Query 047558
Match_columns 120
No_of_seqs 130 out of 1207
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 12:12:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047558.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047558hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 99.8 5.2E-19 1.1E-23 123.0 13.1 91 29-120 24-188 (489)
2 PLN03234 cytochrome P450 83B1; 99.7 1E-15 2.3E-20 107.2 13.1 93 27-119 24-189 (499)
3 PTZ00404 cytochrome P450; Prov 99.7 1.2E-15 2.5E-20 106.5 12.8 94 26-119 24-186 (482)
4 PLN03112 cytochrome P450 famil 99.7 2.3E-15 5E-20 105.8 12.5 93 27-119 28-192 (514)
5 PLN02687 flavonoid 3'-monooxyg 99.7 3E-15 6.4E-20 105.4 12.1 89 30-119 33-193 (517)
6 PLN02971 tryptophan N-hydroxyl 99.6 6.8E-15 1.5E-19 104.1 13.2 91 29-119 55-220 (543)
7 KOG0158 Cytochrome P450 CYP3/C 99.6 4.7E-15 1E-19 103.0 12.0 95 25-119 25-192 (499)
8 PLN02290 cytokinin trans-hydro 99.6 8.6E-15 1.9E-19 103.0 12.0 95 25-119 36-219 (516)
9 PLN00110 flavonoid 3',5'-hydro 99.6 2.7E-14 5.8E-19 100.3 14.2 95 25-119 25-191 (504)
10 PLN02183 ferulate 5-hydroxylas 99.6 1.8E-14 4E-19 101.4 12.4 93 25-119 30-193 (516)
11 PLN02966 cytochrome P450 83A1 99.6 1.4E-14 3E-19 101.7 10.8 90 30-119 28-190 (502)
12 PLN02394 trans-cinnamate 4-mon 99.6 8.5E-14 1.8E-18 97.7 12.9 95 26-120 25-193 (503)
13 PLN02500 cytochrome P450 90B1 99.5 1.1E-13 2.5E-18 96.8 9.8 92 28-119 35-196 (490)
14 PLN00168 Cytochrome P450; Prov 99.5 1E-12 2.2E-17 92.7 13.1 91 30-120 34-199 (519)
15 PLN02655 ent-kaurene oxidase 99.5 4.2E-13 9.1E-18 93.5 9.7 87 33-119 1-162 (466)
16 PLN02774 brassinosteroid-6-oxi 99.5 5.7E-13 1.2E-17 92.8 9.7 92 28-119 28-184 (463)
17 PLN02196 abscisic acid 8'-hydr 99.5 1.4E-12 3.1E-17 90.8 11.1 91 28-119 32-187 (463)
18 PLN02169 fatty acid (omega-1)- 99.4 7.6E-12 1.7E-16 88.0 13.1 93 27-119 27-195 (500)
19 PLN03018 homomethionine N-hydr 99.4 1E-11 2.2E-16 88.0 12.5 89 31-119 40-203 (534)
20 PF00067 p450: Cytochrome P450 99.4 5.7E-13 1.2E-17 91.3 6.0 87 33-119 1-161 (463)
21 PLN02302 ent-kaurenoic acid ox 99.4 1.9E-11 4.1E-16 85.6 13.3 87 29-119 40-201 (490)
22 KOG0157 Cytochrome P450 CYP4/C 99.4 1.2E-11 2.6E-16 87.0 12.0 88 29-117 33-192 (497)
23 PLN02987 Cytochrome P450, fami 99.4 8.7E-12 1.9E-16 87.2 10.9 91 27-119 26-186 (472)
24 PLN03141 3-epi-6-deoxocathaste 99.4 5.3E-12 1.1E-16 87.8 9.4 92 28-119 4-165 (452)
25 PLN03195 fatty acid omega-hydr 99.3 3.1E-11 6.7E-16 85.2 11.4 90 30-120 29-191 (516)
26 PLN02936 epsilon-ring hydroxyl 99.2 1.3E-10 2.8E-15 81.7 8.6 88 33-120 14-175 (489)
27 PLN02738 carotene beta-ring hy 99.2 3.2E-10 7E-15 81.8 9.6 71 50-120 151-289 (633)
28 PLN02648 allene oxide synthase 99.1 5.9E-10 1.3E-14 78.2 7.8 89 31-119 17-191 (480)
29 KOG0159 Cytochrome P450 CYP11/ 98.9 5.2E-09 1.1E-13 72.9 7.4 89 32-120 51-221 (519)
30 PLN02426 cytochrome P450, fami 98.5 6.2E-06 1.3E-10 58.5 12.7 39 82-120 162-202 (502)
31 KOG0684 Cytochrome P450 [Secon 98.4 5.2E-06 1.1E-10 57.5 10.2 41 31-71 31-72 (486)
32 COG2124 CypX Cytochrome P450 [ 90.1 1.1 2.5E-05 31.4 5.4 24 95-119 137-160 (411)
33 PF02009 Rifin_STEVOR: Rifin/s 64.6 15 0.00033 25.0 3.9 6 23-28 278-283 (299)
34 PF02009 Rifin_STEVOR: Rifin/s 61.0 16 0.00034 24.9 3.5 18 11-28 269-286 (299)
35 PF15330 SIT: SHP2-interacting 57.7 34 0.00074 19.5 5.2 11 38-48 45-55 (107)
36 PHA02513 V1 structural protein 49.0 51 0.0011 19.0 4.9 46 72-117 38-85 (135)
37 TIGR01477 RIFIN variant surfac 45.0 48 0.001 23.3 3.8 9 21-29 330-338 (353)
38 PTZ00046 rifin; Provisional 44.0 50 0.0011 23.2 3.8 9 21-29 335-343 (358)
39 PRK09702 PTS system arbutin-sp 42.7 81 0.0017 19.5 4.3 24 2-25 8-31 (161)
40 PRK04778 septation ring format 41.9 1.5E+02 0.0032 22.3 6.8 23 49-71 59-81 (569)
41 TIGR01477 RIFIN variant surfac 41.5 47 0.001 23.3 3.4 19 12-30 324-342 (353)
42 PTZ00046 rifin; Provisional 41.4 46 0.00099 23.4 3.4 19 12-30 329-347 (358)
43 PF01707 Peptidase_C9: Peptida 41.2 26 0.00056 22.3 2.0 19 102-120 84-102 (202)
44 PF05613 Herpes_U15: Human her 39.2 20 0.00044 19.6 1.2 14 72-85 4-17 (110)
45 PF07960 CBP4: CBP4; InterPro 36.0 73 0.0016 18.9 3.2 23 73-95 52-74 (128)
46 PRK03427 cell division protein 34.5 74 0.0016 22.2 3.5 19 5-23 8-26 (333)
47 COG3115 ZipA Cell division pro 34.2 63 0.0014 22.2 3.0 20 5-24 7-26 (324)
48 PLN02196 abscisic acid 8'-hydr 32.5 1.4E+02 0.0029 21.5 4.8 15 26-40 27-41 (463)
49 KOG0114 Predicted RNA-binding 29.1 1.2E+02 0.0026 17.5 4.9 20 52-71 31-50 (124)
50 TIGR02205 septum_zipA cell div 27.8 39 0.00085 22.9 1.4 16 5-20 5-20 (284)
51 PF06679 DUF1180: Protein of u 27.6 1.3E+02 0.0029 18.6 3.5 10 15-24 108-117 (163)
52 COG4459 NapE Periplasmic nitra 27.6 93 0.002 15.6 3.4 12 27-38 50-61 (62)
53 COG1847 Jag Predicted RNA-bind 26.8 93 0.002 20.1 2.8 50 62-111 127-184 (208)
54 PF11978 MVP_shoulder: Shoulde 25.3 82 0.0018 18.4 2.2 22 98-119 67-88 (118)
55 PHA02780 hypothetical protein; 25.2 1.1E+02 0.0023 15.6 3.8 35 77-114 34-68 (73)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.82 E-value=5.2e-19 Score=123.00 Aligned_cols=91 Identities=26% Similarity=0.622 Sum_probs=80.0
Q ss_pred cCCCCCCCCCCcccccccccCCC-hhHHHHHHHHhhCCceeeec------------------------------------
Q 047558 29 RKQVRPGPKPYPVIGNLLEPGGK-PHKSLANLTKIHGRIMSLKT------------------------------------ 71 (120)
Q Consensus 29 ~~~~~p~p~~~p~~g~~~~~~~~-~~~~~~~~~~~yg~~~~~~~------------------------------------ 71 (120)
+.+.||||+++|++||++++... +|..+.++.++|||++++++
T Consensus 24 ~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~ 103 (489)
T KOG0156|consen 24 RRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLK 103 (489)
T ss_pred CCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHH
Confidence 37889999999999999999865 89999999999999999998
Q ss_pred -----------------cHHHH--------------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHHH
Q 047558 72 -----------------WPDLR--------------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSNT 114 (120)
Q Consensus 72 -----------------W~~~R--------------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~~ 114 (120)
||.+| .+|++.+++.+.+ ..+++++|+.+.+..++.|||+++
T Consensus 104 ~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~~~ 182 (489)
T KOG0156|consen 104 YLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVICRM 182 (489)
T ss_pred HhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHHHH
Confidence 88777 5778888888876 233379999999999999999999
Q ss_pred HhcCCC
Q 047558 115 IFSSNL 120 (120)
Q Consensus 115 ~fg~~~ 120 (120)
+||.++
T Consensus 183 ~fG~rf 188 (489)
T KOG0156|consen 183 LFGRRF 188 (489)
T ss_pred HhCCcc
Confidence 999875
No 2
>PLN03234 cytochrome P450 83B1; Provisional
Probab=99.69 E-value=1e-15 Score=107.18 Aligned_cols=93 Identities=19% Similarity=0.422 Sum_probs=76.9
Q ss_pred hhcCCCCCCCCCCcccccccccC-CChhHHHHHHHHhhCCceeeec----------------------------------
Q 047558 27 RRRKQVRPGPKPYPVIGNLLEPG-GKPHKSLANLTKIHGRIMSLKT---------------------------------- 71 (120)
Q Consensus 27 ~~~~~~~p~p~~~p~~g~~~~~~-~~~~~~~~~~~~~yg~~~~~~~---------------------------------- 71 (120)
+++.+.||||+++|++||...+. .+++.++.++.++||+++++++
T Consensus 24 ~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~ 103 (499)
T PLN03234 24 KKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQ 103 (499)
T ss_pred CCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhh
Confidence 34457799999999999998875 4678889999999999998877
Q ss_pred ------------------cHHHH--------------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHH
Q 047558 72 ------------------WPDLR--------------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSN 113 (120)
Q Consensus 72 ------------------W~~~R--------------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~ 113 (120)
|+.+| +++++++++.+.+.+++++++|+.+.+..+|+|++++
T Consensus 104 ~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~ 183 (499)
T PLN03234 104 QTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCR 183 (499)
T ss_pred hhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHH
Confidence 66665 4567777777765555677899999999999999999
Q ss_pred HHhcCC
Q 047558 114 TIFSSN 119 (120)
Q Consensus 114 ~~fg~~ 119 (120)
++||.+
T Consensus 184 ~~fG~~ 189 (499)
T PLN03234 184 QAFGKR 189 (499)
T ss_pred HHhCCc
Confidence 999976
No 3
>PTZ00404 cytochrome P450; Provisional
Probab=99.69 E-value=1.2e-15 Score=106.54 Aligned_cols=94 Identities=23% Similarity=0.431 Sum_probs=79.0
Q ss_pred HhhcCCCCCCCCCCcccccccccCCChhHHHHHHHHhhCCceeeec----------------------------------
Q 047558 26 RRRRKQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLKT---------------------------------- 71 (120)
Q Consensus 26 ~~~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~yg~~~~~~~---------------------------------- 71 (120)
.+.+.+.+|||+++|++|++..+.++++..+.++.++||+++++++
T Consensus 24 ~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~ 103 (482)
T PTZ00404 24 KKIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSI 103 (482)
T ss_pred hhccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCccee
Confidence 3455677899999999999988766788999999999999998886
Q ss_pred ----------------cHHHH-------------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHHHHh
Q 047558 72 ----------------WPDLR-------------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSNTIF 116 (120)
Q Consensus 72 ----------------W~~~R-------------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~~~f 116 (120)
|+++| .++++++++.+.+..+.++++|+.+.+.++++|+|++++|
T Consensus 104 ~~~~~~~~l~~~~g~~w~~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~f 183 (482)
T PTZ00404 104 KHGTFYHGIVTSSGEYWKRNREIVGKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKYIF 183 (482)
T ss_pred eeeccCCceeccChHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHh
Confidence 77777 5677778887765444567799999999999999999999
Q ss_pred cCC
Q 047558 117 SSN 119 (120)
Q Consensus 117 g~~ 119 (120)
|.+
T Consensus 184 G~~ 186 (482)
T PTZ00404 184 NED 186 (482)
T ss_pred ccc
Confidence 975
No 4
>PLN03112 cytochrome P450 family protein; Provisional
Probab=99.67 E-value=2.3e-15 Score=105.81 Aligned_cols=93 Identities=29% Similarity=0.568 Sum_probs=75.4
Q ss_pred hhcCCCCCCCCCCcccccccccCCChhHHHHHHHHhhCCceeeec-----------------------------------
Q 047558 27 RRRKQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLKT----------------------------------- 71 (120)
Q Consensus 27 ~~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~yg~~~~~~~----------------------------------- 71 (120)
++..+.||||+++|++||+..+..+++..+.+++++||+++++++
T Consensus 28 ~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~ 107 (514)
T PLN03112 28 RKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAV 107 (514)
T ss_pred cCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcccce
Confidence 334567899999999999987766788899999999999998776
Q ss_pred -----------------cHHHH--------------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHHH
Q 047558 72 -----------------WPDLR--------------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSNT 114 (120)
Q Consensus 72 -----------------W~~~R--------------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~~ 114 (120)
|+.+| .++++.+++.+.+...+++++|+.+.++++++|+++++
T Consensus 108 ~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~ 187 (514)
T PLN03112 108 HLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVTRM 187 (514)
T ss_pred eeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHHHH
Confidence 77776 34566666665544445678999999999999999999
Q ss_pred HhcCC
Q 047558 115 IFSSN 119 (120)
Q Consensus 115 ~fg~~ 119 (120)
+||.+
T Consensus 188 ~fG~~ 192 (514)
T PLN03112 188 LLGKQ 192 (514)
T ss_pred HcCCc
Confidence 99975
No 5
>PLN02687 flavonoid 3'-monooxygenase
Probab=99.66 E-value=3e-15 Score=105.39 Aligned_cols=89 Identities=27% Similarity=0.551 Sum_probs=74.0
Q ss_pred CCCCCCCCCCcccccccccCCChhHHHHHHHHhhCCceeeec--------------------------------------
Q 047558 30 KQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLKT-------------------------------------- 71 (120)
Q Consensus 30 ~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~yg~~~~~~~-------------------------------------- 71 (120)
.+.||||+++|++|+...+..+++..+.++.++||+++++++
T Consensus 33 ~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~~ 112 (517)
T PLN02687 33 RPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMA 112 (517)
T ss_pred CCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhhc
Confidence 456889999999999988776788999999999999998876
Q ss_pred --------------cHHHH--------------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHHHHhc
Q 047558 72 --------------WPDLR--------------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSNTIFS 117 (120)
Q Consensus 72 --------------W~~~R--------------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~~~fg 117 (120)
|+.+| +++++++++.+.+. .+++++|+.+.+..+|+|+|+.++||
T Consensus 113 ~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~vd~~~~~~~~t~dvi~~~~fG 191 (517)
T PLN02687 113 YNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQ-HGTAPVNLGQLVNVCTTNALGRAMVG 191 (517)
T ss_pred cCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHh-cCCCceeHHHHHHHHHHHHHHHHHhC
Confidence 77777 45566777777543 34568999999999999999999999
Q ss_pred CC
Q 047558 118 SN 119 (120)
Q Consensus 118 ~~ 119 (120)
.+
T Consensus 192 ~~ 193 (517)
T PLN02687 192 RR 193 (517)
T ss_pred cc
Confidence 75
No 6
>PLN02971 tryptophan N-hydroxylase
Probab=99.65 E-value=6.8e-15 Score=104.15 Aligned_cols=91 Identities=16% Similarity=0.281 Sum_probs=71.6
Q ss_pred cCCCCCCCCCCcccccccccC-CC-hhHHHHHHHHhhC-Cceeeec----------------------------------
Q 047558 29 RKQVRPGPKPYPVIGNLLEPG-GK-PHKSLANLTKIHG-RIMSLKT---------------------------------- 71 (120)
Q Consensus 29 ~~~~~p~p~~~p~~g~~~~~~-~~-~~~~~~~~~~~yg-~~~~~~~---------------------------------- 71 (120)
+.+.||||+++|++||++.+. +. .+..+.++.++|| +++++++
T Consensus 55 ~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~ 134 (543)
T PLN02971 55 LHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQ 134 (543)
T ss_pred CCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccch
Confidence 346789999999999998764 33 3677889999999 7888876
Q ss_pred ------------------cHHHH--------------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHH
Q 047558 72 ------------------WPDLR--------------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSN 113 (120)
Q Consensus 72 ------------------W~~~R--------------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~ 113 (120)
|+.+| +++++.+.+.+.+...+++++|+.+.+.++|+|+|++
T Consensus 135 ~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~ 214 (543)
T PLN02971 135 KILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKR 214 (543)
T ss_pred hhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHH
Confidence 88887 3444555555544445567899999999999999999
Q ss_pred HHhcCC
Q 047558 114 TIFSSN 119 (120)
Q Consensus 114 ~~fg~~ 119 (120)
++||.+
T Consensus 215 ~~fG~~ 220 (543)
T PLN02971 215 LMFGTR 220 (543)
T ss_pred HHhCCc
Confidence 999975
No 7
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.65 E-value=4.7e-15 Score=103.04 Aligned_cols=95 Identities=19% Similarity=0.343 Sum_probs=75.7
Q ss_pred HHhhcCCCCCCCCCCcccccccccC--CChhHHHHHHHHhhCCceeeec-------------------------------
Q 047558 25 SRRRRKQVRPGPKPYPVIGNLLEPG--GKPHKSLANLTKIHGRIMSLKT------------------------------- 71 (120)
Q Consensus 25 ~~~~~~~~~p~p~~~p~~g~~~~~~--~~~~~~~~~~~~~yg~~~~~~~------------------------------- 71 (120)
..+++.+++|+|+++|++||+..+. +.+.....+...++|++++++.
T Consensus 25 ~~yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~ 104 (499)
T KOG0158|consen 25 YSYWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRP 104 (499)
T ss_pred hhhhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCC
Confidence 3456677999999999999998873 3335555555555589998888
Q ss_pred ---------------------cHHHH-------------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHH
Q 047558 72 ---------------------WPDLR-------------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLS 111 (120)
Q Consensus 72 ---------------------W~~~R-------------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi 111 (120)
||+.| ++.++++++.+.+....+..+++.+.+.++|.|||
T Consensus 105 ~~~d~~~~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI 184 (499)
T KOG0158|consen 105 IYGDPEDPLSALNLFFLRGERWKRLRTKLSPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVI 184 (499)
T ss_pred CcCCCCCcccccCchhccCchHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHH
Confidence 99999 67888899988775554467899999999999999
Q ss_pred HHHHhcCC
Q 047558 112 SNTIFSSN 119 (120)
Q Consensus 112 ~~~~fg~~ 119 (120)
++|+||.+
T Consensus 185 ~~~AfG~~ 192 (499)
T KOG0158|consen 185 GSCAFGLD 192 (499)
T ss_pred hHhhcccc
Confidence 99999976
No 8
>PLN02290 cytokinin trans-hydroxylase
Probab=99.63 E-value=8.6e-15 Score=102.99 Aligned_cols=95 Identities=22% Similarity=0.370 Sum_probs=74.4
Q ss_pred HHhhcCCCCCCCCCCcccccccccCC-------------------ChhHHHHHHHHhhCCceeeec--------------
Q 047558 25 SRRRRKQVRPGPKPYPVIGNLLEPGG-------------------KPHKSLANLTKIHGRIMSLKT-------------- 71 (120)
Q Consensus 25 ~~~~~~~~~p~p~~~p~~g~~~~~~~-------------------~~~~~~~~~~~~yg~~~~~~~-------------- 71 (120)
+++++.+.||||+++|++||++.+.. .....+.++.++||+++++++
T Consensus 36 ~~~~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v 115 (516)
T PLN02290 36 KKIMERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELI 115 (516)
T ss_pred HHHHHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHH
Confidence 44556778999999999999876531 122356789999999988876
Q ss_pred ------------------------------------cHHHH-------------------HHHHHHHHHHHHHhCCCC-C
Q 047558 72 ------------------------------------WPDLR-------------------RKKINDLLASVEENCPAG-K 95 (120)
Q Consensus 72 ------------------------------------W~~~R-------------------~~~~~~~~~~l~~~~~~~-~ 95 (120)
|+++| +++++++++.+.+..+.+ +
T Consensus 116 ~~il~~~~~~~~r~~~~~~~~~~~~g~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~ 195 (516)
T PLN02290 116 KELLTKYNTVTGKSWLQQQGTKHFIGRGLLMANGADWYHQRHIAAPAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQT 195 (516)
T ss_pred HHHHhcCCCCCCCcchhhhHHHHHhcCCccccCchHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 77777 566778888886544333 5
Q ss_pred ceeHHHHHHHHHHHHHHHHHhcCC
Q 047558 96 AIGFGQAAFHTSLNLSSNTIFSSN 119 (120)
Q Consensus 96 ~~d~~~~~~~~t~dvi~~~~fg~~ 119 (120)
++|+.+.+..+++|+|++++||.+
T Consensus 196 ~vd~~~~~~~~~~~vi~~~~fG~~ 219 (516)
T PLN02290 196 EVEIGEYMTRLTADIISRTEFDSS 219 (516)
T ss_pred eEEhHHHHHHHHHHHHHHHHcCCc
Confidence 899999999999999999999976
No 9
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=99.63 E-value=2.7e-14 Score=100.35 Aligned_cols=95 Identities=26% Similarity=0.474 Sum_probs=77.6
Q ss_pred HHhhcCCCCCCCCCCcccccccccCCChhHHHHHHHHhhCCceeeec---------------------------------
Q 047558 25 SRRRRKQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLKT--------------------------------- 71 (120)
Q Consensus 25 ~~~~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~yg~~~~~~~--------------------------------- 71 (120)
......+.||||+++|++|+++.+...++..+.++.++||+++++++
T Consensus 25 ~~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~ 104 (504)
T PLN00110 25 LPKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAG 104 (504)
T ss_pred hhcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccc
Confidence 33445677999999999999877766678899999999999999876
Q ss_pred -------------------cHHHH--------------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHH
Q 047558 72 -------------------WPDLR--------------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSS 112 (120)
Q Consensus 72 -------------------W~~~R--------------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~ 112 (120)
|+.+| .++++.+++.+.+...+|+++|+.+.+..+++|+|+
T Consensus 105 ~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~ 184 (504)
T PLN00110 105 ATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIG 184 (504)
T ss_pred hhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHH
Confidence 77777 355566677766555567789999999999999999
Q ss_pred HHHhcCC
Q 047558 113 NTIFSSN 119 (120)
Q Consensus 113 ~~~fg~~ 119 (120)
+++||.+
T Consensus 185 ~~~fg~~ 191 (504)
T PLN00110 185 QVILSRR 191 (504)
T ss_pred HHHhCCc
Confidence 9999975
No 10
>PLN02183 ferulate 5-hydroxylase
Probab=99.61 E-value=1.8e-14 Score=101.40 Aligned_cols=93 Identities=33% Similarity=0.637 Sum_probs=73.6
Q ss_pred HHhhcCCCCCCCCCCcccccccccCCChhHHHHHHHHhhCCceeeec---------------------------------
Q 047558 25 SRRRRKQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLKT--------------------------------- 71 (120)
Q Consensus 25 ~~~~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~yg~~~~~~~--------------------------------- 71 (120)
+..++.+.||||+++|++|+...+....+..+.++.++||+++++++
T Consensus 30 ~~~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~ 109 (516)
T PLN02183 30 RLRRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIA 109 (516)
T ss_pred hccCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccc
Confidence 33445677999999999999877755567788999999999998887
Q ss_pred -------------------cHHHH-------------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHH
Q 047558 72 -------------------WPDLR-------------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSN 113 (120)
Q Consensus 72 -------------------W~~~R-------------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~ 113 (120)
|+.+| .++++.+++.+.+ ..|+++|+.+.+.++++|++++
T Consensus 110 ~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~~vi~~ 187 (516)
T PLN02183 110 ISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVRDEVDSMVRSVSS--NIGKPVNIGELIFTLTRNITYR 187 (516)
T ss_pred hhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHh--cCCCcEeHHHHHHHHHHHHHHh
Confidence 77776 2445555665532 3467899999999999999999
Q ss_pred HHhcCC
Q 047558 114 TIFSSN 119 (120)
Q Consensus 114 ~~fg~~ 119 (120)
++||.+
T Consensus 188 ~~fG~~ 193 (516)
T PLN02183 188 AAFGSS 193 (516)
T ss_pred HhhcCc
Confidence 999975
No 11
>PLN02966 cytochrome P450 83A1
Probab=99.60 E-value=1.4e-14 Score=101.71 Aligned_cols=90 Identities=21% Similarity=0.467 Sum_probs=74.8
Q ss_pred CCCCCCCCCCcccccccccC-CChhHHHHHHHHhhCCceeeec-------------------------------------
Q 047558 30 KQVRPGPKPYPVIGNLLEPG-GKPHKSLANLTKIHGRIMSLKT------------------------------------- 71 (120)
Q Consensus 30 ~~~~p~p~~~p~~g~~~~~~-~~~~~~~~~~~~~yg~~~~~~~------------------------------------- 71 (120)
.+.||||+++|++|++..+. .+++..+.+++++||+++++++
T Consensus 28 ~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~~ 107 (502)
T PLN02966 28 YKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFI 107 (502)
T ss_pred CCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccceee
Confidence 45789999999999998774 5688899999999999997766
Q ss_pred ---------------cHHHH--------------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHHHHh
Q 047558 72 ---------------WPDLR--------------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSNTIF 116 (120)
Q Consensus 72 ---------------W~~~R--------------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~~~f 116 (120)
|+.+| +++++++++.+.+.++.++++|+.+.+..+|+|+|++++|
T Consensus 108 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~~~f 187 (502)
T PLN02966 108 SYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAF 187 (502)
T ss_pred ccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHHHHh
Confidence 55555 4667777777765555567899999999999999999999
Q ss_pred cCC
Q 047558 117 SSN 119 (120)
Q Consensus 117 g~~ 119 (120)
|.+
T Consensus 188 G~~ 190 (502)
T PLN02966 188 GKK 190 (502)
T ss_pred CCc
Confidence 986
No 12
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=99.58 E-value=8.5e-14 Score=97.70 Aligned_cols=95 Identities=23% Similarity=0.471 Sum_probs=75.6
Q ss_pred HhhcCCCCCCCCCCcccccccccCC-ChhHHHHHHHHhhCCceeeec---------------------------------
Q 047558 26 RRRRKQVRPGPKPYPVIGNLLEPGG-KPHKSLANLTKIHGRIMSLKT--------------------------------- 71 (120)
Q Consensus 26 ~~~~~~~~p~p~~~p~~g~~~~~~~-~~~~~~~~~~~~yg~~~~~~~--------------------------------- 71 (120)
.+++.+.||||++.|++|++..+.+ ..+..+.+++++||+++++++
T Consensus 25 ~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~ 104 (503)
T PLN02394 25 RGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVV 104 (503)
T ss_pred hcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcch
Confidence 4455678999999999999887753 357889999999999988876
Q ss_pred -------------------cHHHH--------------------HHHHHHHHHHHHHhCC-CCCceeHHHHHHHHHHHHH
Q 047558 72 -------------------WPDLR--------------------RKKINDLLASVEENCP-AGKAIGFGQAAFHTSLNLS 111 (120)
Q Consensus 72 -------------------W~~~R--------------------~~~~~~~~~~l~~~~~-~~~~~d~~~~~~~~t~dvi 111 (120)
|+.+| +++++++++.+.+..+ .++.+|+.+.++++++|++
T Consensus 105 ~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi 184 (503)
T PLN02394 105 FDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIM 184 (503)
T ss_pred HhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHH
Confidence 77666 4567777777765332 2456999999999999999
Q ss_pred HHHHhcCCC
Q 047558 112 SNTIFSSNL 120 (120)
Q Consensus 112 ~~~~fg~~~ 120 (120)
++++||.++
T Consensus 185 ~~~~fG~~~ 193 (503)
T PLN02394 185 YRMMFDRRF 193 (503)
T ss_pred HHHHhCCCc
Confidence 999999763
No 13
>PLN02500 cytochrome P450 90B1
Probab=99.52 E-value=1.1e-13 Score=96.84 Aligned_cols=92 Identities=17% Similarity=0.237 Sum_probs=67.0
Q ss_pred hcCCCCCCCCCCccccccccc-C----CChhHHHHHHHHhhCCceeeec-------------------------------
Q 047558 28 RRKQVRPGPKPYPVIGNLLEP-G----GKPHKSLANLTKIHGRIMSLKT------------------------------- 71 (120)
Q Consensus 28 ~~~~~~p~p~~~p~~g~~~~~-~----~~~~~~~~~~~~~yg~~~~~~~------------------------------- 71 (120)
.+.+.||||+++|++||...+ . +.++..+.++.++||+++++++
T Consensus 35 ~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~ 114 (490)
T PLN02500 35 KRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPR 114 (490)
T ss_pred CCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCch
Confidence 334678999999999997543 1 3567788999999999988776
Q ss_pred ------------------cHHHH----------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHHHHhc
Q 047558 72 ------------------WPDLR----------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSNTIFS 117 (120)
Q Consensus 72 ------------------W~~~R----------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~~~fg 117 (120)
||.+| .+++++.+..+.+....++++|+.+.+.++++|++++++||
T Consensus 115 ~~~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fg 194 (490)
T PLN02500 115 SIGGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDSWKENSTFSAQDEAKKFTFNLMAKHIMS 194 (490)
T ss_pred HHHHHhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCCCCEEehHHHHHHHHHHHHHHHhC
Confidence 77777 11222222222223344567999999999999999999999
Q ss_pred CC
Q 047558 118 SN 119 (120)
Q Consensus 118 ~~ 119 (120)
.+
T Consensus 195 ~~ 196 (490)
T PLN02500 195 MD 196 (490)
T ss_pred CC
Confidence 75
No 14
>PLN00168 Cytochrome P450; Provisional
Probab=99.50 E-value=1e-12 Score=92.67 Aligned_cols=91 Identities=21% Similarity=0.280 Sum_probs=73.3
Q ss_pred CCCCCCCCCCcccccccccC---CChhHHHHHHHHhhCCceeeec-----------------------------------
Q 047558 30 KQVRPGPKPYPVIGNLLEPG---GKPHKSLANLTKIHGRIMSLKT----------------------------------- 71 (120)
Q Consensus 30 ~~~~p~p~~~p~~g~~~~~~---~~~~~~~~~~~~~yg~~~~~~~----------------------------------- 71 (120)
.+.||||+++|++|+...+. ..++..+.++.++||+++++++
T Consensus 34 ~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~~ 113 (519)
T PLN00168 34 RRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASSR 113 (519)
T ss_pred CCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccchh
Confidence 45788999999999987553 3467889999999999999887
Q ss_pred -----------------cHHHH--------------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHHH
Q 047558 72 -----------------WPDLR--------------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSNT 114 (120)
Q Consensus 72 -----------------W~~~R--------------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~~ 114 (120)
|+.+| +++++.+++.+.+....++++|+.+.+..+++++++.+
T Consensus 114 ~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~~~ 193 (519)
T PLN00168 114 LLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLLVLM 193 (519)
T ss_pred hhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHH
Confidence 77765 45667777777654444557899999999999999999
Q ss_pred HhcCCC
Q 047558 115 IFSSNL 120 (120)
Q Consensus 115 ~fg~~~ 120 (120)
+||.++
T Consensus 194 ~fG~~~ 199 (519)
T PLN00168 194 CFGERL 199 (519)
T ss_pred HcCCCc
Confidence 999863
No 15
>PLN02655 ent-kaurene oxidase
Probab=99.48 E-value=4.2e-13 Score=93.52 Aligned_cols=87 Identities=23% Similarity=0.386 Sum_probs=71.1
Q ss_pred CCCCCCCcccccccccC-CChhHHHHHHHHhhCCceeeec----------------------------------------
Q 047558 33 RPGPKPYPVIGNLLEPG-GKPHKSLANLTKIHGRIMSLKT---------------------------------------- 71 (120)
Q Consensus 33 ~p~p~~~p~~g~~~~~~-~~~~~~~~~~~~~yg~~~~~~~---------------------------------------- 71 (120)
||||+++|++||++++. ++++..+.+++++||+++++++
T Consensus 1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~ 80 (466)
T PLN02655 1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD 80 (466)
T ss_pred CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence 68999999999998875 5588999999999999998887
Q ss_pred ------------cHHHH--------------------HHHHHHHHHHHHHhCC--CCCceeHHHHHHHHHHHHHHHHHhc
Q 047558 72 ------------WPDLR--------------------RKKINDLLASVEENCP--AGKAIGFGQAAFHTSLNLSSNTIFS 117 (120)
Q Consensus 72 ------------W~~~R--------------------~~~~~~~~~~l~~~~~--~~~~~d~~~~~~~~t~dvi~~~~fg 117 (120)
|+.+| +++++.+++.+.+... .++++|+.+.+.++|+|++++++||
T Consensus 81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG 160 (466)
T PLN02655 81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG 160 (466)
T ss_pred CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence 66666 2345566666654433 4678999999999999999999999
Q ss_pred CC
Q 047558 118 SN 119 (120)
Q Consensus 118 ~~ 119 (120)
.+
T Consensus 161 ~~ 162 (466)
T PLN02655 161 ED 162 (466)
T ss_pred cc
Confidence 76
No 16
>PLN02774 brassinosteroid-6-oxidase
Probab=99.47 E-value=5.7e-13 Score=92.82 Aligned_cols=92 Identities=17% Similarity=0.174 Sum_probs=69.0
Q ss_pred hcCCCCCCCCCCcccccccccCCChhHHHHHHHHhhCCceeeec------------------------------------
Q 047558 28 RRKQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLKT------------------------------------ 71 (120)
Q Consensus 28 ~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~yg~~~~~~~------------------------------------ 71 (120)
.+.+.||||+++|++|+...+.++++..+.++.++||+++++++
T Consensus 28 ~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~ 107 (463)
T PLN02774 28 SKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLDI 107 (463)
T ss_pred CCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHHH
Confidence 34456789999999999877666677788999999999998886
Q ss_pred -------------cHHHH----------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHHHHhcCC
Q 047558 72 -------------WPDLR----------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSSN 119 (120)
Q Consensus 72 -------------W~~~R----------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~~~fg~~ 119 (120)
|+.+| .+.+++.++.+.+.+..++++|+.+.+..++++++++++||.+
T Consensus 108 lg~~~~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~ 184 (463)
T PLN02774 108 LGTCNIAAVHGSTHRYMRGSLLSLISPTMIRDHLLPKIDEFMRSHLSGWDGLKTIDIQEKTKEMALLSALKQIAGTL 184 (463)
T ss_pred hCccchhhcCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhCCCCCEEeeHHHHHHHHHHHHHHHcCCC
Confidence 77777 1122222333323344456799999999999999999999975
No 17
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.46 E-value=1.4e-12 Score=90.81 Aligned_cols=91 Identities=19% Similarity=0.301 Sum_probs=68.2
Q ss_pred hcCCCCCCCCCCccccccccc-CCChhHHHHHHHHhhCCceeeec-----------------------------------
Q 047558 28 RRKQVRPGPKPYPVIGNLLEP-GGKPHKSLANLTKIHGRIMSLKT----------------------------------- 71 (120)
Q Consensus 28 ~~~~~~p~p~~~p~~g~~~~~-~~~~~~~~~~~~~~yg~~~~~~~----------------------------------- 71 (120)
++.+.||||+++|++|+...+ .++++.++.++.++||+++++++
T Consensus 32 ~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~~~~~~~~ 111 (463)
T PLN02196 32 TKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTFPASKER 111 (463)
T ss_pred CCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCcccccCchHHHH
Confidence 445678888889999998765 47889999999999999998876
Q ss_pred --------------cHHHH---------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHHHHhcCC
Q 047558 72 --------------WPDLR---------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSSN 119 (120)
Q Consensus 72 --------------W~~~R---------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~~~fg~~ 119 (120)
|+++| ...+++.++.+.+.+. ++++|+.+.+..+++|+++.++||.+
T Consensus 112 ~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~~~~~~~~~~-~~~v~~~~~~~~~~~~v~~~~~fG~~ 187 (463)
T PLN02196 112 MLGKQAIFFHQGDYHAKLRKLVLRAFMPDAIRNMVPDIESIAQESLNSWE-GTQINTYQEMKTYTFNVALLSIFGKD 187 (463)
T ss_pred HcCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHcCC-CCeEEeHHHHHHHHHHHHHHHHcCCC
Confidence 77777 1222222222222232 45799999999999999999999976
No 18
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.43 E-value=7.6e-12 Score=88.02 Aligned_cols=93 Identities=15% Similarity=0.175 Sum_probs=64.7
Q ss_pred hhcCCCCCCCCCCcccccccccC---CChhHHHHHHHHhhCCceee---ec-----------------------------
Q 047558 27 RRRKQVRPGPKPYPVIGNLLEPG---GKPHKSLANLTKIHGRIMSL---KT----------------------------- 71 (120)
Q Consensus 27 ~~~~~~~p~p~~~p~~g~~~~~~---~~~~~~~~~~~~~yg~~~~~---~~----------------------------- 71 (120)
.++.+..|||+++|++||...+. ....+++.+...+||..+.+ ++
T Consensus 27 ~~~~~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~ 106 (500)
T PLN02169 27 HKKPHGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGP 106 (500)
T ss_pred HhccCCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcH
Confidence 44556789999999999987653 22344455555557755442 21
Q ss_pred --------------------cHHHH---------------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHH
Q 047558 72 --------------------WPDLR---------------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNL 110 (120)
Q Consensus 72 --------------------W~~~R---------------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dv 110 (120)
|+.+| +++++.+++.+.+.+.+++++|+.+.+.++|+|+
T Consensus 107 ~~~~~~~~~g~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dv 186 (500)
T PLN02169 107 EFKKIFDVLGEGILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDT 186 (500)
T ss_pred HHHHHHHhhcCcccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHH
Confidence 88888 1233455666655445567899999999999999
Q ss_pred HHHHHhcCC
Q 047558 111 SSNTIFSSN 119 (120)
Q Consensus 111 i~~~~fg~~ 119 (120)
|++++||.+
T Consensus 187 i~~~~fG~~ 195 (500)
T PLN02169 187 SSILMTGYD 195 (500)
T ss_pred HHhheeCCC
Confidence 999999975
No 19
>PLN03018 homomethionine N-hydroxylase
Probab=99.40 E-value=1e-11 Score=88.03 Aligned_cols=89 Identities=18% Similarity=0.326 Sum_probs=68.2
Q ss_pred CCCCCCCCCcccccccccC-CChh-HHHHHHHHhh-CCceeeec------------------------------------
Q 047558 31 QVRPGPKPYPVIGNLLEPG-GKPH-KSLANLTKIH-GRIMSLKT------------------------------------ 71 (120)
Q Consensus 31 ~~~p~p~~~p~~g~~~~~~-~~~~-~~~~~~~~~y-g~~~~~~~------------------------------------ 71 (120)
+.||||+++|++||++++. +++. ....+..++| |+++++++
T Consensus 40 ~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~ 119 (534)
T PLN03018 40 QLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMET 119 (534)
T ss_pred CCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhh
Confidence 4689999999999998863 2232 3455555555 78888877
Q ss_pred ----------------cHHHH--------------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHHHH
Q 047558 72 ----------------WPDLR--------------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSNTI 115 (120)
Q Consensus 72 ----------------W~~~R--------------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~~~ 115 (120)
|+.+| +++++++++.+.+.++.++++|+.+.+.++|+|+|++++
T Consensus 120 l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~~ 199 (534)
T PLN03018 120 IGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRML 199 (534)
T ss_pred hccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHHH
Confidence 88887 245667787776555555679999999999999999999
Q ss_pred hcCC
Q 047558 116 FSSN 119 (120)
Q Consensus 116 fg~~ 119 (120)
||.+
T Consensus 200 fG~~ 203 (534)
T PLN03018 200 FGRR 203 (534)
T ss_pred hCCc
Confidence 9986
No 20
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.40 E-value=5.7e-13 Score=91.30 Aligned_cols=87 Identities=24% Similarity=0.517 Sum_probs=72.5
Q ss_pred CCCCCCCcccccccccC--CChhHHHHHHHHhhCCceeeec---------------------------------------
Q 047558 33 RPGPKPYPVIGNLLEPG--GKPHKSLANLTKIHGRIMSLKT--------------------------------------- 71 (120)
Q Consensus 33 ~p~p~~~p~~g~~~~~~--~~~~~~~~~~~~~yg~~~~~~~--------------------------------------- 71 (120)
||||+++|++|+...+. ++++..+.+++++||++++++.
T Consensus 1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~ 80 (463)
T PF00067_consen 1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG 80 (463)
T ss_dssp SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence 78999999999998875 6678889999999999999987
Q ss_pred --------------cHHHH-------------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHHHHhcC
Q 047558 72 --------------WPDLR-------------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSS 118 (120)
Q Consensus 72 --------------W~~~R-------------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~~~fg~ 118 (120)
|+.+| +++++.+++.+.+....++++|+.+.+..+++|++++++||.
T Consensus 81 ~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~fG~ 160 (463)
T PF00067_consen 81 PFGGKGLFFSDGERWRRQRRLLAPAFSSKKILKLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVLFGK 160 (463)
T ss_dssp HHTTTSSTTSSHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHHHSS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccc
Confidence 66655 345666677776655555579999999999999999999997
Q ss_pred C
Q 047558 119 N 119 (120)
Q Consensus 119 ~ 119 (120)
+
T Consensus 161 ~ 161 (463)
T PF00067_consen 161 D 161 (463)
T ss_dssp H
T ss_pred e
Confidence 5
No 21
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.40 E-value=1.9e-11 Score=85.58 Aligned_cols=87 Identities=22% Similarity=0.312 Sum_probs=65.4
Q ss_pred cCCCCCCCCCCccccccccc-----CCChhHHHHHHHHhhCC--ceeeec------------------------------
Q 047558 29 RKQVRPGPKPYPVIGNLLEP-----GGKPHKSLANLTKIHGR--IMSLKT------------------------------ 71 (120)
Q Consensus 29 ~~~~~p~p~~~p~~g~~~~~-----~~~~~~~~~~~~~~yg~--~~~~~~------------------------------ 71 (120)
+.+.||||+++|++|+++.+ .++++..+.+++++||+ ++++++
T Consensus 40 ~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~~f~~~~~~ 119 (490)
T PLN02302 40 QPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDDAFEPGWPE 119 (490)
T ss_pred CCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCCccccCCch
Confidence 34678999999999998765 24678889999999997 677655
Q ss_pred ------------------cHHHH--------------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHH
Q 047558 72 ------------------WPDLR--------------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSN 113 (120)
Q Consensus 72 ------------------W~~~R--------------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~ 113 (120)
|+.+| +++++++++. ..+++.+|+.+.+..+++|++++
T Consensus 120 ~~~~~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~i~~~v~~~~~~----~~~~~~v~~~~~~~~~~~~vi~~ 195 (490)
T PLN02302 120 STVELIGRKSFVGITGEEHKRLRRLTAAPVNGPEALSTYIPYIEENVKSCLEK----WSKMGEIEFLTELRKLTFKIIMY 195 (490)
T ss_pred hHHHHhccccccccCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH----hcCCCCEehHHHHHHHHHHHHHH
Confidence 67766 1222223222 23345699999999999999999
Q ss_pred HHhcCC
Q 047558 114 TIFSSN 119 (120)
Q Consensus 114 ~~fg~~ 119 (120)
++||.+
T Consensus 196 ~~~G~~ 201 (490)
T PLN02302 196 IFLSSE 201 (490)
T ss_pred HHcCCC
Confidence 999976
No 22
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=99.39 E-value=1.2e-11 Score=87.03 Aligned_cols=88 Identities=25% Similarity=0.359 Sum_probs=66.0
Q ss_pred cCCCCCCCCCCcccccccccC-C--ChhHHHHHHHHhhCCceeeec----------------------------------
Q 047558 29 RKQVRPGPKPYPVIGNLLEPG-G--KPHKSLANLTKIHGRIMSLKT---------------------------------- 71 (120)
Q Consensus 29 ~~~~~p~p~~~p~~g~~~~~~-~--~~~~~~~~~~~~yg~~~~~~~---------------------------------- 71 (120)
+...+|||+++|++|+...+. . ....++.++..+||++++.++
T Consensus 33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~ 112 (497)
T KOG0157|consen 33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES 112 (497)
T ss_pred HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence 456789999999999998874 2 466788899999998777766
Q ss_pred ----------------cHHHH-------------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHHHHh
Q 047558 72 ----------------WPDLR-------------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSNTIF 116 (120)
Q Consensus 72 ----------------W~~~R-------------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~~~f 116 (120)
|+.+| .++...+...+.. ...++.+|+++.++++|+|+||+++|
T Consensus 113 ~~~~lG~gll~~~g~~W~~~Rk~~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~tld~i~~~~~ 191 (497)
T KOG0157|consen 113 LKPWLGDGLLFSDGEKWHKHRKLLTPAFHFEILKSFVPVFIESSLILLLLLEL-AASGEEVDLQDLLKRLTLDIICKTAM 191 (497)
T ss_pred HHHHhcCccccCCchHHHHHHhhccHhhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCeEcHHHHHHHHHHHHHHHHhc
Confidence 77777 2333333333332 23333499999999999999999999
Q ss_pred c
Q 047558 117 S 117 (120)
Q Consensus 117 g 117 (120)
|
T Consensus 192 G 192 (497)
T KOG0157|consen 192 G 192 (497)
T ss_pred C
Confidence 9
No 23
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.38 E-value=8.7e-12 Score=87.19 Aligned_cols=91 Identities=15% Similarity=0.245 Sum_probs=66.9
Q ss_pred hhcCCCCCCCCCCcccccccccC-----CChhHHHHHHHHhhCCceeeec------------------------------
Q 047558 27 RRRKQVRPGPKPYPVIGNLLEPG-----GKPHKSLANLTKIHGRIMSLKT------------------------------ 71 (120)
Q Consensus 27 ~~~~~~~p~p~~~p~~g~~~~~~-----~~~~~~~~~~~~~yg~~~~~~~------------------------------ 71 (120)
+++.+.||||.++|++||.+.+. +++...+.++.++||+++++++
T Consensus 26 ~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~ 105 (472)
T PLN02987 26 YRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYP 105 (472)
T ss_pred cCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCc
Confidence 44455688999999999987752 4578888999999999988876
Q ss_pred -------------------cHHHHH----------------HHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHHHHh
Q 047558 72 -------------------WPDLRR----------------KKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSNTIF 116 (120)
Q Consensus 72 -------------------W~~~R~----------------~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~~~f 116 (120)
|+++|. ++++++++...+.+ ++++|+.+.+.++++|++++++|
T Consensus 106 ~~~~~~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~t~~vi~~~~f 183 (472)
T PLN02987 106 GSISNLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIKDHLLLDIDRLIRFNLDSW--SSRVLLMEEAKKITFELTVKQLM 183 (472)
T ss_pred HHHHHHhCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhh--ccceehHHHHHHHHHHHHHHHHc
Confidence 777771 11222322222222 24699999999999999999999
Q ss_pred cCC
Q 047558 117 SSN 119 (120)
Q Consensus 117 g~~ 119 (120)
|.+
T Consensus 184 g~~ 186 (472)
T PLN02987 184 SFD 186 (472)
T ss_pred CCC
Confidence 965
No 24
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.37 E-value=5.3e-12 Score=87.75 Aligned_cols=92 Identities=10% Similarity=0.242 Sum_probs=69.2
Q ss_pred hcCCCCCCCCCCcccccccccC-----CChhHHHHHHHHhhCCceeeec-------------------------------
Q 047558 28 RRKQVRPGPKPYPVIGNLLEPG-----GKPHKSLANLTKIHGRIMSLKT------------------------------- 71 (120)
Q Consensus 28 ~~~~~~p~p~~~p~~g~~~~~~-----~~~~~~~~~~~~~yg~~~~~~~------------------------------- 71 (120)
++.+.||||.++|++|+.+.+. ++++.++.++.++||+++++++
T Consensus 4 ~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~ 83 (452)
T PLN03141 4 KKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPK 83 (452)
T ss_pred CCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCch
Confidence 3456788999999999988762 4678889999999999999887
Q ss_pred ------------------cHHHH----------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHHHHhc
Q 047558 72 ------------------WPDLR----------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSNTIFS 117 (120)
Q Consensus 72 ------------------W~~~R----------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~~~fg 117 (120)
||++| .+++.+.++...+.+..++++|+.+.+..+++|++++++||
T Consensus 84 ~~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~G 163 (452)
T PLN03141 84 SLTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYVSESLDSWRDDPPVLVQDETKKIAFEVLVKALIS 163 (452)
T ss_pred hHHHHhCcccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhccCCCCEEhHHHHHHHHHHHHHHHHcC
Confidence 67666 11222222222223344668999999999999999999999
Q ss_pred CC
Q 047558 118 SN 119 (120)
Q Consensus 118 ~~ 119 (120)
.+
T Consensus 164 ~~ 165 (452)
T PLN03141 164 LE 165 (452)
T ss_pred CC
Confidence 75
No 25
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.33 E-value=3.1e-11 Score=85.18 Aligned_cols=90 Identities=20% Similarity=0.324 Sum_probs=63.1
Q ss_pred CCCCCCCCCCcccccccccCCChhHHHHHHHHhh---CCceeeec-----------------------------------
Q 047558 30 KQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIH---GRIMSLKT----------------------------------- 71 (120)
Q Consensus 30 ~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~y---g~~~~~~~----------------------------------- 71 (120)
.+.+|||+++|++|+...+.++ +..+.++.++| |+++++++
T Consensus 29 ~~~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~ 107 (516)
T PLN03195 29 QRNRKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYM 107 (516)
T ss_pred ccccCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHH
Confidence 3457899999999997654322 33455666666 78888776
Q ss_pred ---------------cHHHH--------------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHHHHh
Q 047558 72 ---------------WPDLR--------------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSNTIF 116 (120)
Q Consensus 72 ---------------W~~~R--------------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~~~f 116 (120)
|+.+| ++.++.+++.+.+..++++++|+.+.+..+++|+|++++|
T Consensus 108 ~~~~g~~l~~~~g~~w~~~Rr~l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~f 187 (516)
T PLN03195 108 EVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVGF 187 (516)
T ss_pred HHHhcCeeeccCcHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHHh
Confidence 67766 1223344444543334567899999999999999999999
Q ss_pred cCCC
Q 047558 117 SSNL 120 (120)
Q Consensus 117 g~~~ 120 (120)
|.++
T Consensus 188 G~~~ 191 (516)
T PLN03195 188 GVEI 191 (516)
T ss_pred CCCc
Confidence 9863
No 26
>PLN02936 epsilon-ring hydroxylase
Probab=99.20 E-value=1.3e-10 Score=81.66 Aligned_cols=88 Identities=22% Similarity=0.304 Sum_probs=70.0
Q ss_pred CCCCCCCccccccccc-----CCChhHHHHHHHHhhCCceeeec------------------------------------
Q 047558 33 RPGPKPYPVIGNLLEP-----GGKPHKSLANLTKIHGRIMSLKT------------------------------------ 71 (120)
Q Consensus 33 ~p~p~~~p~~g~~~~~-----~~~~~~~~~~~~~~yg~~~~~~~------------------------------------ 71 (120)
-.|..++|++|+..+. .+.++..+.+++++||+++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~ 93 (489)
T PLN02936 14 WGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEF 93 (489)
T ss_pred CCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHH
Confidence 3466789999987654 25678899999999999998876
Q ss_pred -------------cHHHH--------------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHHHHhcC
Q 047558 72 -------------WPDLR--------------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSS 118 (120)
Q Consensus 72 -------------W~~~R--------------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~~~fg~ 118 (120)
|+.+| +++++.+++.+.+.+++|+++|+.+.++++++|+|++++||.
T Consensus 94 ~~~~~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~fG~ 173 (489)
T PLN02936 94 LFGSGFAIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSVFNY 173 (489)
T ss_pred HhcCccccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHcCC
Confidence 77666 233566777776555566789999999999999999999998
Q ss_pred CC
Q 047558 119 NL 120 (120)
Q Consensus 119 ~~ 120 (120)
++
T Consensus 174 ~~ 175 (489)
T PLN02936 174 NF 175 (489)
T ss_pred Cc
Confidence 74
No 27
>PLN02738 carotene beta-ring hydroxylase
Probab=99.17 E-value=3.2e-10 Score=81.84 Aligned_cols=71 Identities=15% Similarity=0.253 Sum_probs=59.6
Q ss_pred CChhHHHHHHHHhhCCceeeec-------------------------------------------------cHHHH----
Q 047558 50 GKPHKSLANLTKIHGRIMSLKT-------------------------------------------------WPDLR---- 76 (120)
Q Consensus 50 ~~~~~~~~~~~~~yg~~~~~~~-------------------------------------------------W~~~R---- 76 (120)
++.+..+.+++++||+++++++ |+.+|
T Consensus 151 g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~~l~~~dge~wr~rRr~l~ 230 (633)
T PLN02738 151 EAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIV 230 (633)
T ss_pred chHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccCCceecCCcHHHHHHHHhcc
Confidence 5577889999999999999874 67666
Q ss_pred ---------------HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHHHHhcCCC
Q 047558 77 ---------------RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSSNL 120 (120)
Q Consensus 77 ---------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~~~fg~~~ 120 (120)
.++++++++.+.+...+|+++|+.+.+..+|+|||++++||.++
T Consensus 231 p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~ 289 (633)
T PLN02738 231 PALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDF 289 (633)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCc
Confidence 46677888888665566789999999999999999999999763
No 28
>PLN02648 allene oxide synthase
Probab=99.09 E-value=5.9e-10 Score=78.21 Aligned_cols=89 Identities=11% Similarity=0.200 Sum_probs=69.2
Q ss_pred CCCCCCCCCccccccccc-----CCChhHHHHHHHHhhCC-ceeeec---------------------------------
Q 047558 31 QVRPGPKPYPVIGNLLEP-----GGKPHKSLANLTKIHGR-IMSLKT--------------------------------- 71 (120)
Q Consensus 31 ~~~p~p~~~p~~g~~~~~-----~~~~~~~~~~~~~~yg~-~~~~~~--------------------------------- 71 (120)
+.|||+.++|++|+..++ ..++..++.+..+|||+ +|++++
T Consensus 17 ~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~~ 96 (480)
T PLN02648 17 REIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDKR 96 (480)
T ss_pred CCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcccc
Confidence 458899999999998753 35567899999999998 887653
Q ss_pred -----------------------------cHHHH------------------HHHHHHHHHHHHHhCCCCCceeHHHHHH
Q 047558 72 -----------------------------WPDLR------------------RKKINDLLASVEENCPAGKAIGFGQAAF 104 (120)
Q Consensus 72 -----------------------------W~~~R------------------~~~~~~~~~~l~~~~~~~~~~d~~~~~~ 104 (120)
|+++| +++++++++.|.+....++++|+.+.+.
T Consensus 97 ~~~~~~~~~~~~l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~vdv~~~~~ 176 (480)
T PLN02648 97 DVFTGTYMPSTAFTGGYRVLSYLDPSEPKHAKLKSFLFELLKSRHRRFIPEFRAAFAELFDTWEAELAKKGKAEFNDPLD 176 (480)
T ss_pred ccceeeeccCccccCCceeeeecCCCCchHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhhCCCccccchHH
Confidence 45555 4566666777744324455799999999
Q ss_pred HHHHHHHHHHHhcCC
Q 047558 105 HTSLNLSSNTIFSSN 119 (120)
Q Consensus 105 ~~t~dvi~~~~fg~~ 119 (120)
++|+|++++++||.+
T Consensus 177 ~lt~~vi~~~lfG~~ 191 (480)
T PLN02648 177 QMAFNFLCKALTGKD 191 (480)
T ss_pred HHHHHHHHHHHcCCC
Confidence 999999999999975
No 29
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.93 E-value=5.2e-09 Score=72.87 Aligned_cols=89 Identities=25% Similarity=0.378 Sum_probs=73.2
Q ss_pred CCCCCCCCccccccccc---C-CChhHHHHHHHHhhCCceeeec------------------------------------
Q 047558 32 VRPGPKPYPVIGNLLEP---G-GKPHKSLANLTKIHGRIMSLKT------------------------------------ 71 (120)
Q Consensus 32 ~~p~p~~~p~~g~~~~~---~-~~~~~~~~~~~~~yg~~~~~~~------------------------------------ 71 (120)
-+|+|..+|++|.+..+ . .+.|+.....+++||+|++..+
T Consensus 51 ~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~~P~Rp~~~~~w~ 130 (519)
T KOG0159|consen 51 EIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGKYPFRPLLIEPWV 130 (519)
T ss_pred hcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCCCCCcccccchhh
Confidence 36888899999987633 2 6789999999999999999883
Q ss_pred -------------------cHHHH--------------------HHHHHHHHHHHHHhCC---CCCceeHHHHHHHHHHH
Q 047558 72 -------------------WPDLR--------------------RKKINDLLASVEENCP---AGKAIGFGQAAFHTSLN 109 (120)
Q Consensus 72 -------------------W~~~R--------------------~~~~~~~~~~l~~~~~---~~~~~d~~~~~~~~t~d 109 (120)
|++.| ++.++++++.+++..+ +..+.|+.+.+.+++++
T Consensus 131 ~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~wslE 210 (519)
T KOG0159|consen 131 AYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWSLE 210 (519)
T ss_pred hhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHH
Confidence 76666 6778888888876433 44578999999999999
Q ss_pred HHHHHHhcCCC
Q 047558 110 LSSNTIFSSNL 120 (120)
Q Consensus 110 vi~~~~fg~~~ 120 (120)
+||.++||+++
T Consensus 211 si~~V~l~~rl 221 (519)
T KOG0159|consen 211 SICLVLLGTRL 221 (519)
T ss_pred HHHHHHHhccc
Confidence 99999999874
No 30
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=98.52 E-value=6.2e-06 Score=58.54 Aligned_cols=39 Identities=13% Similarity=0.126 Sum_probs=29.4
Q ss_pred HHHHHHHHhC--CCCCceeHHHHHHHHHHHHHHHHHhcCCC
Q 047558 82 DLLASVEENC--PAGKAIGFGQAAFHTSLNLSSNTIFSSNL 120 (120)
Q Consensus 82 ~~~~~l~~~~--~~~~~~d~~~~~~~~t~dvi~~~~fg~~~ 120 (120)
.+++.+.+.. ..++++|+.+.++++|+|+|++++||.++
T Consensus 162 ~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~ 202 (502)
T PLN02426 162 RLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDP 202 (502)
T ss_pred HHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCC
Confidence 4444454332 22467999999999999999999999863
No 31
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.44 E-value=5.2e-06 Score=57.47 Aligned_cols=41 Identities=24% Similarity=0.302 Sum_probs=35.7
Q ss_pred CCCCCCCC-CcccccccccCCChhHHHHHHHHhhCCceeeec
Q 047558 31 QVRPGPKP-YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLKT 71 (120)
Q Consensus 31 ~~~p~p~~-~p~~g~~~~~~~~~~~~~~~~~~~yg~~~~~~~ 71 (120)
+.||--.+ .|++|....+.++|.+++++.++|||++|++.+
T Consensus 31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l 72 (486)
T KOG0684|consen 31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLL 72 (486)
T ss_pred CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEE
Confidence 35665554 689999999999999999999999999999988
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=90.06 E-value=1.1 Score=31.40 Aligned_cols=24 Identities=13% Similarity=-0.043 Sum_probs=21.9
Q ss_pred CceeHHHHHHHHHHHHHHHHHhcCC
Q 047558 95 KAIGFGQAAFHTSLNLSSNTIFSSN 119 (120)
Q Consensus 95 ~~~d~~~~~~~~t~dvi~~~~fg~~ 119 (120)
+.+++.+.+..+++++|+ .+||.+
T Consensus 137 ~~~~v~~~a~~l~~~vi~-~l~Gv~ 160 (411)
T COG2124 137 GADLVLDFAAELTLRVIA-ELLGVP 160 (411)
T ss_pred CchhHHHHhhhhhHHHHH-HHhCCC
Confidence 678899999999999999 999965
No 33
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].
Probab=64.62 E-value=15 Score=24.98 Aligned_cols=6 Identities=33% Similarity=0.623 Sum_probs=2.3
Q ss_pred HHHHhh
Q 047558 23 FISRRR 28 (120)
Q Consensus 23 ~~~~~~ 28 (120)
.++++|
T Consensus 278 ILRYRR 283 (299)
T PF02009_consen 278 ILRYRR 283 (299)
T ss_pred HHHHHH
Confidence 334333
No 34
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].
Probab=60.97 E-value=16 Score=24.94 Aligned_cols=18 Identities=6% Similarity=0.384 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 047558 11 LVFTFVWVMALSFISRRR 28 (120)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~ 28 (120)
+++.++.|++++++|++.
T Consensus 269 VLIMvIIYLILRYRRKKK 286 (299)
T PF02009_consen 269 VLIMVIIYLILRYRRKKK 286 (299)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 334456677788887543
No 35
>PF15330 SIT: SHP2-interacting transmembrane adaptor protein, SIT
Probab=57.72 E-value=34 Score=19.52 Aligned_cols=11 Identities=36% Similarity=0.365 Sum_probs=7.4
Q ss_pred CCccccccccc
Q 047558 38 PYPVIGNLLEP 48 (120)
Q Consensus 38 ~~p~~g~~~~~ 48 (120)
.-|+.||+...
T Consensus 45 ~~p~YgNL~~~ 55 (107)
T PF15330_consen 45 DDPCYGNLELQ 55 (107)
T ss_pred CCccccccccc
Confidence 46788887653
No 36
>PHA02513 V1 structural protein V1; Reviewed
Probab=49.04 E-value=51 Score=18.99 Aligned_cols=46 Identities=9% Similarity=0.098 Sum_probs=32.8
Q ss_pred cHHHHHHHHHHHHHHHHH--hCCCCCceeHHHHHHHHHHHHHHHHHhc
Q 047558 72 WPDLRRKKINDLLASVEE--NCPAGKAIGFGQAAFHTSLNLSSNTIFS 117 (120)
Q Consensus 72 W~~~R~~~~~~~~~~l~~--~~~~~~~~d~~~~~~~~t~dvi~~~~fg 117 (120)
|...--..++++++.-.+ +...|+..|+...+..+.+-+++-+.|+
T Consensus 38 wdgnii~sa~~fveva~~npkltkge~~n~k~ii~L~IFIliGivl~~ 85 (135)
T PHA02513 38 WDGNIISSARRFVEVAKANPKLTKGEGTNIGVLLGLFIFILIGIVLLP 85 (135)
T ss_pred cCchHHHHHHHHHHHHhcCCcccccccccHHHHHHHHHHHHHHHHHhh
Confidence 443334566677765543 2345677899999999999999988875
No 37
>TIGR01477 RIFIN variant surface antigen, rifin family. This model represents the rifin branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of rifin sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 20 bits.
Probab=44.99 E-value=48 Score=23.27 Aligned_cols=9 Identities=22% Similarity=0.438 Sum_probs=3.7
Q ss_pred HHHHHHhhc
Q 047558 21 LSFISRRRR 29 (120)
Q Consensus 21 ~~~~~~~~~ 29 (120)
|..+|++|+
T Consensus 330 YLILRYRRK 338 (353)
T TIGR01477 330 YLILRYRRK 338 (353)
T ss_pred HHHHHhhhc
Confidence 333444443
No 38
>PTZ00046 rifin; Provisional
Probab=44.00 E-value=50 Score=23.21 Aligned_cols=9 Identities=22% Similarity=0.438 Sum_probs=3.7
Q ss_pred HHHHHHhhc
Q 047558 21 LSFISRRRR 29 (120)
Q Consensus 21 ~~~~~~~~~ 29 (120)
|..+|++|+
T Consensus 335 YLILRYRRK 343 (358)
T PTZ00046 335 YLILRYRRK 343 (358)
T ss_pred HHHHHhhhc
Confidence 333444443
No 39
>PRK09702 PTS system arbutin-specific transporter subunit IIB; Provisional
Probab=42.71 E-value=81 Score=19.46 Aligned_cols=24 Identities=17% Similarity=0.336 Sum_probs=11.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Q 047558 2 DLLISCILWLVFTFVWVMALSFIS 25 (120)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~ 25 (120)
.|+..+.++++..++.++++++.-
T Consensus 8 ~~~~~i~iGl~~f~iYyfvF~flI 31 (161)
T PRK09702 8 MMLTQIAIGLCFTLLYFVVFRTLI 31 (161)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHH
Confidence 344455555554444444444443
No 40
>PRK04778 septation ring formation regulator EzrA; Provisional
Probab=41.93 E-value=1.5e+02 Score=22.28 Aligned_cols=23 Identities=9% Similarity=0.192 Sum_probs=16.0
Q ss_pred CCChhHHHHHHHHhhCCceeeec
Q 047558 49 GGKPHKSLANLTKIHGRIMSLKT 71 (120)
Q Consensus 49 ~~~~~~~~~~~~~~yg~~~~~~~ 71 (120)
.+.....+..|.++|..+....+
T Consensus 59 ~Ges~~~f~~w~~~~~~i~~~~~ 81 (569)
T PRK04778 59 TGQSEEKFEEWRQKWDEIVTNSL 81 (569)
T ss_pred CcccHHHHHHHHHHHHHHHHhhh
Confidence 46667788888888866555554
No 41
>TIGR01477 RIFIN variant surface antigen, rifin family. This model represents the rifin branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of rifin sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 20 bits.
Probab=41.50 E-value=47 Score=23.30 Aligned_cols=19 Identities=11% Similarity=0.359 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHhhcC
Q 047558 12 VFTFVWVMALSFISRRRRK 30 (120)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~ 30 (120)
++.++.|++.+++|+..-.
T Consensus 324 LIMvIIYLILRYRRKKKMk 342 (353)
T TIGR01477 324 LIMVIIYLILRYRRKKKMK 342 (353)
T ss_pred HHHHHHHHHHHhhhcchhH
Confidence 3346678888888776543
No 42
>PTZ00046 rifin; Provisional
Probab=41.41 E-value=46 Score=23.40 Aligned_cols=19 Identities=11% Similarity=0.359 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHhhcC
Q 047558 12 VFTFVWVMALSFISRRRRK 30 (120)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~ 30 (120)
++.++.|++.+++|+..-.
T Consensus 329 LIMvIIYLILRYRRKKKMk 347 (358)
T PTZ00046 329 LIMVIIYLILRYRRKKKMK 347 (358)
T ss_pred HHHHHHHHHHHhhhcchhH
Confidence 3346678888888776543
No 43
>PF01707 Peptidase_C9: Peptidase family C9; InterPro: IPR002620 The family of alphaviruses includes 26 known members. They infect a variety of hosts including mosquitoes, birds, rodents and other mammals with worldwide distribution. Alphaviruses also pose a potential threat to human health in many area. For example, Venezuelan Equine Encephalitis Virus (VEEV) causes encephalitis in humans as well as livestock in Central and South America, and some variants of Sinbis Virus (SIN) and Semliki Forest Virus (SFV) have been found to cause fever and arthritis in humans []. Alphaviruses possess a single-stranded RNA genome of approximately 12 kb. The genomic RNA of alphaviruses is translated into two polyproteins that, respectively, encode structural proteins and nonstructural proteins. The nonstructural proteins may be translated as one or two polyproteins, nsp123 or nsp1234, depending on the virus. These polyproteins are cleaved to generate nsp1, nsp2, nsp3 and nsp4 by a protease activity that resides within nsp2 []. The nsp2 protein of alphaviruses has multiple enzymatic acivities. Its N-terminal domain has been shown to possess ATPase and GTPase activity, RNA helicase activity and RNA 5'-triphosphatase activity []. The C-terminal nsp2pro domain of nsp2 is responsible for the regulation of 26S subgenome RNA synthesis, switching between negative- and positive-strand RNA synthesis, targeting nsp2 for nuclear transport and proteolytic processing of the nonstructural polyprotein [, ]. The nsp2pro domain is a member of peptidase family C9 of clan CA. The nsp2pro domain consists of two distinct subdomains. The nsp2pro N-terminal subdomain is largely alpha-helical and contains the catalytic dyad cysteine and histidine residues organised in a protein fold that differs significantly from any known cysteine protease or protein folds. The nsp2pro C-terminal subdomain displays structural similarity to S-adenosyl- L-methionine-dependent RNA methyltransferases and provides essential elements that contribute to substrate recognition and may also regulate the structure of the substrate binding cleft []. This entry represents the nsp2pro domain.; PDB: 3TRK_A 2HWK_A.
Probab=41.19 E-value=26 Score=22.26 Aligned_cols=19 Identities=21% Similarity=0.244 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHhcCCC
Q 047558 102 AAFHTSLNLSSNTIFSSNL 120 (120)
Q Consensus 102 ~~~~~t~dvi~~~~fg~~~ 120 (120)
+=-.+++|.||.-.||.|+
T Consensus 84 ~S~e~ALn~ictr~fG~DL 102 (202)
T PF01707_consen 84 YSPEVALNEICTRFFGVDL 102 (202)
T ss_dssp --HHHHHHHHHHHHHSS-G
T ss_pred cCHHHHHHHHHHHHhcccc
Confidence 3456899999999999985
No 44
>PF05613 Herpes_U15: Human herpesvirus U15 protein; InterPro: IPR008644 U15 is an ORF present in human herpesvirus 6 (HHV-6) that was initially isolated from patients with the AIDS and lymphoproliferative disorders, but was subsequently shown to be responsible for the common childhood disease exanthema subitum (roseola). Several gene fragments of HHV-6 have been shown to activate the human immunodeficiency virus (HIV) type 1 long terminal repeat (LTR) []. The ORF U15 encodes a protein of 110 amino acids, whose function in unknown.
Probab=39.21 E-value=20 Score=19.56 Aligned_cols=14 Identities=21% Similarity=0.515 Sum_probs=10.1
Q ss_pred cHHHHHHHHHHHHH
Q 047558 72 WPDLRRKKINDLLA 85 (120)
Q Consensus 72 W~~~R~~~~~~~~~ 85 (120)
||++|-+++.+++.
T Consensus 4 wkrqrlqe~relcp 17 (110)
T PF05613_consen 4 WKRQRLQECRELCP 17 (110)
T ss_pred HHHHHHHHHHHhCC
Confidence 89999777666543
No 45
>PF07960 CBP4: CBP4; InterPro: IPR012420 The CBP4 gene in Saccharomyces cerevisiae is essential for the expression and activity of ubiquinol-cytochrome c reductase [, ]. This family appears to be fungal specific.
Probab=35.97 E-value=73 Score=18.90 Aligned_cols=23 Identities=17% Similarity=0.497 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCC
Q 047558 73 PDLRRKKINDLLASVEENCPAGK 95 (120)
Q Consensus 73 ~~~R~~~~~~~~~~l~~~~~~~~ 95 (120)
+..|+++-++++..+.+.+.+.+
T Consensus 52 r~~Rq~e~~~~~~~lKe~skSdk 74 (128)
T PF07960_consen 52 RELRQQEFDEFMKILKETSKSDK 74 (128)
T ss_pred HHHHHHHHHHHHHHHHHHhccCC
Confidence 55678888999999987655433
No 46
>PRK03427 cell division protein ZipA; Provisional
Probab=34.52 E-value=74 Score=22.19 Aligned_cols=19 Identities=11% Similarity=0.020 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 047558 5 ISCILWLVFTFVWVMALSF 23 (120)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~ 23 (120)
+++.+++++++.+++.-.|
T Consensus 8 iLivvGAIAIiAlL~HGlW 26 (333)
T PRK03427 8 ILIIVGAIAIIALLVHGFW 26 (333)
T ss_pred HHHHHHHHHHHHHHHHhhh
Confidence 4455555555555444433
No 47
>COG3115 ZipA Cell division protein [Cell division and chromosome partitioning]
Probab=34.16 E-value=63 Score=22.19 Aligned_cols=20 Identities=10% Similarity=0.021 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 047558 5 ISCILWLVFTFVWVMALSFI 24 (120)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~ 24 (120)
+++++++++++.+++...|.
T Consensus 7 ILIIvG~IAIiaLLvhGlWt 26 (324)
T COG3115 7 ILIIVGAIAIIALLVHGLWT 26 (324)
T ss_pred HHHHHHHHHHHHHHHhhhhh
Confidence 44555555544444444333
No 48
>PLN02196 abscisic acid 8'-hydroxylase
Probab=32.53 E-value=1.4e+02 Score=21.46 Aligned_cols=15 Identities=27% Similarity=0.213 Sum_probs=9.2
Q ss_pred HhhcCCCCCCCCCCc
Q 047558 26 RRRRKQVRPGPKPYP 40 (120)
Q Consensus 26 ~~~~~~~~p~p~~~p 40 (120)
...+.+..|+|++-+
T Consensus 27 ~~~~~~~~~~Ppgp~ 41 (463)
T PLN02196 27 RRSSSTKLPLPPGTM 41 (463)
T ss_pred ccCCCCCCCCCCCCC
Confidence 345567777776543
No 49
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=29.05 E-value=1.2e+02 Score=17.48 Aligned_cols=20 Identities=15% Similarity=0.240 Sum_probs=16.0
Q ss_pred hhHHHHHHHHhhCCceeeec
Q 047558 52 PHKSLANLTKIHGRIMSLKT 71 (120)
Q Consensus 52 ~~~~~~~~~~~yg~~~~~~~ 71 (120)
..+..-++..+||++-++++
T Consensus 31 TseemydlFGkyg~IrQIRi 50 (124)
T KOG0114|consen 31 TSEEMYDLFGKYGTIRQIRI 50 (124)
T ss_pred cHHHHHHHhhcccceEEEEe
Confidence 45566788889999988887
No 50
>TIGR02205 septum_zipA cell division protein ZipA. This model represents the full length of bacterial cell division protein ZipA. The N-terminal hydrophobic stretch is an uncleaved signal-anchor sequence. This is followed by an unconserved, variable length, low complexity region, and then a conserved C-terminal region of about 140 amino acids (see pfam04354) that interacts with the tubulin-like cell division protein FtsZ.
Probab=27.78 E-value=39 Score=22.90 Aligned_cols=16 Identities=13% Similarity=0.085 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHHHH
Q 047558 5 ISCILWLVFTFVWVMA 20 (120)
Q Consensus 5 ~~~~~~~~~~~~~~~~ 20 (120)
+++++++++++.+++.
T Consensus 5 iLIIvGaiaI~aLl~h 20 (284)
T TIGR02205 5 ILIIVGILAIAALLFH 20 (284)
T ss_pred hHHHHHHHHHHHHHHc
Confidence 3445555544444433
No 51
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=27.56 E-value=1.3e+02 Score=18.62 Aligned_cols=10 Identities=0% Similarity=0.072 Sum_probs=4.0
Q ss_pred HHHHHHHHHH
Q 047558 15 FVWVMALSFI 24 (120)
Q Consensus 15 ~~~~~~~~~~ 24 (120)
+++|++.+.+
T Consensus 108 ~i~yfvir~~ 117 (163)
T PF06679_consen 108 AILYFVIRTF 117 (163)
T ss_pred HHHHHHHHHH
Confidence 3344444433
No 52
>COG4459 NapE Periplasmic nitrate reductase system, NapE component [Energy production and conversion]
Probab=27.56 E-value=93 Score=15.62 Aligned_cols=12 Identities=25% Similarity=0.185 Sum_probs=6.8
Q ss_pred hhcCCCCCCCCC
Q 047558 27 RRRKQVRPGPKP 38 (120)
Q Consensus 27 ~~~~~~~p~p~~ 38 (120)
.+-.-+||||++
T Consensus 50 ~QiifGPPGpp~ 61 (62)
T COG4459 50 FQIIFGPPGPPG 61 (62)
T ss_pred HHHHhCCCCCCC
Confidence 333445777764
No 53
>COG1847 Jag Predicted RNA-binding protein [General function prediction only]
Probab=26.83 E-value=93 Score=20.14 Aligned_cols=50 Identities=12% Similarity=0.223 Sum_probs=30.3
Q ss_pred hhCCceeeec----cHHHHHHHHHHHHHHHHHhC-CCCCceeH---HHHHHHHHHHHH
Q 047558 62 IHGRIMSLKT----WPDLRRKKINDLLASVEENC-PAGKAIGF---GQAAFHTSLNLS 111 (120)
Q Consensus 62 ~yg~~~~~~~----W~~~R~~~~~~~~~~l~~~~-~~~~~~d~---~~~~~~~t~dvi 111 (120)
.+|.-+++.+ |+..|.+....+.+.+.+.. +.|+++.+ .+.=.+.+.+++
T Consensus 127 ~~g~~~~v~ldv~~yRerR~e~L~~LA~~~A~rV~~tg~~v~L~pM~~~ERkIVH~~l 184 (208)
T COG1847 127 IGGKFKRVTLDVGDYRERRKETLIKLAERAAERVLETGRSVELEPMPPFERKIVHTAL 184 (208)
T ss_pred hcCcceEEEEEhhhHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCCCHHHHHHHHHHH
Confidence 3454444444 99999999988888887654 45555533 333344444443
No 54
>PF11978 MVP_shoulder: Shoulder domain; InterPro: IPR021870 This domain is found in the Major Vault Protein and has been called the shoulder domain []. This family includes two bacterial proteins A6FXE2 from SWISSPROT and A1ZGE7 from SWISSPROT. This suggests that some bacteria may possess vault particles. ; PDB: 2ZUO_G 2QZV_B 2ZV5_c 2ZV4_Y.
Probab=25.29 E-value=82 Score=18.39 Aligned_cols=22 Identities=9% Similarity=0.031 Sum_probs=18.1
Q ss_pred eHHHHHHHHHHHHHHHHHhcCC
Q 047558 98 GFGQAAFHTSLNLSSNTIFSSN 119 (120)
Q Consensus 98 d~~~~~~~~t~dvi~~~~fg~~ 119 (120)
...+.+.+-..++|-+.+||.+
T Consensus 67 ~~Fd~FHknSa~iiR~aVFg~~ 88 (118)
T PF11978_consen 67 VTFDDFHKNSARIIRQAVFGFD 88 (118)
T ss_dssp SHHHHHHHHHHHHHHHHHSTS-
T ss_pred CcHHHHcccHHHHHHHHhcCCC
Confidence 3567889999999999999975
No 55
>PHA02780 hypothetical protein; Provisional
Probab=25.16 E-value=1.1e+02 Score=15.56 Aligned_cols=35 Identities=17% Similarity=0.252 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHhCCCCCceeHHHHHHHHHHHHHHHH
Q 047558 77 RKKINDLLASVEENCPAGKAIGFGQAAFHTSLNLSSNT 114 (120)
Q Consensus 77 ~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~t~dvi~~~ 114 (120)
++++.++++-+.+ -|..+|+.+.|+..+=|+.-+.
T Consensus 34 ed~i~ellnilte---lgcdvdfde~fsdiaddilesl 68 (73)
T PHA02780 34 EDEIMELLNILTE---LGCDVDFDENFSDIADDILESL 68 (73)
T ss_pred hHHHHHHHHHHHH---hCCCcccccchhHHHHHHHHHH
Confidence 5566666766654 3677888888888888776544
Done!