs=97.4

Q ss_pred             HHHHhhhhhhhhccccccCceEEEEEeCC--CcEEEEEecccCCCChHHHHHHHHHHcCCCCCC------ccccceeeec
Q 047548           25 SDVKKMTNSFSDKVRQGGYGVVYRGKLHE--GRVAAVKVLSESMGNGEEFINEVACISGTSHVN------IVTPLGICCE   96 (156)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~--~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~l~~~~~~   96 (156)
                      .+.....+.+.+.||+|+||.||++....  +..||+|++.......+.+.+|+.++..+.|++      ++.+.+.+..
T Consensus        14 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~   93 (355)
T 2eu9_A           14 GDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF   93 (355)
T ss_dssp             TCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred             CceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence            33444455677899999999999998754  468999998754333456778888888776554      6777776665


Q ss_pred             c----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           97 G----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        97 ~----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .    +++||+ ++++.+++....     ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        94 ~~~~~lv~e~~-~~~l~~~l~~~~-----~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlk  150 (355)
T 2eu9_A           94 HGHMCIAFELL-GKNTFEFLKENN-----FQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLK  150 (355)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTT-----TCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCC
T ss_pred             CCeEEEEEecc-CCChHHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            4    999999 668888876542     3458899999999999999999999999999985

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.67  E-value=7.1e-17  Score=114.63  Aligned_cols=119  Identities=19%  Similarity=0.195  Sum_probs=98.4

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC-------ChHHHHHHHHHHcCCC--CCCccccceeeecc--
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-------NGEEFINEVACISGTS--HVNIVTPLGICCEG--   97 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-------~~~~~~~e~~~l~~l~--~~~i~~l~~~~~~~--   97 (156)
                      ....+.+.||+|+||.||++.... +..||+|.+.....       ..+.+.+|+.++..+.  |+|++++.+.+...  
T Consensus        43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~  122 (320)
T 3a99_A           43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS  122 (320)
T ss_dssp             TTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc
Confidence            344566899999999999998754 88999999875322       1245677888888885  59999999998876  


Q ss_pred             --eeeecCCC-CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 --LVYEFMSN-GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 --lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                        +++|++.+ ++|.+++...       ..+++..+..++.|++.||.|||+.+++|+||.
T Consensus       123 ~~lv~e~~~~~~~L~~~l~~~-------~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlk  176 (320)
T 3a99_A          123 FVLILERPEPVQDLFDFITER-------GALQEELARSFFWQVLEAVRHCHNCGVLHRDIK  176 (320)
T ss_dssp             EEEEEECCSSEEEHHHHHHHH-------CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             EEEEEEcCCCCccHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCC
Confidence              89999875 8999999763       337889999999999999999999999999985

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.66  E-value=1.3e-16  Score=115.38  Aligned_cols=115  Identities=15%  Similarity=0.047  Sum_probs=79.0

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh----HHHHHH---HHHHcCCCCCCccccceeee---------
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG----EEFINE---VACISGTSHVNIVTPLGICC---------   95 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~----~~~~~e---~~~l~~l~~~~i~~l~~~~~---------   95 (156)
                      .+.+.||+|+||.||++.... +..+|+|.+.......    +.+.+|   +..+.. .|+|+++++..+.         
T Consensus        65 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~  143 (371)
T 3q60_A           65 KLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQ  143 (371)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEET
T ss_pred             eeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecC
Confidence            445789999999999999764 8899999998754322    446667   455666 7999887442221         


Q ss_pred             -----------------cc--eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCC
Q 047548           96 -----------------EG--LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTL------SEIVVGVARGLECLIAVATL  150 (156)
Q Consensus        96 -----------------~~--lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~------~~i~~~i~~gl~yLH~~~~~  150 (156)
                                       ..  ++|||++ |+|.+++....      ..+....+      ..++.|++.||.|||+++++
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~------~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~iv  216 (371)
T 3q60_A          144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD------FVYVFRGDEGILALHILTAQLIRLAANLQSKGLV  216 (371)
T ss_dssp             TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH------HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc------cccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCc
Confidence                             11  8999998 79999998642      22344444      67779999999999999999


Q ss_pred             Ccccc
Q 047548          151 GLCIS  155 (156)
Q Consensus       151 h~~i~  155 (156)
                      |+||.
T Consensus       217 HrDik  221 (371)
T 3q60_A          217 HGHFT  221 (371)
T ss_dssp             ETTCS
T ss_pred             cCcCC
Confidence            99984

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.65  E-value=2.1e-16  Score=116.62  Aligned_cols=114  Identities=15%  Similarity=0.138  Sum_probs=91.0

Q ss_pred             hhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCCCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMSNGS  107 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~~g~  107 (156)
                      .+.++||+|+||+|+......+..||+|.+....  ...+.+|+.++..+ +|+||+++++.+...    +++|++. |+
T Consensus        27 ~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~  103 (432)
T 3p23_A           27 CPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC--FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-AT  103 (432)
T ss_dssp             EEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT--EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EE
T ss_pred             ecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CC
Confidence            4457899999999765555568899999986432  23456889999988 899999999988776    9999996 59


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |.+++....      ..........++.|++.||.|||+++++|+||.
T Consensus       104 L~~~l~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlK  145 (432)
T 3p23_A          104 LQEYVEQKD------FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLK  145 (432)
T ss_dssp             HHHHHHSSS------CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred             HHHHHHhcC------CCccchhHHHHHHHHHHHHHHHHHCcCEeCCCC
Confidence            999997642      223344557899999999999999999999985

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.65  E-value=4.2e-16  Score=113.69  Aligned_cols=117  Identities=16%  Similarity=0.202  Sum_probs=90.1

Q ss_pred             hhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----------eeee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----------LVYE  101 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------lv~e  101 (156)
                      +.+.+.||+|+||.||++....+..+|+|.+.....   ...+|+.++..++|+|++++.+++...          +++|
T Consensus        42 Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e  118 (394)
T 4e7w_A           42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLE  118 (394)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEE
T ss_pred             EEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEee
Confidence            455678999999999999987766688877654221   123689999999999999999887431          8999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++ ++...+.....   ....+++..+..++.|++.||.|||+++++|+||.
T Consensus       119 ~~~~-~l~~~~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlk  168 (394)
T 4e7w_A          119 YVPE-TVYRASRHYAK---LKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIK  168 (394)
T ss_dssp             CCSE-EHHHHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             ccCc-cHHHHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCC
Confidence            9987 45444432110   03458889999999999999999999999999984

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.65  E-value=8.4e-16  Score=110.40  Aligned_cols=120  Identities=18%  Similarity=0.191  Sum_probs=85.2

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeec----------c-ee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCE----------G-LV   99 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~----------~-lv   99 (156)
                      ..+.+.||+|+||.||++.... +..||+|.+............++..+..++|+|++++.+++..          . ++
T Consensus        25 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv  104 (360)
T 3e3p_A           25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVV  104 (360)
T ss_dssp             EEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEE
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEE
Confidence            3456789999999999999865 8899999886654444566777778888899999999988754          1 79


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLI--AVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH--~~~~~h~~i~  155 (156)
                      +||+++ ++...+.....   ....++...+..++.|++.||.|||  +.+++|+||.
T Consensus       105 ~e~~~~-~l~~~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlk  158 (360)
T 3e3p_A          105 MEYVPD-TLHRCCRNYYR---RQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIK  158 (360)
T ss_dssp             EECCSC-BHHHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCC
T ss_pred             eecccc-cHHHHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCC
Confidence            999986 66555543110   0445788899999999999999999  9999999985

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.65  E-value=8.9e-16  Score=109.06  Aligned_cols=123  Identities=19%  Similarity=0.239  Sum_probs=95.7

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh--HHHHHHHH-HHcCCCCCCccccceeeecc----eeee
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG--EEFINEVA-CISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~--~~~~~e~~-~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ....+.+.||+|+||.||++.... +..||+|.+.......  ..+..|+. ++..+.|+|++++.+.+...    +++|
T Consensus        22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e  101 (327)
T 3aln_A           22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME  101 (327)
T ss_dssp             CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence            334556789999999999999864 8899999987643222  34555555 77788999999999998876    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV-ATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~-~~~h~~i~  155 (156)
                      |+++ +|.+++.....  .....+++..+..++.|++.||.|||++ +++|+||.
T Consensus       102 ~~~~-~l~~~~~~~~~--~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlk  153 (327)
T 3aln_A          102 LMST-SFDKFYKYVYS--VLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIK  153 (327)
T ss_dssp             CCSE-EHHHHHHHHHH--TTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCC
T ss_pred             ecCC-ChHHHHHHHHh--hhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCC
Confidence            9985 88887753100  0034578899999999999999999999 99999985

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.64  E-value=1.8e-15  Score=106.84  Aligned_cols=116  Identities=16%  Similarity=0.218  Sum_probs=85.4

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .+.+.||+|+||.||++.... +..||+|.+.......   +.+..+..++..++|+|++++++.+...    +++||+ 
T Consensus        28 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-  106 (318)
T 2dyl_A           28 ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-  106 (318)
T ss_dssp             EEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred             cccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-
Confidence            445689999999999999864 8899999987643322   2344455567888999999999998876    899998 


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV-ATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~-~~~h~~i~  155 (156)
                      ++.+..+....      ...+++..+..++.|++.||.|||+. +++|+||.
T Consensus       107 ~~~~~~l~~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlk  152 (318)
T 2dyl_A          107 GTCAEKLKKRM------QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVK  152 (318)
T ss_dssp             SEEHHHHHHHH------TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred             CCcHHHHHHHh------ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCC
Confidence            44555554433      34478899999999999999999996 99999985

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.61  E-value=1.8e-15  Score=109.78  Aligned_cols=119  Identities=14%  Similarity=0.138  Sum_probs=93.4

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCC-CC-----Cccccceeeecc----ee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTS-HV-----NIVTPLGICCEG----LV   99 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~-~~-----~i~~l~~~~~~~----lv   99 (156)
                      ...+.+.||+|+||.||++.... +..||+|++.........+..|+.++..+. |+     +++.+.+.+...    ++
T Consensus        55 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  134 (382)
T 2vx3_A           55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLV  134 (382)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEE
T ss_pred             eEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEE
Confidence            34455789999999999998765 889999998754323355667777777663 33     488888877665    99


Q ss_pred             eecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCCcccc
Q 047548          100 YEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLI--AVATLGLCIS  155 (156)
Q Consensus       100 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH--~~~~~h~~i~  155 (156)
                      +||+.+ +|.+++....     ...+++..+..++.|++.||.|||  +.+++|+||.
T Consensus       135 ~e~~~~-~L~~~l~~~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlk  186 (382)
T 2vx3_A          135 FEMLSY-NLYDLLRNTN-----FRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK  186 (382)
T ss_dssp             EECCCC-BHHHHHHHTT-----TSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCS
T ss_pred             EecCCC-CHHHHHhhcC-----cCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCC
Confidence            999965 9999997642     345889999999999999999999  4689999984

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.55  E-value=1.1e-14  Score=101.95  Aligned_cols=104  Identities=10%  Similarity=0.028  Sum_probs=81.1

Q ss_pred             hhccccccCceEEEEEeCCCcEEEEEecccCCC-------------------ChHHHHHHHHHHcCCCCCCccccceeee
Q 047548           35 SDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMG-------------------NGEEFINEVACISGTSHVNIVTPLGICC   95 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~-------------------~~~~~~~e~~~l~~l~~~~i~~l~~~~~   95 (156)
                      .+.||+|+||.||++....+..+|+|.+.....                   ....+.+|+.++..++  | +.+.+.+.
T Consensus        95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~  171 (282)
T 1zar_A           95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA  171 (282)
T ss_dssp             EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred             cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence            378999999999999995589999999864321                   1245789999999998  4 55555544


Q ss_pred             cc---eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           96 EG---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        96 ~~---lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ..   ++|||+++++|.+ +..             .....++.|++.||.|||+.+++|+|+.
T Consensus       172 ~~~~~lvmE~~~g~~L~~-l~~-------------~~~~~i~~qi~~~l~~lH~~giiHrDlk  220 (282)
T 1zar_A          172 WEGNAVLMELIDAKELYR-VRV-------------ENPDEVLDMILEEVAKFYHRGIVHGDLS  220 (282)
T ss_dssp             EETTEEEEECCCCEEGGG-CCC-------------SCHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             ccceEEEEEecCCCcHHH-cch-------------hhHHHHHHHHHHHHHHHHHCCCEeCCCC
Confidence            44   9999999999988 421             1234689999999999999999999985

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.53  E-value=1.3e-14  Score=110.30  Aligned_cols=91  Identities=18%  Similarity=0.143  Sum_probs=75.8

Q ss_pred             CcEEEEEecccCC----C-------ChHHHHHHHHHHcCC-CCCCccccceeeecc----eeeecCCCCChHHHhhhcCC
Q 047548           54 GRVAAVKVLSESM----G-------NGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGS  117 (156)
Q Consensus        54 ~~~~a~k~~~~~~----~-------~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e~~~~g~L~~~l~~~~~  117 (156)
                      |+.+++|++....    .       ..+.+.+|+.+|..+ .|+|++++++++.+.    +||||++|++|.+.|...+ 
T Consensus       259 g~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~-  337 (569)
T 4azs_A          259 GEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGE-  337 (569)
T ss_dssp             CSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTC-
T ss_pred             cceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCC-
Confidence            6788999886421    1       114588999999999 799999999999887    9999999999999998643 


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 047548          118 MSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCI  154 (156)
Q Consensus       118 ~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i  154 (156)
                            .++..   .++.||+.||.|+|+++++|+||
T Consensus       338 ------~l~~~---~I~~QIl~AL~ylH~~GIIHRDI  365 (569)
T 4azs_A          338 ------EIDRE---KILGSLLRSLAALEKQGFWHDDV  365 (569)
T ss_dssp             ------CCCHH---HHHHHHHHHHHHHHHTTCEESCC
T ss_pred             ------CCCHH---HHHHHHHHHHHHHHHCCceeccC
Confidence                  24443   47899999999999999999998

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.52  E-value=2.5e-14  Score=108.20  Aligned_cols=104  Identities=10%  Similarity=0.050  Sum_probs=76.9

Q ss_pred             hccccccCceEEEEEeCCCcEEEEEecccCCCC---------hHHHHHHHHHHcCCCCCCccccceeeec--c--eeeec
Q 047548           36 DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGN---------GEEFINEVACISGTSHVNIVTPLGICCE--G--LVYEF  102 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~---------~~~~~~e~~~l~~l~~~~i~~l~~~~~~--~--lv~e~  102 (156)
                      +.||+|+||.||++... +..+++|........         .+.+.+|+.++..++|+|++.+..++..  .  ++|||
T Consensus       342 ~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~  420 (540)
T 3en9_A          342 HLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSY  420 (540)
T ss_dssp             ------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEEC
T ss_pred             CEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEEC
Confidence            57999999999999543 667777775432111         1347899999999999999954443333  3  99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++++|.+++..               ...++.|++.||.|||+++++|+||.
T Consensus       421 ~~ggsL~~~l~~---------------~~~i~~qi~~aL~~LH~~gIiHrDiK  458 (540)
T 3en9_A          421 INGKLAKDVIED---------------NLDIAYKIGEIVGKLHKNDVIHNDLT  458 (540)
T ss_dssp             CCSEEHHHHSTT---------------CTHHHHHHHHHHHHHHHTTEECTTCC
T ss_pred             CCCCCHHHHHHH---------------HHHHHHHHHHHHHHHHHCcCccCCCC
Confidence            999999998852               45789999999999999999999984

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.43  E-value=1.4e-13  Score=100.98  Aligned_cols=121  Identities=15%  Similarity=0.011  Sum_probs=82.3

Q ss_pred             hhhccccccCceEEEEEeCC-CcEEEEEecccCCC----ChHHHHHHHHHHcCCCC-CCccccce---------e-----
Q 047548           34 FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG----NGEEFINEVACISGTSH-VNIVTPLG---------I-----   93 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~----~~~~~~~e~~~l~~l~~-~~i~~l~~---------~-----   93 (156)
                      +.+.||+|+||.||++.... +..||+|++.....    ..+.+.+|+.++..+.| .+......         .     
T Consensus        82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (413)
T 3dzo_A           82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ  161 (413)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred             EecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence            34679999999999999765 88999999874221    23678899999988876 22111100         0     


Q ss_pred             -------ee-------cc--eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           94 -------CC-------EG--LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        94 -------~~-------~~--lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                             ..       ..  ++++ ..+++|.+++............+++..+..++.|++.||.|||+++++|+||.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiK  238 (413)
T 3dzo_A          162 KKKMIRVRLDERDMWVLSRFFLYP-RMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLR  238 (413)
T ss_dssp             ---------------CCSEEEEEE-CCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             CCccccccCCCccccccceEEEee-hhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcc
Confidence                   00       01  3444 44679998885210000013346677889999999999999999999999984

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.40  E-value=1.8e-12  Score=89.52  Aligned_cols=111  Identities=15%  Similarity=0.173  Sum_probs=78.0

Q ss_pred             hhhccccccCceEEEEEe-CCCcE--EEEEecccCCCCh-------------------------HHHHHHHHHHcCCCCC
Q 047548           34 FSDKVRQGGYGVVYRGKL-HEGRV--AAVKVLSESMGNG-------------------------EEFINEVACISGTSHV   85 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~-~~~~~--~a~k~~~~~~~~~-------------------------~~~~~e~~~l~~l~~~   85 (156)
                      +...||+|+||.||++.. ..+..  +|+|+++......                         ..+.+|...+..+.|+
T Consensus        51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~  130 (258)
T 1zth_A           51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA  130 (258)
T ss_dssp             EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC
Confidence            446799999999999997 55888  9999875431110                         2577899989888666


Q ss_pred             Cc--cccceeeecc-eeeecCCC-C----ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCcccc
Q 047548           86 NI--VTPLGICCEG-LVYEFMSN-G----SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLI-AVATLGLCIS  155 (156)
Q Consensus        86 ~i--~~l~~~~~~~-lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH-~~~~~h~~i~  155 (156)
                      ++  +..+.. ... ++|||+.+ |    +|.+....          .+......++.|++.+|.||| +.+++|+|+.
T Consensus       131 ~i~~p~~~~~-~~~~lVmE~~g~~g~~~~~L~~~~~~----------~~~~~~~~i~~qi~~~l~~lH~~~givHrDlk  198 (258)
T 1zth_A          131 GVSVPQPYTY-MKNVLLMEFIGEDELPAPTLVELGRE----------LKELDVEGIFNDVVENVKRLYQEAELVHADLS  198 (258)
T ss_dssp             TCCCCCEEEE-ETTEEEEECCEETTEECCBHHHHGGG----------GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCS
T ss_pred             CCCCCeEEEc-CCCEEEEEecCCCCCccccHHHHhhc----------cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCC
Confidence            43  333322 122 99999942 3    56554322          224456788999999999999 9999999984

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.19  E-value=2.1e-11  Score=88.51  Aligned_cols=109  Identities=9%  Similarity=0.060  Sum_probs=72.6

Q ss_pred             hhhhccccccCceEEEEEeCCCcEEEEEecccCCC---------------ChHH--------HHHHHHHHcCCCCCCcc-
Q 047548           33 SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMG---------------NGEE--------FINEVACISGTSHVNIV-   88 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~---------------~~~~--------~~~e~~~l~~l~~~~i~-   88 (156)
                      .+...||+|+||.||.|....|..||+|+++....               ....        ...|...+..+.+..+. 
T Consensus        98 ~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~v  177 (397)
T 4gyi_A           98 SVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPV  177 (397)
T ss_dssp             EEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred             EecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            45578999999999999987799999998764210               0011        12345555555332221 


Q ss_pred             -ccceeeecc-eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           89 -TPLGICCEG-LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        89 -~l~~~~~~~-lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       ..+.. ... ++|||+++++|.++..           .  .....++.|++.+|.|+|+.+++|+|+.
T Consensus       178 p~p~~~-~~~~LVME~i~G~~L~~l~~-----------~--~~~~~l~~qll~~l~~lH~~gIVHrDLK  232 (397)
T 4gyi_A          178 PEPIAQ-SRHTIVMSLVDALPMRQVSS-----------V--PDPASLYADLIALILRLAKHGLIHGDFN  232 (397)
T ss_dssp             CCEEEE-ETTEEEEECCSCEEGGGCCC-----------C--SCHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             Ceeeec-cCceEEEEecCCccHhhhcc-----------c--HHHHHHHHHHHHHHHHHHHCCCcCCCCC
Confidence             11211 112 9999999988765432           1  1234578899999999999999999985

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.82  E-value=6.4e-05  Score=51.36  Aligned_cols=101  Identities=10%  Similarity=-0.025  Sum_probs=71.6

Q ss_pred             hhhccccccCceEEEEEeCCCcEEEEEecccCC-CChHHHHHHHHHHcCCC-CCCccccceeeecc----eeeecCCCCC
Q 047548           34 FSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESM-GNGEEFINEVACISGTS-HVNIVTPLGICCEG----LVYEFMSNGS  107 (156)
Q Consensus        34 ~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~-~~~~~~~~e~~~l~~l~-~~~i~~l~~~~~~~----lv~e~~~~g~  107 (156)
                      +...++.++.+.||+.... +..+++|...... .....+.+|..++..+. +..++++++.....    ++||+++|.+
T Consensus        18 ~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~   96 (263)
T 3tm0_A           18 CVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVL   96 (263)
T ss_dssp             EEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEE
T ss_pred             eEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCee
Confidence            3456777888899998754 6788999876522 22345778888888763 56677777766554    9999999998


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV  147 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~  147 (156)
                      +.+.+..            ......++.+++..|..||+.
T Consensus        97 l~~~~~~------------~~~~~~~~~~l~~~l~~LH~~  124 (263)
T 3tm0_A           97 CSEEYED------------EQSPEKIIELYAECIRLFHSI  124 (263)
T ss_dssp             HHHHCCT------------TTCHHHHHHHHHHHHHHHHHS
T ss_pred             hhhccCC------------cccHHHHHHHHHHHHHHHhCC
Confidence            8765311            112246788999999999983

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.40  E-value=0.0013  Score=47.01  Aligned_cols=105  Identities=11%  Similarity=0.149  Sum_probs=70.7

Q ss_pred             hccccccCceEEEEEeCCCcEEEEEecc--cCC--CChHHHHHHHHHHcCCC--CCCccccceeeecc-------eeeec
Q 047548           36 DKVRQGGYGVVYRGKLHEGRVAAVKVLS--ESM--GNGEEFINEVACISGTS--HVNIVTPLGICCEG-------LVYEF  102 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~~~~~a~k~~~--~~~--~~~~~~~~e~~~l~~l~--~~~i~~l~~~~~~~-------lv~e~  102 (156)
                      +.++.|.++.+|.....+ ..+++|...  ...  .....+.+|..++..+.  +..+++++..+...       ++|||
T Consensus        44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~  122 (359)
T 3dxp_A           44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF  122 (359)
T ss_dssp             EECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred             EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence            357889999999987654 567778765  322  12245778888888775  34566776666543       89999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATL  150 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~  150 (156)
                      ++|..+.+..         ...++......++.+++..|..||+....
T Consensus       123 v~G~~l~~~~---------~~~l~~~~~~~~~~~l~~~La~LH~~~~~  161 (359)
T 3dxp_A          123 VSGRVLWDQS---------LPGMSPAERTAIYDEMNRVIAAMHTVDYQ  161 (359)
T ss_dssp             CCCBCCCCTT---------CTTCCHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred             cCCeecCCCc---------cccCCHHHHHHHHHHHHHHHHHHhCCCch
Confidence            9987764321         12256777888999999999999986543

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=97.24  E-value=0.00061  Score=46.09  Aligned_cols=93  Identities=19%  Similarity=0.105  Sum_probs=61.3

Q ss_pred             ccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCC--ccccceeeecc----eeeecCCCCChHHHh
Q 047548           39 RQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVN--IVTPLGICCEG----LVYEFMSNGSLHKFI  112 (156)
Q Consensus        39 g~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~--i~~l~~~~~~~----lv~e~~~~g~L~~~l  112 (156)
                      +.|..+.||+....++..+++|.....  ....+..|..++..+.+.+  +++++......    +++||++|.++.  .
T Consensus        29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~  104 (264)
T 1nd4_A           29 IGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S  104 (264)
T ss_dssp             CTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T
T ss_pred             cCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c
Confidence            456668999987665777899986543  2245677777777663322  55566665543    999999998773  1


Q ss_pred             hhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 047548          113 YDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA  148 (156)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~  148 (156)
                      . .         ..   ...++.+++..|..||+..
T Consensus       105 ~-~---------~~---~~~~~~~l~~~l~~lh~~~  127 (264)
T 1nd4_A          105 S-H---------LA---PAEKVSIMADAMRRLHTLD  127 (264)
T ss_dssp             S-C---------CC---HHHHHHHHHHHHHHHTTSC
T ss_pred             C-c---------CC---HhHHHHHHHHHHHHHhCCC
Confidence            1 0         11   1256777888888888754

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=95.33  E-value=0.046  Score=37.97  Aligned_cols=99  Identities=15%  Similarity=0.130  Sum_probs=65.2

Q ss_pred             ccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCC-CCCC--ccccceeeecc-------eeeecCCCC
Q 047548           37 KVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGT-SHVN--IVTPLGICCEG-------LVYEFMSNG  106 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l-~~~~--i~~l~~~~~~~-------lv~e~~~~g  106 (156)
                      .++.|....+|...    ..+++|..... .....+.+|..++..+ .+..  ++.........       ++|++++|.
T Consensus        27 ~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~  101 (304)
T 3sg8_A           27 ISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGV  101 (304)
T ss_dssp             EEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCE
T ss_pred             ecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCe
Confidence            47888888888753    45777775432 1235678888888765 3322  33333332221       678899998


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVAT  149 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~  149 (156)
                      ++......         .++......++.+++..+..||+...
T Consensus       102 ~l~~~~~~---------~l~~~~~~~~~~~l~~~la~LH~~~~  135 (304)
T 3sg8_A          102 PLTPLLLN---------NLPKQSQNQAAKDLARFLSELHSINI  135 (304)
T ss_dssp             ECCHHHHH---------TSCHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             ECCccccc---------cCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence            87654322         25677788999999999999998544

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=95.03  E-value=0.11  Score=36.29  Aligned_cols=99  Identities=12%  Similarity=-0.015  Sum_probs=66.5

Q ss_pred             ccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCC---Cccccceeeec----c-eeeecCCCCCh
Q 047548           37 KVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHV---NIVTPLGICCE----G-LVYEFMSNGSL  108 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~l~~~~~~----~-lv~e~~~~g~L  108 (156)
                      .++.|....+|..    +..+++|.... ......+.+|..++..+.+.   .+++.......    . ++|++++|.++
T Consensus        26 ~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l  100 (306)
T 3tdw_A           26 SLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQIL  100 (306)
T ss_dssp             EEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEEC
T ss_pred             ecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeEC
Confidence            4677777788876    45567777421 11225678899988887532   34444444431    1 99999999887


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVAT  149 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~  149 (156)
                      ......         .++......++.+++..|..||+...
T Consensus       101 ~~~~~~---------~l~~~~~~~~~~~lg~~La~LH~~~~  132 (306)
T 3tdw_A          101 GEDGMA---------VLPDDAKDRLALQLAEFMNELSAFPV  132 (306)
T ss_dssp             HHHHHT---------TSCHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred             chhhhh---------hCCHHHHHHHHHHHHHHHHHHhcCCc
Confidence            764321         25667778899999999999998643

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=94.75  E-value=0.14  Score=34.68  Aligned_cols=99  Identities=14%  Similarity=0.056  Sum_probs=63.4

Q ss_pred             cccccCc-eEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCC-CCCccccceeeecc----eeeecCCCCChHH
Q 047548           38 VRQGGYG-VVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTS-HVNIVTPLGICCEG----LVYEFMSNGSLHK  110 (156)
Q Consensus        38 lg~g~~g-~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~l~~~~~~~----lv~e~~~~g~L~~  110 (156)
                      +..|..+ .||+..... +..+.+|.-...  ....+..|...+..+. +-.+.+++..+...    ++|+++++.++.+
T Consensus        32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~  109 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQ  109 (272)
T ss_dssp             EECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHH
T ss_pred             ccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccc
Confidence            3344444 578766544 566778875432  2345677888777652 34466666665544    9999999988877


Q ss_pred             HhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 047548          111 FIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVAT  149 (156)
Q Consensus       111 ~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~  149 (156)
                      .....           ......+..+++..|.-||+...
T Consensus       110 ~~~~~-----------~~~~~~~~~~l~~~L~~Lh~~~~  137 (272)
T 4gkh_A          110 VLEEY-----------PDSGENIVDALAVFLRRLHSIPV  137 (272)
T ss_dssp             HHHHC-----------GGGHHHHHHHHHHHHHHHHTSCG
T ss_pred             cccCC-----------HHHHHHHHHHHHHHHHHhcCCCc
Confidence            65321           22334577888999999998543

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=94.47  E-value=0.13  Score=35.39  Aligned_cols=72  Identities=17%  Similarity=0.116  Sum_probs=48.1

Q ss_pred             hccccccCceEEEEEeCCCcEEEEEecccCCCCh-HHHHHHHHHHcCCCC---CCccccceeeecceeeecCCCCC
Q 047548           36 DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG-EEFINEVACISGTSH---VNIVTPLGICCEGLVYEFMSNGS  107 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~-~~~~~e~~~l~~l~~---~~i~~l~~~~~~~lv~e~~~~g~  107 (156)
                      +.+|.|..+.||+....+|..+.+|......... ..+..|...|..+..   ..+++.+......+++||++++.
T Consensus        21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~~~lv~e~l~~~~   96 (288)
T 3f7w_A           21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWDDRTLAMEWVDERP   96 (288)
T ss_dssp             EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEETTEEEEECCCCCC
T ss_pred             EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEeccCceEEEEeecccC
Confidence            3578899999999999888899999865433222 346778887776632   23444444322228999987653

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=92.51  E-value=0.14  Score=36.90  Aligned_cols=72  Identities=13%  Similarity=-0.001  Sum_probs=43.3

Q ss_pred             hccccccCceEEEEEeC-CCcEEEEEecccCCC--------ChHHHHHHHHHHcCCCC---CCccccceeeecc--eeee
Q 047548           36 DKVRQGGYGVVYRGKLH-EGRVAAVKVLSESMG--------NGEEFINEVACISGTSH---VNIVTPLGICCEG--LVYE  101 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~-~~~~~a~k~~~~~~~--------~~~~~~~e~~~l~~l~~---~~i~~l~~~~~~~--lv~e  101 (156)
                      +.+|.|.++.||++... ++..+++|...+...        ....+..|..++..+..   ..+++++......  ++||
T Consensus        36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d~~~~~lvmE  115 (397)
T 2olc_A           36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVME  115 (397)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEETTTTEEEEC
T ss_pred             EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEcCCccEEEEE
Confidence            36899999999999654 367888887653211        12345677777775521   2344444433222  8999


Q ss_pred             cCCCCC
Q 047548          102 FMSNGS  107 (156)
Q Consensus       102 ~~~~g~  107 (156)
                      ++++..
T Consensus       116 ~l~g~~  121 (397)
T 2olc_A          116 DLSHLK  121 (397)
T ss_dssp             CCTTSE
T ss_pred             eCCCcc
Confidence            997643

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=92.11  E-value=0.69  Score=33.47  Aligned_cols=98  Identities=12%  Similarity=0.174  Sum_probs=56.5

Q ss_pred             ccccccCceEEEEEeCC--------CcEEEEEecccCCCChHHHHHHHHHHcCCCCCC-ccccceeeecceeeecCCCCC
Q 047548           37 KVRQGGYGVVYRGKLHE--------GRVAAVKVLSESMGNGEEFINEVACISGTSHVN-IVTPLGICCEGLVYEFMSNGS  107 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~--------~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~l~~~~~~~lv~e~~~~g~  107 (156)
                      .+..|-...+|++...+        +..+.+|+............+|..++..+.... .+++++.+..++++||++|.+
T Consensus        57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~g~v~e~i~G~~  136 (379)
T 3feg_A           57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPEGRLEQYIPSRP  136 (379)
T ss_dssp             EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETTEEEEECCSEEE
T ss_pred             EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCCccEEEEecCcc
Confidence            45567777889887642        467888875432223345667888887663222 345566554449999998755


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVAT  149 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~  149 (156)
                      +..-            .+..   ..+..+++..|+-||+...
T Consensus       137 l~~~------------~l~~---p~~~~~ia~~La~LH~~~~  163 (379)
T 3feg_A          137 LKTQ------------ELRE---PVLSAAIATKMAQFHGMEM  163 (379)
T ss_dssp             CCGG------------GGGC---HHHHHHHHHHHHHHHTCCC
T ss_pred             CChh------------HhCC---HHHHHHHHHHHHHHhCCCC
Confidence            4210            0111   3456788999999998644

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=91.86  E-value=0.43  Score=33.72  Aligned_cols=111  Identities=8%  Similarity=-0.053  Sum_probs=65.5

Q ss_pred             cc-ccccCceEEEEEeC-------CCcEEEEEecccCC---C-ChHHHHHHHHHHcCCC---CCCccccceeeecc----
Q 047548           37 KV-RQGGYGVVYRGKLH-------EGRVAAVKVLSESM---G-NGEEFINEVACISGTS---HVNIVTPLGICCEG----   97 (156)
Q Consensus        37 ~l-g~g~~g~v~~~~~~-------~~~~~a~k~~~~~~---~-~~~~~~~e~~~l~~l~---~~~i~~l~~~~~~~----   97 (156)
                      .+ +.|....+|.....       .+..+++|......   . ....+.+|..++..+.   ...+++++..+...    
T Consensus        27 ~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g  106 (357)
T 3ats_A           27 GVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLG  106 (357)
T ss_dssp             EECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTS
T ss_pred             ECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccC
Confidence            45 77878889987653       14567788765432   1 1234667777666652   23455555554332    


Q ss_pred             ---eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 047548           98 ---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA  148 (156)
Q Consensus        98 ---lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~  148 (156)
                         ++||+++|..+.+.+...-.. .....++......++.+++..|.-||+..
T Consensus       107 ~~~~v~e~l~G~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~La~LH~~~  159 (357)
T 3ats_A          107 TPFFLMDYVEGVVPPDVMPYTFGD-NWFADAPAERQRQLQDATVAALATLHSIP  159 (357)
T ss_dssp             SCEEEEECCCCBCCCBTTBGGGSC-STTTTSCHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             CceEEEEecCCCChhhcCcccccc-cccCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence               899999987765432100000 00012455566778899999999999754

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=90.61  E-value=1.8  Score=30.34  Aligned_cols=89  Identities=16%  Similarity=0.109  Sum_probs=59.3

Q ss_pred             ccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCC---CCCccccceeeecc----eeeecCCCCChH
Q 047548           37 KVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTS---HVNIVTPLGICCEG----LVYEFMSNGSLH  109 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~l~~~~~~~----lv~e~~~~g~L~  109 (156)
                      .++.|....+|..... +..+++|.....  ....+..|...+..+.   ...+++.+......    ++|||+++..+.
T Consensus        43 ~l~gG~~n~~y~v~~~-~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~~  119 (312)
T 3jr1_A           43 KLYSGEMNEIWLINDE-VQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNK  119 (312)
T ss_dssp             EECCSSSSEEEEEESS-SCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCCC
T ss_pred             EeCCccceeeeEEEEC-CCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCCC
Confidence            4788888999988753 567778876532  2345677877777662   34566666555432    999999886421


Q ss_pred             HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 047548          110 KFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVAT  149 (156)
Q Consensus       110 ~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~  149 (156)
                                       .    ..+.++...|+-||+...
T Consensus       120 -----------------~----~~~~~lG~~LA~LH~~~~  138 (312)
T 3jr1_A          120 -----------------Q----SSFTIFAEKIAQLHQIQG  138 (312)
T ss_dssp             -----------------T----THHHHHHHHHHHHHHCCC
T ss_pred             -----------------c----hhHHHHHHHHHHHHcCCC
Confidence                             0    235678888999998654

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=89.83  E-value=0.85  Score=33.87  Aligned_cols=99  Identities=13%  Similarity=0.056  Sum_probs=58.0

Q ss_pred             ccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCc-cccceeeecceeeecCCCCChHHHhhh
Q 047548           37 KVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNI-VTPLGICCEGLVYEFMSNGSLHKFIYD  114 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~l~~~~~~~lv~e~~~~g~L~~~l~~  114 (156)
                      .++.|-...+|+....+ +..+++|+........-+..+|..++..+...++ +++++.+....+++|+++.++..    
T Consensus       115 ~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~~G~v~e~I~G~~l~~----  190 (458)
T 2qg7_A          115 IINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFTNGRIEEFMDGYALSR----  190 (458)
T ss_dssp             EECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEETTEEEEECCCSEECCT----
T ss_pred             EcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeCCeEEEEeeCCccCCh----
Confidence            45667778899888764 4677888764322111122467777776643333 45666554338999998744321    


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 047548          115 KGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATL  150 (156)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~  150 (156)
                             . .+..   ..++.+++..|+-||+....
T Consensus       191 -------~-~l~~---~~~~~~ia~~La~LH~~~~~  215 (458)
T 2qg7_A          191 -------E-DIKN---PKFQKLIAKNLKLLHDIKLN  215 (458)
T ss_dssp             -------T-TTTS---HHHHHHHHHHHHHHHTCCCC
T ss_pred             -------h-hcCC---HHHHHHHHHHHHHHhcCCcc
Confidence                   0 0111   24577889999999986543

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=86.58  E-value=1.9  Score=31.59  Aligned_cols=96  Identities=14%  Similarity=0.224  Sum_probs=58.6

Q ss_pred             ccccccCceEEEEEeCC--------CcEEEEEecccCCCChHHHHHHHHHHcCCCCCC-ccccceeeecceeeecCCCCC
Q 047548           37 KVRQGGYGVVYRGKLHE--------GRVAAVKVLSESMGNGEEFINEVACISGTSHVN-IVTPLGICCEGLVYEFMSNGS  107 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~--------~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~l~~~~~~~lv~e~~~~g~  107 (156)
                      .++.|....+|++...+        +..+.+|+.... .....+..|..++..+...+ .+++++.+...++++|++|.+
T Consensus        80 ~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~g~v~e~l~G~~  158 (429)
T 1nw1_A           80 RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIPSRP  158 (429)
T ss_dssp             EECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETTEEEECCCCEEE
T ss_pred             EeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCEEEEEeCCcc
Confidence            45667778899988652        467888876432 12145567887777663222 345555554448889997644


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA  148 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~  148 (156)
                      +...            .+.   ...++.+++..|+-||+..
T Consensus       159 l~~~------------~l~---~~~~~~~ia~~La~LH~~~  184 (429)
T 1nw1_A          159 LSCH------------EIS---LAHMSTKIAKRVAKVHQLE  184 (429)
T ss_dssp             CCTT------------GGG---SHHHHHHHHHHHHHHTTCC
T ss_pred             cChh------------hcC---CHHHHHHHHHHHHHHhCCc
Confidence            3210            011   1235778899999999854

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=84.47  E-value=2.5  Score=31.09  Aligned_cols=98  Identities=16%  Similarity=0.197  Sum_probs=55.6

Q ss_pred             ccccccCceEEEEEeCC--------CcEEEEEecccCCCChHHHHHHHHHHcCCCCCC-ccccceeeecceeeecCCCCC
Q 047548           37 KVRQGGYGVVYRGKLHE--------GRVAAVKVLSESMGNGEEFINEVACISGTSHVN-IVTPLGICCEGLVYEFMSNGS  107 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~--------~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~l~~~~~~~lv~e~~~~g~  107 (156)
                      .+..|....+|+.....        +..+++++........-+..+|..++..+.... .+++++.+....+++|++|.+
T Consensus        77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~~~~~I~efI~G~~  156 (424)
T 3mes_A           77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADFPEGRIEEFIDGEP  156 (424)
T ss_dssp             EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEETTEEEEECCCSEE
T ss_pred             EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEcCCCEEEEEeCCcc
Confidence            35566777788887652        467888876443211112346666666553222 334444332228999998854


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVAT  149 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~  149 (156)
                      +..-            .+..   ..++.+++..|+-||+...
T Consensus       157 l~~~------------~l~~---~~~~~~ia~~La~LH~~~~  183 (424)
T 3mes_A          157 LTTK------------QLQL---THICVEVAKNMGSLHIINS  183 (424)
T ss_dssp             CCTG------------GGGS---HHHHHHHHHHHHHHHTHHH
T ss_pred             CChh------------hcCC---HHHHHHHHHHHHHHhcCch
Confidence            3210            0111   2367788899999998643

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=80.65  E-value=0.21  Score=37.14  Aligned_cols=58  Identities=5%  Similarity=-0.076  Sum_probs=15.1

Q ss_pred             hhccccccCceEEEEEeCC-CcEEEE------EecccCCC---ChHHHHHHHHHHcCCCCCCccccceeee
Q 047548           35 SDKVRQGGYGVVYRGKLHE-GRVAAV------KVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICC   95 (156)
Q Consensus        35 ~~~lg~g~~g~v~~~~~~~-~~~~a~------k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~   95 (156)
                      .+.+|   ||.||++.+.. ...||+      |.......   ....+.++..+.....|+|+++.+++..
T Consensus       147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred             cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence            34565   99999998865 356676      55443221   1245777888888888999888766544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	156
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-24
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	4e-23
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-21
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-21
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-21
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-20
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-20
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-19
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-19
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-19
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-18
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-18
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-18
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-18
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-18
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-18
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-18
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-18
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	5e-18
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	5e-18
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-17
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-17
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-17
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	7e-17
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-16
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-16
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	7e-16
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	8e-16
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-15
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-15
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-15
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-15
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-15
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	4e-15
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	8e-15
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-14
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-14
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-14
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	4e-14
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	5e-14
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-14
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	6e-14
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	6e-14
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	8e-14
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-13
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-12
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-12
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-12
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-11
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-11
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-11
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-11
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	8e-11
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-10
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-10
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-10
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	4e-10
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	7e-10
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-09
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	4e-09
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-08
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	5e-08
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	1e-05

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.8 bits (230), Expect = 3e-24
 Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 8/114 (7%)

Query: 34  FSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGI 93
             +++  G +G V+ G  +     AVK L +   + + F+ E   +    H  +V    +
Sbjct: 17  LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 76

Query: 94  CCEG---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
             +    ++ E+M NGSL  F+           +L    L ++   +A G+  +
Sbjct: 77  VTQEPIYIITEYMENGSLVDFLKTPS-----GIKLTINKLLDMAAQIAEGMAFI 125

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.4 bits (221), Expect = 4e-23
 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 10/115 (8%)

Query: 34  FSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGI 93
           F  ++  G +GVV  GK       A+K++ E   + +EFI E   +   SH  +V   G+
Sbjct: 8   FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 67

Query: 94  CCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           C +     ++ E+M+NG L  ++ +        +R +   L E+   V   +E L
Sbjct: 68  CTKQRPIFIITEYMANGCLLNYLRE------MRHRFQTQQLLEMCKDVCEAMEYL 116

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.2 bits (213), Expect = 1e-21
 Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 14/117 (11%)

Query: 34  FSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTP 90
              ++  G +G VY+GK H     AVK+L+ +       + F NEV  +  T HVNI+  
Sbjct: 12  VGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69

Query: 91  LGICCEG---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           +G        +V ++    SL+  ++          + E   L +I    A+G++ L
Sbjct: 70  MGYSTAPQLAIVTQWCEGSSLYHHLHI------IETKFEMIKLIDIARQTAQGMDYL 120

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.5 bits (211), Expect = 1e-21
 Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 10/115 (8%)

Query: 34  FSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGI 93
           F  ++  G +G+V+ G        A+K + E   + E+FI E   +   SH  +V   G+
Sbjct: 9   FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 68

Query: 94  CCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           C E     LV+EFM +G L  +      + T+       TL  + + V  G+  L
Sbjct: 69  CLEQAPICLVFEFMEHGCLSDY------LRTQRGLFAAETLLGMCLDVCEGMAYL 117

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.9 bits (207), Expect = 5e-21
 Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 40  QGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG-- 97
           +G +G V  G  + G   AVK +       + F+ E + ++   H N+V  LG+  E   
Sbjct: 17  KGEFGDVMLGD-YRGNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 74

Query: 98  ---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
              +V E+M+ GSL  ++  +G      + L    L +  + V   +E L
Sbjct: 75  GLYIVTEYMAKGSLVDYLRSRG-----RSVLGGDCLLKFSLDVCEAMEYL 119

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 82.5 bits (203), Expect = 3e-20
 Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 10/117 (8%)

Query: 33  SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPL 91
           +   K+  G YG VY G   +     AVK L E     EEF+ E A +    H N+V  L
Sbjct: 20  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 79

Query: 92  GICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           G+C       ++ EFM+ G+L  ++ +          +    L  +   ++  +E L
Sbjct: 80  GVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEVSAVVLLYMATQISSAMEYL 131

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.1 bits (202), Expect = 3e-20
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 14/113 (12%)

Query: 40  QGGYGVVYRGKLH---EGRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGIC 94
            G +G V +G      +    A+KVL +       EE + E   +    +  IV  +G+C
Sbjct: 19  CGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC 78

Query: 95  CEG---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
                 LV E    G LHKF+        K   +  + ++E++  V+ G++ L
Sbjct: 79  QAEALMLVMEMAGGGPLHKFLVG------KREEIPVSNVAELLHQVSMGMKYL 125

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.9 bits (199), Expect = 1e-19
 Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 8/114 (7%)

Query: 34  FSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGI 93
              K+ QG +G V+ G  +     A+K L     + E F+ E   +    H  +V    +
Sbjct: 21  LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 80

Query: 94  CCEG---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
             E    +V E+MS GSL  F+  +         L    L ++   +A G+  +
Sbjct: 81  VSEEPIYIVTEYMSKGSLLDFLKGE-----TGKYLRLPQLVDMAAQIASGMAYV 129

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.3 bits (200), Expect = 1e-19
 Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 14/119 (11%)

Query: 33  SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVT 89
               ++  G  GVV++      G V A K++   +      + I E+  +   +   IV 
Sbjct: 9   EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVG 68

Query: 90  PLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
             G         +  E M  GSL + +   G       R+    L ++ + V +GL  L
Sbjct: 69  FYGAFYSDGEISICMEHMDGGSLDQVLKKAG-------RIPEQILGKVSIAVIKGLTYL 120

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.5 bits (198), Expect = 1e-19
 Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 16/114 (14%)

Query: 40  QGGYGVVYRGKLHE---GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGI 93
            G +G V +G        +  AVK+L     +    +E + E   +    +  IV  +GI
Sbjct: 17  SGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI 76

Query: 94  CCEG---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           C      LV E    G L+K++        +N  ++   + E+V  V+ G++ L
Sbjct: 77  CEAESWMLVMEMAELGPLNKYLQ-------QNRHVKDKNIIELVHQVSMGMKYL 123

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 78.5 bits (193), Expect = 1e-18
 Identities = 25/114 (21%), Positives = 39/114 (34%), Gaps = 16/114 (14%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEE----FINEVACISGTSHVNIVTPLGIC 94
            G +G VY  + +    V A+K +S S     E     I EV  +    H N +   G  
Sbjct: 25  HGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCY 84

Query: 95  CEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
                  LV E+    +       K         L+   ++ +  G  +GL  L
Sbjct: 85  LREHTAWLVMEYCLGSASDLLEVHKK-------PLQEVEIAAVTHGALQGLAYL 131

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.0 bits (191), Expect = 1e-18
 Identities = 24/121 (19%), Positives = 44/121 (36%), Gaps = 17/121 (14%)

Query: 36  DKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICC 95
           + + +G +G V+RGK   G   AVK+ S           E+       H NI+  +    
Sbjct: 9   ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADN 67

Query: 96  EG--------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV 147
           +         LV ++  +GSL  ++            +    + ++ +  A GL  L   
Sbjct: 68  KDNGTWTQLWLVSDYHEHGSLFDYL--------NRYTVTVEGMIKLALSTASGLAHLHME 119

Query: 148 A 148
            
Sbjct: 120 I 120

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 78.2 bits (192), Expect = 2e-18
 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 12/111 (10%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLS-ESMGNGEEFINEVACISGTSHVNIVTPLGICCEG 97
            G +GVV+R      G   A K +      + E    E+  +S   H  +V       + 
Sbjct: 36  TGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD 95

Query: 98  ----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
               ++YEFMS G L + + D      ++N++      E +  V +GL  +
Sbjct: 96  NEMVMIYEFMSGGELFEKVAD------EHNKMSEDEAVEYMRQVCKGLCHM 140

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.0 bits (191), Expect = 2e-18
 Identities = 27/127 (21%), Positives = 55/127 (43%), Gaps = 15/127 (11%)

Query: 33  SFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMGNGE--EFINEVACISGTSH 84
           + S ++ QG +G+VY G              A+K ++E+    E  EF+NE + +   + 
Sbjct: 23  TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC 82

Query: 85  VNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNR---LEWTTLSEIVVGV 137
            ++V  LG+  +G    ++ E M+ G L  ++         N        + + ++   +
Sbjct: 83  HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI 142

Query: 138 ARGLECL 144
           A G+  L
Sbjct: 143 ADGMAYL 149

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.3 bits (190), Expect = 2e-18
 Identities = 26/132 (19%), Positives = 51/132 (38%), Gaps = 17/132 (12%)

Query: 24  YSDVKKMTN-----SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLS-ESMGNGEEFINEV 76
           Y  V +  N         ++  G +G VY+ +  E   +AA KV+  +S    E+++ E+
Sbjct: 1   YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 60

Query: 77  ACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSE 132
             ++   H NIV  L          ++ EF + G++   + +          L  + +  
Sbjct: 61  DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE------RPLTESQIQV 114

Query: 133 IVVGVARGLECL 144
           +       L  L
Sbjct: 115 VCKQTLDALNYL 126

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 77.0 bits (189), Expect = 3e-18
 Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 14/118 (11%)

Query: 34  FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEE--FINEVACISGTSHVNIVTP 90
           F D +  G +  V   +     ++ A+K +++    G+E    NE+A +    H NIV  
Sbjct: 13  FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVAL 72

Query: 91  LGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
             I   G    L+ + +S G L   I +KG              S ++  V   ++ L
Sbjct: 73  DDIYESGGHLYLIMQLVSGGELFDRIVEKG-------FYTERDASRLIFQVLDAVKYL 123

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 77.0 bits (189), Expect = 4e-18
 Identities = 21/111 (18%), Positives = 44/111 (39%), Gaps = 12/111 (10%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLS-ESMGNGEEFINEVACISGTSHVNIVTPLGICCEG 97
            G +GVV+R      GRV   K ++     +     NE++ ++   H  ++       + 
Sbjct: 39  SGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK 98

Query: 98  ----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
               L+ EF+S G L   I      + ++ ++    +   +     GL+ +
Sbjct: 99  YEMVLILEFLSGGELFDRI------AAEDYKMSEAEVINYMRQACEGLKHM 143

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 76.7 bits (188), Expect = 4e-18
 Identities = 29/144 (20%), Positives = 54/144 (37%), Gaps = 27/144 (18%)

Query: 22  YNYSDVKKMTNSFSDKVR-----------QGGYGVVYRGKLH----EGRVAAVKVLSESM 66
           + + D  +    F+ ++             G +G V  G L          A+K L    
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 67  GNG--EEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMST 120
                 +F++E + +    H N++   G+  +     ++ EFM NGSL  F+       T
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 126

Query: 121 KNNRLEWTTLSEIVVGVARGLECL 144
                    L  ++ G+A G++ L
Sbjct: 127 ------VIQLVGMLRGIAAGMKYL 144

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.3 bits (187), Expect = 5e-18
 Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 17/116 (14%)

Query: 40  QGGYGVVYRGKLH----EGRVAAVKVLSESMGNG----EEFINEVACISGTSHVNIVTPL 91
            G +GVV RG+      +    AVK L   + +     ++FI EV  +    H N++   
Sbjct: 18  DGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 77

Query: 92  GICCEG---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           G+       +V E    GSL   +                TLS   V VA G+  L
Sbjct: 78  GVVLTPPMKMVTELAPLGSLLDRLRK------HQGHFLLGTLSRYAVQVAEGMGYL 127

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.8 bits (188), Expect = 5e-18
 Identities = 33/136 (24%), Positives = 50/136 (36%), Gaps = 24/136 (17%)

Query: 33  SFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGNG--EEFINEVACISG-TS 83
           SF   +  G +G V     +           AVK+L  S      E  ++E+  +S   +
Sbjct: 26  SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85

Query: 84  HVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGS-----------MSTKNNRLEWT 128
           H+NIV  LG C  G    ++ E+   G L  F+  K             M      L+  
Sbjct: 86  HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145

Query: 129 TLSEIVVGVARGLECL 144
            L      VA+G+  L
Sbjct: 146 DLLSFSYQVAKGMAFL 161

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.4 bits (182), Expect = 2e-17
 Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 15/114 (13%)

Query: 40  QGGYGVVYRGKLH----EGRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGI 93
           +G +G V++G            A+K       +   E+F+ E   +    H +IV  +G+
Sbjct: 17  EGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 76

Query: 94  CCEG---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
             E    ++ E  + G L  F+        +   L+  +L      ++  L  L
Sbjct: 77  ITENPVWIIMELCTLGELRSFLQV------RKYSLDLASLILYAYQLSTALAYL 124

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.8 bits (183), Expect = 2e-17
 Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 17/121 (14%)

Query: 34  FSDKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMGNGE--EFINEVACISGTSHVNI 87
           F++ + +G +G VY G L +        AVK L+     GE  +F+ E   +   SH N+
Sbjct: 31  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90

Query: 88  VTPLGICCEG-----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLE 142
           ++ LGIC        +V  +M +G L  FI ++       +      L    + VA+G++
Sbjct: 91  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET------HNPTVKDLIGFGLQVAKGMK 144

Query: 143 C 143
            
Sbjct: 145 F 145

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.5 bits (180), Expect = 4e-17
 Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 13/125 (10%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVL---SESMGNGEEFINEVACISGTSHVNIVTPLGICC 95
            G YG   + +    G++   K L   S +    +  ++EV  +    H NIV       
Sbjct: 14  TGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRII 73

Query: 96  EG------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVAT 149
           +       +V E+   G L   I        +   L+   +  ++  +   L+     + 
Sbjct: 74  DRTNTTLYIVMEYCEGGDLASVITKGTK---ERQYLDEEFVLRVMTQLTLALKECHRRSD 130

Query: 150 LGLCI 154
            G  +
Sbjct: 131 GGHTV 135

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 73.3 bits (179), Expect = 7e-17
 Identities = 31/140 (22%), Positives = 53/140 (37%), Gaps = 29/140 (20%)

Query: 34  FSDKVRQGGYGVVYRGKL------HEGRVAAVKVLSESMGNG--EEFINEVACISGTSHV 85
           +   + +G +G V++ +           + AVK+L E        +F  E A ++   + 
Sbjct: 17  YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 76

Query: 86  NIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSM-----------------STKNNR 124
           NIV  LG+C  G    L++E+M+ G L++F+                       S     
Sbjct: 77  NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 136

Query: 125 LEWTTLSEIVVGVARGLECL 144
           L       I   VA G+  L
Sbjct: 137 LSCAEQLCIARQVAAGMAYL 156

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.7 bits (178), Expect = 1e-16
 Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 14/115 (12%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKVLS-ESMGNGEEFINEVACISGTSHVNIVTPLGI 93
           +K+ QG  G VY    +  G+  A++ ++ +     E  INE+  +    + NIV  L  
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85

Query: 94  CCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
              G    +V E+++ GSL   + +           +   ++ +     + LE L
Sbjct: 86  YLVGDELWVVMEYLAGGSLTDVVTETCM--------DEGQIAAVCRECLQALEFL 132

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.8 bits (175), Expect = 3e-16
 Identities = 27/129 (20%), Positives = 49/129 (37%), Gaps = 24/129 (18%)

Query: 40  QGGYGVVYRGKL--------HEGRVAAVKVLSESMGNGE--EFINEVACISG-TSHVNIV 88
           +G +G V   +         +     AVK+L       +  + I+E+  +     H NI+
Sbjct: 23  EGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNII 82

Query: 89  TPLGICCEG----LVYEFMSNGSLHKFIYDKGSMS---------TKNNRLEWTTLSEIVV 135
             LG C +     ++ E+ S G+L +++  +                 +L    L     
Sbjct: 83  NLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAY 142

Query: 136 GVARGLECL 144
            VARG+E L
Sbjct: 143 QVARGMEYL 151

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.8 bits (173), Expect = 7e-16
 Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 11/110 (10%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG- 97
           +G +G+V+R       +    K +     +      E++ ++   H NI+          
Sbjct: 15  RGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESME 74

Query: 98  ---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
              +++EF+S   + + I            L    +   V  V   L+ L
Sbjct: 75  ELVMIFEFISGLDIFERINTSA------FELNEREIVSYVHQVCEALQFL 118

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (171), Expect = 8e-16
 Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 16/114 (14%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLS----ESMGNGEEFINEVACISGTSHVNIVTPLGIC 94
           +G +G VY  +  +   + A+KVL     E  G   +   EV   S   H NI+   G  
Sbjct: 16  KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 75

Query: 95  CEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
            +     L+ E+   G++++ +        K ++ +    +  +  +A  L   
Sbjct: 76  HDATRVYLILEYAPLGTVYRELQ-------KLSKFDEQRTATYITELANALSYC 122

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 69.8 bits (170), Expect = 1e-15
 Identities = 21/120 (17%), Positives = 37/120 (30%), Gaps = 20/120 (16%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEE----FINEVACISGTSHVNIVTPLGIC 94
            GG   V+  + L   R  AVKVL   +         F  E    +  +H  IV      
Sbjct: 17  FGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTG 76

Query: 95  CEG--------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA 146
                      +V E++   +L   ++ +G        +      E++    + L     
Sbjct: 77  EAETPAGPLPYIVMEYVDGVTLRDIVHTEG-------PMTPKRAIEVIADACQALNFSHQ 129

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.2 bits (171), Expect = 1e-15
 Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 29/140 (20%)

Query: 34  FSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGNGE--EFINEVACISG-TSH 84
           F   +  G +G V     +           AVK+L E   + E    ++E+  ++   SH
Sbjct: 41  FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 100

Query: 85  VNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKG----------------SMSTKNNR 124
            NIV  LG C       L++E+   G L  ++  K                       N 
Sbjct: 101 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 160

Query: 125 LEWTTLSEIVVGVARGLECL 144
           L +  L      VA+G+E L
Sbjct: 161 LTFEDLLCFAYQVAKGMEFL 180

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.2 bits (171), Expect = 1e-15
 Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 24/141 (17%)

Query: 23  NYSDVKKMTNSFSDKVRQGGYGVVYRGKLHEG---RVAAVKVLSE--SMGNGEEFINEVA 77
           +++D+K     F D + +G +G V + ++ +      AA+K + E  S  +  +F  E+ 
Sbjct: 8   DWNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE 62

Query: 78  CISG-TSHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMST---------KNN 123
            +     H NI+  LG C       L  E+  +G+L  F+     + T           +
Sbjct: 63  VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 122

Query: 124 RLEWTTLSEIVVGVARGLECL 144
            L    L      VARG++ L
Sbjct: 123 TLSSQQLLHFAADVARGMDYL 143

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.9 bits (168), Expect = 3e-15
 Identities = 22/114 (19%), Positives = 34/114 (29%), Gaps = 16/114 (14%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEE----FINEVACISGTSHVNIVTPLGIC 94
           +G +  V   + L   R  A+K+L +     E        E   +S   H   V      
Sbjct: 18  EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 77

Query: 95  CEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
            +         +  NG L K+I   G         + T        +   LE L
Sbjct: 78  QDDEKLYFGLSYAKNGELLKYIRKIG-------SFDETCTRFYTAEIVSALEYL 124

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.7 bits (167), Expect = 4e-15
 Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 26/137 (18%)

Query: 19  PKGYNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVA 77
           P+  +Y+D K         +  G +GVVY+ KL + G + A+K + +          E+ 
Sbjct: 17  PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQ 65

Query: 78  CISGTSHVNIVTPLGICCEG----------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEW 127
            +    H NIV                   LV +++         +     S     L  
Sbjct: 66  IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPV 121

Query: 128 TTLSEIVVGVARGLECL 144
             +   +  + R L  +
Sbjct: 122 IYVKLYMYQLFRSLAYI 138

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.1 bits (166), Expect = 4e-15
 Identities = 23/112 (20%), Positives = 35/112 (31%), Gaps = 14/112 (12%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLS--ESMGNGEEFINEVACISGTSHVNIVTPLGICCE 96
           +G YG V            AVK++    ++   E    E+      +H N+V   G   E
Sbjct: 15  EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 74

Query: 97  G----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           G    L  E+ S G L   I            +           +  G+  L
Sbjct: 75  GNIQYLFLEYCSGGELFDRIEPDI-------GMPEPDAQRFFHQLMAGVVYL 119

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.3 bits (164), Expect = 8e-15
 Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 19/123 (15%)

Query: 34  FSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSE---SMGNGEEFINEVACISGTSHVNIVT 89
           F  ++ +G +  VY+G   E     A   L +   +    + F  E   + G  H NIV 
Sbjct: 13  FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVR 72

Query: 90  PLGICCEG--------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGL 141
                           LV E M++G+L  ++        +   ++   L      + +GL
Sbjct: 73  FYDSWESTVKGKKCIVLVTELMTSGTLKTYLK-------RFKVMKIKVLRSWCRQILKGL 125

Query: 142 ECL 144
           + L
Sbjct: 126 QFL 128

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.5 bits (164), Expect = 1e-14
 Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 16/115 (13%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVKVL------SESMGNGEEFINEVACISGTSHVNIVTPLG 92
            G +G VY+G  + EG    + V       + S    +E ++E   ++   + ++   LG
Sbjct: 19  SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 78

Query: 93  ICCEG---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           IC      L+ + M  G L  ++ +          L W       V +A+G+  L
Sbjct: 79  ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 127

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 66.7 bits (162), Expect = 2e-14
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 19/117 (16%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEE-------FINEVACISGTSHVNIVTPL 91
           +GG+G VY  +  + G++ A+K L +     ++           ++ +S      IV   
Sbjct: 14  RGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMS 73

Query: 92  GICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
                      + + M+ G LH  +   G             +      +  GLE +
Sbjct: 74  YAFHTPDKLSFILDLMNGGDLHYHLSQHGVF-------SEADMRFYAAEIILGLEHM 123

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (161), Expect = 2e-14
 Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 23/128 (17%)

Query: 40  QGGYGVVYRGKLHE------GRVAAVKVLSESMGNGE--EFINEVACISGTSH-VNIVTP 90
           +G +G V              R  AVK+L E   + E    ++E+  +    H +N+V  
Sbjct: 23  RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 82

Query: 91  LGICCEG-----LVYEFMSNGSLHKFIYDKGSM---------STKNNRLEWTTLSEIVVG 136
           LG C +      ++ EF   G+L  ++  K +              + L    L      
Sbjct: 83  LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ 142

Query: 137 VARGLECL 144
           VA+G+E L
Sbjct: 143 VAKGMEFL 150

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 4e-14
 Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 17/115 (14%)

Query: 40  QGGYGVVYRGKLHEG-----RVAAVKVLSESMGNGE--EFINEVACISGTSHVNIVTPLG 92
            G +G VY+G L           A+K L       +  +F+ E   +   SH NI+   G
Sbjct: 17  AGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEG 76

Query: 93  ICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLEC 143
           +  +     ++ E+M NG+L KF+ +      K+       L  ++ G+A G++ 
Sbjct: 77  VISKYKPMMIITEYMENGALDKFLRE------KDGEFSVLQLVGMLRGIAAGMKY 125

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 5e-14
 Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 11/112 (9%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLS--ESMGNGEEFINEVACISGTSHVNIVTPLGIC-- 94
           +G YG+V     +      A+K +S  E     +  + E+  +    H NI+    I   
Sbjct: 18  EGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRA 77

Query: 95  --CEGLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
              E +   ++    +   +Y       K   L    +   +  + RGL+ +
Sbjct: 78  PTIEQMKDVYLVTHLMGADLYKL----LKTQHLSNDHICYFLYQILRGLKYI 125

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (159), Expect = 6e-14
 Identities = 22/115 (19%), Positives = 38/115 (33%), Gaps = 19/115 (16%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTS-HVNIVTPLGICCEG 97
            G  G V +          A+K+L +      +   EV      S   +IV  + +    
Sbjct: 22  LGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENL 77

Query: 98  --------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
                   +V E +  G L   I D+G     +        SEI+  +   ++ L
Sbjct: 78  YAGRKCLLIVMECLDGGELFSRIQDRG-----DQAFTEREASEIMKSIGEAIQYL 127

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 6e-14
 Identities = 26/145 (17%), Positives = 45/145 (31%), Gaps = 29/145 (20%)

Query: 20  KGYNYSDVKKMTNSFSDKVR------QGGYGVVYRGK-LHEGRVAAVKVLSESMGNG--- 69
            G+   +V K         R       G YG V        G   A+K L     +    
Sbjct: 2   SGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFA 61

Query: 70  EEFINEVACISGTSHVNIVTPLGICCEG----------LVYEFMSNGSLHKFIYDKGSMS 119
           +    E+  +    H N++  L +              LV  FM  G+    +       
Sbjct: 62  KRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLM------ 113

Query: 120 TKNNRLEWTTLSEIVVGVARGLECL 144
            K+ +L    +  +V  + +GL  +
Sbjct: 114 -KHEKLGEDRIQFLVYQMLKGLRYI 137

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 64.9 bits (157), Expect = 6e-14
 Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 14/116 (12%)

Query: 36  DKVRQGGYGVVYRGKLHEGRVAAVKVL---SESMGNGEEFINEVACISGTSHVNIVTPLG 92
           +K+ +G YGVVY+ + + G   A+K +    E  G     I E++ +    H NIV    
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67

Query: 93  ICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           +        LV+E +           +G        LE  T    ++ +  G+   
Sbjct: 68  VIHTKKRLVLVFEHLDQDLKKLLDVCEG-------GLESVTAKSFLLQLLNGIAYC 116

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.1 bits (158), Expect = 8e-14
 Identities = 17/115 (14%), Positives = 40/115 (34%), Gaps = 17/115 (14%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEE----FINEVACISGT-SHVNIVTPLGI 93
           +G +G V+  +  +  +  A+K L + +   ++     + E   +S    H  +      
Sbjct: 12  KGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCT 71

Query: 94  CCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
                    V E+++ G L   I           + + +  +     +  GL+ L
Sbjct: 72  FQTKENLFFVMEYLNGGDLMYHIQSCH-------KFDLSRATFYAAEIILGLQFL 119

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 63.6 bits (154), Expect = 2e-13
 Identities = 24/121 (19%), Positives = 41/121 (33%), Gaps = 23/121 (19%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLSESMGNG----------EEFINEVACISGTS-HVNI 87
           +G   VV R       +  AVK++  + G            E  + EV  +   S H NI
Sbjct: 13  RGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNI 72

Query: 88  VTPLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLEC 143
           +             LV++ M  G L  ++ +K         L      +I+  +   +  
Sbjct: 73  IQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV-------TLSEKETRKIMRALLEVICA 125

Query: 144 L 144
           L
Sbjct: 126 L 126

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (147), Expect = 2e-12
 Identities = 20/116 (17%), Positives = 42/116 (36%), Gaps = 18/116 (15%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLSESMGNG------EEFINEVACISGTSHVNIVTPLG 92
           +G +  VY+ +     ++ A+K +     +          + E+  +   SH NI+  L 
Sbjct: 8   EGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLD 67

Query: 93  ICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
                    LV++FM              +   +  L  + +   ++   +GLE L
Sbjct: 68  AFGHKSNISLVFDFMETDLEV-------IIKDNSLVLTPSHIKAYMLMTLQGLEYL 116

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.5 bits (146), Expect = 3e-12
 Identities = 21/116 (18%), Positives = 41/116 (35%), Gaps = 19/116 (16%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLSESMGNG-------EEFINEVACISGTSHVNIVTPL 91
            G + VV + +    G   A K + +            E+   EV+ +    H N++T  
Sbjct: 20  SGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH 79

Query: 92  GICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLEC 143
            +        L+ E ++ G L  F+ +K         L     +E +  +  G+  
Sbjct: 80  EVYENKTDVILILELVAGGELFDFLAEKE-------SLTEEEATEFLKQILNGVYY 128

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (145), Expect = 4e-12
 Identities = 23/114 (20%), Positives = 43/114 (37%), Gaps = 5/114 (4%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKVLS---ESMGNGEEFINEVACISGTSHVNIVTPL 91
             V  G YG V        G   AVK LS   +S+ + +    E+  +    H N++  L
Sbjct: 24  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83

Query: 92  GICCEGLVYEFMSNGSLHKFIYDKGSMS-TKNNRLEWTTLSEIVVGVARGLECL 144
            +       E  ++  L   +      +  K  +L    +  ++  + RGL+ +
Sbjct: 84  DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 137

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.8 bits (139), Expect = 2e-11
 Identities = 18/119 (15%), Positives = 32/119 (26%), Gaps = 20/119 (16%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVKVLS-------ESMGNGEEFINEVACIS--GTSHVNIVT 89
            GG+G VY G  + +    A+K +          + NG     EV  +    +    ++ 
Sbjct: 14  SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 73

Query: 90  PLGICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
            L          L+ E                  T+   L+          V   +   
Sbjct: 74  LLDWFERPDSFVLILERPEPVQDLFDFI------TERGALQEELARSFFWQVLEAVRHC 126

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (139), Expect = 3e-11
 Identities = 23/125 (18%), Positives = 49/125 (39%), Gaps = 23/125 (18%)

Query: 36  DKVRQGGYGVVYRGKLHE-GRVAAVKVL---SESMGNGEEFINEVACISGTSHVNIVTPL 91
            K+ QG +G V++ +  + G+  A+K +   +E  G     + E+  +    H N+V  +
Sbjct: 16  AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 75

Query: 92  GICCEG------------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVAR 139
            IC               LV++F  +          G +S    +   + +  ++  +  
Sbjct: 76  EICRTKASPYNRCKGSIYLVFDFCEHDLA-------GLLSNVLVKFTLSEIKRVMQMLLN 128

Query: 140 GLECL 144
           GL  +
Sbjct: 129 GLYYI 133

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.6 bits (138), Expect = 3e-11
 Identities = 21/109 (19%), Positives = 39/109 (35%), Gaps = 4/109 (3%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICC 95
            G  G+V         R  A+K LS    N    +    E+  +   +H NI++ L +  
Sbjct: 27  SGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 86

Query: 96  EGLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
                E   +  L   + D          L+   +S ++  +  G++ L
Sbjct: 87  PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 135

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.2 bits (137), Expect = 4e-11
 Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 14/117 (11%)

Query: 36  DKVRQGGYGVVYRGKLHE-GRVAAVKVL---SESMGNGEEFINEVACISGTSHVNIVTPL 91
           +K+ +G YGVVY+ +    G V A+K +   +E+ G     I E++ +   +H NIV  L
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67

Query: 92  GICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
            +        LV+EF+ +  L KF+            +    +   +  + +GL   
Sbjct: 68  DVIHTENKLYLVFEFL-HQDLKKFMDAS-----ALTGIPLPLIKSYLFQLLQGLAFC 118

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.4 bits (135), Expect = 8e-11
 Identities = 14/111 (12%), Positives = 32/111 (28%), Gaps = 14/111 (12%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG- 97
            G +G +Y G  +  G   A+K+      +  +   E            +  +  C    
Sbjct: 17  SGSFGDIYLGTDIAAGEEVAIKLECVKTKH-PQLHIESKIYKMMQGGVGIPTIRWCGAEG 75

Query: 98  ----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
               +V E +       F +          +    T+  +   +   +E +
Sbjct: 76  DYNVMVMELLGPSLEDLFNFCSR-------KFSLKTVLLLADQMISRIEYI 119

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.1 bits (134), Expect = 1e-10
 Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 15/117 (12%)

Query: 36  DKVRQGGYGVVYRGKLHE-GRVAAVKVL---SESMGNGEEFINEVACISGTSHVNIVTPL 91
           +K+ +G YG V++ K  E   + A+K +    +  G     + E+  +    H NIV   
Sbjct: 8   EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67

Query: 92  GICCEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
            +        LV+EF        F    G +       +   +   +  + +GL   
Sbjct: 68  DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDL-------DPEIVKSFLFQLLKGLGFC 117

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 55.6 bits (133), Expect = 2e-10
 Identities = 17/113 (15%), Positives = 35/113 (30%), Gaps = 20/113 (17%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEFINEVACISGTS-HVNIVTPLGIC--- 94
           +G Y  V+    +       VK+L       ++   E+  +       NI+T   I    
Sbjct: 45  RGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDP 102

Query: 95  ---CEGLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
                 LV+E ++N    +              L    +   +  + + L+  
Sbjct: 103 VSRTPALVFEHVNNTDFKQLY----------QTLTDYDIRFYMYEILKALDYC 145

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (131), Expect = 4e-10
 Identities = 17/113 (15%), Positives = 34/113 (30%), Gaps = 16/113 (14%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEE----FINEVACISGTSHVNIVTPLGIC 94
           +G +G V   +    GR  A+K+L + +   ++     + E   +  T H  +       
Sbjct: 15  KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF 74

Query: 95  CEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLEC 143
                   V E+ + G L   +        +               +   LE 
Sbjct: 75  QTHDRLCFVMEYANGGELFFHLS-------RERVFTEERARFYGAEIVSALEY 120

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.3 bits (130), Expect = 4e-10
 Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 9/95 (9%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVKVLSESMGNG----EEFINEVACISGTSHVNIVTPLGIC 94
            G +G V+  +  H GR  A+KVL + +       E   +E   +S  +H  I+   G  
Sbjct: 14  TGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF 73

Query: 95  CEG----LVYEFMSNGSLHKFIYDKGSMSTKNNRL 125
            +     ++ +++  G L   +           + 
Sbjct: 74  QDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF 108

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.0 bits (129), Expect = 7e-10
 Identities = 20/114 (17%), Positives = 36/114 (31%), Gaps = 16/114 (14%)

Query: 40  QGGYGVVYRGKLHE-GRVAAVKVLS----ESMGNGEEFINEVACISGTSHVNIVTPLGIC 94
            G +G V   K  E G   A+K+L       +   E  +NE   +   +   +V      
Sbjct: 51  TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110

Query: 95  CE----GLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
            +     +V E+++ G +   +   G       R            +    E L
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIG-------RFSEPHARFYAAQIVLTFEYL 157

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.2 bits (124), Expect = 3e-09
 Identities = 25/122 (20%), Positives = 44/122 (36%), Gaps = 23/122 (18%)

Query: 40  QGGYGVVYRGKLHE--GRVAAVKVLSESMGNG---EEFINEVAC---ISGTSHVNIVTPL 91
           +G YG V++ +  +  GR  A+K +    G        I EVA    +    H N+V   
Sbjct: 17  EGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLF 76

Query: 92  GICCEG---------LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLE 142
            +C            LV+E +                     +   T+ +++  + RGL+
Sbjct: 77  DVCTVSRTDRETKLTLVFEHVDQDLTTYLDK------VPEPGVPTETIKDMMFQLLRGLD 130

Query: 143 CL 144
            L
Sbjct: 131 FL 132

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.0 bits (123), Expect = 4e-09
 Identities = 12/123 (9%), Positives = 38/123 (30%), Gaps = 14/123 (11%)

Query: 36  DKVRQGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGIC 94
            K+  G +  V+  K +      A+K++       E   +E+  +   +  +      + 
Sbjct: 19  RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 78

Query: 95  CEGLV-----YEFMSNGSLHKFI--------YDKGSMSTKNNRLEWTTLSEIVVGVARGL 141
              ++     +       +H  +                ++  +    + +I   +  GL
Sbjct: 79  ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGL 138

Query: 142 ECL 144
           + +
Sbjct: 139 DYM 141

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 1e-08
 Identities = 20/119 (16%), Positives = 38/119 (31%), Gaps = 21/119 (17%)

Query: 40  QGGYGVVYRGKL----HEGRVAAVKVLS-----ESMGNGEEFINEVACISGTSHVNIVTP 90
            G YG V+  +       G++ A+KVL      +     E    E   +        +  
Sbjct: 34  TGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVT 93

Query: 91  LGICCEG-----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
           L    +      L+ ++++ G L   +        +  R     +   V  +   LE L
Sbjct: 94  LHYAFQTETKLHLILDYINGGELFTHLS-------QRERFTEHEVQIYVGEIVLALEHL 145

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 48.7 bits (115), Expect = 5e-08
 Identities = 11/111 (9%), Positives = 34/111 (30%), Gaps = 14/111 (12%)

Query: 40  QGGYGVVYRGK-LHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG- 97
           +G +GV++ G  L   +  A+K       +  +  +E       +    +  +    +  
Sbjct: 15  EGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEG 73

Query: 98  ----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECL 144
               LV + +              +     +    T++     +   ++ +
Sbjct: 74  LHNVLVIDLLGPSLEDL-------LDLCGRKFSVKTVAMAAKQMLARVQSI 117

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 40.9 bits (95), Expect = 1e-05
 Identities = 11/124 (8%), Positives = 30/124 (24%), Gaps = 17/124 (13%)

Query: 32  NSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSES-----------MGNGEEFINEVACIS 80
           ++    + +G    V+     +     VK                      F       +
Sbjct: 2   DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSA 61

Query: 81  GTSHVNIVTPLGICCEGLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARG 140
                 +    G+     VY +  N      +  +   + +  R+      E++  +   
Sbjct: 62  RNEFRALQKLQGLAVPK-VYAWEGN-----AVLMELIDAKELYRVRVENPDEVLDMILEE 115

Query: 141 LECL 144
           +   
Sbjct: 116 VAKF 119

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	156
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.94
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.93
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.93
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.92
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.92
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.92
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.92
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.91
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.91
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.91
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.91
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.91
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.91
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.91
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.91
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.91
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.91
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.9
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.9
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.9
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.9
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.9
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.9
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.9
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.89
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.89
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.89
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.88
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.88
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.88
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.88
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.88
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.88
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.88
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.87
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.87
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.86
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.86
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.86
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.86
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.86
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.86
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.86
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.86
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.86
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.85
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.85
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.85
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.85
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.84
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.84
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.83
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.83
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.83
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.81
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.81
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.8
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.8
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.78
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.78
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.77
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.63
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.59
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	95.01
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	88.64
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	84.4
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	83.73
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	82.86

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=1.8e-26  Score=160.42  Aligned_cols=129  Identities=25%  Similarity=0.428  Sum_probs=112.9

Q ss_pred             CChHHHHhhhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc---
Q 047548           22 YNYSDVKKMTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG---   97 (156)
Q Consensus        22 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---   97 (156)
                      +..+++......+.+.||+|+||.||+|.+.. +..||+|.++......+.+.+|+.++..++|+||+++++++...   
T Consensus         9 ~~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   88 (287)
T d1opja_           9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF   88 (287)
T ss_dssp             CCTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             CcccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCee
Confidence            34456666666778899999999999999875 88999999987666667899999999999999999999999876   


Q ss_pred             -eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 -LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 -lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       ++|||+++|+|.+++....     ...+++..+..++.|++.||.|||+++++|+||-
T Consensus        89 ~iv~E~~~~g~l~~~l~~~~-----~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlK  142 (287)
T d1opja_          89 YIITEFMTYGNLLDYLRECN-----RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA  142 (287)
T ss_dssp             EEEEECCTTCBHHHHHHHSC-----TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EEEeecccCcchHHHhhhcc-----ccchHHHHHHHHHHHHHHHHHHHHHCCcccCccc
Confidence             8999999999999997643     4558899999999999999999999999999984

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.2e-26  Score=158.82  Aligned_cols=126  Identities=20%  Similarity=0.335  Sum_probs=109.6

Q ss_pred             HHHHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc---eeee
Q 047548           25 SDVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG---LVYE  101 (156)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e  101 (156)
                      ++++.....+.+.||+|+||.||+|.++++..||+|.+.......+.+.+|+.++..++|+||+++++++...   ++||
T Consensus         8 wei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~E   87 (272)
T d1qpca_           8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITE   87 (272)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEE
T ss_pred             eecCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeeccCCeEEEEE
Confidence            3455556667789999999999999998788999999987666667899999999999999999999988766   9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++|+|.+++....     ...+++..+..++.|++.||.|||+++++|+||-
T Consensus        88 y~~~g~L~~~~~~~~-----~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiK  136 (272)
T d1qpca_          88 YMENGSLVDFLKTPS-----GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR  136 (272)
T ss_dssp             CCTTCBHHHHTTSHH-----HHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             eCCCCcHHHHHhhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccc
Confidence            999999999876432     3348899999999999999999999999999984

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.3e-25  Score=154.30  Aligned_cols=117  Identities=26%  Similarity=0.463  Sum_probs=105.2

Q ss_pred             hhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCCh
Q 047548           33 SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSL  108 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L  108 (156)
                      .+.+.||+|+||.||+|.+.++..||+|.+.......+.+.+|+.++..++|+||+++++++...    +++||+++|+|
T Consensus         8 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L   87 (263)
T d1sm2a_           8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL   87 (263)
T ss_dssp             EEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred             EEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcH
Confidence            45678999999999999988888899999987666668899999999999999999999999866    99999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        88 ~~~l~~~------~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlK  128 (263)
T d1sm2a_          88 SDYLRTQ------RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA  128 (263)
T ss_dssp             HHHHHTT------TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCS
T ss_pred             HHHhhcc------ccCCCHHHHHHHHHHHHHHHHhhhccceeecccc
Confidence            9998764      3457889999999999999999999999999984

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.9e-25  Score=154.42  Aligned_cols=121  Identities=26%  Similarity=0.387  Sum_probs=102.6

Q ss_pred             HHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc---eee
Q 047548           27 VKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG---LVY  100 (156)
Q Consensus        27 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~  100 (156)
                      ++.....+.+.||+|+||.||+|.++  ..||+|+++.....   .+.+.+|+.++..++|+||+++.+++..+   +++
T Consensus         5 i~~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv~   82 (276)
T d1uwha_           5 IPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVT   82 (276)
T ss_dssp             CCTTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEE
T ss_pred             cccccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEEEEEE
Confidence            33444556789999999999999865  36999999754322   26788999999999999999999988766   999


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++|+|.+++...      ...+++..+..++.|++.||.|||+++++|+||-
T Consensus        83 Ey~~~g~L~~~l~~~------~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlK  131 (276)
T d1uwha_          83 QWCEGSSLYHHLHII------ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK  131 (276)
T ss_dssp             ECCCEEEHHHHHHTS------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             ecCCCCCHHHHHhhc------cCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccC
Confidence            999999999999754      3448899999999999999999999999999984

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.7e-25  Score=150.61  Aligned_cols=117  Identities=26%  Similarity=0.457  Sum_probs=105.4

Q ss_pred             hhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCCCh
Q 047548           33 SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNGSL  108 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g~L  108 (156)
                      .+.++||+|+||.||+|.++++..||+|.++......+.+.+|+.++..++|+||+++++++...    +++||+++|++
T Consensus         7 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l   86 (258)
T d1k2pa_           7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL   86 (258)
T ss_dssp             CCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEH
T ss_pred             EEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCcH
Confidence            46678999999999999998788999999987766778899999999999999999999998876    89999999999


Q ss_pred             HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          109 HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+++...      ...+++..+..++.|++.||.|||+++++|+|+.
T Consensus        87 ~~~~~~~------~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk  127 (258)
T d1k2pa_          87 LNYLREM------RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA  127 (258)
T ss_dssp             HHHHHSG------GGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCS
T ss_pred             HHhhhcc------ccCCcHHHHHHHHHHHHHHHHHHhhcCccccccc
Confidence            9997654      3457889999999999999999999999999974

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.4e-25  Score=153.70  Aligned_cols=125  Identities=22%  Similarity=0.359  Sum_probs=109.7

Q ss_pred             HHHhhhhhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc---eeeec
Q 047548           26 DVKKMTNSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG---LVYEF  102 (156)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~  102 (156)
                      +++.....+.+.||+|+||+||+|..+++..||+|.+.......+.+.+|+.++..++|+||+++++++...   ++|||
T Consensus        13 ~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey   92 (285)
T d1fmka3          13 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEY   92 (285)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECC
T ss_pred             EcCHHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEecCCeEEEEEe
Confidence            455556677889999999999999998877899999987665667899999999999999999999998766   99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|++..++....     ...+++..++.++.|++.||.|||+++++|+||.
T Consensus        93 ~~~g~l~~~~~~~~-----~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlK  140 (285)
T d1fmka3          93 MSKGSLLDFLKGET-----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR  140 (285)
T ss_dssp             CTTCBHHHHHSHHH-----HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             cCCCchhhhhhhcc-----cccchHHHHHHHHHHHHHHHHHHhhhheeccccc
Confidence            99999999887532     3458999999999999999999999999999985

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.9e-25  Score=152.70  Aligned_cols=118  Identities=19%  Similarity=0.303  Sum_probs=103.4

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.+.||+|+||.||+|.... +..||+|.+...... .+.+.+|+.+++.++||||+++++++...    ++|||+++
T Consensus        14 Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~   93 (288)
T d2jfla1          14 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   93 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             eEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCC
Confidence            4556789999999999999865 889999998764333 36789999999999999999999998876    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+|.+++...      ...+++..+..++.|++.||.|||+++++|+||-
T Consensus        94 g~L~~~~~~~------~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiK  137 (288)
T d2jfla1          94 GAVDAVMLEL------ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK  137 (288)
T ss_dssp             EEHHHHHHHH------TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CcHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecC
Confidence            9999998654      3458899999999999999999999999999984

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=7.5e-25  Score=150.96  Aligned_cols=117  Identities=21%  Similarity=0.208  Sum_probs=100.7

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC--ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG--NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      +.+.+.||+|+||.||+|..+. +..||+|++.....  ..+.+.+|+.+++.++||||+++++++...    ++|||++
T Consensus         7 y~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~   86 (271)
T d1nvra_           7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS   86 (271)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccC
Confidence            3456789999999999999865 88999999875332  225689999999999999999999999887    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|+|.+++..       ...+++..+..++.|++.||.|||+++++|+||-
T Consensus        87 gg~L~~~l~~-------~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiK  130 (271)
T d1nvra_          87 GGELFDRIEP-------DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK  130 (271)
T ss_dssp             TEEGGGGSBT-------TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             CCcHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHHcCCccCccc
Confidence            9999999865       3458899999999999999999999999999984

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=2.2e-24  Score=150.60  Aligned_cols=117  Identities=23%  Similarity=0.455  Sum_probs=99.5

Q ss_pred             hhhhccccccCceEEEEEeCC-C---cEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-G---RVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~---~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      .+.++||+|+||.||+|..+. +   ..||+|.+.......  +.+.+|+.++..++||||+++++++...    ++|||
T Consensus        29 ~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey  108 (299)
T d1jpaa_          29 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEF  108 (299)
T ss_dssp             EEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             EEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEe
Confidence            445789999999999998753 2   368888887543322  5799999999999999999999999776    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+|.+++...      ...+++..+..++.|++.||.|||+++++|+||-
T Consensus       109 ~~~g~L~~~~~~~------~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlK  155 (299)
T d1jpaa_         109 MENGSLDSFLRQN------DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLA  155 (299)
T ss_dssp             CTTEEHHHHHHTT------TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             cCCCcceeeeccc------cCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccc
Confidence            9999999988764      3448899999999999999999999999999984

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.4e-24  Score=152.91  Aligned_cols=118  Identities=16%  Similarity=0.157  Sum_probs=104.2

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSNG  106 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~g  106 (156)
                      +.+.+.||+|+||.||+|.... +..+|+|.++....+...+.+|+.++..++|+||+++++++.+.    ++|||+++|
T Consensus         7 Y~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg   86 (321)
T d1tkia_           7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGL   86 (321)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCC
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCC
Confidence            4566799999999999999865 88999999986554456688999999999999999999998876    999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        87 ~L~~~i~~~------~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlK  129 (321)
T d1tkia_          87 DIFERINTS------AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIR  129 (321)
T ss_dssp             BHHHHHTSS------SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             cHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHcCCCccccc
Confidence            999999754      3348899999999999999999999999999984

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.3e-24  Score=150.81  Aligned_cols=116  Identities=25%  Similarity=0.416  Sum_probs=99.0

Q ss_pred             hhh-ccccccCceEEEEEeCC---CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc---eeeecCC
Q 047548           34 FSD-KVRQGGYGVVYRGKLHE---GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG---LVYEFMS  104 (156)
Q Consensus        34 ~~~-~lg~g~~g~v~~~~~~~---~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~~~  104 (156)
                      +.+ +||+|+||.||+|.++.   +..||+|.++.....  .+.+.+|+.++..++||||+++++++...   ++|||++
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~lvmE~~~   91 (285)
T d1u59a_          12 IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAG   91 (285)
T ss_dssp             EEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCT
T ss_pred             ECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCeEEEEEEeCC
Confidence            345 49999999999998653   557999998764322  26789999999999999999999998766   9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|+|.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        92 ~g~L~~~l~~~------~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlK  136 (285)
T d1u59a_          92 GGPLHKFLVGK------REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLA  136 (285)
T ss_dssp             TEEHHHHHTTC------TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CCcHHHHhhcc------ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCc
Confidence            99999998654      3458899999999999999999999999999985

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.2e-24  Score=149.12  Aligned_cols=113  Identities=23%  Similarity=0.398  Sum_probs=96.5

Q ss_pred             hccccccCceEEEEEeCC---CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc---eeeecCCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE---GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG---LVYEFMSNG  106 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~---~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~~~~g  106 (156)
                      ++||+|+||.||+|.+..   +..||+|.++....+   .+.+.+|+.++..++||||+++++++...   ++|||+++|
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvmE~~~~g   92 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG   92 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccCCEEEEEEcCCCC
Confidence            369999999999998643   468999998753322   25689999999999999999999998766   999999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        93 ~L~~~l~~~-------~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlK  134 (277)
T d1xbba_          93 PLNKYLQQN-------RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLA  134 (277)
T ss_dssp             EHHHHHHHC-------TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             cHHHHHhhc-------cCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCc
Confidence            999999763       448899999999999999999999999999984

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=3.2e-24  Score=150.17  Aligned_cols=118  Identities=20%  Similarity=0.277  Sum_probs=99.6

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.+.+.||+|+||.||+|..+. +..||+|++......  ...+.+|+.++..++||||+++++++.+.    ++|||+
T Consensus        10 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~   89 (307)
T d1a06a_          10 IYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV   89 (307)
T ss_dssp             TEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence            34667899999999999999765 889999998754322  24678999999999999999999999877    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||-
T Consensus        90 ~gg~L~~~l~~~-------~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiK  134 (307)
T d1a06a_          90 SGGELFDRIVEK-------GFYTERDASRLIFQVLDAVKYLHDLGIVHRDLK  134 (307)
T ss_dssp             CSCBHHHHHHTC-------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             CCCcHHHhhhcc-------cCCCHHHHHHHHHHHHHHHHhhhhceeeeEEec
Confidence            999999999753       448899999999999999999999999999983

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.7e-24  Score=148.94  Aligned_cols=116  Identities=22%  Similarity=0.310  Sum_probs=101.9

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCC-CChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM-GNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.+.||+|+||.||+|.... +..||+|.+.... ...+.+.+|+.+++.++||||+++++.+...    ++|||+++
T Consensus        22 Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~g  101 (293)
T d1yhwa1          22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG  101 (293)
T ss_dssp             BCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             cEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCC
Confidence            4556789999999999999755 8999999987543 2346789999999999999999999998877    99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+|.+++...        .+++..+..++.|++.||.|||+++++|+||-
T Consensus       102 g~L~~~~~~~--------~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiK  143 (293)
T d1yhwa1         102 GSLTDVVTET--------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIK  143 (293)
T ss_dssp             CBHHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CcHHHHhhcc--------CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCc
Confidence            9999987642        38899999999999999999999999999984

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=6e-24  Score=145.84  Aligned_cols=117  Identities=19%  Similarity=0.265  Sum_probs=102.4

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      +.+.+.||+|+||.||++..+. +..||+|++...    ....+.+.+|+.++..++||||+++++++.+.    ++|||
T Consensus         8 y~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy   87 (263)
T d2j4za1           8 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY   87 (263)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEee
Confidence            3456789999999999999865 889999998642    22336688999999999999999999999887    99999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||-
T Consensus        88 ~~~g~L~~~l~~~-------~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiK  133 (263)
T d2j4za1          88 APLGTVYRELQKL-------SKFDEQRTATYITELANALSYCHSKRVIHRDIK  133 (263)
T ss_dssp             CTTCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             cCCCcHHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeec
Confidence            9999999999763       348899999999999999999999999999984

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.5e-24  Score=148.56  Aligned_cols=119  Identities=18%  Similarity=0.287  Sum_probs=103.7

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC-------ChHHHHHHHHHHcCCCCCCccccceeeecc----
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG-------NGEEFINEVACISGTSHVNIVTPLGICCEG----   97 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----   97 (156)
                      ..+.+.+.||+|+||.||+|..+. +..||+|++.....       ..+.+.+|+.++..++|+||+++++++.+.    
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            345677899999999999999865 89999999864221       225689999999999999999999999887    


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|||+++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||-
T Consensus        90 iv~E~~~gg~L~~~i~~~-------~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiK  140 (293)
T d1jksa_          90 LILELVAGGELFDFLAEK-------ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLK  140 (293)
T ss_dssp             EEEECCCSCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             EEEEcCCCccccchhccc-------cccchhHHHHHHHHHHHHHHhhhhcceeecccc
Confidence            999999999999999764       348899999999999999999999999999984

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=7.4e-24  Score=145.88  Aligned_cols=116  Identities=22%  Similarity=0.290  Sum_probs=99.5

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc--------eee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG--------LVY  100 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~--------lv~  100 (156)
                      .+.++||+|+||.||+|.... +..||+|.+......   .+.+.+|+.+++.++||||+++++++...        ++|
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            355689999999999999865 889999998754322   25688999999999999999999987541        899


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA--TLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~--~~h~~i~  155 (156)
                      ||+++|+|.+++...       ..+++..+..++.|++.||.|||+++  ++|+||-
T Consensus        92 E~~~~g~L~~~l~~~-------~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiK  141 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRF-------KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLK  141 (270)
T ss_dssp             ECCCSCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCC
T ss_pred             eCCCCCcHHHHHhcc-------ccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcC
Confidence            999999999999763       34888999999999999999999998  9999984

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.90  E-value=7.2e-24  Score=150.76  Aligned_cols=119  Identities=23%  Similarity=0.316  Sum_probs=103.9

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .+.+.+.||+|+||.||+|.... +..||+|.+...... .+.+.+|+.++..++|+||+++++++...    ++|||++
T Consensus        27 ~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~  106 (350)
T d1koaa2          27 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS  106 (350)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence            45667899999999999999765 889999998754332 25688999999999999999999998877    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|+|.+++...      ...+++..+..++.|++.||.|||+++++|+||-
T Consensus       107 gg~L~~~l~~~------~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiK  151 (350)
T d1koaa2         107 GGELFEKVADE------HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLK  151 (350)
T ss_dssp             SCBHHHHHTCT------TSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             CCCHHHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeec
Confidence            99999998654      3458999999999999999999999999999984

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.90  E-value=7.5e-24  Score=150.78  Aligned_cols=119  Identities=19%  Similarity=0.280  Sum_probs=103.4

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC-hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .+.+.+.||+|+||.||+|.... +..||+|++...... .+.+.+|+.++..++|+||+++++++...    ++|||++
T Consensus        30 ~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~  109 (352)
T d1koba_          30 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS  109 (352)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence            34566899999999999999765 899999998764322 35688999999999999999999999877    9999999


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|+|.+++...      ...+++..+..++.|++.||.|||+++++|+||-
T Consensus       110 gg~L~~~~~~~------~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiK  154 (352)
T d1koba_         110 GGELFDRIAAE------DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIK  154 (352)
T ss_dssp             CCBHHHHTTCT------TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             CChHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence            99999987654      3458999999999999999999999999999984

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=1.1e-23  Score=147.50  Aligned_cols=118  Identities=20%  Similarity=0.255  Sum_probs=100.7

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh----HHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG----EEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~----~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      .....+.||+|+||.||+|.... +..||+|.+.......    +.+.+|+.++..++||||+++++++...    ++||
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            34455789999999999999765 8899999987643322    4688999999999999999999998876    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++|++..++..       ...+++..+..++.|++.||.|||+++++|+||-
T Consensus        96 ~~~~g~l~~~~~~-------~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiK  142 (309)
T d1u5ra_          96 YCLGSASDLLEVH-------KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVK  142 (309)
T ss_dssp             CCSEEHHHHHHHH-------TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCS
T ss_pred             ecCCCchHHHHHh-------CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCC
Confidence            9999988766654       3448899999999999999999999999999984

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.8e-24  Score=150.77  Aligned_cols=118  Identities=20%  Similarity=0.281  Sum_probs=102.1

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      ...+.+.||+|+||.||+|.... +..||+|.++.....  .+.+.+|+.+++.++||||+++++.+...    ++|||+
T Consensus         7 ~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~   86 (322)
T d1s9ja_           7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM   86 (322)
T ss_dssp             GEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             CCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            34456789999999999999765 889999998754322  25788999999999999999999999887    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAV-ATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~-~~~h~~i~  155 (156)
                      ++|+|.+++.+.       ..+++..+..++.|++.||.|||+. +++|+||-
T Consensus        87 ~gg~L~~~l~~~-------~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiK  132 (322)
T d1s9ja_          87 DGGSLDQVLKKA-------GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK  132 (322)
T ss_dssp             TTEEHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCS
T ss_pred             CCCcHHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccC
Confidence            999999999764       3488999999999999999999985 89999984

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5.1e-24  Score=146.64  Aligned_cols=122  Identities=16%  Similarity=0.190  Sum_probs=96.9

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc------eee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG------LVY  100 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~------lv~  100 (156)
                      .+.+.+.||+|+||.||++..+. +..||+|.+.......   +.+.+|+.++..++||||+++++.+.+.      ++|
T Consensus         5 dy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivm   84 (269)
T d2java1           5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM   84 (269)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEE
T ss_pred             hCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEE
Confidence            34566899999999999999765 8899999987654333   5688999999999999999999988642      899


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA-----TLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~-----~~h~~i~  155 (156)
                      ||+++|+|.+++.....   ....+++..++.++.|++.||.|||+.+     ++|+||.
T Consensus        85 Ey~~~g~L~~~i~~~~~---~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiK  141 (269)
T d2java1          85 EYCEGGDLASVITKGTK---ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK  141 (269)
T ss_dssp             ECCTTEEHHHHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CC
T ss_pred             ecCCCCcHHHHHHhccc---cCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCc
Confidence            99999999999864210   0345889999999999999999999976     9999984

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.7e-23  Score=144.35  Aligned_cols=124  Identities=19%  Similarity=0.317  Sum_probs=104.5

Q ss_pred             HHHhhhhhhhhccccccCceEEEEEeCC----CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc--
Q 047548           26 DVKKMTNSFSDKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG--   97 (156)
Q Consensus        26 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~--   97 (156)
                      +++.....+.+.||+|+||.||+|.+..    +..||+|.+.....+.  +.+.+|+.+++.++||||+++++++...  
T Consensus         3 ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~   82 (273)
T d1mp8a_           3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV   82 (273)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSC
T ss_pred             CcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCeE
Confidence            3445566777899999999999998753    3568889886543332  5689999999999999999999998766  


Q ss_pred             -eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 -LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 -lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       +++||+++|++.+++...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        83 ~iv~E~~~~g~l~~~~~~~------~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlK  135 (273)
T d1mp8a_          83 WIIMELCTLGELRSFLQVR------KYSLDLASLILYAYQLSTALAYLESKRFVHRDIA  135 (273)
T ss_dssp             EEEEECCTTEEHHHHHHHT------TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EEEEEeccCCcHHhhhhcc------CCCCCHHHHHHHHHHHHHHhhhhcccCeeccccc
Confidence             999999999999988764      3457899999999999999999999999999984

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.6e-24  Score=146.33  Aligned_cols=117  Identities=24%  Similarity=0.419  Sum_probs=100.3

Q ss_pred             hhhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc-----eeeecCCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG-----LVYEFMSNG  106 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----lv~e~~~~g  106 (156)
                      ..+.++||+|+||.||+|.++ +..||+|.++.. ...+.+.+|+.+++.++|+||+++++++...     +++||+++|
T Consensus         9 ~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g   86 (262)
T d1byga_           9 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG   86 (262)
T ss_dssp             EEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC-C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTE
T ss_pred             eEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCC
Confidence            346678999999999999985 678999999753 2447799999999999999999999988643     899999999


Q ss_pred             ChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          107 SLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       107 ~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|.+++....     ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        87 ~L~~~l~~~~-----~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlk  130 (262)
T d1byga_          87 SLVDYLRSRG-----RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLA  130 (262)
T ss_dssp             EHHHHHHHHH-----HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             CHHHHHHhcC-----CCCCCHHHHHHHHHHHHhhccccccCceeccccc
Confidence            9999996532     2347899999999999999999999999999985

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.5e-23  Score=145.51  Aligned_cols=118  Identities=17%  Similarity=0.169  Sum_probs=103.0

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      .+.+.+.||+|+||.||+|.... +..||+|++...    ....+.+.+|+.+++.++|+||+++++++.+.    ++||
T Consensus         9 dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmE   88 (288)
T d1uu3a_           9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS   88 (288)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEEC
T ss_pred             CCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEE
Confidence            35667899999999999999865 889999998642    22336789999999999999999999998876    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||-
T Consensus        89 y~~gg~L~~~~~~~-------~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiK  135 (288)
T d1uu3a_          89 YAKNGELLKYIRKI-------GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK  135 (288)
T ss_dssp             CCTTEEHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             ccCCCCHHHhhhcc-------CCCCHHHHHHHHHHHHHHHHhhccccEEcCcCC
Confidence            99999999998764       348899999999999999999999999999984

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=5.3e-23  Score=144.24  Aligned_cols=143  Identities=24%  Similarity=0.374  Sum_probs=114.4

Q ss_pred             hhCCCCCCCCCh---HHHHhhhhhhhhccccccCceEEEEEeC------CCcEEEEEecccCCCCh--HHHHHHHHHHcC
Q 047548           13 KYGSLAPKGYNY---SDVKKMTNSFSDKVRQGGYGVVYRGKLH------EGRVAAVKVLSESMGNG--EEFINEVACISG   81 (156)
Q Consensus        13 ~~~~~~~~~~~~---~~~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~a~k~~~~~~~~~--~~~~~e~~~l~~   81 (156)
                      .|....+..+++   ++++.....+.++||+|+||.||+|.+.      .+..||+|.++......  ..+.+|+.++..
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~   82 (311)
T d1t46a_           3 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY   82 (311)
T ss_dssp             TTCCCCTTTSCCCGGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHH
T ss_pred             CceeeCcccCCCcccccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHh
Confidence            455666776665   5677777778899999999999999863      25689999997644332  468899999998


Q ss_pred             C-CCCCccccceeeecc----eeeecCCCCChHHHhhhcCCC-----------CCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 047548           82 T-SHVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKGSM-----------STKNNRLEWTTLSEIVVGVARGLECLI  145 (156)
Q Consensus        82 l-~~~~i~~l~~~~~~~----lv~e~~~~g~L~~~l~~~~~~-----------~~~~~~~~~~~~~~i~~~i~~gl~yLH  145 (156)
                      + +|+||+++++.+...    ++|||+++|+|.+++......           ......+++..+..++.|++.||.|||
T Consensus        83 l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH  162 (311)
T d1t46a_          83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA  162 (311)
T ss_dssp             HCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            8 699999999999876    999999999999999764311           011235788999999999999999999


Q ss_pred             hcCCCCcccc
Q 047548          146 AVATLGLCIS  155 (156)
Q Consensus       146 ~~~~~h~~i~  155 (156)
                      +++++|+|+-
T Consensus       163 ~~~ivHrDLK  172 (311)
T d1t46a_         163 SKNCIHRDLA  172 (311)
T ss_dssp             HTTCCCSCCS
T ss_pred             hCCeeecccc
Confidence            9999999983

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=6e-23  Score=142.20  Aligned_cols=117  Identities=25%  Similarity=0.449  Sum_probs=99.9

Q ss_pred             hhhhccccccCceEEEEEeCC-C----cEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc----eeee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-G----RVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~----~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      .+.++||+|+||.||+|.++. +    ..||+|.+.......  ..+.+|+.++..++|+||+++++++...    +++|
T Consensus        10 ~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e   89 (283)
T d1mqba_          10 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITE   89 (283)
T ss_dssp             EEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             EeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEE
Confidence            456789999999999998754 2    478999987543332  4688999999999999999999999876    8999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+.++++.+.+...      ...+++..+..++.|++.||.|||+++++|+||-
T Consensus        90 ~~~~~~l~~~~~~~------~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlK  137 (283)
T d1mqba_          90 YMENGALDKFLREK------DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLA  137 (283)
T ss_dssp             CCTTEEHHHHHHHT------TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             ecccCcchhhhhcc------cccccHHHHHHHHHHHHHhhhhccccccccCccc
Confidence            99999999988764      3458899999999999999999999999999984

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.1e-23  Score=145.59  Aligned_cols=131  Identities=24%  Similarity=0.358  Sum_probs=102.6

Q ss_pred             HHHHhhhhhhhhccccccCceEEEEEeCC-C-----cEEEEEecccCCC--ChHHHHHHHHHHcCC-CCCCccccceeee
Q 047548           25 SDVKKMTNSFSDKVRQGGYGVVYRGKLHE-G-----RVAAVKVLSESMG--NGEEFINEVACISGT-SHVNIVTPLGICC   95 (156)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~-----~~~a~k~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~l~~~~~   95 (156)
                      ++++.....+.++||+|+||.||+|.... +     ..||+|.+.....  ....+.+|+.++..+ +|+||+++++++.
T Consensus        32 wei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~  111 (325)
T d1rjba_          32 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT  111 (325)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEe
Confidence            34555666778899999999999998643 2     3689998865322  236788999999887 8999999999998


Q ss_pred             cc----eeeecCCCCChHHHhhhcCCCC----------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           96 EG----LVYEFMSNGSLHKFIYDKGSMS----------------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        96 ~~----lv~e~~~~g~L~~~l~~~~~~~----------------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ..    ++|||+++|+|.+++......-                .....+++..+..++.|++.||.|||+++++|+||-
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlK  191 (325)
T d1rjba_         112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA  191 (325)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred             eCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCc
Confidence            77    9999999999999997642100                012347888999999999999999999999999984

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.3e-22  Score=143.51  Aligned_cols=116  Identities=16%  Similarity=0.158  Sum_probs=102.1

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.+.||+|+||.||++..+. +..+|+|++...    ....+.+.+|+.++..++||||+++.+.+.+.    ++|||+
T Consensus         8 ~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~   87 (337)
T d1o6la_           8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYA   87 (337)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceecc
Confidence            456789999999999999765 899999998742    22346788999999999999999999999887    899999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||-
T Consensus        88 ~gg~L~~~~~~~-------~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlK  132 (337)
T d1o6la_          88 NGGELFFHLSRE-------RVFTEERARFYGAEIVSALEYLHSRDVVYRDIK  132 (337)
T ss_dssp             TTCBHHHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCC
T ss_pred             CCCchhhhhhcc-------cCCcHHHHHHHHHHHhhhhhhhhhcCccccccC
Confidence            999999999864       347889999999999999999999999999984

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.88  E-value=8.2e-23  Score=141.10  Aligned_cols=117  Identities=16%  Similarity=0.180  Sum_probs=100.9

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC-h---HHHHHHHHHHcCCCCCCccccceeeecc--------e
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-G---EEFINEVACISGTSHVNIVTPLGICCEG--------L   98 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~--------l   98 (156)
                      +.+.+.||+|+||.||+|.... ++.||+|++...... .   +.+.+|+.++..++|+|++++++++...        +
T Consensus         9 Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~l   88 (277)
T d1o6ya_           9 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI   88 (277)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             eEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEE
Confidence            4566899999999999999754 889999999764322 2   4688999999999999999999887653        8


Q ss_pred             eeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           99 VYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        99 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +|||+++++|.+++...       ..+++..+..++.|++.||.|||+++++|+||-
T Consensus        89 vmE~~~g~~L~~~~~~~-------~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiK  138 (277)
T d1o6ya_          89 VMEYVDGVTLRDIVHTE-------GPMTPKRAIEVIADACQALNFSHQNGIIHRDVK  138 (277)
T ss_dssp             EEECCCEEEHHHHHHHH-------CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             EEECCCCCEehhhhccc-------CCCCHHHHHHHHHHHHHHHHHHHhCCccCcccc
Confidence            99999999999988764       348899999999999999999999999999984

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.6e-22  Score=140.65  Aligned_cols=117  Identities=26%  Similarity=0.451  Sum_probs=98.4

Q ss_pred             hhhhccccccCceEEEEEeCC----CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc-----eeee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG-----LVYE  101 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----lv~e  101 (156)
                      +|.++||+|+||+||+|.+..    ...||+|.+......  .+.+.+|+.++..++|+|++++++++...     +++|
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E  109 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP  109 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEE
Confidence            456789999999999998754    236889998753322  26799999999999999999999987643     8999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++|+|.+++...      ....++..++.++.|++.||.|||+.+++|+|+-
T Consensus       110 ~~~~g~l~~~~~~~------~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK  157 (311)
T d1r0pa_         110 YMKHGDLRNFIRNE------THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLA  157 (311)
T ss_dssp             CCTTCBHHHHHHCT------TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EeecCchhhhhccc------cccchHHHHHHHHHHHHHhhhhhcccCcccCCcc
Confidence            99999999998764      3446778889999999999999999999999984

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.88  E-value=1e-22  Score=140.59  Aligned_cols=117  Identities=21%  Similarity=0.245  Sum_probs=101.2

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh----------HHHHHHHHHHcCCC-CCCccccceeeecc--
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG----------EEFINEVACISGTS-HVNIVTPLGICCEG--   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~----------~~~~~e~~~l~~l~-~~~i~~l~~~~~~~--   97 (156)
                      +.+.+.||+|+||+||+|.... ++.+|+|++.......          +.+.+|+.++..++ |+|++++++++.+.  
T Consensus         5 y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~   84 (277)
T d1phka_           5 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF   84 (277)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcc
Confidence            3456789999999999999754 8899999987533211          24788999999996 99999999999887  


Q ss_pred             --eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 --LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 --lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                        ++|||+++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        85 ~~ivmE~~~~g~L~~~l~~~-------~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlk  137 (277)
T d1phka_          85 FFLVFDLMKKGELFDYLTEK-------VTLSEKETRKIMRALLEVICALHKLNIVHRDLK  137 (277)
T ss_dssp             EEEEEECCTTCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             eEEEEEcCCCchHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccccc
Confidence              999999999999999764       348899999999999999999999999999984

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.1e-22  Score=141.48  Aligned_cols=117  Identities=21%  Similarity=0.393  Sum_probs=99.0

Q ss_pred             hhhhccccccCceEEEEEeCC-Cc----EEEEEecccCC--CChHHHHHHHHHHcCCCCCCccccceeeecc---eeeec
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GR----VAAVKVLSESM--GNGEEFINEVACISGTSHVNIVTPLGICCEG---LVYEF  102 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~----~~a~k~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e~  102 (156)
                      .+.++||+|+||.||+|.+.. +.    .||+|.+....  ...+.+.+|+.++..++||||+++++++...   +++++
T Consensus        12 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v~e~   91 (317)
T d1xkka_          12 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQL   91 (317)
T ss_dssp             EEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEEC
T ss_pred             EEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeeEEEEe
Confidence            445799999999999998754 33    68888886532  2336799999999999999999999999887   88999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +.+|+|.+++...      ...+++..+..++.|++.||.|||+++++|+||-
T Consensus        92 ~~~~~l~~~~~~~------~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlK  138 (317)
T d1xkka_          92 MPFGCLLDYVREH------KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA  138 (317)
T ss_dssp             CTTCBHHHHHHHT------SSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             ccCCccccccccc------ccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcch
Confidence            9999999988765      4558899999999999999999999999999984

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=2.7e-22  Score=140.81  Aligned_cols=116  Identities=19%  Similarity=0.241  Sum_probs=101.0

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFM  103 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~  103 (156)
                      .+.+.||+|+||.||++..+. +..||+|++...    ....+.+.+|+.++..++||||+++++++...    ++|||+
T Consensus         7 ~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~   86 (316)
T d1fota_           7 QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYI   86 (316)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeeec
Confidence            456789999999999999765 899999998642    22346788999999999999999999999887    999999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|++.+++...       ..++......++.|++.||.|||+++++|+||-
T Consensus        87 ~gg~l~~~~~~~-------~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiK  131 (316)
T d1fota_          87 EGGELFSLLRKS-------QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLK  131 (316)
T ss_dssp             CSCBHHHHHHHT-------SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCC
T ss_pred             CCcccccccccc-------ccccccHHHHHHHHHHHhhhhhccCcEEccccC
Confidence            999999988763       347788888999999999999999999999984

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=9.9e-23  Score=140.43  Aligned_cols=117  Identities=26%  Similarity=0.365  Sum_probs=92.5

Q ss_pred             hhhhccccccCceEEEEEeCC----CcEEEEEecccCCC--C--hHHHHHHHHHHcCCCCCCccccceeeecc---eeee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE----GRVAAVKVLSESMG--N--GEEFINEVACISGTSHVNIVTPLGICCEG---LVYE  101 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~----~~~~a~k~~~~~~~--~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~---lv~e  101 (156)
                      .+.+.||+|+||.||+|.+..    ...||+|.+.....  .  .+.+.+|+.++..++|+||+++++++.++   +++|
T Consensus        11 ~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~~~lv~e   90 (273)
T d1u46a_          11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTE   90 (273)
T ss_dssp             EEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEE
T ss_pred             EEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecchheeee
Confidence            456789999999999998643    24789999875322  1  25789999999999999999999999877   8999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++|++.+.+...      ...+++..+..++.|++.||.|||+++++|+||.
T Consensus        91 ~~~~~~l~~~~~~~------~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDik  138 (273)
T d1u46a_          91 LAPLGSLLDRLRKH------QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLA  138 (273)
T ss_dssp             CCTTCBHHHHHHHH------GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             eecCcchhhhhhcc------cCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeec
Confidence            99999999988764      3458899999999999999999999999999985

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.5e-22  Score=140.47  Aligned_cols=117  Identities=15%  Similarity=0.212  Sum_probs=99.3

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHc-CCCCCCccccceeeecc----eeee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACIS-GTSHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~-~l~~~~i~~l~~~~~~~----lv~e  101 (156)
                      +.+.++||+|+||.||+|.... ++.||+|++...    ....+.+..|..++. .++||||+++++++...    ++||
T Consensus         4 y~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmE   83 (320)
T d1xjda_           4 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME   83 (320)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEe
Confidence            3456899999999999999865 899999999642    223355677777665 68999999999999887    9999


Q ss_pred             cCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        84 y~~~g~L~~~i~~~-------~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDik  130 (320)
T d1xjda_          84 YLNGGDLMYHIQSC-------HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLK  130 (320)
T ss_dssp             CCTTCBHHHHHHHH-------SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCC
T ss_pred             ecCCCcHHHHhhcc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCc
Confidence            99999999999764       347889999999999999999999999999984

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=8.2e-22  Score=140.08  Aligned_cols=117  Identities=16%  Similarity=0.169  Sum_probs=102.0

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccC----CCChHHHHHHHHHHcCCCCCCccccceeeecc----eeeec
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSES----MGNGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEF  102 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~  102 (156)
                      ..+.+.||+|+||.||+|..+. +..||+|++...    ....+.+.+|+.++..++|+||+++++.+...    +++||
T Consensus        43 y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~  122 (350)
T d1rdqe_          43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY  122 (350)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccccc
Confidence            4556789999999999999865 899999998642    22336789999999999999999999998877    89999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +.+|+|.+.+...       ..+++..+..++.|++.||.|||+++++|+||-
T Consensus       123 ~~~g~l~~~l~~~-------~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIK  168 (350)
T d1rdqe_         123 VAGGEMFSHLRRI-------GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK  168 (350)
T ss_dssp             CTTCBHHHHHHHH-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             ccccchhhhHhhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCC
Confidence            9999999999764       348899999999999999999999999999984

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=9.2e-22  Score=137.09  Aligned_cols=117  Identities=24%  Similarity=0.366  Sum_probs=96.5

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .+.+.||+|+||.||+|.... +..||+|++.....   ..+.+.+|+.+++.++|+||+++++++...    +++||+.
T Consensus         5 ~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~   84 (298)
T d1gz8a_           5 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH   84 (298)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             EeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecC
Confidence            345789999999999999755 88999999865332   236788999999999999999999999887    8999996


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      + ++.+++....     ...+++..+..++.|++.||.|||+++++|+||-
T Consensus        85 ~-~~~~~~~~~~-----~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiK  129 (298)
T d1gz8a_          85 Q-DLKKFMDASA-----LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLK  129 (298)
T ss_dssp             E-EHHHHHHHTT-----TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             C-chhhhhhhhc-----ccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccC
Confidence            5 5555554322     4558999999999999999999999999999984

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=8.3e-22  Score=137.38  Aligned_cols=131  Identities=21%  Similarity=0.345  Sum_probs=100.8

Q ss_pred             HHHHhhhhhhhhccccccCceEEEEEeCC--------CcEEEEEecccCCCCh--HHHHHHHHHHcCC-CCCCcccccee
Q 047548           25 SDVKKMTNSFSDKVRQGGYGVVYRGKLHE--------GRVAAVKVLSESMGNG--EEFINEVACISGT-SHVNIVTPLGI   93 (156)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~--------~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l-~~~~i~~l~~~   93 (156)
                      ++++.....+.+.||+|+||.||++....        +..||+|.++......  ..+.+|...+..+ +|+||++++++
T Consensus         8 ~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~   87 (299)
T d1fgka_           8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA   87 (299)
T ss_dssp             TBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccc
Confidence            55666667778899999999999998533        2478999997654333  5678888888877 89999999999


Q ss_pred             eecc----eeeecCCCCChHHHhhhcCCC---------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           94 CCEG----LVYEFMSNGSLHKFIYDKGSM---------STKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        94 ~~~~----lv~e~~~~g~L~~~l~~~~~~---------~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +...    ++|||+++|+|.+++......         ......+++..++.++.|++.||.|||+++++|+||.
T Consensus        88 ~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiK  162 (299)
T d1fgka_          88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA  162 (299)
T ss_dssp             ECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             cccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeec
Confidence            9877    899999999999999754311         0113457899999999999999999999999999985

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.86  E-value=1.1e-21  Score=136.97  Aligned_cols=128  Identities=24%  Similarity=0.393  Sum_probs=103.3

Q ss_pred             HhhhhhhhhccccccCceEEEEEeCC------CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeecc--
Q 047548           28 KKMTNSFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCEG--   97 (156)
Q Consensus        28 ~~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~~--   97 (156)
                      +.....+.+.||+|+||.||+|.+++      +..||+|.+.......  +.+.+|+.+++.++|+|++++.+.+...  
T Consensus        11 p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~   90 (301)
T d1lufa_          11 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP   90 (301)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred             CHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCc
Confidence            44445667899999999999998642      4689999987543332  5699999999999999999999999876  


Q ss_pred             --eeeecCCCCChHHHhhhcCCC-----------------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 --LVYEFMSNGSLHKFIYDKGSM-----------------STKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 --lv~e~~~~g~L~~~l~~~~~~-----------------~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                        +++|++++|+|.+++......                 ......+++..+..++.|++.||+|||+++++|+||.
T Consensus        91 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlK  167 (301)
T d1lufa_          91 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLA  167 (301)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             eEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEc
Confidence              999999999999999753210                 0012347788999999999999999999999999984

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=6.1e-22  Score=140.02  Aligned_cols=111  Identities=19%  Similarity=0.196  Sum_probs=94.8

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHc-CCCCCCccccceeeec-----c---eeeecCCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACIS-GTSHVNIVTPLGICCE-----G---LVYEFMSN  105 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~-~l~~~~i~~l~~~~~~-----~---lv~e~~~~  105 (156)
                      ++||+|+||.||+|.... +..||+|.+..    .....+|+.++. ..+|+|++++++++.+     .   ++|||+++
T Consensus        18 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~g   93 (335)
T d2ozaa1          18 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG   93 (335)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred             EEeeeccCeEEEEEEECCCCCEEEEEEECC----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCC
Confidence            469999999999999755 88999999853    345678888765 4589999999998754     1   99999999


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+|.+++...+     ...+++..+..++.|++.||.|||+++++|+||-
T Consensus        94 g~L~~~i~~~~-----~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiK  138 (335)
T d2ozaa1          94 GELFSRIQDRG-----DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK  138 (335)
T ss_dssp             EEHHHHHHSCS-----CCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CcHHHHHHhcC-----CCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccc
Confidence            99999997643     3568999999999999999999999999999984

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=7e-22  Score=138.35  Aligned_cols=124  Identities=24%  Similarity=0.442  Sum_probs=99.3

Q ss_pred             hhhhhccccccCceEEEEEeCC-Cc--EEEEEecccCC--CChHHHHHHHHHHcCC-CCCCccccceeeecc----eeee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GR--VAAVKVLSESM--GNGEEFINEVACISGT-SHVNIVTPLGICCEG----LVYE  101 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~--~~a~k~~~~~~--~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~----lv~e  101 (156)
                      ..+.++||+|+||.||+|.++. +.  .||+|.+....  ...+.+.+|+.++..+ +|+||+++++++...    +++|
T Consensus        12 ~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~e   91 (309)
T d1fvra_          12 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE   91 (309)
T ss_dssp             CEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEE
Confidence            3456789999999999999764 43  56778775432  2336799999999998 799999999999877    9999


Q ss_pred             cCCCCChHHHhhhcCCC---------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          102 FMSNGSLHKFIYDKGSM---------STKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       102 ~~~~g~L~~~l~~~~~~---------~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      |+++|+|.+++......         ......+++..+..++.|++.||.|+|+++++|+|+.
T Consensus        92 y~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlk  154 (309)
T d1fvra_          92 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLA  154 (309)
T ss_dssp             CCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             ecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccc
Confidence            99999999999653100         0113568899999999999999999999999999985

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=6e-22  Score=138.06  Aligned_cols=113  Identities=19%  Similarity=0.255  Sum_probs=93.5

Q ss_pred             hccccccCceEEEEEeCC-CcEEEEEecccCCCC------hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           36 DKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN------GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        36 ~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~------~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      ++||+|+||+||+|..+. ++.||+|++......      .+.+.+|+.++..++|+||+++++++...    ++|||+.
T Consensus         4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~   83 (299)
T d1ua2a_           4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME   83 (299)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS
T ss_pred             eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhc
Confidence            579999999999999765 899999998753211      14688999999999999999999999887    9999998


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++..+...       ...+++..+..++.|++.||.|||+++++|+||-
T Consensus        84 ~~~~~~~~~~-------~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiK  127 (299)
T d1ua2a_          84 TDLEVIIKDN-------SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLK  127 (299)
T ss_dssp             EEHHHHHTTC-------CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             chHHhhhhhc-------ccCCCHHHHHHHHHHHHHHHHHhhccceecccCC
Confidence            8766655433       3457888999999999999999999999999984

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=8.8e-22  Score=137.78  Aligned_cols=131  Identities=21%  Similarity=0.351  Sum_probs=105.1

Q ss_pred             HHHHhhhhhhhhccccccCceEEEEEeCC------CcEEEEEecccCCCCh--HHHHHHHHHHcCCCCCCccccceeeec
Q 047548           25 SDVKKMTNSFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGNG--EEFINEVACISGTSHVNIVTPLGICCE   96 (156)
Q Consensus        25 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~l~~~~~~   96 (156)
                      ++++.....+.+.||+|+||.||+|.+..      +..||+|.++......  ..+.+|+.++..++|+|++++.+.+..
T Consensus        15 ~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~   94 (308)
T d1p4oa_          15 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ   94 (308)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS
T ss_pred             eeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEec
Confidence            45555556677899999999999998642      5689999997543322  458899999999999999999999876


Q ss_pred             c----eeeecCCCCChHHHhhhcCCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           97 G----LVYEFMSNGSLHKFIYDKGSM---STKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        97 ~----lv~e~~~~g~L~~~l~~~~~~---~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .    +++||+++|+|.+++......   .......++..+..++.|++.||.|||+++++|+||.
T Consensus        95 ~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk  160 (308)
T d1p4oa_          95 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLA  160 (308)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCS
T ss_pred             CCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEc
Confidence            5    899999999999998643100   0012346788999999999999999999999999985

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.86  E-value=1.5e-21  Score=135.22  Aligned_cols=116  Identities=21%  Similarity=0.262  Sum_probs=98.1

Q ss_pred             hhhhccccccCceEEEEEeCCCcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      .+.++||+|+||+||+|..+.++.||+|.+......   .+.+.+|+.++..++|+|++++.+.+...    ++++++.+
T Consensus         5 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~   84 (286)
T d1ob3a_           5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ   84 (286)
T ss_dssp             EEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE
T ss_pred             eeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehh
Confidence            345789999999999999888899999998754322   36789999999999999999999999887    88888877


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +.+..+...       ...+++..+..++.|++.||.|||+.+++|+||-
T Consensus        85 ~~~~~~~~~-------~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiK  127 (286)
T d1ob3a_          85 DLKKLLDVC-------EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK  127 (286)
T ss_dssp             EHHHHHHTS-------TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             hhHHHHHhh-------cCCcchhhhHHHHHHHHHHHHHhccCcEEecCCC
Confidence            555554433       4558999999999999999999999999999984

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.85  E-value=2e-21  Score=138.74  Aligned_cols=116  Identities=17%  Similarity=0.210  Sum_probs=96.7

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCC----CChHHHH---HHHHHHcCCCCCCccccceeeecc----eee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESM----GNGEEFI---NEVACISGTSHVNIVTPLGICCEG----LVY  100 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~----~~~~~~~---~e~~~l~~l~~~~i~~l~~~~~~~----lv~  100 (156)
                      .+.+.||+|+||.||+|.... +..||+|++....    .....+.   .++.++..+.||||+++.+++...    ++|
T Consensus         7 ~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivm   86 (364)
T d1omwa3           7 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL   86 (364)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEEE
Confidence            456789999999999999865 8999999986421    1122233   346778888999999999998886    999


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||+++|+|.+++...       ..+++..+..++.|++.||.|||+++++|+||-
T Consensus        87 E~~~gg~L~~~l~~~-------~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlK  134 (364)
T d1omwa3          87 DLMNGGDLHYHLSQH-------GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLK  134 (364)
T ss_dssp             CCCCSCBHHHHHHHH-------CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             EecCCCcHHHHHHhc-------ccccHHHHHHHHHHHHHHHHHHHHCCccceeec
Confidence            999999999999764       347889999999999999999999999999984

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.2e-21  Score=137.66  Aligned_cols=116  Identities=16%  Similarity=0.181  Sum_probs=95.6

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC--hHHHHHHHHHHcCCCCCCccccceeeecc--------eee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN--GEEFINEVACISGTSHVNIVTPLGICCEG--------LVY  100 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~l~~~~~~~--------lv~  100 (156)
                      +.+.+.||+|+||+||+|.... +..||+|.+......  .+.+.+|+.++..++|+|++++.+.+...        +++
T Consensus        10 Y~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~   89 (345)
T d1pmea_          10 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLV   89 (345)
T ss_dssp             EEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEE
T ss_pred             eEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEE
Confidence            4456789999999999998754 899999998754322  25788999999999999999999988653        566


Q ss_pred             ecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++.+|+|.+++...        .+++..+..++.|++.||.|||+++++|+||-
T Consensus        90 ~~~~~g~L~~~l~~~--------~l~~~~i~~i~~qil~al~yLH~~~iiHRDIK  136 (345)
T d1pmea_          90 THLMGADLYKLLKTQ--------HLSNDHICYFLYQILRGLKYIHSANVLHRDLK  136 (345)
T ss_dssp             EECCCEEHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             EeecCCchhhhhhcC--------CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCC
Confidence            778899999999743        38899999999999999999999999999984

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=5.8e-21  Score=135.51  Aligned_cols=117  Identities=17%  Similarity=0.218  Sum_probs=99.3

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc---------
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG---------   97 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~---------   97 (156)
                      ++.+.+.||+|+||+||+|.... +..||+|++.....+.   +.+.+|+.++..++|+|++++.+++...         
T Consensus        19 rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~   98 (348)
T d2gfsa1          19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV   98 (348)
T ss_dssp             TEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCC
T ss_pred             CeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceE
Confidence            34556789999999999999754 8999999997644333   4688999999999999999999887532         


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++++.+|+|.+++..        ..+++..+..++.|++.||.|||+++++|+||-
T Consensus        99 ~i~~~~~gg~L~~~~~~--------~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiK  148 (348)
T d2gfsa1          99 YLVTHLMGADLNNIVKC--------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLK  148 (348)
T ss_dssp             EEEEECCSEEHHHHHTT--------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             EEEEeecCCchhhhccc--------ccccHHHHHHHHHHHHHHHHHHHhCCCcccccC
Confidence            67788889999999863        348999999999999999999999999999984

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.1e-21  Score=135.29  Aligned_cols=132  Identities=21%  Similarity=0.321  Sum_probs=99.9

Q ss_pred             hHHHHhhhhhhhhccccccCceEEEEEeCC------CcEEEEEecccCCCC--hHHHHHHHHHHcCC-CCCCccccceee
Q 047548           24 YSDVKKMTNSFSDKVRQGGYGVVYRGKLHE------GRVAAVKVLSESMGN--GEEFINEVACISGT-SHVNIVTPLGIC   94 (156)
Q Consensus        24 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~a~k~~~~~~~~--~~~~~~e~~~l~~l-~~~~i~~l~~~~   94 (156)
                      .++++.....+.+.||+|+||.||+|....      ++.||+|.+......  .+.+..|...+..+ +|+|++.+.+.+
T Consensus         7 ~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~   86 (299)
T d1ywna1           7 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC   86 (299)
T ss_dssp             HHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeee
Confidence            345666667778899999999999998642      458999998754332  25677777777766 789999998887


Q ss_pred             ecc-----eeeecCCCCChHHHhhhcCCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           95 CEG-----LVYEFMSNGSLHKFIYDKGSMS---------TKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        95 ~~~-----lv~e~~~~g~L~~~l~~~~~~~---------~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ...     ++|||+++|+|.+++.......         .....+++..+..++.|++.||.|||+++++|+||-
T Consensus        87 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlK  161 (299)
T d1ywna1          87 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA  161 (299)
T ss_dssp             CSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             ccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCC
Confidence            654     8999999999999997542100         012347889999999999999999999999999984

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=7.2e-21  Score=131.94  Aligned_cols=116  Identities=21%  Similarity=0.280  Sum_probs=99.5

Q ss_pred             hhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC---hHHHHHHHHHHcCCCCCCccccceeeecc----eeeecCC
Q 047548           33 SFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN---GEEFINEVACISGTSHVNIVTPLGICCEG----LVYEFMS  104 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----lv~e~~~  104 (156)
                      .+.+.||+|+||+||+|.... +..||+|+++.....   ...+.+|+.+++.++|+|++++.+.+...    ++++++.
T Consensus         5 ~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~   84 (292)
T d1unla_           5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD   84 (292)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCS
T ss_pred             EeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeecc
Confidence            345789999999999999765 889999998654322   25788999999999999999999999887    8899998


Q ss_pred             CCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          105 NGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       105 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++++..++..       ...+++..+..++.|++.||.|||+++++|+||-
T Consensus        85 ~~~l~~~~~~-------~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiK  128 (292)
T d1unla_          85 QDLKKYFDSC-------NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLK  128 (292)
T ss_dssp             EEHHHHHHHT-------TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             cccccccccc-------ccccchhHHHHHHHHHHHHHHHhhcCCEeeeccc
Confidence            8888877764       3457889999999999999999999999999984

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.84  E-value=6.8e-21  Score=134.21  Aligned_cols=112  Identities=16%  Similarity=0.240  Sum_probs=96.0

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCC-CCCCccccceeeecc------eeeecC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGT-SHVNIVTPLGICCEG------LVYEFM  103 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~l~~~~~~~------lv~e~~  103 (156)
                      ..+.+.||+|+||+||+|.... +..||+|+++..  ..+.+.+|+.++..+ .|+|++++.+.+...      ++|||+
T Consensus        37 y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~--~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~  114 (328)
T d3bqca1          37 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV  114 (328)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECC
T ss_pred             eEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH--HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeec
Confidence            4456789999999999999755 899999998643  456788999999998 499999999988643      899999


Q ss_pred             CCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          104 SNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       104 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      .+++|..+.          ..+++..+..++.|++.||.|||+++++|+||-
T Consensus       115 ~~~~L~~~~----------~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiK  156 (328)
T d3bqca1         115 NNTDFKQLY----------QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVK  156 (328)
T ss_dssp             CSCBGGGTT----------TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CCCcHHHHh----------cCCCHHHHHHHHHHHHHHHHHHhhccccccccc
Confidence            999987653          237899999999999999999999999999984

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=8.4e-21  Score=132.48  Aligned_cols=112  Identities=22%  Similarity=0.345  Sum_probs=92.2

Q ss_pred             hhhhccccccCceEEEEEeCCCcEEEEEecccCCCChHHHHH--HHHHHcCCCCCCccccceeeecc--------eeeec
Q 047548           33 SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFIN--EVACISGTSHVNIVTPLGICCEG--------LVYEF  102 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~--e~~~l~~l~~~~i~~l~~~~~~~--------lv~e~  102 (156)
                      .+.+.||+|+||.||+|.+. +..||+|.+....  .+.+..  |+..+..++|+||+++++++...        ++|||
T Consensus         6 ~l~~~iG~G~fg~Vy~~~~~-g~~vAvK~~~~~~--~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey   82 (303)
T d1vjya_           6 VLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             EEEEEEECCSSSEEEEEEET-TEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             EEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccc--hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEec
Confidence            45678999999999999874 7899999986432  233334  44455578999999999998753        89999


Q ss_pred             CCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh--------cCCCCcccc
Q 047548          103 MSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA--------VATLGLCIS  155 (156)
Q Consensus       103 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~--------~~~~h~~i~  155 (156)
                      +++|+|.++++..        .+++..+..++.|++.||.|+|+        ++++|+||.
T Consensus        83 ~~~g~L~~~l~~~--------~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlK  135 (303)
T d1vjya_          83 HEHGSLFDYLNRY--------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK  135 (303)
T ss_dssp             CTTCBHHHHHHHC--------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCC
T ss_pred             ccCCCHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccC
Confidence            9999999999753        37889999999999999999996        589999985

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.3e-20  Score=133.58  Aligned_cols=116  Identities=21%  Similarity=0.273  Sum_probs=91.6

Q ss_pred             hhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc---------
Q 047548           31 TNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG---------   97 (156)
Q Consensus        31 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~---------   97 (156)
                      ++.+.+.||+|+||.||+|.... ++.||+|.+.......   +.+.+|+.+++.++|+|++++.+++...         
T Consensus        19 ~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~   98 (346)
T d1cm8a_          19 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF   98 (346)
T ss_dssp             SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred             cEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceE
Confidence            34556789999999999999765 8999999997543332   5688999999999999999999987643         


Q ss_pred             -eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 -LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 -lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                       ++|||+ +.+|..+++.        ..+++..+..++.|++.||.|||+++++|+||-
T Consensus        99 ~lv~e~~-~~~l~~~~~~--------~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiK  148 (346)
T d1cm8a_          99 YLVMPFM-GTDLGKLMKH--------EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLK  148 (346)
T ss_dssp             EEEEECC-SEEHHHHHHH--------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             EEEEecc-cccHHHHHHh--------ccccHHHHHHHHHHHHHHHHHHHhCCCcccccC
Confidence             899998 5577777653        348999999999999999999999999999984

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=7.5e-21  Score=135.12  Aligned_cols=116  Identities=18%  Similarity=0.238  Sum_probs=92.3

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc----------eee
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG----------LVY  100 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------lv~  100 (156)
                      +...++||+|+||+||+|.... ++.||+|.+.....   ...+|+.+++.++|+|++++.+++...          ++|
T Consensus        22 Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~   98 (350)
T d1q5ka_          22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL   98 (350)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEE
T ss_pred             cEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch---HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEE
Confidence            3445689999999999999865 89999999875432   234789999999999999999887432          899


Q ss_pred             ecCCCCChHHHhhh-cCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          101 EFMSNGSLHKFIYD-KGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       101 e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ||++++ +...+.. ...    ...+++..+..++.|++.||.|||+++++|+||-
T Consensus        99 Ey~~~~-~~~~l~~~~~~----~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiK  149 (350)
T d1q5ka_          99 DYVPET-VYRVARHYSRA----KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK  149 (350)
T ss_dssp             ECCSEE-HHHHHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCC
T ss_pred             eccCCc-cHHHHHhhhhc----cCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence            999765 4444432 111    4558899999999999999999999999999983

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=9.3e-21  Score=130.47  Aligned_cols=117  Identities=19%  Similarity=0.194  Sum_probs=97.0

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCC-------hHHHHHHHHHHcCCC--CCCccccceeeecc----
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGN-------GEEFINEVACISGTS--HVNIVTPLGICCEG----   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~-------~~~~~~e~~~l~~l~--~~~i~~l~~~~~~~----   97 (156)
                      +.+.+.||+|+||.||+|.... +..||+|.+......       ...+.+|+.++..++  |+|++++++++...    
T Consensus         6 Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~   85 (273)
T d1xwsa_           6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFV   85 (273)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEE
T ss_pred             EEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEE
Confidence            4566789999999999999765 899999998643211       134678999998875  89999999999886    


Q ss_pred             eeeecCCC-CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSN-GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++|++.+ +++.+++...       ..+++..+..++.|++.||.|||+++++|+||.
T Consensus        86 lv~e~~~~~~~l~~~~~~~-------~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiK  137 (273)
T d1xwsa_          86 LILERPEPVQDLFDFITER-------GALQEELARSFFWQVLEAVRHCHNCGVLHRDIK  137 (273)
T ss_dssp             EEEECCSSEEEHHHHHHHH-------CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             EEEEeccCcchHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCc
Confidence            89999876 5777877653       348899999999999999999999999999984

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=6.4e-20  Score=128.65  Aligned_cols=119  Identities=17%  Similarity=0.223  Sum_probs=94.8

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCC---ChHHHHHHHHHHcCCCCCCccccceeeecc--------
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMG---NGEEFINEVACISGTSHVNIVTPLGICCEG--------   97 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~--------   97 (156)
                      .++.+.+.||+|+||+||+|.... ++.||+|++.....   ....+.+|+.++..++|+|++++.+.+...        
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            345566899999999999999764 89999999865322   236788999999999999999998887542        


Q ss_pred             ----eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 ----LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 ----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                          +++|++.++.+......       ...++...+..++.|++.||.|||+++++|+||-
T Consensus        90 ~~~~iv~e~~~~~~~~~~~~~-------~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlK  144 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLSNV-------LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMK  144 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHTCT-------TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             ceEEEEEeccCCCccchhhhc-------ccccccHHHHHHHHHHHHHHHHhccCCEEecCcC
Confidence                89999987655443332       3457889999999999999999999999999984

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=7.4e-20  Score=127.59  Aligned_cols=118  Identities=21%  Similarity=0.327  Sum_probs=91.5

Q ss_pred             hhhhhccccccCceEEEEEeC-C-CcEEEEEecccCCC---ChHHHHHHHHHHcCC---CCCCccccceeeecc------
Q 047548           32 NSFSDKVRQGGYGVVYRGKLH-E-GRVAAVKVLSESMG---NGEEFINEVACISGT---SHVNIVTPLGICCEG------   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~-~-~~~~a~k~~~~~~~---~~~~~~~e~~~l~~l---~~~~i~~l~~~~~~~------   97 (156)
                      +.+.+.||+|+||.||+|... . ++.||+|.+.....   ....+.+|+.+++.+   +|+|++++++++...      
T Consensus         9 Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~   88 (305)
T d1blxa_           9 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET   88 (305)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE
T ss_pred             EEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCc
Confidence            455678999999999999874 3 66799999865322   224566777776654   799999999887531      


Q ss_pred             ---eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 ---LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 ---lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                         +++|++.++.+.......      ...+++..+..++.|++.||.|||+++++|+||-
T Consensus        89 ~~~~~~e~~~~~~~~~~~~~~------~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiK  143 (305)
T d1blxa_          89 KLTLVFEHVDQDLTTYLDKVP------EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLK  143 (305)
T ss_dssp             EEEEEEECCSCBHHHHHHHSC------TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             eEEEEEEeccCCchhhhhhcc------CCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCC
Confidence               899999886655444332      4558889999999999999999999999999984

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.9e-19  Score=128.04  Aligned_cols=114  Identities=21%  Similarity=0.268  Sum_probs=92.8

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCCh---HHHHHHHHHHcCCCCCCccccceeeecc----------
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNG---EEFINEVACISGTSHVNIVTPLGICCEG----------   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~l~~~~~~~----------   97 (156)
                      +.+.++||+|+||+||+|.... +..||+|++.....+.   +.+.+|+.++..++|+|++++.+++...          
T Consensus        19 Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~   98 (355)
T d2b1pa1          19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY   98 (355)
T ss_dssp             EEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEE
T ss_pred             eEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeE
Confidence            3445789999999999999765 8999999997644333   4578999999999999999999988531          


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|||+.+ ++.+.+.         ..+++..+..++.|++.||.|||+++++|+|+-
T Consensus        99 iv~Ey~~~-~l~~~~~---------~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlK  146 (355)
T d2b1pa1          99 LVMELMDA-NLCQVIQ---------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK  146 (355)
T ss_dssp             EEEECCSE-EHHHHHT---------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             EEEeccch-HHHHhhh---------cCCCHHHHHHHHHHHHHHHHHhhhcccccccCC
Confidence            89999966 5555553         237889999999999999999999999999983

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1e-19  Score=127.86  Aligned_cols=117  Identities=19%  Similarity=0.225  Sum_probs=98.7

Q ss_pred             hhhhhccccccCceEEEEEeC----CCcEEEEEecccCC-----CChHHHHHHHHHHcCCCC-CCccccceeeecc----
Q 047548           32 NSFSDKVRQGGYGVVYRGKLH----EGRVAAVKVLSESM-----GNGEEFINEVACISGTSH-VNIVTPLGICCEG----   97 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~----~~~~~a~k~~~~~~-----~~~~~~~~e~~~l~~l~~-~~i~~l~~~~~~~----   97 (156)
                      ..+.+.||+|+||.||++...    .+..||+|++....     ...+.+.+|+.++..++| +||+++.+.+...    
T Consensus        26 y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~  105 (322)
T d1vzoa_          26 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH  105 (322)
T ss_dssp             EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEE
T ss_pred             eEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCcee
Confidence            556789999999999999852    27899999986432     223567899999999966 8999999998876    


Q ss_pred             eeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           98 LVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        98 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++||+.+|+|.+++...       ..+++..+..++.|++.||.|+|+++++|+||.
T Consensus       106 ~v~e~~~~~~L~~~i~~~-------~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiK  156 (322)
T d1vzoa_         106 LILDYINGGELFTHLSQR-------ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIK  156 (322)
T ss_dssp             EEECCCCSCBHHHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             eeeecccccHHHHHHHhc-------ccccHHHHHHHHHHHHHHHHHhhcCCEEeccCC
Confidence            899999999999999764       336788889999999999999999999999985

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.78  E-value=5.8e-19  Score=122.76  Aligned_cols=116  Identities=14%  Similarity=0.166  Sum_probs=92.6

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCCCCccccceeeecc-----eeeecCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSHVNIVTPLGICCEG-----LVYEFMSN  105 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~l~~~~~~~-----lv~e~~~~  105 (156)
                      +.+.+.||+|+||.||+|.... +..||+|++.... ....+..|+.++..+.|++++.....+...     +++||+ +
T Consensus         9 Y~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~-~   86 (299)
T d1ckia_           9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-G   86 (299)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT-TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred             EEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc-cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc-C
Confidence            4566899999999999999755 8899999876532 234578899999999887766655544333     789988 5


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      +++.+.+...      ...++...+..++.|++.||.|||+++++|+||-
T Consensus        87 ~~l~~~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiK  130 (299)
T d1ckia_          87 PSLEDLFNFC------SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVK  130 (299)
T ss_dssp             CBHHHHHHHT------TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             Cchhhhhhhc------cCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCC
Confidence            5777776554      4458899999999999999999999999999984

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.77  E-value=5.5e-19  Score=122.64  Aligned_cols=116  Identities=14%  Similarity=0.178  Sum_probs=95.6

Q ss_pred             hhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCCC-CCccccceeeecc----eeeecCCC
Q 047548           32 NSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTSH-VNIVTPLGICCEG----LVYEFMSN  105 (156)
Q Consensus        32 ~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~l~~~~~~~----lv~e~~~~  105 (156)
                      +.+.+.||+|+||.||+|.... +..||+|++.... +...+.+|...+..+.| ++++.+.+++...    ++|||+ +
T Consensus         7 Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-~   84 (293)
T d1csna_           7 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-G   84 (293)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc-CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-C
Confidence            4567889999999999999765 8899999876432 33456778888888855 7888888877766    899988 6


Q ss_pred             CChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548          106 GSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus       106 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ++|.+++...      ...++......++.|++.||.|||+++++|+||-
T Consensus        85 ~~l~~~~~~~------~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiK  128 (293)
T d1csna_          85 PSLEDLLDLC------GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIK  128 (293)
T ss_dssp             CBHHHHHHHT------TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCC
T ss_pred             CCHHHHHHhh------ccchhhHHHHHHHHHHHHHHHHHHHCCceeccCC
Confidence            7999998765      3458899999999999999999999999999984

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.63  E-value=2.5e-16  Score=111.77  Aligned_cols=121  Identities=15%  Similarity=0.125  Sum_probs=89.4

Q ss_pred             hhhhhhhccccccCceEEEEEeCC-CcEEEEEecccCCCChHHHHHHHHHHcCCC-----------CCCccccceeeecc
Q 047548           30 MTNSFSDKVRQGGYGVVYRGKLHE-GRVAAVKVLSESMGNGEEFINEVACISGTS-----------HVNIVTPLGICCEG   97 (156)
Q Consensus        30 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~-----------~~~i~~l~~~~~~~   97 (156)
                      .++.+.++||+|+||+||+|.... +..||+|+++......+.+.+|+.++..+.           |+|++++.+.+...
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            346778899999999999999764 899999998754333356777888777654           57788888777543


Q ss_pred             ------eeeecCCCCCh-HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcccc
Q 047548           98 ------LVYEFMSNGSL-HKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIA-VATLGLCIS  155 (156)
Q Consensus        98 ------lv~e~~~~g~L-~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~-~~~~h~~i~  155 (156)
                            +++.+...+.. ........     ...++...+..++.|++.||.|||+ .+++|+||-
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlK  153 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKKYE-----HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIK  153 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTT-----TSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCS
T ss_pred             cccceeeeeeeccccccccccccccc-----ccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCC
Confidence                  45555544433 33232221     4557889999999999999999998 789999984

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.59  E-value=1.5e-15  Score=98.94  Aligned_cols=109  Identities=9%  Similarity=0.036  Sum_probs=80.6

Q ss_pred             hhhhccccccCceEEEEEeCCCcEEEEEecccCCCC--------------h-----HHHHHHHHHHcCCCCCCcccccee
Q 047548           33 SFSDKVRQGGYGVVYRGKLHEGRVAAVKVLSESMGN--------------G-----EEFINEVACISGTSHVNIVTPLGI   93 (156)
Q Consensus        33 ~~~~~lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~--------------~-----~~~~~e~~~l~~l~~~~i~~l~~~   93 (156)
                      .+++.||+|+||.||+|...++..||+|+++.....              .     .....|...+..+.+.+++...+.
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~   82 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred             hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence            356789999999999999877899999987642110              0     123457778888888888877654


Q ss_pred             eecceeeecCCCCChHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 047548           94 CCEGLVYEFMSNGSLHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLGLCIS  155 (156)
Q Consensus        94 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h~~i~  155 (156)
                      ....++|||+++..+.+              ++......++.|++.++.|||+.+++|+||-
T Consensus        83 ~~~~lvme~~~~~~~~~--------------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiK  130 (191)
T d1zara2          83 EGNAVLMELIDAKELYR--------------VRVENPDEVLDMILEEVAKFYHRGIVHGDLS  130 (191)
T ss_dssp             ETTEEEEECCCCEEGGG--------------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             cCCEEEEEeeccccccc--------------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCC
Confidence            32229999998765432              2233446788999999999999999999984

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.01  E-value=0.072  Score=34.30  Aligned_cols=96  Identities=10%  Similarity=-0.021  Sum_probs=57.8

Q ss_pred             CceEEEEEeCCCcEEEEEecccCC-CChHHHHHHHHHHcCCC-CCCccccceeeecc----eeeecCCCCChHHHhhhcC
Q 047548           43 YGVVYRGKLHEGRVAAVKVLSESM-GNGEEFINEVACISGTS-HVNIVTPLGICCEG----LVYEFMSNGSLHKFIYDKG  116 (156)
Q Consensus        43 ~g~v~~~~~~~~~~~a~k~~~~~~-~~~~~~~~e~~~l~~l~-~~~i~~l~~~~~~~----lv~e~~~~g~L~~~l~~~~  116 (156)
                      -+.||+.... +..+.+|...... .....+.+|...+..+. +-.+++++......    ++++++++.++.+....  
T Consensus        27 ~~~v~rv~~~-~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~~--  103 (263)
T d1j7la_          27 PAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYED--  103 (263)
T ss_dssp             SSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHTTT--
T ss_pred             CCcEEEEEeC-CCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecccccccccccc--
Confidence            3578887643 5556667665422 22234666777665442 33455555554433    89999999887654321  


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 047548          117 SMSTKNNRLEWTTLSEIVVGVARGLECLIAVATLG  151 (156)
Q Consensus       117 ~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~h  151 (156)
                                ......++.+++..+..||+....+
T Consensus       104 ----------~~~~~~~~~~l~~~l~~lH~~~~~~  128 (263)
T d1j7la_         104 ----------EQSPEKIIELYAECIRLFHSIDISD  128 (263)
T ss_dssp             ----------CSCHHHHHHHHHHHHHHHHTSCCTT
T ss_pred             ----------cccHHHHHHHHHHHHHHHhccCccc
Confidence                      1122345777888899999876543

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=88.64  E-value=0.59  Score=29.55  Aligned_cols=93  Identities=22%  Similarity=0.143  Sum_probs=54.9

Q ss_pred             cccc-CceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCC--CCCCccccceeeecc----eeeecCCCCChHHH
Q 047548           39 RQGG-YGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGT--SHVNIVTPLGICCEG----LVYEFMSNGSLHKF  111 (156)
Q Consensus        39 g~g~-~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l--~~~~i~~l~~~~~~~----lv~e~~~~g~L~~~  111 (156)
                      ..|. -+.||+....++..+.+|......  ...+..|...+..+  ....+++++......    ++++++++.++.+ 
T Consensus        19 ~~G~s~~~v~r~~~~~~~~~vlK~~~~~~--~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~-   95 (255)
T d1nd4a_          19 TIGCSDAAVFRLSAQGRPVLFVKTDLSGA--LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS-   95 (255)
T ss_dssp             SCTTSSCEEEEEECTTSCCEEEEEECSCT--TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETTT-
T ss_pred             CCcccCCeEEEEEeCCCCEEEEEeCCccC--HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccccc-
Confidence            3443 357898877667677888765432  23455666666544  223355555554443    8999998865432 


Q ss_pred             hhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 047548          112 IYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVA  148 (156)
Q Consensus       112 l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~  148 (156)
                                 .....   ...+.++...|.-||+..
T Consensus        96 -----------~~~~~---~~~~~~l~~~la~LH~~~  118 (255)
T d1nd4a_          96 -----------SHLAP---AEKVSIMADAMRRLHTLD  118 (255)
T ss_dssp             -----------SCCCH---HHHHHHHHHHHHHHTTSC
T ss_pred             -----------ccccH---HHHHHHHHHHHHHHccCC
Confidence                       11222   234567778888888754

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=84.40  E-value=4.4  Score=27.48  Aligned_cols=72  Identities=14%  Similarity=-0.009  Sum_probs=43.6

Q ss_pred             ccccccCceEEEEEeCC-CcEEEEEecccC--------CCChHHHHHHHHHHcCC-C--CCCccccceeeecc--eeeec
Q 047548           37 KVRQGGYGVVYRGKLHE-GRVAAVKVLSES--------MGNGEEFINEVACISGT-S--HVNIVTPLGICCEG--LVYEF  102 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~-~~~~a~k~~~~~--------~~~~~~~~~e~~~l~~l-~--~~~i~~l~~~~~~~--lv~e~  102 (156)
                      .+|.|....||+..... +..+++|.-.+.        .........|...+..+ .  ...+++++......  ++||+
T Consensus        33 eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d~~~~~lvmE~  112 (392)
T d2pula1          33 EIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVMED  112 (392)
T ss_dssp             ECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEETTTTEEEECC
T ss_pred             EeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEcCCCCEEEEec
Confidence            57999999999987654 667888865431        11123455677777654 2  23455555544333  89999


Q ss_pred             CCCCCh
Q 047548          103 MSNGSL  108 (156)
Q Consensus       103 ~~~g~L  108 (156)
                      +.+..+
T Consensus       113 L~~~~~  118 (392)
T d2pula1         113 LSHLKI  118 (392)
T ss_dssp             CTTSEE
T ss_pred             cCCccc
Confidence            977554

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=83.73  E-value=1.7  Score=29.56  Aligned_cols=98  Identities=13%  Similarity=0.181  Sum_probs=59.8

Q ss_pred             ccccccCceEEEEEeCC--------CcEEEEEecccCCCChHHHHHHHHHHcCCCCCC-ccccceeeecceeeecCCCCC
Q 047548           37 KVRQGGYGVVYRGKLHE--------GRVAAVKVLSESMGNGEEFINEVACISGTSHVN-IVTPLGICCEGLVYEFMSNGS  107 (156)
Q Consensus        37 ~lg~g~~g~v~~~~~~~--------~~~~a~k~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~l~~~~~~~lv~e~~~~g~  107 (156)
                      .++.|-...+|+.....        ...+.+++... ....-...+|..+++.+.-.+ .+++++.+....+++|+++.+
T Consensus        49 ~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~-~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~g~I~efi~g~~  127 (395)
T d1nw1a_          49 RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN-PETESHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIPSRP  127 (395)
T ss_dssp             EECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS-CCCHHHHHHHHHHHHHHHHTTSSSCEEEEETTEEEECCCCEEE
T ss_pred             EcCCccccceEEEEeCCCCccccCCCCcEEEEecCC-cchhhHHHHHHHHHHHHHhCCCCCeEEEEcCCceEEEEecccc
Confidence            56777778899887643        24566666542 222234557777777663223 346677665558999998744


Q ss_pred             hHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 047548          108 LHKFIYDKGSMSTKNNRLEWTTLSEIVVGVARGLECLIAVATL  150 (156)
Q Consensus       108 L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~gl~yLH~~~~~  150 (156)
                      +..               .......+..+++..|+-+|+....
T Consensus       128 l~~---------------~d~~~~~~~~~iA~~La~lH~~~~~  155 (395)
T d1nw1a_         128 LSC---------------HEISLAHMSTKIAKRVAKVHQLEVP  155 (395)
T ss_dssp             CCT---------------TGGGSHHHHHHHHHHHHHHTTCCCS
T ss_pred             CCh---------------hhccchhhhHHHHHHHHHHhhcccc
Confidence            321               1112234677788889999986543

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=82.86  E-value=2.7  Score=27.74  Aligned_cols=65  Identities=9%  Similarity=0.009  Sum_probs=40.0

Q ss_pred             CCCCCCChHHHHhhhhhhh-----hc--cccccCceEEEEEeCCCcEEEEEecccCCCChHHHHHHHHHHcCC
Q 047548           17 LAPKGYNYSDVKKMTNSFS-----DK--VRQGGYGVVYRGKLHEGRVAAVKVLSESMGNGEEFINEVACISGT   82 (156)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~-----~~--lg~g~~g~v~~~~~~~~~~~a~k~~~~~~~~~~~~~~e~~~l~~l   82 (156)
                      ..+..+++..+......++     ..  |+ +--..||.....+|..+++|+..+.......+..|...+..+
T Consensus         3 ~~f~~L~pd~i~~al~~~g~~~~~~~~~L~-s~EN~vy~v~~~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L   74 (325)
T d1zyla1           3 FTFQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQL   74 (325)
T ss_dssp             CCCCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHH
T ss_pred             CCccccCHHHHHHHHHHcCCCCCcCccccc-cccceeEEEEcCCCCEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence            3455566666644443332     11  11 112569998887788899999876655556677777776654