Query 047555
Match_columns 593
No_of_seqs 339 out of 2250
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 21:31:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047555.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047555hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 7.4E-85 2.5E-89 726.7 58.6 481 111-593 1-488 (605)
2 2kho_A Heat shock protein 70; 100.0 4.7E-83 1.6E-87 712.2 48.9 480 112-593 2-488 (605)
3 1yuw_A Heat shock cognate 71 k 100.0 6.9E-81 2.3E-85 688.4 55.2 478 110-593 2-490 (554)
4 3d2f_A Heat shock protein homo 100.0 5.2E-79 1.8E-83 684.4 53.6 474 112-593 2-494 (675)
5 2v7y_A Chaperone protein DNAK; 100.0 9.7E-78 3.3E-82 658.1 53.4 456 112-593 2-457 (509)
6 3i33_A Heat shock-related 70 k 100.0 3.9E-60 1.3E-64 505.6 43.4 374 110-489 21-403 (404)
7 1dkg_D Molecular chaperone DNA 100.0 8.5E-60 2.9E-64 499.5 39.6 375 112-488 2-383 (383)
8 3qfu_A 78 kDa glucose-regulate 100.0 1.8E-58 6.3E-63 491.0 43.4 372 111-488 17-394 (394)
9 4gni_A Putative heat shock pro 100.0 1.4E-58 4.7E-63 494.4 42.3 372 112-489 13-403 (409)
10 1jce_A ROD shape-determining p 100.0 2.1E-41 7.2E-46 353.1 24.5 312 112-488 3-327 (344)
11 2fxu_A Alpha-actin-1, actin, a 99.9 1.7E-27 5.8E-32 250.7 18.1 299 112-486 5-349 (375)
12 3h1q_A Ethanolamine utilizatio 99.9 4.3E-26 1.5E-30 229.3 24.8 205 221-484 68-272 (272)
13 1k8k_A ARP3, actin-like protei 99.9 6E-27 2.1E-31 250.2 18.9 308 111-486 4-387 (418)
14 2fsj_A Hypothetical protein TA 99.9 8.8E-28 3E-32 249.7 11.3 226 220-485 95-343 (346)
15 4a2a_A Cell division protein F 99.9 2.7E-25 9.4E-30 236.0 23.2 199 258-486 167-393 (419)
16 2ych_A Competence protein PILM 99.9 1.3E-26 4.6E-31 244.2 11.8 319 111-485 12-373 (377)
17 2zgy_A Plasmid segregation pro 99.9 1.4E-23 4.8E-28 216.0 8.2 228 217-484 71-319 (320)
18 1k8k_B ARP2, actin-like protei 99.9 1.2E-23 4.1E-28 222.6 2.4 302 111-486 5-364 (394)
19 3dob_A Heat shock 70 kDa prote 99.8 6.4E-20 2.2E-24 166.0 13.8 98 496-593 2-99 (152)
20 3dqg_A Heat shock 70 kDa prote 99.8 6.9E-20 2.4E-24 165.6 13.9 98 496-593 2-99 (151)
21 3h0x_A 78 kDa glucose-regulate 99.8 7.9E-20 2.7E-24 165.6 12.9 98 496-593 2-99 (152)
22 4e81_A Chaperone protein DNAK; 99.8 1.4E-19 4.8E-24 174.0 13.0 99 495-593 2-100 (219)
23 3n8e_A Stress-70 protein, mito 99.8 1.5E-19 5.1E-24 168.1 12.4 103 491-593 17-119 (182)
24 1q5l_A Chaperone protein DNAK; 99.8 8.3E-20 2.8E-24 162.1 10.0 103 491-593 14-116 (135)
25 3qb0_A Actin-related protein 4 99.8 8.6E-19 2.9E-23 188.0 15.2 182 112-347 23-209 (498)
26 2op6_A Heat shock 70 kDa prote 99.8 1.1E-18 3.9E-23 158.8 13.4 98 496-593 2-99 (152)
27 3js6_A Uncharacterized PARM pr 99.8 3.6E-18 1.2E-22 177.4 16.7 204 247-489 115-339 (355)
28 3dwl_A Actin-related protein 3 99.8 2.1E-19 7.1E-24 190.9 5.2 250 217-486 96-396 (427)
29 1u00_A HSC66, chaperone protei 99.7 2E-17 6.7E-22 160.6 13.2 97 497-593 1-97 (227)
30 4ehu_A Activator of 2-hydroxyi 99.7 2.4E-17 8.2E-22 165.8 13.8 185 271-487 69-255 (276)
31 4apw_A ALP12; actin-like prote 99.7 1.3E-17 4.4E-22 171.8 3.2 202 247-487 107-325 (329)
32 4fo0_A Actin-related protein 8 99.6 2.2E-14 7.4E-19 159.8 26.2 116 222-348 173-294 (593)
33 2d0o_A DIOL dehydratase-reacti 99.4 2.9E-12 9.8E-17 134.5 14.0 200 258-485 367-603 (610)
34 1nbw_A Glycerol dehydratase re 99.4 2.7E-12 9.4E-17 135.1 12.4 197 259-484 370-604 (607)
35 4am6_A Actin-like protein ARP8 99.2 3.5E-10 1.2E-14 122.5 16.4 145 223-381 196-346 (655)
36 1hux_A Activator of (R)-2-hydr 98.8 9.9E-08 3.4E-12 94.9 17.8 73 411-487 185-257 (270)
37 2ews_A Pantothenate kinase; PA 97.4 0.0016 5.6E-08 64.5 14.0 74 406-484 208-286 (287)
38 2i7n_A Pantothenate kinase 1; 97.2 0.0024 8.4E-08 65.0 12.6 69 411-484 279-358 (360)
39 3mdq_A Exopolyphosphatase; str 96.9 0.027 9.3E-07 56.7 17.0 77 260-341 91-170 (315)
40 2ivn_A O-sialoglycoprotein end 96.9 0.47 1.6E-05 47.8 28.8 65 419-488 230-300 (330)
41 1t6c_A Exopolyphosphatase; alp 96.8 0.0057 2E-07 61.7 10.7 77 260-341 99-177 (315)
42 2e2o_A Hexokinase; acetate and 96.6 0.19 6.3E-06 49.9 20.2 58 245-308 60-118 (299)
43 3vgl_A Glucokinase; ROK family 96.4 0.29 1E-05 49.1 20.3 43 271-315 96-140 (321)
44 2itm_A Xylulose kinase, xylulo 96.4 0.0052 1.8E-07 66.0 7.6 79 412-490 360-438 (484)
45 3l0q_A Xylulose kinase; xlylul 96.3 0.0071 2.4E-07 66.1 8.4 85 405-490 409-493 (554)
46 3eno_A Putative O-sialoglycopr 96.3 1.1 3.9E-05 45.1 24.3 68 417-489 233-306 (334)
47 2zf5_O Glycerol kinase; hypert 96.2 0.0083 2.8E-07 64.6 8.2 78 411-490 367-444 (497)
48 3ll3_A Gluconate kinase; xylul 96.2 0.0099 3.4E-07 64.1 8.5 79 412-491 367-445 (504)
49 3hz6_A Xylulokinase; xylulose, 96.2 0.0078 2.7E-07 65.0 7.7 77 412-491 378-455 (511)
50 4db3_A Glcnac kinase, N-acetyl 96.1 0.69 2.4E-05 46.5 21.5 44 270-315 119-164 (327)
51 4bc3_A Xylulose kinase; transf 96.0 0.013 4.3E-07 63.9 8.4 78 411-489 407-484 (538)
52 3i8b_A Xylulose kinase; strain 95.9 0.01 3.5E-07 64.2 7.0 77 412-489 398-474 (515)
53 3g25_A Glycerol kinase; IDP007 95.9 0.0096 3.3E-07 64.2 6.8 80 412-492 377-457 (501)
54 3ifr_A Carbohydrate kinase, FG 95.8 0.0093 3.2E-07 64.4 6.4 53 437-490 399-451 (508)
55 2qm1_A Glucokinase; alpha-beta 95.8 0.39 1.3E-05 48.0 18.0 43 271-315 108-152 (326)
56 3vov_A Glucokinase, hexokinase 95.8 0.82 2.8E-05 45.3 20.0 44 270-315 97-142 (302)
57 3ezw_A Glycerol kinase; glycer 95.7 0.011 3.7E-07 64.2 6.4 56 437-493 401-456 (526)
58 2p3r_A Glycerol kinase; glycer 95.7 0.011 3.8E-07 63.8 6.1 77 413-490 375-452 (510)
59 3cer_A Possible exopolyphospha 95.6 0.12 4.1E-06 52.6 13.2 79 260-341 104-191 (343)
60 3h3n_X Glycerol kinase; ATP-bi 95.6 0.013 4.3E-07 63.3 6.3 53 438-491 403-455 (506)
61 4e1j_A Glycerol kinase; struct 95.6 0.011 3.9E-07 63.9 5.9 54 438-492 425-478 (520)
62 2dpn_A Glycerol kinase; thermu 95.5 0.02 6.7E-07 61.7 7.5 77 412-489 371-448 (495)
63 3r8e_A Hypothetical sugar kina 95.5 0.35 1.2E-05 48.6 16.4 45 269-315 115-162 (321)
64 1u6z_A Exopolyphosphatase; alp 95.5 0.12 4.2E-06 55.6 13.6 76 261-341 99-176 (513)
65 2ch5_A NAGK protein; transfera 95.5 2.4 8.4E-05 42.5 29.5 61 244-309 70-133 (347)
66 3jvp_A Ribulokinase; PSI-II, N 95.5 0.014 4.9E-07 63.9 6.2 77 412-489 413-490 (572)
67 2w40_A Glycerol kinase, putati 95.3 0.02 6.9E-07 61.7 6.5 52 438-490 406-458 (503)
68 2d4w_A Glycerol kinase; alpha 95.2 0.023 7.8E-07 61.3 6.8 52 438-490 403-454 (504)
69 2gup_A ROK family protein; sug 95.0 0.95 3.2E-05 44.5 17.5 45 269-315 92-136 (292)
70 2hoe_A N-acetylglucosamine kin 95.0 3.6 0.00012 42.1 22.4 70 411-485 292-370 (380)
71 2ap1_A Putative regulator prot 94.8 2 6.8E-05 42.9 19.6 43 271-315 120-164 (327)
72 2uyt_A Rhamnulokinase; rhamnos 94.5 0.037 1.3E-06 59.3 6.0 48 437-486 392-439 (489)
73 1zc6_A Probable N-acetylglucos 94.2 4.7 0.00016 39.7 25.2 64 414-486 228-293 (305)
74 1z6r_A MLC protein; transcript 94.0 2 6.7E-05 44.5 17.9 43 271-315 186-230 (406)
75 1zbs_A Hypothetical protein PG 93.8 1.5 5.1E-05 43.1 15.8 61 244-309 59-121 (291)
76 3en9_A Glycoprotease, O-sialog 93.7 9 0.00031 41.1 26.4 183 244-462 72-272 (540)
77 3bex_A Type III pantothenate k 93.2 3.2 0.00011 39.9 16.4 20 113-132 4-23 (249)
78 1z05_A Transcriptional regulat 93.2 3.1 0.00011 43.3 17.7 43 271-315 208-252 (429)
79 1sz2_A Glucokinase, glucose ki 92.8 8.4 0.00029 38.4 23.8 48 268-316 98-157 (332)
80 3ven_A O-carbamoyltransferase 91.7 1.7 6E-05 46.8 13.5 79 407-490 280-361 (576)
81 3zyy_X Iron-sulfur cluster bin 91.6 9.8 0.00034 41.5 19.3 57 402-459 499-555 (631)
82 3h6e_A Carbohydrate kinase, FG 90.8 0.21 7.1E-06 53.3 5.2 72 411-487 362-436 (482)
83 3cet_A Conserved archaeal prot 90.1 0.38 1.3E-05 48.1 6.0 38 278-317 110-147 (334)
84 3hi0_A Putative exopolyphospha 84.0 1.7 5.7E-05 46.6 7.2 76 260-340 102-178 (508)
85 3o8m_A Hexokinase; rnaseh-like 82.5 11 0.00037 39.8 12.5 57 258-316 185-243 (485)
86 4g9i_A Hydrogenase maturation 80.4 4.6 0.00016 45.4 9.2 61 421-486 693-759 (772)
87 2yhx_A Hexokinase B; transfera 79.7 3.9 0.00013 43.0 8.0 55 259-315 164-220 (457)
88 3ttc_A HYPF, transcriptional r 78.4 4.7 0.00016 44.3 8.2 63 419-486 585-651 (657)
89 3vth_A Hydrogenase maturation 77.3 5.1 0.00017 44.9 8.2 50 439-488 694-749 (761)
90 1woq_A Inorganic polyphosphate 74.9 54 0.0019 31.1 14.3 43 271-315 114-159 (267)
91 1iv0_A Hypothetical protein; r 73.3 2.1 7.3E-05 34.6 2.9 19 113-131 2-20 (98)
92 1nu0_A Hypothetical protein YQ 71.4 3.1 0.00011 36.0 3.7 22 111-132 2-23 (138)
93 3hz6_A Xylulokinase; xylulose, 69.7 3 0.0001 44.6 4.0 21 111-131 4-24 (511)
94 3ll3_A Gluconate kinase; xylul 69.2 3.1 0.00011 44.4 3.9 21 111-131 3-23 (504)
95 4htl_A Beta-glucoside kinase; 68.4 43 0.0015 32.5 12.0 69 413-486 217-291 (297)
96 3mcp_A Glucokinase; structural 67.5 26 0.00089 35.5 10.3 20 111-130 8-27 (366)
97 3l0q_A Xylulose kinase; xlylul 66.5 4 0.00014 44.1 4.2 21 111-131 4-24 (554)
98 3aap_A Ectonucleoside triphosp 66.3 8.4 0.00029 39.0 6.3 20 296-315 139-158 (353)
99 3qbx_A Anhydro-N-acetylmuramic 65.9 11 0.00037 38.2 6.9 67 417-486 265-336 (371)
100 1bdg_A Hexokinase; phosphotran 64.9 1.1E+02 0.0036 31.9 14.6 57 257-315 171-229 (451)
101 2uyt_A Rhamnulokinase; rhamnos 64.6 3.5 0.00012 43.7 3.3 21 110-130 2-22 (489)
102 3epq_A Putative fructokinase; 62.1 40 0.0014 33.0 10.3 43 271-315 97-141 (302)
103 3h3n_X Glycerol kinase; ATP-bi 61.8 5.9 0.0002 42.2 4.4 21 111-131 4-24 (506)
104 3i8b_A Xylulose kinase; strain 61.3 6.1 0.00021 42.2 4.4 20 111-130 4-23 (515)
105 4htl_A Beta-glucoside kinase; 61.1 18 0.00062 35.3 7.5 43 271-315 97-141 (297)
106 1cza_N Hexokinase type I; stru 60.9 23 0.00077 40.7 9.2 57 257-315 630-689 (917)
107 4bc3_A Xylulose kinase; transf 60.5 6.1 0.00021 42.5 4.2 21 111-131 9-29 (538)
108 3jvp_A Ribulokinase; PSI-II, N 60.4 5 0.00017 43.5 3.6 21 111-131 4-24 (572)
109 3h6e_A Carbohydrate kinase, FG 59.9 4.6 0.00016 42.8 3.1 21 111-131 5-25 (482)
110 3ezw_A Glycerol kinase; glycer 59.9 5.8 0.0002 42.5 3.9 21 111-131 3-23 (526)
111 3cj1_A Ectonucleoside triphosp 59.8 65 0.0022 33.6 11.8 49 296-345 189-251 (456)
112 3ifr_A Carbohydrate kinase, FG 59.5 6.4 0.00022 42.0 4.1 21 111-131 6-26 (508)
113 1vhx_A Putative holliday junct 59.1 5.2 0.00018 35.1 2.8 19 113-131 4-22 (150)
114 2p3r_A Glycerol kinase; glycer 58.7 6.4 0.00022 42.0 4.0 21 111-131 2-22 (510)
115 2aa4_A Mannac kinase, putative 58.1 14 0.00049 35.7 6.2 68 412-484 212-286 (289)
116 3hm8_A Hexokinase-3; glucose, 57.0 1.6E+02 0.0054 30.5 14.0 57 258-316 160-219 (445)
117 3djc_A Type III pantothenate k 56.9 7 0.00024 37.8 3.5 70 405-484 182-253 (266)
118 2w40_A Glycerol kinase, putati 56.5 7.1 0.00024 41.5 3.9 21 111-131 3-23 (503)
119 3f9m_A Glucokinase; hexokinase 55.4 1.6E+02 0.0054 30.7 13.8 57 258-316 184-243 (470)
120 2dpn_A Glycerol kinase; thermu 55.2 6.8 0.00023 41.6 3.4 20 112-131 2-21 (495)
121 3cqy_A Anhydro-N-acetylmuramic 54.9 24 0.00082 35.7 7.1 48 412-463 267-314 (370)
122 1hjr_A Holliday junction resol 54.5 15 0.00051 32.4 5.0 19 112-130 1-19 (158)
123 2zf5_O Glycerol kinase; hypert 52.7 9 0.00031 40.6 3.9 21 111-131 2-22 (497)
124 3g25_A Glycerol kinase; IDP007 50.8 9.9 0.00034 40.4 3.8 20 112-131 6-25 (501)
125 2ews_A Pantothenate kinase; PA 50.0 9.3 0.00032 37.4 3.2 22 111-132 19-40 (287)
126 4e1j_A Glycerol kinase; struct 49.3 11 0.00036 40.4 3.8 20 112-131 26-45 (520)
127 1saz_A Probable butyrate kinas 47.7 35 0.0012 34.6 7.3 69 414-485 274-347 (381)
128 4ep4_A Crossover junction endo 46.3 20 0.00067 31.9 4.4 19 112-130 1-19 (166)
129 1cza_N Hexokinase type I; stru 44.7 1.8E+02 0.006 33.3 13.2 56 258-316 183-241 (917)
130 3zx3_A Ectonucleoside triphosp 44.2 65 0.0022 33.5 8.6 89 227-315 88-199 (452)
131 2itm_A Xylulose kinase, xylulo 41.5 15 0.00051 38.7 3.4 18 114-131 2-19 (484)
132 2d4w_A Glycerol kinase; alpha 41.3 16 0.00056 38.7 3.7 19 113-131 3-21 (504)
133 3o8m_A Hexokinase; rnaseh-like 40.7 76 0.0026 33.3 8.6 52 296-347 79-136 (485)
134 3htv_A D-allose kinase, alloki 37.8 71 0.0024 31.2 7.6 67 415-486 221-299 (310)
135 1nbw_A Glycerol dehydratase re 36.9 15 0.00052 39.2 2.4 32 247-278 132-163 (607)
136 3epq_A Putative fructokinase; 35.6 84 0.0029 30.5 7.6 21 111-131 2-22 (302)
137 2yhx_A Hexokinase B; transfera 34.3 1.4E+02 0.0049 30.9 9.5 54 295-348 59-118 (457)
138 3zyy_X Iron-sulfur cluster bin 32.9 79 0.0027 34.4 7.3 44 411-454 262-305 (631)
139 2h3g_X Biosynthetic protein; p 32.2 31 0.0011 33.2 3.7 71 406-485 181-251 (268)
140 2yhw_A Bifunctional UDP-N-acet 30.8 1E+02 0.0034 30.4 7.4 43 271-315 131-175 (343)
141 1saz_A Probable butyrate kinas 30.5 41 0.0014 34.1 4.5 21 112-132 2-22 (381)
142 1zxo_A Conserved hypothetical 29.7 11 0.00039 36.6 0.1 46 438-485 232-277 (291)
143 1msz_A DNA-binding protein smu 29.3 49 0.0017 25.8 3.6 28 248-275 34-61 (86)
144 2pfu_A Biopolymer transport EX 28.5 1.2E+02 0.0039 23.7 6.1 75 198-283 21-95 (99)
145 3htv_A D-allose kinase, alloki 27.9 37 0.0013 33.3 3.5 43 270-314 106-149 (310)
146 1zxo_A Conserved hypothetical 26.4 27 0.00094 33.8 2.2 59 245-308 58-118 (291)
147 3cet_A Conserved archaeal prot 26.4 39 0.0013 33.6 3.2 38 114-151 2-44 (334)
148 3ist_A Glutamate racemase; str 25.6 1.1E+02 0.0037 29.3 6.3 44 437-483 177-220 (269)
149 1hnj_A Beta-ketoacyl-acyl carr 25.3 81 0.0028 30.6 5.5 51 412-465 211-261 (317)
150 3uhf_A Glutamate racemase; str 24.4 81 0.0028 30.4 5.1 43 438-483 196-238 (274)
151 2f9w_A Pantothenate kinase; CO 24.2 60 0.002 31.3 4.1 21 112-132 23-44 (271)
152 1kae_A HDH, histidinol dehydro 24.1 3.6E+02 0.012 27.6 9.9 97 208-317 126-245 (434)
153 2q2r_A Glucokinase 1, putative 23.9 81 0.0028 31.6 5.3 21 111-131 28-48 (373)
154 3qvl_A Putative hydantoin race 22.0 1.2E+02 0.0042 28.4 5.8 38 438-480 174-211 (245)
155 3hm8_A Hexokinase-3; glucose, 21.9 2.6E+02 0.009 28.8 8.6 30 295-325 57-86 (445)
156 3nuw_A 2-OXO-3-deoxygalactonat 21.2 70 0.0024 31.2 3.9 44 440-485 248-291 (295)
157 1ub7_A 3-oxoacyl-[acyl-carrier 20.9 1.1E+02 0.0036 29.8 5.4 51 412-465 213-263 (322)
158 2e1z_A Propionate kinase; TDCD 20.3 97 0.0033 31.7 4.8 26 437-462 329-355 (415)
159 1mzj_A Beta-ketoacylsynthase I 20.2 1.4E+02 0.0048 29.3 6.1 50 413-465 225-274 (339)
160 2x3e_A 3-oxoacyl-[acyl-carrier 20.0 1.5E+02 0.0052 28.9 6.3 50 413-465 218-267 (331)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=7.4e-85 Score=726.68 Aligned_cols=481 Identities=60% Similarity=0.968 Sum_probs=460.1
Q ss_pred CCeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEEeCCcEEecHHHHHhhhhCCCchhhhhhhhhCCCCc--
Q 047555 111 NEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMS-- 188 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~V~~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~~lg~~~~-- 188 (593)
|+.+||||||||||+||++.+|.++++.|+.|++++||+|+|.+++++++|..|+.+...+|.++++++|+++|+.++
T Consensus 1 M~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 80 (605)
T 4b9q_A 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (605)
T ss_dssp -CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSH
T ss_pred CCcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCH
Confidence 467999999999999999999999999999999999999999988899999999999999999999999999999987
Q ss_pred hhhhhhccCceEEEECCCCcEEEEeCCCCeeeeHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHHH
Q 047555 189 EVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLNDKITKAVVTVPAYFNDSQRTATKDAG 268 (593)
Q Consensus 189 ~~~~~~~~~~~~v~~~~~g~~~i~~~~~~~~~~~~~l~~~~L~~l~~~a~~~l~~~~~~~viTVPa~~~~~~r~~l~~Aa 268 (593)
.++.+.+.+||.++...++.+.+.+. ++.++++++.+++|++|++.++.+++..+.++|||||++|++.||+++++|+
T Consensus 81 ~v~~~~~~~p~~~~~~~~g~~~~~~~--~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa 158 (605)
T 4b9q_A 81 EVQRDVSIMPFKIIAADNGDAWVEVK--GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (605)
T ss_dssp HHHHHHTTCSSEEEECTTSBEEEEET--TEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEEcCCCceEEEEC--CEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 57888899999999999998888775 7899999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceEEEechhHHHHHHhccccC-CCceEEEEeeCCceEEEEEEEEcC----CEEEEEEecCCCCccHHHHHHHHHH
Q 047555 269 RIAGLEVLRIINEPTAASLAYGFERK-NNETILVFDLGGGTFDVSVLEVGD----GVFEVLSTSGDTHLGGDDFDKRVVD 343 (593)
Q Consensus 269 ~~AGl~~v~li~Ep~AAal~~~~~~~-~~~~vlVvD~GggT~Dvsv~~~~~----~~~~vl~~~~~~~lGG~~id~~l~~ 343 (593)
+.||++++++++||+|||++|+.... .+..++|||+||||+|++++++.+ +.++++++.++..+||.+||++|++
T Consensus 159 ~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~ 238 (605)
T 4b9q_A 159 RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLIN 238 (605)
T ss_dssp HHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHH
Confidence 99999999999999999999987764 478999999999999999999987 8999999999999999999999999
Q ss_pred HHHHHhhhhhCCCCcCCHHHHHHHHHHHHHHhhhcCCCceeeEEeccccccCCCCceeEEEecHHHHHHHHHHHHHHHHH
Q 047555 344 WLAENFKRDEGVVLLNDKQALQRLTEAAEKAKMELSSLTQANISLPFITATADGPKHIETTLTRAKFEELCSDLLDRLKK 423 (593)
Q Consensus 344 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~ 423 (593)
|+.++|+++.+.++..+++.+.+|+++||++|+.|+......+.++.+..+..++.++.+.|+|++|+++++|+++++.+
T Consensus 239 ~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~ 318 (605)
T 4b9q_A 239 YLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIE 318 (605)
T ss_dssp HHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTH
T ss_pred HHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988777666667889999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhcCCCCceEEEeccccc
Q 047555 424 PVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLAGDVSDIVLLDVTPLS 503 (593)
Q Consensus 424 ~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~~s 503 (593)
+++++|+++++...+|+.|+||||+|++|+|++.|++.||.++....||++|||+|||++|+.+++..+++++.|++|++
T Consensus 319 ~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~~~~~~~~l~dv~p~s 398 (605)
T 4b9q_A 319 PLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLS 398 (605)
T ss_dssp HHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHHTSSCSEEEECBCSSC
T ss_pred HHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhcCCCCceEEEeeeeeE
Confidence 99999999999989999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred ceEEeeCCEEEEeecCCCccCCeeEEEEEecCCCceeEEEEEEecCcccccCCceeeEEEEeCCCCCCCCcCeEEEEEEE
Q 047555 504 IGLETLGGVMTKIIPRNTTLPTSKSEVFSTAGDGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDI 583 (593)
Q Consensus 504 ~gi~~~~~~~~~li~~g~~~P~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~~ 583 (593)
||+++.++.|.+||++|+++|++++++|++..|+|+.+.|.|||||+.+..+|+.||+|.|+|+|++|+|.++|+|+|++
T Consensus 399 lgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~i 478 (605)
T 4b9q_A 399 LGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDI 478 (605)
T ss_dssp EEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEE
T ss_pred EEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCceEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEc
Q 047555 584 DANGILSVTA 593 (593)
Q Consensus 584 d~~g~l~v~a 593 (593)
|.||+|+|+|
T Consensus 479 d~~gil~v~a 488 (605)
T 4b9q_A 479 DADGILHVSA 488 (605)
T ss_dssp CTTSCEEEEE
T ss_pred cCCcEEEEEE
Confidence 9999999986
No 2
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=4.7e-83 Score=712.16 Aligned_cols=480 Identities=60% Similarity=0.977 Sum_probs=452.3
Q ss_pred CeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEEeCCcEEecHHHHHhhhhCCCchhhhhhhhhCCCCc--h
Q 047555 112 EKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMS--E 189 (593)
Q Consensus 112 ~~vVGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~V~~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~~lg~~~~--~ 189 (593)
+.+||||||||||+||++.+|.++++.|+.|.+++||+|+|.++++++||+.|+.+...+|+++++++|+++|+.++ +
T Consensus 2 ~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~ 81 (605)
T 2kho_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp --CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTT
T ss_pred CCEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHH
Confidence 46899999999999999999999999999999999999999878899999999999999999999999999999876 4
Q ss_pred hhhhhccCceEEEECCCCcEEEEeCCCCeeeeHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHHHH
Q 047555 190 VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLNDKITKAVVTVPAYFNDSQRTATKDAGR 269 (593)
Q Consensus 190 ~~~~~~~~~~~v~~~~~g~~~i~~~~~~~~~~~~~l~~~~L~~l~~~a~~~l~~~~~~~viTVPa~~~~~~r~~l~~Aa~ 269 (593)
++.+.+.+||.++.+.+|.+.+.+. ++.++++++.+++|++|++.++.+++..+.++|||||++|++.||+++++|++
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~i~~~--g~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~~ 159 (605)
T 2kho_A 82 VQRDVSIMPFKIIAADNGDAWVEVK--GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGR 159 (605)
T ss_dssp HHHHHHHCSSCEEECTTSBEEEEET--TEEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEECCCCceEEEEC--CEEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHHH
Confidence 6667778999999888998888874 67899999999999999999999999989999999999999999999999999
Q ss_pred HcCCceEEEechhHHHHHHhccccC-CCceEEEEeeCCceEEEEEEEEc----CCEEEEEEecCCCCccHHHHHHHHHHH
Q 047555 270 IAGLEVLRIINEPTAASLAYGFERK-NNETILVFDLGGGTFDVSVLEVG----DGVFEVLSTSGDTHLGGDDFDKRVVDW 344 (593)
Q Consensus 270 ~AGl~~v~li~Ep~AAal~~~~~~~-~~~~vlVvD~GggT~Dvsv~~~~----~~~~~vl~~~~~~~lGG~~id~~l~~~ 344 (593)
.||++++++++||+|||++|+.+.. .+..+||||+||||+|++++++. ++.++++++.++..+||.+||+.|++|
T Consensus 160 ~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~ 239 (605)
T 2kho_A 160 IAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINY 239 (605)
T ss_dssp TTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHH
T ss_pred HcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHH
Confidence 9999999999999999999998765 57899999999999999999998 789999999999999999999999999
Q ss_pred HHHHhhhhhCCCCcCCHHHHHHHHHHHHHHhhhcCCCceeeEEeccccccCCCCceeEEEecHHHHHHHHHHHHHHHHHH
Q 047555 345 LAENFKRDEGVVLLNDKQALQRLTEAAEKAKMELSSLTQANISLPFITATADGPKHIETTLTRAKFEELCSDLLDRLKKP 424 (593)
Q Consensus 345 l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~ 424 (593)
+.++|+++++.++..+++.+.+|+++||++|+.|+......+.++.+..+.+++.++.+.|+|++|+++++|+++++.++
T Consensus 240 l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~ 319 (605)
T 2kho_A 240 LVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEP 319 (605)
T ss_dssp HHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGTSH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHHHH
Confidence 99999999998888899999999999999999999998888888876655444456788999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhcCCCCceEEEecccccc
Q 047555 425 VETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLAGDVSDIVLLDVTPLSI 504 (593)
Q Consensus 425 i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~~s~ 504 (593)
++++|+++++...+|+.|+||||+|++|+|++.|++.||.++....||++|||+|||++|+.+++..+++++.|++|++|
T Consensus 320 i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~~~~~~~l~dv~p~sl 399 (605)
T 2kho_A 320 LKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSL 399 (605)
T ss_dssp HHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTTSCCCCCCSBCCCCCE
T ss_pred HHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcCCccCceEEeeeeeec
Confidence 99999999998889999999999999999999999999998989999999999999999999998888999999999999
Q ss_pred eEEeeCCEEEEeecCCCccCCeeEEEEEecCCCceeEEEEEEecCcccccCCceeeEEEEeCCCCCCCCcCeEEEEEEEC
Q 047555 505 GLETLGGVMTKIIPRNTTLPTSKSEVFSTAGDGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDID 584 (593)
Q Consensus 505 gi~~~~~~~~~li~~g~~~P~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~~d 584 (593)
|+++.++.|.+||++|+++|+++++.|++..|+|+.+.|.||||++.+..+|+.||+|.|+|+|+.|+|.++|+|+|++|
T Consensus 400 gi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id 479 (605)
T 2kho_A 400 GIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDID 479 (605)
T ss_dssp EEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSCEEEEEEEC
T ss_pred cccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCcEEEEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEc
Q 047555 585 ANGILSVTA 593 (593)
Q Consensus 585 ~~g~l~v~a 593 (593)
.||+|+|+|
T Consensus 480 ~~gil~v~a 488 (605)
T 2kho_A 480 ADGILHVSA 488 (605)
T ss_dssp TTSCEEEEE
T ss_pred CCCceeEEE
Confidence 999999986
No 3
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=6.9e-81 Score=688.42 Aligned_cols=478 Identities=54% Similarity=0.844 Sum_probs=443.7
Q ss_pred CCCeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEEeCCcEEecHHHHHhhhhCCCchhhhhhhhhCCCCc-
Q 047555 110 VNEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMS- 188 (593)
Q Consensus 110 ~~~~vVGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~V~~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~~lg~~~~- 188 (593)
.|+.+||||||||||+||++.+|.++++.|+.|++++||+|+|.++ +++||++|+.+...+|+++++++|+++|++++
T Consensus 2 ~m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~-~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d 80 (554)
T 1yuw_A 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDD 80 (554)
T ss_dssp CSCCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSS-CEEETHHHHTTTTTCGGGEECCGGGTTTCCSSC
T ss_pred CCCCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCC-cEEEcHHHHHhhhhChhhehHhhHHhcCCCCCc
Confidence 3567999999999999999999999999999999999999999865 79999999999999999999999999999876
Q ss_pred -hhhhhhccCceEEEECCCCcEEEEeCC--CCeeeeHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHH
Q 047555 189 -EVDDESKQVSYRVVRDENGNVKLDCPA--IGKQFAAEEISAQVLRKLVDDASKFLNDKITKAVVTVPAYFNDSQRTATK 265 (593)
Q Consensus 189 -~~~~~~~~~~~~v~~~~~g~~~i~~~~--~~~~~~~~~l~~~~L~~l~~~a~~~l~~~~~~~viTVPa~~~~~~r~~l~ 265 (593)
.++.+.+.|||.++. .+|...+.+.. ..+.++|+++++++|++|++.++.+++..+.++|||||++|++.||++++
T Consensus 81 ~~v~~~~~~~p~~v~~-~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~ 159 (554)
T 1yuw_A 81 AVVQSDMKHWPFMVVN-DAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATK 159 (554)
T ss_dssp SHHHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHH
T ss_pred HHHHHHhhcCCeEEEe-cCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHH
Confidence 567778899999884 46776665543 34679999999999999999999999998999999999999999999999
Q ss_pred HHHHHcCCceEEEechhHHHHHHhccccC--CCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHHHHHHHH
Q 047555 266 DAGRIAGLEVLRIINEPTAASLAYGFERK--NNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVD 343 (593)
Q Consensus 266 ~Aa~~AGl~~v~li~Ep~AAal~~~~~~~--~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~id~~l~~ 343 (593)
+|++.||++++.+++||+|||++|+.+.. .+..+||||+||||+|++++++.++.+++++..++..+||.+||+.|++
T Consensus 160 ~A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~ 239 (554)
T 1yuw_A 160 DAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVN 239 (554)
T ss_dssp HHHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999988754 4689999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhCCCCcCCHHHHHHHHHHHHHHhhhcCCCceeeEEeccccccCCCCceeEEEecHHHHHHHHHHHHHHHHH
Q 047555 344 WLAENFKRDEGVVLLNDKQALQRLTEAAEKAKMELSSLTQANISLPFITATADGPKHIETTLTRAKFEELCSDLLDRLKK 423 (593)
Q Consensus 344 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~ 423 (593)
++.++|+++++.++..+++.+.+|+++||++|+.|+......+.++.+..+ .++...|+|++|+++++++++++.+
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g----~~~~~~ltr~~~e~l~~~~~~~i~~ 315 (554)
T 1yuw_A 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG----IDFYTSITRARFEELNADLFRGTLD 315 (554)
T ss_dssp HHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSS----CCEEEEEEHHHHHHHTHHHHHHTTH
T ss_pred HHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCC----ceEEEEEEHHHHHHHHHHHHHHHHH
Confidence 999999999988888899999999999999999999988888888754332 3578999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhC-CCCCCCCCChhHHHhHHHHHhhhhcCC----CCceEEEe
Q 047555 424 PVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTG-KDPNVTVNPDEVVALGAAVQGGVLAGD----VSDIVLLD 498 (593)
Q Consensus 424 ~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g-~~v~~~~~p~~aVA~GAal~a~~l~~~----~~~~~~~~ 498 (593)
.++++|+++++...+|+.|+||||++++|+|++.|++.|+ .++....||++|||+|||++|+.+++. .+++++.|
T Consensus 316 ~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~d 395 (554)
T 1yuw_A 316 PVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLD 395 (554)
T ss_dssp HHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCC
T ss_pred HHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEE
Confidence 9999999999888899999999999999999999999995 788889999999999999999998874 57889999
Q ss_pred cccccceEEeeCCEEEEeecCCCccCCeeEEEEEecCCCceeEEEEEEecCcccccCCceeeEEEEeCCCCCCCCcCeEE
Q 047555 499 VTPLSIGLETLGGVMTKIIPRNTTLPTSKSEVFSTAGDGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIE 578 (593)
Q Consensus 499 ~~~~s~gi~~~~~~~~~li~~g~~~P~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~~i~ 578 (593)
++|++||+++.++.|.+||++|++||+++++.|++..|+|+.+.|.||||++.+..+|+.||+|.|+|+|++|+|.++|+
T Consensus 396 v~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~ 475 (554)
T 1yuw_A 396 VTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIE 475 (554)
T ss_dssp BCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEE
T ss_pred eeeeEEEEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEECCCceEEEEc
Q 047555 579 VKFDIDANGILSVTA 593 (593)
Q Consensus 579 v~f~~d~~g~l~v~a 593 (593)
|+|++|.||+|+|+|
T Consensus 476 v~f~id~~gil~v~a 490 (554)
T 1yuw_A 476 VTFDIDANGILNVSA 490 (554)
T ss_dssp EEEEECTTCCEEEEE
T ss_pred EEEEEccCceEEEEE
Confidence 999999999999986
No 4
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=5.2e-79 Score=684.40 Aligned_cols=474 Identities=28% Similarity=0.471 Sum_probs=435.4
Q ss_pred CeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEEeCCcEEecHHHHHhhhhCCCchhhhhhhhhCCCCc--h
Q 047555 112 EKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMS--E 189 (593)
Q Consensus 112 ~~vVGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~V~~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~~lg~~~~--~ 189 (593)
+.+||||||||||+||++.+|.++++.|+.|++.+||+|+|.++ +++||+.|+.+...+|.++++++|+++|+.++ .
T Consensus 2 m~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~-~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 80 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPK-NRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPD 80 (675)
T ss_dssp CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSS-SEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTT
T ss_pred CcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCC-cEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHH
Confidence 45899999999999999999999999999999999999999864 79999999999999999999999999999886 5
Q ss_pred hhhhhccCceEEEECCCCcEEEEeCCCC--eeeeHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHH
Q 047555 190 VDDESKQVSYRVVRDENGNVKLDCPAIG--KQFAAEEISAQVLRKLVDDASKFLNDKITKAVVTVPAYFNDSQRTATKDA 267 (593)
Q Consensus 190 ~~~~~~~~~~~v~~~~~g~~~i~~~~~~--~~~~~~~l~~~~L~~l~~~a~~~l~~~~~~~viTVPa~~~~~~r~~l~~A 267 (593)
++.+.+.+||.++...+|.+.+.+...+ +.++|+++++++|++|++.++.+++..+.++|||||++|++.||+++++|
T Consensus 81 v~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~A 160 (675)
T 3d2f_A 81 FEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADA 160 (675)
T ss_dssp HHHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHH
Confidence 6778889999999888898887665434 57999999999999999999999998899999999999999999999999
Q ss_pred HHHcCCceEEEechhHHHHHHhcccc-------CCCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHHHHH
Q 047555 268 GRIAGLEVLRIINEPTAASLAYGFER-------KNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKR 340 (593)
Q Consensus 268 a~~AGl~~v~li~Ep~AAal~~~~~~-------~~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~id~~ 340 (593)
++.||++++++++||+|||++|+... ..+..+||||+||||+|++++++.++.++++++.++..+||.+||+.
T Consensus 161 a~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~ 240 (675)
T 3d2f_A 161 ARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLA 240 (675)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHH
T ss_pred HHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHH
Confidence 99999999999999999999998754 34688999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhCCCCcCCHHHHHHHHHHHHHHhhhcCCCceeeEEeccccccCCCCceeEEEecHHHHHHHHHHHHHH
Q 047555 341 VVDWLAENFKRDEGVVLLNDKQALQRLTEAAEKAKMELSSLTQANISLPFITATADGPKHIETTLTRAKFEELCSDLLDR 420 (593)
Q Consensus 341 l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~ 420 (593)
|++|+.++|+++++.++..+++++.+|+.+||++|+.|+......++++.+..+ .++.+.|+|++|++++++++++
T Consensus 241 l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g----~~~~~~itr~~fe~l~~~l~~~ 316 (675)
T 3d2f_A 241 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMND----VDVSSQLSREELEELVKPLLER 316 (675)
T ss_dssp HHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSS----CCEEEEEEHHHHHHHTHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccC----ceEEEEEeHHHHHHHHHHHHHH
Confidence 999999999999998888999999999999999999999888888887754332 3578999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhcCC--CCceEEEe
Q 047555 421 LKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLAGD--VSDIVLLD 498 (593)
Q Consensus 421 i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~~~--~~~~~~~~ 498 (593)
+.++++++|+++++...+|+.|+||||+|++|+|++.|++.||.++....||++|||+|||++|+.+++. ++++.+.|
T Consensus 317 i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~~~~l~D 396 (675)
T 3d2f_A 317 VTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFED 396 (675)
T ss_dssp TTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCCCCCCEEEE
T ss_pred HHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCcccceEEEe
Confidence 9999999999999988899999999999999999999999999888889999999999999999999884 67899999
Q ss_pred cccccceEEeeCC----EEEEeecCCCccCCeeEEEEEecCCCceeEEEEEEecCccccc-CCceeeEEEEeCCCCCCCC
Q 047555 499 VTPLSIGLETLGG----VMTKIIPRNTTLPTSKSEVFSTAGDGQTSVEINVLQGEREFVR-DNKSLGSFRLDGIPPAPRG 573 (593)
Q Consensus 499 ~~~~s~gi~~~~~----~~~~li~~g~~~P~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~-~~~~lg~~~l~~i~~~~~g 573 (593)
++|++||+++.++ .+.+||++|+++|++++++|++..+++ +.+. |+|++.++. +|..||+|.|+|+|+.|+|
T Consensus 397 v~p~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~~--~~~~-~~ge~~~~~~~n~~lg~f~l~gi~~~~~g 473 (675)
T 3d2f_A 397 IHPYSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFS--MAAS-YTDITQLPPNTPEQIANWEITGVQLPEGQ 473 (675)
T ss_dssp EECSCEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCEE--EEEE-ESCGGGSCTTCCSEEEEEEEECCCCCSSC
T ss_pred eeecceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCce--EEEE-EcCCcccccccCceeeEEEecCcCCCCCC
Confidence 9999999999876 499999999999999999999876543 3332 779988887 9999999999999999999
Q ss_pred cC-eEEEEEEECCCceEEEEc
Q 047555 574 VP-QIEVKFDIDANGILSVTA 593 (593)
Q Consensus 574 ~~-~i~v~f~~d~~g~l~v~a 593 (593)
.+ +|+|+|++|.||+|+|+|
T Consensus 474 ~~~~i~v~f~id~~Gil~V~a 494 (675)
T 3d2f_A 474 DSVPVKLKLRCDPSGLHTIEE 494 (675)
T ss_dssp SCEEEEEEEEECTTSCEEEEE
T ss_pred CcceEEEEEEEcCCCcEEEEE
Confidence 74 999999999999999986
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=9.7e-78 Score=658.11 Aligned_cols=456 Identities=65% Similarity=1.026 Sum_probs=427.3
Q ss_pred CeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEEeCCcEEecHHHHHhhhhCCCchhhhhhhhhCCCCchhh
Q 047555 112 EKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVD 191 (593)
Q Consensus 112 ~~vVGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~V~~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~~lg~~~~~~~ 191 (593)
+.+||||||||||+||++.+|.++++.|+.|.+++||+|+| .+++++||++|+.+...+| ++++++|+++|+++.
T Consensus 2 ~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~-~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~--- 76 (509)
T 2v7y_A 2 SKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAF-KNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK--- 76 (509)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEE-SSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC---
T ss_pred CCEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEE-CCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE---
Confidence 46999999999999999999999999999999999999999 5678999999999988999 999999999998531
Q ss_pred hhhccCceEEEECCCCcEEEEeCCCCeeeeHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHHHHHc
Q 047555 192 DESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLNDKITKAVVTVPAYFNDSQRTATKDAGRIA 271 (593)
Q Consensus 192 ~~~~~~~~~v~~~~~g~~~i~~~~~~~~~~~~~l~~~~L~~l~~~a~~~l~~~~~~~viTVPa~~~~~~r~~l~~Aa~~A 271 (593)
+.+ .+..++++++.+++|++|++.++.+++..+.++|||||++|++.||+++++|++.|
T Consensus 77 -------------------~~~--~g~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~~A 135 (509)
T 2v7y_A 77 -------------------VEI--EGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIA 135 (509)
T ss_dssp -------------------EEE--TTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHT
T ss_pred -------------------EEE--CCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHc
Confidence 111 25678999999999999999999999988899999999999999999999999999
Q ss_pred CCceEEEechhHHHHHHhccccCCCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHHHHHHHHHHHHHhhh
Q 047555 272 GLEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAENFKR 351 (593)
Q Consensus 272 Gl~~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~id~~l~~~l~~~~~~ 351 (593)
|++++.+++||+|||++|+.+.+.+..+||||+||||+|++++++.++.+++++..++..+||.+||+.|++++.++|++
T Consensus 136 Gl~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~ 215 (509)
T 2v7y_A 136 GLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQ 215 (509)
T ss_dssp TCEEEEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEecCHHHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998877788999999999999999999998999999999999999999999999999999999
Q ss_pred hhCCCCcCCHHHHHHHHHHHHHHhhhcCCCceeeEEeccccccCCCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047555 352 DEGVVLLNDKQALQRLTEAAEKAKMELSSLTQANISLPFITATADGPKHIETTLTRAKFEELCSDLLDRLKKPVETALRD 431 (593)
Q Consensus 352 ~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~ 431 (593)
+++.++..++..+.+|+++||++|+.|+......+.++.+..+.+|+.++.+.|+|++|+++++|+++++.++++++|++
T Consensus 216 ~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~ 295 (509)
T 2v7y_A 216 EHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQD 295 (509)
T ss_dssp HHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHHHHHH
T ss_pred HhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888999999999999999999999888888888765544444567789999999999999999999999999999
Q ss_pred cCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhcCCCCceEEEecccccceEEeeCC
Q 047555 432 AKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLAGDVSDIVLLDVTPLSIGLETLGG 511 (593)
Q Consensus 432 ~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~~~~~~~~~~~~~~~s~gi~~~~~ 511 (593)
+++...+|+.|+|+||+|++|+|+++|++.|+.++....||++|||+|||++|+.+++..+++++.|++|++||+++.++
T Consensus 296 a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~~~~~~~~~dv~p~slgi~~~~~ 375 (509)
T 2v7y_A 296 AGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGEVKDVVLLDVTPLSLGIETMGG 375 (509)
T ss_dssp HTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHHHTCCCCCCCCCBCSSEEEEEETTT
T ss_pred cCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHhcCCccCceEEEeeccccceeecCC
Confidence 99888889999999999999999999999999888899999999999999999999988888999999999999999999
Q ss_pred EEEEeecCCCccCCeeEEEEEecCCCceeEEEEEEecCcccccCCceeeEEEEeCCCCCCCCcCeEEEEEEECCCceEEE
Q 047555 512 VMTKIIPRNTTLPTSKSEVFSTAGDGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSV 591 (593)
Q Consensus 512 ~~~~li~~g~~~P~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~~d~~g~l~v 591 (593)
.|.+||++|+++|+++++.|++..|+|+.+.|.||||++.+..+|+.||+|.|+++|+.|+|.++|+|+|++|.||+|+|
T Consensus 376 ~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v 455 (509)
T 2v7y_A 376 VFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDANGIVHV 455 (509)
T ss_dssp EEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEEECTTSCEEE
T ss_pred ceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEEEEEEEcCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ec
Q 047555 592 TA 593 (593)
Q Consensus 592 ~a 593 (593)
+|
T Consensus 456 ~a 457 (509)
T 2v7y_A 456 RA 457 (509)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=3.9e-60 Score=505.64 Aligned_cols=374 Identities=53% Similarity=0.816 Sum_probs=343.8
Q ss_pred CCCeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEEeCCcEEecHHHHHhhhhCCCchhhhhhhhhCCCCc-
Q 047555 110 VNEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMS- 188 (593)
Q Consensus 110 ~~~~vVGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~V~~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~~lg~~~~- 188 (593)
..+.+||||||||||+||++.+|.++++.++.|++++||+|+|.++ ++++|.+|+.+...+|.++++++|+++|+.++
T Consensus 21 ~~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~-~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~ 99 (404)
T 3i33_A 21 QSMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFED 99 (404)
T ss_dssp --CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSS-CEEETHHHHHTTTTCSTTEECCGGGTTTCCTTS
T ss_pred ccCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCC-CEEecHHHHHhhHhChhhhHHHHHHHhCCCCCc
Confidence 3567999999999999999999999999999999999999999866 89999999999999999999999999999987
Q ss_pred -hhhhhhccCceEEEECCCCcEEEEeCCCC--eeeeHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHH
Q 047555 189 -EVDDESKQVSYRVVRDENGNVKLDCPAIG--KQFAAEEISAQVLRKLVDDASKFLNDKITKAVVTVPAYFNDSQRTATK 265 (593)
Q Consensus 189 -~~~~~~~~~~~~v~~~~~g~~~i~~~~~~--~~~~~~~l~~~~L~~l~~~a~~~l~~~~~~~viTVPa~~~~~~r~~l~ 265 (593)
.++.+.+.|||.+.. .++...+.+...+ ..++++++++++|++|++.++.+++..+.++|||||++|++.||++|+
T Consensus 100 ~~~~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~ 178 (404)
T 3i33_A 100 ATVQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATK 178 (404)
T ss_dssp HHHHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHH
T ss_pred HHHHHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHH
Confidence 466778899999886 5666666554444 679999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCceEEEechhHHHHHHhccccC----CCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHHHHHH
Q 047555 266 DAGRIAGLEVLRIINEPTAASLAYGFERK----NNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRV 341 (593)
Q Consensus 266 ~Aa~~AGl~~v~li~Ep~AAal~~~~~~~----~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~id~~l 341 (593)
+|++.||++.+.+++||+|||++|+.... .+..++|||+||||+|++++++.++.+++++..++..+||.+||+.|
T Consensus 179 ~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l 258 (404)
T 3i33_A 179 DAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 258 (404)
T ss_dssp HHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred HHHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHH
Confidence 99999999999999999999999988765 67899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhCCCCcCCHHHHHHHHHHHHHHhhhcCCCceeeEEeccccccCCCCceeEEEecHHHHHHHHHHHHHHH
Q 047555 342 VDWLAENFKRDEGVVLLNDKQALQRLTEAAEKAKMELSSLTQANISLPFITATADGPKHIETTLTRAKFEELCSDLLDRL 421 (593)
Q Consensus 342 ~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~i 421 (593)
.+++.++++.+++.++..+++.+.+|+++||++|+.|+......+.++.... ..++.+.|+|++|+++++++++++
T Consensus 259 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~----g~~~~~~i~r~~~~~~~~~~~~~i 334 (404)
T 3i33_A 259 VSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE----GVDFYTSITRARFEELNADLFRGT 334 (404)
T ss_dssp HHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEET----TEEEEEEEEHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccC----CceeEEEEcHHHHHHHHHHHHHHH
Confidence 9999999999999888899999999999999999999999888887775433 245789999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHh-CCCCCCCCCChhHHHhHHHHHhhhhcC
Q 047555 422 KKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMT-GKDPNVTVNPDEVVALGAAVQGGVLAG 489 (593)
Q Consensus 422 ~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~-g~~v~~~~~p~~aVA~GAal~a~~l~~ 489 (593)
.+.|+++|+++++...+|+.|+|+||+|++|+|++.|++.| +.++....||++|||+|||++|+.+++
T Consensus 335 ~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 335 LEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 99999999999988889999999999999999999999999 788888999999999999999999875
No 7
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=8.5e-60 Score=499.47 Aligned_cols=375 Identities=57% Similarity=0.935 Sum_probs=341.6
Q ss_pred CeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEEeCCcEEecHHHHHhhhhCCCchhhhhhhhhCCCCc--h
Q 047555 112 EKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMS--E 189 (593)
Q Consensus 112 ~~vVGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~V~~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~~lg~~~~--~ 189 (593)
+.+||||||||||+||++.+|.++++.|++|.+++||+|+|+++++++||++|+.+...+|+++++++|++||+.++ +
T Consensus 2 ~~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 81 (383)
T 1dkg_D 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (383)
T ss_dssp -CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHH
T ss_pred CcEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHH
Confidence 46899999999999999999999999999999999999999877889999999999999999999999999999875 4
Q ss_pred hhhhhccCceEEEECCCCcEEEEeCCCCeeeeHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHHHH
Q 047555 190 VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLNDKITKAVVTVPAYFNDSQRTATKDAGR 269 (593)
Q Consensus 190 ~~~~~~~~~~~v~~~~~g~~~i~~~~~~~~~~~~~l~~~~L~~l~~~a~~~l~~~~~~~viTVPa~~~~~~r~~l~~Aa~ 269 (593)
++.+.+.+||.++.+.++...+.++ ++.++++++++++|+++++.++.+++..+.++|+|||++|++.||+++++|++
T Consensus 82 ~~~~~~~~p~~~~~~~~~~~~~~~~--g~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~ 159 (383)
T 1dkg_D 82 VQRDVSIMPFKIIAADNGDAWVEVK--GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGR 159 (383)
T ss_dssp HHHHTTTCSSEEEECSSSBEEEEET--TEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEcCCCcEEEEEC--CEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 6666778999998888888888774 67899999999999999999999998888899999999999999999999999
Q ss_pred HcCCceEEEechhHHHHHHhccccC-CCceEEEEeeCCceEEEEEEEEc----CCEEEEEEecCCCCccHHHHHHHHHHH
Q 047555 270 IAGLEVLRIINEPTAASLAYGFERK-NNETILVFDLGGGTFDVSVLEVG----DGVFEVLSTSGDTHLGGDDFDKRVVDW 344 (593)
Q Consensus 270 ~AGl~~v~li~Ep~AAal~~~~~~~-~~~~vlVvD~GggT~Dvsv~~~~----~~~~~vl~~~~~~~lGG~~id~~l~~~ 344 (593)
.||++.+.+++||+|||++|+.+.. .+..++|||+||||+|+++++.+ ++.+++++..++..+||.+||+.|.++
T Consensus 160 ~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~ 239 (383)
T 1dkg_D 160 IAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINY 239 (383)
T ss_dssp HTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHH
T ss_pred HcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999987754 57899999999999999999998 567888888888999999999999999
Q ss_pred HHHHhhhhhCCCCcCCHHHHHHHHHHHHHHhhhcCCCceeeEEeccccccCCCCceeEEEecHHHHHHHHHHHHHHHHHH
Q 047555 345 LAENFKRDEGVVLLNDKQALQRLTEAAEKAKMELSSLTQANISLPFITATADGPKHIETTLTRAKFEELCSDLLDRLKKP 424 (593)
Q Consensus 345 l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~ 424 (593)
+.++++.+++.++..++..+.+|++.||++|+.|+......+.++.+....+|+.++.+.|+|++|+++++|+++++.+.
T Consensus 240 l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~~ 319 (383)
T 1dkg_D 240 LVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEL 319 (383)
T ss_dssp HHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHHH
Confidence 99999988888888889999999999999999999988888887765543334345678999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhc
Q 047555 425 VETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLA 488 (593)
Q Consensus 425 i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~ 488 (593)
++++|+++++...+++.|+|+||+|++|+|+++|++.|+.++....||+++||+||+++|+.++
T Consensus 320 i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 320 LKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 9999999998878899999999999999999999999998888899999999999999998763
No 8
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=1.8e-58 Score=491.02 Aligned_cols=372 Identities=51% Similarity=0.807 Sum_probs=342.3
Q ss_pred CCeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEEeCCcEEecHHHHHhhhhCCCchhhhhhhhhCCCCc--
Q 047555 111 NEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMS-- 188 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~V~~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~~lg~~~~-- 188 (593)
+..+||||||||||+||++.+|.++++.++.|++++||+|+|.++ ++++|++|+.+...+|.++++++|+++|++++
T Consensus 17 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~-~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 95 (394)
T 3qfu_A 17 YGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDD-ERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDR 95 (394)
T ss_dssp CCSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSS-CEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCH
T ss_pred CCCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCC-cEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcH
Confidence 467899999999999999999999999999999999999999865 89999999999999999999999999999877
Q ss_pred hhhhhhccCceEEEECCCCcEEEEeCCCC--eeeeHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHH
Q 047555 189 EVDDESKQVSYRVVRDENGNVKLDCPAIG--KQFAAEEISAQVLRKLVDDASKFLNDKITKAVVTVPAYFNDSQRTATKD 266 (593)
Q Consensus 189 ~~~~~~~~~~~~v~~~~~g~~~i~~~~~~--~~~~~~~l~~~~L~~l~~~a~~~l~~~~~~~viTVPa~~~~~~r~~l~~ 266 (593)
.++.+.+.+||.++ +.++...+.+...+ ..++++++++++|++|++.++.+++..+.++|||||++|++.+|+++++
T Consensus 96 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~ 174 (394)
T 3qfu_A 96 SVQKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKD 174 (394)
T ss_dssp HHHHHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHH
Confidence 56778889999988 56676666554433 6799999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCceEEEechhHHHHHHhccccC-CCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHHHHHHHHHH
Q 047555 267 AGRIAGLEVLRIINEPTAASLAYGFERK-NNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWL 345 (593)
Q Consensus 267 Aa~~AGl~~v~li~Ep~AAal~~~~~~~-~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~id~~l~~~l 345 (593)
|++.||++.+.+++||+|||++|+.... .+..++|||+||||+|++++++.++.+++++..++..+||.+||+.|.+++
T Consensus 175 a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l 254 (394)
T 3qfu_A 175 AGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQL 254 (394)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred HHHHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHH
Confidence 9999999999999999999999976543 578999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhCCCCcCCHHHHHHHHHHHHHHhhhcCCCceeeEEeccccccCCCCceeEEEecHHHHHHHHHHHHHHHHHHH
Q 047555 346 AENFKRDEGVVLLNDKQALQRLTEAAEKAKMELSSLTQANISLPFITATADGPKHIETTLTRAKFEELCSDLLDRLKKPV 425 (593)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i 425 (593)
.++++.+++.++..+++.+.+|+++||++|+.|+......+.++.+.. ..++.+.++|++|+++++++++++.+.|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~----~~~~~~~i~r~~~~~~~~~~~~~i~~~i 330 (394)
T 3qfu_A 255 IKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVD----GIDLSETLTRAKFEELNLDLFKKTLKPV 330 (394)
T ss_dssp HHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEET----TEEEEEEEEHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccC----CceeEEEEEHHHHHHHHHHHHHHHHHHH
Confidence 999999999888899999999999999999999999888887765432 2357899999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHh-CCCCCCCCCChhHHHhHHHHHhhhhc
Q 047555 426 ETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMT-GKDPNVTVNPDEVVALGAAVQGGVLA 488 (593)
Q Consensus 426 ~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~-g~~v~~~~~p~~aVA~GAal~a~~l~ 488 (593)
+++|+++++...+++.|+|+||+|++|+|++.|++.| +.++....||+++||.|||++|+.++
T Consensus 331 ~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 331 EKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 9999999988888999999999999999999999999 78888899999999999999998764
No 9
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=1.4e-58 Score=494.37 Aligned_cols=372 Identities=31% Similarity=0.498 Sum_probs=334.0
Q ss_pred CeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEEeCCcEEecHHHHHhhhhCCCchhhhhhhhhCCCCchhh
Q 047555 112 EKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVD 191 (593)
Q Consensus 112 ~~vVGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~V~~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~~lg~~~~~~~ 191 (593)
+.+||||||||||+||++.++.++++.++.|.+++||+|+|.+ +.+++|.+|..+...+|+++++++|+++|+.+++..
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~-~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~ 91 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVD-GDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVD 91 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEET-TEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECC-CcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchh
Confidence 5899999999999999999999999999999999999999984 589999999999999999999999999999987544
Q ss_pred hhhccCceEEEECCCCcEEEEeCC------CCeeeeHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHH
Q 047555 192 DESKQVSYRVVRDENGNVKLDCPA------IGKQFAAEEISAQVLRKLVDDASKFLNDKITKAVVTVPAYFNDSQRTATK 265 (593)
Q Consensus 192 ~~~~~~~~~v~~~~~g~~~i~~~~------~~~~~~~~~l~~~~L~~l~~~a~~~l~~~~~~~viTVPa~~~~~~r~~l~ 265 (593)
.....+++.+. ..+|.+.+.+.. .+..++++++++++|++|+++++.+++..+.++|||||++|++.||++|+
T Consensus 92 ~~~~~~~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~ 170 (409)
T 4gni_A 92 PTHNHASAHPQ-EAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAALI 170 (409)
T ss_dssp CGGGTTSCCCE-EETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHH
T ss_pred hhhhcccccee-cCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHH
Confidence 33334444443 356777776654 34679999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCceEEEechhHHHHHHhcccc---CCCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHHHHHHH
Q 047555 266 DAGRIAGLEVLRIINEPTAASLAYGFER---KNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVV 342 (593)
Q Consensus 266 ~Aa~~AGl~~v~li~Ep~AAal~~~~~~---~~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~id~~l~ 342 (593)
+|++.||++++.+++||+|||++|+... ..+..++|||+||||+|++++++.++.+++++..++..+||.+||+.|.
T Consensus 171 ~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~ 250 (409)
T 4gni_A 171 AAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLI 250 (409)
T ss_dssp HHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHH
T ss_pred HHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHH
Confidence 9999999999999999999999999874 5688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhC--CCCcCCHHHHHHHHHHHHHHhhhcCCCceeeEEeccccccCCCCceeEEEecHHHHHHHHHHHHHH
Q 047555 343 DWLAENFKRDEG--VVLLNDKQALQRLTEAAEKAKMELSSLTQANISLPFITATADGPKHIETTLTRAKFEELCSDLLDR 420 (593)
Q Consensus 343 ~~l~~~~~~~~~--~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~ 420 (593)
+++.++|..+++ .+...+++.+.+|+.+||++|+.|+......+.++.+.. ..++.+.|+|++|++++++++++
T Consensus 251 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~----~~~~~~~itr~~~~~~~~~~~~~ 326 (409)
T 4gni_A 251 DHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLID----GLDFASTINRLRYETIARTVFEG 326 (409)
T ss_dssp HHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEET----TEEEEEEEEHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccC----CcceEEEeeHHHHHHHHHHHHHH
Confidence 999999998887 777889999999999999999999998888888875543 24578999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCCC--------CCCCCChhHHHhHHHHHhhhhcC
Q 047555 421 LKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKDP--------NVTVNPDEVVALGAAVQGGVLAG 489 (593)
Q Consensus 421 i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v--------~~~~~p~~aVA~GAal~a~~l~~ 489 (593)
+.++|+++|+++++...+|+.|+|+||+|++|+|++.|++.|+.++ ....||++|||+|||++|+....
T Consensus 327 i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~ 403 (409)
T 4gni_A 327 FNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQE 403 (409)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhh
Confidence 9999999999999888889999999999999999999999998653 57899999999999999987653
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=2.1e-41 Score=353.08 Aligned_cols=312 Identities=27% Similarity=0.378 Sum_probs=238.5
Q ss_pred CeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEEeC-CcE-EecHHHHHhhhhCCCchhhhhhhhhCCCCch
Q 047555 112 EKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKI-GDR-LVGQIAKRQAVVNPENTFFSVKRFIGRKMSE 189 (593)
Q Consensus 112 ~~vVGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~V~~~~~-~~~-~~G~~A~~~~~~~~~~~i~~~K~~lg~~~~~ 189 (593)
+.+|||||||+||++++..++ .++ + +||+|+|+++ ++. ++|++|+.....+|.+...
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~--~~~-~------~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~------------ 61 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKG--IVV-N------EPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKA------------ 61 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTE--EEE-E------EESCEEEETTTCCEEEESHHHHTTTTCCCTTEEE------------
T ss_pred CceEEEEcCcCcEEEEECCCC--EEE-e------eCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEE------------
Confidence 468999999999999875433 333 2 7999999876 554 7999997765555554321
Q ss_pred hhhhhccCceEEEECCCCcEEEEeCCCCeeeeHHHHHHHHHHHHHHHHHH--HhCCCcCcEEEEeCCCCCHHHHHHHHHH
Q 047555 190 VDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASK--FLNDKITKAVVTVPAYFNDSQRTATKDA 267 (593)
Q Consensus 190 ~~~~~~~~~~~v~~~~~g~~~i~~~~~~~~~~~~~l~~~~L~~l~~~a~~--~l~~~~~~~viTVPa~~~~~~r~~l~~A 267 (593)
.+|++ +| .+...+....+++++++.+.. .++ ..++|||||++|++.||+++++|
T Consensus 62 ------~~p~~-----~g-----------~i~~~~~~~~i~~~~l~~~~~~~~~~--~~~~vitvP~~~~~~~r~~~~~a 117 (344)
T 1jce_A 62 ------IRPMR-----DG-----------VIADYTVALVMLRYFINKAKGGMNLF--KPRVVIGVPIGITDVERRAILDA 117 (344)
T ss_dssp ------ECCEE-----TT-----------EESSHHHHHHHHHHHHHHHHTSCCSC--CCEEEEEECTTCCHHHHHHHHHH
T ss_pred ------EecCC-----CC-----------eeCChHHHHHHHHHHHHHHhhccccC--CCeEEEEECCCCCHHHHHHHHHH
Confidence 01111 11 122334445555555544433 123 36899999999999999999999
Q ss_pred HHHcCCceEEEechhHHHHHHhccccCCCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHHHHHHHHHHHH
Q 047555 268 GRIAGLEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAE 347 (593)
Q Consensus 268 a~~AGl~~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~id~~l~~~l~~ 347 (593)
++.||++.+.+++||+|||++|+.+...+..++|||+||||||+++++.+... ..++..+||.+||+.|.+++.+
T Consensus 118 ~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggttdvsv~~~~~~~-----~~~~~~lGG~~id~~l~~~l~~ 192 (344)
T 1jce_A 118 GLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIV-----TWESIRIAGDEMDEAIVQYVRE 192 (344)
T ss_dssp HHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSCEEEEEEETTEEE-----EEEEESCSHHHHHHHHHHHHHH
T ss_pred HHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEeCCCeEEEEEEEcCCEE-----eeCCCCccChhHHHHHHHHHHH
Confidence 99999999999999999999999877778899999999999999999976422 2456789999999999999988
Q ss_pred HhhhhhCCCCcCCHHHHHHHHHHHHHHhhhcCCCce------eeEEeccccccCCCCceeEEEecHHHHHHHHHHHHHHH
Q 047555 348 NFKRDEGVVLLNDKQALQRLTEAAEKAKMELSSLTQ------ANISLPFITATADGPKHIETTLTRAKFEELCSDLLDRL 421 (593)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~------~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~i 421 (593)
+++.... .+.||++|+.++.... ..+.++.. +..+..+..+.|+|++|+++++|.++++
T Consensus 193 ~~~~~~~-------------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~i~~~~~~~~~~~~~~~i 257 (344)
T 1jce_A 193 TYRVAIG-------------ERTAERVKIEIGNVFPSKENDELETTVSGI--DLSTGLPRKLTLKGGEVREALRSVVVAI 257 (344)
T ss_dssp HHCEECC-------------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEE--ETTTTEEEEEEEEHHHHHHHTHHHHHHH
T ss_pred HhCcccC-------------HHHHHHHHHHHhccCccccCCcceEEEecc--ccCCCCceeEEEeHHHHHHHHHHHHHHH
Confidence 7643221 5689999999986532 23444321 1112234678999999999999999999
Q ss_pred HHHHHHHHHHcCCC--CCCC-CeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhc
Q 047555 422 KKPVETALRDAKLS--FNDL-DEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLA 488 (593)
Q Consensus 422 ~~~i~~~l~~~~~~--~~~i-~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~ 488 (593)
.+.|+++|++++.. ...+ +.|+|+||+|++|+|+++|++.|+.++....||+++||+||++++..++
T Consensus 258 ~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 258 VESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhChH
Confidence 99999999987532 1223 6899999999999999999999998888889999999999999988654
No 11
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.95 E-value=1.7e-27 Score=250.70 Aligned_cols=299 Identities=15% Similarity=0.157 Sum_probs=204.9
Q ss_pred CeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEEeC---------CcEEecHHHHHhhhhCCCchhhhhhhh
Q 047555 112 EKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKI---------GDRLVGQIAKRQAVVNPENTFFSVKRF 182 (593)
Q Consensus 112 ~~vVGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~V~~~~~---------~~~~~G~~A~~~~~~~~~~~i~~~K~~ 182 (593)
...|+||+||++++++++.++.|.++ +||+++...+ ...++|++|.... .
T Consensus 5 ~~~ivID~Gs~~~k~G~~~~~~p~~~--------~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~--------- 63 (375)
T 2fxu_A 5 TTALVCDNGSGLVKAGFAGDDAPRAV--------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----G--------- 63 (375)
T ss_dssp CCCEEEEECSSEEEEEETTCSSCSEE--------EECCEEEECTTTC-------CCEEHHHHHHHT----T---------
T ss_pred CceEEEECCCCeEEEEECCCCCCcee--------eccccccccccccccCCCCCCeEechhHhhcC----c---------
Confidence 36789999999999999877766644 4777776543 2457888875431 0
Q ss_pred hCCCCchhhhhhccCceEEEECCCCcEEEEeCCCCeeeeHHHHHHHHHHHHHHHHHHHhCCC--cCcEEEEeCCCCCHHH
Q 047555 183 IGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLNDK--ITKAVVTVPAYFNDSQ 260 (593)
Q Consensus 183 lg~~~~~~~~~~~~~~~~v~~~~~g~~~i~~~~~~~~~~~~~l~~~~L~~l~~~a~~~l~~~--~~~~viTVPa~~~~~~ 260 (593)
...+..+.....+...+.+..+|++++. +.++.. ...+++|+|+.++..+
T Consensus 64 -------------------------~~~~~~Pi~~G~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~ 115 (375)
T 2fxu_A 64 -------------------------ILTLKYPIEHGIITNWDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKAN 115 (375)
T ss_dssp -------------------------SEEEECSEETTEECCHHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHH
T ss_pred -------------------------ccceeccccCCcccCHHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHH
Confidence 0111112223344556677777777763 233322 2459999999999999
Q ss_pred HHHHHHH-HHHcCCceEEEechhHHHHHHhccccCCCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHHHH
Q 047555 261 RTATKDA-GRIAGLEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDK 339 (593)
Q Consensus 261 r~~l~~A-a~~AGl~~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~id~ 339 (593)
|+++.++ ++.+|++.+.+++||.||+++++. ...+|||+|+||||++.+.. +. .+........+||++||+
T Consensus 116 r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~-----~~~lVvDiG~gtt~v~~v~~--G~-~~~~~~~~~~~GG~~lt~ 187 (375)
T 2fxu_A 116 REKMTQIMFETFNVPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVTHNVPIYE--GY-ALPHAIMRLDLAGRDLTD 187 (375)
T ss_dssp HHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC-----SSEEEEEECSSCEEEEEEET--TE-ECGGGCEEESCCHHHHHH
T ss_pred HHHHHHHHHHhcCcceEEEccchheeeeecCC-----CeEEEEEcCCCceEEeEeEC--CE-EeccceEEeccCHHHHHH
Confidence 9988876 588899999999999999999985 36799999999999987753 32 222223457899999999
Q ss_pred HHHHHHHHHhhhhhCCCCcCCHHHHHHHHHHHHHHhhhcCC----------------CceeeEEeccccccCCCCceeEE
Q 047555 340 RVVDWLAENFKRDEGVVLLNDKQALQRLTEAAEKAKMELSS----------------LTQANISLPFITATADGPKHIET 403 (593)
Q Consensus 340 ~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~----------------~~~~~i~i~~~~~~~~~~~~~~~ 403 (593)
.|.++|..+. ..+... .-.+.+|++|+.++. .....+.+| + ...+
T Consensus 188 ~l~~~l~~~~-----~~~~~~-----~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp------d---g~~i 248 (375)
T 2fxu_A 188 YLMKILTERG-----YSFVTT-----AEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP------D---GQVI 248 (375)
T ss_dssp HHHHHHHHHT-----CCCCSH-----HHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT------T---SCEE
T ss_pred HHHHHHHhcC-----CCCCcH-----HHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC------C---CCEE
Confidence 9999998751 111100 012345555555432 122233333 1 2357
Q ss_pred EecHHHH---HHHHHHH-----HHHHHHHHHHHHHHcCCC--CCCCCeEEEEeCCCChHhHHHHHHhHhC--------CC
Q 047555 404 TLTRAKF---EELCSDL-----LDRLKKPVETALRDAKLS--FNDLDEVILVGGSTRIPAVQELVKKMTG--------KD 465 (593)
Q Consensus 404 ~itr~~~---e~~~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~~g--------~~ 465 (593)
.+++++| |.+|+|. ...+.++|.+.+.++... ...++.|+|+||+|++|+++++|++.++ .+
T Consensus 249 ~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~ 328 (375)
T 2fxu_A 249 TIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIK 328 (375)
T ss_dssp EESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCC
T ss_pred EEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEE
Confidence 8888877 4455553 355778888888765321 2234779999999999999999999885 33
Q ss_pred CCCCCCChhHHHhHHHHHhhh
Q 047555 466 PNVTVNPDEVVALGAAVQGGV 486 (593)
Q Consensus 466 v~~~~~p~~aVA~GAal~a~~ 486 (593)
+....+|.+++++||+++|..
T Consensus 329 v~~~~~p~~~~w~G~si~a~l 349 (375)
T 2fxu_A 329 IIAPPERKYSVWIGGSILASL 349 (375)
T ss_dssp EECCTTTTSHHHHHHHHHHHC
T ss_pred EEcCCCCCccEEcchHHhhCc
Confidence 445679999999999999874
No 12
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.95 E-value=4.3e-26 Score=229.30 Aligned_cols=205 Identities=24% Similarity=0.369 Sum_probs=175.3
Q ss_pred eHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHHHHHcCCceEEEechhHHHHHHhccccCCCceEE
Q 047555 221 AAEEISAQVLRKLVDDASKFLNDKITKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFERKNNETIL 300 (593)
Q Consensus 221 ~~~~l~~~~L~~l~~~a~~~l~~~~~~~viTVPa~~~~~~r~~l~~Aa~~AGl~~v~li~Ep~AAal~~~~~~~~~~~vl 300 (593)
...+....+|+++++.+....+.....+++|+|+.|...+|+.++++++.+|++...++.||+|++++++.. ..+
T Consensus 68 ~d~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~-----~~~ 142 (272)
T 3h1q_A 68 VDYIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN-----DGI 142 (272)
T ss_dssp TTHHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS-----SEE
T ss_pred EcHHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC-----CEE
Confidence 345677888999998888887877888999999999999999999999999999999999999999998764 359
Q ss_pred EEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHHHHHHHHHHHHHhhhhhCCCCcCCHHHHHHHHHHHHHHhhhcCC
Q 047555 301 VFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAENFKRDEGVVLLNDKQALQRLTEAAEKAKMELSS 380 (593)
Q Consensus 301 VvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~ 380 (593)
|+|+||||+|++++..+ ... ......+||.+||+.+.+++.-. .+.+|++|+.++
T Consensus 143 viDiGggst~~~~~~~g--~~~---~~~~~~~Gg~~~~~~l~~~l~~~-------------------~~~ae~~k~~~~- 197 (272)
T 3h1q_A 143 VVDIGGGTTGIAVIEKG--KIT---ATFDEPTGGTHLSLVLAGSYKIP-------------------FEEAETIKKDFS- 197 (272)
T ss_dssp EEEECSSCEEEEEEETT--EEE---EECCBSCCHHHHHHHHHHHHTCC-------------------HHHHHHHHHSST-
T ss_pred EEEECCCcEEEEEEECC--EEE---EEecCCCcHHHHHHHHHHHhCCC-------------------HHHHHHHHHhcC-
Confidence 99999999999998743 221 34678999999999998876411 467889998865
Q ss_pred CceeeEEeccccccCCCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHh
Q 047555 381 LTQANISLPFITATADGPKHIETTLTRAKFEELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKK 460 (593)
Q Consensus 381 ~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~ 460 (593)
+++++++++.+.++++.+.+.+.++..+ +++.|+|+||++++|++++.|++
T Consensus 198 -------------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~ 248 (272)
T 3h1q_A 198 -------------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSR 248 (272)
T ss_dssp -------------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHH
T ss_pred -------------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHH
Confidence 4788999999999999999999988754 37789999999999999999999
Q ss_pred HhCCCCCCCCCChhHHHhHHHHHh
Q 047555 461 MTGKDPNVTVNPDEVVALGAAVQG 484 (593)
Q Consensus 461 ~~g~~v~~~~~p~~aVA~GAal~a 484 (593)
.|+.++..+.+|++++|+|||++|
T Consensus 249 ~l~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 249 FLGKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp HHSSCCBCCSSGGGHHHHHHHTTC
T ss_pred HhCCCccccCChHHHHHHHHHhcC
Confidence 999999999999999999999874
No 13
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.95 E-value=6e-27 Score=250.25 Aligned_cols=308 Identities=16% Similarity=0.174 Sum_probs=208.2
Q ss_pred CCeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEEeCC-----------------cEEecHHHHHhhhhCCC
Q 047555 111 NEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIG-----------------DRLVGQIAKRQAVVNPE 173 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~V~~~~~~-----------------~~~~G~~A~~~~~~~~~ 173 (593)
....|+||+||++++++++.++.|.++ +||+|+...+. ..++|++|... +
T Consensus 4 ~~~~ivID~Gs~~~k~G~~~~~~p~~~--------~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~----~- 70 (418)
T 1k8k_A 4 RLPACVVDCGTGYTKLGYAGNTEPQFI--------IPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEK----P- 70 (418)
T ss_dssp CSCCEEEEECSSEEEEEETTCSSCSEE--------EESCEEECC-----------CCCTTGGGCEEEGGGGTSC----T-
T ss_pred CCCeEEEECCCCeEEEeeCCCCCCCCc--------CCceEEEECcccccccccccccccccccCeEEChHHHhc----C-
Confidence 346789999999999999876666544 58888875431 14455554221 0
Q ss_pred chhhhhhhhhCCCCchhhhhhccCceEEEECCCCcEEEEeCCCCeeeeHHHHHHHHHHHHHHHHHHHhCCC--cCcEEEE
Q 047555 174 NTFFSVKRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLNDK--ITKAVVT 251 (593)
Q Consensus 174 ~~i~~~K~~lg~~~~~~~~~~~~~~~~v~~~~~g~~~i~~~~~~~~~~~~~l~~~~L~~l~~~a~~~l~~~--~~~~viT 251 (593)
...+..+.....+...+.+..+|++++. +.++.. ...+++|
T Consensus 71 ----------------------------------~~~~~~pi~~G~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit 113 (418)
T 1k8k_A 71 ----------------------------------TYATKWPIRHGIVEDWDLMERFMEQVIF---KYLRAEPEDHYFLLT 113 (418)
T ss_dssp ----------------------------------TSEEECCEETTEESCHHHHHHHHHHHHH---TTTCCCGGGCCEEEE
T ss_pred ----------------------------------CCEEeccccCCEECCHHHHHHHHHHHHH---hccCCCCCCCcEEEE
Confidence 0111222223334455666667776654 233322 3469999
Q ss_pred eCCCCCHHHHHHHHHHH-HHcCCceEEEechhHHHHHH-hc---cccCCCceEEEEeeCCceEEEEEEEEcCCEEEEEEe
Q 047555 252 VPAYFNDSQRTATKDAG-RIAGLEVLRIINEPTAASLA-YG---FERKNNETILVFDLGGGTFDVSVLEVGDGVFEVLST 326 (593)
Q Consensus 252 VPa~~~~~~r~~l~~Aa-~~AGl~~v~li~Ep~AAal~-~~---~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~ 326 (593)
+|+.|+..+|++|.+++ +.+|++.+.+++||.||+++ |. ...... ..+|||+|+||||++++.. +. .+...
T Consensus 114 ~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~-~glVvDiG~gtt~v~~v~~--G~-~~~~~ 189 (418)
T 1k8k_A 114 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTL-TGTVIDSGDGVTHVIPVAE--GY-VIGSC 189 (418)
T ss_dssp ECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCC-CEEEEEESSSCEEEEEEET--TE-ECGGG
T ss_pred eCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCC-eEEEEEcCCCceEEEEeEC--CE-Ecccc
Confidence 99999999999999998 88999999999999999988 32 111222 6799999999999999873 32 22222
Q ss_pred cCCCCccHHHHHHHHHHHHHHHhhhhhCCCCcCCHHHHHHHHHHHHHHhhhcCCCce-----------------eeEEec
Q 047555 327 SGDTHLGGDDFDKRVVDWLAENFKRDEGVVLLNDKQALQRLTEAAEKAKMELSSLTQ-----------------ANISLP 389 (593)
Q Consensus 327 ~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~-----------------~~i~i~ 389 (593)
.....+||++||+.|.++|.+++. ...... -.+.+|++|+.++.... ..+.++
T Consensus 190 ~~~~~lGG~~lt~~l~~~l~~~~~---~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~~lp 259 (418)
T 1k8k_A 190 IKHIPIAGRDITYFIQQLLRDREV---GIPPEQ-------SLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGI 259 (418)
T ss_dssp CEEESCSHHHHHHHHHHHHHTTCC---CCCGGG-------HHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEEEEE
T ss_pred eEEEeCcHHHHHHHHHHHHHhcCC---CCCCHH-------HHHHHHHHHHhhchhcccHHHHHHhhcccccccceeEECC
Confidence 355789999999999999986542 111111 13567778877764311 223333
Q ss_pred cccccCCCCceeEEEecHHHH---HHHHHHHH------HHHHHHHHHHHHHcCCC--CCCCCeEEEEeCCCChHhHHHHH
Q 047555 390 FITATADGPKHIETTLTRAKF---EELCSDLL------DRLKKPVETALRDAKLS--FNDLDEVILVGGSTRIPAVQELV 458 (593)
Q Consensus 390 ~~~~~~~~~~~~~~~itr~~~---e~~~~~~~------~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l 458 (593)
+........+.+++++| |.+|+|.+ ..+.+.|.+.|.++... ...++.|+|+||+|++|+++++|
T Consensus 260 ----d~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl 335 (418)
T 1k8k_A 260 ----NAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRL 335 (418)
T ss_dssp ----CTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHH
T ss_pred ----CCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHHH
Confidence 11122345788999998 55666542 56888999999886533 33457899999999999999999
Q ss_pred HhHhCC------------------------CCCCCCCChhHHHhHHHHHhhh
Q 047555 459 KKMTGK------------------------DPNVTVNPDEVVALGAAVQGGV 486 (593)
Q Consensus 459 ~~~~g~------------------------~v~~~~~p~~aVA~GAal~a~~ 486 (593)
++.++. ++..+.+|..++++||+++|..
T Consensus 336 ~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 336 QRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 876531 1223457889999999999874
No 14
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.94 E-value=8.8e-28 Score=249.68 Aligned_cols=226 Identities=17% Similarity=0.133 Sum_probs=164.2
Q ss_pred eeHHHHHHHHHHHHHHHHHHHhCCCcCcEE--EEeCCCCCHHHHHHHHHHHHHc--------C------CceEEEechhH
Q 047555 220 FAAEEISAQVLRKLVDDASKFLNDKITKAV--VTVPAYFNDSQRTATKDAGRIA--------G------LEVLRIINEPT 283 (593)
Q Consensus 220 ~~~~~l~~~~L~~l~~~a~~~l~~~~~~~v--iTVPa~~~~~~r~~l~~Aa~~A--------G------l~~v~li~Ep~ 283 (593)
+..++...+++..|...+....... .++| ++||+++++.||+++++++..+ | ++.+.+++||.
T Consensus 95 ~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~ 173 (346)
T 2fsj_A 95 LASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGV 173 (346)
T ss_dssp TTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTH
T ss_pred ccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHH
Confidence 3444455555555554332222223 4699 9999999999999999998775 4 36688999999
Q ss_pred HHHHHhccc--c-CCCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHHHHHHHHHHHHHhhhhhCCCCcCC
Q 047555 284 AASLAYGFE--R-KNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAENFKRDEGVVLLND 360 (593)
Q Consensus 284 AAal~~~~~--~-~~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~ 360 (593)
|||++|+.. . ++...++|||+||||||+++++++++. .+...+++..+||++|++.|.+++.++++... .+.
T Consensus 174 AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~g~~~--~i~-- 248 (346)
T 2fsj_A 174 GAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKETGFVV--PFD-- 248 (346)
T ss_dssp HHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHHHCCCC--CHH--
T ss_pred HHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHHhCCCc--CCC--
Confidence 999988322 1 234779999999999999999988776 45554677899999999999988877764300 110
Q ss_pred HHHHHHHHHHHHHHhhhcCCCceeeEEeccccccCCCCceeEEEecHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Q 047555 361 KQALQRLTEAAEKAKMELSSLTQANISLPFITATADGPKHIETTLTRAKF-EELCSDLLDRLKKPVETALRDAKLSFNDL 439 (593)
Q Consensus 361 ~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~-e~~~~~~~~~i~~~i~~~l~~~~~~~~~i 439 (593)
.+.+| .. ..+.+. + + .++++++ +++++++++++.+.+++.|++. ..++
T Consensus 249 -------~~~~e-------~~--~~~~~~-------g-~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i 297 (346)
T 2fsj_A 249 -------LAQEA-------LS--HPVMFR-------Q-K----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRV 297 (346)
T ss_dssp -------HHHHH-------TT--SCEEET-------T-E----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGE
T ss_pred -------HHHHh-------cC--CeEeEC-------C-c----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcc
Confidence 11222 00 112221 1 1 2458999 9999999999999999999876 3467
Q ss_pred CeEEEEeCCCChHhHHHHHHhHhCCCCCC---CCCChhHHHhHHHHHhh
Q 047555 440 DEVILVGGSTRIPAVQELVKKMTGKDPNV---TVNPDEVVALGAAVQGG 485 (593)
Q Consensus 440 ~~VvLvGG~s~~p~l~~~l~~~~g~~v~~---~~~p~~aVA~GAal~a~ 485 (593)
+.|+|+||++++ +++.|++.|+. +.. ..||++|+|+|+..++.
T Consensus 298 ~~IvL~GGga~l--l~~~l~~~~~~-~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 298 TSLIPVGGGSNL--IGDRFEEIAPG-TLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEEEEESTTHHH--HGGGGGGGSTT-CBCCCCTTTTTTHHHHHHHHHHH
T ss_pred cEEEEECCcHHH--HHHHHHHHCcC-cEEeccCCCcHHHHHHHHHHHHh
Confidence 899999999998 99999999973 344 78999999999998754
No 15
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.94 E-value=2.7e-25 Score=235.97 Aligned_cols=199 Identities=15% Similarity=0.126 Sum_probs=159.1
Q ss_pred HHHHHHHHHHHHHcCCceEEEechhHHHHHHhccccCCCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHH
Q 047555 258 DSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDF 337 (593)
Q Consensus 258 ~~~r~~l~~Aa~~AGl~~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~i 337 (593)
....+.+.+|++.||+++..++.||.|||++++.+...+..++|+|+||||||+++++. +.+.. .+...+||++|
T Consensus 167 ~~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~--g~~~~---~~~i~~GG~~i 241 (419)
T 4a2a_A 167 LKVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKN--GVPIK---ISYVPVGMKHV 241 (419)
T ss_dssp HHHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEET--TEEEE---EEEESCCHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEEC--CEEEE---EEecccHHHHH
Confidence 45678899999999999999999999999999877666678999999999999999983 33322 34578999999
Q ss_pred HHHHHHHHHHHhhhhhCCCCcCCHHHHHHHHHHHHHHhhhcCCC-----ceeeEEeccccccCCCCceeEEEecHHHHHH
Q 047555 338 DKRVVDWLAENFKRDEGVVLLNDKQALQRLTEAAEKAKMELSSL-----TQANISLPFITATADGPKHIETTLTRAKFEE 412 (593)
Q Consensus 338 d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~-----~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~ 412 (593)
|+.|.+.+.-. .+.||++|+.++.. ....+.++... + .....++++++++
T Consensus 242 t~dIa~~l~~~-------------------~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~----~--~~~~~is~~~l~~ 296 (419)
T 4a2a_A 242 IKDVSAVLDTS-------------------FEESERLIITHGNAVYNDLKEEEIQYRGLD----G--NTIKTTTAKKLSV 296 (419)
T ss_dssp HHHHHHHHTCC-------------------HHHHHHHHHHHCCSCCTTCCCCEEEEECTT----S--CSEEEEEHHHHHH
T ss_pred HHHHHHHHCCC-------------------HHHHHHHHHHhccCcccCCCCceEEEeecC----C--ccceEEcHHHHHH
Confidence 99998754321 67899999998752 33445555332 1 2457899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC------CCCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCC-----------------
Q 047555 413 LCSDLLDRLKKPVETALRDAKL------SFNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVT----------------- 469 (593)
Q Consensus 413 ~~~~~~~~i~~~i~~~l~~~~~------~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~----------------- 469 (593)
+++|.++++.+.+++.|+.++. ....+++|+|+||+|++|+|++.+++.|+.++...
T Consensus 297 ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p~~~~~~~~~~ 376 (419)
T 4a2a_A 297 IIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSIINADEVA 376 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSSCCCBTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCchhccCccccc
Confidence 9999999999999999999987 34567999999999999999999999998654321
Q ss_pred CCChhHHHhHHHHHhhh
Q 047555 470 VNPDEVVALGAAVQGGV 486 (593)
Q Consensus 470 ~~p~~aVA~GAal~a~~ 486 (593)
.+|..+++.|.++++..
T Consensus 377 ~~P~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 377 NDPSFAAAFGNVFAVSE 393 (419)
T ss_dssp TCGGGHHHHHTTCC---
T ss_pred CCchHHHHHHHHHHHhh
Confidence 48999999999998765
No 16
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.93 E-value=1.3e-26 Score=244.20 Aligned_cols=319 Identities=18% Similarity=0.242 Sum_probs=202.5
Q ss_pred CCeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEEeCCcEEecHHHHHhhhhCCCchhhhhhhhhCCCCchh
Q 047555 111 NEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKIGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEV 190 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~V~~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~~lg~~~~~~ 190 (593)
...++|||+||++++++...++.+.+. ..|...+|+... +...+.+++.+...+|+++++...
T Consensus 12 ~~~~vgiDiGt~~i~~~~~~~~~~~i~--~~g~~~~ps~~~-------------~~g~i~d~~~~~~~ik~~~~~~~~-- 74 (377)
T 2ych_A 12 RVEALGLEIGASALKLVEVSGNPPALK--ALASRPTPPGLL-------------MEGMVAEPAALAQEIKELLLEART-- 74 (377)
T ss_dssp CCCCEEEEECSSEEEEEEEETTTTEEE--EEEEEECCTTSE-------------ETTEESCHHHHHHHHHHHHHHHTC--
T ss_pred CCceEEEEeCCCeEEEEEEeCCceEEE--EEEeEECCCCcc-------------cCCCcCCHHHHHHHHHHHHHHcCC--
Confidence 346899999999999998876665542 123333344221 122334566677788888775110
Q ss_pred hhhhccCceEEEECCCCcEEE-EeCCCCeeeeHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCC------------
Q 047555 191 DDESKQVSYRVVRDENGNVKL-DCPAIGKQFAAEEISAQVLRKLVDDASKFLNDKITKAVVTVPAYFN------------ 257 (593)
Q Consensus 191 ~~~~~~~~~~v~~~~~g~~~i-~~~~~~~~~~~~~l~~~~L~~l~~~a~~~l~~~~~~~viTVPa~~~------------ 257 (593)
..+.. .+.-+...+.. .+. ...++.+++-.. +...+.++++.++.+.++.+|..=.
T Consensus 75 --~~~~v---~~~i~~~~~~~~~~~--~~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~~~~~~~~~~~~~~~v 143 (377)
T 2ych_A 75 --RKRYV---VTALSNLAVILRPIQ--VPKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAPLTPLSEVQEGEQVQV 143 (377)
T ss_dssp --CCCEE---EEEECGGGCEEEEEE--EECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEESSCGGGSCTTSEEEE
T ss_pred --CcceE---EEEecCCcEEEEEEE--CCCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEEeCCCCCCCCcceeEE
Confidence 00111 01111111111 000 134677776543 2345677888888899999873211
Q ss_pred ------HHHHHHHHHHHHHcCCceEEEechhHHHHHHhccc--cCCCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCC
Q 047555 258 ------DSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFE--RKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGD 329 (593)
Q Consensus 258 ------~~~r~~l~~Aa~~AGl~~v~li~Ep~AAal~~~~~--~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~ 329 (593)
....+.+++|++.||++...++.||.|++++|... ...+..++|+|+||||||+++++.+... ..++
T Consensus 144 ~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~-----~~~~ 218 (377)
T 2ych_A 144 MVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPL-----AVRV 218 (377)
T ss_dssp EEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEE-----EEEE
T ss_pred EEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEE-----EEEe
Confidence 12248899999999999999999999999988543 2346779999999999999999844322 2456
Q ss_pred CCccHHHHHHHHHHHHHHHhhhhhCCCCcCCHHHHHHHHHHHHHHhhhcCCCceeeEEeccccccCCCCceeEEEecHHH
Q 047555 330 THLGGDDFDKRVVDWLAENFKRDEGVVLLNDKQALQRLTEAAEKAKMELSSLTQANISLPFITATADGPKHIETTLTRAK 409 (593)
Q Consensus 330 ~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~ 409 (593)
..+||.+||+.+.+.+ +.+ .+.||++|+.++.............. .+ .....+++++
T Consensus 219 ~~~GG~~i~~~i~~~~--------~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~-~~---~~~~~i~~~~ 275 (377)
T 2ych_A 219 LTLSGKDFTEAIARSF--------NLD-----------LLAAEEVKRTYGMATLPTEDEELLLD-FD---AERERYSPGR 275 (377)
T ss_dssp ESCSHHHHHHHHHHHT--------TCC-----------HHHHHHHHHHTC-----------------------------C
T ss_pred eechHHHHHHHHHHHh--------CCC-----------HHHHHHHHhhcccccccccccccccc-cc---cccccCCHHH
Confidence 7899999999988732 221 56899999998854322111000000 00 1345789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHc--CCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCC------------------
Q 047555 410 FEELCSDLLDRLKKPVETALRDA--KLSFNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVT------------------ 469 (593)
Q Consensus 410 ~e~~~~~~~~~i~~~i~~~l~~~--~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~------------------ 469 (593)
+++++++.++++.+.|++.|+.. +.....++.|+|+||++++|+|++.+++.|+.++...
T Consensus 276 ~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~P~~~v~~~~~~~~~~~l 355 (377)
T 2ych_A 276 IYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVNPWEAVAVDPKRFESEQL 355 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEECCGGGGSBCCTTTSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEecCchhhcccCcccCCHHHH
Confidence 99999999999999999999863 4555678999999999999999999999998654322
Q ss_pred --CCChhHHHhHHHHHhh
Q 047555 470 --VNPDEVVALGAAVQGG 485 (593)
Q Consensus 470 --~~p~~aVA~GAal~a~ 485 (593)
.+|..++|.|+++++.
T Consensus 356 ~~~~p~~a~a~Glal~~~ 373 (377)
T 2ych_A 356 QEIGPEFAVALGLALRGV 373 (377)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HhhhHHHHHHHHHHHcCC
Confidence 2456678889888754
No 17
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.88 E-value=1.4e-23 Score=216.02 Aligned_cols=228 Identities=19% Similarity=0.245 Sum_probs=150.7
Q ss_pred CeeeeHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCC-CCHH--HH--HHHHHH------------HHHcCCceEEEe
Q 047555 217 GKQFAAEEISAQVLRKLVDDASKFLNDKITKAVVTVPAY-FNDS--QR--TATKDA------------GRIAGLEVLRII 279 (593)
Q Consensus 217 ~~~~~~~~l~~~~L~~l~~~a~~~l~~~~~~~viTVPa~-~~~~--~r--~~l~~A------------a~~AGl~~v~li 279 (593)
+..+++..+++.+ +.|.. +. ..+.+ .++|+++|.. |... |+ +++.+- .+.+++..+.++
T Consensus 71 ~~~~~~~~l~~i~-~aL~~-~~-~~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~ 146 (320)
T 2zgy_A 71 AWQYSDVNVVAVH-HALLT-SG-LPVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVM 146 (320)
T ss_dssp GGGGSHHHHHHHH-HHHHH-HS-CCSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEE
T ss_pred CccchHHHHHHHH-HHHHH-cC-CCCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEe
Confidence 3456777776654 44433 11 11222 3699999987 6431 11 222221 233456789999
Q ss_pred chhHHHHHHhccccCCCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHHHHHHHHHHHHHhhhhhCCCCcC
Q 047555 280 NEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAENFKRDEGVVLLN 359 (593)
Q Consensus 280 ~Ep~AAal~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~ 359 (593)
+||.||+++++.+..++..++|+|+||||+|+++++ ++...+....++..+||.+||+.+.+++.++ +.++
T Consensus 147 ~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~~i-- 217 (320)
T 2zgy_A 147 PESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA-----RTKG-- 217 (320)
T ss_dssp ESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SBGG--
T ss_pred cCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc-----CCCC--
Confidence 999999999876555678999999999999999998 3333445556778999999999999888642 2221
Q ss_pred CHHHHHHHHHHHHHH-hhhcCCCceeeEEeccccccCCCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Q 047555 360 DKQALQRLTEAAEKA-KMELSSLTQANISLPFITATADGPKHIETTLTRAKFEELCSDLLDRLKKPVETALRDAKLSFND 438 (593)
Q Consensus 360 ~~~~~~~L~~~~e~~-K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~ 438 (593)
. .+.+|++ |..- . .. ......+.+ -..+++.+++++.++++.+.|.+.+++. .+
T Consensus 218 ~-------~~~ae~~lk~~~-~-~~------~~~~~i~~~------~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~ 272 (320)
T 2zgy_A 218 S-------SYLADDIIIHRK-D-NN------YLKQRINDE------NKISIVTEAMNEALRKLEQRVLNTLNEF----SG 272 (320)
T ss_dssp G-------HHHHHHHHHTTT-C-HH------HHHHHSSSS------CTHHHHHHHHHHHHHHHHHHHHHHHTTC----CC
T ss_pred C-------HHHHHHHHHHhh-h-hh------cccceecCc------hhhHHHHHHHHHHHHHHHHHHHHHHHhh----cC
Confidence 1 1234444 3320 0 00 000000000 1245666677777777777777766652 46
Q ss_pred CCeEEEEeCCCChHhHHHHHHhHhCC---CCCCCCCChhHHHhHHHHHh
Q 047555 439 LDEVILVGGSTRIPAVQELVKKMTGK---DPNVTVNPDEVVALGAAVQG 484 (593)
Q Consensus 439 i~~VvLvGG~s~~p~l~~~l~~~~g~---~v~~~~~p~~aVA~GAal~a 484 (593)
++.|+|+||++++ +++.|++.|+. ++....||++|+|+||++++
T Consensus 273 ~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 273 YTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred CCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 8999999999987 99999999987 47778999999999999875
No 18
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.87 E-value=1.2e-23 Score=222.57 Aligned_cols=302 Identities=17% Similarity=0.170 Sum_probs=92.0
Q ss_pred CCeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEEeC-----------CcEEecHHHHHhhhhCCCchhhhh
Q 047555 111 NEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKI-----------GDRLVGQIAKRQAVVNPENTFFSV 179 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~V~~~~~-----------~~~~~G~~A~~~~~~~~~~~i~~~ 179 (593)
....|+||+||.++++++..++.|.++ +||+++.... ...++|++|....
T Consensus 5 ~~~~ivID~Gs~~~k~G~ag~~~P~~~--------~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~----------- 65 (394)
T 1k8k_B 5 GRKVVVCDNGTGFVKCGYAGSNFPEHI--------FPALVGRPIIRSTTKVGNIEIKDLMVGDEASELR----------- 65 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCEEEEECCCCeEEEeeCCCCCccee--------ccceeEEEcccccccccCCCCCCeEEChHHHhcC-----------
Confidence 346789999999999999877767654 5777765432 1334666553220
Q ss_pred hhhhCCCCchhhhhhccCceEEEECCCCcEEEEeCCCCeeeeHHHHHHHHHHHHH-HHHHHHhCCCcCcEEEEeCCCCCH
Q 047555 180 KRFIGRKMSEVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAQVLRKLV-DDASKFLNDKITKAVVTVPAYFND 258 (593)
Q Consensus 180 K~~lg~~~~~~~~~~~~~~~~v~~~~~g~~~i~~~~~~~~~~~~~l~~~~L~~l~-~~a~~~l~~~~~~~viTVPa~~~~ 258 (593)
+...+..|.....+...+.+..+|++++ ...... ...-..+++|+|+.++.
T Consensus 66 ---------------------------~~~~~~~Pi~~G~i~dwd~~e~i~~~~~~~~~L~~-~~~~~~vllt~p~~~~~ 117 (394)
T 1k8k_B 66 ---------------------------SMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNI-DTRNCKILLTEPPMNPT 117 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------------CCceeeccccCCEEecHHHHHHHHHHHhcccccCc-CCCCCcEEEEECCCCCH
Confidence 0001111222333345556666666665 221111 11123599999999999
Q ss_pred HHHHHHHHH-HHHcCCceEEEechhHHHHHHhccccCCCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHH
Q 047555 259 SQRTATKDA-GRIAGLEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDF 337 (593)
Q Consensus 259 ~~r~~l~~A-a~~AGl~~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~i 337 (593)
.+|+++.++ ++.+|++.+.+++||.||+++++. ...+|||+|+|+|+++.+..+ .. +........+||+++
T Consensus 118 ~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~-----~~~lVVDiG~g~T~v~pv~~G--~~-~~~~~~~~~~GG~~l 189 (394)
T 1k8k_B 118 KNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL-----LTGVVVDSGDGVTHICPVYEG--FS-LPHLTRRLDIAGRDI 189 (394)
T ss_dssp -----------------------------------------CCEEEECSSCEEEECEETT--EE-CSTTCEEESCCHHHH
T ss_pred HHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC-----ceEEEEEcCCCceEeeeeECC--EE-cccceEEeeccHHHH
Confidence 999999886 588899999999999999999876 355999999999999877643 21 111123468999999
Q ss_pred HHHHHHHHHHHhhhhhCCCCcCCHHHHHHHHHHHHHHhhhcCCCc----------------eeeEEeccccccCCCCcee
Q 047555 338 DKRVVDWLAENFKRDEGVVLLNDKQALQRLTEAAEKAKMELSSLT----------------QANISLPFITATADGPKHI 401 (593)
Q Consensus 338 d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~----------------~~~i~i~~~~~~~~~~~~~ 401 (593)
|+.|.++|..+. +......+ .+.+|++|+.++... ...+.+| +..
T Consensus 190 t~~l~~~l~~~~---~~~~~~~~-------~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~lp---------dg~ 250 (394)
T 1k8k_B 190 TRYLIKLLLLRG---YAFNHSAD-------FETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLP---------DGR 250 (394)
T ss_dssp HHHHHHHHHHTT---CCCCTTTT-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---------TSC
T ss_pred HHHHHHHHHhcC---CCCCcHHH-------HHHHHHHHHhheeEecCHHHHHHhhccCCcCceEEECC---------CCC
Confidence 999999998651 11110112 345566666654321 1112222 123
Q ss_pred EEEecHHHH---HHHHHHH-----HHHHHHHHHHHHHHcCCC--CCCCCeEEEEeCCCChHhHHHHHHhHhCC-------
Q 047555 402 ETTLTRAKF---EELCSDL-----LDRLKKPVETALRDAKLS--FNDLDEVILVGGSTRIPAVQELVKKMTGK------- 464 (593)
Q Consensus 402 ~~~itr~~~---e~~~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~~g~------- 464 (593)
.+.|+.++| |.+|+|. ...+.+.|.+.|.++... ..-.+.|+|+||+|.+|++.++|++.++.
T Consensus 251 ~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~~~~~~~~ 330 (394)
T 1k8k_B 251 IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVL 330 (394)
T ss_dssp EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHHHHHHHHTC
T ss_pred EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHHHHHHhhhhc
Confidence 577788777 3445542 245778888888876533 12236799999999999999999887742
Q ss_pred ----------CC--CCCCCChhHHHhHHHHHhhh
Q 047555 465 ----------DP--NVTVNPDEVVALGAAVQGGV 486 (593)
Q Consensus 465 ----------~v--~~~~~p~~aVA~GAal~a~~ 486 (593)
++ ....+|..++++|++++|..
T Consensus 331 ~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 331 KGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp SSCCCTTCCCCC----------------------
T ss_pred ccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 22 22567889999999999874
No 19
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.82 E-value=6.4e-20 Score=165.97 Aligned_cols=98 Identities=61% Similarity=1.000 Sum_probs=94.2
Q ss_pred EEecccccceEEeeCCEEEEeecCCCccCCeeEEEEEecCCCceeEEEEEEecCcccccCCceeeEEEEeCCCCCCCCcC
Q 047555 496 LLDVTPLSIGLETLGGVMTKIIPRNTTLPTSKSEVFSTAGDGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVP 575 (593)
Q Consensus 496 ~~~~~~~s~gi~~~~~~~~~li~~g~~~P~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~ 575 (593)
+.|++|+++|+++.+|.|.+||++|+++|++++++|++..|+|+.+.|.||||++.+..+|..||+|.|.|+|++|+|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEECCCceEEEEc
Q 047555 576 QIEVKFDIDANGILSVTA 593 (593)
Q Consensus 576 ~i~v~f~~d~~g~l~v~a 593 (593)
+|+|+|++|.||+|+|+|
T Consensus 82 ~IeVtf~iD~nGiL~Vsa 99 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSA 99 (152)
T ss_dssp CEEEEEEECTTCCEEEEE
T ss_pred eEEEEEEeCCCCeEEEEE
Confidence 999999999999999986
No 20
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.82 E-value=6.9e-20 Score=165.59 Aligned_cols=98 Identities=71% Similarity=1.102 Sum_probs=94.2
Q ss_pred EEecccccceEEeeCCEEEEeecCCCccCCeeEEEEEecCCCceeEEEEEEecCcccccCCceeeEEEEeCCCCCCCCcC
Q 047555 496 LLDVTPLSIGLETLGGVMTKIIPRNTTLPTSKSEVFSTAGDGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVP 575 (593)
Q Consensus 496 ~~~~~~~s~gi~~~~~~~~~li~~g~~~P~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~ 575 (593)
+.|++|+++|+++.+|.|.+||+||+++|++++++|++..|+|+.+.|.||||++.+..+|..||+|.|.|+|++|+|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEECCCceEEEEc
Q 047555 576 QIEVKFDIDANGILSVTA 593 (593)
Q Consensus 576 ~i~v~f~~d~~g~l~v~a 593 (593)
+|+|+|++|.||+|+|+|
T Consensus 82 ~IeVtf~iD~nGiL~Vsa 99 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSA 99 (151)
T ss_dssp CEEEEEEECTTSEEEEEE
T ss_pred EEEEEEEeccCcEEEEEE
Confidence 999999999999999986
No 21
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.82 E-value=7.9e-20 Score=165.64 Aligned_cols=98 Identities=61% Similarity=0.966 Sum_probs=94.9
Q ss_pred EEecccccceEEeeCCEEEEeecCCCccCCeeEEEEEecCCCceeEEEEEEecCcccccCCceeeEEEEeCCCCCCCCcC
Q 047555 496 LLDVTPLSIGLETLGGVMTKIIPRNTTLPTSKSEVFSTAGDGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVP 575 (593)
Q Consensus 496 ~~~~~~~s~gi~~~~~~~~~li~~g~~~P~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~ 575 (593)
+.|++|+++|+++.+|.|.+||+||+++|++++++|++..|+|+.+.|.||||++.+..+|..||+|.|.|+|++|+|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEECCCceEEEEc
Q 047555 576 QIEVKFDIDANGILSVTA 593 (593)
Q Consensus 576 ~i~v~f~~d~~g~l~v~a 593 (593)
+|+|+|++|.||+|+|+|
T Consensus 82 ~I~Vtf~iD~nGiL~V~a 99 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSA 99 (152)
T ss_dssp CEEEEEEECTTSEEEEEE
T ss_pred eEEEEEEEcCCCEEEEEE
Confidence 999999999999999986
No 22
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=99.81 E-value=1.4e-19 Score=174.02 Aligned_cols=99 Identities=70% Similarity=1.083 Sum_probs=96.4
Q ss_pred EEEecccccceEEeeCCEEEEeecCCCccCCeeEEEEEecCCCceeEEEEEEecCcccccCCceeeEEEEeCCCCCCCCc
Q 047555 495 VLLDVTPLSIGLETLGGVMTKIIPRNTTLPTSKSEVFSTAGDGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGV 574 (593)
Q Consensus 495 ~~~~~~~~s~gi~~~~~~~~~li~~g~~~P~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~ 574 (593)
+++|++|+++|+++.+|.|.+|||||+++|++++++|++..|+|+.+.|.||||++.+..+|..||+|.|.|+|++|+|.
T Consensus 2 ~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~ 81 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 81 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred eEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEEECCCceEEEEc
Q 047555 575 PQIEVKFDIDANGILSVTA 593 (593)
Q Consensus 575 ~~i~v~f~~d~~g~l~v~a 593 (593)
++|+|+|++|.||+|+|+|
T Consensus 82 ~~IeVtf~iD~nGiL~V~a 100 (219)
T 4e81_A 82 PQIEVTFDIDADGILHVSA 100 (219)
T ss_dssp SCEEEEEEECTTCCEEEEE
T ss_pred ceEEEEEEeCCCCCEeeee
Confidence 9999999999999999986
No 23
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.80 E-value=1.5e-19 Score=168.13 Aligned_cols=103 Identities=71% Similarity=1.031 Sum_probs=94.3
Q ss_pred CCceEEEecccccceEEeeCCEEEEeecCCCccCCeeEEEEEecCCCceeEEEEEEecCcccccCCceeeEEEEeCCCCC
Q 047555 491 VSDIVLLDVTPLSIGLETLGGVMTKIIPRNTTLPTSKSEVFSTAGDGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPA 570 (593)
Q Consensus 491 ~~~~~~~~~~~~s~gi~~~~~~~~~li~~g~~~P~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~ 570 (593)
...+.+.|++|+++|+++.+|.|.+|||||+++|++++++|++..|+|+.+.|.||||++.+..+|..||+|.|.|+|++
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~ 96 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA 96 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCeEEEEEEECCCceEEEEc
Q 047555 571 PRGVPQIEVKFDIDANGILSVTA 593 (593)
Q Consensus 571 ~~g~~~i~v~f~~d~~g~l~v~a 593 (593)
|+|.++|+|+|++|.||+|+|+|
T Consensus 97 p~G~~~IeVtf~iD~nGiL~VsA 119 (182)
T 3n8e_A 97 PRGVPQIEVTFDIDANGIVHVSA 119 (182)
T ss_dssp CTTCSCEEEEEEECTTCCEEEEE
T ss_pred CCCCeeEEEEEEEecCCEEEEEE
Confidence 99999999999999999999986
No 24
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.80 E-value=8.3e-20 Score=162.09 Aligned_cols=103 Identities=65% Similarity=1.006 Sum_probs=93.9
Q ss_pred CCceEEEecccccceEEeeCCEEEEeecCCCccCCeeEEEEEecCCCceeEEEEEEecCcccccCCceeeEEEEeCCCCC
Q 047555 491 VSDIVLLDVTPLSIGLETLGGVMTKIIPRNTTLPTSKSEVFSTAGDGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPA 570 (593)
Q Consensus 491 ~~~~~~~~~~~~s~gi~~~~~~~~~li~~g~~~P~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~ 570 (593)
.+++.+.|++|+++|+++.++.|.+||+||+++|++++++|++..|+|+.+.|.|||||+.+..+|..||+|.|.|+|++
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCeEEEEEEECCCceEEEEc
Q 047555 571 PRGVPQIEVKFDIDANGILSVTA 593 (593)
Q Consensus 571 ~~g~~~i~v~f~~d~~g~l~v~a 593 (593)
|+|.++|+|+|++|.||+|+|+|
T Consensus 94 p~G~~~IeVtf~iD~nGiL~V~a 116 (135)
T 1q5l_A 94 PRGMPQIEVTFDIDADGILHVSA 116 (135)
T ss_dssp CSSSCCEEEEEEECTTSEEEEEE
T ss_pred CCceeEEEEEEEECCCCEEEEEE
Confidence 99999999999999999999986
No 25
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.78 E-value=8.6e-19 Score=188.04 Aligned_cols=182 Identities=16% Similarity=0.171 Sum_probs=132.5
Q ss_pred CeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEEeC---CcEEecHHHHHhhhhCCCchhhhhhhhhCCCCc
Q 047555 112 EKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKI---GDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMS 188 (593)
Q Consensus 112 ~~vVGIDfGTt~s~va~~~~g~~~ii~~~~g~~~~PS~V~~~~~---~~~~~G~~A~~~~~~~~~~~i~~~K~~lg~~~~ 188 (593)
...|+||+||.++++++..++.|.++ +||+|+...+ ...++|+++...
T Consensus 23 ~~~iVID~GS~~~kaG~ag~~~P~~v--------~PSvVg~~~~~~~~~~~vG~e~~~~--------------------- 73 (498)
T 3qb0_A 23 VSAVVIDPGSYTTNIGYSGSDFPQSI--------LPSVYGKYTADEGNKKIFSEQSIGI--------------------- 73 (498)
T ss_dssp BSCEEEECCSSEEEEEETTCSSCSEE--------EESEEEEESSCSSCCEECCTTGGGS---------------------
T ss_pred CCeEEEECCCcEEEEEECCCCCeeee--------cCceeEEeccCCCccEEEecHHHhc---------------------
Confidence 35689999999999999877767665 6999998653 245678753111
Q ss_pred hhhhhhccCceEEEECCCCcEEEEeCCCCeeeeHHHHHHHHHHHHHHHHHHHhCCCcC-cEEEEeCCCCCHHHHHHHHHH
Q 047555 189 EVDDESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLNDKIT-KAVVTVPAYFNDSQRTATKDA 267 (593)
Q Consensus 189 ~~~~~~~~~~~~v~~~~~g~~~i~~~~~~~~~~~~~l~~~~L~~l~~~a~~~l~~~~~-~~viTVPa~~~~~~r~~l~~A 267 (593)
..+.+.+..|.....+...+.+..+|+++...... ...... .+++|.|.......|+.|.++
T Consensus 74 ----------------~r~~l~l~~Pi~~GvI~dwd~~E~iw~~~f~~~L~-v~p~~~~pvlltep~~n~~~~Re~~~ei 136 (498)
T 3qb0_A 74 ----------------PRKDYELKPIIENGLVIDWDTAQEQWQWALQNELY-LNSNSGIPALLTEPVWNSTENRKKSLEV 136 (498)
T ss_dssp ----------------CCTTEEEEESEETTEESCHHHHHHHHHHHHHHTSC-CSCCTTCCEEEEECTTCCHHHHHHHHHH
T ss_pred ----------------CcCceEEeccCcCCEEccHHHHHHHHHHHHHhhhC-CCcccCCceEEEeCCCCcHHHHHHHHHH
Confidence 01223344444455667788888888888753211 111123 699999999999999999997
Q ss_pred -HHHcCCceEEEechhHHHHHHhccccCCCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHHHHHHHHHHH
Q 047555 268 -GRIAGLEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLA 346 (593)
Q Consensus 268 -a~~AGl~~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~id~~l~~~l~ 346 (593)
++.+|++.+.++.+|.+|+++++.. .-||||+|+|+|+++.+..+ . .+........+||+++|+.|.++|.
T Consensus 137 lFE~f~vpav~l~~~~vlalya~G~~-----tglVVDiG~g~T~vvPI~~G--~-~l~~ai~rl~vgG~~lt~~L~~lL~ 208 (498)
T 3qb0_A 137 LLEGMQFEACYLAPTSTCVSFAAGRP-----NCLVVDIGHDTCSVSPIVDG--M-TLSKSTRRNFIAGKFINHLIKKALE 208 (498)
T ss_dssp HHTTSCCSEEEEEEHHHHHHHHHTCS-----SEEEEEECSSCEEEEEEETT--E-ECGGGCEEESCSHHHHHHHHHHHTT
T ss_pred HHhhcCCCeEeecchHHHHHHHcCCC-----eEEEEEcCCCcEEEEEEeCC--E-EccccceeccccHHHHHHHHHHHHH
Confidence 5889999999999999999999863 24999999999999988633 1 1111122358999999999999987
Q ss_pred H
Q 047555 347 E 347 (593)
Q Consensus 347 ~ 347 (593)
.
T Consensus 209 ~ 209 (498)
T 3qb0_A 209 P 209 (498)
T ss_dssp T
T ss_pred h
Confidence 5
No 26
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.78 E-value=1.1e-18 Score=158.82 Aligned_cols=98 Identities=63% Similarity=1.026 Sum_probs=94.5
Q ss_pred EEecccccceEEeeCCEEEEeecCCCccCCeeEEEEEecCCCceeEEEEEEecCcccccCCceeeEEEEeCCCCCCCCcC
Q 047555 496 LLDVTPLSIGLETLGGVMTKIIPRNTTLPTSKSEVFSTAGDGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVP 575 (593)
Q Consensus 496 ~~~~~~~s~gi~~~~~~~~~li~~g~~~P~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~ 575 (593)
+.|++|++||+++.++.|.+||++|++||++++..|++..|+|+.+.|.||||++.+..+|..||+|.|.|+|+.|+|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEECCCceEEEEc
Q 047555 576 QIEVKFDIDANGILSVTA 593 (593)
Q Consensus 576 ~i~v~f~~d~~g~l~v~a 593 (593)
+|+|+|++|.||+|+|+|
T Consensus 82 ~I~V~f~id~nGiL~V~a 99 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSA 99 (152)
T ss_dssp CEEEEEEECTTSCEEEEE
T ss_pred eEEEEEEECCCcEEEEEE
Confidence 999999999999999986
No 27
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.77 E-value=3.6e-18 Score=177.39 Aligned_cols=204 Identities=17% Similarity=0.226 Sum_probs=137.9
Q ss_pred cEEEEeCCCCCHHHH-HHHHHHHHHcCC------------ceEEEechhHHHHHHhccccC------CCceEEEEeeCCc
Q 047555 247 KAVVTVPAYFNDSQR-TATKDAGRIAGL------------EVLRIINEPTAASLAYGFERK------NNETILVFDLGGG 307 (593)
Q Consensus 247 ~~viTVPa~~~~~~r-~~l~~Aa~~AGl------------~~v~li~Ep~AAal~~~~~~~------~~~~vlVvD~Ggg 307 (593)
.+++++|..+...++ +++++++...+- ..+.+++||.||+++++.+.. .+..++|+|+|||
T Consensus 115 ~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGgg 194 (355)
T 3js6_A 115 VIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSG 194 (355)
T ss_dssp EEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSS
T ss_pred EEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCC
Confidence 689999998887776 589998875543 578899999999999876532 3788999999999
Q ss_pred eEEEEEEEEcCCEEEEEEecCCCCccHHHHHHHHHHHHHHHhhhhhCCCCcCCHHHHHHHHHHHHHHhhhcCCCceeeEE
Q 047555 308 TFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAENFKRDEGVVLLNDKQALQRLTEAAEKAKMELSSLTQANIS 387 (593)
Q Consensus 308 T~Dvsv~~~~~~~~~vl~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~ 387 (593)
|||++++. ++.+ +...++...+||..+++++.+++.+++. +..+. . +..++.+. +..
T Consensus 195 Ttd~~v~~--~~~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~-------~~i~~g~~-~~~------- 251 (355)
T 3js6_A 195 TTIIDTYQ--NMKR-VEEESFVINKGTIDFYKRIASHVSKKSE---GASIT--P-------RMIEKGLE-YKQ------- 251 (355)
T ss_dssp CEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSCCC-----------
T ss_pred cEEEEEEc--CCEE-ccccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--H-------HHHhcCCc-ccc-------
Confidence 99999993 3332 1112334679999999999999887642 11111 1 11111111 000
Q ss_pred eccccccCCCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHh--HHHHHHhHhCCC
Q 047555 388 LPFITATADGPKHIETTLTRAKFEELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPA--VQELVKKMTGKD 465 (593)
Q Consensus 388 i~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~--l~~~l~~~~g~~ 465 (593)
...+..+ .+.+ .+.+++.+++++++|.+.|++.+.+ ...++.|+|+||++.++. |++.|++.|+..
T Consensus 252 -----~~~~~~k--~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~ 319 (355)
T 3js6_A 252 -----CKLNQKT--VIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA 319 (355)
T ss_dssp -----------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC
T ss_pred -----ccccccc--cccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC
Confidence 0000000 0111 2456777777777777777777754 355789999999999998 889999988442
Q ss_pred CCCCCCChhHHHhHHHHHhhhhcC
Q 047555 466 PNVTVNPDEVVALGAAVQGGVLAG 489 (593)
Q Consensus 466 v~~~~~p~~aVA~GAal~a~~l~~ 489 (593)
.||.+|+|+|+..++..+.+
T Consensus 320 ----~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 320 ----DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp ----SSGGGHHHHHHHHHHHHHHH
T ss_pred ----CCcHHHHHHHHHHHHHHHHh
Confidence 99999999999999876643
No 28
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.76 E-value=2.1e-19 Score=190.90 Aligned_cols=250 Identities=16% Similarity=0.124 Sum_probs=161.5
Q ss_pred CeeeeHHHHHHHHHHHHHHHHHHHhCCC--cCcEEEEeCCCCCHHHHHHHHHHH-HHcCCceEEEechhHHHHHHhcccc
Q 047555 217 GKQFAAEEISAQVLRKLVDDASKFLNDK--ITKAVVTVPAYFNDSQRTATKDAG-RIAGLEVLRIINEPTAASLAYGFER 293 (593)
Q Consensus 217 ~~~~~~~~l~~~~L~~l~~~a~~~l~~~--~~~~viTVPa~~~~~~r~~l~~Aa-~~AGl~~v~li~Ep~AAal~~~~~~ 293 (593)
...+...+.+..+|+++... .++.. -..+++|.|.......|+.|.+++ +.+|++.+.++.+|.+|+++.+...
T Consensus 96 ~GvI~dwd~~e~iw~~~~~~---~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~ 172 (427)
T 3dwl_A 96 HGQIENWDHMERFWQQSLFK---YLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSS 172 (427)
T ss_dssp TTEECCHHHHHHHHHHHHHT---TSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGST
T ss_pred cCeeccHHHHHHHHHHHHhH---hhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcc
Confidence 44556778888888877642 23322 236999999999999999999886 7899999999999999999987532
Q ss_pred C---CCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHHHHHHHHHHHHHhhhhhCCCCcCCHHHHHHHHHH
Q 047555 294 K---NNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAENFKRDEGVVLLNDKQALQRLTEA 370 (593)
Q Consensus 294 ~---~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ 370 (593)
+ ....-||||+|+|+|+++.+..+ . .+........+||+++|+.|.++|..+.....+ .+.
T Consensus 173 ~~~~~~~tglVVDiG~g~T~v~PV~~G--~-~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~~~~-------------~~~ 236 (427)
T 3dwl_A 173 KVTDRSLTGTVVDSGDGVTHIIPVAEG--Y-VIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSS-------------LKT 236 (427)
T ss_dssp TTCSCCCCEEEEEESSSCEEEEEEETT--E-ECGGGCEEESCCHHHHHHHHHHTTC---------------------CHH
T ss_pred cccCCCceEEEEECCCCceEEEEEECC--E-EehhhheeccccHHHHHHHHHHHHHHcCCCchh-------------HHH
Confidence 1 13467999999999999998533 1 111112235899999999999988765432111 345
Q ss_pred HHHHhhhcCCCcee---e--------EEeccccc-cCCCCceeEEEecHHHH---HHHHHHH------HHHHHHHHHHHH
Q 047555 371 AEKAKMELSSLTQA---N--------ISLPFITA-TADGPKHIETTLTRAKF---EELCSDL------LDRLKKPVETAL 429 (593)
Q Consensus 371 ~e~~K~~Ls~~~~~---~--------i~i~~~~~-~~~~~~~~~~~itr~~~---e~~~~~~------~~~i~~~i~~~l 429 (593)
+|++|+.++..... + ..+..... ..++ ....+.+..++| |-+|+|- ...|.++|.+.|
T Consensus 237 ~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g-~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI 315 (427)
T 3dwl_A 237 AERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITG-HSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVV 315 (427)
T ss_dssp HHHHHHHHCCCCSCHHHHHHHTTC-----CCBCC----------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHH
T ss_pred HHHHHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCC-CeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHH
Confidence 66777766542110 0 00000000 0111 123466777776 4455552 245778888888
Q ss_pred HHcCCC--CCCCCeEEEEeCCCChHhHHHHHHhHhC----------------------CCCCCCCCChhHHHhHHHHHhh
Q 047555 430 RDAKLS--FNDLDEVILVGGSTRIPAVQELVKKMTG----------------------KDPNVTVNPDEVVALGAAVQGG 485 (593)
Q Consensus 430 ~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~~g----------------------~~v~~~~~p~~aVA~GAal~a~ 485 (593)
.++... ..-...|+|+||++.+|++.++|++.+. .++..+.++..++++|++++|.
T Consensus 316 ~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 316 QSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 875432 1112469999999999999999987651 1223345778999999999986
Q ss_pred h
Q 047555 486 V 486 (593)
Q Consensus 486 ~ 486 (593)
.
T Consensus 396 l 396 (427)
T 3dwl_A 396 T 396 (427)
T ss_dssp S
T ss_pred c
Confidence 4
No 29
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.73 E-value=2e-17 Score=160.57 Aligned_cols=97 Identities=56% Similarity=0.956 Sum_probs=94.0
Q ss_pred EecccccceEEeeCCEEEEeecCCCccCCeeEEEEEecCCCceeEEEEEEecCcccccCCceeeEEEEeCCCCCCCCcCe
Q 047555 497 LDVTPLSIGLETLGGVMTKIIPRNTTLPTSKSEVFSTAGDGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQ 576 (593)
Q Consensus 497 ~~~~~~s~gi~~~~~~~~~li~~g~~~P~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~~ 576 (593)
+|++|+++|+++.++.|.+||++|+++|++++++|++..|+|+.+.|.||||++.++.+|..||+|.|.|+|++|+|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEECCCceEEEEc
Q 047555 577 IEVKFDIDANGILSVTA 593 (593)
Q Consensus 577 i~v~f~~d~~g~l~v~a 593 (593)
|+|+|++|.||+|+|+|
T Consensus 81 I~Vtf~iD~nGiL~V~a 97 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTA 97 (227)
T ss_dssp EEEEEEECTTCCEEEEE
T ss_pred EEEEEEECCCCcEEEEe
Confidence 99999999999999986
No 30
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.72 E-value=2.4e-17 Score=165.75 Aligned_cols=185 Identities=18% Similarity=0.202 Sum_probs=122.3
Q ss_pred cCCceEEEechhHHHHHHhccccCCCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHHHHHHHHHHHHHhh
Q 047555 271 AGLEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAENFK 350 (593)
Q Consensus 271 AGl~~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~id~~l~~~l~~~~~ 350 (593)
++......++|++|.++++..... ....|+|+|||+++++++. .++.++.....+....|+.++++.+.+++...+.
T Consensus 69 a~~~~~~~Vne~~aha~a~~~~~~--~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~~~ 145 (276)
T 4ehu_A 69 NYSDADKQISELSCHARGVNFIIP--ETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVDVS 145 (276)
T ss_dssp GCCSCSEECCHHHHHHHHHHHHST--TCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHHHTCCGG
T ss_pred HhhCCCcccchHHHHHHHHHHhCC--CCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHHhccChh
Confidence 556677899999999988766543 3447899999999999885 5667777777777888988888888888765443
Q ss_pred hhhCCCCcCCHHHHHHHHHHHHHHhhh--cCCCceeeEEeccccccCCCCceeEEEecHHHHHHHHHHHHHHHHHHHHHH
Q 047555 351 RDEGVVLLNDKQALQRLTEAAEKAKME--LSSLTQANISLPFITATADGPKHIETTLTRAKFEELCSDLLDRLKKPVETA 428 (593)
Q Consensus 351 ~~~~~~~~~~~~~~~~L~~~~e~~K~~--Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~ 428 (593)
.... .+.+++.. ++.....-...+....... ....++++..+.+.+.+.+...
T Consensus 146 ~~~~---------------~~~~a~~~~~i~~~~~~f~~s~~~~~~~~----------~~~~~di~a~~~~~v~~~l~~~ 200 (276)
T 4ehu_A 146 ELGS---------------ISMNSQNEVSISSTCTVFAESEVISHLSE----------NAKIEDIVAGIHTSVAKRVSSL 200 (276)
T ss_dssp GHHH---------------HHTTCSSCCCCCCCSHHHHHHHHHHHHHT----------TCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhHH---------------HHhcCCCCCCcCCccchhhhhHHHHhhhc----------cccHHHHHHHHHHHHHHHHHHH
Confidence 2210 01111100 0000000000000000000 0112455666665555555544
Q ss_pred HHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhh
Q 047555 429 LRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVL 487 (593)
Q Consensus 429 l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l 487 (593)
..+. ..++.|+|+||.+++|.|++.|++.+|.++..+.+|++++|+|||++|...
T Consensus 201 ~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~ 255 (276)
T 4ehu_A 201 VKRI----GVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDE 255 (276)
T ss_dssp HHHH----CCCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHHH
T ss_pred HHhc----ccCCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHHH
Confidence 4443 346789999999999999999999999999999999999999999998654
No 31
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.67 E-value=1.3e-17 Score=171.77 Aligned_cols=202 Identities=20% Similarity=0.190 Sum_probs=141.2
Q ss_pred cEEEEeCCCCCH--HHHHHHHHHHHHc--------C------CceEEEechhHHHHHHhccccCCCceEEEEeeCCceEE
Q 047555 247 KAVVTVPAYFND--SQRTATKDAGRIA--------G------LEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFD 310 (593)
Q Consensus 247 ~~viTVPa~~~~--~~r~~l~~Aa~~A--------G------l~~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~D 310 (593)
.+++++|..+.. .+|+.+++.+..- | ++.+.+++||.+|.+.+. ...++..++|+|+||||||
T Consensus 107 ~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~-~~~~~~~v~vvDiGggTtd 185 (329)
T 4apw_A 107 QLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ-ENFKNKNVAVIDFGGLNMG 185 (329)
T ss_dssp EEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC-CCCTTCEEEEEEECSSCEE
T ss_pred EEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc-hhhccCCEEEEEeCCCcEE
Confidence 689999987664 3677787776631 2 245788999999988764 3335789999999999999
Q ss_pred EEEEEEcCCEEEEEEecCCCCccHHHHHHHHHHHHHH-HhhhhhCCCCcCCHHHHHHHHHHHHHHhhhcCCCceeeEEec
Q 047555 311 VSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAE-NFKRDEGVVLLNDKQALQRLTEAAEKAKMELSSLTQANISLP 389 (593)
Q Consensus 311 vsv~~~~~~~~~vl~~~~~~~lGG~~id~~l~~~l~~-~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~ 389 (593)
++++.. +.+ +...++...+||.++++.+.+++.+ +++...+ ...+|++|+. .. ..
T Consensus 186 ~~v~~~--g~~-~~~~~~~~~~G~~~~~~~i~~~l~~~~~g~~i~-------------~~~~e~i~~~-g~---~~---- 241 (329)
T 4apw_A 186 FSLYRN--CVV-NPSERFIEEHGVKDLIIRVGDALTDLNNGNLIT-------------NEQAESALNN-GY---MK---- 241 (329)
T ss_dssp EEEEET--TEE-CGGGCEEESCCHHHHHHHHHTSSSSCSSCSCTT-------------SBTTTTCSSS-CS---SC----
T ss_pred EEEEEC--CEE-eeccccchhhHHHHHHHHHHHHHHhhccCCCCC-------------HHHHHHHHhc-CC---cc----
Confidence 999993 332 2222345779999999999988776 5443221 1123344432 11 00
Q ss_pred cccccCCCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCC
Q 047555 390 FITATADGPKHIETTLTRAKFEELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVT 469 (593)
Q Consensus 390 ~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~ 469 (593)
... + . ..+..+.+++.++++++.|.+.+++. . .....++.|+|+||++.+ +.+.|++.|+.++...
T Consensus 242 -~g~--~----~-~~~~~~~i~~~~~e~~~~I~~~i~~~-~---~~~~~~~~IvltGGGA~l--~~~~l~~~~~~~v~v~ 307 (329)
T 4apw_A 242 -KGG--E----I-DTESSTVIKKVKEKFLKDAIKLIEKR-G---FKLDQLDSLIFIGGTTQK--LKEQISKTYPNNSIIT 307 (329)
T ss_dssp -EEC--T----T-CCSTTHHHHHHHHHHHHHHHHHHHHH-T---CCTTSCSEEEEESTTHHH--HHHHHHHHSTTCEECC
T ss_pred -cCC--c----c-hhHHHHHHHHHHHHHHHHHHHHHHHc-C---CCHHHccEEEEECChHHH--HHHHHHHHcCCCCEec
Confidence 000 0 0 12456777888888888877777766 2 334447899999999987 6799999998778889
Q ss_pred CCChhHHHhHHHHHhhhh
Q 047555 470 VNPDEVVALGAAVQGGVL 487 (593)
Q Consensus 470 ~~p~~aVA~GAal~a~~l 487 (593)
.||.+|+|+|+..++...
T Consensus 308 ~~P~~a~a~G~~~~~~~k 325 (329)
T 4apw_A 308 NNSQWTTCEGLYKVAVAK 325 (329)
T ss_dssp SSGGGHHHHHHHHHHHHH
T ss_pred CCChhhHHHHHHHHHhhh
Confidence 999999999999887643
No 32
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.64 E-value=2.2e-14 Score=159.84 Aligned_cols=116 Identities=15% Similarity=0.215 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcC-----cEEEEeCCCCCHHHHHHHHHH-HHHcCCceEEEechhHHHHHHhccccCC
Q 047555 222 AEEISAQVLRKLVDDASKFLNDKIT-----KAVVTVPAYFNDSQRTATKDA-GRIAGLEVLRIINEPTAASLAYGFERKN 295 (593)
Q Consensus 222 ~~~l~~~~L~~l~~~a~~~l~~~~~-----~~viTVPa~~~~~~r~~l~~A-a~~AGl~~v~li~Ep~AAal~~~~~~~~ 295 (593)
..+-+..+|+|++. +.++.... .+++|.|..++...|+.|.+. ++..|+..+.++.++.+|+++++..
T Consensus 173 ~wdd~e~iw~~~~~---~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~--- 246 (593)
T 4fo0_A 173 VLADIEVIWSHAIQ---KYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS--- 246 (593)
T ss_dssp HHHHHHHHHHHHHH---HTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS---
T ss_pred CHHHHHHHHHHHHH---HhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC---
Confidence 34444444444443 34554332 499999999999999999877 7788999999999999999999865
Q ss_pred CceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHHHHHHHHHHHHH
Q 047555 296 NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAEN 348 (593)
Q Consensus 296 ~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~id~~l~~~l~~~ 348 (593)
+-+|||+|.+.|+++-+.-+-. +........+||.++++.|.++|..+
T Consensus 247 --tglVVDiG~~~T~v~PV~dG~~---l~~~~~rl~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 247 --STCIVDVGDQKTSVCCVEDGVS---HRNTRLCLAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp --EEEEEEECSSCEEEEEEESSCB---CGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred --ceEEEEeCCCceeeeeeECCEE---ehhheEEecccHHHHHHHHHHHHHhc
Confidence 4599999999999998875421 11112225799999999999988765
No 33
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.38 E-value=2.9e-12 Score=134.46 Aligned_cols=200 Identities=20% Similarity=0.192 Sum_probs=142.3
Q ss_pred HHHHHHHHHHHHHc-CC--ceEEEechhHHHHHHhccccCCCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccH
Q 047555 258 DSQRTATKDAGRIA-GL--EVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGG 334 (593)
Q Consensus 258 ~~~r~~l~~Aa~~A-Gl--~~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG 334 (593)
..+-+.+.+|.+++ |+ ++-. .||.||+++++.+.+.+..++++|+||||||++++.-+...+ ......||
T Consensus 367 ~~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv~-----a~~ip~gG 439 (610)
T 2d0o_A 367 RLQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDII-----ATHLAGAG 439 (610)
T ss_dssp CCCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCEE-----EEEEECSH
T ss_pred HHHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE-----EEEeccch
Confidence 44678889999999 99 6655 999999999999999999999999999999999999776554 44467899
Q ss_pred HHHHHHHHHHHHHHhhhhhCCCCcCCHHHHHHHHHHHHHHhhhcCCCc----------eeeEEe--cccccc-CCC----
Q 047555 335 DDFDKRVVDWLAENFKRDEGVVLLNDKQALQRLTEAAEKAKMELSSLT----------QANISL--PFITAT-ADG---- 397 (593)
Q Consensus 335 ~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~----------~~~i~i--~~~~~~-~~~---- 397 (593)
++++..+..-|.-. + +..||++|. +.... ...+.+ +.+... ...
T Consensus 440 ~~VT~DIA~~Lgt~-----------d-------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~Rv~~~ 500 (610)
T 2d0o_A 440 DMVTMIIARELGLE-----------D-------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFARVCVV 500 (610)
T ss_dssp HHHHHHHHHHHTCC-----------C-------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEEE
T ss_pred HHHHHHHHHHhCCC-----------C-------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeecc
Confidence 99999887655422 0 458899998 54221 122333 222111 111
Q ss_pred CceeEEEecHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CCCCCCeEEEEeCCCChHhHHHHHHhHhCC-CCC
Q 047555 398 PKHIETTLTRAK--FEELCSDLLDRLKKP--VETALRDAKL-----SFNDLDEVILVGGSTRIPAVQELVKKMTGK-DPN 467 (593)
Q Consensus 398 ~~~~~~~itr~~--~e~~~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~-~v~ 467 (593)
....-..| +.+ +|+ ++-+-+++.+. +.+.|+..+. +..+|..|+|+||+|+++.+.+..++.|+. ++.
T Consensus 501 ~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~VR 578 (610)
T 2d0o_A 501 KADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLV 578 (610)
T ss_dssp CSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSCE
T ss_pred cccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeE
Confidence 00112355 666 777 66666665554 3444555432 235679999999999999999999999976 432
Q ss_pred -------CCCCChhHHHhHHHHHhh
Q 047555 468 -------VTVNPDEVVALGAAVQGG 485 (593)
Q Consensus 468 -------~~~~p~~aVA~GAal~a~ 485 (593)
....|..|+|.|.+++..
T Consensus 579 iGrP~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 579 AGRGNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp EEECCGGGTSTTSCHHHHHHHHHHH
T ss_pred EecCCccccCCCcHHHHHHHHHHHh
Confidence 246999999999998754
No 34
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.36 E-value=2.7e-12 Score=135.13 Aligned_cols=197 Identities=17% Similarity=0.148 Sum_probs=141.0
Q ss_pred HHHHHHHHHHHHc-CC--ceEEEechhHHHHHHhccccCCCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHH
Q 047555 259 SQRTATKDAGRIA-GL--EVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGD 335 (593)
Q Consensus 259 ~~r~~l~~Aa~~A-Gl--~~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~ 335 (593)
.+-+.+.+|.+++ |+ ++-. .||.||+++++.+.+.+..++++|+||||||++++.-+...+ ......||+
T Consensus 370 ~~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv~-----a~~ip~gG~ 442 (607)
T 1nbw_A 370 LQMQVIARELSARLQTEVVVGG--VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQIT-----AVHLAGAGN 442 (607)
T ss_dssp CCSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCEE-----EEEEECCHH
T ss_pred HHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE-----EEEeccchH
Confidence 3456788888888 88 4444 999999999999999999999999999999999999776654 444678999
Q ss_pred HHHHHHHHHHHHHhhhhhCCCCcCCHHHHHHHHHHHHHHhhhcCCCc----------eeeEEe--cccccc-CCC-----
Q 047555 336 DFDKRVVDWLAENFKRDEGVVLLNDKQALQRLTEAAEKAKMELSSLT----------QANISL--PFITAT-ADG----- 397 (593)
Q Consensus 336 ~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~----------~~~i~i--~~~~~~-~~~----- 397 (593)
+++..+..-|.-. + +..||++|. +.... ...+.+ +.+... ...
T Consensus 443 ~VT~DIA~~Lg~~-----------d-------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~~~~~ 503 (607)
T 1nbw_A 443 MVSLLIKTELGLE-----------D-------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKVVYIK 503 (607)
T ss_dssp HHHHHHHHHHTCS-----------C-------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEEEE
T ss_pred HHHHHHHHHhCCC-----------C-------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeeccc
Confidence 9999887655422 0 458899998 54221 112333 222111 111
Q ss_pred CceeEEEecHHH--HHHHHHHHHHHHHHH--HHHHHHHcCCC-----CCCCCeEEEEeCCCChHhHHHHHHhHhCC-CCC
Q 047555 398 PKHIETTLTRAK--FEELCSDLLDRLKKP--VETALRDAKLS-----FNDLDEVILVGGSTRIPAVQELVKKMTGK-DPN 467 (593)
Q Consensus 398 ~~~~~~~itr~~--~e~~~~~~~~~i~~~--i~~~l~~~~~~-----~~~i~~VvLvGG~s~~p~l~~~l~~~~g~-~v~ 467 (593)
+ ..-..| +.+ +|+ ++-+-+++.+. +.+.|+..+.. ..+|..|+|+||+|+++.+.++.++.|+. ++.
T Consensus 504 ~-~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~VR 580 (607)
T 1nbw_A 504 E-GELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVV 580 (607)
T ss_dssp T-TEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTCE
T ss_pred c-cceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeE
Confidence 0 112355 566 777 66666666554 45567776653 34669999999999999999999999965 432
Q ss_pred -------CCCCChhHHHhHHHHHh
Q 047555 468 -------VTVNPDEVVALGAAVQG 484 (593)
Q Consensus 468 -------~~~~p~~aVA~GAal~a 484 (593)
....|..|+|.|.+++.
T Consensus 581 iGrP~~~g~~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 581 AGQGNIRGTEGPRNAVATGLLLAG 604 (607)
T ss_dssp EEECCGGGTSCSCCHHHHHHHHHH
T ss_pred EecCCccccCCchHHHHHHHHHhh
Confidence 24699999999999874
No 35
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=99.17 E-value=3.5e-10 Score=122.53 Aligned_cols=145 Identities=17% Similarity=0.206 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCc-----CcEEEEeCCCCCHHHHHHHHHHH-HHcCCceEEEechhHHHHHHhccccCCC
Q 047555 223 EEISAQVLRKLVDDASKFLNDKI-----TKAVVTVPAYFNDSQRTATKDAG-RIAGLEVLRIINEPTAASLAYGFERKNN 296 (593)
Q Consensus 223 ~~l~~~~L~~l~~~a~~~l~~~~-----~~~viTVPa~~~~~~r~~l~~Aa-~~AGl~~v~li~Ep~AAal~~~~~~~~~ 296 (593)
.+.+..+|+++... ..++... ..+++|+|..+....|+.|.+++ +..|++.+.++.+|.+|+++++. .
T Consensus 196 WD~mE~Iw~y~f~~--~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl----~ 269 (655)
T 4am6_A 196 ISDVTKLLEHALNS--ETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI----S 269 (655)
T ss_dssp HHHHHHHHHHHHBS--SSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC----S
T ss_pred HHHHHHHHHHHhcc--ccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC----C
Confidence 55666666665531 1333322 36999999999999999998885 67999999999999999999874 2
Q ss_pred ceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHHHHHHHHHHHHHhhhhhCCCCcCCHHHHHHHHHHHHHHhh
Q 047555 297 ETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAENFKRDEGVVLLNDKQALQRLTEAAEKAKM 376 (593)
Q Consensus 297 ~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~ 376 (593)
..-||||+|+|+|+++.+..+ . .+........+||.++|+.|.++|..+--......+... .=++.++.+|+
T Consensus 270 ttGLVVDiG~g~T~VvPV~eG--~-vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~-----~e~eiVrdIKE 341 (655)
T 4am6_A 270 TSTCVVNIGAAETRIACVDEG--T-VLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSK-----HGWLLAERLKK 341 (655)
T ss_dssp SCEEEEEECSSCEEEEEEETT--E-ECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSH-----HHHHHHHHHHH
T ss_pred CceEEEcCCCceEEEEEEeCC--E-EEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCCc-----chHHHHHHHHH
Confidence 356999999999999988633 1 111112236899999999999999875210000111110 11456777787
Q ss_pred hcCCC
Q 047555 377 ELSSL 381 (593)
Q Consensus 377 ~Ls~~ 381 (593)
.++..
T Consensus 342 k~CyV 346 (655)
T 4am6_A 342 NFTTF 346 (655)
T ss_dssp HHCCC
T ss_pred heEEE
Confidence 77654
No 36
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.83 E-value=9.9e-08 Score=94.94 Aligned_cols=73 Identities=15% Similarity=0.160 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhh
Q 047555 411 EELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVL 487 (593)
Q Consensus 411 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l 487 (593)
++++..+++.+...+.+.++..+. .+.|+++||.++++.+++.+++.++.++..+.+|+.+.|+|||++|...
T Consensus 185 ~di~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 185 IDIIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 444445555555555444443221 3679999999999999999999999998888889889999999998753
No 37
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=97.44 E-value=0.0016 Score=64.47 Aligned_cols=74 Identities=18% Similarity=0.168 Sum_probs=53.6
Q ss_pred cHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeC-CCChHhHHHHHHhHh---CCCCCCCCCChhHHHhHH
Q 047555 406 TRAKFE-ELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGG-STRIPAVQELVKKMT---GKDPNVTVNPDEVVALGA 480 (593)
Q Consensus 406 tr~~~e-~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG-~s~~p~l~~~l~~~~---g~~v~~~~~p~~aVA~GA 480 (593)
+++++. .++..+.+++..+...+.+..+ ++.|+++|| .+..|.+++.+++.+ +.++..+.+|..+.|.||
T Consensus 208 ~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlGA 282 (287)
T 2ews_A 208 TPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIGA 282 (287)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHHH
Confidence 444443 3444444444444444444433 557999999 899999999999974 677888999999999999
Q ss_pred HHHh
Q 047555 481 AVQG 484 (593)
Q Consensus 481 al~a 484 (593)
|+.+
T Consensus 283 aL~~ 286 (287)
T 2ews_A 283 LYLE 286 (287)
T ss_dssp HHTC
T ss_pred HHhC
Confidence 9874
No 38
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.23 E-value=0.0024 Score=65.03 Aligned_cols=69 Identities=16% Similarity=0.158 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHHH----HHHcCCCCCCCCeEEEEeC-CCChHhHHHHHHhHhC------CCCCCCCCChhHHHhH
Q 047555 411 EELCSDLLDRLKKPVETA----LRDAKLSFNDLDEVILVGG-STRIPAVQELVKKMTG------KDPNVTVNPDEVVALG 479 (593)
Q Consensus 411 e~~~~~~~~~i~~~i~~~----l~~~~~~~~~i~~VvLvGG-~s~~p~l~~~l~~~~g------~~v~~~~~p~~aVA~G 479 (593)
++++..++..+.+.|-.. ....+ ++.|+++|| .+..|++++.|++.++ .++..+.+|..+-|+|
T Consensus 279 eDIa~gll~sVa~~I~~lA~l~A~~~~-----i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlG 353 (360)
T 2i7n_A 279 EDLARATLVTITNNIGSIARMCALNEN-----IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVG 353 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-----CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHH
Confidence 444444444444444333 23333 446999999 8999999999999863 5777788999999999
Q ss_pred HHHHh
Q 047555 480 AAVQG 484 (593)
Q Consensus 480 Aal~a 484 (593)
|++.+
T Consensus 354 AaL~~ 358 (360)
T 2i7n_A 354 ALLEL 358 (360)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99975
No 39
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=96.92 E-value=0.027 Score=56.68 Aligned_cols=77 Identities=16% Similarity=0.252 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHcCCceEEEechhHHHHHHhccc--cC-CCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHH
Q 047555 260 QRTATKDAGRIAGLEVLRIINEPTAASLAYGFE--RK-NNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDD 336 (593)
Q Consensus 260 ~r~~l~~Aa~~AGl~~v~li~Ep~AAal~~~~~--~~-~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~ 336 (593)
..+.+.++-+..|++.-.+-.|-+|...+.+.. .. .....+|+|+|||+|.+++++-+... ...+.++|...
T Consensus 91 ~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~-----~~~Sl~lG~vr 165 (315)
T 3mdq_A 91 KQVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEIL-----WKQSFEIGGQR 165 (315)
T ss_dssp HHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEE-----EEEEESCCHHH
T ss_pred HHHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEe-----eeEEEechhhH
Confidence 345556666678998855555666654443322 11 24679999999999999998733222 13346889888
Q ss_pred HHHHH
Q 047555 337 FDKRV 341 (593)
Q Consensus 337 id~~l 341 (593)
+.+.+
T Consensus 166 l~e~f 170 (315)
T 3mdq_A 166 LIDRF 170 (315)
T ss_dssp HHHHS
T ss_pred HHHHh
Confidence 77754
No 40
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=96.86 E-value=0.47 Score=47.85 Aligned_cols=65 Identities=26% Similarity=0.244 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHh---CCCCCCCC---CChhHHHhHHHHHhhhhc
Q 047555 419 DRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMT---GKDPNVTV---NPDEVVALGAAVQGGVLA 488 (593)
Q Consensus 419 ~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~---g~~v~~~~---~p~~aVA~GAal~a~~l~ 488 (593)
+.+.+.++++.+..+ ++.|+|+||.++...+++.|.+.+ |.++..+. --|.+++.|++.+.....
T Consensus 230 ~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~ 300 (330)
T 2ivn_A 230 AALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKA 300 (330)
T ss_dssp HHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHhc
Confidence 334444444444433 568999999999999999999877 55444433 235578888887654433
No 41
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.79 E-value=0.0057 Score=61.68 Aligned_cols=77 Identities=17% Similarity=0.116 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHcCCceEEEechhHHHHHHhccc--cCCCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHH
Q 047555 260 QRTATKDAGRIAGLEVLRIINEPTAASLAYGFE--RKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDF 337 (593)
Q Consensus 260 ~r~~l~~Aa~~AGl~~v~li~Ep~AAal~~~~~--~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~i 337 (593)
..+.+.++-+..|++.-.+-.|.+|...+.+.. .......+|+|+|||+|.+++++ ++.+. ...+..+|+..+
T Consensus 99 ~~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~--~~~~~---~~~Sl~~G~v~l 173 (315)
T 1t6c_A 99 AEEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGK--GYKVR---EVISLPIGIVNL 173 (315)
T ss_dssp HHHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEE--TTEEE---EEEEECCCHHHH
T ss_pred HHHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEe--CCcee---eEEEEeccHHHH
Confidence 345556666678998866666777765554322 11356799999999999999986 33321 233478999998
Q ss_pred HHHH
Q 047555 338 DKRV 341 (593)
Q Consensus 338 d~~l 341 (593)
.+.+
T Consensus 174 ~e~~ 177 (315)
T 1t6c_A 174 TETF 177 (315)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8775
No 42
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.58 E-value=0.19 Score=49.91 Aligned_cols=58 Identities=14% Similarity=0.082 Sum_probs=39.7
Q ss_pred cCcEEEEeCCCCCH-HHHHHHHHHHHHcCCceEEEechhHHHHHHhccccCCCceEEEEeeCCce
Q 047555 245 ITKAVVTVPAYFND-SQRTATKDAGRIAGLEVLRIINEPTAASLAYGFERKNNETILVFDLGGGT 308 (593)
Q Consensus 245 ~~~~viTVPa~~~~-~~r~~l~~Aa~~AGl~~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT 308 (593)
+..+.|++|.. +. .....+.+..+..+ -.+.+.++..|++++-.. ..+++++-+|-|.
T Consensus 60 ~~~igi~~~G~-~~~~~~~~l~~~l~~~~-~pv~v~ND~~aaa~~e~~----~~~~v~l~~GTG~ 118 (299)
T 2e2o_A 60 ADVVGMGVAGL-DSKFDWENFTPLASLIA-PKVIIQHDGVIALFAETL----GEPGVVVIAGTGS 118 (299)
T ss_dssp CSEEEEEETTC-CSHHHHHHHHHHHTTSS-SEEEEEEHHHHHHHHHHT----TSCEEEEEESSSE
T ss_pred CCEEEEEcCCC-CchhHHHHHHHHHHhCC-CCEEEeCcHHHHHhhccC----CCCeEEEEecCCE
Confidence 45789999988 53 33334555544434 356889999999987543 3567788899884
No 43
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=96.36 E-value=0.29 Score=49.09 Aligned_cols=43 Identities=19% Similarity=0.310 Sum_probs=30.6
Q ss_pred cCCceEEEechhHHHHHHhccc--cCCCceEEEEeeCCceEEEEEEE
Q 047555 271 AGLEVLRIINEPTAASLAYGFE--RKNNETILVFDLGGGTFDVSVLE 315 (593)
Q Consensus 271 AGl~~v~li~Ep~AAal~~~~~--~~~~~~vlVvD~GggT~Dvsv~~ 315 (593)
.|++ +.+.++..|+|++-... .+..++++++-+|.| +-..++.
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~ 140 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIII 140 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEE
Confidence 4776 68999999999875432 223567888888888 5555554
No 44
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.35 E-value=0.0052 Score=65.97 Aligned_cols=79 Identities=20% Similarity=0.264 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhcCC
Q 047555 412 ELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLAGD 490 (593)
Q Consensus 412 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~~~ 490 (593)
++++.+++.+.-.++..++........++.|.++||+++++.+.+.+.+.+|.++.....++.+.|+|||+.|+.-.|.
T Consensus 360 ~~~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~lA~~~~g~ 438 (484)
T 2itm_A 360 ELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANP 438 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHHHHHHcCC
Confidence 3455555555554554444432223457889999999999999999999999998877666656899999999875553
No 45
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.31 E-value=0.0071 Score=66.09 Aligned_cols=85 Identities=20% Similarity=0.214 Sum_probs=63.4
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHh
Q 047555 405 LTRAKFEELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQG 484 (593)
Q Consensus 405 itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a 484 (593)
-++.++..+++.+++.+.-.++..++........++.|.++||.++++.+.+.+.+.+|.++.+.. ..++.|+|||+.|
T Consensus 409 ~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~~-~~e~~alGAA~lA 487 (554)
T 3l0q_A 409 TTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANATGCAMLLPE-ESEAMLLGSAMMG 487 (554)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHHCCEEEEES-CSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhhCCeEEecC-CCcchHHHHHHHH
Confidence 367777544566666665555555554332334688999999999999999999999999887654 4678999999999
Q ss_pred hhhcCC
Q 047555 485 GVLAGD 490 (593)
Q Consensus 485 ~~l~~~ 490 (593)
+.-.|.
T Consensus 488 ~~a~G~ 493 (554)
T 3l0q_A 488 TVAAGV 493 (554)
T ss_dssp HHHTTS
T ss_pred HHHcCC
Confidence 876654
No 46
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=96.27 E-value=1.1 Score=45.07 Aligned_cols=68 Identities=22% Similarity=0.259 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHh---CCCCCCCC---CChhHHHhHHHHHhhhhcC
Q 047555 417 LLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMT---GKDPNVTV---NPDEVVALGAAVQGGVLAG 489 (593)
Q Consensus 417 ~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~---g~~v~~~~---~p~~aVA~GAal~a~~l~~ 489 (593)
+.+.+.+.++++++..+ ++.|+|+||.++...+++.|.+.+ |.++..+. --|.+++.|++.+.....+
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 44445556666666544 568999999999999999999887 55544433 2467889999876554444
No 47
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=96.21 E-value=0.0083 Score=64.64 Aligned_cols=78 Identities=19% Similarity=0.238 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhcCC
Q 047555 411 EELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLAGD 490 (593)
Q Consensus 411 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~~~ 490 (593)
.++++.+++.+.-.++..++...... .++.|+++||.++++.+.+.+.+.+|.++..... .++.|+|||+.|+.-.|.
T Consensus 367 ~~l~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~-~e~~alGaA~lA~~~~g~ 444 (497)
T 2zf5_O 367 EHLARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNRKVIRPVV-KETTALGAAYLAGLAVDY 444 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEESC-SCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCCeEEEcCC-CcchHHHHHHHHHHHhCc
Confidence 34455666666666666666554333 6788999999999999999999999998875544 558999999999875553
No 48
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=96.17 E-value=0.0099 Score=64.13 Aligned_cols=79 Identities=11% Similarity=0.048 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhcCCC
Q 047555 412 ELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLAGDV 491 (593)
Q Consensus 412 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~~~~ 491 (593)
++++.+++.+.-.++..++........++.|.++||+++++.+.+.+.+.+|.++... .+.++.|+|||+.|+.-.|..
T Consensus 367 ~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~G~~ 445 (504)
T 3ll3_A 367 EMARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIFNVPIVTM-KEQQSGTLAAMFLARQALGLN 445 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHHHHHHhhCCeEEec-CCCCchhHHHHHHHHHHcCcc
Confidence 3445555555544444444332222468899999999999999999999999988754 456799999999998765543
No 49
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=96.16 E-value=0.0078 Score=65.05 Aligned_cols=77 Identities=12% Similarity=0.012 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCCC-CCCCCChhHHHhHHHHHhhhhcCC
Q 047555 412 ELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKDP-NVTVNPDEVVALGAAVQGGVLAGD 490 (593)
Q Consensus 412 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v-~~~~~p~~aVA~GAal~a~~l~~~ 490 (593)
++++.+++.+.-.++..++.... .. ++.|.++||+++++.+.+.+.+.+|.++ .. ..+.++.|+|||+.|+.-.|.
T Consensus 378 ~l~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~~e~~alGaA~lA~~a~G~ 454 (511)
T 3hz6_A 378 QILLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNLNVSLLVK-PDAHLHPLRGLAALAAVELEW 454 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHHTCEEEEC-CCGGGHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHHCCeeEEe-cCCCCchHHHHHHHHHHHhCC
Confidence 44555555555555555554433 34 8899999999999999999999999988 54 458889999999999876664
Q ss_pred C
Q 047555 491 V 491 (593)
Q Consensus 491 ~ 491 (593)
.
T Consensus 455 ~ 455 (511)
T 3hz6_A 455 S 455 (511)
T ss_dssp C
T ss_pred c
Confidence 3
No 50
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=96.10 E-value=0.69 Score=46.47 Aligned_cols=44 Identities=18% Similarity=0.369 Sum_probs=30.5
Q ss_pred HcCCceEEEechhHHHHHHhccc--cCCCceEEEEeeCCceEEEEEEE
Q 047555 270 IAGLEVLRIINEPTAASLAYGFE--RKNNETILVFDLGGGTFDVSVLE 315 (593)
Q Consensus 270 ~AGl~~v~li~Ep~AAal~~~~~--~~~~~~vlVvD~GggT~Dvsv~~ 315 (593)
..|++ +.+.++..|+|++-... .+..++++++-+|-| +-..++.
T Consensus 119 ~~~~p-V~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtG-iG~gii~ 164 (327)
T 4db3_A 119 KIGRS-VKIENDANCFALSEAWDEELQDAPSVMGLILGTG-FGGGLIY 164 (327)
T ss_dssp HHSSC-CEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSS-EEEEEEE
T ss_pred HHCCC-EEEecchhHHHHHHHHhCCCCCCCcEEEEEeCcc-ceEEEEE
Confidence 34776 68999999999976443 223577888888877 4555544
No 51
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.01 E-value=0.013 Score=63.85 Aligned_cols=78 Identities=8% Similarity=0.075 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhcC
Q 047555 411 EELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLAG 489 (593)
Q Consensus 411 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~~ 489 (593)
.++++.+++.+.-.++..++........++.|.++||+++++.+.+.+.+.+|.++... .+.++.|+|||+.|+.-.|
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVI-DTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEEC-CCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEec-CCCCchHHHHHHHHHHHhC
Confidence 55566666666666666666655444567889999999999999999999999988654 4577999999999886443
No 52
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.91 E-value=0.01 Score=64.19 Aligned_cols=77 Identities=23% Similarity=0.342 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhcC
Q 047555 412 ELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLAG 489 (593)
Q Consensus 412 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~~ 489 (593)
++++.+++.+.-.++..++........++.|+++||.++++.+.+.+.+.+|.++... .+.++.|+|||+.|+.-.+
T Consensus 398 ~l~RAvlEgia~~~r~~l~~l~~~g~~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA~~a~G 474 (515)
T 3i8b_A 398 NLARAFVEGLLCSQRDCLELIRSLGASITRILLIGGGAKSEAIRTLAPSILGMDVTRP-ATDEYVAIGAARQAAWVLS 474 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-CCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEECchhcCHHHHHHHHHHhCCceEec-CCcccHHHHHHHHHHHHcC
Confidence 3444444444444444333221123457899999999999999999999999988654 4566889999999987554
No 53
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.89 E-value=0.0096 Score=64.18 Aligned_cols=80 Identities=18% Similarity=0.204 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC-CCCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhcCC
Q 047555 412 ELCSDLLDRLKKPVETALRDAKL-SFNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLAGD 490 (593)
Q Consensus 412 ~~~~~~~~~i~~~i~~~l~~~~~-~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~~~ 490 (593)
++++.+++.+.-.++..++.... ....++.|.++||.++++.+.+.+.+.+|.++... .+.++.|+|||+.|+.-.|.
T Consensus 377 ~l~RAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~la~~a~G~ 455 (501)
T 3g25_A 377 HFIRATLESLCYQTRDVMEAMSKDSGIDVQSLRVDGGAVKNNFIMQFQADIVNTSVERP-EIQETTALGAAFLAGLAVGF 455 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSCCCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecchhcCHHHHHHHHHHhCCceEec-CCCcchHHHHHHHHHHHhCc
Confidence 34444444444444444433211 12357899999999999999999999999988654 46678999999999876664
Q ss_pred CC
Q 047555 491 VS 492 (593)
Q Consensus 491 ~~ 492 (593)
.+
T Consensus 456 ~~ 457 (501)
T 3g25_A 456 WE 457 (501)
T ss_dssp SS
T ss_pred cC
Confidence 33
No 54
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.84 E-value=0.0093 Score=64.40 Aligned_cols=53 Identities=19% Similarity=0.193 Sum_probs=45.3
Q ss_pred CCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhcCC
Q 047555 437 NDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLAGD 490 (593)
Q Consensus 437 ~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~~~ 490 (593)
..++.|.++||+++++.+.+.+.+.+|.++..... .++.|+|||+.|+.-.|.
T Consensus 399 ~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~-~e~~alGaA~lA~~a~G~ 451 (508)
T 3ifr_A 399 HAPQRFFASDGGTRSRVWMGIMADVLQRPVQLLAN-PLGSAVGAAWVAAIGGGD 451 (508)
T ss_dssp CCCCEEEEESGGGGCHHHHHHHHHHHTSCEEEEEC-CSTHHHHHHHHHHHHTCS
T ss_pred CCCCEEEEeCCcccCHHHHHHHHHHhCCeEEecCC-CCchHHHHHHHHHHHhCC
Confidence 35789999999999999999999999999876655 458899999999876654
No 55
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=95.77 E-value=0.39 Score=48.05 Aligned_cols=43 Identities=21% Similarity=0.445 Sum_probs=29.9
Q ss_pred cCCceEEEechhHHHHHHhccc--cCCCceEEEEeeCCceEEEEEEE
Q 047555 271 AGLEVLRIINEPTAASLAYGFE--RKNNETILVFDLGGGTFDVSVLE 315 (593)
Q Consensus 271 AGl~~v~li~Ep~AAal~~~~~--~~~~~~vlVvD~GggT~Dvsv~~ 315 (593)
.|++ +.+.++..|+|++-... ....++++++-+|.| +-..++.
T Consensus 108 ~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv~ 152 (326)
T 2qm1_A 108 LGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIVA 152 (326)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEE
T ss_pred hCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEE
Confidence 4665 68999999999875332 123567888889988 5555554
No 56
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=95.75 E-value=0.82 Score=45.34 Aligned_cols=44 Identities=23% Similarity=0.257 Sum_probs=29.4
Q ss_pred HcCCceEEEechhHHHHHHhccc--cCCCceEEEEeeCCceEEEEEEE
Q 047555 270 IAGLEVLRIINEPTAASLAYGFE--RKNNETILVFDLGGGTFDVSVLE 315 (593)
Q Consensus 270 ~AGl~~v~li~Ep~AAal~~~~~--~~~~~~vlVvD~GggT~Dvsv~~ 315 (593)
..|++ +.+.|+..|+|++-... ....++++++-+|.| +-..++.
T Consensus 97 ~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~ 142 (302)
T 3vov_A 97 ATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVVL 142 (302)
T ss_dssp HHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEE
T ss_pred hhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEEE
Confidence 34665 68999999999876433 123567888888877 4444443
No 57
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.73 E-value=0.011 Score=64.17 Aligned_cols=56 Identities=23% Similarity=0.261 Sum_probs=47.0
Q ss_pred CCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhcCCCCc
Q 047555 437 NDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLAGDVSD 493 (593)
Q Consensus 437 ~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~~~~~~ 493 (593)
..++.|.++||+++++.+.+.+.+.+|.++.+.. ..++.|+|||+.|+.-.|..++
T Consensus 401 ~~~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~~-~~E~~alGAA~lA~~a~G~~~~ 456 (526)
T 3ezw_A 401 IRLHALRVDGGAVANNFLMQFQSDILGTRVERPE-VREVTALGAAYLAGLAVGFWQN 456 (526)
T ss_dssp CCCSEEEEESGGGGCHHHHHHHHHHHTSEEEEES-CCCHHHHHHHHHHHHHTTSSSC
T ss_pred CCCCEEEEECchhhCHHHHHHHHHHHCCEEEeCC-CCchHHHHHHHHHHHHhCCCCC
Confidence 4578999999999999999999999999887554 4578999999999886664433
No 58
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.66 E-value=0.011 Score=63.82 Aligned_cols=77 Identities=21% Similarity=0.224 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC-CCCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhcCC
Q 047555 413 LCSDLLDRLKKPVETALRDAKL-SFNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLAGD 490 (593)
Q Consensus 413 ~~~~~~~~i~~~i~~~l~~~~~-~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~~~ 490 (593)
+++.+++.+.-.++..++.... ....++.|.++||+++++.+.+.+.+.+|.++.+.. +.++.|+|||+.|+.-.|.
T Consensus 375 l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~-~~e~~alGaA~lA~~a~G~ 452 (510)
T 2p3r_A 375 IIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPE-VREVTALGAAYLAGLAVGF 452 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEEEESGGGGCHHHHHHHHHHHTSEEEEES-CCCHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEeCchhcCHHHHHHHHHHhCCceEecC-CCCcHHHHHHHHHHHHhCc
Confidence 3444444444444433333211 123578899999999999999999999999886544 5678999999999876654
No 59
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=95.61 E-value=0.12 Score=52.58 Aligned_cols=79 Identities=19% Similarity=0.186 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHcCCceEEEechhHHHHHHhcc--ccC---CCceEEEEeeCCceEEEEEEEE--cC--CEEEEEEecCCC
Q 047555 260 QRTATKDAGRIAGLEVLRIINEPTAASLAYGF--ERK---NNETILVFDLGGGTFDVSVLEV--GD--GVFEVLSTSGDT 330 (593)
Q Consensus 260 ~r~~l~~Aa~~AGl~~v~li~Ep~AAal~~~~--~~~---~~~~vlVvD~GggT~Dvsv~~~--~~--~~~~vl~~~~~~ 330 (593)
..+.+.++-+..|++.-.+--|-+|...+.+. ... ....++|+|+|||+|+++++.- .+ +.+ ......
T Consensus 104 ~~~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~---~~~~Sl 180 (343)
T 3cer_A 104 REEFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQV---QGAFSM 180 (343)
T ss_dssp HHHHHHHHHHHHSSCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSC---SEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCccccc---ceeEEE
Confidence 34556666667799874444455554333332 111 2356999999999999999865 22 100 013346
Q ss_pred CccHHHHHHHH
Q 047555 331 HLGGDDFDKRV 341 (593)
Q Consensus 331 ~lGG~~id~~l 341 (593)
++|+..+.+.+
T Consensus 181 plG~v~lt~~~ 191 (343)
T 3cer_A 181 NIGSVRMTERH 191 (343)
T ss_dssp SCCHHHHHHHT
T ss_pred ehhHHHHHHHh
Confidence 89999988776
No 60
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=95.60 E-value=0.013 Score=63.31 Aligned_cols=53 Identities=23% Similarity=0.258 Sum_probs=45.5
Q ss_pred CCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhcCCC
Q 047555 438 DLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLAGDV 491 (593)
Q Consensus 438 ~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~~~~ 491 (593)
.++.|.++||+++++.+.+.+.+.+|.++.+. .+.++.|+|||+.|+.-.|..
T Consensus 403 ~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~G~~ 455 (506)
T 3h3n_X 403 DIPLLKVDGGAAKNDLLMQFQADILDIDVQRA-ANLETTALGAAYLAGLAVGFW 455 (506)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHHTSEEEEC-SSSCHHHHHHHHHHHHHTTSS
T ss_pred CCCEEEEecccccCHHHHHHHHHHhCCeEEec-CCCcchhHHHHHHHHHHhCcc
Confidence 57889999999999999999999999988654 466799999999998766643
No 61
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=95.58 E-value=0.011 Score=63.87 Aligned_cols=54 Identities=19% Similarity=0.086 Sum_probs=44.6
Q ss_pred CCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhcCCCC
Q 047555 438 DLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLAGDVS 492 (593)
Q Consensus 438 ~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~~~~~ 492 (593)
.++.|.++||.++++.+.+.+.+.+|.++... .+.++.|+|||+.|+.-.|..+
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA~~a~G~~~ 478 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRP-VILETTALGVAWLAGSRAGVWP 478 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCCCHHHHHHHHHHHHHHTSSC
T ss_pred CcceEEEeCccccCHHHHHHHHHHhCCeEEec-CCCccHHHHHHHHHHHHcCCcC
Confidence 47789999999999999999999999988754 4567899999999987666433
No 62
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=95.54 E-value=0.02 Score=61.65 Aligned_cols=77 Identities=23% Similarity=0.219 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC-CCCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhcC
Q 047555 412 ELCSDLLDRLKKPVETALRDAKL-SFNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLAG 489 (593)
Q Consensus 412 ~~~~~~~~~i~~~i~~~l~~~~~-~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~~ 489 (593)
++++.+++.+.-.++..++.... ....++.|+++||.++++.+.+.+.+.+|.++.... +.++.|+|||+.|+.-.|
T Consensus 371 ~~~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~~-~~e~~alGaA~la~~a~G 448 (495)
T 2dpn_A 371 HLARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLLGVPVAVPE-VTETTALGAALMAGVGAG 448 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHHTSCEEEES-CSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHHHHHHHhCCeeEecC-CcccHHHHHHHHHHhhcC
Confidence 34445555555555555544321 224567899999999999999999999999887544 456899999999887555
No 63
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=95.53 E-value=0.35 Score=48.57 Aligned_cols=45 Identities=22% Similarity=0.338 Sum_probs=30.9
Q ss_pred HHc-CCceEEEechhHHHHHHhccc--cCCCceEEEEeeCCceEEEEEEE
Q 047555 269 RIA-GLEVLRIINEPTAASLAYGFE--RKNNETILVFDLGGGTFDVSVLE 315 (593)
Q Consensus 269 ~~A-Gl~~v~li~Ep~AAal~~~~~--~~~~~~vlVvD~GggT~Dvsv~~ 315 (593)
+.. |++ +.+.++..|+|++-... ....++++++-+|.| +-..++.
T Consensus 115 ~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii~ 162 (321)
T 3r8e_A 115 SEFPHIH-FKIENDAKCAALGEYYFGENKRMQTFILLALGTG-VGSGVMM 162 (321)
T ss_dssp HHCTTSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEE
T ss_pred HHcCCCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEE
Confidence 345 665 68999999999875432 233567888888888 5555554
No 64
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=95.51 E-value=0.12 Score=55.57 Aligned_cols=76 Identities=20% Similarity=0.227 Sum_probs=47.4
Q ss_pred HHHHHHHHHHcCCceEEEechhHHHHHHhccc--cCCCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHHH
Q 047555 261 RTATKDAGRIAGLEVLRIINEPTAASLAYGFE--RKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFD 338 (593)
Q Consensus 261 r~~l~~Aa~~AGl~~v~li~Ep~AAal~~~~~--~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~id 338 (593)
.+.+.++-+..|++.-.+--|-+|...+.+.. ....+..+|+|+|||+|.+++.+ ++... ...+.++|...+.
T Consensus 99 ~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~--~~~~~---~~~Sl~lG~vrlt 173 (513)
T 1u6z_A 99 TDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGE--NFEPI---LVESRRMGCVSFA 173 (513)
T ss_dssp HHHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEE--TTEEE---EEEEESCCHHHHH
T ss_pred HHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEe--CCeee---EEEEEeccHHHHH
Confidence 34555555567988744444545544433322 22223699999999999999875 33321 1334789999888
Q ss_pred HHH
Q 047555 339 KRV 341 (593)
Q Consensus 339 ~~l 341 (593)
+.|
T Consensus 174 e~f 176 (513)
T 1u6z_A 174 QLY 176 (513)
T ss_dssp HHH
T ss_pred HHH
Confidence 776
No 65
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=95.46 E-value=2.4 Score=42.54 Aligned_cols=61 Identities=10% Similarity=-0.003 Sum_probs=42.3
Q ss_pred CcCcEEEEeCCCCCHHHHHHHHHHHHHc-C--CceEEEechhHHHHHHhccccCCCceEEEEeeCCceE
Q 047555 244 KITKAVVTVPAYFNDSQRTATKDAGRIA-G--LEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTF 309 (593)
Q Consensus 244 ~~~~~viTVPa~~~~~~r~~l~~Aa~~A-G--l~~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~ 309 (593)
.+..+.|++|...+......+++..+.. + ...+.+.++..|+++++ . +...+++=+|-|.-
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~----~~~~v~v~~GTGig 133 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T----PDGGVVLISGTGSN 133 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C----SSCEEEEEESSSEE
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C----CCCcEEEEEcCCce
Confidence 4667899999988876666666665543 4 14578999999999984 2 23455666666543
No 66
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.45 E-value=0.014 Score=63.89 Aligned_cols=77 Identities=21% Similarity=0.265 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCC-ChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhcC
Q 047555 412 ELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGST-RIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLAG 489 (593)
Q Consensus 412 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s-~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~~ 489 (593)
++++.+++.+.-.++..++........++.|.++||++ +++.+.+.+.+.+|.++.+. .+.++.|+|||+.|+.-.|
T Consensus 413 ~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~G 490 (572)
T 3jvp_A 413 EIYRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVTNREIKVA-ASKQTPALGAAMFASVAAG 490 (572)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEB-CCSSHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHHCCeeEec-CCCccHHHHHHHHHHHhcC
Confidence 34555555555444444443322334578999999999 99999999999999988654 4578999999999987665
No 67
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=95.28 E-value=0.02 Score=61.67 Aligned_cols=52 Identities=23% Similarity=0.290 Sum_probs=43.9
Q ss_pred CC-CeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhcCC
Q 047555 438 DL-DEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLAGD 490 (593)
Q Consensus 438 ~i-~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~~~ 490 (593)
.+ +.|+++||.++++.+.+.+.+.+|.++... .+.++.|+|||+.|+.-.|.
T Consensus 406 ~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~-~~~e~~alGaA~la~~~~G~ 458 (503)
T 2w40_A 406 EMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVS-KYKEVTSLGAAVLAGLEVKI 458 (503)
T ss_dssp SCCSCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHHHHTTC
T ss_pred CccceEEEeCccccCHHHHHHHHHHHCCeEEec-CCCcchHHHHHHHHHHHhCc
Confidence 36 779999999999999999999999988754 44568999999999875553
No 68
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=95.24 E-value=0.023 Score=61.28 Aligned_cols=52 Identities=29% Similarity=0.333 Sum_probs=44.6
Q ss_pred CCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhhhcCC
Q 047555 438 DLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGVLAGD 490 (593)
Q Consensus 438 ~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~l~~~ 490 (593)
.++.|.++||.++++.+.+.+.+.+|.++... .+.++.|+|||+.|+.-.|.
T Consensus 403 ~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA~~~~G~ 454 (504)
T 2d4w_A 403 DLTELRVDGGMVANELLMQFQADQLGVDVVRP-KVAETTALGAAYAAGIAVGF 454 (504)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHHHHHTS
T ss_pred CcceEEEeCCcccCHHHHHHHHHHhCCeEEeC-CCCcchHHHHHHHHHhhcCc
Confidence 46889999999999999999999999988754 45668999999999876553
No 69
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=95.02 E-value=0.95 Score=44.47 Aligned_cols=45 Identities=13% Similarity=0.163 Sum_probs=30.6
Q ss_pred HHcCCceEEEechhHHHHHHhccccCCCceEEEEeeCCceEEEEEEE
Q 047555 269 RIAGLEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLE 315 (593)
Q Consensus 269 ~~AGl~~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~Dvsv~~ 315 (593)
+..|++ +.+.++..|+|++-.......++++++-+|.| +-..++.
T Consensus 92 ~~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv~ 136 (292)
T 2gup_A 92 SSYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMII 136 (292)
T ss_dssp GGGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEEE
T ss_pred HHcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEEE
Confidence 345665 68999999999876542233567888888887 4455443
No 70
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=94.98 E-value=3.6 Score=42.06 Aligned_cols=70 Identities=16% Similarity=0.187 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCCh-HhHHHHHHhHhCC--------CCCCCCCChhHHHhHHH
Q 047555 411 EELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRI-PAVQELVKKMTGK--------DPNVTVNPDEVVALGAA 481 (593)
Q Consensus 411 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~-p~l~~~l~~~~g~--------~v~~~~~p~~aVA~GAa 481 (593)
.++++...+.+...+..++.-. +++.|+|.||.+.. +.+.+.+++.+.. ++........+.++||+
T Consensus 292 ~~~l~~~~~~La~~i~~l~~~l-----dP~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa 366 (380)
T 2hoe_A 292 KEYFDDIARYFSIGLLNLIHLF-----GISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAA 366 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-----CCCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-----CCCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHH
Confidence 3444444444444454444443 35679999998764 6676766665521 11222334567899999
Q ss_pred HHhh
Q 047555 482 VQGG 485 (593)
Q Consensus 482 l~a~ 485 (593)
.++.
T Consensus 367 ~l~~ 370 (380)
T 2hoe_A 367 VHAL 370 (380)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 71
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=94.84 E-value=2 Score=42.92 Aligned_cols=43 Identities=14% Similarity=0.235 Sum_probs=29.3
Q ss_pred cCCceEEEechhHHHHHHhccc--cCCCceEEEEeeCCceEEEEEEE
Q 047555 271 AGLEVLRIINEPTAASLAYGFE--RKNNETILVFDLGGGTFDVSVLE 315 (593)
Q Consensus 271 AGl~~v~li~Ep~AAal~~~~~--~~~~~~vlVvD~GggT~Dvsv~~ 315 (593)
.+++ +.+.++..|+|++-... .+..++++++-+|-| +-..++.
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv~ 164 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLVL 164 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEEE
Confidence 4665 78999999999875332 123567888888887 4455443
No 72
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=94.53 E-value=0.037 Score=59.34 Aligned_cols=48 Identities=19% Similarity=0.218 Sum_probs=40.1
Q ss_pred CCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhh
Q 047555 437 NDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGV 486 (593)
Q Consensus 437 ~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~ 486 (593)
..++.|.++||+++++.+.+.+.+.+|.++.... .++.|.||++.|..
T Consensus 392 ~~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~--~e~~alGaa~~A~~ 439 (489)
T 2uyt_A 392 EDFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP--VEASTLGNIGIQLM 439 (489)
T ss_dssp CCCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC--TTHHHHHHHHHHHH
T ss_pred CCCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC--ccHhHHHHHHHHHH
Confidence 3478899999999999999999999999886443 58899999665543
No 73
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=94.20 E-value=4.7 Score=39.71 Aligned_cols=64 Identities=19% Similarity=0.073 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCC--hHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhhh
Q 047555 414 CSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTR--IPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGGV 486 (593)
Q Consensus 414 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~--~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~~ 486 (593)
...++++..+.+-..+...-.. ++..|+|.||.+. .+++.+.+++.+ . .|+.+.+.||++++..
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~~--~p~~VvlgGgv~~~~~~~l~~~l~~~i----~---~~~~~~~~GAa~la~~ 293 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDPQ--DELPVALCGGLGQALRDWLPPGFRQRL----V---APQGDSAQGALLLLQR 293 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTT--CCSCEEEESHHHHHTGGGSCHHHHHHC----C---CCSSCHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHhcC--CCCeEEEECCchHhHHHHHHHHHHhhc----c---CCCCCHHHHHHHHHhh
Confidence 4445555555555555544322 6778999998864 567777777753 1 2567779999998753
No 74
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=94.03 E-value=2 Score=44.46 Aligned_cols=43 Identities=12% Similarity=0.220 Sum_probs=29.7
Q ss_pred cCCceEEEechhHHHHHHhccc--cCCCceEEEEeeCCceEEEEEEE
Q 047555 271 AGLEVLRIINEPTAASLAYGFE--RKNNETILVFDLGGGTFDVSVLE 315 (593)
Q Consensus 271 AGl~~v~li~Ep~AAal~~~~~--~~~~~~vlVvD~GggT~Dvsv~~ 315 (593)
.|++ +.+.++..|+|++-... ....++++++-+|.| +-..++.
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv~ 230 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVIT 230 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEEE
Confidence 4665 68999999999875432 123567888888887 4555553
No 75
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=93.84 E-value=1.5 Score=43.14 Aligned_cols=61 Identities=11% Similarity=0.072 Sum_probs=37.4
Q ss_pred CcCcEEEEeCCCCCHHHHHHHHHHHH-HcCC-ceEEEechhHHHHHHhccccCCCceEEEEeeCCceE
Q 047555 244 KITKAVVTVPAYFNDSQRTATKDAGR-IAGL-EVLRIINEPTAASLAYGFERKNNETILVFDLGGGTF 309 (593)
Q Consensus 244 ~~~~~viTVPa~~~~~~r~~l~~Aa~-~AGl-~~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~ 309 (593)
.+..+.|++|..- ......+++.++ ..++ ..+.+.+...+|+++-. .....+++=+|-|.-
T Consensus 59 ~i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~----g~~~~v~v~~GTGig 121 (291)
T 1zbs_A 59 SIRAVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC----GDSEGIACILGTGSN 121 (291)
T ss_dssp TCCEEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT----TTSCEEEEEESSSEE
T ss_pred cccEEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc----CCCCcEEEEecCChh
Confidence 3556889999764 222234555444 3455 47899999999998752 223444455676653
No 76
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=93.67 E-value=9 Score=41.13 Aligned_cols=183 Identities=19% Similarity=0.212 Sum_probs=91.6
Q ss_pred CcCcEEEEe-CCCCCHHHHHHH---HHHHHHcCCceEEEechhHHHHHHhccccCCCceEEEEeeCCceEEEEEEEEcCC
Q 047555 244 KITKAVVTV-PAYFNDSQRTAT---KDAGRIAGLEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEVGDG 319 (593)
Q Consensus 244 ~~~~~viTV-Pa~~~~~~r~~l---~~Aa~~AGl~~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~ 319 (593)
.++.+++|. |..++.- |--+ +..+...|++.+. |+.-+|=+++.......... +++-+.||++.+..+. ++
T Consensus 72 ~id~ia~~~gPG~~~~l-~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~~~~~~~p-~~l~vsGg~t~~~~~~--~~ 146 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSL-RVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKLTTEAEDP-LTLYVSGGNTQVIAYV--SK 146 (540)
T ss_dssp GCCEEEEEEESSCHHHH-HHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHHHSSCSSC-EEEEECSSCEEEEEEE--TT
T ss_pred HCcEEEEecCCCchhhH-HHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHHhcCCCCC-cEEEEcCCCcEEEEEe--CC
Confidence 455666665 6655433 2222 2234445666544 55555544443333222222 6666777888775554 57
Q ss_pred EEEEEEecCCCCccHHHHHHHHHHHHHHHhhhhhCCCCcCCHHHHHHHHHHHHHHhhhcCCCceeeEEeccccccCCCCc
Q 047555 320 VFEVLSTSGDTHLGGDDFDKRVVDWLAENFKRDEGVVLLNDKQALQRLTEAAEKAKMELSSLTQANISLPFITATADGPK 399 (593)
Q Consensus 320 ~~~vl~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~ 399 (593)
.++++....+..+ |+.||.. ...+ +.... ... .+...|.+.+. .+.+|..... .
T Consensus 147 ~~~~lg~t~d~s~-G~~~D~~-----a~~l----gl~~~-gg~---~ie~lA~~g~~--------~~~~p~~~~~----~ 200 (540)
T 3en9_A 147 KYRVFGETLDIAV-GNCLDQF-----ARYV----NLPHP-GGP---YIEELARKGKK--------LVDLPYTVKG----M 200 (540)
T ss_dssp EEEEEEEBSSSCH-HHHHHHH-----HHHT----TCCSS-CHH---HHHHHHHTCCC--------CCCCCCCEET----T
T ss_pred ceEEEeeccchHh-HHHHHHH-----HHHc----CCCCC-CHH---HHHHHHHcCCc--------cCcCCCCCCC----c
Confidence 8999988775544 5666642 2222 22211 111 22223322211 0111111000 0
Q ss_pred eeEE-------------EecHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHh
Q 047555 400 HIET-------------TLTRAKFEELCSD-LLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMT 462 (593)
Q Consensus 400 ~~~~-------------~itr~~~e~~~~~-~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~ 462 (593)
++++ ..+..++...|+. +++.+.+.+.++++..+ ++.|+|+||-+....|++.+++.+
T Consensus 201 ~~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~ 272 (540)
T 3en9_A 201 DIAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMC 272 (540)
T ss_dssp EECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHH
T ss_pred ceecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHH
Confidence 1100 0112333322222 34445555666666654 568999999999999999999977
No 77
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=93.18 E-value=3.2 Score=39.86 Aligned_cols=20 Identities=30% Similarity=0.463 Sum_probs=17.5
Q ss_pred eEEEEEcCccceEEEEEECC
Q 047555 113 KVVGIDLGTTNSAVAAMEGG 132 (593)
Q Consensus 113 ~vVGIDfGTt~s~va~~~~g 132 (593)
..++||+|+|+++.++++++
T Consensus 4 M~L~IDIGNT~ik~gl~~~~ 23 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDG 23 (249)
T ss_dssp EEEEEEECSSEEEEEEESSS
T ss_pred eEEEEEECCCeEEEEEEECC
Confidence 47999999999999998754
No 78
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=93.17 E-value=3.1 Score=43.34 Aligned_cols=43 Identities=16% Similarity=0.294 Sum_probs=29.6
Q ss_pred cCCceEEEechhHHHHHHhccc--cCCCceEEEEeeCCceEEEEEEE
Q 047555 271 AGLEVLRIINEPTAASLAYGFE--RKNNETILVFDLGGGTFDVSVLE 315 (593)
Q Consensus 271 AGl~~v~li~Ep~AAal~~~~~--~~~~~~vlVvD~GggT~Dvsv~~ 315 (593)
.|++ +.+.++..|+|++-... ....++++++-+|.| +-..++.
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv~ 252 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHG-LGAGIVL 252 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-EEEEEEE
Confidence 4765 68999999999875432 123567888888887 4455553
No 79
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=92.84 E-value=8.4 Score=38.40 Aligned_cols=48 Identities=31% Similarity=0.363 Sum_probs=32.8
Q ss_pred HHHcCCceEEEechhHHHHHHhccc------------cCCCceEEEEeeCCceEEEEEEEE
Q 047555 268 GRIAGLEVLRIINEPTAASLAYGFE------------RKNNETILVFDLGGGTFDVSVLEV 316 (593)
Q Consensus 268 a~~AGl~~v~li~Ep~AAal~~~~~------------~~~~~~vlVvD~GggT~Dvsv~~~ 316 (593)
.+..|++.+.+.|+..|+|++-... .+..++++++-+|-|- -..++.-
T Consensus 98 ~~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTGi-G~giv~~ 157 (332)
T 1sz2_A 98 KKNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGL-GVAHLVH 157 (332)
T ss_dssp HHHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSE-EEEEEEE
T ss_pred HHHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCccc-eEEEEec
Confidence 3445888789999999999976432 1234678888888873 4444443
No 80
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=91.70 E-value=1.7 Score=46.85 Aligned_cols=79 Identities=18% Similarity=0.127 Sum_probs=53.2
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCC-CCCCC-CCChhHHHhHHHHH
Q 047555 407 RAKFEELCSDL-LDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGK-DPNVT-VNPDEVVALGAAVQ 483 (593)
Q Consensus 407 r~~~e~~~~~~-~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~-~v~~~-~~p~~aVA~GAal~ 483 (593)
..++...++.. .+-+.+.+..+.+..+ ++.|+|.||.+....+.+.|.+..+. .+..+ .--|.++++|+|.+
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 44555555443 3344555555555544 67899999999999999999877653 22222 24478899999999
Q ss_pred hhhhcCC
Q 047555 484 GGVLAGD 490 (593)
Q Consensus 484 a~~l~~~ 490 (593)
+....|.
T Consensus 355 a~~~~g~ 361 (576)
T 3ven_A 355 VAVELGD 361 (576)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 8766553
No 81
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=91.62 E-value=9.8 Score=41.47 Aligned_cols=57 Identities=21% Similarity=0.353 Sum_probs=45.9
Q ss_pred EEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHH
Q 047555 402 ETTLTRAKFEELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVK 459 (593)
Q Consensus 402 ~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~ 459 (593)
.+.||..+++++.. .-..+..-++-+|+++++...+|+.|+|.||++..=-+.+.+.
T Consensus 499 ~i~itq~DIr~~ql-AKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 499 DIVITEADIQNLIR-AKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp CEEEEHHHHHHHHH-HHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred cEEEeHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 48999999997654 3445677788889999999999999999999998666666554
No 82
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=90.80 E-value=0.21 Score=53.34 Aligned_cols=72 Identities=10% Similarity=-0.044 Sum_probs=54.7
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhH-hCCCCCCCCCChhHHHhHHHHHhhhh
Q 047555 411 EELCSDLLDR--LKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKM-TGKDPNVTVNPDEVVALGAAVQGGVL 487 (593)
Q Consensus 411 e~~~~~~~~~--i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~-~g~~v~~~~~p~~aVA~GAal~a~~l 487 (593)
..+.+.+++. +.=.++..++.... .+.|.++||+++++.+.+.+.+. +|.++.+... .++.|+|||+.|+.-
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~~~-~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRPDCAVYTANA-HNDVSFGALRLIDPG 436 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHSTTSEEEEESS-CCCTTGGGHHHHCTT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcCCCeEEEcCC-CchHHHHHHHHhCcc
Confidence 4566666663 55555666665432 26899999999999999999999 9998876654 457899999998863
No 83
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=90.12 E-value=0.38 Score=48.08 Aligned_cols=38 Identities=16% Similarity=0.146 Sum_probs=25.9
Q ss_pred EechhHHHHHHhccccCCCceEEEEeeCCceEEEEEEEEc
Q 047555 278 IINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEVG 317 (593)
Q Consensus 278 li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~ 317 (593)
...-|.|.|...... .....+++|+|+.|||+..+.-+
T Consensus 110 aaanw~ASa~~~A~~--~~~~~llvDIGsTTTDIipi~~G 147 (334)
T 3cet_A 110 SASNWCGTAKWVSKN--IEENCILVDMGSTTTDIIPIVEG 147 (334)
T ss_dssp BCCSSHHHHHHHHHH--TCSSEEEEEECSSCEEEEEEETT
T ss_pred HhcCHHHHHHHHHHh--cCCCEEEEEcCcchhhhhhhcCC
Confidence 345676777633222 11357999999999999988733
No 84
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=84.02 E-value=1.7 Score=46.57 Aligned_cols=76 Identities=22% Similarity=0.254 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHcCCceEEEechhHHHHHHhcccc-CCCceEEEEeeCCceEEEEEEEEcCCEEEEEEecCCCCccHHHHH
Q 047555 260 QRTATKDAGRIAGLEVLRIINEPTAASLAYGFER-KNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFD 338 (593)
Q Consensus 260 ~r~~l~~Aa~~AGl~~v~li~Ep~AAal~~~~~~-~~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~~~~~~~lGG~~id 338 (593)
..+.+.++-+..|++.-.+--|-+|...+.+... -.....+|+|+|||+|.+++++- +.+ ....+.++|...+.
T Consensus 102 ~~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~--~~~---~~~~Sl~lG~vrl~ 176 (508)
T 3hi0_A 102 GPDFIREAEAILGCEIEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKD--KSC---GEGITLPLGGLRLS 176 (508)
T ss_dssp HHHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEET--TEE---CCCEEESCCHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeC--Cee---eeEEEecceEEehh
Confidence 4556666666789987544445555544443321 11234599999999999999873 221 12334688988887
Q ss_pred HH
Q 047555 339 KR 340 (593)
Q Consensus 339 ~~ 340 (593)
+.
T Consensus 177 e~ 178 (508)
T 3hi0_A 177 EQ 178 (508)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 85
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=82.51 E-value=11 Score=39.80 Aligned_cols=57 Identities=16% Similarity=0.127 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHcCCc--eEEEechhHHHHHHhccccCCCceEEEEeeCCceEEEEEEEE
Q 047555 258 DSQRTATKDAGRIAGLE--VLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEV 316 (593)
Q Consensus 258 ~~~r~~l~~Aa~~AGl~--~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~Dvsv~~~ 316 (593)
..-.+.++++.++-|++ ++.++|...|++++..+.. .+.++-+=+|-|+=-+.+.+.
T Consensus 185 ~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~--~~~~iglIlGTG~N~~y~e~~ 243 (485)
T 3o8m_A 185 HDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD--PQTKMGIIIGTGVNGAYYDVV 243 (485)
T ss_dssp SBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC--TTEEEEEEESSSEEEEEEEEG
T ss_pred ccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC--CCcEEEEEEecCcceEEEeec
Confidence 55688899999888885 4789999999999876653 455666667777655555543
No 86
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=80.43 E-value=4.6 Score=45.40 Aligned_cols=61 Identities=25% Similarity=0.414 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHh---CCCCCCCCC---ChhHHHhHHHHHhhh
Q 047555 421 LKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMT---GKDPNVTVN---PDEVVALGAAVQGGV 486 (593)
Q Consensus 421 i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~---g~~v~~~~~---p~~aVA~GAal~a~~ 486 (593)
+.+.+.++.++. .++.|+|+||.+....|.+.|.+.+ |.++..+.. -|..+|.|.|++|+.
T Consensus 693 L~~~~~~a~~~t-----g~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~ 759 (772)
T 4g9i_A 693 FAHTAVERAREF-----GVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGL 759 (772)
T ss_dssp HHHHHHHHHHTT-----TCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----CcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHH
Confidence 344444444443 3677999999999999999999887 455554432 378899999988764
No 87
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=79.71 E-value=3.9 Score=42.96 Aligned_cols=55 Identities=13% Similarity=0.073 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHcCCc--eEEEechhHHHHHHhccccCCCceEEEEeeCCceEEEEEEE
Q 047555 259 SQRTATKDAGRIAGLE--VLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLE 315 (593)
Q Consensus 259 ~~r~~l~~Aa~~AGl~--~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~Dvsv~~ 315 (593)
.-++.++++.++.|++ ++.++|...|++++-.+ ...+.++.+=+|-|+=-..+..
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~--~~~~~~iglilGTGvgg~~i~~ 220 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNY--TDAXIKMGIIFGSGVNAAYWCD 220 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHH--HCTTEEEEEEESSSEEEEEEEC
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhh--cCCccEEEEEECcEEEEEEEEC
Confidence 5577888888766764 58999999999998766 3345667777788754444444
No 88
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=78.43 E-value=4.7 Score=44.27 Aligned_cols=63 Identities=10% Similarity=0.091 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHh-CCCCCC---CCCChhHHHhHHHHHhhh
Q 047555 419 DRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMT-GKDPNV---TVNPDEVVALGAAVQGGV 486 (593)
Q Consensus 419 ~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~-g~~v~~---~~~p~~aVA~GAal~a~~ 486 (593)
+.+.+.+.++.+.. .++.|+|+||.++...|++.|.+.+ |.++.. ..--|.++|.|.++.|+.
T Consensus 585 ~~L~~~~~ra~~~~-----g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 585 QGFAALMREQATMR-----GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHTT-----TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-----CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 33444444444433 3678999999999999999999988 544433 233478899999988753
No 89
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=77.27 E-value=5.1 Score=44.89 Aligned_cols=50 Identities=22% Similarity=0.260 Sum_probs=39.0
Q ss_pred CCeEEEEeCCCChHhHHHHHHhHh---CCCCCCC---CCChhHHHhHHHHHhhhhc
Q 047555 439 LDEVILVGGSTRIPAVQELVKKMT---GKDPNVT---VNPDEVVALGAAVQGGVLA 488 (593)
Q Consensus 439 i~~VvLvGG~s~~p~l~~~l~~~~---g~~v~~~---~~p~~aVA~GAal~a~~l~ 488 (593)
++.|+|+||-++...|++.|.+.+ |.++..+ .--|.++|+|.|++|+...
T Consensus 694 ~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 694 INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 578999999999999999999887 4444332 2247889999999886543
No 90
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=74.92 E-value=54 Score=31.11 Aligned_cols=43 Identities=30% Similarity=0.379 Sum_probs=28.9
Q ss_pred cCCceEEEechhHHHHHHhccc---cCCCceEEEEeeCCceEEEEEEE
Q 047555 271 AGLEVLRIINEPTAASLAYGFE---RKNNETILVFDLGGGTFDVSVLE 315 (593)
Q Consensus 271 AGl~~v~li~Ep~AAal~~~~~---~~~~~~vlVvD~GggT~Dvsv~~ 315 (593)
.|++ +.+.|+..|+|++-... ....+.++++-+|.| +-..++.
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtG-IG~giv~ 159 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTG-IGSAFIF 159 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSS-EEEEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcc-eEEEEEE
Confidence 4776 68999999999975432 222235777888877 5555554
No 91
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=73.28 E-value=2.1 Score=34.65 Aligned_cols=19 Identities=26% Similarity=0.393 Sum_probs=16.8
Q ss_pred eEEEEEcCccceEEEEEEC
Q 047555 113 KVVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 113 ~vVGIDfGTt~s~va~~~~ 131 (593)
.++|||+|+..+++|+.+.
T Consensus 2 riLglD~G~kriGvAvsd~ 20 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEE 20 (98)
T ss_dssp CEEEEEESSSEEEEEEECS
T ss_pred cEEEEEeCCCEEEEEEEeC
Confidence 4899999999999998754
No 92
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=71.42 E-value=3.1 Score=35.98 Aligned_cols=22 Identities=23% Similarity=0.292 Sum_probs=19.0
Q ss_pred CCeEEEEEcCccceEEEEEECC
Q 047555 111 NEKVVGIDLGTTNSAVAAMEGG 132 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~g 132 (593)
++.++|||+|+..++||+.+..
T Consensus 2 ~~~iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 2 SGTLMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp CCEEEEEECCSSEEEEEEEETT
T ss_pred CCeEEEEEeCCCEEEEEEEcCC
Confidence 3479999999999999998764
No 93
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=69.67 E-value=3 Score=44.58 Aligned_cols=21 Identities=24% Similarity=0.283 Sum_probs=18.8
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 047555 111 NEKVVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~ 131 (593)
|..++|||+|||++++++++.
T Consensus 4 m~~~lgIDiGtts~k~~l~d~ 24 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADR 24 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECT
T ss_pred ccEEEEEEeCCCceEEEEECC
Confidence 568999999999999999854
No 94
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=69.16 E-value=3.1 Score=44.45 Aligned_cols=21 Identities=24% Similarity=0.381 Sum_probs=18.7
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 047555 111 NEKVVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~ 131 (593)
|..++|||+|||++++++++.
T Consensus 3 m~~~lgIDiGtts~K~~l~d~ 23 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYDI 23 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEecCCceEEEEEcC
Confidence 468999999999999999864
No 95
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=68.42 E-value=43 Score=32.48 Aligned_cols=69 Identities=14% Similarity=0.102 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCC------CCCCCCChhHHHhHHHHHhhh
Q 047555 413 LCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKD------PNVTVNPDEVVALGAAVQGGV 486 (593)
Q Consensus 413 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~------v~~~~~p~~aVA~GAal~a~~ 486 (593)
+++...+.+...+..++.-. +++.|+|.||.+..+.+.+.|++.+... +....-...+.++||+.++..
T Consensus 217 ~~~~~~~~La~~i~~l~~~~-----~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 217 LITEFYTGICTGLYNLIYLF-----DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-----CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 33333344444444444432 3677999999988888888888877422 222334567899999987653
No 96
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=67.52 E-value=26 Score=35.47 Aligned_cols=20 Identities=35% Similarity=0.488 Sum_probs=18.2
Q ss_pred CCeEEEEEcCccceEEEEEE
Q 047555 111 NEKVVGIDLGTTNSAVAAME 130 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~ 130 (593)
...++|||+|.|++.+++.+
T Consensus 8 ~~~~lgiDIGgt~i~~~l~d 27 (366)
T 3mcp_A 8 NRIVMTLDAGGTNFVFSAIQ 27 (366)
T ss_dssp CCEEEEEECSSSEEEEEEEE
T ss_pred CCEEEEEEECcceEEEEEEE
Confidence 56899999999999999877
No 97
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=66.55 E-value=4 Score=44.13 Aligned_cols=21 Identities=19% Similarity=0.433 Sum_probs=18.8
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 047555 111 NEKVVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~ 131 (593)
+..++|||+|||++++++++.
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~ 24 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDL 24 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CcEEEEEEECcccEEEEEECC
Confidence 568999999999999999864
No 98
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=66.31 E-value=8.4 Score=38.96 Aligned_cols=20 Identities=25% Similarity=0.531 Sum_probs=17.4
Q ss_pred CceEEEEeeCCceEEEEEEE
Q 047555 296 NETILVFDLGGGTFDVSVLE 315 (593)
Q Consensus 296 ~~~vlVvD~GggT~Dvsv~~ 315 (593)
.+.++|+|+|||+|.+++..
T Consensus 139 ~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 139 NKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp SSCEEEEEECSSEEEEEEEC
T ss_pred cccEEEEEeCCCceEEEEec
Confidence 35699999999999999874
No 99
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=65.94 E-value=11 Score=38.19 Aligned_cols=67 Identities=19% Similarity=0.242 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhC-CCCCC----CCCChhHHHhHHHHHhhh
Q 047555 417 LLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTG-KDPNV----TVNPDEVVALGAAVQGGV 486 (593)
Q Consensus 417 ~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g-~~v~~----~~~p~~aVA~GAal~a~~ 486 (593)
+.+=+...|.+.++... ..++.|+++||+++.|.|.++|++.++ .++.. ..+|+.-=|..-|++|..
T Consensus 265 Lt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~ 336 (371)
T 3qbx_A 265 LLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHH
Confidence 33333444444444432 136789999999999999999999984 33322 223443334445666544
No 100
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=64.85 E-value=1.1e+02 Score=31.90 Aligned_cols=57 Identities=11% Similarity=0.123 Sum_probs=40.5
Q ss_pred CHHHHHHHHHHHHHcCCc--eEEEechhHHHHHHhccccCCCceEEEEeeCCceEEEEEEE
Q 047555 257 NDSQRTATKDAGRIAGLE--VLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLE 315 (593)
Q Consensus 257 ~~~~r~~l~~Aa~~AGl~--~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~Dvsv~~ 315 (593)
...-.+.++++.++.|++ ++.++|...|++++..+.. .+.++-+=+|-|+=-..+..
T Consensus 171 g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~--~~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 171 GHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED--PKCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp TSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC--TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC--CCcEEEEEEeCCcceEEEEc
Confidence 356688888998877875 3589999999999877663 34666666787754444443
No 101
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=64.62 E-value=3.5 Score=43.70 Aligned_cols=21 Identities=24% Similarity=0.389 Sum_probs=18.3
Q ss_pred CCCeEEEEEcCccceEEEEEE
Q 047555 110 VNEKVVGIDLGTTNSAVAAME 130 (593)
Q Consensus 110 ~~~~vVGIDfGTt~s~va~~~ 130 (593)
++..++|||+|||++++++++
T Consensus 2 ~~~~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 2 TFRNCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp CCEEEEEEEECSSEEEEEEEE
T ss_pred CcceEEEEEecCCCceEEEEE
Confidence 356799999999999999885
No 102
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=62.14 E-value=40 Score=32.96 Aligned_cols=43 Identities=14% Similarity=0.187 Sum_probs=29.0
Q ss_pred cCCceEEEechhHHHHHHhccc--cCCCceEEEEeeCCceEEEEEEE
Q 047555 271 AGLEVLRIINEPTAASLAYGFE--RKNNETILVFDLGGGTFDVSVLE 315 (593)
Q Consensus 271 AGl~~v~li~Ep~AAal~~~~~--~~~~~~vlVvD~GggT~Dvsv~~ 315 (593)
.|++ +.+.++..|+|++-... .+..++++++-+|-| +-..++.
T Consensus 97 ~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG-iG~gii~ 141 (302)
T 3epq_A 97 MXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG-IGAGAIV 141 (302)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEE
Confidence 4776 68999999999875443 233567888888866 4444443
No 103
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=61.77 E-value=5.9 Score=42.22 Aligned_cols=21 Identities=33% Similarity=0.447 Sum_probs=18.7
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 047555 111 NEKVVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~ 131 (593)
+..++|||+|||++++++++.
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~ 24 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDR 24 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEcCCCceEEEEECC
Confidence 568999999999999999864
No 104
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=61.27 E-value=6.1 Score=42.23 Aligned_cols=20 Identities=25% Similarity=0.388 Sum_probs=18.4
Q ss_pred CCeEEEEEcCccceEEEEEE
Q 047555 111 NEKVVGIDLGTTNSAVAAME 130 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~ 130 (593)
+..++|||+|||++++++++
T Consensus 4 ~~~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEE
T ss_pred CcEEEEEEeccccEEEEEEE
Confidence 56899999999999999997
No 105
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=61.07 E-value=18 Score=35.27 Aligned_cols=43 Identities=23% Similarity=0.408 Sum_probs=29.2
Q ss_pred cCCceEEEechhHHHHHHhccc--cCCCceEEEEeeCCceEEEEEEE
Q 047555 271 AGLEVLRIINEPTAASLAYGFE--RKNNETILVFDLGGGTFDVSVLE 315 (593)
Q Consensus 271 AGl~~v~li~Ep~AAal~~~~~--~~~~~~vlVvD~GggT~Dvsv~~ 315 (593)
.|++ +.+.++..|+|++-... .+..++++++-+|.| +-..++.
T Consensus 97 ~~~p-V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~giv~ 141 (297)
T 4htl_A 97 TGLP-VAIENDANCALLAEKWLGKGQDLDDFLCLTIGTG-IGGGIFS 141 (297)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEE
T ss_pred HCcC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcc-eEEEEEE
Confidence 4776 68999999999875432 223567888888877 4444443
No 106
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=60.90 E-value=23 Score=40.74 Aligned_cols=57 Identities=16% Similarity=0.243 Sum_probs=39.6
Q ss_pred CHHHHHHHHHHHHHc-CC--ceEEEechhHHHHHHhccccCCCceEEEEeeCCceEEEEEEE
Q 047555 257 NDSQRTATKDAGRIA-GL--EVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLE 315 (593)
Q Consensus 257 ~~~~r~~l~~Aa~~A-Gl--~~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~Dvsv~~ 315 (593)
...-.+.++++..+- ++ +++.++|...|++++..+.. ...++-+=+|-|+=-..+..
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~--~~~~iglIlGTG~na~y~e~ 689 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE--PTCEVGLIVGTGSNACYMEE 689 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC--TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC--CCcEEEEEEeCCeeEEEEEc
Confidence 455678888887654 44 68999999999999876653 34566666777755444443
No 107
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=60.55 E-value=6.1 Score=42.48 Aligned_cols=21 Identities=24% Similarity=0.384 Sum_probs=18.8
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 047555 111 NEKVVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~ 131 (593)
+..++|||+|||.+++++++.
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~ 29 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDA 29 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEEcCcCEEEEEECC
Confidence 568999999999999999864
No 108
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=60.41 E-value=5 Score=43.51 Aligned_cols=21 Identities=19% Similarity=0.423 Sum_probs=18.2
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 047555 111 NEKVVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~ 131 (593)
+..++|||+|||++++++++.
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEecCCcceEEEEEEC
Confidence 468999999999999999864
No 109
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=59.94 E-value=4.6 Score=42.81 Aligned_cols=21 Identities=33% Similarity=0.325 Sum_probs=16.6
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 047555 111 NEKVVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~ 131 (593)
|..++|||+|||++++++++.
T Consensus 5 m~~~lgIDiGTts~Ka~l~d~ 25 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWDL 25 (482)
T ss_dssp ---CEEEEECSSEEEEEEECT
T ss_pred hceEEEEEcCCCCeEEEEEEC
Confidence 568999999999999999853
No 110
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=59.86 E-value=5.8 Score=42.52 Aligned_cols=21 Identities=33% Similarity=0.521 Sum_probs=18.4
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 047555 111 NEKVVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~ 131 (593)
+.+++|||+|||.+++++++.
T Consensus 3 kkYvlgID~GTss~Ka~l~d~ 23 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVMDH 23 (526)
T ss_dssp CCEEEEEEECSSEEEEEEECT
T ss_pred ceEEEEEEccccceeeeEEcC
Confidence 468999999999999998853
No 111
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=59.81 E-value=65 Score=33.56 Aligned_cols=49 Identities=20% Similarity=0.259 Sum_probs=30.1
Q ss_pred CceEEEEeeCCceEEEEEEEEcC--------------CEEEEEEecCCCCccHHHHHHHHHHHH
Q 047555 296 NETILVFDLGGGTFDVSVLEVGD--------------GVFEVLSTSGDTHLGGDDFDKRVVDWL 345 (593)
Q Consensus 296 ~~~vlVvD~GggT~Dvsv~~~~~--------------~~~~vl~~~~~~~lGG~~id~~l~~~l 345 (593)
...++|+|+|||++.++...-.. ..+.+-..+. ..+|-+..-+++...+
T Consensus 189 ~~t~gvlDlGGgStqi~~~~~~~~~~~~~~~~l~l~g~~y~lY~hS~-LgyG~~~Ar~~~l~~l 251 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFETTSPSEDPGNEVHLRLYGQHYRVYTHSF-LCYGRDQILLRLLASA 251 (456)
T ss_dssp CCCCEEEEECSSEEEEEEECCSCCSCGGGEEEEEETTEEEEEEEEEE-ETCSHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCceEEEeccCCccCCCCceEEEEeCCeeEEEEEEec-ccchHHHHHHHHHHHH
Confidence 45689999999999999764321 1333444443 5567665554444443
No 112
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=59.45 E-value=6.4 Score=41.99 Aligned_cols=21 Identities=29% Similarity=0.550 Sum_probs=18.2
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 047555 111 NEKVVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~ 131 (593)
+..++|||+|||++++++++.
T Consensus 6 ~~~~lgIDiGtts~k~~l~d~ 26 (508)
T 3ifr_A 6 GRQVIGLDIGTTSTIAILVRL 26 (508)
T ss_dssp -CEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEecCcceEEEEECC
Confidence 468999999999999999864
No 113
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=59.10 E-value=5.2 Score=35.08 Aligned_cols=19 Identities=37% Similarity=0.683 Sum_probs=17.0
Q ss_pred eEEEEEcCccceEEEEEEC
Q 047555 113 KVVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 113 ~vVGIDfGTt~s~va~~~~ 131 (593)
.++|||+|+..|++|+.+.
T Consensus 4 riLGiDpG~~riGvAv~d~ 22 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDE 22 (150)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEEccCCEEEEEEEEC
Confidence 6999999999999998754
No 114
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=58.74 E-value=6.4 Score=41.98 Aligned_cols=21 Identities=33% Similarity=0.521 Sum_probs=18.6
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 047555 111 NEKVVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~ 131 (593)
+..++|||+|||++++++++.
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~ 22 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDH 22 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECT
T ss_pred CcEEEEEEcCCcceEEEEECC
Confidence 568999999999999999854
No 115
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=58.14 E-value=14 Score=35.67 Aligned_cols=68 Identities=16% Similarity=0.137 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCC-------CCCCCCChhHHHhHHHHHh
Q 047555 412 ELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKD-------PNVTVNPDEVVALGAAVQG 484 (593)
Q Consensus 412 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~-------v~~~~~p~~aVA~GAal~a 484 (593)
++++...+.+...+..++... +++.|+|.||.+..+.+.+.+++.+... +........+.++||+.++
T Consensus 212 ~i~~~~~~~L~~~i~~l~~~l-----~p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 212 QLIHRSARTLARLIADIKATT-----DCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----CCSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc-----CCCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 334444444444444444443 3567999998876688888888776432 1223344568899999875
No 116
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=57.03 E-value=1.6e+02 Score=30.48 Aligned_cols=57 Identities=19% Similarity=0.274 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHcC---CceEEEechhHHHHHHhccccCCCceEEEEeeCCceEEEEEEEE
Q 047555 258 DSQRTATKDAGRIAG---LEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEV 316 (593)
Q Consensus 258 ~~~r~~l~~Aa~~AG---l~~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~Dvsv~~~ 316 (593)
..-.+.+++|.++-| ++++.++|...|+.++..+.. ....+-+=+|-||=-+.+.++
T Consensus 160 ~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~--~~~~iglIlGTGtNa~y~e~~ 219 (445)
T 3hm8_A 160 QDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED--PRCEIGLIVGTGTNACYMEEL 219 (445)
T ss_dssp SBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC--TTEEEEEEESSSEEEEEEEEG
T ss_pred CcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC--CCceEEEEEeCCceEEEEEec
Confidence 445778888887753 578999999999999876653 345555556777544444333
No 117
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=56.94 E-value=7 Score=37.83 Aligned_cols=70 Identities=14% Similarity=0.195 Sum_probs=38.2
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--CCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHH
Q 047555 405 LTRAKFEELCSDLLDRLKKPVETALRDAKLS--FNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAV 482 (593)
Q Consensus 405 itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal 482 (593)
+-++..+.+-.-++......|+..+++.... ...--.|+++||.+.+ +.+. +.....+|+ -+-.|..+
T Consensus 182 ~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~~~~~~~~vi~TGG~a~~--l~~~-------~~~~~~~~~-LvL~GL~~ 251 (266)
T 3djc_A 182 VGRSTIESIQSGVYYGVLGACKELIQRIHHEAFNGDQILILATGGFASL--FDKQ-------GLYDHLVPD-LVLQGIRL 251 (266)
T ss_dssp CBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEEESTTGGG--GTTT-------TCCSEECTT-HHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEECCChHH--hccC-------CCCCEECcC-hHHHHHHH
Confidence 3445556666666666666666666543321 1122469999999852 2222 111234554 56777766
Q ss_pred Hh
Q 047555 483 QG 484 (593)
Q Consensus 483 ~a 484 (593)
..
T Consensus 252 i~ 253 (266)
T 3djc_A 252 AA 253 (266)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 118
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=56.47 E-value=7.1 Score=41.52 Aligned_cols=21 Identities=19% Similarity=0.237 Sum_probs=18.3
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 047555 111 NEKVVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~ 131 (593)
|..++|||+|||++++++++.
T Consensus 3 m~~~lgIDiGtT~~k~~l~d~ 23 (503)
T 2w40_A 3 MNVILSIDQSTQSTKVFFYDE 23 (503)
T ss_dssp CEEEEEEEECSSEEEEEEEET
T ss_pred ccEEEEEEeCCcceEEEEECC
Confidence 347899999999999999864
No 119
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=55.44 E-value=1.6e+02 Score=30.72 Aligned_cols=57 Identities=18% Similarity=0.275 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHcC---CceEEEechhHHHHHHhccccCCCceEEEEeeCCceEEEEEEEE
Q 047555 258 DSQRTATKDAGRIAG---LEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEV 316 (593)
Q Consensus 258 ~~~r~~l~~Aa~~AG---l~~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~Dvsv~~~ 316 (593)
..-.+.+++|+++-| ++++.++|..+|..++..+... ...+-+=+|-||=-+.+-+.
T Consensus 184 ~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~~--~~~iGlI~GTGtNa~Y~E~~ 243 (470)
T 3f9m_A 184 NNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDH--QCEVGMIVGTGCNACYMEEM 243 (470)
T ss_dssp SBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTCT--TEEEEEEESSSEEEEEEEEG
T ss_pred ccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCCC--CceEEEEEecCCceEEeeec
Confidence 456888899988877 4788999999999888766543 45555556777554433333
No 120
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=55.17 E-value=6.8 Score=41.58 Aligned_cols=20 Identities=25% Similarity=0.268 Sum_probs=17.2
Q ss_pred CeEEEEEcCccceEEEEEEC
Q 047555 112 EKVVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 112 ~~vVGIDfGTt~s~va~~~~ 131 (593)
..++|||+|||++++++++.
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~ 21 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTL 21 (495)
T ss_dssp -CEEEEEECSSEEEEEEECT
T ss_pred cEEEEEeeCCcceEEEEECC
Confidence 46899999999999999854
No 121
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=54.87 E-value=24 Score=35.69 Aligned_cols=48 Identities=15% Similarity=0.218 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhC
Q 047555 412 ELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTG 463 (593)
Q Consensus 412 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g 463 (593)
++..-+.+=+...|.+.++... ..+.|+++||+++.|.|.++|++.+.
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~ 314 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLP 314 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCC
Confidence 3333344444445555554432 35689999999999999999999984
No 122
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=54.52 E-value=15 Score=32.44 Aligned_cols=19 Identities=21% Similarity=0.455 Sum_probs=16.7
Q ss_pred CeEEEEEcCccceEEEEEE
Q 047555 112 EKVVGIDLGTTNSAVAAME 130 (593)
Q Consensus 112 ~~vVGIDfGTt~s~va~~~ 130 (593)
+.|+|||-|+++++.++.+
T Consensus 1 m~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccCCCCeeEEEEE
Confidence 3689999999999999874
No 123
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=52.69 E-value=9 Score=40.64 Aligned_cols=21 Identities=24% Similarity=0.381 Sum_probs=18.2
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 047555 111 NEKVVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~ 131 (593)
+..++|||+|||++++++++.
T Consensus 2 ~~~~lgiDiGtt~~k~~l~d~ 22 (497)
T 2zf5_O 2 EKFVLSLDEGTTSARAIIFDR 22 (497)
T ss_dssp CCEEEEEEECSSEEEEEEECT
T ss_pred CcEEEEEecCCchhEEEEECC
Confidence 347999999999999999854
No 124
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=50.84 E-value=9.9 Score=40.38 Aligned_cols=20 Identities=30% Similarity=0.421 Sum_probs=17.9
Q ss_pred CeEEEEEcCccceEEEEEEC
Q 047555 112 EKVVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 112 ~~vVGIDfGTt~s~va~~~~ 131 (593)
..++|||+|||++++++++.
T Consensus 6 ~~~lgIDiGtts~k~~l~d~ 25 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQ 25 (501)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEEeCccceEEEEEcC
Confidence 48999999999999999854
No 125
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=49.95 E-value=9.3 Score=37.38 Aligned_cols=22 Identities=27% Similarity=0.330 Sum_probs=17.5
Q ss_pred CCeEEEEEcCccceEEEEEECC
Q 047555 111 NEKVVGIDLGTTNSAVAAMEGG 132 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~g 132 (593)
....+|||+|+|.+++++.+++
T Consensus 19 ~~~~iGIDiGsTt~K~V~~~~~ 40 (287)
T 2ews_A 19 SHMKVGIDAGGTLIKIVQEQDN 40 (287)
T ss_dssp --CEEEEEECSSEEEEEEECSS
T ss_pred CCeEEEEEEChhhEEEEEEcCC
Confidence 3578999999999999987543
No 126
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=49.26 E-value=11 Score=40.37 Aligned_cols=20 Identities=30% Similarity=0.556 Sum_probs=17.8
Q ss_pred CeEEEEEcCccceEEEEEEC
Q 047555 112 EKVVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 112 ~~vVGIDfGTt~s~va~~~~ 131 (593)
..++|||+|||++++++++.
T Consensus 26 ~~~lgIDiGtts~k~~l~d~ 45 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFDG 45 (520)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred CeEEEEEeCCcceEEEEECC
Confidence 47999999999999999853
No 127
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=47.74 E-value=35 Score=34.59 Aligned_cols=69 Identities=14% Similarity=0.069 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHh-HHHHHHhHhCCC----CCCCCCChhHHHhHHHHHhh
Q 047555 414 CSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPA-VQELVKKMTGKD----PNVTVNPDEVVALGAAVQGG 485 (593)
Q Consensus 414 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~-l~~~l~~~~g~~----v~~~~~p~~aVA~GAal~a~ 485 (593)
++.....+...+...+... ..+++.|+|.||.+.... +.+.|++.+... +........+.+.||+..+.
T Consensus 274 l~~~~~~la~~i~~l~~~l---~~~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 274 YRAMAYQIAKWIGKMAAVL---KGEVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TTCCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHh---cCCCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 3333333444444444333 135789999999986543 778888777432 11122333589999998754
No 128
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=46.32 E-value=20 Score=31.94 Aligned_cols=19 Identities=32% Similarity=0.438 Sum_probs=16.7
Q ss_pred CeEEEEEcCccceEEEEEE
Q 047555 112 EKVVGIDLGTTNSAVAAME 130 (593)
Q Consensus 112 ~~vVGIDfGTt~s~va~~~ 130 (593)
+.|+|||-|+++++.++.+
T Consensus 1 MrILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccccCceEEEEEE
Confidence 3689999999999999864
No 129
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=44.65 E-value=1.8e+02 Score=33.29 Aligned_cols=56 Identities=14% Similarity=0.298 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHcC-C--ceEEEechhHHHHHHhccccCCCceEEEEeeCCceEEEEEEEE
Q 047555 258 DSQRTATKDAGRIAG-L--EVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEV 316 (593)
Q Consensus 258 ~~~r~~l~~Aa~~AG-l--~~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT~Dvsv~~~ 316 (593)
..-++.+.++..+.| + ..+.++|...|++++-.+. ..+.++.+=+|-|+= .+++.-
T Consensus 183 ~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~--~~~~~iglilGTGvn-gg~i~~ 241 (917)
T 1cza_N 183 ADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYD--DQHCEVGLIIGTGTN-ACYMEE 241 (917)
T ss_dssp SBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHH--CTTEEEEEEESSSEE-EEEEEE
T ss_pred CchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhcc--CCCcEEEEEEECCcc-eEEEec
Confidence 356777888877666 5 4789999999999987665 345667777787743 344443
No 130
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=44.24 E-value=65 Score=33.54 Aligned_cols=89 Identities=15% Similarity=0.178 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHhC---CCcCcEEEEeCCCCC------HHHHHHHHHHHH-Hc---CC--ceEEEechhHHHHHHh--
Q 047555 227 AQVLRKLVDDASKFLN---DKITKAVVTVPAYFN------DSQRTATKDAGR-IA---GL--EVLRIINEPTAASLAY-- 289 (593)
Q Consensus 227 ~~~L~~l~~~a~~~l~---~~~~~~viTVPa~~~------~~~r~~l~~Aa~-~A---Gl--~~v~li~Ep~AAal~~-- 289 (593)
+..|+.|++.+.+.+. ...+.+.+---|..- ..+++.+.++++ .. ++ ..+++++-.+=+.+++
T Consensus 88 ~~~l~~Ll~~a~~~vp~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~ 167 (452)
T 3zx3_A 88 AAYLAECMKMSTERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWIT 167 (452)
T ss_dssp HHHHHHHHHHHHHHSCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHH
Confidence 3566666666665432 122345443333321 112333333333 22 55 4578887555444433
Q ss_pred ---cccc---CCCceEEEEeeCCceEEEEEEE
Q 047555 290 ---GFER---KNNETILVFDLGGGTFDVSVLE 315 (593)
Q Consensus 290 ---~~~~---~~~~~vlVvD~GggT~Dvsv~~ 315 (593)
+... .....+.++|+|||++.++...
T Consensus 168 vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 168 INYLLGRFKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp HHHHTTTTC---CCCCEEEEECSSEEEEEECC
T ss_pred HHhhhccccCCCCCceEEEecCCCceEEEecc
Confidence 2221 1235788999999999998654
No 131
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=41.52 E-value=15 Score=38.72 Aligned_cols=18 Identities=39% Similarity=0.652 Sum_probs=16.2
Q ss_pred EEEEEcCccceEEEEEEC
Q 047555 114 VVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 114 vVGIDfGTt~s~va~~~~ 131 (593)
++|||+|||++++++++.
T Consensus 2 ~lgiDiGtt~~k~~l~d~ 19 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNE 19 (484)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEecCcccEEEEECC
Confidence 689999999999999853
No 132
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=41.28 E-value=16 Score=38.69 Aligned_cols=19 Identities=37% Similarity=0.476 Sum_probs=17.2
Q ss_pred eEEEEEcCccceEEEEEEC
Q 047555 113 KVVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 113 ~vVGIDfGTt~s~va~~~~ 131 (593)
.++|||+|||++++++++.
T Consensus 3 ~~lgiDiGtts~k~~l~d~ 21 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDH 21 (504)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEecCCcceEEEEECC
Confidence 6899999999999999854
No 133
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=40.68 E-value=76 Score=33.32 Aligned_cols=52 Identities=21% Similarity=0.408 Sum_probs=33.0
Q ss_pred CceEEEEeeCCceEEEEEEEEcCC-EEEEEE----ecCCCCcc-HHHHHHHHHHHHHH
Q 047555 296 NETILVFDLGGGTFDVSVLEVGDG-VFEVLS----TSGDTHLG-GDDFDKRVVDWLAE 347 (593)
Q Consensus 296 ~~~vlVvD~GggT~Dvsv~~~~~~-~~~vl~----~~~~~~lG-G~~id~~l~~~l~~ 347 (593)
...+|.+|+||.++-+.++++.+. .+++.. .......| |.++=..+++.+.+
T Consensus 79 ~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~i~~ 136 (485)
T 3o8m_A 79 TGDFLALDLGGTNLRVVLVKLGGNHDFDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKE 136 (485)
T ss_dssp EEEEEEEEESSSEEEEEEEEEESSSCEEEEEEEEECCTTGGGSBHHHHHHHHHHHHHH
T ss_pred ceEEEEEEecCCeEEEEEEEECCCCceEEEEEEEecCchhccCCHHHHHHHHHHHHHH
Confidence 457999999999999999998754 333332 22333334 55555555554444
No 134
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=37.78 E-value=71 Score=31.16 Aligned_cols=67 Identities=24% Similarity=0.266 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCCh-----HhHHHHHHhHhCCC-------CCCCCCChhHHHhHHHH
Q 047555 415 SDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRI-----PAVQELVKKMTGKD-------PNVTVNPDEVVALGAAV 482 (593)
Q Consensus 415 ~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~-----p~l~~~l~~~~g~~-------v~~~~~p~~aVA~GAal 482 (593)
..+++.+...+..++.- -+++.|+|-||.+.. +.+++.+++.+... +....-...+.++|||.
T Consensus 221 ~~~~~~~a~~la~l~~~-----~dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~ 295 (310)
T 3htv_A 221 QSLLENAARAIATSINL-----FDPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAI 295 (310)
T ss_dssp HHHHHHHHHHHHHHHHH-----HCCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-----hCCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHH
Confidence 33344444444444433 246778988888765 35666776665211 11222346789999998
Q ss_pred Hhhh
Q 047555 483 QGGV 486 (593)
Q Consensus 483 ~a~~ 486 (593)
++..
T Consensus 296 la~~ 299 (310)
T 3htv_A 296 LAHQ 299 (310)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7643
No 135
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=36.88 E-value=15 Score=39.18 Aligned_cols=32 Identities=9% Similarity=-0.024 Sum_probs=26.1
Q ss_pred cEEEEeCCCCCHHHHHHHHHHHHHcCCceEEE
Q 047555 247 KAVVTVPAYFNDSQRTATKDAGRIAGLEVLRI 278 (593)
Q Consensus 247 ~~viTVPa~~~~~~r~~l~~Aa~~AGl~~v~l 278 (593)
.++.-+|..++...-.++.+++...|++....
T Consensus 132 ~~I~v~~~~i~~~d~a~~in~a~~~g~~i~~~ 163 (607)
T 1nbw_A 132 GWIVLIDDAVDFLDAVWWLNEALDRGINVVAA 163 (607)
T ss_dssp CEEEEECSSSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEECCCccCHHHHHHHHHHHHHcCCcEEEE
Confidence 45555899999999999999999999866543
No 136
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=35.63 E-value=84 Score=30.53 Aligned_cols=21 Identities=29% Similarity=0.265 Sum_probs=17.6
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 047555 111 NEKVVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~ 131 (593)
+..++|||+|.|++++++.+.
T Consensus 2 ~~~~lgiDiGgt~i~~~l~d~ 22 (302)
T 3epq_A 2 NAMLGGIEAGGTXFVCAVGRE 22 (302)
T ss_dssp -CCEEEEEECSSEEEEEEECT
T ss_pred CcEEEEEEECcceeEEEEEEC
Confidence 357899999999999998853
No 137
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=34.31 E-value=1.4e+02 Score=30.95 Aligned_cols=54 Identities=13% Similarity=0.144 Sum_probs=34.5
Q ss_pred CCceEEEEeeCCceEEEEEEEEcCCE---EEEEEecCCCCc---cHHHHHHHHHHHHHHH
Q 047555 295 NNETILVFDLGGGTFDVSVLEVGDGV---FEVLSTSGDTHL---GGDDFDKRVVDWLAEN 348 (593)
Q Consensus 295 ~~~~vlVvD~GggT~Dvsv~~~~~~~---~~vl~~~~~~~l---GG~~id~~l~~~l~~~ 348 (593)
+...++.+|+||.++-+.++...+.. ++.......... ++..+-..+.+.+.+.
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~ 118 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAF 118 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHH
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHH
Confidence 35678999999999999999987654 222222222232 5666655666655543
No 138
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=32.94 E-value=79 Score=34.39 Aligned_cols=44 Identities=11% Similarity=0.218 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhH
Q 047555 411 EELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAV 454 (593)
Q Consensus 411 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l 454 (593)
+++-+-+++.+.+++.+++.++++...+|..++++|-++..-.+
T Consensus 262 ~~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M~hLl 305 (631)
T 3zyy_X 262 EKLRKAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTMTHLF 305 (631)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHHHHHH
Confidence 34445566778888888999999998999999999977654433
No 139
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=32.17 E-value=31 Score=33.19 Aligned_cols=71 Identities=18% Similarity=0.163 Sum_probs=38.1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhh
Q 047555 406 TRAKFEELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGG 485 (593)
Q Consensus 406 tr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~ 485 (593)
-++..+.+-.-++......|+..+++.......--.|+++||.+. .|.+. +. .....+|+ -+-.|..+...
T Consensus 181 g~nT~~ai~sGi~~g~~g~i~~~i~~~~~e~~~~~~vi~TGG~a~--~l~~~----~~--~~~~~~~~-LvL~GL~~i~~ 251 (268)
T 2h3g_X 181 GKNTVSAMQSGILYGYVGQVEGIVKRMKEEAKQEPKVIATGGLAK--LISEE----SN--VIDVVDPF-LTLKGLYMLYE 251 (268)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCEEEEESTTHH--HHHHH----CS--SCSEECTT-HHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCHH--HHHhh----CC--CCCEECcc-hHHHHHHHHHH
Confidence 344555566666666666666555543211112346999999864 44443 32 22234554 45667766544
No 140
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=30.81 E-value=1e+02 Score=30.41 Aligned_cols=43 Identities=21% Similarity=0.198 Sum_probs=29.3
Q ss_pred cCCceEEEechhHHHHHHhccc--cCCCceEEEEeeCCceEEEEEEE
Q 047555 271 AGLEVLRIINEPTAASLAYGFE--RKNNETILVFDLGGGTFDVSVLE 315 (593)
Q Consensus 271 AGl~~v~li~Ep~AAal~~~~~--~~~~~~vlVvD~GggT~Dvsv~~ 315 (593)
.|++ +.+.++..|+|++-... .....+++++-+|.| +-..++.
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii~ 175 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGIIH 175 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEEE
Confidence 3665 68999999999875432 123467888888887 4455553
No 141
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=30.47 E-value=41 Score=34.07 Aligned_cols=21 Identities=19% Similarity=0.409 Sum_probs=18.8
Q ss_pred CeEEEEEcCccceEEEEEECC
Q 047555 112 EKVVGIDLGTTNSAVAAMEGG 132 (593)
Q Consensus 112 ~~vVGIDfGTt~s~va~~~~g 132 (593)
+.++|||+|.|++++++++.+
T Consensus 2 ~~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CeEEEEECCccceeEEEEecc
Confidence 479999999999999998765
No 142
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=29.74 E-value=11 Score=36.62 Aligned_cols=46 Identities=9% Similarity=-0.026 Sum_probs=30.1
Q ss_pred CCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhh
Q 047555 438 DLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGG 485 (593)
Q Consensus 438 ~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~ 485 (593)
++..|+|.||-+.. +.+.|++.+..+......+..+.+.||++++.
T Consensus 232 ~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 232 KQYPVHFIGSIAYC--YKEILQDAARQTGIQIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp TTSCEEECSHHHHH--THHHHHHHTTTTTCCEEEECSCTHHHHHTTSS
T ss_pred CCceEEEECcHHHH--HHHHHHHHHhcCCcEEeecCCCHHHHHHHHHH
Confidence 56789999988765 56666666643211222345677899998764
No 143
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=29.29 E-value=49 Score=25.83 Aligned_cols=28 Identities=18% Similarity=0.270 Sum_probs=25.3
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCce
Q 047555 248 AVVTVPAYFNDSQRTATKDAGRIAGLEV 275 (593)
Q Consensus 248 ~viTVPa~~~~~~r~~l~~Aa~~AGl~~ 275 (593)
-.++.|+.++..+|..+.+.|+..||..
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 3678999999999999999999999954
No 144
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=28.54 E-value=1.2e+02 Score=23.69 Aligned_cols=75 Identities=13% Similarity=0.111 Sum_probs=50.4
Q ss_pred ceEEEECCCCcEEEEeCCCCeeeeHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHHHHHcCCceEE
Q 047555 198 SYRVVRDENGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLNDKITKAVVTVPAYFNDSQRTATKDAGRIAGLEVLR 277 (593)
Q Consensus 198 ~~~v~~~~~g~~~i~~~~~~~~~~~~~l~~~~L~~l~~~a~~~l~~~~~~~viTVPa~~~~~~r~~l~~Aa~~AGl~~v~ 277 (593)
+..+..+.+|.+++. +..++.+++... |+.+. -..+-..++|-.-..-.....-.+.++++.+|+..+.
T Consensus 21 ~i~i~I~~dg~i~~~----~~~v~~~~L~~~-l~~~~------~~~~~~~V~I~aD~~~~y~~vv~vmd~l~~aG~~~v~ 89 (99)
T 2pfu_A 21 PVYLSVKADNSMFIG----NDPVTDETMITA-LNALT------EGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIG 89 (99)
T ss_dssp CCEEEEETTTEEEET----TEEECSSSHHHH-HHHHS------SSCCSSCEEEEECTTCCHHHHHHHHHHHHHTCCCCEE
T ss_pred CEEEEEeCCCCEEEC----CEecCHHHHHHH-HHHHH------hcCCCceEEEEcCCCCCHHHHHHHHHHHHHcCCCeEE
Confidence 455666677776664 666766555332 22211 1122245788888788888888899999999999999
Q ss_pred EechhH
Q 047555 278 IINEPT 283 (593)
Q Consensus 278 li~Ep~ 283 (593)
|+.++.
T Consensus 90 l~t~~~ 95 (99)
T 2pfu_A 90 LVGEET 95 (99)
T ss_dssp CTTCCC
T ss_pred EEecCc
Confidence 988764
No 145
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=27.95 E-value=37 Score=33.28 Aligned_cols=43 Identities=14% Similarity=0.093 Sum_probs=26.7
Q ss_pred HcCCceEEEechhHHHHHHhcccc-CCCceEEEEeeCCceEEEEEE
Q 047555 270 IAGLEVLRIINEPTAASLAYGFER-KNNETILVFDLGGGTFDVSVL 314 (593)
Q Consensus 270 ~AGl~~v~li~Ep~AAal~~~~~~-~~~~~vlVvD~GggT~Dvsv~ 314 (593)
..|++ +.+.++..|+|++..... ....+++++-+|.| +-..++
T Consensus 106 ~~~~p-v~v~NDanaaa~~e~~~~~~~~~~~~~v~~GtG-iG~gii 149 (310)
T 3htv_A 106 TLNCP-VEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTG-MGFAVW 149 (310)
T ss_dssp HHTSC-EEEEEHHHHHHHHHHHHTTCTTSCEEEEEESSS-EEEEEE
T ss_pred HhCCC-EEEeeHHHHHHHHHHhhcccCCceEEEEEecee-EEEEEE
Confidence 34775 689999999987543322 23456777777765 333443
No 146
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=26.42 E-value=27 Score=33.78 Aligned_cols=59 Identities=10% Similarity=0.030 Sum_probs=33.5
Q ss_pred cCcEEEEeCCCCCHHHHHHHHHHHH-HcCC-ceEEEechhHHHHHHhccccCCCceEEEEeeCCce
Q 047555 245 ITKAVVTVPAYFNDSQRTATKDAGR-IAGL-EVLRIINEPTAASLAYGFERKNNETILVFDLGGGT 308 (593)
Q Consensus 245 ~~~~viTVPa~~~~~~r~~l~~Aa~-~AGl-~~v~li~Ep~AAal~~~~~~~~~~~vlVvD~GggT 308 (593)
+..+.|++|..- ......+++.++ ..++ ..+.+.+...+|+++-. .....+++=+|-|.
T Consensus 58 i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~----g~~~~v~v~~GTGi 118 (291)
T 1zxo_A 58 FNAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC----GQKAGIACILGTGS 118 (291)
T ss_dssp ---CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT----TTSCBEEEEESSSE
T ss_pred ccEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc----CCCCcEEEEeCCCh
Confidence 345778888653 221224444443 3454 46899999999998653 12334444477776
No 147
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=26.41 E-value=39 Score=33.60 Aligned_cols=38 Identities=18% Similarity=0.399 Sum_probs=15.8
Q ss_pred EEEEEcCccceEEEEEE-CCe--eEE--EeCCCCCccceEEEE
Q 047555 114 VVGIDLGTTNSAVAAME-GGK--PTI--VTNAEGQRTTPSVVA 151 (593)
Q Consensus 114 vVGIDfGTt~s~va~~~-~g~--~~i--i~~~~g~~~~PS~V~ 151 (593)
++|+|+|..|++++..+ +|. ... .+.|.|...++..+.
T Consensus 2 iiG~DIGGAn~K~a~~~~~g~~~~~~~~~PlW~~~~~L~~~l~ 44 (334)
T 3cet_A 2 ILGIDIGGANTKITELHENGEFKVHHLYFPMWKNNDKLAEVLK 44 (334)
T ss_dssp EEEEEEC--CEEEEEECSTTCCEEEEC----------------
T ss_pred eeEEEecccceeeeeecCCCceEEEEEecCCcCCchHHHHHHH
Confidence 79999999999999875 444 222 246777666666554
No 148
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=25.64 E-value=1.1e+02 Score=29.29 Aligned_cols=44 Identities=25% Similarity=0.459 Sum_probs=34.3
Q ss_pred CCCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHH
Q 047555 437 NDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQ 483 (593)
Q Consensus 437 ~~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~ 483 (593)
..++.|+| |++.+|++.+.|++.++.++. ..||.+++|.-+..+
T Consensus 177 ~g~D~iVL--GCTh~pll~~~i~~~~~~~v~-vIDs~~~~a~~~~~~ 220 (269)
T 3ist_A 177 TKIDTVIL--GCTHYPLLKPIIENFMGDGVA-VINSGEETASEVSAL 220 (269)
T ss_dssp SCCCEEEE--CSTTGGGGHHHHHHHHCTTSE-EECTHHHHHHHHHHH
T ss_pred CCCCEEEE--CCCCHHHHHHHHHHHcCCCCe-EECcHHHHHHHHHHH
Confidence 35787777 899999999999999976543 568888888766543
No 149
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=25.27 E-value=81 Score=30.62 Aligned_cols=51 Identities=20% Similarity=0.214 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCC
Q 047555 412 ELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKD 465 (593)
Q Consensus 412 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~ 465 (593)
++++...+.+.+.++++|++++++..+|+.|+.-|++.+ +-+.+.+.||.+
T Consensus 211 ~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~---~~d~i~~~lg~~ 261 (317)
T 1hnj_A 211 EVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLR---IISATAKKLGMS 261 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHH---HHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHcCCC
Confidence 455566678889999999999999999999999887654 345788888754
No 150
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=24.36 E-value=81 Score=30.37 Aligned_cols=43 Identities=16% Similarity=0.258 Sum_probs=33.5
Q ss_pred CCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHH
Q 047555 438 DLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQ 483 (593)
Q Consensus 438 ~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~ 483 (593)
.++.|+| |++.+|++.+.+++.++.++. ..||.+++|.-+..+
T Consensus 196 g~D~iIL--GCTh~PlL~~~i~~~~~~~v~-lIDs~~~~A~~~~~~ 238 (274)
T 3uhf_A 196 TPDALIL--ACTHFPLLGRSLSKYFGDKTK-LIHSGDAIVEFLKER 238 (274)
T ss_dssp CCSEEEE--CSTTGGGGHHHHHHHHCTTCE-EEEHHHHHHHHHHHH
T ss_pred CCCEEEE--CCCChHHHHHHHHHHcCCCCE-EEcCHHHHHHHHHHH
Confidence 4777877 899999999999999975543 568888887755543
No 151
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=24.17 E-value=60 Score=31.27 Aligned_cols=21 Identities=14% Similarity=0.260 Sum_probs=18.4
Q ss_pred CeEEEEEcCccceEEEEEE-CC
Q 047555 112 EKVVGIDLGTTNSAVAAME-GG 132 (593)
Q Consensus 112 ~~vVGIDfGTt~s~va~~~-~g 132 (593)
..++.||.|+|++++++++ ++
T Consensus 23 ~M~L~IDiGNT~ik~g~~~~~~ 44 (271)
T 2f9w_A 23 SMILELDCGNSLIKWRVIEGAA 44 (271)
T ss_dssp CEEEEEEECSSCEEEEEEETTT
T ss_pred CcEEEEEeCCCeeEEEEEeCCC
Confidence 3689999999999999998 54
No 152
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=24.06 E-value=3.6e+02 Score=27.56 Aligned_cols=97 Identities=19% Similarity=0.190 Sum_probs=62.6
Q ss_pred cEEEEeCCCCeeeeHHHHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHHHHHcCCceEEEechhHH-HH
Q 047555 208 NVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLNDKITKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTA-AS 286 (593)
Q Consensus 208 ~~~i~~~~~~~~~~~~~l~~~~L~~l~~~a~~~l~~~~~~~viTVPa~~~~~~r~~l~~Aa~~AGl~~v~li~Ep~A-Aa 286 (593)
.+.+.+|.....+...-++..+-.++ -+ +.+++++.|.. ---.+.-|++.+|++.++-+--..| ||
T Consensus 126 rvGlYVPGG~a~ypSsvLM~aiPAkV-------AG--V~~Iv~~tPp~----i~p~iL~AA~l~Gv~eIy~vGGAQAIAA 192 (434)
T 1kae_A 126 SVGLYIPGGSAPLFSTVLMLATPASI-------AG--CKKVVLCSPPP----IADEILYAAQLCGVQDVFNVGGAQAIAA 192 (434)
T ss_dssp EEEEECCCSSSCCTHHHHHHHHHHHH-------HT--CSEEEEEECSS----CCHHHHHHHHHTTCCEEEECCHHHHHHH
T ss_pred eEEEEecCCCCCchhHHHHhhccHhh-------cC--CCeEEEECCCC----CCHHHHHHHHHcCCCEEeecccHHHHHH
Confidence 34456665444455444444443333 23 46899999982 2346788999999999999998888 67
Q ss_pred HHhccccCC--------C--------------ceEEEEeeCCceEEEEEEEEc
Q 047555 287 LAYGFERKN--------N--------------ETILVFDLGGGTFDVSVLEVG 317 (593)
Q Consensus 287 l~~~~~~~~--------~--------------~~vlVvD~GggT~Dvsv~~~~ 317 (593)
++|+.+.-+ + ...+=+|+=+|-+++.++-.+
T Consensus 193 lAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G~VgIDm~AGPSEilViAD~ 245 (434)
T 1kae_A 193 LAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPSEVLVIADS 245 (434)
T ss_dssp HHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTTSCEESCCCCCCEEEEEECT
T ss_pred HHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcCccccCCCCCCceEEEEeCC
Confidence 899875211 0 112347888888888777643
No 153
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=23.89 E-value=81 Score=31.61 Aligned_cols=21 Identities=14% Similarity=0.102 Sum_probs=18.5
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 047555 111 NEKVVGIDLGTTNSAVAAMEG 131 (593)
Q Consensus 111 ~~~vVGIDfGTt~s~va~~~~ 131 (593)
++.++|||+|.|++.+++++.
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEec
Confidence 568999999999999998753
No 154
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=22.03 E-value=1.2e+02 Score=28.43 Aligned_cols=38 Identities=8% Similarity=0.123 Sum_probs=27.6
Q ss_pred CCCeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHH
Q 047555 438 DLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGA 480 (593)
Q Consensus 438 ~i~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GA 480 (593)
.++.|+| |++.+|++.+.|++.+|.+ ..||-.++++=+
T Consensus 174 gad~IVL--GCTh~p~l~~~i~~~~gVp---vID~~~a~~~~~ 211 (245)
T 3qvl_A 174 GSGAIVL--GSGGMATLAQQLTRELRVP---VIDGVSAAVKMV 211 (245)
T ss_dssp CCSEEEE--CCGGGGGGHHHHHHHHTSC---EECHHHHHHHHH
T ss_pred CCCEEEE--CCCChHHHHHHHHHHcCCe---EEccHHHHHHHH
Confidence 3666776 6778999999999999833 457766665433
No 155
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=21.90 E-value=2.6e+02 Score=28.81 Aligned_cols=30 Identities=33% Similarity=0.617 Sum_probs=24.2
Q ss_pred CCceEEEEeeCCceEEEEEEEEcCCEEEEEE
Q 047555 295 NNETILVFDLGGGTFDVSVLEVGDGVFEVLS 325 (593)
Q Consensus 295 ~~~~vlVvD~GggT~Dvsv~~~~~~~~~vl~ 325 (593)
+...+|.+|+||.++-+.++++.++ +++..
T Consensus 57 E~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~ 86 (445)
T 3hm8_A 57 ERGDFLALDLGGTNFRVLLVRVTTG-VQITS 86 (445)
T ss_dssp CCEEEEEEEESSSSEEEEEEEESSS-EEEEE
T ss_pred eeeEEEEEEecCCeEEEEEEEECCc-eEEEE
Confidence 3567999999999999999999766 44433
No 156
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=21.18 E-value=70 Score=31.19 Aligned_cols=44 Identities=20% Similarity=0.256 Sum_probs=30.9
Q ss_pred CeEEEEeCCCChHhHHHHHHhHhCCCCCCCCCChhHHHhHHHHHhh
Q 047555 440 DEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQGG 485 (593)
Q Consensus 440 ~~VvLvGG~s~~p~l~~~l~~~~g~~v~~~~~p~~aVA~GAal~a~ 485 (593)
..|.|+|........+..|+. +|.++. ..+++.++..|....+.
T Consensus 248 ~~v~LiG~~~L~~~Y~~AL~~-~G~~~~-~~d~~~~~~~GL~~~~~ 291 (295)
T 3nuw_A 248 QAISLVAGSSLTSRYQQAFAA-IGREVS-AVAGDTAFQTGIRSIAY 291 (295)
T ss_dssp SCEEEEECHHHHHHHHHHHHH-TTCCEE-EEEHHHHHHHHHHHHHH
T ss_pred CeEEEEeCHHHHHHHHHHHHH-cCCCce-ecCHHHHHHHHHHHHHH
Confidence 469999988877777777764 666443 44788888888765443
No 157
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=20.91 E-value=1.1e+02 Score=29.81 Aligned_cols=51 Identities=14% Similarity=0.160 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCC
Q 047555 412 ELCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKD 465 (593)
Q Consensus 412 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~ 465 (593)
++++-..+.+.+.++++|++++++..+|+.|+.-+.+.+ +-+.+.+.||.+
T Consensus 213 ~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~---~~d~~~~~lg~~ 263 (322)
T 1ub7_A 213 EVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLR---IIDAARERLGLP 263 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHH---HHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHcCCC
Confidence 344555677888999999999999999999999887654 345677778753
No 158
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=20.28 E-value=97 Score=31.73 Aligned_cols=26 Identities=27% Similarity=0.436 Sum_probs=23.5
Q ss_pred CCCCeEEEEeCCC-ChHhHHHHHHhHh
Q 047555 437 NDLDEVILVGGST-RIPAVQELVKKMT 462 (593)
Q Consensus 437 ~~i~~VvLvGG~s-~~p~l~~~l~~~~ 462 (593)
..+|.|+++||-+ +.+.+++.+.+.+
T Consensus 329 ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 329 HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred CCCCEEEECccccccCHHHHHHHHhhH
Confidence 4599999999999 9999999998866
No 159
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=20.20 E-value=1.4e+02 Score=29.28 Aligned_cols=50 Identities=16% Similarity=0.155 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCC
Q 047555 413 LCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKD 465 (593)
Q Consensus 413 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~ 465 (593)
+++-..+.+.+.++++|++++++..+|+.|+.-+++.+ +-+.+.+.+|.+
T Consensus 225 v~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~---~~d~i~~~lg~~ 274 (339)
T 1mzj_A 225 VFRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLR---IIDVLVDRLGVP 274 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHH---HHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH---HHHHHHHHhCCC
Confidence 44445677888999999999999999999998887653 345677778754
No 160
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=20.04 E-value=1.5e+02 Score=28.90 Aligned_cols=50 Identities=14% Similarity=0.195 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCCChHhHHHHHHhHhCCC
Q 047555 413 LCSDLLDRLKKPVETALRDAKLSFNDLDEVILVGGSTRIPAVQELVKKMTGKD 465 (593)
Q Consensus 413 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~g~~ 465 (593)
+++-..+.+.+.++++|++++++..+|+.|+.-+++.+ +-+.+.+.++.+
T Consensus 218 v~~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~---~~d~~~~~lg~~ 267 (331)
T 2x3e_A 218 VFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTR---ILAAVADQLDLP 267 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHH---HHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHcCCC
Confidence 44455677888899999999999999999999887754 345577777753
Done!