Query 047551
Match_columns 352
No_of_seqs 329 out of 2637
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 21:28:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047551.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047551hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1bq0_A DNAJ, HSP40; chaperone, 99.9 1.9E-22 6.6E-27 164.7 5.6 98 106-214 2-100 (103)
2 2ys8_A RAB-related GTP-binding 99.8 8.7E-21 3E-25 151.4 8.5 80 88-167 8-87 (90)
3 1hdj_A Human HSP40, HDJ-1; mol 99.8 7.1E-21 2.4E-25 147.2 7.1 70 106-176 2-71 (77)
4 2ctp_A DNAJ homolog subfamily 99.8 1.6E-20 5.5E-25 145.5 5.3 69 105-173 5-73 (78)
5 2ctr_A DNAJ homolog subfamily 99.8 1.9E-20 6.7E-25 148.5 5.3 72 106-178 6-77 (88)
6 2cug_A Mkiaa0962 protein; DNAJ 99.8 2.9E-20 1E-24 147.5 5.9 69 105-173 15-83 (88)
7 2och_A Hypothetical protein DN 99.8 5.3E-20 1.8E-24 140.9 6.8 68 104-173 5-72 (73)
8 2dn9_A DNAJ homolog subfamily 99.8 4.3E-20 1.5E-24 143.4 6.3 69 105-173 5-74 (79)
9 2o37_A Protein SIS1; HSP40, J- 99.8 3.9E-20 1.3E-24 148.0 5.7 72 104-178 5-76 (92)
10 2ej7_A HCG3 gene; HCG3 protein 99.8 8.5E-20 2.9E-24 142.6 5.9 68 106-173 8-77 (82)
11 2dmx_A DNAJ homolog subfamily 99.8 1.7E-19 5.9E-24 144.1 5.1 68 106-173 8-77 (92)
12 2ctq_A DNAJ homolog subfamily 99.8 1.9E-19 6.3E-24 149.2 5.1 68 106-173 19-87 (112)
13 2lgw_A DNAJ homolog subfamily 99.8 1.5E-19 5.1E-24 146.8 4.4 67 107-173 2-70 (99)
14 2yua_A Williams-beuren syndrom 99.8 3.9E-19 1.3E-23 144.1 6.7 69 105-173 15-84 (99)
15 1wjz_A 1700030A21RIK protein; 99.8 1.8E-19 6.2E-24 144.2 4.5 69 105-173 14-89 (94)
16 3lz8_A Putative chaperone DNAJ 99.8 3.7E-20 1.3E-24 180.0 0.0 68 106-173 27-94 (329)
17 2ctw_A DNAJ homolog subfamily 99.8 5E-19 1.7E-23 145.9 5.4 69 105-173 15-84 (109)
18 2qsa_A DNAJ homolog DNJ-2; J-d 99.7 1E-18 3.5E-23 143.8 2.4 69 105-173 13-86 (109)
19 3apq_A DNAJ homolog subfamily 99.7 6.5E-18 2.2E-22 152.1 7.9 67 107-173 2-69 (210)
20 2l6l_A DNAJ homolog subfamily 99.7 1.3E-17 4.4E-22 145.3 5.1 68 106-173 9-83 (155)
21 1gh6_A Large T antigen; tumor 99.7 6E-18 2E-22 140.8 2.0 65 106-173 7-73 (114)
22 1faf_A Large T antigen; J doma 99.6 5.2E-17 1.8E-21 126.5 4.1 63 107-173 11-75 (79)
23 2pf4_E Small T antigen; PP2A, 99.6 2.7E-17 9.1E-22 146.1 1.5 65 106-173 10-76 (174)
24 3hho_A CO-chaperone protein HS 99.6 1.4E-16 4.9E-21 141.6 5.1 67 106-172 3-77 (174)
25 1iur_A KIAA0730 protein; DNAJ 99.6 1E-16 3.5E-21 127.4 1.4 60 106-165 15-76 (88)
26 1fpo_A HSC20, chaperone protei 99.6 2.9E-16 9.9E-21 139.3 4.3 67 107-173 1-75 (171)
27 1n4c_A Auxilin; four helix bun 99.6 2.1E-16 7E-21 141.3 3.2 62 107-168 117-182 (182)
28 3ag7_A Putative uncharacterize 99.6 2.2E-16 7.6E-21 129.7 1.5 58 105-163 39-104 (106)
29 3bvo_A CO-chaperone protein HS 99.6 7.7E-16 2.6E-20 140.5 5.0 66 106-171 42-115 (207)
30 2qwo_B Putative tyrosine-prote 99.6 3.7E-16 1.3E-20 125.1 2.2 55 107-161 33-91 (92)
31 2guz_A Mitochondrial import in 99.6 1.3E-15 4.4E-20 116.2 3.4 56 107-165 14-70 (71)
32 3uo3_A J-type CO-chaperone JAC 99.5 2E-15 6.7E-20 135.1 3.4 66 105-172 9-81 (181)
33 2y4t_A DNAJ homolog subfamily 99.5 2E-14 6.7E-19 138.4 9.7 145 10-171 297-450 (450)
34 3apo_A DNAJ homolog subfamily 99.5 3.6E-15 1.2E-19 158.3 0.8 73 105-178 19-92 (780)
35 2guz_B Mitochondrial import in 98.7 1.3E-08 4.5E-13 76.1 4.7 49 110-161 7-58 (65)
36 2pzi_A Probable serine/threoni 97.1 0.00028 9.6E-09 73.6 4.8 133 9-158 535-675 (681)
37 4gco_A Protein STI-1; structur 93.9 0.14 4.8E-06 40.9 6.9 40 3-42 8-47 (126)
38 4ga2_A E3 SUMO-protein ligase 93.7 0.091 3.1E-06 43.1 5.5 48 3-50 26-74 (150)
39 4gcn_A Protein STI-1; structur 93.5 0.16 5.6E-06 40.4 6.6 38 5-42 5-42 (127)
40 3upv_A Heat shock protein STI1 92.8 0.25 8.7E-06 38.2 6.6 37 6-42 2-38 (126)
41 3ma5_A Tetratricopeptide repea 91.8 0.27 9.4E-06 37.2 5.5 45 6-50 5-50 (100)
42 2l6j_A TPR repeat-containing p 91.6 0.33 1.1E-05 36.0 5.7 36 7-42 3-38 (111)
43 3sz7_A HSC70 cochaperone (SGT) 91.4 0.43 1.5E-05 38.9 6.7 40 3-42 6-45 (164)
44 4gco_A Protein STI-1; structur 90.7 0.34 1.2E-05 38.5 5.3 31 11-41 50-80 (126)
45 2xcb_A PCRH, regulatory protei 90.6 0.73 2.5E-05 36.7 7.2 40 3-42 13-52 (142)
46 3vtx_A MAMA; tetratricopeptide 90.5 0.36 1.2E-05 39.7 5.4 36 7-42 4-39 (184)
47 1na3_A Designed protein CTPR2; 90.3 0.8 2.7E-05 32.6 6.6 37 6-42 7-43 (91)
48 4gcn_A Protein STI-1; structur 90.1 0.49 1.7E-05 37.5 5.7 38 13-50 88-125 (127)
49 2v5f_A Prolyl 4-hydroxylase su 90.0 0.63 2.2E-05 35.9 6.1 31 8-38 5-35 (104)
50 1pc2_A Mitochondria fission pr 90.0 0.71 2.4E-05 39.5 6.9 44 9-52 72-116 (152)
51 3gyz_A Chaperone protein IPGC; 89.9 0.87 3E-05 37.9 7.3 41 2-42 30-70 (151)
52 1elw_A TPR1-domain of HOP; HOP 89.8 0.63 2.2E-05 34.2 5.8 37 6-42 2-38 (118)
53 1na3_A Designed protein CTPR2; 89.0 0.67 2.3E-05 33.0 5.3 32 11-42 46-77 (91)
54 2hr2_A Hypothetical protein; a 89.0 0.35 1.2E-05 41.7 4.2 37 5-41 8-44 (159)
55 1elr_A TPR2A-domain of HOP; HO 88.0 1.3 4.4E-05 33.1 6.6 37 6-42 2-38 (131)
56 3k9i_A BH0479 protein; putativ 87.7 1.2 4E-05 34.2 6.3 38 5-42 24-61 (117)
57 2vgx_A Chaperone SYCD; alterna 87.7 1.5 5.2E-05 35.6 7.2 40 3-42 16-55 (148)
58 3q49_B STIP1 homology and U bo 87.4 0.68 2.3E-05 35.8 4.7 38 5-42 6-43 (137)
59 2kat_A Uncharacterized protein 87.1 0.84 2.9E-05 34.7 5.0 36 7-42 18-53 (115)
60 1elr_A TPR2A-domain of HOP; HO 86.9 1 3.6E-05 33.7 5.4 43 8-50 79-121 (131)
61 1nzn_A CGI-135 protein, fissio 86.8 1.3 4.6E-05 36.6 6.3 42 11-52 77-119 (126)
62 1hxi_A PEX5, peroxisome target 86.7 1.1 3.9E-05 35.0 5.7 41 10-50 19-60 (121)
63 2xev_A YBGF; tetratricopeptide 86.5 1.6 5.4E-05 33.2 6.4 31 11-41 42-72 (129)
64 2vyi_A SGTA protein; chaperone 86.4 1.6 5.5E-05 32.5 6.3 39 4-42 8-46 (131)
65 2dba_A Smooth muscle cell asso 85.8 0.76 2.6E-05 35.6 4.2 37 5-41 25-61 (148)
66 2kc7_A BFR218_protein; tetratr 85.6 1.4 4.8E-05 32.2 5.5 33 10-42 37-69 (99)
67 2l6j_A TPR repeat-containing p 85.4 0.78 2.7E-05 33.9 3.9 32 10-41 40-71 (111)
68 2r5s_A Uncharacterized protein 85.3 0.28 9.5E-06 40.8 1.4 47 3-49 1-48 (176)
69 1hxi_A PEX5, peroxisome target 85.1 1.3 4.3E-05 34.8 5.2 32 11-42 54-85 (121)
70 1elw_A TPR1-domain of HOP; HOP 85.1 1.5 5.2E-05 32.0 5.5 33 9-41 39-71 (118)
71 2dba_A Smooth muscle cell asso 84.9 2.1 7.1E-05 33.0 6.4 34 8-41 65-98 (148)
72 3ax2_A Mitochondrial import re 84.9 2 6.7E-05 32.3 5.8 41 10-52 19-59 (73)
73 1a17_A Serine/threonine protei 84.5 2.3 7.8E-05 33.5 6.6 38 5-42 10-47 (166)
74 3o48_A Mitochondria fission 1 84.4 1.9 6.3E-05 36.2 6.0 42 11-52 81-123 (134)
75 2kc7_A BFR218_protein; tetratr 84.3 1 3.5E-05 33.0 4.1 32 11-42 3-34 (99)
76 3upv_A Heat shock protein STI1 84.1 1.6 5.3E-05 33.5 5.3 33 10-42 40-72 (126)
77 2e2e_A Formate-dependent nitri 83.9 2 6.7E-05 35.0 6.1 41 11-51 118-159 (177)
78 3rkv_A Putative peptidylprolyl 83.8 1.7 5.9E-05 35.0 5.7 30 11-40 66-95 (162)
79 2fbn_A 70 kDa peptidylprolyl i 83.7 2.9 9.8E-05 34.9 7.2 37 6-42 36-72 (198)
80 2xcb_A PCRH, regulatory protei 83.6 1.9 6.4E-05 34.2 5.7 32 11-42 55-86 (142)
81 2xev_A YBGF; tetratricopeptide 83.4 2.4 8.3E-05 32.1 6.1 32 11-42 5-36 (129)
82 1om2_A Protein (mitochondrial 83.4 2.2 7.5E-05 33.7 5.7 41 10-52 22-62 (95)
83 2lni_A Stress-induced-phosphop 83.1 1.6 5.5E-05 32.9 4.9 32 10-41 52-83 (133)
84 3gyz_A Chaperone protein IPGC; 83.0 1.9 6.5E-05 35.7 5.7 32 11-42 73-104 (151)
85 1y8m_A FIS1; mitochondria, unk 83.0 2.3 7.8E-05 36.1 6.1 42 11-52 80-122 (144)
86 2lni_A Stress-induced-phosphop 82.9 2.2 7.7E-05 32.0 5.7 35 7-41 15-49 (133)
87 2v5f_A Prolyl 4-hydroxylase su 82.7 3 0.0001 31.9 6.3 32 11-42 49-80 (104)
88 2kck_A TPR repeat; tetratricop 82.7 3.2 0.00011 29.9 6.4 30 11-40 43-72 (112)
89 3bee_A Putative YFRE protein; 82.6 2.6 8.8E-05 32.2 5.9 34 8-41 6-42 (93)
90 2gw1_A Mitochondrial precursor 82.3 2 6.7E-05 40.7 6.2 37 5-41 3-39 (514)
91 3sz7_A HSC70 cochaperone (SGT) 82.2 1.8 6.3E-05 35.0 5.2 33 10-42 47-79 (164)
92 3uq3_A Heat shock protein STI1 82.1 3.2 0.00011 35.0 7.0 35 4-38 1-35 (258)
93 2vyi_A SGTA protein; chaperone 81.2 2.5 8.4E-05 31.4 5.3 31 11-41 49-79 (131)
94 4ga2_A E3 SUMO-protein ligase 80.8 2.2 7.7E-05 34.5 5.3 33 10-42 67-99 (150)
95 2vgx_A Chaperone SYCD; alterna 80.7 2.7 9.3E-05 34.0 5.7 32 11-42 58-89 (148)
96 1na0_A Designed protein CTPR3; 80.7 2.7 9.1E-05 30.9 5.3 33 9-41 44-76 (125)
97 2fbn_A 70 kDa peptidylprolyl i 80.5 2.2 7.6E-05 35.7 5.3 29 13-41 127-155 (198)
98 3rkv_A Putative peptidylprolyl 80.3 2 6.7E-05 34.7 4.7 32 6-37 9-40 (162)
99 1zu2_A Mitochondrial import re 80.0 2.3 7.8E-05 36.4 5.2 30 22-51 105-135 (158)
100 1na0_A Designed protein CTPR3; 79.4 4.8 0.00017 29.4 6.4 35 8-42 9-43 (125)
101 3q49_B STIP1 homology and U bo 79.4 2.9 9.9E-05 32.0 5.3 33 10-42 45-77 (137)
102 3urz_A Uncharacterized protein 79.0 4.5 0.00016 34.3 6.9 29 14-42 60-88 (208)
103 3vtx_A MAMA; tetratricopeptide 77.7 3.2 0.00011 33.8 5.3 32 11-42 110-141 (184)
104 3bee_A Putative YFRE protein; 77.4 2.5 8.6E-05 32.2 4.3 41 11-51 46-87 (93)
105 3k9i_A BH0479 protein; putativ 77.3 2.4 8.2E-05 32.4 4.2 42 12-53 65-107 (117)
106 3qou_A Protein YBBN; thioredox 76.3 3.7 0.00013 37.0 5.8 42 8-49 117-159 (287)
107 2vq2_A PILW, putative fimbrial 76.0 5.5 0.00019 32.7 6.4 40 3-42 3-42 (225)
108 3ieg_A DNAJ homolog subfamily 75.8 5 0.00017 35.5 6.4 36 7-42 2-37 (359)
109 1a17_A Serine/threonine protei 75.7 4.3 0.00015 31.8 5.4 30 11-40 50-79 (166)
110 2kck_A TPR repeat; tetratricop 75.3 3 0.0001 30.1 4.1 33 10-42 8-40 (112)
111 3ma5_A Tetratricopeptide repea 75.0 1.9 6.6E-05 32.3 3.0 32 11-42 44-75 (100)
112 3qky_A Outer membrane assembly 74.5 3.5 0.00012 35.9 4.9 37 6-42 13-49 (261)
113 3urz_A Uncharacterized protein 74.4 3.8 0.00013 34.8 5.0 32 11-42 91-122 (208)
114 3ieg_A DNAJ homolog subfamily 73.9 4.1 0.00014 36.1 5.3 28 13-40 277-304 (359)
115 1ihg_A Cyclophilin 40; ppiase 73.7 4.4 0.00015 38.5 5.8 31 10-40 275-305 (370)
116 2e2e_A Formate-dependent nitri 71.7 3.9 0.00013 33.2 4.3 35 8-42 44-78 (177)
117 2c2l_A CHIP, carboxy terminus 71.1 6.9 0.00024 35.1 6.2 35 8-42 4-38 (281)
118 2kat_A Uncharacterized protein 71.0 2.1 7E-05 32.4 2.3 32 10-41 55-86 (115)
119 2yhc_A BAMD, UPF0169 lipoprote 70.9 5.1 0.00018 34.3 5.1 35 8-42 4-38 (225)
120 2cpt_A SKD1 protein, vacuolar 70.9 5.7 0.0002 32.2 5.0 37 1-37 8-47 (117)
121 3iqc_A FLIS, flagellar protein 70.9 5.6 0.00019 32.9 5.1 33 6-38 34-66 (131)
122 1p5q_A FKBP52, FK506-binding p 70.8 7.3 0.00025 36.1 6.5 38 5-42 144-181 (336)
123 1p5q_A FKBP52, FK506-binding p 70.8 4.8 0.00017 37.3 5.2 31 10-40 198-228 (336)
124 3qky_A Outer membrane assembly 70.0 9.8 0.00034 32.9 6.8 33 10-42 150-182 (261)
125 2r5s_A Uncharacterized protein 69.9 6.1 0.00021 32.3 5.2 33 9-41 109-141 (176)
126 2fo7_A Synthetic consensus TPR 69.5 7.6 0.00026 28.5 5.2 32 11-42 4-35 (136)
127 2pl2_A Hypothetical conserved 69.5 5.6 0.00019 34.0 5.0 31 12-42 155-185 (217)
128 1hh8_A P67PHOX, NCF-2, neutrop 69.1 7.4 0.00025 32.1 5.6 34 10-43 123-156 (213)
129 3uq3_A Heat shock protein STI1 68.8 12 0.0004 31.3 6.9 39 4-42 135-173 (258)
130 2pl2_A Hypothetical conserved 68.5 9.3 0.00032 32.5 6.2 26 15-40 46-71 (217)
131 3fp2_A TPR repeat-containing p 68.4 4.4 0.00015 38.6 4.5 37 6-42 23-59 (537)
132 1hh8_A P67PHOX, NCF-2, neutrop 68.4 9.9 0.00034 31.4 6.2 32 11-42 40-71 (213)
133 3mkr_A Coatomer subunit epsilo 68.3 25 0.00087 31.6 9.5 22 20-41 178-199 (291)
134 4i17_A Hypothetical protein; T 68.3 9.5 0.00033 32.1 6.2 33 8-40 7-39 (228)
135 1vh6_A Flagellar protein FLIS; 68.2 6.8 0.00023 33.0 5.1 33 6-38 31-63 (145)
136 3as5_A MAMA; tetratricopeptide 67.9 4.5 0.00015 31.9 3.8 42 1-42 1-42 (186)
137 4a1s_A PINS, partner of inscut 67.9 7.2 0.00025 35.8 5.7 39 4-42 44-82 (411)
138 1xnf_A Lipoprotein NLPI; TPR, 67.1 11 0.00036 32.2 6.3 37 6-42 41-77 (275)
139 2fo7_A Synthetic consensus TPR 66.2 9 0.00031 28.1 5.0 32 11-42 38-69 (136)
140 1kt0_A FKBP51, 51 kDa FK506-bi 66.1 8.7 0.0003 37.3 6.2 34 8-41 317-350 (457)
141 2y4t_A DNAJ homolog subfamily 65.8 9.6 0.00033 35.3 6.2 38 4-41 22-59 (450)
142 1kt0_A FKBP51, 51 kDa FK506-bi 65.5 9.1 0.00031 37.2 6.1 37 6-42 266-302 (457)
143 3u4t_A TPR repeat-containing p 65.0 9.1 0.00031 32.7 5.5 41 10-50 5-46 (272)
144 1ihg_A Cyclophilin 40; ppiase 64.6 9.8 0.00034 36.0 6.1 43 8-50 307-350 (370)
145 2ho1_A Type 4 fimbrial biogene 64.6 9.4 0.00032 32.3 5.4 39 4-42 32-71 (252)
146 4i17_A Hypothetical protein; T 64.1 7 0.00024 32.9 4.5 27 14-40 48-74 (228)
147 1xnf_A Lipoprotein NLPI; TPR, 63.3 18 0.00063 30.6 7.2 35 8-42 215-249 (275)
148 4a5x_A MITD1, MIT domain-conta 62.7 8.7 0.0003 29.4 4.3 37 1-37 9-45 (86)
149 3as5_A MAMA; tetratricopeptide 62.0 12 0.0004 29.3 5.2 35 8-42 42-76 (186)
150 2v6y_A AAA family ATPase, P60 61.8 13 0.00043 28.2 5.1 33 5-37 8-40 (83)
151 2yhc_A BAMD, UPF0169 lipoprote 61.7 11 0.00037 32.2 5.3 32 11-42 44-75 (225)
152 2if4_A ATFKBP42; FKBP-like, al 61.5 3.6 0.00012 38.3 2.3 32 11-42 233-264 (338)
153 2w2u_A Hypothetical P60 katani 61.5 13 0.00044 28.2 5.1 33 5-37 16-48 (83)
154 3u4t_A TPR repeat-containing p 60.9 18 0.00063 30.7 6.7 32 11-42 77-108 (272)
155 2hr2_A Hypothetical protein; a 60.2 6.6 0.00023 33.5 3.6 31 12-42 106-136 (159)
156 3hym_B Cell division cycle pro 59.0 8 0.00027 33.8 4.1 33 10-42 238-270 (330)
157 1wfd_A Hypothetical protein 15 58.2 13 0.00044 28.8 4.6 33 5-37 12-44 (93)
158 4eqf_A PEX5-related protein; a 57.5 14 0.00047 33.4 5.5 33 10-42 67-99 (365)
159 4gyw_A UDP-N-acetylglucosamine 57.0 14 0.0005 38.6 6.2 37 6-42 7-43 (723)
160 4abn_A Tetratricopeptide repea 56.9 9.2 0.00031 37.2 4.4 30 11-40 140-169 (474)
161 2if4_A ATFKBP42; FKBP-like, al 56.8 13 0.00045 34.4 5.3 41 10-50 266-307 (338)
162 1wao_1 Serine/threonine protei 56.8 13 0.00046 36.3 5.6 40 11-50 77-117 (477)
163 2rkl_A Vacuolar protein sortin 56.7 19 0.00065 25.3 4.7 32 6-37 18-49 (53)
164 2q7f_A YRRB protein; TPR, prot 56.5 16 0.00054 30.4 5.3 30 11-40 60-89 (243)
165 2ho1_A Type 4 fimbrial biogene 56.3 20 0.00068 30.2 6.0 34 8-41 141-174 (252)
166 3cv0_A Peroxisome targeting si 56.3 17 0.00058 31.6 5.7 35 8-42 21-55 (327)
167 1fch_A Peroxisomal targeting s 56.0 16 0.00055 32.6 5.7 32 11-42 67-98 (368)
168 2vq2_A PILW, putative fimbrial 55.8 19 0.00065 29.3 5.7 32 10-41 115-146 (225)
169 1orj_A Flagellar protein FLIS; 55.4 9.2 0.00031 31.6 3.5 32 6-37 27-62 (130)
170 2v6x_A Vacuolar protein sortin 54.9 16 0.00054 27.5 4.6 33 5-37 10-42 (85)
171 2q7f_A YRRB protein; TPR, prot 54.8 18 0.00063 29.9 5.5 34 8-41 23-56 (243)
172 1w3b_A UDP-N-acetylglucosamine 54.8 9.8 0.00033 34.8 4.0 30 13-42 4-33 (388)
173 3qou_A Protein YBBN; thioredox 54.7 16 0.00055 32.7 5.4 34 8-41 219-252 (287)
174 3ro2_A PINS homolog, G-protein 53.9 17 0.00057 31.4 5.3 35 8-42 5-39 (338)
175 3hym_B Cell division cycle pro 53.6 24 0.0008 30.7 6.2 40 11-50 273-313 (330)
176 4abn_A Tetratricopeptide repea 53.2 16 0.00056 35.4 5.5 36 7-42 257-292 (474)
177 3ro3_A PINS homolog, G-protein 53.1 14 0.00048 28.0 4.2 37 6-42 7-43 (164)
178 2c2l_A CHIP, carboxy terminus 52.8 20 0.0007 31.9 5.8 32 11-42 41-72 (281)
179 3ro3_A PINS homolog, G-protein 52.5 16 0.00055 27.6 4.4 34 9-42 50-83 (164)
180 2dl1_A Spartin; SPG20, MIT, st 51.2 20 0.0007 29.1 4.8 31 6-36 20-50 (116)
181 1wao_1 Serine/threonine protei 50.2 18 0.0006 35.5 5.2 32 11-42 43-74 (477)
182 1zu2_A Mitochondrial import re 49.4 7 0.00024 33.4 1.9 34 9-42 37-80 (158)
183 1x58_A Hypothetical protein 49 49.2 44 0.0015 24.1 5.8 47 87-133 6-57 (62)
184 2vsy_A XCC0866; transferase, g 49.0 16 0.00055 35.9 4.8 29 12-40 27-55 (568)
185 4eqf_A PEX5-related protein; a 48.7 22 0.00074 32.0 5.3 32 11-42 102-133 (365)
186 4fm3_A Uncharacterized hypothe 48.7 24 0.00083 27.8 4.8 29 7-35 33-61 (98)
187 3sf4_A G-protein-signaling mod 47.7 21 0.00073 32.1 5.1 35 8-42 9-43 (406)
188 1fch_A Peroxisomal targeting s 46.7 24 0.00084 31.4 5.3 32 10-41 219-250 (368)
189 3eab_A Spastin; spastin, MIT, 46.3 15 0.00051 28.6 3.1 39 6-52 14-55 (89)
190 4gyw_A UDP-N-acetylglucosamine 46.3 21 0.0007 37.4 5.3 32 11-42 114-145 (723)
191 3cv0_A Peroxisome targeting si 45.9 26 0.0009 30.3 5.3 30 11-40 175-204 (327)
192 2vsy_A XCC0866; transferase, g 45.4 24 0.00083 34.6 5.5 29 13-41 96-124 (568)
193 1w3b_A UDP-N-acetylglucosamine 44.9 17 0.00057 33.2 3.9 31 11-41 70-100 (388)
194 3fp2_A TPR repeat-containing p 44.5 24 0.00081 33.4 5.0 34 9-42 60-93 (537)
195 4h7y_A Dual specificity protei 44.2 51 0.0018 28.2 6.5 31 10-40 96-126 (161)
196 1qqe_A Vesicular transport pro 42.4 37 0.0013 30.1 5.8 32 11-42 161-192 (292)
197 1qqe_A Vesicular transport pro 42.2 22 0.00075 31.7 4.2 34 8-41 77-110 (292)
198 2pzi_A Probable serine/threoni 41.7 40 0.0014 34.5 6.5 32 10-41 435-466 (681)
199 4b4t_Q 26S proteasome regulato 41.5 24 0.00082 32.5 4.5 31 11-41 7-37 (434)
200 2vkj_A TM1634; membrane protei 39.9 66 0.0023 25.1 5.9 46 6-51 51-100 (106)
201 2gw1_A Mitochondrial precursor 39.3 53 0.0018 30.6 6.6 35 6-40 235-269 (514)
202 4a1s_A PINS, partner of inscut 39.1 40 0.0014 30.6 5.6 35 10-44 345-379 (411)
203 3ly7_A Transcriptional activat 38.8 36 0.0012 33.0 5.3 22 20-41 322-343 (372)
204 2h6f_A Protein farnesyltransfe 38.5 51 0.0017 31.3 6.4 38 5-42 94-131 (382)
205 1ouv_A Conserved hypothetical 37.5 47 0.0016 28.5 5.5 31 6-36 4-34 (273)
206 2cfu_A SDSA1; SDS-hydrolase, l 36.9 48 0.0016 34.3 6.2 46 8-53 449-496 (658)
207 3nf1_A KLC 1, kinesin light ch 36.0 49 0.0017 28.3 5.4 34 4-37 23-56 (311)
208 3edt_B KLC 2, kinesin light ch 35.8 36 0.0012 28.5 4.3 35 5-39 166-200 (283)
209 2ifu_A Gamma-SNAP; membrane fu 35.4 52 0.0018 29.4 5.6 34 7-40 154-187 (307)
210 3u64_A Protein TP_0956; tetrat 35.0 29 0.00099 32.8 3.8 23 21-43 217-239 (301)
211 4g1t_A Interferon-induced prot 34.9 37 0.0013 31.7 4.6 31 12-42 338-368 (472)
212 2h6f_A Protein farnesyltransfe 34.8 45 0.0015 31.7 5.3 32 11-42 134-166 (382)
213 3edt_B KLC 2, kinesin light ch 34.7 45 0.0015 27.9 4.8 33 5-37 124-156 (283)
214 3ly7_A Transcriptional activat 34.7 33 0.0011 33.2 4.3 40 14-53 283-322 (372)
215 2ifu_A Gamma-SNAP; membrane fu 34.6 34 0.0011 30.7 4.2 32 7-39 115-146 (307)
216 3gw4_A Uncharacterized protein 33.9 55 0.0019 26.1 5.1 32 11-42 150-181 (203)
217 3mkr_A Coatomer subunit epsilo 33.8 59 0.002 29.0 5.7 31 12-42 134-164 (291)
218 2rpa_A Katanin P60 ATPase-cont 33.6 56 0.0019 24.5 4.5 35 2-36 6-40 (78)
219 2ond_A Cleavage stimulation fa 33.3 29 0.00098 31.0 3.5 20 21-40 182-201 (308)
220 3rjv_A Putative SEL1 repeat pr 33.2 94 0.0032 26.0 6.7 42 8-49 125-170 (212)
221 4g1t_A Interferon-induced prot 33.1 46 0.0016 31.0 5.0 31 12-42 251-281 (472)
222 3dza_A Uncharacterized putativ 32.8 47 0.0016 29.3 4.6 36 7-42 34-69 (191)
223 3gw4_A Uncharacterized protein 32.8 62 0.0021 25.8 5.2 31 7-37 65-95 (203)
224 3u3w_A Transcriptional activat 32.6 38 0.0013 29.8 4.2 33 9-41 197-229 (293)
225 2qfc_A PLCR protein; TPR, HTH, 32.5 78 0.0027 27.7 6.2 37 6-42 73-109 (293)
226 3nf1_A KLC 1, kinesin light ch 32.3 43 0.0015 28.6 4.3 37 4-40 191-227 (311)
227 2xpi_A Anaphase-promoting comp 32.2 54 0.0019 31.5 5.5 37 6-42 198-234 (597)
228 3u64_A Protein TP_0956; tetrat 31.9 42 0.0014 31.6 4.4 40 2-41 217-273 (301)
229 3q15_A PSP28, response regulat 31.6 43 0.0015 30.6 4.5 29 11-39 264-292 (378)
230 2e2a_A Protein (enzyme IIA); h 31.4 71 0.0024 25.3 5.0 34 5-38 17-50 (105)
231 1wcr_A PTS system, N, N'-diace 31.1 73 0.0025 25.1 5.0 34 4-37 14-47 (103)
232 3k1s_A PTS system, cellobiose- 30.3 76 0.0026 25.3 5.0 35 4-38 18-52 (109)
233 3l8r_A PTCA, putative PTS syst 29.6 72 0.0025 25.9 4.9 33 6-38 35-67 (120)
234 2xpi_A Anaphase-promoting comp 29.1 84 0.0029 30.1 6.3 33 10-42 518-550 (597)
235 3ulq_A Response regulator aspa 29.0 50 0.0017 30.1 4.4 36 7-42 142-177 (383)
236 2qfc_A PLCR protein; TPR, HTH, 28.5 50 0.0017 29.0 4.2 31 10-40 198-228 (293)
237 1ouv_A Conserved hypothetical 28.5 84 0.0029 26.8 5.6 26 14-39 188-217 (273)
238 3ro2_A PINS homolog, G-protein 28.1 53 0.0018 28.1 4.2 34 8-41 263-296 (338)
239 3mv2_B Coatomer subunit epsilo 27.7 73 0.0025 29.8 5.3 25 15-39 143-167 (310)
240 3ulq_A Response regulator aspa 26.9 58 0.002 29.7 4.4 33 10-42 186-218 (383)
241 1klx_A Cysteine rich protein B 26.8 80 0.0027 24.7 4.8 18 21-38 110-127 (138)
242 2ond_A Cleavage stimulation fa 26.7 60 0.002 28.8 4.4 31 12-42 103-133 (308)
243 3o10_A Sacsin; all-helical dom 26.4 48 0.0016 27.2 3.4 33 3-35 4-43 (141)
244 1o3u_A Conserved hypothetical 25.9 93 0.0032 25.0 5.1 32 6-37 14-45 (135)
245 3n71_A Histone lysine methyltr 25.2 66 0.0023 31.9 4.7 33 7-39 308-340 (490)
246 4f3v_A ESX-1 secretion system 25.1 84 0.0029 29.0 5.2 26 15-40 215-240 (282)
247 4fx5_A VON willebrand factor t 25.0 65 0.0022 31.8 4.6 47 5-51 379-425 (464)
248 3u3w_A Transcriptional activat 24.5 1.8E+02 0.0061 25.3 7.2 38 6-43 73-110 (293)
249 3rjv_A Putative SEL1 repeat pr 24.2 80 0.0027 26.4 4.5 31 8-38 18-48 (212)
250 4a3n_A Transcription factor SO 24.2 88 0.003 21.8 4.1 42 125-170 14-55 (71)
251 1ug2_A 2610100B20RIK gene prod 23.5 2E+02 0.0069 22.3 6.1 55 86-140 30-89 (95)
252 3q15_A PSP28, response regulat 23.4 72 0.0025 29.1 4.4 36 7-42 140-175 (378)
253 3sf4_A G-protein-signaling mod 23.0 89 0.003 27.8 4.8 34 8-41 307-340 (406)
254 2juh_A Telomere binding protei 22.3 1.4E+02 0.0048 24.2 5.3 78 88-165 16-103 (121)
255 1klx_A Cysteine rich protein B 21.4 1.2E+02 0.004 23.7 4.8 28 10-37 59-90 (138)
256 2xze_A STAM-binding protein; h 20.8 1.1E+02 0.0037 25.5 4.5 32 7-38 39-70 (146)
257 2roh_A RTBP1, telomere binding 20.7 1.7E+02 0.006 23.7 5.6 76 88-163 30-115 (122)
258 2ooe_A Cleavage stimulation fa 20.3 74 0.0025 30.7 3.9 31 10-41 15-45 (530)
259 3qwp_A SET and MYND domain-con 20.1 1.3E+02 0.0045 29.0 5.7 33 6-38 369-401 (429)
No 1
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.86 E-value=1.9e-22 Score=164.67 Aligned_cols=98 Identities=38% Similarity=0.706 Sum_probs=66.9
Q ss_pred CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhccccCC
Q 047551 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHN 184 (352)
Q Consensus 106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~ 184 (352)
..|||+||||+++|+.++||+|||+|++++|||++. .+.+++.|+.|++||+||+||.+|+.||..|. .+...+
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~-~~~~~~---- 76 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGH-AAFEQG---- 76 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTT-TSSCSC----
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhh-hhhccc----
Confidence 468999999999999999999999999999999998 47889999999999999999999999999997 443311
Q ss_pred CCCCCcCCCCCCCCCCCChHHHHHhhhCCC
Q 047551 185 VRPRRRRAQHDFFDDELDPDEIFRSFFGQQ 214 (352)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~pediF~~fFGg~ 214 (352)
.. +.++ +...+++.++|..|||+.
T Consensus 77 --~~---~~~~-~~~~~~~~~~f~~~f~~~ 100 (103)
T 1bq0_A 77 --GM---GGGG-FGGGADFSDIFGDVFGDI 100 (103)
T ss_dssp --C---------------------------
T ss_pred --Cc---CCCC-CCCCCCHHHHHHHHHHhh
Confidence 00 0011 111234568888888653
No 2
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=8.7e-21 Score=151.38 Aligned_cols=80 Identities=43% Similarity=0.662 Sum_probs=75.8
Q ss_pred CCCCCCHHHHHHHHHHhcCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhh
Q 047551 88 GERSYTEEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRH 167 (352)
Q Consensus 88 ~~~~~t~~~~~~~~~~~~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~ 167 (352)
+...|+.++.+.+.++....|||+||||+++|+.++||+|||+|++++||||+..+++.++|+.|++||++|+||.+|+.
T Consensus 8 ~~~~~s~~~~~~~~~~~~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 8 SSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CCCCCCHHHHHHHHHHHTCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred cccCCCHHHHHHHHHHhcCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 34579999999999999999999999999999999999999999999999999999999999999999999999998874
No 3
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.83 E-value=7.1e-21 Score=147.20 Aligned_cols=70 Identities=49% Similarity=0.868 Sum_probs=66.7
Q ss_pred CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcch
Q 047551 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDE 176 (352)
Q Consensus 106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~ 176 (352)
..|||+||||+++++.++||+|||+|++++|||++..+++.+.|+.|++||++|+||.+|..||..|. ++
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~-~~ 71 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGE-EG 71 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCG-GG
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHcc-cc
Confidence 46899999999999999999999999999999999989999999999999999999999999999987 44
No 4
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=1.6e-20 Score=145.52 Aligned_cols=69 Identities=52% Similarity=0.932 Sum_probs=66.4
Q ss_pred cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551 105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL 173 (352)
Q Consensus 105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~ 173 (352)
...|||+||||+++++.++||+|||+|++++|||++..+++.+.|+.|++||++|+||.+|..||..|.
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~ 73 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGS 73 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCc
Confidence 368999999999999999999999999999999999888899999999999999999999999999987
No 5
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=1.9e-20 Score=148.54 Aligned_cols=72 Identities=44% Similarity=0.852 Sum_probs=67.6
Q ss_pred CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhh
Q 047551 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFE 178 (352)
Q Consensus 106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~ 178 (352)
..|||+||||+++|+.++||+|||+|++++|||++..+.+.+.|+.|++||++|+||.+|..||..|. .+..
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~-~~~~ 77 (88)
T 2ctr_A 6 SGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGH-SAFT 77 (88)
T ss_dssp CCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCH-HHHT
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc-cccc
Confidence 68999999999999999999999999999999999888889999999999999999999999999987 4443
No 6
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.80 E-value=2.9e-20 Score=147.51 Aligned_cols=69 Identities=46% Similarity=0.828 Sum_probs=66.7
Q ss_pred cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551 105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL 173 (352)
Q Consensus 105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~ 173 (352)
...|||+||||+++++.++||+|||+|++++|||++..+.+++.|+.|++||++|+||.+|..||..|.
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 83 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGS 83 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCC
Confidence 378999999999999999999999999999999999999999999999999999999999999999987
No 7
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.80 E-value=5.3e-20 Score=140.91 Aligned_cols=68 Identities=44% Similarity=0.802 Sum_probs=62.8
Q ss_pred hcCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551 104 KRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL 173 (352)
Q Consensus 104 ~~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~ 173 (352)
....|||+||||+++++.++||++||+|++++|||+++ ++.+.|+.|++||++|+||.+|..||.+|.
T Consensus 5 ~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~--~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 5 VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNP--DGAEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp -CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCT--TCHHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCc--CHHHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 35789999999999999999999999999999999984 457999999999999999999999999985
No 8
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.80 E-value=4.3e-20 Score=143.36 Aligned_cols=69 Identities=46% Similarity=0.802 Sum_probs=65.6
Q ss_pred cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551 105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL 173 (352)
Q Consensus 105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~ 173 (352)
...|||+||||+++++.++||++||+|++++|||++. .+.+.+.|+.|++||++|+||.+|..||..|.
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 74 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGS 74 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccC
Confidence 3689999999999999999999999999999999997 47889999999999999999999999999987
No 9
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.80 E-value=3.9e-20 Score=148.02 Aligned_cols=72 Identities=40% Similarity=0.727 Sum_probs=65.7
Q ss_pred hcCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhh
Q 047551 104 KRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFE 178 (352)
Q Consensus 104 ~~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~ 178 (352)
....|||+||||+++++.++||+|||+|++++|||++. +..+.|+.|++||+||+||.+|+.||..|. ....
T Consensus 5 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~--~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~-~~~~ 76 (92)
T 2o37_A 5 VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPT--GDTEKFKEISEAFEILNDPQKREIYDQYGL-EAAR 76 (92)
T ss_dssp CSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTT--CCHHHHHHHHHHHHHHTSHHHHHHHHHHCH-HHHH
T ss_pred ccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC--ChHHHHHHHHHHHHHHCCHHHHHHHHHHCH-HHhh
Confidence 35789999999999999999999999999999999984 567899999999999999999999999987 5443
No 10
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=8.5e-20 Score=142.65 Aligned_cols=68 Identities=50% Similarity=0.771 Sum_probs=64.0
Q ss_pred CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCC--CcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAP--GSEEAFKKVCKAFKCLSDDDSRRHYDHVGL 173 (352)
Q Consensus 106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~--~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~ 173 (352)
..|||+||||+++++.++||+|||+|++++|||++... .+++.|+.|++||++|+||.+|..||..|.
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 77 (82)
T 2ej7_A 8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGS 77 (82)
T ss_dssp SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCc
Confidence 58999999999999999999999999999999999753 567899999999999999999999999987
No 11
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=1.7e-19 Score=144.05 Aligned_cols=68 Identities=49% Similarity=0.797 Sum_probs=64.1
Q ss_pred CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCC--CcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAP--GSEEAFKKVCKAFKCLSDDDSRRHYDHVGL 173 (352)
Q Consensus 106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~--~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~ 173 (352)
..|||+||||+++++.++||++||+|++++|||++... .+++.|+.|++||++|+||.+|..||..|.
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~ 77 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGC 77 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCS
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence 57999999999999999999999999999999999753 578899999999999999999999999987
No 12
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=1.9e-19 Score=149.18 Aligned_cols=68 Identities=38% Similarity=0.674 Sum_probs=65.2
Q ss_pred CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL 173 (352)
Q Consensus 106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~ 173 (352)
..|||+||||+++|+.++||+|||+|++++||||+. .+.+++.|+.|++||+||+||.+|..||..|.
T Consensus 19 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 87 (112)
T 2ctq_A 19 TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRR 87 (112)
T ss_dssp CCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhh
Confidence 589999999999999999999999999999999997 68899999999999999999999999999875
No 13
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.77 E-value=1.5e-19 Score=146.80 Aligned_cols=67 Identities=46% Similarity=0.753 Sum_probs=62.9
Q ss_pred CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCC--CcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAP--GSEEAFKKVCKAFKCLSDDDSRRHYDHVGL 173 (352)
Q Consensus 107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~--~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~ 173 (352)
.|||+||||+++|+.++||+|||+|++++|||+++.. .+++.|+.|++||++|+||.+|..||..|.
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~ 70 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGR 70 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence 5899999999999999999999999999999999754 378899999999999999999999999876
No 14
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=3.9e-19 Score=144.08 Aligned_cols=69 Identities=29% Similarity=0.550 Sum_probs=64.8
Q ss_pred cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551 105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL 173 (352)
Q Consensus 105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~ 173 (352)
...|||+||||+++|+.++||+|||+|++++|||++. .+.+.+.|+.|++||+||+||.+|..||....
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 84 (99)
T 2yua_A 15 SRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLL 84 (99)
T ss_dssp CSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred CccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 3689999999999999999999999999999999996 57789999999999999999999999999765
No 15
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.76 E-value=1.8e-19 Score=144.21 Aligned_cols=69 Identities=32% Similarity=0.629 Sum_probs=64.0
Q ss_pred cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCC-------CCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551 105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-------PGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL 173 (352)
Q Consensus 105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~-------~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~ 173 (352)
...|||+||||+++|+.++||+|||+|++++|||++.. +.+.+.|+.|++||+||+||.+|+.||....
T Consensus 14 ~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 47899999999999999999999999999999999863 4578999999999999999999999998765
No 16
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.76 E-value=3.7e-20 Score=180.02 Aligned_cols=68 Identities=41% Similarity=0.711 Sum_probs=0.0
Q ss_pred CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL 173 (352)
Q Consensus 106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~ 173 (352)
..|||+||||+++|+.++||+|||+||++||||+|+.+.|+++|+.|++||++|+||.+|+.||.++.
T Consensus 27 ~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 94 (329)
T 3lz8_A 27 LKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQ 94 (329)
T ss_dssp --------------------------------------------------------------------
T ss_pred ccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhc
Confidence 47999999999999999999999999999999999988999999999999999999999999999854
No 17
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.75 E-value=5e-19 Score=145.94 Aligned_cols=69 Identities=38% Similarity=0.740 Sum_probs=65.2
Q ss_pred cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551 105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL 173 (352)
Q Consensus 105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~ 173 (352)
...|||+||||+++|+.++||+|||+|++++|||++. .+.+.+.|+.|++||+||+||.+|+.||.+|.
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~ 84 (109)
T 2ctw_A 15 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGS 84 (109)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcc
Confidence 3689999999999999999999999999999999997 46788999999999999999999999999987
No 18
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.72 E-value=1e-18 Score=143.84 Aligned_cols=69 Identities=33% Similarity=0.527 Sum_probs=64.6
Q ss_pred cCCCchhhcCcCCCC-CHHHHHHHHHHhhhhhCCCCCCC----CCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551 105 RNKDYYAILGVERSC-SVEEIRKAYRKLSLKVHPDKNKA----PGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL 173 (352)
Q Consensus 105 ~~~d~Y~iLgv~~~a-~~~eIkkaYrkla~~~HPDk~~~----~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~ 173 (352)
...|||+||||+++| +.++||+|||+|++++|||++.. +.+.+.|+.|++||++|+||.+|+.||..+.
T Consensus 13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 478999999999999 99999999999999999999875 5678999999999999999999999998765
No 19
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.72 E-value=6.5e-18 Score=152.13 Aligned_cols=67 Identities=43% Similarity=0.864 Sum_probs=64.4
Q ss_pred CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL 173 (352)
Q Consensus 107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~ 173 (352)
.|||+||||+++|+.++||+|||+|++++||||++ .+.+.++|+.|++||++|+||.+|+.||.+|.
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~ 69 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGE 69 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcc
Confidence 58999999999999999999999999999999995 67899999999999999999999999999987
No 20
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.69 E-value=1.3e-17 Score=145.34 Aligned_cols=68 Identities=32% Similarity=0.650 Sum_probs=63.2
Q ss_pred CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCC-------cHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG-------SEEAFKKVCKAFKCLSDDDSRRHYDHVGL 173 (352)
Q Consensus 106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~-------a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~ 173 (352)
..|||+||||+++++.++||+|||+|++++||||+.... +.+.|+.|++||+||+||.+|+.||..+.
T Consensus 9 ~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 9 KKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 579999999999999999999999999999999998654 46899999999999999999999998764
No 21
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.68 E-value=6e-18 Score=140.77 Aligned_cols=65 Identities=34% Similarity=0.425 Sum_probs=60.9
Q ss_pred CCCchhhcCcCCCCCH--HHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551 106 NKDYYAILGVERSCSV--EEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL 173 (352)
Q Consensus 106 ~~d~Y~iLgv~~~a~~--~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~ 173 (352)
..|||+||||+++|+. ++||+|||+|++++||||++. +++|+.|++||+||+||.+|+.||.+|.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 4689999999999999 999999999999999999854 6899999999999999999999998875
No 22
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.65 E-value=5.2e-17 Score=126.48 Aligned_cols=63 Identities=21% Similarity=0.398 Sum_probs=57.5
Q ss_pred CCchhhcCcCCC--CCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551 107 KDYYAILGVERS--CSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL 173 (352)
Q Consensus 107 ~d~Y~iLgv~~~--a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~ 173 (352)
.++|+||||+++ ++.++||+|||+|++++|||++ ++.+.|+.|++||++|+|+.+|..++ +|.
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~---~~~~~f~~i~~AYe~L~~~~~r~~~~-~g~ 75 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG---GSHALMQELNSLWGTFKTEVYNLRMN-LGG 75 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGS---CCHHHHHHHHHHHHHHHHHHHHHTTC-CSS
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC---CCHHHHHHHHHHHHHHhhHHHHHHHh-cCC
Confidence 578999999999 9999999999999999999997 56899999999999999999999844 444
No 23
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.64 E-value=2.7e-17 Score=146.11 Aligned_cols=65 Identities=34% Similarity=0.458 Sum_probs=58.4
Q ss_pred CCCchhhcCcCCCCC--HHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551 106 NKDYYAILGVERSCS--VEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL 173 (352)
Q Consensus 106 ~~d~Y~iLgv~~~a~--~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~ 173 (352)
..|||+||||+++|+ .++||+|||+||+++|||++++ +++|+.|++||++|+||.+|+.||.+|.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~---~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C---CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 478999999999998 6999999999999999999854 5799999999999999999999999986
No 24
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.63 E-value=1.4e-16 Score=141.64 Aligned_cols=67 Identities=18% Similarity=0.329 Sum_probs=61.2
Q ss_pred CCCchhhcCcCCCCC--HHHHHHHHHHhhhhhCCCCCCCCC------cHHHHHHHHHHHHhcCchhhhhhhcccC
Q 047551 106 NKDYYAILGVERSCS--VEEIRKAYRKLSLKVHPDKNKAPG------SEEAFKKVCKAFKCLSDDDSRRHYDHVG 172 (352)
Q Consensus 106 ~~d~Y~iLgv~~~a~--~~eIkkaYrkla~~~HPDk~~~~~------a~e~f~~I~~Ay~vLsd~~kR~~YD~~g 172 (352)
..|||+||||+++++ ..+||++||+|++++||||+.... +.+.|+.|++||+||+||.+|+.||...
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 77 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSL 77 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHc
Confidence 579999999999988 999999999999999999997655 5689999999999999999999999753
No 25
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.60 E-value=1e-16 Score=127.42 Aligned_cols=60 Identities=27% Similarity=0.307 Sum_probs=55.0
Q ss_pred CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCC--CcHHHHHHHHHHHHhcCchhhh
Q 047551 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAP--GSEEAFKKVCKAFKCLSDDDSR 165 (352)
Q Consensus 106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~--~a~e~f~~I~~Ay~vLsd~~kR 165 (352)
..++|+||||+++|+.++||+|||+|+++||||+++.. .+++.|+.|++||++|+|...|
T Consensus 15 ~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 46789999999999999999999999999999999753 4789999999999999998766
No 26
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.60 E-value=2.9e-16 Score=139.32 Aligned_cols=67 Identities=18% Similarity=0.311 Sum_probs=60.9
Q ss_pred CCchhhcCcCCCC--CHHHHHHHHHHhhhhhCCCCCCCCC------cHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551 107 KDYYAILGVERSC--SVEEIRKAYRKLSLKVHPDKNKAPG------SEEAFKKVCKAFKCLSDDDSRRHYDHVGL 173 (352)
Q Consensus 107 ~d~Y~iLgv~~~a--~~~eIkkaYrkla~~~HPDk~~~~~------a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~ 173 (352)
.|||+||||++++ +..+||++||+|++++||||++... |.+.|+.|++||+||+||.+|+.||....
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 3799999999999 9999999999999999999997654 34689999999999999999999998643
No 27
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.60 E-value=2.1e-16 Score=141.28 Aligned_cols=62 Identities=24% Similarity=0.454 Sum_probs=58.6
Q ss_pred CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCC----cHHHHHHHHHHHHhcCchhhhhhh
Q 047551 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG----SEEAFKKVCKAFKCLSDDDSRRHY 168 (352)
Q Consensus 107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~----a~e~f~~I~~Ay~vLsd~~kR~~Y 168 (352)
.|||+||||+++|+.++||+|||+|++++||||+.... |++.|+.|++||+||+|+.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 69999999999999999999999999999999997654 788999999999999999999987
No 28
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.58 E-value=2.2e-16 Score=129.66 Aligned_cols=58 Identities=21% Similarity=0.378 Sum_probs=52.5
Q ss_pred cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCC--------cHHHHHHHHHHHHhcCchh
Q 047551 105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG--------SEEAFKKVCKAFKCLSDDD 163 (352)
Q Consensus 105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~--------a~e~f~~I~~Ay~vLsd~~ 163 (352)
...|||+|||++. |+.++||+|||+|++++||||++.++ |+++|+.|++||+||+|+.
T Consensus 39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 3579999999996 99999999999999999999987543 4789999999999999975
No 29
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.58 E-value=7.7e-16 Score=140.50 Aligned_cols=66 Identities=29% Similarity=0.413 Sum_probs=59.7
Q ss_pred CCCchhhcCcCCC--CCHHHHHHHHHHhhhhhCCCCCCCCC------cHHHHHHHHHHHHhcCchhhhhhhccc
Q 047551 106 NKDYYAILGVERS--CSVEEIRKAYRKLSLKVHPDKNKAPG------SEEAFKKVCKAFKCLSDDDSRRHYDHV 171 (352)
Q Consensus 106 ~~d~Y~iLgv~~~--a~~~eIkkaYrkla~~~HPDk~~~~~------a~e~f~~I~~Ay~vLsd~~kR~~YD~~ 171 (352)
..|||+||||+++ ++..+||++||+|++++|||++.... |.+.|+.|++||+||+||.+|+.||..
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~ 115 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLK 115 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 6899999999986 79999999999999999999997543 456799999999999999999999953
No 30
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.57 E-value=3.7e-16 Score=125.09 Aligned_cols=55 Identities=24% Similarity=0.410 Sum_probs=50.7
Q ss_pred CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCC----cHHHHHHHHHHHHhcCc
Q 047551 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG----SEEAFKKVCKAFKCLSD 161 (352)
Q Consensus 107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~----a~e~f~~I~~Ay~vLsd 161 (352)
.++|+||||+++|+.++||+|||++|+++|||||+... |+++|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999999999999999999997543 78899999999999975
No 31
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.55 E-value=1.3e-15 Score=116.16 Aligned_cols=56 Identities=27% Similarity=0.367 Sum_probs=52.0
Q ss_pred CCchhhcCcCC-CCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhh
Q 047551 107 KDYYAILGVER-SCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSR 165 (352)
Q Consensus 107 ~d~Y~iLgv~~-~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR 165 (352)
.++|+||||++ +++.++||+|||+|++++|||++ ++.+.|+.|++||++|+|+..|
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~---g~~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKG---GSPFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGT---CCHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCC---CCHHHHHHHHHHHHHHhhhhhc
Confidence 57899999999 79999999999999999999996 6778999999999999998766
No 32
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.53 E-value=2e-15 Score=135.12 Aligned_cols=66 Identities=23% Similarity=0.380 Sum_probs=60.1
Q ss_pred cCCCchhhc------CcCC-CCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccC
Q 047551 105 RNKDYYAIL------GVER-SCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG 172 (352)
Q Consensus 105 ~~~d~Y~iL------gv~~-~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g 172 (352)
...|||+|| |+++ +++..+||++||+|++++|||+++. +.+.|+.|++||+||+||.+|+.||...
T Consensus 9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 368999999 4665 8999999999999999999999865 8889999999999999999999999843
No 33
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.52 E-value=2e-14 Score=138.44 Aligned_cols=145 Identities=26% Similarity=0.329 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHH-HHHhcCCCCCCCCCCCcccccccccCCCcccccccCCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLA-ACEKLGVGDSGPNVSSADEKRLDDQRSKPGLEKLGEGLS 87 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (352)
-...+|..+...|++++|+.++.+|+.++|+.. +...+. .+..++ ....+. . ....+-...+
T Consensus 297 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~--~~~~A~--------~------~~~~al~~~p 360 (450)
T 2y4t_A 297 SKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEE--MYDEAI--------Q------DYETAQEHNE 360 (450)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--CHHHHH--------H------HHHHHHTTSS
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhc--CHHHHH--------H------HHHHHHHhCc
Confidence 456678888999999999999999999999753 322222 222221 100000 0 0000000000
Q ss_pred CCCCCCHHHH---HHHHHHhcCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCC----cHHHHHHHHHHHHhcC
Q 047551 88 GERSYTEEHV---ELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG----SEEAFKKVCKAFKCLS 160 (352)
Q Consensus 88 ~~~~~t~~~~---~~~~~~~~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~----a~e~f~~I~~Ay~vLs 160 (352)
.... .-..+ ....+.....++|++||+.+.++.++|+++|+++++++|||+.+.+. +++.|+.|++||++|+
T Consensus 361 ~~~~-~~~~l~~~~~~~~~~~~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~ 439 (450)
T 2y4t_A 361 NDQQ-IREGLEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLS 439 (450)
T ss_dssp SCHH-HHHHHHHHHHHHHHHHSCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSS
T ss_pred chHH-HHHHHHHHHHHhhcccchhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhC
Confidence 0000 00011 11112234679999999999999999999999999999999987644 7889999999999999
Q ss_pred chhhhhhhccc
Q 047551 161 DDDSRRHYDHV 171 (352)
Q Consensus 161 d~~kR~~YD~~ 171 (352)
||++|..||.+
T Consensus 440 d~~~r~~yd~g 450 (450)
T 2y4t_A 440 DPEMRKKFDDG 450 (450)
T ss_dssp GGGGC------
T ss_pred CHHHHHhccCC
Confidence 99999999973
No 34
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.48 E-value=3.6e-15 Score=158.35 Aligned_cols=73 Identities=41% Similarity=0.830 Sum_probs=40.9
Q ss_pred cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhh
Q 047551 105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFE 178 (352)
Q Consensus 105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~ 178 (352)
...|||+||||+++|+.++||+|||+|++++||||++ .+.++++|+.|++||++|+||.+|+.||.+|. .+..
T Consensus 19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~-~~~~ 92 (780)
T 3apo_A 19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGE-KGLE 92 (780)
T ss_dssp ----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-------
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcc-cccc
Confidence 4789999999999999999999999999999999995 67889999999999999999999999999997 5443
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.69 E-value=1.3e-08 Score=76.11 Aligned_cols=49 Identities=27% Similarity=0.243 Sum_probs=45.8
Q ss_pred hhhcCcCCC---CCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCc
Q 047551 110 YAILGVERS---CSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSD 161 (352)
Q Consensus 110 Y~iLgv~~~---a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd 161 (352)
|.||||+++ ++.++|+++||+|....||||. |......+|++|+++|..
T Consensus 7 ~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG---GS~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 7 CKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG---GSFYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT---CCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHHH
Confidence 789999999 9999999999999999999996 788899999999999864
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.14 E-value=0.00028 Score=73.59 Aligned_cols=133 Identities=13% Similarity=0.074 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCC-CCCCCCcccccccccCCCccccc---ccC
Q 047551 9 LRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDS-GPNVSSADEKRLDDQRSKPGLEK---LGE 84 (352)
Q Consensus 9 ~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~~~~ll~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~ 84 (352)
.-...+|..++..|++++|+..+++|++++|... ...+.....+-.+.. ..+. ... .....+. ...
T Consensus 535 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~-~a~~~~~~~~~~~~~~~~~~--~~~-------~~~A~~~l~~~~~ 604 (681)
T 2pzi_A 535 SAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFT-TARLTSAVTLLSGRSTSEVT--EEQ-------IRDAARRVEALPP 604 (681)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHH-HHHHHHHHHTC-------CC--HHH-------HHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccH-HHHHHHHHHHHccCCCCCCC--HHH-------HHHHHHHHhhCCC
Confidence 3467788888999999999999999999999843 222222222211010 0000 000 0000000 000
Q ss_pred CCCCCCCCCHHHHHHHH--HHhcCCCchhhcCcCCCCCH--HHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHh
Q 047551 85 GLSGERSYTEEHVELIR--QIKRNKDYYAILGVERSCSV--EEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKC 158 (352)
Q Consensus 85 ~~~~~~~~t~~~~~~~~--~~~~~~d~Y~iLgv~~~a~~--~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~v 158 (352)
.......+..+..+... ...+..|||.|||++.+... .+|+++||+||+..+++ .+.+..|..|..|
T Consensus 605 ~~~~~~~l~~~ll~~~l~~~~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 605 TEPRVLQIRALVLGGALDWLKDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV 675 (681)
T ss_dssp TSTTHHHHHHHHHHHHHHHHTSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence 00000001111111111 23447889999999776655 77999999999965554 5788888888876
No 37
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=93.91 E-value=0.14 Score=40.89 Aligned_cols=40 Identities=15% Similarity=0.070 Sum_probs=36.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 3 GNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 3 ~NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
-|.+.|+...+.+..+++.|++++|+..+.+|++++|...
T Consensus 8 inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~ 47 (126)
T 4gco_A 8 INPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENA 47 (126)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 4678888899999999999999999999999999999854
No 38
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=93.68 E-value=0.091 Score=43.13 Aligned_cols=48 Identities=13% Similarity=0.144 Sum_probs=39.3
Q ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHH
Q 047551 3 GNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAAC 50 (352)
Q Consensus 3 ~NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~ 50 (352)
.+.+.+.....+|..+++.|++++|++++++|++++|+.. +...+..+
T Consensus 26 ~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~ 74 (150)
T 4ga2_A 26 SPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLL 74 (150)
T ss_dssp SHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3456677788999999999999999999999999999865 44455444
No 39
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=93.48 E-value=0.16 Score=40.36 Aligned_cols=38 Identities=16% Similarity=0.082 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
.|.|....+++..+++.|++++|+.++.+|++++|+..
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~ 42 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNI 42 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 47788888999999999999999999999999999854
No 40
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=92.77 E-value=0.25 Score=38.21 Aligned_cols=37 Identities=11% Similarity=-0.084 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+.|..+..+|..++..|++++|+..+.+|++++|+..
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~ 38 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDA 38 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh
Confidence 4678899999999999999999999999999999854
No 41
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=91.80 E-value=0.27 Score=37.19 Aligned_cols=45 Identities=13% Similarity=0.177 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHH
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAAC 50 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~ 50 (352)
+.+.-+..+|..++..|++++|++.+++|++++|+.. +...|..+
T Consensus 5 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~ 50 (100)
T 3ma5_A 5 EDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKL 50 (100)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 3455678899999999999999999999999999865 44444444
No 42
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=91.60 E-value=0.33 Score=36.02 Aligned_cols=36 Identities=6% Similarity=-0.050 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
.+..+..+|..++..|++++|++.+.+|++++|...
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~ 38 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNP 38 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH
Confidence 567788999999999999999999999999999854
No 43
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=91.38 E-value=0.43 Score=38.89 Aligned_cols=40 Identities=13% Similarity=0.086 Sum_probs=36.3
Q ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 3 GNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 3 ~NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
.+.+.|..+..+|..++..|++++|+..+.+|++++|+..
T Consensus 6 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~ 45 (164)
T 3sz7_A 6 APTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANP 45 (164)
T ss_dssp SCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred hhhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCH
Confidence 3567888999999999999999999999999999999854
No 44
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=90.71 E-value=0.34 Score=38.53 Aligned_cols=31 Identities=23% Similarity=0.072 Sum_probs=17.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
+..+|..++..|++++|+..+++|++++|+.
T Consensus 50 ~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 80 (126)
T 4gco_A 50 YSNRAACLTKLMEFQRALDDCDTCIRLDSKF 80 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHhhHHHhhccHHHHHHHHHHHHHhhhhh
Confidence 4455555555566666666666666665553
No 45
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=90.62 E-value=0.73 Score=36.74 Aligned_cols=40 Identities=15% Similarity=0.068 Sum_probs=36.1
Q ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 3 GNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 3 ~NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
.+.+.+.....+|..++..|++++|++.+.++++++|+..
T Consensus 13 ~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~ 52 (142)
T 2xcb_A 13 LSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDA 52 (142)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccH
Confidence 4567788899999999999999999999999999999854
No 46
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=90.46 E-value=0.36 Score=39.68 Aligned_cols=36 Identities=14% Similarity=0.148 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
.+.-...++..++..|++++|++.+++|++++|+..
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~ 39 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNV 39 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 355678899999999999999999999999999854
No 47
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=90.27 E-value=0.8 Score=32.55 Aligned_cols=37 Identities=16% Similarity=0.238 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+.+.-+..+|..++..|++++|++++.+|++++|...
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~ 43 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA 43 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH
Confidence 3566788899999999999999999999999999854
No 48
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=90.09 E-value=0.49 Score=37.48 Aligned_cols=38 Identities=5% Similarity=-0.010 Sum_probs=29.4
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCCHHHHHHHH
Q 047551 13 RIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAAC 50 (352)
Q Consensus 13 ~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~~~~ll~~~ 50 (352)
.++..+...|++++|++++.+|+.++|++++...|..+
T Consensus 88 ~lg~~~~~~~~~~~A~~~~~kal~~~~~~~~~~~l~~l 125 (127)
T 4gcn_A 88 RAGNAFQKQNDLSLAVQWFHRSLSEFRDPELVKKVKEL 125 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCcCHHHHHHHHHh
Confidence 34555677899999999999999999997655445444
No 49
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=90.00 E-value=0.63 Score=35.87 Aligned_cols=31 Identities=16% Similarity=0.186 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLN 38 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~ 38 (352)
|+-|.+|+..++..|++..|+.|+++|+++.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~ 35 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQL 35 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhh
Confidence 5679999999999999999999999999986
No 50
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=89.98 E-value=0.71 Score=39.51 Aligned_cols=44 Identities=14% Similarity=0.101 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHHHh
Q 047551 9 LRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAACEK 52 (352)
Q Consensus 9 ~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~~~ 52 (352)
+-+..+|..+++.|||++|+++++++++++|... +..|...++.
T Consensus 72 d~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~ 116 (152)
T 1pc2_A 72 DYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDK 116 (152)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 3467788999999999999999999999999765 7777777754
No 51
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=89.86 E-value=0.87 Score=37.89 Aligned_cols=41 Identities=12% Similarity=-0.044 Sum_probs=36.8
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 2 DGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 2 e~NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+-+.+.+.-+..+|..+++.|++++|+..+.+|++++|...
T Consensus 30 ~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~ 70 (151)
T 3gyz_A 30 AIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNV 70 (151)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 34667788899999999999999999999999999999865
No 52
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=89.79 E-value=0.63 Score=34.24 Aligned_cols=37 Identities=16% Similarity=0.190 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+.+..+..+|..++..|++++|++++++++.++|+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 38 (118)
T 1elw_A 2 EQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNH 38 (118)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH
Confidence 3567788999999999999999999999999999753
No 53
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=88.99 E-value=0.67 Score=32.98 Aligned_cols=32 Identities=16% Similarity=0.260 Sum_probs=28.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+..+|..++..|++++|++.+.+|++++|+..
T Consensus 46 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 77 (91)
T 1na3_A 46 WYNLGNAYYKQGDYDEAIEYYQKALELDPNNA 77 (91)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCH
Confidence 45677888999999999999999999999864
No 54
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=88.97 E-value=0.35 Score=41.65 Aligned_cols=37 Identities=14% Similarity=0.142 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
..+|..++.++...++.|+++.|+..+.||++++|+.
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~ 44 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTM 44 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCC
Confidence 4678899999999999999999999999999999994
No 55
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=88.00 E-value=1.3 Score=33.12 Aligned_cols=37 Identities=22% Similarity=0.225 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+.|..+..+|..++..|++++|+..+.+|+.++|...
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~ 38 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNM 38 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccH
Confidence 4567789999999999999999999999999999854
No 56
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=87.74 E-value=1.2 Score=34.19 Aligned_cols=38 Identities=16% Similarity=0.074 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
.+.+.-...+|..++..|++++|++.+++|++++|+..
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 61 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQ 61 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCch
Confidence 45556678889999999999999999999999999864
No 57
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=87.69 E-value=1.5 Score=35.58 Aligned_cols=40 Identities=18% Similarity=0.037 Sum_probs=35.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 3 GNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 3 ~NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
.+.+.+.....+|..++..|++++|+..+.+|+.++|+..
T Consensus 16 ~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~ 55 (148)
T 2vgx_A 16 ISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDS 55 (148)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccH
Confidence 4566777889999999999999999999999999999854
No 58
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=87.35 E-value=0.68 Score=35.79 Aligned_cols=38 Identities=13% Similarity=-0.041 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
...+..+..+|..++..|+++.|+..+.+|++++|+..
T Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~ 43 (137)
T 3q49_B 6 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVA 43 (137)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred cccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcH
Confidence 34567789999999999999999999999999999854
No 59
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=87.12 E-value=0.84 Score=34.67 Aligned_cols=36 Identities=14% Similarity=0.156 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
.+.-+..+|..++..|++++|++.+.+|++++|...
T Consensus 18 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 53 (115)
T 2kat_A 18 NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYS 53 (115)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcH
Confidence 445577889999999999999999999999999864
No 60
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=86.95 E-value=1 Score=33.68 Aligned_cols=43 Identities=16% Similarity=0.118 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCHHHHHHHH
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAAC 50 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~~~~ll~~~ 50 (352)
+.-+..+|..++..|++++|++++.++++++|+..+...+..+
T Consensus 79 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~ 121 (131)
T 1elr_A 79 AKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQA 121 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 4456777888999999999999999999999975555555544
No 61
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=86.80 E-value=1.3 Score=36.61 Aligned_cols=42 Identities=14% Similarity=0.152 Sum_probs=36.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHHHh
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAACEK 52 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~~~ 52 (352)
..-+|..+++.|||++|+++++..+++.|... +..|...++.
T Consensus 77 lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~ 119 (126)
T 1nzn_A 77 VFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDK 119 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 55789999999999999999999999999765 7777777754
No 62
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=86.73 E-value=1.1 Score=35.02 Aligned_cols=41 Identities=5% Similarity=-0.077 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHH
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAAC 50 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~ 50 (352)
..+.+|..++..|++++|+..+++|++++|+.. +...+..+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~ 60 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLT 60 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 467889999999999999999999999999854 44344433
No 63
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=86.53 E-value=1.6 Score=33.18 Aligned_cols=31 Identities=13% Similarity=-0.113 Sum_probs=18.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
...+|..++..|++++|+..+.++++++|+.
T Consensus 42 ~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~ 72 (129)
T 2xev_A 42 LYWLGESYYATRNFQLAEAQFRDLVSRYPTH 72 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHCCCC
Confidence 4445566666666666666666666666654
No 64
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=86.42 E-value=1.6 Score=32.47 Aligned_cols=39 Identities=23% Similarity=0.180 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 4 NKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 4 NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+...+.-...+|..++..|++++|+.++.+++.++|+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 46 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANA 46 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCH
Confidence 456677889999999999999999999999999999753
No 65
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.81 E-value=0.76 Score=35.63 Aligned_cols=37 Identities=16% Similarity=0.073 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
.+.+..+..+|..++..|++++|++.++++++++|+.
T Consensus 25 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~ 61 (148)
T 2dba_A 25 ASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATP 61 (148)
T ss_dssp CCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCH
T ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccc
Confidence 3567788999999999999999999999999999984
No 66
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=85.60 E-value=1.4 Score=32.19 Aligned_cols=33 Identities=21% Similarity=0.138 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
-...+|..++..|++++|++.+.+|++++|+..
T Consensus 37 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 69 (99)
T 2kc7_A 37 AYYLMGNAYRKLGDWQKALNNYQSAIELNPDSP 69 (99)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence 345567777888888888888888888888765
No 67
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=85.44 E-value=0.78 Score=33.89 Aligned_cols=32 Identities=16% Similarity=0.143 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
-+..+|..++..|++++|++.+.+|++++|+.
T Consensus 40 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 40 GYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 35567788899999999999999999999986
No 68
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=85.29 E-value=0.28 Score=40.76 Aligned_cols=47 Identities=17% Similarity=0.186 Sum_probs=35.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHH
Q 047551 3 GNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAA 49 (352)
Q Consensus 3 ~NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~ 49 (352)
+|.......+..|..++..|++++|+..+++|++++|+.. +...+..
T Consensus 1 ~~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~ 48 (176)
T 2r5s_A 1 SNASPDEQLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKAD 48 (176)
T ss_dssp -----CTTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence 4667777789999999999999999999999999999865 3333433
No 69
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=85.14 E-value=1.3 Score=34.78 Aligned_cols=32 Identities=13% Similarity=0.016 Sum_probs=28.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+..+|..++..|++++|+..+++|++++|+..
T Consensus 54 ~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 85 (121)
T 1hxi_A 54 WRSLGLTQAENEKDGLAIIALNHARMLDPKDI 85 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 45567778899999999999999999999864
No 70
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=85.13 E-value=1.5 Score=32.03 Aligned_cols=33 Identities=12% Similarity=-0.023 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 9 LRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 9 ~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
.-+..+|..++..|++++|+..+.+++.++|+.
T Consensus 39 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 71 (118)
T 1elw_A 39 VLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW 71 (118)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHhCccc
Confidence 345666777777788888888888888887764
No 71
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.90 E-value=2.1 Score=33.00 Aligned_cols=34 Identities=12% Similarity=-0.126 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
+.-+..+|..++..|++++|+..+.++++++|+.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 98 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD 98 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC
Confidence 4556667777777777777777777777777764
No 72
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=84.88 E-value=2 Score=32.32 Aligned_cols=41 Identities=17% Similarity=0.314 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCHHHHHHHHHh
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEK 52 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~~~~ll~~~~~ 52 (352)
..+.+++..+..|+++.|...+-+|+++||.+ .+||..+++
T Consensus 19 ~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP--~~LL~i~q~ 59 (73)
T 3ax2_A 19 EEIQLGEELLAQGDYEKGVDHLTNAIAVCGQP--QQLLQVLQQ 59 (73)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSC--HHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCH--HHHHHHHHh
Confidence 56899999999999999999999999999994 335655543
No 73
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=84.53 E-value=2.3 Score=33.49 Aligned_cols=38 Identities=21% Similarity=0.158 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
.+.+..+..+|..++..|++++|++.+.+|++++|...
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~ 47 (166)
T 1a17_A 10 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNA 47 (166)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCh
Confidence 35678889999999999999999999999999999853
No 74
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=84.37 E-value=1.9 Score=36.22 Aligned_cols=42 Identities=12% Similarity=0.089 Sum_probs=36.2
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHHHh
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAACEK 52 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~~~ 52 (352)
+.-+|..+++.|||++|+++++..+++.|... +..|...|+.
T Consensus 81 LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~Ie~ 123 (134)
T 3o48_A 81 LYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVED 123 (134)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Confidence 55678889999999999999999999999876 7777777754
No 75
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=84.27 E-value=1 Score=32.97 Aligned_cols=32 Identities=16% Similarity=0.139 Sum_probs=28.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
.+..|..++..|++++|++.+++|++++|+..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~ 34 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGK 34 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcH
Confidence 46788999999999999999999999999853
No 76
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=84.07 E-value=1.6 Score=33.53 Aligned_cols=33 Identities=12% Similarity=-0.108 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
-+..+|..++..|++++|+..+.+|++++|+..
T Consensus 40 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~ 72 (126)
T 3upv_A 40 GYSNRAAALAKLMSFPEAIADCNKAIEKDPNFV 72 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcH
Confidence 355678888999999999999999999999864
No 77
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=83.91 E-value=2 Score=35.04 Aligned_cols=41 Identities=12% Similarity=0.184 Sum_probs=28.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHHH
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAACE 51 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~~ 51 (352)
+..+|..++..|++++|+..+.++++++|+.. ...++..+.
T Consensus 118 ~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i~ 159 (177)
T 2e2e_A 118 LMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVESIN 159 (177)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Confidence 44566667778888888888888888888654 444555443
No 78
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=83.85 E-value=1.7 Score=35.05 Aligned_cols=30 Identities=7% Similarity=0.044 Sum_probs=14.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDN 40 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~ 40 (352)
+..+|..++..|++++|+..+.+|++++|+
T Consensus 66 ~~nla~~~~~~~~~~~A~~~~~~al~~~p~ 95 (162)
T 3rkv_A 66 YANMSQCYLNIGDLHEAEETSSEVLKREET 95 (162)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHhcCCc
Confidence 344444444555555555555555555544
No 79
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=83.65 E-value=2.9 Score=34.92 Aligned_cols=37 Identities=14% Similarity=-0.003 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+.+..+..+|..++..|++++|++.+.+|++++|...
T Consensus 36 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~ 72 (198)
T 2fbn_A 36 QSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTE 72 (198)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccc
Confidence 4677889999999999999999999999999999865
No 80
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=83.62 E-value=1.9 Score=34.23 Aligned_cols=32 Identities=13% Similarity=0.085 Sum_probs=28.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+..+|..++..|++++|+..+.+|++++|+..
T Consensus 55 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 86 (142)
T 2xcb_A 55 FLGLGACRQSLGLYEQALQSYSYGALMDINEP 86 (142)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCc
Confidence 45667888999999999999999999999876
No 81
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=83.44 E-value=2.4 Score=32.09 Aligned_cols=32 Identities=22% Similarity=0.170 Sum_probs=29.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
...+|..++..|++++|+..+.++++++|+..
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~ 36 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPNGV 36 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSST
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCc
Confidence 56789999999999999999999999999876
No 82
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=83.38 E-value=2.2 Score=33.67 Aligned_cols=41 Identities=17% Similarity=0.319 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCHHHHHHHHHh
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEK 52 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~~~~ll~~~~~ 52 (352)
..+.+++..+..|+++.|+..+-+|+++||. ..+||.+++.
T Consensus 22 ~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~q--P~~LL~i~q~ 62 (95)
T 1om2_A 22 EEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ--PQQLLQVLQQ 62 (95)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHSC--HHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC--HHHHHHHHHh
Confidence 5689999999999999999999999999999 4446666543
No 83
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=83.05 E-value=1.6 Score=32.85 Aligned_cols=32 Identities=19% Similarity=-0.093 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
-+..+|..++..|++++|++++++|++++|+.
T Consensus 52 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~ 83 (133)
T 2lni_A 52 LYSNRAACYTKLLEFQLALKDCEECIQLEPTF 83 (133)
T ss_dssp HHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc
Confidence 34555666666666666666666666666653
No 84
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=83.01 E-value=1.9 Score=35.72 Aligned_cols=32 Identities=19% Similarity=0.079 Sum_probs=28.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+..+|..+...|++++|+..+.+|++++|+..
T Consensus 73 ~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~ 104 (151)
T 3gyz_A 73 IMGLAAIYQIKEQFQQAADLYAVAFALGKNDY 104 (151)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHhhCCCCc
Confidence 45567778899999999999999999999866
No 85
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=83.00 E-value=2.3 Score=36.09 Aligned_cols=42 Identities=12% Similarity=0.089 Sum_probs=36.0
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHHHh
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAACEK 52 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~~~ 52 (352)
+.-+|..+++.|||++|+++++..++++|... +..|...++.
T Consensus 80 LYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~Ie~ 122 (144)
T 1y8m_A 80 LYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVED 122 (144)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 45678899999999999999999999999875 7777777754
No 86
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=82.93 E-value=2.2 Score=32.02 Aligned_cols=35 Identities=23% Similarity=0.160 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
.+..+..+|..++..|++++|++.+.++++++|..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~ 49 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKD 49 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTC
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Confidence 44568889999999999999999999999999975
No 87
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=82.70 E-value=3 Score=31.92 Aligned_cols=32 Identities=16% Similarity=0.119 Sum_probs=28.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
...+|..+++.|++++|+.++++|+++.|+..
T Consensus 49 ~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~ 80 (104)
T 2v5f_A 49 LDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ 80 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH
Confidence 45678888999999999999999999999975
No 88
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=82.69 E-value=3.2 Score=29.93 Aligned_cols=30 Identities=3% Similarity=0.036 Sum_probs=20.0
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDN 40 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~ 40 (352)
+..+|..++..|++++|+..+.+|++++|.
T Consensus 43 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 43 WLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 344555666677777777777777777776
No 89
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=82.58 E-value=2.6 Score=32.20 Aligned_cols=34 Identities=15% Similarity=-0.008 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHcCC---HHHHHHHHHHHHhhCCCC
Q 047551 8 ALRCIRIAEEAIASGK---KQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd---~~~A~kf~~kA~~L~P~~ 41 (352)
+......|+..+-.++ .++|+.++.+|++++|+.
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~ 42 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYN 42 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCC
Confidence 3344444544443333 455555555555555553
No 90
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=82.34 E-value=2 Score=40.70 Aligned_cols=37 Identities=19% Similarity=0.193 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
++.|..++.+|..++..|++++|++.+.++++++|+.
T Consensus 3 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~ 39 (514)
T 2gw1_A 3 DKYALALKDKGNQFFRNKKYDDAIKYYNWALELKEDP 39 (514)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCCH
T ss_pred chhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCccH
Confidence 4567778888888888888888888888888888763
No 91
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=82.17 E-value=1.8 Score=34.95 Aligned_cols=33 Identities=21% Similarity=0.171 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
-+..+|..++..|++++|+..+.+|++++|+..
T Consensus 47 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 79 (164)
T 3sz7_A 47 YLSNRAAAYSASGQHEKAAEDAELATVVDPKYS 79 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 356678888999999999999999999999854
No 92
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=82.06 E-value=3.2 Score=34.97 Aligned_cols=35 Identities=11% Similarity=-0.008 Sum_probs=32.9
Q ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 047551 4 NKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLN 38 (352)
Q Consensus 4 NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~ 38 (352)
.+++|+.+..+|..++..|++++|+.++.++++++
T Consensus 1 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~ 35 (258)
T 3uq3_A 1 GGSMADKEKAEGNKFYKARQFDEAIEHYNKAWELH 35 (258)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred CchHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh
Confidence 36789999999999999999999999999999999
No 93
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=81.24 E-value=2.5 Score=31.41 Aligned_cols=31 Identities=13% Similarity=-0.027 Sum_probs=18.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
+..+|..++..|++++|++.+.++++++|+.
T Consensus 49 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 79 (131)
T 2vyi_A 49 FCNRAAAYSKLGNYAGAVQDCERAICIDPAY 79 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhhchHHHHHHHHHHHhcCccC
Confidence 4455555566666666666666666666653
No 94
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=80.85 E-value=2.2 Score=34.48 Aligned_cols=33 Identities=9% Similarity=-0.015 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
-...+|..++..|++++|+..+++|++++|+..
T Consensus 67 a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 99 (150)
T 4ga2_A 67 AHRFLGLLYELEENTDKAVECYRRSVELNPTQK 99 (150)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCH
Confidence 355667778899999999999999999999854
No 95
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=80.70 E-value=2.7 Score=34.01 Aligned_cols=32 Identities=9% Similarity=0.034 Sum_probs=28.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+..+|..++..|++++|+..+.+|++++|+..
T Consensus 58 ~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 89 (148)
T 2vgx_A 58 FLGLGACRQAMGQYDLAIHSYSYGAVMDIXEP 89 (148)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCc
Confidence 44567778999999999999999999999865
No 96
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=80.66 E-value=2.7 Score=30.91 Aligned_cols=33 Identities=15% Similarity=0.207 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 9 LRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 9 ~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
.-+..+|..++..|++++|+.+++++++++|..
T Consensus 44 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 76 (125)
T 1na0_A 44 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN 76 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc
Confidence 345566677777777777777777777777654
No 97
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=80.54 E-value=2.2 Score=35.65 Aligned_cols=29 Identities=21% Similarity=0.134 Sum_probs=16.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 13 RIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 13 ~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
.+|..++..|++++|++++.+|++++|+.
T Consensus 127 ~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 155 (198)
T 2fbn_A 127 KLGVANMYFGFLEEAKENLYKAASLNPNN 155 (198)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHHCCCc
Confidence 34444555566666666666666666654
No 98
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=80.27 E-value=2 Score=34.72 Aligned_cols=32 Identities=9% Similarity=-0.027 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRL 37 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L 37 (352)
..|..+...+..+++.|++++|+..+.+|+++
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~ 40 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTR 40 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 56788999999999999999999999999999
No 99
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=80.03 E-value=2.3 Score=36.44 Aligned_cols=30 Identities=13% Similarity=0.041 Sum_probs=23.6
Q ss_pred CCHHHHHHHHHHHHhhCCCCC-HHHHHHHHH
Q 047551 22 GKKQRALKFIKIAQRLNDNLS-VHEVLAACE 51 (352)
Q Consensus 22 gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~~ 51 (352)
|++++|++.++||+.++|+.. ....|..+.
T Consensus 105 g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ 135 (158)
T 1zu2_A 105 HNFDLATQFFQQAVDEQPDNTHYLKSLEMTA 135 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 589999999999999999876 344444443
No 100
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=79.44 E-value=4.8 Score=29.41 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+.-+..+|..++..|++++|++++.++++++|...
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 43 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA 43 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcH
Confidence 55678899999999999999999999999999753
No 101
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=79.39 E-value=2.9 Score=32.02 Aligned_cols=33 Identities=15% Similarity=-0.005 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
-+..+|..++..|++++|+..+.+|++++|+..
T Consensus 45 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~ 77 (137)
T 3q49_B 45 YYTNRALCYLKMQQPEQALADCRRALELDGQSV 77 (137)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhH
Confidence 355667788999999999999999999999854
No 102
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=78.99 E-value=4.5 Score=34.32 Aligned_cols=29 Identities=17% Similarity=0.030 Sum_probs=26.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 14 IAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 14 iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+|..++..|++++|+..+.+|++++|+..
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 88 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNV 88 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCH
Confidence 78889999999999999999999999854
No 103
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=77.73 E-value=3.2 Score=33.80 Aligned_cols=32 Identities=6% Similarity=0.109 Sum_probs=27.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+..+|..++..|++++|++.++++++++|+..
T Consensus 110 ~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~ 141 (184)
T 3vtx_A 110 YYKLGLVYDSMGEHDKAIEAYEKTISIKPGFI 141 (184)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHhCCchhHHHHHHHHHHhcchhh
Confidence 45667788899999999999999999999854
No 104
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=77.44 E-value=2.5 Score=32.24 Aligned_cols=41 Identities=17% Similarity=0.053 Sum_probs=32.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHHH
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAACE 51 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~~ 51 (352)
.+-++..+++.|++++|+..+.+++..+|..+ ...+...|.
T Consensus 46 ~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~~~~i~~~I~ 87 (93)
T 3bee_A 46 LSLIANDHFISFRFQEAIDTWVLLLDSNDPNLDRVTIIESIN 87 (93)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Confidence 45567889999999999999999999999843 455555554
No 105
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=77.30 E-value=2.4 Score=32.36 Aligned_cols=42 Identities=7% Similarity=-0.017 Sum_probs=32.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHHHhc
Q 047551 12 IRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAACEKL 53 (352)
Q Consensus 12 ~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~~~l 53 (352)
..+|..++..|++++|+..+.+|++++|+.+ +..+...+...
T Consensus 65 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ai~~~ 107 (117)
T 3k9i_A 65 VFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQAILFY 107 (117)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 3456667899999999999999999999875 55555555433
No 106
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=76.31 E-value=3.7 Score=37.02 Aligned_cols=42 Identities=17% Similarity=0.124 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHH
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAA 49 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~ 49 (352)
+.-.+..|..++..|++++|+..+++|++++|+.. +...|..
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~ 159 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAE 159 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHH
Confidence 34467889999999999999999999999999865 4433433
No 107
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=75.97 E-value=5.5 Score=32.68 Aligned_cols=40 Identities=13% Similarity=0.000 Sum_probs=34.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 3 GNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 3 ~NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
.+.+.+.-+..+|..++..|++++|++.+.++++++|...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 42 (225)
T 2vq2_A 3 KANQVSNIKTQLAMEYMRGQDYRQATASIEDALKSDPKNE 42 (225)
T ss_dssp -CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccch
Confidence 4556777888999999999999999999999999999854
No 108
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=75.78 E-value=5 Score=35.51 Aligned_cols=36 Identities=14% Similarity=0.193 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+++.++.+|..++..|++++|+..+.++++++|+..
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~ 37 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNY 37 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccH
Confidence 456688888999999999999999999999998753
No 109
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=75.71 E-value=4.3 Score=31.80 Aligned_cols=30 Identities=13% Similarity=-0.105 Sum_probs=15.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDN 40 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~ 40 (352)
+..+|..++..|++++|+..+.+|++++|.
T Consensus 50 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 79 (166)
T 1a17_A 50 YGNRSLAYLRTECYGYALGDATRAIELDKK 79 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCcc
Confidence 344444555555555555555555555554
No 110
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=75.29 E-value=3 Score=30.12 Aligned_cols=33 Identities=12% Similarity=0.103 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
-+..+|..++..|++++|+..+.+|++++|...
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~ 40 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLDPEES 40 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCH
Confidence 356788899999999999999999999999854
No 111
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=75.02 E-value=1.9 Score=32.27 Aligned_cols=32 Identities=3% Similarity=-0.037 Sum_probs=27.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+..+|..+...|++++|+..+++|+++.|...
T Consensus 44 ~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~ 75 (100)
T 3ma5_A 44 YYHLGKLYERLDRTDDAIDTYAQGIEVAREEG 75 (100)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCC
Confidence 45567778899999999999999999988643
No 112
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=74.45 E-value=3.5 Score=35.89 Aligned_cols=37 Identities=19% Similarity=0.223 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+.+......|..++..|++++|+..+.++++++|..+
T Consensus 13 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~ 49 (261)
T 3qky_A 13 SSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHE 49 (261)
T ss_dssp SSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCST
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCc
Confidence 4566788999999999999999999999999999864
No 113
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=74.43 E-value=3.8 Score=34.84 Aligned_cols=32 Identities=19% Similarity=0.228 Sum_probs=28.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
...+|..++..|++++|+..+++|++++|+..
T Consensus 91 ~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~ 122 (208)
T 3urz_A 91 LEACAEMQVCRGQEKDALRMYEKILQLEADNL 122 (208)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH
Confidence 45667778999999999999999999999864
No 114
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=73.93 E-value=4.1 Score=36.09 Aligned_cols=28 Identities=14% Similarity=0.165 Sum_probs=14.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551 13 RIAEEAIASGKKQRALKFIKIAQRLNDN 40 (352)
Q Consensus 13 ~iA~~~l~~gd~~~A~kf~~kA~~L~P~ 40 (352)
.+|..++..|++++|+..+.++++++|+
T Consensus 277 ~la~~~~~~~~~~~A~~~~~~~~~~~~~ 304 (359)
T 3ieg_A 277 RICHCFSKDEKPVEAIRICSEVLQMEPD 304 (359)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 3445555555555555555555555554
No 115
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=73.73 E-value=4.4 Score=38.54 Aligned_cols=31 Identities=13% Similarity=0.051 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDN 40 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~ 40 (352)
-+..+|..+++.|++++|+..+.+|++++|+
T Consensus 275 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~ 305 (370)
T 1ihg_A 275 CVLNIGACKLKMSDWQGAVDSCLEALEIDPS 305 (370)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCch
Confidence 3444555555555555555555555555554
No 116
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=71.71 E-value=3.9 Score=33.16 Aligned_cols=35 Identities=11% Similarity=0.031 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+.-+..+|..++..|++++|+..+.+|++++|+..
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 78 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENA 78 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH
Confidence 34467788999999999999999999999999854
No 117
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=71.12 E-value=6.9 Score=35.13 Aligned_cols=35 Identities=14% Similarity=-0.041 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
|.....+|..++..|++++|+..+.+|++++|+..
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~ 38 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVA 38 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccH
Confidence 55678889999999999999999999999999754
No 118
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=71.01 E-value=2.1 Score=32.39 Aligned_cols=32 Identities=6% Similarity=-0.011 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
-+..+|..++..|++++|+..+++|++++|..
T Consensus 55 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 86 (115)
T 2kat_A 55 AWKWLGKTLQGQGDRAGARQAWESGLAAAQSR 86 (115)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcccc
Confidence 35567788899999999999999999999864
No 119
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=70.93 E-value=5.1 Score=34.29 Aligned_cols=35 Identities=9% Similarity=0.046 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+......|..++..|++++|+..++++++++|..+
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~ 38 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGP 38 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh
Confidence 34577888999999999999999999999999764
No 120
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=70.89 E-value=5.7 Score=32.25 Aligned_cols=37 Identities=19% Similarity=0.230 Sum_probs=29.6
Q ss_pred CCCC---HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047551 1 MDGN---KDEALRCIRIAEEAIASGKKQRALKFIKIAQRL 37 (352)
Q Consensus 1 Me~N---kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L 37 (352)
|-++ .+.|...+..|...-.+|++++|+.+|..|+.+
T Consensus 8 m~~~~~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 8 MSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 5544 577888888888888999999999988887764
No 121
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=70.89 E-value=5.6 Score=32.89 Aligned_cols=33 Identities=15% Similarity=0.242 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLN 38 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~ 38 (352)
|.|.+.+..|+.+++.||++++-..+.||+.+-
T Consensus 34 dgal~~l~~A~~ai~~~d~~~k~~~i~KA~~Ii 66 (131)
T 3iqc_A 34 EGILRFSSQAKRCIENEDIEKKIYYINRVTDIF 66 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999998753
No 122
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=70.85 E-value=7.3 Score=36.07 Aligned_cols=38 Identities=16% Similarity=0.003 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
.+.+..+..+|..++..|++++|+..+.+|++++|...
T Consensus 144 p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~ 181 (336)
T 1p5q_A 144 LEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYES 181 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccc
Confidence 35677888999999999999999999999999999973
No 123
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=70.77 E-value=4.8 Score=37.34 Aligned_cols=31 Identities=16% Similarity=0.100 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDN 40 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~ 40 (352)
-+..+|..++..|++++|+..+.+|++++|+
T Consensus 198 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~ 228 (336)
T 1p5q_A 198 SHLNLAMCHLKLQAFSAAIESCNKALELDSN 228 (336)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 3445555555555555555555555555554
No 124
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=70.01 E-value=9.8 Score=32.91 Aligned_cols=33 Identities=6% Similarity=-0.181 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
..+.+|..++..|++++|+..++++++++|+..
T Consensus 150 ~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~ 182 (261)
T 3qky_A 150 KQYEAARLYERRELYEAAAVTYEAVFDAYPDTP 182 (261)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCc
Confidence 347889999999999999999999999999865
No 125
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=69.89 E-value=6.1 Score=32.29 Aligned_cols=33 Identities=15% Similarity=0.130 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 9 LRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 9 ~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
.-...+|..++..|++++|+..+.++++++|+.
T Consensus 109 ~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 109 ELACELAVQYNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc
Confidence 345667888899999999999999999999975
No 126
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=69.47 E-value=7.6 Score=28.48 Aligned_cols=32 Identities=13% Similarity=0.233 Sum_probs=28.0
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+..+|..++..|++++|++++.++++++|...
T Consensus 4 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 35 (136)
T 2fo7_A 4 WYNLGNAYYKQGDYDEAIEYYQKALELDPRSA 35 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHcCCcch
Confidence 56778889999999999999999999998753
No 127
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=69.46 E-value=5.6 Score=34.00 Aligned_cols=31 Identities=19% Similarity=0.066 Sum_probs=24.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 12 IRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 12 ~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
..+|..++..|++++|+..+++|++++|+..
T Consensus 155 ~~la~~~~~~g~~~~A~~~~~~al~~~P~~~ 185 (217)
T 2pl2_A 155 SALAELYLSMGRLDEALAQYAKALEQAPKDL 185 (217)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh
Confidence 3455567788889999999999999988754
No 128
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=69.12 E-value=7.4 Score=32.14 Aligned_cols=34 Identities=12% Similarity=0.007 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCH
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSV 43 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~~ 43 (352)
-+..+|..++..|++++|+..+++|++++|+...
T Consensus 123 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 156 (213)
T 1hh8_A 123 VLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH 156 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHcCccccc
Confidence 3456677789999999999999999999998653
No 129
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=68.78 E-value=12 Score=31.35 Aligned_cols=39 Identities=13% Similarity=-0.003 Sum_probs=33.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 4 NKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 4 NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+.+.+.-+..+|..++..|++++|+..+++|+.++|...
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~ 173 (258)
T 3uq3_A 135 NPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDA 173 (258)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccH
Confidence 445556677889999999999999999999999999854
No 130
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=68.48 E-value=9.3 Score=32.54 Aligned_cols=26 Identities=19% Similarity=0.036 Sum_probs=13.3
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551 15 AEEAIASGKKQRALKFIKIAQRLNDN 40 (352)
Q Consensus 15 A~~~l~~gd~~~A~kf~~kA~~L~P~ 40 (352)
|..++..|++++|+..+++|++++|+
T Consensus 46 g~~~~~~g~~~~A~~~~~~al~~~P~ 71 (217)
T 2pl2_A 46 ARTQLKLGLVNPALENGKTLVARTPR 71 (217)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 34444555555555555555555554
No 131
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=68.36 E-value=4.4 Score=38.64 Aligned_cols=37 Identities=16% Similarity=0.165 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+.|..+..+|..++..|++++|++.+.+|++++|+..
T Consensus 23 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~ 59 (537)
T 3fp2_A 23 AYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEP 59 (537)
T ss_dssp HHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCc
Confidence 3456677777777777777777777777777777643
No 132
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=68.36 E-value=9.9 Score=31.35 Aligned_cols=32 Identities=16% Similarity=0.115 Sum_probs=25.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+..+|..++..|++++|++.+.+|++++|+..
T Consensus 40 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 71 (213)
T 1hh8_A 40 CFNIGCMYTILKNMTEAEKAFTRSINRDKHLA 71 (213)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCccch
Confidence 45677778888888888888888888888753
No 133
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=68.34 E-value=25 Score=31.57 Aligned_cols=22 Identities=14% Similarity=-0.029 Sum_probs=16.8
Q ss_pred HcCCHHHHHHHHHHHHhhCCCC
Q 047551 20 ASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 20 ~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
..|++++|+..++++++.+|+.
T Consensus 178 ~~~~~~eA~~~~~~~l~~~p~~ 199 (291)
T 3mkr_A 178 GGEKLQDAYYIFQEMADKCSPT 199 (291)
T ss_dssp CTTHHHHHHHHHHHHHHHSCCC
T ss_pred CchHHHHHHHHHHHHHHhCCCc
Confidence 4477888888888888888864
No 134
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=68.29 E-value=9.5 Score=32.08 Aligned_cols=33 Identities=12% Similarity=0.070 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDN 40 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~ 40 (352)
+.-++.+|..++..|++++|+.++.+|++++|.
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~ 39 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNN 39 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCC
Confidence 356788899999999999999999999999983
No 135
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=68.20 E-value=6.8 Score=33.03 Aligned_cols=33 Identities=27% Similarity=0.355 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLN 38 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~ 38 (352)
|.|.+.+..|+.+++.||++++-..+.||+.+-
T Consensus 31 dgal~~l~~A~~aie~~d~~~k~~~i~KA~~Ii 63 (145)
T 1vh6_A 31 NGCLKFIRLAAQAIENDDMERKNENLIKAQNII 63 (145)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999874
No 136
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=67.95 E-value=4.5 Score=31.88 Aligned_cols=42 Identities=7% Similarity=0.020 Sum_probs=32.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 1 MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 1 Me~NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
|......+.-+..+|..++..|++++|+..+.++++++|...
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 42 (186)
T 3as5_A 1 MGNDDIRQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDV 42 (186)
T ss_dssp ---CCHHHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCH
T ss_pred CCccchhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccCh
Confidence 333445666778889999999999999999999999998753
No 137
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=67.89 E-value=7.2 Score=35.80 Aligned_cols=39 Identities=13% Similarity=0.101 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 4 NKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 4 NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+...+..++.+|..++..|+++.|+.++++|++++|...
T Consensus 44 ~~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~ 82 (411)
T 4a1s_A 44 GSSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDL 82 (411)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCH
T ss_pred hhHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccCh
Confidence 456778888999999999999999999999999999854
No 138
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=67.11 E-value=11 Score=32.18 Aligned_cols=37 Identities=11% Similarity=-0.044 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+.+.-+..+|..++..|++++|+..+.+|+.++|...
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~ 77 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMP 77 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcH
Confidence 4566677889999999999999999999999999853
No 139
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=66.22 E-value=9 Score=28.05 Aligned_cols=32 Identities=13% Similarity=0.233 Sum_probs=27.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+..+|..++..|++++|++.+.+++.++|...
T Consensus 38 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~ 69 (136)
T 2fo7_A 38 WYNLGNAYYKQGDYDEAIEYYQKALELDPRSA 69 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHCCCch
Confidence 45567778899999999999999999999854
No 140
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=66.09 E-value=8.7 Score=37.35 Aligned_cols=34 Identities=12% Similarity=0.037 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
+.-+..+|..+++.|++++|+..+.+|++++|+.
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~ 350 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSAN 350 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc
Confidence 3345566666677777777777777777777763
No 141
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=65.83 E-value=9.6 Score=35.34 Aligned_cols=38 Identities=13% Similarity=0.192 Sum_probs=31.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 4 NKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 4 NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
+.+.+.-++.+|..++..|++++|+..+.++++++|..
T Consensus 22 ~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~ 59 (450)
T 2y4t_A 22 SMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDN 59 (450)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred cHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCcc
Confidence 44667778888888888999999999999999888875
No 142
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=65.46 E-value=9.1 Score=37.21 Aligned_cols=37 Identities=11% Similarity=-0.086 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+.|..+..++..+++.|+++.|+..+.+|++++|...
T Consensus 266 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~ 302 (457)
T 1kt0_A 266 EQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEY 302 (457)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccc
Confidence 5567788999999999999999999999999999873
No 143
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=64.95 E-value=9.1 Score=32.73 Aligned_cols=41 Identities=15% Similarity=0.136 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHH
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAAC 50 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~ 50 (352)
-.+..|..++..|++++|+..+.++++++|+.. +...+..+
T Consensus 5 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~ 46 (272)
T 3u4t_A 5 VEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVC 46 (272)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 367889999999999999999999999999865 44344333
No 144
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=64.62 E-value=9.8 Score=36.03 Aligned_cols=43 Identities=19% Similarity=0.073 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHH
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAAC 50 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~ 50 (352)
+.-+..+|..++..|++++|++.+++|++++|+.. +...|..+
T Consensus 307 ~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~ 350 (370)
T 1ihg_A 307 TKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKV 350 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 33456678888999999999999999999999764 44455444
No 145
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=64.58 E-value=9.4 Score=32.29 Aligned_cols=39 Identities=15% Similarity=0.219 Sum_probs=33.2
Q ss_pred CHHH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 4 NKDE-ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 4 NkdE-A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+.+. +.-+..+|..++..|++++|+..+++++.++|...
T Consensus 32 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~ 71 (252)
T 2ho1_A 32 GRDEARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSA 71 (252)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCH
T ss_pred chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChH
Confidence 3444 77788999999999999999999999999999753
No 146
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=64.13 E-value=7 Score=32.94 Aligned_cols=27 Identities=26% Similarity=0.139 Sum_probs=14.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551 14 IAEEAIASGKKQRALKFIKIAQRLNDN 40 (352)
Q Consensus 14 iA~~~l~~gd~~~A~kf~~kA~~L~P~ 40 (352)
+|..++..|++++|++.+.+|++++|+
T Consensus 48 ~~~~~~~~~~~~~A~~~~~~al~~~p~ 74 (228)
T 4i17_A 48 CGVCADNIKKYKEAADYFDIAIKKNYN 74 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHhhcHHHHHHHHHHHHHhCcc
Confidence 455555555555555555555555554
No 147
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=63.35 E-value=18 Score=30.59 Aligned_cols=35 Identities=14% Similarity=0.059 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+.-+..+|..++..|++++|+..+++|+.++|...
T Consensus 215 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 249 (275)
T 1xnf_A 215 SETNFYLGKYYLSLGDLDSATALFKLAVANNVHNF 249 (275)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTC
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCchhH
Confidence 45677889999999999999999999999999754
No 148
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=62.70 E-value=8.7 Score=29.39 Aligned_cols=37 Identities=22% Similarity=0.176 Sum_probs=28.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047551 1 MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRL 37 (352)
Q Consensus 1 Me~NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L 37 (352)
|+.---.|...+..|.+.-.+|+++.|+.++..|+.+
T Consensus 9 ~~~~~~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 9 MDPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp --CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4444456778888888889999999999988877754
No 149
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=61.98 E-value=12 Score=29.35 Aligned_cols=35 Identities=6% Similarity=0.067 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+.-+..+|..++..|++++|+..++++++++|...
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 76 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPDNV 76 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH
Confidence 34466778889999999999999999999999754
No 150
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=61.77 E-value=13 Score=28.15 Aligned_cols=33 Identities=27% Similarity=0.295 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047551 5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRL 37 (352)
Q Consensus 5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L 37 (352)
.+.|...+..|.+.-++|++++|+.++..|+.+
T Consensus 8 ~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 8 EDMARKYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 578888999999999999999999877766554
No 151
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=61.71 E-value=11 Score=32.19 Aligned_cols=32 Identities=16% Similarity=0.006 Sum_probs=28.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
.+.+|..++..|++++|+..+.++++++|+..
T Consensus 44 ~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~ 75 (225)
T 2yhc_A 44 QLDLIYAYYKNADLPLAQAAIDRFIRLNPTHP 75 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCC
Confidence 55668888999999999999999999999875
No 152
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=61.48 E-value=3.6 Score=38.31 Aligned_cols=32 Identities=16% Similarity=0.120 Sum_probs=27.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+..+|..++..|++++|+..+.+|++++|+..
T Consensus 233 ~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~ 264 (338)
T 2if4_A 233 HLNIAACLIKLKRYDEAIGHCNIVLTEEEKNP 264 (338)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 46788889999999999999999999999753
No 153
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=61.46 E-value=13 Score=28.21 Aligned_cols=33 Identities=21% Similarity=0.131 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047551 5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRL 37 (352)
Q Consensus 5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L 37 (352)
.+.|...+..|.+.-++|++++|+.++..|+.+
T Consensus 16 ~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 16 EEMARKYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 477888899999999999999999887776654
No 154
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=60.93 E-value=18 Score=30.70 Aligned_cols=32 Identities=9% Similarity=0.018 Sum_probs=26.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+..+|..++..|++++|++.+++|++++|...
T Consensus 77 ~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~ 108 (272)
T 3u4t_A 77 FEYYGKILMKKGQDSLAIQQYQAAVDRDTTRL 108 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhcCcccH
Confidence 45667778888899999999999999988765
No 155
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=60.18 E-value=6.6 Score=33.50 Aligned_cols=31 Identities=13% Similarity=0.018 Sum_probs=27.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 12 IRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 12 ~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
...+......|+++.|+..+++|++|+|...
T Consensus 106 ~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 106 YSRALALDGLGRGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 6777778889999999999999999999864
No 156
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=59.04 E-value=8 Score=33.82 Aligned_cols=33 Identities=15% Similarity=0.004 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
-+..+|..++..|++++|+..++++++++|+..
T Consensus 238 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 270 (330)
T 3hym_B 238 LLNNLGHVCRKLKKYAEALDYHRQALVLIPQNA 270 (330)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCS
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhhCccch
Confidence 355566666677777777777777777776643
No 157
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=58.21 E-value=13 Score=28.77 Aligned_cols=33 Identities=21% Similarity=0.172 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047551 5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRL 37 (352)
Q Consensus 5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L 37 (352)
-+.|...+..|.+.-.+|++++|+.++..|+.+
T Consensus 12 l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 12 STAAVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 367888888999999999999999987776654
No 158
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=57.47 E-value=14 Score=33.38 Aligned_cols=33 Identities=9% Similarity=0.091 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
-++.+|..++..|++++|++.+++|+.++|+..
T Consensus 67 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~ 99 (365)
T 4eqf_A 67 GAFEEGLKRLKEGDLPVTILFMEAAILQDPGDA 99 (365)
T ss_dssp THHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCH
Confidence 467778888888888888888888888888753
No 159
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=56.98 E-value=14 Score=38.61 Aligned_cols=37 Identities=14% Similarity=0.135 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+.|+-...+|..+.+.|++++|++.++||++++|+..
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~ 43 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFA 43 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 4455566777777788888888888888888888753
No 160
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=56.94 E-value=9.2 Score=37.24 Aligned_cols=30 Identities=17% Similarity=0.016 Sum_probs=19.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDN 40 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~ 40 (352)
+..+|..++..|++++|+..+++|++++|+
T Consensus 140 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 169 (474)
T 4abn_A 140 WNQLGEVYWKKGDVTSAHTCFSGALTHCKN 169 (474)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 344555566667777777777777777766
No 161
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=56.82 E-value=13 Score=34.40 Aligned_cols=41 Identities=17% Similarity=0.135 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHH
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAAC 50 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~ 50 (352)
-+..+|..++..|++++|+..+++|++++|+.. +...|..+
T Consensus 266 a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l 307 (338)
T 2if4_A 266 ALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRAL 307 (338)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHTTC---------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 356678888999999999999999999999754 44445444
No 162
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=56.78 E-value=13 Score=36.34 Aligned_cols=40 Identities=20% Similarity=0.226 Sum_probs=28.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHH
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAAC 50 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~ 50 (352)
...+|..++..|++++|++.+++|++++|+.. +...+..+
T Consensus 77 ~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~ 117 (477)
T 1wao_1 77 YYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 117 (477)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 44566777888889999999999999888764 44444433
No 163
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=56.69 E-value=19 Score=25.26 Aligned_cols=32 Identities=16% Similarity=0.072 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRL 37 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L 37 (352)
.+|+|..+-|..++.=.|..-|++-+.+|+++
T Consensus 18 ~~AqK~aK~AiSAL~feDv~tA~~~L~~AL~l 49 (53)
T 2rkl_A 18 EQIQKLAKYAISALNYEDLPTAKDELTKALDL 49 (53)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999876
No 164
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=56.50 E-value=16 Score=30.38 Aligned_cols=30 Identities=27% Similarity=0.310 Sum_probs=14.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDN 40 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~ 40 (352)
+..+|..++..|++++|++.+.++++++|.
T Consensus 60 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 89 (243)
T 2q7f_A 60 YINFANLLSSVNELERALAFYDKALELDSS 89 (243)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 334444444445555555555555555444
No 165
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=56.26 E-value=20 Score=30.16 Aligned_cols=34 Identities=18% Similarity=0.178 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
+.-...+|..++..|++++|++.+.++++++|..
T Consensus 141 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~ 174 (252)
T 2ho1_A 141 SRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQ 174 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCccc
Confidence 3344555666677777777777777777777764
No 166
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=56.26 E-value=17 Score=31.61 Aligned_cols=35 Identities=3% Similarity=-0.142 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+..++.+|..++..|++++|+.+++++++.+|+..
T Consensus 21 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~ 55 (327)
T 3cv0_A 21 HENPMEEGLSMLKLANLAEAALAFEAVCQAAPERE 55 (327)
T ss_dssp SSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCH
Confidence 34567788888888888888888888888888743
No 167
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=56.04 E-value=16 Score=32.61 Aligned_cols=32 Identities=9% Similarity=0.068 Sum_probs=25.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
++.+|..++..|++++|+..+.++++++|...
T Consensus 67 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~ 98 (368)
T 1fch_A 67 PFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHM 98 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCH
Confidence 56778888888888888888888888888753
No 168
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=55.78 E-value=19 Score=29.26 Aligned_cols=32 Identities=9% Similarity=0.038 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
-+..+|..++..|++++|+..+.++++++|..
T Consensus 115 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 146 (225)
T 2vq2_A 115 ANLNKGICSAKQGQFGLAEAYLKRSLAAQPQF 146 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 34556666777788888888888888887764
No 169
>1orj_A Flagellar protein FLIS; flagellin, flagellar export, chaperone, flagellum, four HELI; 2.25A {Aquifex aeolicus} SCOP: a.24.19.1 PDB: 1ory_A
Probab=55.42 E-value=9.2 Score=31.61 Aligned_cols=32 Identities=19% Similarity=0.323 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHcCCH-HHH---HHHHHHHHhh
Q 047551 6 DEALRCIRIAEEAIASGKK-QRA---LKFIKIAQRL 37 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~-~~A---~kf~~kA~~L 37 (352)
|.|.+.+..|+.+++.||+ +++ -..+.||+.+
T Consensus 27 dgai~~l~~A~~ai~~~d~~~~k~~~~~~i~KA~~I 62 (130)
T 1orj_A 27 DKAIECLERAIEIYDQVNELEKRKEFVENIDRVYDI 62 (130)
T ss_dssp HHHHHHHHHHHHTGGGTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999 888 6668888765
No 170
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=54.93 E-value=16 Score=27.47 Aligned_cols=33 Identities=6% Similarity=-0.033 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047551 5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRL 37 (352)
Q Consensus 5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L 37 (352)
.+.|...+..|...-.+|++++|+.++..|+.+
T Consensus 10 l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 10 LTKGIELVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 578888888888888999999999988877664
No 171
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=54.83 E-value=18 Score=29.93 Aligned_cols=34 Identities=12% Similarity=-0.003 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
|.-++.+|..++..|++++|+.++.++++++|..
T Consensus 23 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~~ 56 (243)
T 2q7f_A 23 SMTGGQQMGRGSEFGDYEKAAEAFTKAIEENKED 56 (243)
T ss_dssp -------------------CCTTHHHHHTTCTTC
T ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHhCccc
Confidence 3445566666666666666666666666666653
No 172
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=54.82 E-value=9.8 Score=34.82 Aligned_cols=30 Identities=13% Similarity=0.107 Sum_probs=21.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 13 RIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 13 ~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
++|..+++.|++++|++.+.++++++|+..
T Consensus 4 ~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~ 33 (388)
T 1w3b_A 4 ELAHREYQAGDFEAAERHCMQLWRQEPDNT 33 (388)
T ss_dssp THHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred hHHHHHHHCCCHHHHHHHHHHHHHhCCCCH
Confidence 456667777777777777777777777653
No 173
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=54.72 E-value=16 Score=32.66 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
+.-.+.+|..++..|++++|+..+.++++++|+.
T Consensus 219 ~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 219 AALATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 3346778888999999999999999999999986
No 174
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=53.91 E-value=17 Score=31.36 Aligned_cols=35 Identities=17% Similarity=0.165 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+..++..|..++..|++++|+.++++|++++|...
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~ 39 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDL 39 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccH
Confidence 45667789999999999999999999999999854
No 175
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=53.58 E-value=24 Score=30.69 Aligned_cols=40 Identities=18% Similarity=0.211 Sum_probs=31.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHH
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAAC 50 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~ 50 (352)
+..+|..++..|++++|++++++|++++|+.. +...|..+
T Consensus 273 ~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 313 (330)
T 3hym_B 273 YSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHC 313 (330)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHHHHH
Confidence 45567778899999999999999999999865 44444443
No 176
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=53.15 E-value=16 Score=35.42 Aligned_cols=36 Identities=14% Similarity=-0.056 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
.+.-+..+|..++..|++++|+..+++|++++|+..
T Consensus 257 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 292 (474)
T 4abn_A 257 NPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWP 292 (474)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 344566778888889999999999999999999865
No 177
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=53.09 E-value=14 Score=27.96 Aligned_cols=37 Identities=5% Similarity=-0.020 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
..|.-+..+|..++..|++++|++.+.+|+.+.+...
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~ 43 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG 43 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhC
Confidence 4566678889999999999999999999999987643
No 178
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=52.78 E-value=20 Score=31.92 Aligned_cols=32 Identities=16% Similarity=0.014 Sum_probs=28.0
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
...+|..++..|++++|++.+.+|++++|+..
T Consensus 41 ~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~ 72 (281)
T 2c2l_A 41 YTNRALCYLKMQQPEQALADCRRALELDGQSV 72 (281)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCH
Confidence 45577788999999999999999999999854
No 179
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=52.53 E-value=16 Score=27.63 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 9 LRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 9 ~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
.-+..+|..++..|++++|++++++|+++.+...
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~ 83 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK 83 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC
Confidence 3456678888999999999999999999987653
No 180
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.24 E-value=20 Score=29.12 Aligned_cols=31 Identities=16% Similarity=0.169 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQR 36 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~ 36 (352)
++|.++|..|.+.-+.|+.+.|+.+|.+.+.
T Consensus 20 ~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~ 50 (116)
T 2dl1_A 20 KKAFLFVNKGLNTDELGQKEEAKNYYKQGIG 50 (116)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhcCCHHHHHHHHHHHHH
Confidence 6899999999999999999999888777643
No 181
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=50.17 E-value=18 Score=35.49 Aligned_cols=32 Identities=13% Similarity=-0.117 Sum_probs=27.2
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+..+|..+++.|++++|+..+++|++++|+..
T Consensus 43 ~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 74 (477)
T 1wao_1 43 YGNRSLAYLRTECYGYALGDATRAIELDKKYI 74 (477)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCH
Confidence 44567778899999999999999999999853
No 182
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=49.37 E-value=7 Score=33.36 Aligned_cols=34 Identities=12% Similarity=0.011 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHcCC----------HHHHHHHHHHHHhhCCCCC
Q 047551 9 LRCIRIAEEAIASGK----------KQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 9 ~rc~~iA~~~l~~gd----------~~~A~kf~~kA~~L~P~~~ 42 (352)
+-++.++...+..++ +++|+..+++|++|+|+..
T Consensus 37 ea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~ 80 (158)
T 1zu2_A 37 DNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKD 80 (158)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcH
Confidence 334445555555554 5699999999999999954
No 183
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=49.20 E-value=44 Score=24.12 Aligned_cols=47 Identities=21% Similarity=0.463 Sum_probs=34.4
Q ss_pred CCCCCCCHHHHHHHHH-Hhc-CCCchhhc---CcCCCCCHHHHHHHHHHhhh
Q 047551 87 SGERSYTEEHVELIRQ-IKR-NKDYYAIL---GVERSCSVEEIRKAYRKLSL 133 (352)
Q Consensus 87 ~~~~~~t~~~~~~~~~-~~~-~~d~Y~iL---gv~~~a~~~eIkkaYrkla~ 133 (352)
.....||+|+.+.+.. +.+ +..|=.|| -.-++-|.-+||..||.|.+
T Consensus 6 ~~r~~WT~EE~~~L~~gV~k~G~~W~~I~~~y~f~~~RT~VdLKdk~r~L~k 57 (62)
T 1x58_A 6 SGRKDFTKEEVNYLFHGVKTMGNHWNSILWSFPFQKGRRAVDLAHKYHRLIS 57 (62)
T ss_dssp CCSSSCCHHHHHHHHHHHHHHCSCHHHHHHHSCCCTTCCHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHHhHhHHHHHHhCCCccCcccchHHHHHHHHHh
Confidence 3456899888755542 222 45899999 45667799999999999876
No 184
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=48.97 E-value=16 Score=35.94 Aligned_cols=29 Identities=10% Similarity=0.196 Sum_probs=15.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551 12 IRIAEEAIASGKKQRALKFIKIAQRLNDN 40 (352)
Q Consensus 12 ~~iA~~~l~~gd~~~A~kf~~kA~~L~P~ 40 (352)
..+|..++..|++++|+..+++|++++|+
T Consensus 27 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 55 (568)
T 2vsy_A 27 LMLADAELGMGDTTAGEMAVQRGLALHPG 55 (568)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTTSTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 33444455555555555555555555554
No 185
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=48.66 E-value=22 Score=32.04 Aligned_cols=32 Identities=13% Similarity=0.031 Sum_probs=27.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+..+|..++..|++++|+..+.+|+.++|+..
T Consensus 102 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 133 (365)
T 4eqf_A 102 WQFLGITQAENENEQAAIVALQRCLELQPNNL 133 (365)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCH
Confidence 45567778899999999999999999999854
No 186
>4fm3_A Uncharacterized hypothetical protein; PF14346 family protein, DUF4398, structural genomics, joint for structural genomics, JCSG; HET: PG4; 2.47A {Pseudomonas aeruginosa}
Probab=48.65 E-value=24 Score=27.80 Aligned_cols=29 Identities=17% Similarity=0.059 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 047551 7 EALRCIRIAEEAIASGKKQRALKFIKIAQ 35 (352)
Q Consensus 7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~ 35 (352)
.|+.-+.-|+.+|..++|..|++++++|.
T Consensus 33 ~A~dKl~~A~~Am~~~~y~~Ar~lAEqAe 61 (98)
T 4fm3_A 33 LAQDKYAAAQIAMTAESYKKARLLAEQAE 61 (98)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 56778899999999999999999999985
No 187
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=47.66 E-value=21 Score=32.05 Aligned_cols=35 Identities=17% Similarity=0.165 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+..++..|..++..|++++|+.++++|+++.|...
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~ 43 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDL 43 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccH
Confidence 45577889999999999999999999999999854
No 188
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=46.66 E-value=24 Score=31.39 Aligned_cols=32 Identities=16% Similarity=0.037 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
-...+|..++..|++++|+..+.+|++++|+.
T Consensus 219 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 250 (368)
T 1fch_A 219 VQCGLGVLFNLSGEYDKAVDCFTAALSVRPND 250 (368)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC
Confidence 34555666666666666666666666666654
No 189
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=46.26 E-value=15 Score=28.56 Aligned_cols=39 Identities=23% Similarity=0.284 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHhhCCCCCHHHHHHHHHh
Q 047551 6 DEALRCIRIAEEAIAS---GKKQRALKFIKIAQRLNDNLSVHEVLAACEK 52 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~---gd~~~A~kf~~kA~~L~P~~~~~~ll~~~~~ 52 (352)
+.|.+||..|.++-.. |+.+.|+.+|.|.+ .+|+..+.+
T Consensus 14 ~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi--------~eL~~Gi~V 55 (89)
T 3eab_A 14 KQAFEYISIALRIDEDEKAGQKEQAVEWYKKGI--------EELEKGIAV 55 (89)
T ss_dssp HHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHH--------HHHHHHHHS
T ss_pred HHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHH--------HHHHhhcCC
Confidence 6788999999988888 99999999988864 456666554
No 190
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=46.25 E-value=21 Score=37.45 Aligned_cols=32 Identities=19% Similarity=0.210 Sum_probs=24.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
...+|..+...|++++|+..+++|++++|+..
T Consensus 114 ~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~ 145 (723)
T 4gyw_A 114 HSNLASIHKDSGNIPEAIASYRTALKLKPDFP 145 (723)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh
Confidence 44556667788888888888888888888754
No 191
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=45.95 E-value=26 Score=30.30 Aligned_cols=30 Identities=13% Similarity=0.003 Sum_probs=16.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDN 40 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~ 40 (352)
...+|..++..|++++|++.+.++++++|+
T Consensus 175 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 204 (327)
T 3cv0_A 175 HASLGVLYNLSNNYDSAAANLRRAVELRPD 204 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 344455555555555555555555555554
No 192
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=45.44 E-value=24 Score=34.60 Aligned_cols=29 Identities=14% Similarity=0.080 Sum_probs=17.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 13 RIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 13 ~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
.+|..++..|++++|+..+++|++++|+.
T Consensus 96 ~la~~~~~~g~~~~A~~~~~~al~~~p~~ 124 (568)
T 2vsy_A 96 WLGHALEDAGQAEAAAAAYTRAHQLLPEE 124 (568)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 34455556666666666666666666654
No 193
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=44.94 E-value=17 Score=33.22 Aligned_cols=31 Identities=19% Similarity=0.268 Sum_probs=21.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
+..++..++..|++++|+..+++|++++|+.
T Consensus 70 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 100 (388)
T 1w3b_A 70 YSNLGNVYKERGQLQEAIEHYRHALRLKPDF 100 (388)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHcCcch
Confidence 4455666667777777777777777777764
No 194
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=44.47 E-value=24 Score=33.43 Aligned_cols=34 Identities=18% Similarity=0.272 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 9 LRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 9 ~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
.-+..+|..++..|++++|++.+.+++.++|+..
T Consensus 60 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 93 (537)
T 3fp2_A 60 VFYSNISACYISTGDLEKVIEFTTKALEIKPDHS 93 (537)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchH
Confidence 3466778889999999999999999999999854
No 195
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=44.21 E-value=51 Score=28.23 Aligned_cols=31 Identities=13% Similarity=0.189 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDN 40 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~ 40 (352)
-+|.-|+=-++.|++.+|++.+.+|+.+.|-
T Consensus 96 iwi~~AqFEiRqgnl~kARkILg~AiG~~~k 126 (161)
T 4h7y_A 96 VHISFAQFELSQGNVKKSKQLLQKAVERGAV 126 (161)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHhccCCC
Confidence 3455566668999999999999999999997
No 196
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=42.42 E-value=37 Score=30.09 Aligned_cols=32 Identities=13% Similarity=0.017 Sum_probs=26.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
...+|..++..|++++|+..+++|+++.|...
T Consensus 161 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 192 (292)
T 1qqe_A 161 FIKCADLKALDGQYIEASDIYSKLIKSSMGNR 192 (292)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC
Confidence 34556777888999999999999999998754
No 197
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=42.20 E-value=22 Score=31.68 Aligned_cols=34 Identities=9% Similarity=0.029 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
|.-+..++..+...|++++|+..+.+|+.++|..
T Consensus 77 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~ 110 (292)
T 1qqe_A 77 GNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHR 110 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 4455566777788899999999999999999865
No 198
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=41.65 E-value=40 Score=34.49 Aligned_cols=32 Identities=6% Similarity=-0.105 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
-++.+|..++..|++++|+..+++|++++|+.
T Consensus 435 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~ 466 (681)
T 2pzi_A 435 LPLMEVRALLDLGDVAKATRKLDDLAERVGWR 466 (681)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhccCcch
Confidence 34455555555555555555555555555553
No 199
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=41.49 E-value=24 Score=32.53 Aligned_cols=31 Identities=6% Similarity=-0.046 Sum_probs=28.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
-++-|+++++.|++++|++.+.+++.++|..
T Consensus 7 ~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~ 37 (434)
T 4b4t_Q 7 KLEEARRLVNEKQYNEAEQVYLSLLDKDSSQ 37 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSCCCS
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCccc
Confidence 5778999999999999999999999999975
No 200
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=39.88 E-value=66 Score=25.12 Aligned_cols=46 Identities=24% Similarity=0.354 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCHHH----HHHHHH
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHE----VLAACE 51 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~~~~----ll~~~~ 51 (352)
-.|.-.|.-|+..++.+++..|+-|++|+..+-.+..++. .|..|.
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten~~i~ki~~fyl~ec~ 100 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLSDNEEIKKIASFYLEECR 100 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHccccCHHHHHHHHHHHHHHH
Confidence 3566678888999999999999999999999988876554 445554
No 201
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=39.31 E-value=53 Score=30.56 Aligned_cols=35 Identities=17% Similarity=-0.061 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDN 40 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~ 40 (352)
+.+.-+..+|..++..|++++|++.+.++++++|.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~~~ 269 (514)
T 2gw1_A 235 KLAISLEHTGIFKFLKNDPLGAHEDIKKAIELFPR 269 (514)
T ss_dssp HHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc
Confidence 33445566677788999999999999999999999
No 202
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=39.07 E-value=40 Score=30.60 Aligned_cols=35 Identities=23% Similarity=0.377 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCHH
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVH 44 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~~~ 44 (352)
-+..+|..+...|++++|+.++.+|+++.+.....
T Consensus 345 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 379 (411)
T 4a1s_A 345 ACWSLGNAHSAIGGHERALKYAEQHLQLAXXXXXX 379 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHhhcccc
Confidence 34445666667777777777777777777765433
No 203
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=38.84 E-value=36 Score=32.97 Aligned_cols=22 Identities=18% Similarity=0.096 Sum_probs=11.2
Q ss_pred HcCCHHHHHHHHHHHHhhCCCC
Q 047551 20 ASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 20 ~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
-.|+++.|+..+.+|++|+|..
T Consensus 322 ~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 322 MKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp HTTCHHHHHHHHHHHHHHSCSH
T ss_pred HCCCHHHHHHHHHHHHhcCCCc
Confidence 4455555555555555555543
No 204
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=38.46 E-value=51 Score=31.28 Aligned_cols=38 Identities=16% Similarity=-0.004 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
-+-+.-...++..+...|++++|+..+.+|++++|+..
T Consensus 94 p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~ 131 (382)
T 2h6f_A 94 DKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANY 131 (382)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCH
T ss_pred hhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCH
Confidence 34444556667777888889999999999999998854
No 205
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=37.49 E-value=47 Score=28.49 Aligned_cols=31 Identities=10% Similarity=0.147 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQR 36 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~ 36 (352)
..+.-+..++..++..|++++|++++.+|.+
T Consensus 4 ~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~ 34 (273)
T 1ouv_A 4 QDPKELVGLGAKSYKEKDFTQAKKYFEKACD 34 (273)
T ss_dssp -CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 4455578889999999999999999999988
No 206
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=36.95 E-value=48 Score=34.31 Aligned_cols=46 Identities=20% Similarity=0.206 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHH-Hhc
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAAC-EKL 53 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~-~~l 53 (352)
+.+.++.|++++..|+|.=|..+++.++..+|+.. ++.|++.+ +.+
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l 496 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQL 496 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999876 66666543 444
No 207
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=35.97 E-value=49 Score=28.26 Aligned_cols=34 Identities=12% Similarity=0.001 Sum_probs=30.0
Q ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047551 4 NKDEALRCIRIAEEAIASGKKQRALKFIKIAQRL 37 (352)
Q Consensus 4 NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L 37 (352)
+.+.+.-+..+|..++..|++++|+.++.+|+++
T Consensus 23 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 56 (311)
T 3nf1_A 23 IPARLRTLHNLVIQYASQGRYEVAVPLCKQALED 56 (311)
T ss_dssp SCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3456677888999999999999999999999998
No 208
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=35.83 E-value=36 Score=28.54 Aligned_cols=35 Identities=20% Similarity=0.042 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 047551 5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLND 39 (352)
Q Consensus 5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P 39 (352)
.+.+.-+..+|..++..|++++|+.++.+++++.|
T Consensus 166 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~ 200 (283)
T 3edt_B 166 PNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAH 200 (283)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 34455677788889999999999999999999843
No 209
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=35.37 E-value=52 Score=29.37 Aligned_cols=34 Identities=9% Similarity=-0.013 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551 7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLNDN 40 (352)
Q Consensus 7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~ 40 (352)
.+.-+..+|.-++..|++++|+..+++|++++|.
T Consensus 154 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 187 (307)
T 2ifu_A 154 AAELIGKASRLLVRQQKFDEAAASLQKEKSMYKE 187 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 3444555566666666666666666666666553
No 210
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=34.96 E-value=29 Score=32.75 Aligned_cols=23 Identities=13% Similarity=0.088 Sum_probs=20.2
Q ss_pred cCCHHHHHHHHHHHHhhCCCCCH
Q 047551 21 SGKKQRALKFIKIAQRLNDNLSV 43 (352)
Q Consensus 21 ~gd~~~A~kf~~kA~~L~P~~~~ 43 (352)
-||.++|.+.++||++|.|+-.+
T Consensus 217 gGd~ekA~~~ferAL~LnP~~~i 239 (301)
T 3u64_A 217 GGGMEKAHTAFEHLTRYCSAHDP 239 (301)
T ss_dssp TCCHHHHHHHHHHHHHHCCTTCS
T ss_pred CCCHHHHHHHHHHHHHhCCCCCc
Confidence 49999999999999999997533
No 211
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=34.88 E-value=37 Score=31.65 Aligned_cols=31 Identities=6% Similarity=-0.099 Sum_probs=27.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 12 IRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 12 ~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
..+|..+...|++++|+..++||+.++|+..
T Consensus 338 ~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~ 368 (472)
T 4g1t_A 338 SILASLHALADQYEEAEYYFQKEFSKELTPV 368 (472)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHSCCCHH
T ss_pred hhHHHHHHHhccHHHHHHHHHHHHhcCCCCh
Confidence 3567778899999999999999999999865
No 212
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=34.75 E-value=45 Score=31.69 Aligned_cols=32 Identities=6% Similarity=-0.142 Sum_probs=24.7
Q ss_pred HHHHHHHHHHcCC-HHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGK-KQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd-~~~A~kf~~kA~~L~P~~~ 42 (352)
+..++..++..|+ +++|+.++.+|++++|...
T Consensus 134 ~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~ 166 (382)
T 2h6f_A 134 WHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNY 166 (382)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCH
Confidence 3445566677785 9999999999999999854
No 213
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=34.75 E-value=45 Score=27.87 Aligned_cols=33 Identities=18% Similarity=0.138 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047551 5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRL 37 (352)
Q Consensus 5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L 37 (352)
.+.+.-+..+|..++..|++++|+..+++|+++
T Consensus 124 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 124 PDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 344555667788888999999999999999999
No 214
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=34.70 E-value=33 Score=33.23 Aligned_cols=40 Identities=18% Similarity=0.159 Sum_probs=30.0
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCCHHHHHHHHHhc
Q 047551 14 IAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKL 53 (352)
Q Consensus 14 iA~~~l~~gd~~~A~kf~~kA~~L~P~~~~~~ll~~~~~l 53 (352)
+|..++..|+++.|+..+++|+.|+|+..+..++..+..+
T Consensus 283 lal~~l~~gd~d~A~~~l~rAl~Ln~s~~a~~llG~~~~~ 322 (372)
T 3ly7_A 283 KAVSALVKGKTDESYQAINTGIDLEMSWLNYVLLGKVYEM 322 (372)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 3445566899999999999999999874444566665554
No 215
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=34.61 E-value=34 Score=30.65 Aligned_cols=32 Identities=13% Similarity=0.050 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 047551 7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLND 39 (352)
Q Consensus 7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P 39 (352)
.|.-+..+|..+.. |++++|+..+++|+.++|
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~ 146 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFE 146 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHH
Confidence 45556788888877 999999999999999874
No 216
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=33.88 E-value=55 Score=26.13 Aligned_cols=32 Identities=13% Similarity=0.002 Sum_probs=26.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
...+|..++..|++++|++.+.+|+++.....
T Consensus 150 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 181 (203)
T 3gw4_A 150 FRGLGDLAQQEKNLLEAQQHWLRARDIFAELE 181 (203)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcC
Confidence 35667777889999999999999999887654
No 217
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=33.77 E-value=59 Score=29.05 Aligned_cols=31 Identities=13% Similarity=0.060 Sum_probs=27.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 12 IRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 12 ~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
..++.-+++.|++++|++.++++++++|+..
T Consensus 134 ~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~ 164 (291)
T 3mkr_A 134 AMTVQILLKLDRLDLARKELKKMQDQDEDAT 164 (291)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhhCcCcH
Confidence 4567788899999999999999999999854
No 218
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=33.55 E-value=56 Score=24.53 Aligned_cols=35 Identities=11% Similarity=0.113 Sum_probs=28.2
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 047551 2 DGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQR 36 (352)
Q Consensus 2 e~NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~ 36 (352)
-++-.|-..-+++|+++-..|||+.|+.+++-++.
T Consensus 6 ~~~~~~i~e~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 6 TMSLQMIVENVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp SSSSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 33445555678899999999999999999998865
No 219
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=33.32 E-value=29 Score=31.00 Aligned_cols=20 Identities=20% Similarity=0.285 Sum_probs=12.4
Q ss_pred cCCHHHHHHHHHHHHhhCCC
Q 047551 21 SGKKQRALKFIKIAQRLNDN 40 (352)
Q Consensus 21 ~gd~~~A~kf~~kA~~L~P~ 40 (352)
.|+++.|++.+++|++++|+
T Consensus 182 ~~~~~~A~~~~~~al~~~p~ 201 (308)
T 2ond_A 182 SKDKSVAFKIFELGLKKYGD 201 (308)
T ss_dssp SCCHHHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHHhCCC
Confidence 46666666666666666665
No 220
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=33.24 E-value=94 Score=25.96 Aligned_cols=42 Identities=7% Similarity=-0.068 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCCHHHHHHH
Q 047551 8 ALRCIRIAEEAIA----SGKKQRALKFIKIAQRLNDNLSVHEVLAA 49 (352)
Q Consensus 8 A~rc~~iA~~~l~----~gd~~~A~kf~~kA~~L~P~~~~~~ll~~ 49 (352)
+.-+..++.-++. .+|+++|++++++|.++..+..+...|..
T Consensus 125 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~a~~~Lg~ 170 (212)
T 3rjv_A 125 VDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSLSRTGYAEYWAGM 170 (212)
T ss_dssp HHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHTSCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 3445666666666 67788888888888777333334333333
No 221
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=33.06 E-value=46 Score=30.98 Aligned_cols=31 Identities=16% Similarity=0.082 Sum_probs=26.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 12 IRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 12 ~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
..+|..+...|++++|+..+.+|++++|+..
T Consensus 251 ~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 281 (472)
T 4g1t_A 251 RSAAKFYRRKDEPDKAIELLKKALEYIPNNA 281 (472)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHcCchHHHHHHHHHHHHhCCChH
Confidence 3456778899999999999999999999854
No 222
>3dza_A Uncharacterized putative membrane protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=32.82 E-value=47 Score=29.25 Aligned_cols=36 Identities=28% Similarity=0.234 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
.|.+=|..|+-+|-.|+.+.|++++..|..+.-...
T Consensus 34 ~A~~DI~~AR~aL~~G~~~~Ak~lL~~A~~~L~~a~ 69 (191)
T 3dza_A 34 NAMRDIQFARLALFHGQPDSAKKLTDDAAALLAADD 69 (191)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTSCH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHh
Confidence 578889999999999999999999999999877644
No 223
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=32.80 E-value=62 Score=25.80 Aligned_cols=31 Identities=13% Similarity=0.044 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047551 7 EALRCIRIAEEAIASGKKQRALKFIKIAQRL 37 (352)
Q Consensus 7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L 37 (352)
.+.-+..+|..++..|++++|++.+.+|+++
T Consensus 65 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 65 EHRALHQVGMVERMAGNWDAARRCFLEEREL 95 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3445666777888999999999999999999
No 224
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=32.61 E-value=38 Score=29.83 Aligned_cols=33 Identities=9% Similarity=0.022 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 9 LRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 9 ~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
.-+..+|..++..|++++|+.++++|+.+.+..
T Consensus 197 ~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~ 229 (293)
T 3u3w_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCRI 229 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc
Confidence 345677778889999999999999999997654
No 225
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=32.52 E-value=78 Score=27.73 Aligned_cols=37 Identities=0% Similarity=-0.137 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+.....+..+..++..|++++|++++.+++...|...
T Consensus 73 ~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~ 109 (293)
T 2qfc_A 73 ERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHP 109 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCH
T ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCCh
Confidence 3445667889999999999999999999999998754
No 226
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=32.25 E-value=43 Score=28.64 Aligned_cols=37 Identities=16% Similarity=0.063 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551 4 NKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDN 40 (352)
Q Consensus 4 NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~ 40 (352)
+...+.-...+|..++..|++++|++++++|+.+.|.
T Consensus 191 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 191 DPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 3444555667788889999999999999999987543
No 227
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=32.23 E-value=54 Score=31.50 Aligned_cols=37 Identities=19% Similarity=0.036 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
..+.-+..++..+.+.|++++|++.++++++++|...
T Consensus 198 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~ 234 (597)
T 2xpi_A 198 LEASMCYLRGQVYTNLSNFDRAKECYKEALMVDAKCY 234 (597)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCchhh
Confidence 4566788889999999999999999999999999854
No 228
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=31.93 E-value=42 Score=31.63 Aligned_cols=40 Identities=8% Similarity=0.019 Sum_probs=32.6
Q ss_pred CCCHHHHHHHHHHHHHHH----------------H-cCCHHHHHHHHHHHHhhCCCC
Q 047551 2 DGNKDEALRCIRIAEEAI----------------A-SGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 2 e~NkdEA~rc~~iA~~~l----------------~-~gd~~~A~kf~~kA~~L~P~~ 41 (352)
-++.+.|+++++.|.+.= . .||++.|++.+++|++++|..
T Consensus 217 gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 217 GGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp TCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred CCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 378889988888876632 2 478999999999999999983
No 229
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=31.61 E-value=43 Score=30.61 Aligned_cols=29 Identities=17% Similarity=0.224 Sum_probs=15.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 047551 11 CIRIAEEAIASGKKQRALKFIKIAQRLND 39 (352)
Q Consensus 11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P 39 (352)
+..+|..++..|++++|+.++++|+.+.+
T Consensus 264 ~~~la~~~~~~g~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 264 LFGLSWTLCKAGQTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 33444445555566666666666665544
No 230
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=31.44 E-value=71 Score=25.29 Aligned_cols=34 Identities=18% Similarity=0.034 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 047551 5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLN 38 (352)
Q Consensus 5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~ 38 (352)
-.+|.-+.--|-.+.+.|||++|...+.+|..-.
T Consensus 17 aG~ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~~l 50 (105)
T 2e2a_A 17 AGDARSKLLEALKAAENGDFAKADSLVVEAGSCI 50 (105)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 3567777777888899999999999999987643
No 231
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=31.08 E-value=73 Score=25.13 Aligned_cols=34 Identities=15% Similarity=0.058 Sum_probs=28.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047551 4 NKDEALRCIRIAEEAIASGKKQRALKFIKIAQRL 37 (352)
Q Consensus 4 NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L 37 (352)
|-.+|.-+.--|-.+.+.|||++|...+.+|..-
T Consensus 14 ~aG~Ars~~~eAl~~Ak~g~fe~A~~~l~eA~~~ 47 (103)
T 1wcr_A 14 NSGQARSLAYAALKQAKQGDFAAAKAMMDQSRMA 47 (103)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 3457777777788889999999999999998764
No 232
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=30.26 E-value=76 Score=25.32 Aligned_cols=35 Identities=20% Similarity=0.020 Sum_probs=28.1
Q ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 047551 4 NKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLN 38 (352)
Q Consensus 4 NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~ 38 (352)
|-.+|.-+.--|-.+.+.|||++|.+.+.+|..-.
T Consensus 18 ~aG~Ars~~~eAl~~Ak~gdfe~A~~~l~eA~~~l 52 (109)
T 3k1s_A 18 NSGNARSFAMEALQFAKQGKMAEADEAMVKAKEAI 52 (109)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 34577777777888889999999999999986543
No 233
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=29.56 E-value=72 Score=25.94 Aligned_cols=33 Identities=15% Similarity=-0.033 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLN 38 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~ 38 (352)
.+|.-|.--|-.+.+.|||++|.+.+.+|..-.
T Consensus 35 G~ARS~~~eAl~~Ak~gdfe~A~~~l~eA~e~l 67 (120)
T 3l8r_A 35 GNARSIVHEAFDAMREKNYILAEQKLQEANDEL 67 (120)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 466667777778889999999999999986543
No 234
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=29.06 E-value=84 Score=30.12 Aligned_cols=33 Identities=9% Similarity=-0.016 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
-+..++..+...|++++|++.++++++++|+..
T Consensus 518 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~ 550 (597)
T 2xpi_A 518 TWANLGHAYRKLKMYDAAIDALNQGLLLSTNDA 550 (597)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh
Confidence 344556667889999999999999999999754
No 235
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=28.97 E-value=50 Score=30.11 Aligned_cols=36 Identities=8% Similarity=0.083 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
.|.-+..+|..+...|+++.|+.++.+|+.+++...
T Consensus 142 ~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~ 177 (383)
T 3ulq_A 142 KAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHE 177 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCc
Confidence 455566777788888899999999999998887654
No 236
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=28.55 E-value=50 Score=29.05 Aligned_cols=31 Identities=10% Similarity=0.015 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDN 40 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~ 40 (352)
-...+|..++..|++++|+.++++|+.+.+.
T Consensus 198 ~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 198 VRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 4556777889999999999999999998754
No 237
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=28.47 E-value=84 Score=26.80 Aligned_cols=26 Identities=15% Similarity=0.013 Sum_probs=19.0
Q ss_pred HHHHHHH----cCCHHHHHHHHHHHHhhCC
Q 047551 14 IAEEAIA----SGKKQRALKFIKIAQRLND 39 (352)
Q Consensus 14 iA~~~l~----~gd~~~A~kf~~kA~~L~P 39 (352)
++..++. .+|+++|+.++++|.++.|
T Consensus 188 lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~ 217 (273)
T 1ouv_A 188 AGNMYHHGEGATKNFKEALARYSKACELEN 217 (273)
T ss_dssp HHHHHHHTCSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCCCccHHHHHHHHHHHHhCCC
Confidence 4445566 7888888888888888766
No 238
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=28.11 E-value=53 Score=28.07 Aligned_cols=34 Identities=12% Similarity=0.205 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
+.-+..+|..++..|++++|++++.+|+.+.|..
T Consensus 263 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 296 (338)
T 3ro2_A 263 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL 296 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Confidence 3344556677778888888888888888887654
No 239
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=27.70 E-value=73 Score=29.85 Aligned_cols=25 Identities=12% Similarity=0.032 Sum_probs=20.0
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhhCC
Q 047551 15 AEEAIASGKKQRALKFIKIAQRLND 39 (352)
Q Consensus 15 A~~~l~~gd~~~A~kf~~kA~~L~P 39 (352)
+.-+++.|+.+.|++.+++.++.+|
T Consensus 143 vqi~L~~~r~d~A~k~l~~~~~~~~ 167 (310)
T 3mv2_B 143 IEVALLNNNVSTASTIFDNYTNAIE 167 (310)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHCCCHHHHHHHHHHHHhcCc
Confidence 4557788888888888888888888
No 240
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=26.93 E-value=58 Score=29.67 Aligned_cols=33 Identities=9% Similarity=0.031 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
-...+|..+...|++++|+..+.+|+.+.|...
T Consensus 186 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 218 (383)
T 3ulq_A 186 CHSLFATNFLDLKQYEDAISHFQKAYSMAEAEK 218 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcC
Confidence 344556777888999999999999999988654
No 241
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=26.84 E-value=80 Score=24.73 Aligned_cols=18 Identities=28% Similarity=0.322 Sum_probs=12.8
Q ss_pred cCCHHHHHHHHHHHHhhC
Q 047551 21 SGKKQRALKFIKIAQRLN 38 (352)
Q Consensus 21 ~gd~~~A~kf~~kA~~L~ 38 (352)
.+|+++|++++.+|.++.
T Consensus 110 ~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 110 VKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp CCCHHHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHHHHHCC
Confidence 567777777777777663
No 242
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=26.74 E-value=60 Score=28.83 Aligned_cols=31 Identities=10% Similarity=-0.020 Sum_probs=24.8
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 12 IRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 12 ~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
+..|.-....|++++|+..+++|++++|...
T Consensus 103 ~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 133 (308)
T 2ond_A 103 FAYADYEESRMKYEKVHSIYNRLLAIEDIDP 133 (308)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTSSSSCT
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhccccCc
Confidence 3344445678999999999999999999754
No 243
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=26.42 E-value=48 Score=27.24 Aligned_cols=33 Identities=21% Similarity=0.186 Sum_probs=22.6
Q ss_pred CCHHHHHHHHHHHHH-------HHHcCCHHHHHHHHHHHH
Q 047551 3 GNKDEALRCIRIAEE-------AIASGKKQRALKFIKIAQ 35 (352)
Q Consensus 3 ~NkdEA~rc~~iA~~-------~l~~gd~~~A~kf~~kA~ 35 (352)
+|++|+++|+..|+. .+..|+++-|.=.++.|.
T Consensus 4 ~~~ee~~~wl~~A~~dl~~A~~~~~~g~y~~a~F~aqQA~ 43 (141)
T 3o10_A 4 GNPVEARRWLRQARANFSAARNDLHKNANEWVCFKCYLST 43 (141)
T ss_dssp CCHHHHHHHHHHHHHHHHHHGGGTTTTCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhhhhHHhhHHhhCccceEeeehhHHH
Confidence 588999999888864 456677766655444443
No 244
>1o3u_A Conserved hypothetical protein TM0613; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.75A {Thermotoga maritima} SCOP: a.24.16.3
Probab=25.94 E-value=93 Score=25.02 Aligned_cols=32 Identities=19% Similarity=0.025 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRL 37 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L 37 (352)
|.|++-++.|+..++.|+++.|.-.+..|.+.
T Consensus 14 ~~A~~dL~~A~~~l~~g~y~~a~F~aqQA~Ek 45 (135)
T 1o3u_A 14 DAAKDDLEHAKHDLEHGFYNWACFSSQQAAEK 45 (135)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCChHHHHHHHHHHHHH
Confidence 88999999999999999999998888877654
No 245
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=25.17 E-value=66 Score=31.89 Aligned_cols=33 Identities=9% Similarity=0.107 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 047551 7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLND 39 (352)
Q Consensus 7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P 39 (352)
++...++.|.++..+|++++|+.++++|+.+.-
T Consensus 308 ~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~ 340 (490)
T 3n71_A 308 FSKDTLEKIDKARSEGLYHEVVKLCRECLEKQE 340 (490)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 456677888888899999999999999998753
No 246
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=25.10 E-value=84 Score=28.97 Aligned_cols=26 Identities=15% Similarity=0.211 Sum_probs=18.5
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551 15 AEEAIASGKKQRALKFIKIAQRLNDN 40 (352)
Q Consensus 15 A~~~l~~gd~~~A~kf~~kA~~L~P~ 40 (352)
|....+.|+.++|+..+++++.++|.
T Consensus 215 glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 215 AMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 33445667777888888888888777
No 247
>4fx5_A VON willebrand factor type A; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, blood clotting; HET: MSE; 1.73A {Catenulispora acidiphila}
Probab=25.02 E-value=65 Score=31.75 Aligned_cols=47 Identities=17% Similarity=0.104 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCHHHHHHHHH
Q 047551 5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACE 51 (352)
Q Consensus 5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~~~~ll~~~~ 51 (352)
+-++-+.+.-|..+++.||+++|.+.|..|.++-=...-..+++.+.
T Consensus 379 ~~~~a~~~~~a~~~~~~gd~~~A~~~L~~A~~~~~~~g~~~~~~~l~ 425 (464)
T 4fx5_A 379 QAEMAAAIQEGLDAQAAGDLDTATARLGRAMDLAVESGHEDTVKMLR 425 (464)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 45677888889999999999999999999999854332223444443
No 248
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=24.47 E-value=1.8e+02 Score=25.29 Aligned_cols=38 Identities=0% Similarity=-0.149 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCH
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSV 43 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~~ 43 (352)
+......+.+..++..|++++|++.+.+++...+..+.
T Consensus 73 ~~~~~l~~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~ 110 (293)
T 3u3w_A 73 ERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPE 110 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCCCHH
T ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHHhccccCChH
Confidence 44455667789999999999999999999998886553
No 249
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=24.20 E-value=80 Score=26.44 Aligned_cols=31 Identities=19% Similarity=0.140 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLN 38 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~ 38 (352)
+.-+..++..++..+|+++|++++.+|..+.
T Consensus 18 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g 48 (212)
T 3rjv_A 18 RRAQYYLADTWVSSGDYQKAEYWAQKAAAQG 48 (212)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC
Confidence 4457788999999999999999999998874
No 250
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=24.16 E-value=88 Score=21.81 Aligned_cols=42 Identities=26% Similarity=0.303 Sum_probs=32.0
Q ss_pred HHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcc
Q 047551 125 RKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDH 170 (352)
Q Consensus 125 kkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~ 170 (352)
.+.+|.....-||+.. ..+.-+.|.+.|..|++.++....+.
T Consensus 14 ~~~~r~~~~~~~p~~~----~~eisk~lg~~Wk~ls~~eK~~y~~~ 55 (71)
T 4a3n_A 14 AKDERKRLAQQNPDLH----NAELSKMLGKSWKALTLAEKRPFVEE 55 (71)
T ss_dssp HHHHHHHHHTTCTTSC----HHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 4456666777788764 57889999999999998887765554
No 251
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=23.54 E-value=2e+02 Score=22.32 Aligned_cols=55 Identities=13% Similarity=0.149 Sum_probs=36.3
Q ss_pred CCCCCCCCHHHHHHHH----HHhcCCCchhhcCcC-CCCCHHHHHHHHHHhhhhhCCCCC
Q 047551 86 LSGERSYTEEHVELIR----QIKRNKDYYAILGVE-RSCSVEEIRKAYRKLSLKVHPDKN 140 (352)
Q Consensus 86 ~~~~~~~t~~~~~~~~----~~~~~~d~Y~iLgv~-~~a~~~eIkkaYrkla~~~HPDk~ 140 (352)
++.-..||.++-..+. +.....+-+.+|.-. .+-+..+|+..|+.|..++|--+.
T Consensus 30 Ge~VvlWTRe~DR~IL~~cQ~~G~s~~tFa~iA~~L~Nks~nqV~~RFq~Lm~Lf~~~~~ 89 (95)
T 1ug2_A 30 GEKVVLWTREADRVILTMCQEQGAQPHTFSVISQQLGNKTPVEVSHRFRELMQLFHTACE 89 (95)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHTTSCTTTHHHHHHHHSSCCHHHHHHHHHHHHHHHHHCSS
T ss_pred CCEEEEeccccCHHHHHHHHhcCCChhHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHhc
Confidence 4556689976543333 223345566665433 267999999999999999886543
No 252
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=23.44 E-value=72 Score=29.05 Aligned_cols=36 Identities=17% Similarity=0.099 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551 7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS 42 (352)
Q Consensus 7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~ 42 (352)
.|.-+..+|..++..|+++.|+.++.+|+.+++...
T Consensus 140 ~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~ 175 (378)
T 3q15_A 140 KAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHP 175 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTST
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCC
Confidence 344455667777888899999999999998887643
No 253
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=23.02 E-value=89 Score=27.81 Aligned_cols=34 Identities=15% Similarity=0.340 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
+.-+..+|..++..|++++|++++.+|+++.+..
T Consensus 307 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 340 (406)
T 3sf4_A 307 GRACWSLGNAYTALGNHDQAMHFAEKHLEISREV 340 (406)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 3345566777888999999999999999997765
No 254
>2juh_A Telomere binding protein TBP1; helix, nucleus, nuclear protein; NMR {Nicotiana glutinosa}
Probab=22.28 E-value=1.4e+02 Score=24.19 Aligned_cols=78 Identities=12% Similarity=0.289 Sum_probs=53.1
Q ss_pred CCCCCCHHHHHHHHH-Hhc--CCCchhhcCcC----CCCCHHHHHHHHHHhhh--hhCCCCCCC-CCcHHHHHHHHHHHH
Q 047551 88 GERSYTEEHVELIRQ-IKR--NKDYYAILGVE----RSCSVEEIRKAYRKLSL--KVHPDKNKA-PGSEEAFKKVCKAFK 157 (352)
Q Consensus 88 ~~~~~t~~~~~~~~~-~~~--~~d~Y~iLgv~----~~a~~~eIkkaYrkla~--~~HPDk~~~-~~a~e~f~~I~~Ay~ 157 (352)
....||+|+.+++.. +.+ ...|=+|+... ++-|..+||..||.+.. .+.|+.... +-.++....|..|..
T Consensus 16 ~r~~WT~EEd~~L~~gV~k~G~G~W~~Ia~~~~~~f~~RT~v~lKdRWrnllk~~~~~p~~krg~~~p~e~~~rv~~~h~ 95 (121)
T 2juh_A 16 IRRPFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTASIAPQQRRGEPVPQDLLDRVLAAHA 95 (121)
T ss_dssp SSCCCCHHHHHHHHHHHHHHGGGCHHHHHHHHCSCCSSCCSHHHHHHHHHHHHHHHTCSTTCCCSCCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHhccccCCCCHHHHHHHHHHHHhhhccCCcccCCCCCCHHHHHHHHHHHH
Confidence 345799877655543 222 33677776543 57789999999999876 445886654 445666677888988
Q ss_pred hcCchhhh
Q 047551 158 CLSDDDSR 165 (352)
Q Consensus 158 vLsd~~kR 165 (352)
.+++-..+
T Consensus 96 ~~gn~~~~ 103 (121)
T 2juh_A 96 YWSQQQGK 103 (121)
T ss_dssp HHHHHHCC
T ss_pred HHccchhc
Confidence 88875544
No 255
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=21.43 E-value=1.2e+02 Score=23.70 Aligned_cols=28 Identities=14% Similarity=0.139 Sum_probs=22.7
Q ss_pred HHHHHHHHHHH----cCCHHHHHHHHHHHHhh
Q 047551 10 RCIRIAEEAIA----SGKKQRALKFIKIAQRL 37 (352)
Q Consensus 10 rc~~iA~~~l~----~gd~~~A~kf~~kA~~L 37 (352)
-|..++.-++. .+|+++|++++++|..+
T Consensus 59 a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 90 (138)
T 1klx_A 59 GCRFLGDFYENGKYVKKDLRKAAQYYSKACGL 90 (138)
T ss_dssp HHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC
Confidence 35666667777 78999999999999887
No 256
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=20.83 E-value=1.1e+02 Score=25.47 Aligned_cols=32 Identities=19% Similarity=0.164 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 047551 7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLN 38 (352)
Q Consensus 7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~ 38 (352)
-|..++..|+.+...||.+.|--++.++..|.
T Consensus 39 ta~~llr~A~~y~~egd~e~AYily~R~~~L~ 70 (146)
T 2xze_A 39 SGVEIIRMASIYSEEGNIEHAFILYNKYITLF 70 (146)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 36788999999999999999999999876654
No 257
>2roh_A RTBP1, telomere binding protein-1; plant, nucleus, DNA binding protein; NMR {Oryza sativa}
Probab=20.73 E-value=1.7e+02 Score=23.65 Aligned_cols=76 Identities=14% Similarity=0.254 Sum_probs=50.8
Q ss_pred CCCCCCHHHHHHHHH-Hhc--CCCchhhcCcC----CCCCHHHHHHHHHHhhhh--hCCCCCCCCCcHHH-HHHHHHHHH
Q 047551 88 GERSYTEEHVELIRQ-IKR--NKDYYAILGVE----RSCSVEEIRKAYRKLSLK--VHPDKNKAPGSEEA-FKKVCKAFK 157 (352)
Q Consensus 88 ~~~~~t~~~~~~~~~-~~~--~~d~Y~iLgv~----~~a~~~eIkkaYrkla~~--~HPDk~~~~~a~e~-f~~I~~Ay~ 157 (352)
....||+|+.+++.. +.+ ...|=+|+... ++-|..+||..||.+.+. ..|+........+. -..|.+|..
T Consensus 30 ~r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~~~~~RT~vdlKdRWrnllk~~~~~p~~kr~~~~p~e~~~~v~~~h~ 109 (122)
T 2roh_A 30 IRRPFTVAEVELLVEAVEHLGTGRWRDVKFRAFENVHHRTYVDLKDKWKTLVHTASIAPQQRRGAPVPQELLDRVLAAQA 109 (122)
T ss_dssp CCCCCCHHHHHHHHHHHHHHSSSCHHHHHHHHHSSSCCCCHHHHHHHHHHHHHHHHSCTTTCCCSSCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCChHHHHHHhccccCCCCHHHHHHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHH
Confidence 356899877655543 332 34777776532 678999999999998753 46776654444444 567888888
Q ss_pred hcCchh
Q 047551 158 CLSDDD 163 (352)
Q Consensus 158 vLsd~~ 163 (352)
.+++-+
T Consensus 110 ~~g~~~ 115 (122)
T 2roh_A 110 YWSVDS 115 (122)
T ss_dssp HHHSSC
T ss_pred HHhhHH
Confidence 777643
No 258
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=20.33 E-value=74 Score=30.67 Aligned_cols=31 Identities=6% Similarity=-0.150 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551 10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNL 41 (352)
Q Consensus 10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~ 41 (352)
-++.++. ..+.|++++|++.+++|++++|+.
T Consensus 15 ~w~~l~~-~~~~~~~~~a~~~~e~al~~~P~~ 45 (530)
T 2ooe_A 15 AWSILIR-EAQNQPIDKARKTYERLVAQFPSS 45 (530)
T ss_dssp HHHHHHH-HHHSSCHHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHH-HHHhCCHHHHHHHHHHHHHHCCCC
Confidence 3555555 356677777777777777777764
No 259
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=20.09 E-value=1.3e+02 Score=28.99 Aligned_cols=33 Identities=12% Similarity=0.278 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 047551 6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLN 38 (352)
Q Consensus 6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~ 38 (352)
+=|.-..++|.-+...|++++|+.+++||+++.
T Consensus 369 ~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~ 401 (429)
T 3qwp_A 369 VRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIM 401 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 445567788999999999999999999999864
Done!