Query 047561
Match_columns 352
No_of_seqs 148 out of 1240
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 21:41:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047561.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047561hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 2.6E-76 8.9E-81 561.1 24.4 326 11-340 5-348 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 1.8E-71 6E-76 519.7 25.5 287 42-333 4-305 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 6.4E-72 2.2E-76 523.1 17.4 297 43-351 2-307 (319)
4 1odm_A Isopenicillin N synthas 100.0 7.3E-68 2.5E-72 498.9 22.8 282 42-336 6-323 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 1.1E-66 3.7E-71 486.7 19.1 274 42-335 2-303 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 2.1E-62 7.1E-67 451.0 23.0 254 43-332 2-272 (280)
7 3dkq_A PKHD-type hydroxylase S 95.1 0.044 1.5E-06 48.3 6.8 77 203-299 100-194 (243)
8 2jig_A Prolyl-4 hydroxylase; h 90.3 1.1 3.6E-05 38.6 8.4 47 250-300 170-217 (224)
9 2rg4_A Uncharacterized protein 89.8 4.9 0.00017 34.3 12.2 43 248-302 166-209 (216)
10 3itq_A Prolyl 4-hydroxylase, a 87.9 1.5 5.3E-05 37.6 7.6 83 203-299 112-211 (216)
11 2hbt_A EGL nine homolog 1; pro 86.7 2 6.8E-05 37.7 7.8 80 204-299 119-212 (247)
12 2iuw_A Alkylated repair protei 83.8 4.5 0.00015 35.1 8.6 85 203-298 127-228 (238)
13 3tht_A Alkylated DNA repair pr 78.5 2.7 9.4E-05 38.7 5.5 93 203-302 199-315 (345)
14 3s57_A Alpha-ketoglutarate-dep 78.5 6 0.00021 33.4 7.3 82 203-297 101-200 (204)
15 3i3q_A Alpha-ketoglutarate-dep 68.5 10 0.00035 32.2 6.3 81 203-298 106-201 (211)
16 2dbn_A Hypothetical protein YB 53.5 6.6 0.00022 37.4 2.5 54 42-101 98-151 (461)
17 3o2g_A Gamma-butyrobetaine dio 51.3 7.8 0.00027 36.2 2.7 52 44-102 122-173 (388)
18 2opi_A L-fuculose-1-phosphate 43.9 11 0.00037 31.9 2.2 36 44-84 125-160 (212)
19 1otj_A Alpha-ketoglutarate-dep 38.0 25 0.00084 30.9 3.8 51 42-100 15-65 (283)
20 1e4c_P L-fuculose 1-phosphate 37.7 15 0.00052 31.0 2.2 36 44-84 122-157 (215)
21 2fk5_A Fuculose-1-phosphate al 36.3 20 0.00067 30.0 2.6 50 44-98 117-175 (200)
22 1pvt_A Sugar-phosphate aldolas 34.0 21 0.00073 30.6 2.6 50 43-97 160-211 (238)
23 3pvj_A Alpha-ketoglutarate-dep 31.6 34 0.0011 30.1 3.5 52 42-101 13-64 (277)
24 1oih_A Putative alkylsulfatase 31.0 37 0.0013 30.0 3.8 52 42-101 25-77 (301)
25 3ocr_A Class II aldolase/adduc 30.2 25 0.00087 31.0 2.4 37 44-84 156-192 (273)
26 2v9l_A Rhamnulose-1-phosphate 29.3 23 0.00077 31.3 1.9 49 44-97 179-229 (274)
27 4ay7_A Methylcobalamin\: coenz 29.1 85 0.0029 28.3 5.9 40 62-101 305-348 (348)
28 3r1j_A Alpha-ketoglutarate-dep 28.4 48 0.0016 29.6 4.0 52 42-101 19-71 (301)
29 3kt7_A PKHD-type hydroxylase T 27.8 71 0.0024 31.6 5.3 104 177-302 105-231 (633)
30 3rcq_A Aspartyl/asparaginyl be 27.7 89 0.003 26.0 5.3 68 219-303 113-187 (197)
31 3jsy_A Acidic ribosomal protei 27.7 1.1E+02 0.0039 25.6 6.0 41 58-98 3-44 (213)
32 2da7_A Zinc finger homeobox pr 26.5 29 0.001 23.9 1.6 41 158-198 14-54 (71)
33 1m5a_B Insulin B chain; alpha 25.7 77 0.0026 17.8 3.0 18 61-78 9-26 (30)
34 2x4k_A 4-oxalocrotonate tautom 24.3 70 0.0024 20.2 3.3 23 170-192 18-40 (63)
35 2irp_A Putative aldolase class 24.1 30 0.001 28.9 1.7 49 43-97 138-191 (208)
36 3oa3_A Aldolase; structural ge 22.9 39 0.0013 30.1 2.2 70 6-82 23-94 (288)
37 2j01_J 50S ribosomal protein L 22.4 2E+02 0.0067 23.1 6.3 40 59-98 5-46 (173)
38 1zav_A 50S ribosomal protein L 21.9 1.9E+02 0.0066 23.4 6.2 41 58-98 6-47 (180)
39 3ghf_A Septum site-determining 21.2 1.3E+02 0.0043 22.8 4.6 36 47-87 51-86 (120)
40 2qt7_A Receptor-type tyrosine- 20.5 54 0.0018 23.7 2.1 32 175-206 19-51 (91)
41 3m20_A 4-oxalocrotonate tautom 20.1 1E+02 0.0035 19.8 3.5 28 46-73 1-28 (62)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=2.6e-76 Score=561.11 Aligned_cols=326 Identities=28% Similarity=0.541 Sum_probs=283.1
Q ss_pred chhhhhhhcCCCCCCCCCCCCCCCCCCCCC----C----CCCccEEeCCCCCC-ChhHHHHHHHHHHHHHHhcCeEEEEe
Q 047561 11 STGKSAQEGALPYVPDCYVIPSSHRPNMAP----E----AAYVPIIDFGRLNE-GREQRSMVIKEIGNACSRLGFFQIVN 81 (352)
Q Consensus 11 ~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~----~----~~~iPvIDls~l~~-~~~~r~~~~~~l~~A~~~~Gff~l~n 81 (352)
+++..+++.+..+||+.|++|+++++..+. . ..+||||||+.+.. +++.|.+++++|.+||+++|||||+|
T Consensus 5 ~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~n 84 (356)
T 1gp6_A 5 ERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLIN 84 (356)
T ss_dssp CCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEES
T ss_pred ccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeC
Confidence 457888898999999999999988875332 1 34699999999873 45567889999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHhcCCCHHHHcccccCCC-CCccccccccCC-CCcchhhHHHHHhhcCCCC-CccCCCCCCCCc
Q 047561 82 HGICQSILDGALSTAFDFFKLPSEEKMKFMSGDV-HRPVRYSTSLKD-GIDEIQFWRVILKHYAHPL-DHWIDFWPKNPP 158 (352)
Q Consensus 82 hGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~-~~~~gy~~~~~~-~~e~~~~~~~~~~~~~~p~-~~~~n~wP~~~p 158 (352)
|||+.++++++++.+++||+||.|+|+++..... ....||...... ..+..+|.+.+..... |. ....|.||+.++
T Consensus 85 HGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~-p~~~~~~~~wP~~~~ 163 (356)
T 1gp6_A 85 HGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAY-PEEKRDLSIWPKTPS 163 (356)
T ss_dssp CSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEE-SGGGCCGGGSCCSST
T ss_pred CCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecC-CccccccccCCCcch
Confidence 9999999999999999999999999999987543 356788764321 2234566665443221 22 135689999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhhhhc---ccccceEeeecCCCCCCCCCCCCCCccCCCceEEEec
Q 047561 159 NYRENMGKYCTEERKLALELMSAITESLGLGPKYLVNKMD---EGMQVMAVNCYPPCPQPDISLGLPPHSDYTCLTIVLQ 235 (352)
Q Consensus 159 ~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~---~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTlL~q 235 (352)
.||+.+++|++.|.+|+.+||++|+++||+++++|.+.+. ...+.+|++|||+|+.++..+|+++|||+|+||||+|
T Consensus 164 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~q 243 (356)
T 1gp6_A 164 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH 243 (356)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEE
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEE
Confidence 9999999999999999999999999999999999999887 4667899999999998888899999999999999999
Q ss_pred CC-CcceeeeCCCCceEEcCCCCCeEEEEeCcchhhhhCCcccCccceeecCCCCceeEEEeccCCCCCC-eeecchhhc
Q 047561 236 SS-PGLEILDTEDGSWKMVPKMQSSLQVHVGDHLEVLSNGRYKSVVHRAILNRGSTRISLASLHSLGMDE-KMETAKELV 313 (352)
Q Consensus 236 ~~-~GLqv~~~~~g~W~~V~p~~g~lvVn~Gd~l~~~SnG~~~s~~HRV~~~~~~~R~Si~~F~~p~~d~-~i~p~~~~~ 313 (352)
|. +||||+ ++|+|++|+|.||++|||+||+||+||||+|+||.|||+.+++.+|||++||++|+.|+ +|.|+++++
T Consensus 244 d~v~GLQV~--~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~ 321 (356)
T 1gp6_A 244 NMVPGLQLF--YEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMV 321 (356)
T ss_dssp CSCCCEEEE--ETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGC
T ss_pred cCCCCeEEe--cCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhc
Confidence 98 999996 48999999999999999999999999999999999999998888999999999999999 999999999
Q ss_pred CCCCCCCCCCcCHHHHHH-HHHhCCcCc
Q 047561 314 DEKNPKGYKESSFRDFLN-FLSKNDLAE 340 (352)
Q Consensus 314 ~~~~~~~y~~~~~~e~~~-~~~~~~~~~ 340 (352)
++++|++|+++|++||+. ++.++ +++
T Consensus 322 ~~~~p~~y~~~t~~eyl~~~~~~~-~d~ 348 (356)
T 1gp6_A 322 SVESPAKFPPRTFAQHIEHKLFGK-EQE 348 (356)
T ss_dssp CSSSCCSSCCEEHHHHHHHHHHHH-HHH
T ss_pred CCCCCccCCCccHHHHHHHHHHhc-cCc
Confidence 999999999999999998 45555 554
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=1.8e-71 Score=519.72 Aligned_cols=287 Identities=23% Similarity=0.387 Sum_probs=247.9
Q ss_pred CCCccEEeCCCCCCChhHHHHHHHHHHHHHHhcCeEEEEeCCCChHHHHHHHHHHHHhcCCCHHHHcccccCCCCCcccc
Q 047561 42 AAYVPIIDFGRLNEGREQRSMVIKEIGNACSRLGFFQIVNHGICQSILDGALSTAFDFFKLPSEEKMKFMSGDVHRPVRY 121 (352)
Q Consensus 42 ~~~iPvIDls~l~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~gy 121 (352)
..+||||||+.+. ..+.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... ....+||
T Consensus 4 ~~~iPvIDls~~~---~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~~Gy 79 (312)
T 3oox_A 4 TSAIDPVSFSLYA---KDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-KGGARGY 79 (312)
T ss_dssp CCSSCCEETHHHH---HCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-GGGTSEE
T ss_pred CCCCCeEEChHhc---ccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-CCCcccc
Confidence 4679999999874 24677899999999999999999999999999999999999999999999999875 3356777
Q ss_pred cccc---CCCCcchhhHHHHHhhcCCCCC------ccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh
Q 047561 122 STSL---KDGIDEIQFWRVILKHYAHPLD------HWIDFWPKNPPNYRENMGKYCTEERKLALELMSAITESLGLGPKY 192 (352)
Q Consensus 122 ~~~~---~~~~e~~~~~~~~~~~~~~p~~------~~~n~wP~~~p~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~ 192 (352)
.... ..+....|+.+.+......+.. ..+|.||+.+|.||+.+++|+++|.+++.+||++|+++||+++++
T Consensus 80 ~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 159 (312)
T 3oox_A 80 IPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDF 159 (312)
T ss_dssp ECCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTT
T ss_pred ccccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHH
Confidence 5421 1122345665544332211211 236899999999999999999999999999999999999999999
Q ss_pred hhhhhcccccceEeeecCCCCCCCCCCCCCCccCCCceEEEecCC-CcceeeeCCCCceEEcCCCCCeEEEEeCcchhhh
Q 047561 193 LVNKMDEGMQVMAVNCYPPCPQPDISLGLPPHSDYTCLTIVLQSS-PGLEILDTEDGSWKMVPKMQSSLQVHVGDHLEVL 271 (352)
Q Consensus 193 ~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTlL~q~~-~GLqv~~~~~g~W~~V~p~~g~lvVn~Gd~l~~~ 271 (352)
|.+.+..+.+.+|++|||||+.++..+|+++|||+|+||||+||. +||||++ ++|+|++|+|.||++|||+||+||+|
T Consensus 160 f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~-~~g~W~~V~p~pg~~vVNiGD~l~~~ 238 (312)
T 3oox_A 160 FKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLD-RDGQWLPINPPPGCLVINIGDMLERL 238 (312)
T ss_dssp THHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEEC-TTSCEEECCCCSSCEEEEECHHHHHH
T ss_pred HHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEEC-CCCcEEECCCCCCeEEEEhHHHHHHH
Confidence 999998888889999999998865559999999999999999998 9999987 78999999999999999999999999
Q ss_pred hCCcccCccceeecCC----CCceeEEEeccCCCCCCeeecchhhcCCCCCCCCC-CcCHHHHHHHH
Q 047561 272 SNGRYKSVVHRAILNR----GSTRISLASLHSLGMDEKMETAKELVDEKNPKGYK-ESSFRDFLNFL 333 (352)
Q Consensus 272 SnG~~~s~~HRV~~~~----~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~y~-~~~~~e~~~~~ 333 (352)
|||+|+||.|||+.++ +.+|||++||++|+.|++|.|+++++++++|++|+ +++++||+..+
T Consensus 239 TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r 305 (312)
T 3oox_A 239 TNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQR 305 (312)
T ss_dssp TTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHH
T ss_pred hCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHH
Confidence 9999999999998753 45799999999999999999999999999999999 99999999833
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=6.4e-72 Score=523.14 Aligned_cols=297 Identities=31% Similarity=0.544 Sum_probs=251.9
Q ss_pred CCccEEeCCCCCCChhHHHHHHHHHHHHHHhcCeEEEEeCCCChHHHHHHHHHHHHhcCCCHHHHcccccCCCCCccccc
Q 047561 43 AYVPIIDFGRLNEGREQRSMVIKEIGNACSRLGFFQIVNHGICQSILDGALSTAFDFFKLPSEEKMKFMSGDVHRPVRYS 122 (352)
Q Consensus 43 ~~iPvIDls~l~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~gy~ 122 (352)
.+||||||+.+. +..+.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... ..||.
T Consensus 2 ~~iPvIDls~l~--~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~----~~Gy~ 75 (319)
T 1w9y_A 2 ENFPIISLDKVN--GVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA----SKALE 75 (319)
T ss_dssp CCCCEEEGGGGG--STTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHT
T ss_pred CCCCEEECcccC--cccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC----CCCCC
Confidence 469999999985 345678999999999999999999999999999999999999999999999998643 23665
Q ss_pred cccCCCCcchhhHHHHHhhcCCCCCccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhhhhcc---
Q 047561 123 TSLKDGIDEIQFWRVILKHYAHPLDHWIDFWPKNPPNYRENMGKYCTEERKLALELMSAITESLGLGPKYLVNKMDE--- 199 (352)
Q Consensus 123 ~~~~~~~e~~~~~~~~~~~~~~p~~~~~n~wP~~~p~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~--- 199 (352)
... ...+..+|.+.+.... .|. ...|.||+.++.||+.+++|++.|.+++.+||++|+++||+++++|.+.+..
T Consensus 76 ~~~-~e~~~~d~ke~~~~~~-~p~-~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~ 152 (319)
T 1w9y_A 76 GVQ-AEVTDMDWESTFFLKH-LPI-SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKG 152 (319)
T ss_dssp TCC-CCGGGCCCCEEEEEEE-ESC-CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTC
T ss_pred ccc-ccCCCCChhhheeeec-CCc-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCC
Confidence 421 1123455555443322 222 3468999999999999999999999999999999999999999999998863
Q ss_pred cccceEeeecCCCCCCCCCCCCCCccCCCceEEEecC-C-CcceeeeCCCCceEEcCCCCCeEEEEeCcchhhhhCCccc
Q 047561 200 GMQVMAVNCYPPCPQPDISLGLPPHSDYTCLTIVLQS-S-PGLEILDTEDGSWKMVPKMQSSLQVHVGDHLEVLSNGRYK 277 (352)
Q Consensus 200 ~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTlL~q~-~-~GLqv~~~~~g~W~~V~p~~g~lvVn~Gd~l~~~SnG~~~ 277 (352)
..+.+|++|||||++++..+|+++|||+|+||||+|| . +||||+ ++|+|++|+|.||++|||+||+||+||||+|+
T Consensus 153 ~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~--~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~k 230 (319)
T 1w9y_A 153 PNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL--KDGQWIDVPPMRHSIVVNLGDQLEVITNGKYK 230 (319)
T ss_dssp CEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEE--ETTEEEECCCCTTCEEEEECHHHHHHTTTSSC
T ss_pred ccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEe--eCCeEEEcccCCCcEEEEhHHHHHHHhCCeee
Confidence 4467999999999988888999999999999999995 5 999994 58999999999999999999999999999999
Q ss_pred CccceeecCCCCceeEEEeccCCCCCCeeecchhhcCCC---CCCCCCCcCHHHHHHHHHhCCcCccccc-ccccccC
Q 047561 278 SVVHRAILNRGSTRISLASLHSLGMDEKMETAKELVDEK---NPKGYKESSFRDFLNFLSKNDLAEGKSF-IDTLKIK 351 (352)
Q Consensus 278 s~~HRV~~~~~~~R~Si~~F~~p~~d~~i~p~~~~~~~~---~~~~y~~~~~~e~~~~~~~~~~~~~~~~-~~~~~~~ 351 (352)
|+.|||+.+++++|||++||++|+.|++|.|++++++++ +|++|++++++||+..+.+.++.+ +.. ++.+||.
T Consensus 231 S~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~-~~~~~~~~~~~ 307 (319)
T 1w9y_A 231 SVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQA-KEPRFEAMKAM 307 (319)
T ss_dssp CCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSS-HHHHHHHHHHC
T ss_pred cccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCc-chhHHHHHHHH
Confidence 999999998888999999999999999999999999887 599999999999999555554766 544 6777764
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=7.3e-68 Score=498.91 Aligned_cols=282 Identities=21% Similarity=0.316 Sum_probs=243.2
Q ss_pred CCCccEEeCCCCC-CChhHHHHHHHHHHHHHHhcCeEEEEeCCCChHHHHHHHHHHHHh-cCCCHHHHcccccCCCCCcc
Q 047561 42 AAYVPIIDFGRLN-EGREQRSMVIKEIGNACSRLGFFQIVNHGICQSILDGALSTAFDF-FKLPSEEKMKFMSGDVHRPV 119 (352)
Q Consensus 42 ~~~iPvIDls~l~-~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~~~~~~ 119 (352)
..+||||||+.+. .+++.+.+++++|.+||+++|||||+|||| +++++++.+++| |+||.|+|+++.. +
T Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~------~ 76 (331)
T 1odm_A 6 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI------R 76 (331)
T ss_dssp BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC------T
T ss_pred CCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh------c
Confidence 4579999999986 345678889999999999999999999999 899999999999 9999999999876 2
Q ss_pred cccccc---CCC------CcchhhHHHHHhhcCCCC----------CccCCCCCCC--CchhHHHHHHHHHHHHHHHHHH
Q 047561 120 RYSTSL---KDG------IDEIQFWRVILKHYAHPL----------DHWIDFWPKN--PPNYRENMGKYCTEERKLALEL 178 (352)
Q Consensus 120 gy~~~~---~~~------~e~~~~~~~~~~~~~~p~----------~~~~n~wP~~--~p~fr~~~~~y~~~~~~la~~l 178 (352)
||.... ... ....||.+.+......+. ...+|.||+. +|+||+.+++|++.|.+++..|
T Consensus 77 Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~l 156 (331)
T 1odm_A 77 AYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSAL 156 (331)
T ss_dssp TTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 443211 111 124466655444322111 1247899998 9999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhcccccceE--eeecC------C---CCCCCC-CCCCCCccCCCceEEEecCC-CcceeeeC
Q 047561 179 MSAITESLGLGPKYLVNKMDEGMQVMA--VNCYP------P---CPQPDI-SLGLPPHSDYTCLTIVLQSS-PGLEILDT 245 (352)
Q Consensus 179 l~~la~~Lgl~~~~~~~~~~~~~~~lr--l~~Yp------~---~~~~~~-~~~~~~HtD~~~lTlL~q~~-~GLqv~~~ 245 (352)
+++|+++||+++++|.+.+..+.+.+| ++||| | |++++. .+|+++|||+|+||||+||. +||||++
T Consensus 157 l~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~- 235 (331)
T 1odm_A 157 LKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVET- 235 (331)
T ss_dssp HHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEE-
T ss_pred HHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEEc-
Confidence 999999999999999999888788899 99999 7 777665 89999999999999999998 9999987
Q ss_pred CCCceEEcCCCCCeEEEEeCcchhhhhCCcccCccceeecCCCCceeEEEeccCCCCCCeeecchhhcCCCCCCCCCCcC
Q 047561 246 EDGSWKMVPKMQSSLQVHVGDHLEVLSNGRYKSVVHRAILNRGSTRISLASLHSLGMDEKMETAKELVDEKNPKGYKESS 325 (352)
Q Consensus 246 ~~g~W~~V~p~~g~lvVn~Gd~l~~~SnG~~~s~~HRV~~~~~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~y~~~~ 325 (352)
++| |++|+|.||++|||+||+||+||||+|+||.|||+. ++.+|||++||++|+.|++|.|+++++++++ ++|++++
T Consensus 236 ~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t 312 (331)
T 1odm_A 236 AAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLS 312 (331)
T ss_dssp TTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCB
T ss_pred CCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCcc
Confidence 788 999999999999999999999999999999999986 4789999999999999999999999998877 8899999
Q ss_pred HHHHHHHHHhC
Q 047561 326 FRDFLNFLSKN 336 (352)
Q Consensus 326 ~~e~~~~~~~~ 336 (352)
++||+..+.++
T Consensus 313 ~~e~l~~~~~~ 323 (331)
T 1odm_A 313 YGDYLQNGLVS 323 (331)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999955444
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.1e-66 Score=486.67 Aligned_cols=274 Identities=16% Similarity=0.245 Sum_probs=228.0
Q ss_pred CCCccEEeCCCCCCChhHHHHHHHHHHHHHHhcCeEEEEeCCCChHHHHHHHHHHHHhcCCC-HHHHcccccCCCCCccc
Q 047561 42 AAYVPIIDFGRLNEGREQRSMVIKEIGNACSRLGFFQIVNHGICQSILDGALSTAFDFFKLP-SEEKMKFMSGDVHRPVR 120 (352)
Q Consensus 42 ~~~iPvIDls~l~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~~~~~~~g 120 (352)
..+||||||+.+..++. .++|.+||+++|||||+||||+.++++++++.+++||+|| .|+|+++........+|
T Consensus 2 ~~~iPvIDls~l~~~~~-----~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~G 76 (311)
T 1dcs_A 2 DTTVPTFSLAELQQGLH-----QDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRG 76 (311)
T ss_dssp CCCCCEEEHHHHHTTCS-----HHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSE
T ss_pred CCCCcEEEchhhcCCCH-----HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCc
Confidence 35799999998753221 1389999999999999999999999999999999999999 99999998765556788
Q ss_pred cccccCC-------CCcchhhHHHHHhhcCCCCCccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC----C
Q 047561 121 YSTSLKD-------GIDEIQFWRVILKHYAHPLDHWIDFWPKNPPNYRENMGKYCTEERKLALELMSAITESLGL----G 189 (352)
Q Consensus 121 y~~~~~~-------~~e~~~~~~~~~~~~~~p~~~~~n~wP~~~p~fr~~~~~y~~~~~~la~~ll~~la~~Lgl----~ 189 (352)
|...... ..+..||.+.+.... .+|.|| ++.|++.+++|++.|.+|+.+|+++|+++||+ +
T Consensus 77 y~~~~~e~~~~~~~~~~~~d~~E~~~~~~------~~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~ 148 (311)
T 1dcs_A 77 FTGLESESTAQITNTGSYSDYSMCYSMGT------ADNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGG 148 (311)
T ss_dssp EEEC-----------------CEEEEECS------SSCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTC
T ss_pred eeeccccccccccCCCCCCCcceeeeccC------CCCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCc
Confidence 8763221 123455555443321 158899 89999999999999999999999999999999 8
Q ss_pred hhhhhhhhcccccceEeeecCCCCCCC--C--CCCCCCccCCCceEEEecC-C-Cc---ceeeeCCCCceEEcCCCCCeE
Q 047561 190 PKYLVNKMDEGMQVMAVNCYPPCPQPD--I--SLGLPPHSDYTCLTIVLQS-S-PG---LEILDTEDGSWKMVPKMQSSL 260 (352)
Q Consensus 190 ~~~~~~~~~~~~~~lrl~~Yp~~~~~~--~--~~~~~~HtD~~~lTlL~q~-~-~G---Lqv~~~~~g~W~~V~p~~g~l 260 (352)
+++|.+. .+.+|++|||||+.++ + .+|+++|||+|+||||+|| . +| |||++ +|+|++|+|.||++
T Consensus 149 ~~~f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~--~g~W~~V~p~pg~l 222 (311)
T 1dcs_A 149 VEAFLDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEV--GGAFTDLPYRPDAV 222 (311)
T ss_dssp HHHHHSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEE--TTEEEECCCCTTCE
T ss_pred HhHHhhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEe--CCEEEeCcCCCCeE
Confidence 8888765 5679999999998763 3 6789999999999999998 6 99 99976 89999999999999
Q ss_pred EEEeCcchhhhhCCcccCccceeecCC-----CCceeEEEeccCCCCCCeeecchhhcCCCCCCCC--CCcCHHHHHHHH
Q 047561 261 QVHVGDHLEVLSNGRYKSVVHRAILNR-----GSTRISLASLHSLGMDEKMETAKELVDEKNPKGY--KESSFRDFLNFL 333 (352)
Q Consensus 261 vVn~Gd~l~~~SnG~~~s~~HRV~~~~-----~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~y--~~~~~~e~~~~~ 333 (352)
|||+||+||+||||+|+||.|||+.++ +.+|||++||++|+.|++|. +++++++++|++| +++|++||+..+
T Consensus 223 vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~ 301 (311)
T 1dcs_A 223 LVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGN 301 (311)
T ss_dssp EEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSS
T ss_pred EEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHH
Confidence 999999999999999999999999987 67899999999999999999 9999998899999 999999999844
Q ss_pred Hh
Q 047561 334 SK 335 (352)
Q Consensus 334 ~~ 335 (352)
.+
T Consensus 302 ~~ 303 (311)
T 1dcs_A 302 YV 303 (311)
T ss_dssp CC
T ss_pred HH
Confidence 33
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=2.1e-62 Score=451.00 Aligned_cols=254 Identities=22% Similarity=0.326 Sum_probs=211.4
Q ss_pred CCccEEeCCCCCCChhHHHHHHHHHHHHHHhcCeEEEEeCCCChHHHHHHHHHHHHhcCCCHHHHcccccCCCCCccccc
Q 047561 43 AYVPIIDFGRLNEGREQRSMVIKEIGNACSRLGFFQIVNHGICQSILDGALSTAFDFFKLPSEEKMKFMSGDVHRPVRYS 122 (352)
Q Consensus 43 ~~iPvIDls~l~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~gy~ 122 (352)
.+||||||+... .+++|.+||+++|||||+||||+.++++++++.+++||++ |+|+++.... ....||.
T Consensus 2 ~~IPvIDls~~~--------~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~-~~~~GY~ 70 (280)
T 3on7_A 2 MKLETIDYRAAD--------SAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNR-ETHDGFF 70 (280)
T ss_dssp --CCEEETTSTT--------HHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCT-TTCCEEE
T ss_pred CCCCEEECCChh--------HHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCC-CCCCccc
Confidence 369999999753 4689999999999999999999999999999999999997 7899987643 3567886
Q ss_pred ccc-CC---CCcchhhHHHHHhhcCCCCCccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh--hh---h
Q 047561 123 TSL-KD---GIDEIQFWRVILKHYAHPLDHWIDFWPKNPPNYRENMGKYCTEERKLALELMSAITESLGLGP--KY---L 193 (352)
Q Consensus 123 ~~~-~~---~~e~~~~~~~~~~~~~~p~~~~~n~wP~~~p~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~--~~---~ 193 (352)
... .. +....||.+.+. ...||..++.||+.+++|+++|.+++.+||++|+++||++. ++ |
T Consensus 71 ~~~~~e~~~~~~~~D~kE~~~----------~~p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~ 140 (280)
T 3on7_A 71 PASISETAKGHTVKDIKEYYH----------VYPWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPL 140 (280)
T ss_dssp CCC--------CCCCSCEEEE----------ECTTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCH
T ss_pred cCccccccCCCCcccHHHHHh----------cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHH
Confidence 532 11 111233333221 12477788999999999999999999999999999999763 22 4
Q ss_pred hhhhcccc-cceEeeecCCCCCCC--CCCCCCCccCCCceEEEecCC-CcceeeeCCCCceEEcCCCCCeEEEEeCcchh
Q 047561 194 VNKMDEGM-QVMAVNCYPPCPQPD--ISLGLPPHSDYTCLTIVLQSS-PGLEILDTEDGSWKMVPKMQSSLQVHVGDHLE 269 (352)
Q Consensus 194 ~~~~~~~~-~~lrl~~Yp~~~~~~--~~~~~~~HtD~~~lTlL~q~~-~GLqv~~~~~g~W~~V~p~~g~lvVn~Gd~l~ 269 (352)
.+.+..+. +.+|++|||||+.++ ..+|+++|||+|+||||+||. +||||++ ++|+|++|+|.||++|||+||+||
T Consensus 141 ~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~-~~g~W~~V~p~pg~~vVNiGD~l~ 219 (280)
T 3on7_A 141 PEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKA-KDGSWLDVPSDFGNIIINIGDMLQ 219 (280)
T ss_dssp HHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEEC-TTSCEEECCCCTTCEEEEECHHHH
T ss_pred HHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEc-CCCCEEECcCCCCEEEEEcChHHH
Confidence 55555444 789999999998764 478999999999999999998 9999987 789999999999999999999999
Q ss_pred hhhCCcccCccceeecCC----CCceeEEEeccCCCCCCeeecchhhcCCCCCCCCCCcCHHHHHHH
Q 047561 270 VLSNGRYKSVVHRAILNR----GSTRISLASLHSLGMDEKMETAKELVDEKNPKGYKESSFRDFLNF 332 (352)
Q Consensus 270 ~~SnG~~~s~~HRV~~~~----~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~y~~~~~~e~~~~ 332 (352)
+||||+|+||.|||+.++ ..+|||++||++|+.|++|.| ++|++||+.-
T Consensus 220 ~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~ 272 (280)
T 3on7_A 220 EASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLME 272 (280)
T ss_dssp HHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHH
T ss_pred HHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHH
Confidence 999999999999999864 358999999999999999874 5999999983
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.06 E-value=0.044 Score=48.28 Aligned_cols=77 Identities=18% Similarity=0.064 Sum_probs=52.1
Q ss_pred ceEeeecCCCCCCCCCCCCCCccCCC-----------ceEEEe--cC--C---CcceeeeCCCCceEEcCCCCCeEEEEe
Q 047561 203 VMAVNCYPPCPQPDISLGLPPHSDYT-----------CLTIVL--QS--S---PGLEILDTEDGSWKMVPKMQSSLQVHV 264 (352)
Q Consensus 203 ~lrl~~Yp~~~~~~~~~~~~~HtD~~-----------~lTlL~--q~--~---~GLqv~~~~~g~W~~V~p~~g~lvVn~ 264 (352)
-+++++|.+- -...+|.|.. .+|+++ .+ . |.|.+.+ .. .=..|+|..|.+|+.-
T Consensus 100 ~~~~~rY~~G------~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~-~~-~~~~V~P~~G~~v~F~ 171 (243)
T 3dkq_A 100 PPLFNRYQGG------ETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQD-TY-GQQSIKLSAGSLVLYP 171 (243)
T ss_dssp EEEEEEECTT------CEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEE-TT-EEEEECCCTTCEEEEE
T ss_pred cceEEEECCC------CeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEee-CC-CcEEEecCCCEEEEEC
Confidence 4889999652 2245676653 455554 34 2 5577754 22 3467999999999875
Q ss_pred CcchhhhhCCcccCccceeecCCCCceeEEEeccC
Q 047561 265 GDHLEVLSNGRYKSVVHRAILNRGSTRISLASLHS 299 (352)
Q Consensus 265 Gd~l~~~SnG~~~s~~HRV~~~~~~~R~Si~~F~~ 299 (352)
. .++|+|.......|++++.+++
T Consensus 172 s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 172 S------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp T------------TSEEEECCEEEECEEEEEEEEE
T ss_pred C------------CCeEcCccccccCEEEEEEehh
Confidence 3 3699988655569999999876
No 8
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=90.29 E-value=1.1 Score=38.61 Aligned_cols=47 Identities=9% Similarity=0.063 Sum_probs=33.9
Q ss_pred eEEcCCCCCeEEEEeCcchhhhhCCcc-cCccceeecCCCCceeEEEeccCC
Q 047561 250 WKMVPKMQSSLQVHVGDHLEVLSNGRY-KSVVHRAILNRGSTRISLASLHSL 300 (352)
Q Consensus 250 W~~V~p~~g~lvVn~Gd~l~~~SnG~~-~s~~HRV~~~~~~~R~Si~~F~~p 300 (352)
-+.|.|..|.+|+.-- ...+|.. ..++|+|.......|+++..+++-
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHV 217 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEc
Confidence 4789999999888754 1234433 578999876545689999988754
No 9
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=89.78 E-value=4.9 Score=34.29 Aligned_cols=43 Identities=16% Similarity=0.166 Sum_probs=33.4
Q ss_pred CceEEcCCCCCeEEEEeCcchhhhhCCcccCccceeecCCC-CceeEEEeccCCCC
Q 047561 248 GSWKMVPKMQSSLQVHVGDHLEVLSNGRYKSVVHRAILNRG-STRISLASLHSLGM 302 (352)
Q Consensus 248 g~W~~V~p~~g~lvVn~Gd~l~~~SnG~~~s~~HRV~~~~~-~~R~Si~~F~~p~~ 302 (352)
..+..|.|.+|.+||.-+. ..|.|..... ++|+||+|-+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 4567899999999999774 2799987644 58999999887654
No 10
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=87.91 E-value=1.5 Score=37.56 Aligned_cols=83 Identities=10% Similarity=-0.046 Sum_probs=52.6
Q ss_pred ceEeeecCCCCCCCCCCCCCCccCCC-----------ceEEEec--CC---CcceeeeCCCCceEEcCCCCCeEEEEeCc
Q 047561 203 VMAVNCYPPCPQPDISLGLPPHSDYT-----------CLTIVLQ--SS---PGLEILDTEDGSWKMVPKMQSSLQVHVGD 266 (352)
Q Consensus 203 ~lrl~~Yp~~~~~~~~~~~~~HtD~~-----------~lTlL~q--~~---~GLqv~~~~~g~W~~V~p~~g~lvVn~Gd 266 (352)
-+++++|.+.. ...+|.|+. .+|+++. |. |++.+ +..+ +.|.|..|.+++.-.-
T Consensus 112 ~lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~F--p~~~--~~V~P~~G~al~f~~~ 181 (216)
T 3itq_A 112 GLHILNYEVDQ------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFF--PKLN--LSVHPRKGMAVYFEYF 181 (216)
T ss_dssp CCEEEEECBTC------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEE--TTTT--EEECCCTTCEEEEECC
T ss_pred ceeEEEeCCCC------ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEe--cCCC--CEEecCCCeEEEEecc
Confidence 37888886522 134566653 4777764 33 44555 3322 7889999998886641
Q ss_pred chhhhhCCc-ccCccceeecCCCCceeEEEeccC
Q 047561 267 HLEVLSNGR-YKSVVHRAILNRGSTRISLASLHS 299 (352)
Q Consensus 267 ~l~~~SnG~-~~s~~HRV~~~~~~~R~Si~~F~~ 299 (352)
..+|. -..++|+|.......|+++..+++
T Consensus 182 ----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 182 ----YQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp ----CSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred ----CCCCCCCCccccccceeccccEEEEEeeEe
Confidence 12332 246799987654568999988765
No 11
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=86.72 E-value=2 Score=37.67 Aligned_cols=80 Identities=20% Similarity=0.246 Sum_probs=53.3
Q ss_pred eEeeecCCCCCCCCCCCCCCccCCC-----ceEEEec--C-----C--CcceeeeCCCCceEEcCCCCCeEEEEeCcchh
Q 047561 204 MAVNCYPPCPQPDISLGLPPHSDYT-----CLTIVLQ--S-----S--PGLEILDTEDGSWKMVPKMQSSLQVHVGDHLE 269 (352)
Q Consensus 204 lrl~~Yp~~~~~~~~~~~~~HtD~~-----~lTlL~q--~-----~--~GLqv~~~~~g~W~~V~p~~g~lvVn~Gd~l~ 269 (352)
+.+.+|++. .-....|.|.. .+|+++. + . |-|.+++..++....|.|..|.+|++-.+.
T Consensus 119 ~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~-- 191 (247)
T 2hbt_A 119 AMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR-- 191 (247)
T ss_dssp EEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST--
T ss_pred EEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC--
Confidence 678889751 12244566662 5777763 2 2 447775412236789999999999987531
Q ss_pred hhhCCcccCccceeecCCCCceeEEEeccC
Q 047561 270 VLSNGRYKSVVHRAILNRGSTRISLASLHS 299 (352)
Q Consensus 270 ~~SnG~~~s~~HRV~~~~~~~R~Si~~F~~ 299 (352)
-.+|.|.. ..+.|+||+.++.
T Consensus 192 --------~~~H~V~p-~~~~R~sit~W~~ 212 (247)
T 2hbt_A 192 --------RNPHEVQP-AYATRYAITVWYF 212 (247)
T ss_dssp --------TCCEEECC-BSSCEEEEEEEEE
T ss_pred --------Cceeeecc-CCCEEEEEEEEEc
Confidence 15899876 4579999998664
No 12
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=83.78 E-value=4.5 Score=35.14 Aligned_cols=85 Identities=14% Similarity=0.105 Sum_probs=53.1
Q ss_pred ceEeeecCCCCCCCCCCCCCCccCCC--------ceEEEecCCCcceeeeCCC---------CceEEcCCCCCeEEEEeC
Q 047561 203 VMAVNCYPPCPQPDISLGLPPHSDYT--------CLTIVLQSSPGLEILDTED---------GSWKMVPKMQSSLQVHVG 265 (352)
Q Consensus 203 ~lrl~~Yp~~~~~~~~~~~~~HtD~~--------~lTlL~q~~~GLqv~~~~~---------g~W~~V~p~~g~lvVn~G 265 (352)
.+-+|+|.+- .-++++|.|-. +.+|-+-...-+.+..... +..+.+...+|+++|+-|
T Consensus 127 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~G 201 (238)
T 2iuw_A 127 SLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIMEG 201 (238)
T ss_dssp EEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEESCEEEEEEECCC--------CCCEEEEEECTTCEEEEEE
T ss_pred EEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECCCCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEECh
Confidence 4678999652 23677888842 2333332223344433111 468899999999999999
Q ss_pred cchhhhhCCcccCccceeecCCCCceeEEEecc
Q 047561 266 DHLEVLSNGRYKSVVHRAILNRGSTRISLASLH 298 (352)
Q Consensus 266 d~l~~~SnG~~~s~~HRV~~~~~~~R~Si~~F~ 298 (352)
++=..|.-|.-+.. .....|+|+.|=.
T Consensus 202 ~~r~~w~H~I~~~~------~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 202 ATQADWQHRVPKEY------HSREPRVNLTFRT 228 (238)
T ss_dssp THHHHEEEEECCCS------SCCCCEEEEEEEC
T ss_pred hhhCccEecCCCcC------CCCCCEEEEEeee
Confidence 98777764433211 1246899999964
No 13
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=78.47 E-value=2.7 Score=38.72 Aligned_cols=93 Identities=22% Similarity=0.223 Sum_probs=61.6
Q ss_pred ceEeeecCCCCCCCCCCCCCCccCCC------ceEEEecCCCcceeeeCCCCceEEcCCCCCeEEEEeCcchhhhhCCcc
Q 047561 203 VMAVNCYPPCPQPDISLGLPPHSDYT------CLTIVLQSSPGLEILDTEDGSWKMVPKMQSSLQVHVGDHLEVLSNGRY 276 (352)
Q Consensus 203 ~lrl~~Yp~~~~~~~~~~~~~HtD~~------~lTlL~q~~~GLqv~~~~~g~W~~V~p~~g~lvVn~Gd~l~~~SnG~~ 276 (352)
.+-+|+|.+- -++++|.|.. ..|+-+-...-+.+.. .++.++.+...+|+++|+-|++=..|.-|.-
T Consensus 199 ~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSLG~~~~f~f~~-~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~ 271 (345)
T 3tht_A 199 QMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSLGSEIVMDFKH-PDGIAVPVMLPRRSLLVMTGESRYLWTHGIT 271 (345)
T ss_dssp EEEEEEECTT------CCEEEECCCTTTBCSCEEEEEESSCEEEEEEC-TTSCEEEEEECTTEEEEECTHHHHTSEEEEC
T ss_pred EEEEEEecCC------CCEeeccCCchhcCCeEEEEECCCceeEEEcc-CCCceEEEEcCCCcEEEEChHHhhceEccCC
Confidence 4678899651 2688888874 3333333334566654 5677999999999999999999888876655
Q ss_pred cCccceeec------------------CCCCceeEEEeccCCCC
Q 047561 277 KSVVHRAIL------------------NRGSTRISLASLHSLGM 302 (352)
Q Consensus 277 ~s~~HRV~~------------------~~~~~R~Si~~F~~p~~ 302 (352)
+-...-+-. .+...|+|+.|=.-+..
T Consensus 272 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 272 CRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp CCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred cccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 543332210 11346999999765543
No 14
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=78.46 E-value=6 Score=33.43 Aligned_cols=82 Identities=15% Similarity=0.092 Sum_probs=51.3
Q ss_pred ceEeeecCCCCCCCCCCCCCCccCCC--------ceEEEecCCCcceeeeC--------CCCceEEcCCCCCeEEEEeCc
Q 047561 203 VMAVNCYPPCPQPDISLGLPPHSDYT--------CLTIVLQSSPGLEILDT--------EDGSWKMVPKMQSSLQVHVGD 266 (352)
Q Consensus 203 ~lrl~~Yp~~~~~~~~~~~~~HtD~~--------~lTlL~q~~~GLqv~~~--------~~g~W~~V~p~~g~lvVn~Gd 266 (352)
.+-+|+|.+. .-+++.|.|-. ..+|-+-...-+.+... +.+..+.+...+|+++|.-|+
T Consensus 101 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IasvSLG~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~ 175 (204)
T 3s57_A 101 FVLINRYKDG-----SDHICEHRDDERELAPGSPIASVSFGASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHP 175 (204)
T ss_dssp EEEEEEESST-----TCCEEEECCCCTTBCTTCCEEEEEEESCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETT
T ss_pred eeEEEEECCC-----CCcccceecChhhccCCCcEEEEECCCceEEEEEEcCCCccccccCCceEEEECCCCCEEEECch
Confidence 3568899652 23577788762 22333322233444321 123578888999999999998
Q ss_pred chhhhhCCcccCccceeecCC--CCceeEEEec
Q 047561 267 HLEVLSNGRYKSVVHRAILNR--GSTRISLASL 297 (352)
Q Consensus 267 ~l~~~SnG~~~s~~HRV~~~~--~~~R~Si~~F 297 (352)
+=..|. |.|-... ...|+|+.|-
T Consensus 176 ~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 176 TNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp HHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred hhheeE--------eeccccCCCCCCEEEEEee
Confidence 877776 5554322 3589999884
No 15
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=68.46 E-value=10 Score=32.22 Aligned_cols=81 Identities=16% Similarity=0.173 Sum_probs=51.6
Q ss_pred ceEeeecCCCCCCCCCCCCCCccCC-----C--ceEEEecCCCcceeeeC-CCCceEEcCCCCCeEEEEeCcchhhhhCC
Q 047561 203 VMAVNCYPPCPQPDISLGLPPHSDY-----T--CLTIVLQSSPGLEILDT-EDGSWKMVPKMQSSLQVHVGDHLEVLSNG 274 (352)
Q Consensus 203 ~lrl~~Yp~~~~~~~~~~~~~HtD~-----~--~lTlL~q~~~GLqv~~~-~~g~W~~V~p~~g~lvVn~Gd~l~~~SnG 274 (352)
..-+|+|.+ +. +++.|.|- + ++++-+-...-+.+... +.+..+.+...+|+++|.-|++- .|
T Consensus 106 ~~LvN~Y~~-----G~-~i~~H~D~~e~~~~~pI~svSLG~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~--- 175 (211)
T 3i3q_A 106 ACLINRYAP-----GA-KLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF--- 175 (211)
T ss_dssp EEEEEEECT-----TC-CEEEECCCCCSCTTSCEEEEEEESCEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC---
T ss_pred EEEEEEEcC-----CC-CcccccCCCccccCCCEEEEECCCCeEEEEecccCCCceEEEECCCCCEEEECchHH-ce---
Confidence 367888965 23 78888882 2 33444433344555321 23568889999999999988762 23
Q ss_pred cccCccceeecCCC-------CceeEEEecc
Q 047561 275 RYKSVVHRAILNRG-------STRISLASLH 298 (352)
Q Consensus 275 ~~~s~~HRV~~~~~-------~~R~Si~~F~ 298 (352)
.|.|..... ..|+|+.|-.
T Consensus 176 -----~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 -----YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp -----CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred -----EeccCcccCCcCCCCCCCEEEEEeee
Confidence 477654321 3699999863
No 16
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=53.50 E-value=6.6 Score=37.38 Aligned_cols=54 Identities=20% Similarity=0.318 Sum_probs=38.9
Q ss_pred CCCccEEeCCCCCCChhHHHHHHHHHHHHHHhcCeEEEEeCCCChHHHHHHHHHHHHhcC
Q 047561 42 AAYVPIIDFGRLNEGREQRSMVIKEIGNACSRLGFFQIVNHGICQSILDGALSTAFDFFK 101 (352)
Q Consensus 42 ~~~iPvIDls~l~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~ 101 (352)
+.-||.|||+++.++. +.++..+.+++.|++.|.|. ||.+......+.+.+|.+
T Consensus 98 ~~~iP~i~f~di~~~~-----~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 98 DAVWPVLSYADIKAGH-----VTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CCSSCEEEHHHHHHTC-----CCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHhcCCC-----CCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 4569999999874211 11345566679999999887 898888877777777763
No 17
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=51.33 E-value=7.8 Score=36.19 Aligned_cols=52 Identities=10% Similarity=0.030 Sum_probs=38.4
Q ss_pred CccEEeCCCCCCChhHHHHHHHHHHHHHHhcCeEEEEeCCCChHHHHHHHHHHHHhcCC
Q 047561 44 YVPIIDFGRLNEGREQRSMVIKEIGNACSRLGFFQIVNHGICQSILDGALSTAFDFFKL 102 (352)
Q Consensus 44 ~iPvIDls~l~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~l 102 (352)
++|.|||+.+..+ .+.+.++.+++.++|++.+.+-.++.+.. .+.++.|=.+
T Consensus 122 ~~~~~~~~~~l~~----d~~~~~~~~~l~~~Gvv~frg~~~~~~~~---~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRY----DEHAYKWLSTLKKVGIVRLTGASDKPGEV---SKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHC----HHHHHHHHHHHHHHSEEEEECCCSSTTHH---HHHHHHHSCC
T ss_pred CCCccCHHHHhcC----HHHHHHHHHHHHhcCEEEEeCCCCCHHHH---HHHHHHhCCC
Confidence 6899999987532 23567899999999999999988876543 3455666443
No 18
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=43.94 E-value=11 Score=31.94 Aligned_cols=36 Identities=22% Similarity=0.331 Sum_probs=28.6
Q ss_pred CccEEeCCCCCCChhHHHHHHHHHHHHHHhcCeEEEEeCCC
Q 047561 44 YVPIIDFGRLNEGREQRSMVIKEIGNACSRLGFFQIVNHGI 84 (352)
Q Consensus 44 ~iPvIDls~l~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi 84 (352)
.||++++.... + .++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g-~----~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPG-S----PELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTT-C----HHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCC-c----HHHHHHHHHHhccCCEEEEcCCCc
Confidence 69999987653 1 246788888988888999999996
No 19
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=37.95 E-value=25 Score=30.86 Aligned_cols=51 Identities=16% Similarity=0.075 Sum_probs=35.9
Q ss_pred CCCccEEeCCCCCCChhHHHHHHHHHHHHHHhcCeEEEEeCCCChHHHHHHHHHHHHhc
Q 047561 42 AAYVPIIDFGRLNEGREQRSMVIKEIGNACSRLGFFQIVNHGICQSILDGALSTAFDFF 100 (352)
Q Consensus 42 ~~~iPvIDls~l~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF 100 (352)
-++|+-|||++.. +++ ..++|.+++.++|++.+.+-.++.+.. .+.++.|=
T Consensus 15 Gaei~gvdl~~~l-~~~----~~~~l~~~l~~~Gvv~frg~~~~~~~~---~~~~~~~G 65 (283)
T 1otj_A 15 GAQISGADLTRPL-SDN----QFEQLYHAVLRHQVVFLRDQAITPQQQ---RALAQRFG 65 (283)
T ss_dssp CEEEESCCSSSCC-CHH----HHHHHHHHHHHHSEEEECSCCCCHHHH---HHHHHTTS
T ss_pred eEEEECCCcCccC-CHH----HHHHHHHHHHHCCEEEECCCCCCHHHH---HHHHHHhC
Confidence 3467778998853 222 457899999999999999988776533 34555553
No 20
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=37.70 E-value=15 Score=31.04 Aligned_cols=36 Identities=11% Similarity=0.220 Sum_probs=28.4
Q ss_pred CccEEeCCCCCCChhHHHHHHHHHHHHHHhcCeEEEEeCCC
Q 047561 44 YVPIIDFGRLNEGREQRSMVIKEIGNACSRLGFFQIVNHGI 84 (352)
Q Consensus 44 ~iPvIDls~l~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi 84 (352)
.||++++.... . .++++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~g--~---~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFG--T---RELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTT--C---HHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCC--c---HHHHHHHHHHhccCCEEEEcCCCc
Confidence 68999987653 1 246778888998888899999996
No 21
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=36.34 E-value=20 Score=30.04 Aligned_cols=50 Identities=14% Similarity=0.040 Sum_probs=34.4
Q ss_pred CccEE-eCCCCCCChhHHHHHHHHHHHHHHhcCeEEEEeCCCC--h------HHHHHHHHHHHH
Q 047561 44 YVPII-DFGRLNEGREQRSMVIKEIGNACSRLGFFQIVNHGIC--Q------SILDGALSTAFD 98 (352)
Q Consensus 44 ~iPvI-Dls~l~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~--~------~~~~~~~~~~~~ 98 (352)
.||++ ++.... + .++++.+.+++.+.-.+.|.|||+- - +.+++++..+..
T Consensus 117 ~ip~~~~y~~~g-~----~ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~ 175 (200)
T 2fk5_A 117 EVPVLAPKTVSA-T----EEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTT 175 (200)
T ss_dssp CEEEECCSCCSS-S----HHHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CceEecCCCCCC-c----HHHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHH
Confidence 69999 776553 1 2466788888888889999999962 2 445555554443
No 22
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=34.03 E-value=21 Score=30.63 Aligned_cols=50 Identities=8% Similarity=0.046 Sum_probs=33.4
Q ss_pred CCccEEeCCCCCCChhHHHHHHHHHHHHHHhcCeEEEEeCCCCh--HHHHHHHHHHH
Q 047561 43 AYVPIIDFGRLNEGREQRSMVIKEIGNACSRLGFFQIVNHGICQ--SILDGALSTAF 97 (352)
Q Consensus 43 ~~iPvIDls~l~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~--~~~~~~~~~~~ 97 (352)
..||++++.... + .++++++.+++.+.-.+.+.|||+-. +.+++++..+.
T Consensus 160 ~~v~~~~y~~~g-~----~ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~~ 211 (238)
T 1pvt_A 160 QGISVVEFEKPG-S----VELGLKTVEKSEGKDAVLWDKHGVVAFGKDVAEAYDRVE 211 (238)
T ss_dssp SCCEEECCCSTT-C----HHHHHHHHHHTSSCSEEEETTSCEEEEESSHHHHHHHHH
T ss_pred CCceEecCCCCC-c----HHHHHHHHHHhccCCEEEEcCCCceEecCCHHHHHHHHH
Confidence 368999987553 1 24677888888888889999999731 23444444333
No 23
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=31.57 E-value=34 Score=30.11 Aligned_cols=52 Identities=15% Similarity=0.029 Sum_probs=36.8
Q ss_pred CCCccEEeCCCCCCChhHHHHHHHHHHHHHHhcCeEEEEeCCCChHHHHHHHHHHHHhcC
Q 047561 42 AAYVPIIDFGRLNEGREQRSMVIKEIGNACSRLGFFQIVNHGICQSILDGALSTAFDFFK 101 (352)
Q Consensus 42 ~~~iPvIDls~l~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~ 101 (352)
-++|.=|||++.. ++ +..++|.+++.++|++.+.+-.++.+ +..+.++.|=.
T Consensus 13 Gaei~gvdl~~~l-~~----~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~ 64 (277)
T 3pvj_A 13 GAQISGVDISRDI-SA----EERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGD 64 (277)
T ss_dssp CEEEESCCTTSCC-CH----HHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSC
T ss_pred eEEEeCCCccccC-CH----HHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 3567778998743 22 24578999999999999999888764 33455666543
No 24
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=31.03 E-value=37 Score=30.00 Aligned_cols=52 Identities=10% Similarity=-0.052 Sum_probs=36.3
Q ss_pred CCCccEEeCCCCCCChhHHHHHHHHHHHHHHhcCeEEEEeCC-CChHHHHHHHHHHHHhcC
Q 047561 42 AAYVPIIDFGRLNEGREQRSMVIKEIGNACSRLGFFQIVNHG-ICQSILDGALSTAFDFFK 101 (352)
Q Consensus 42 ~~~iPvIDls~l~~~~~~r~~~~~~l~~A~~~~Gff~l~nhG-i~~~~~~~~~~~~~~fF~ 101 (352)
-++|+-|||++.. +++ ..++|.+++.++|++.+.+-. ++.+ +..+.++.|=.
T Consensus 25 Gaei~gvdl~~~l-~~~----~~~~l~~~l~~~Gvv~fRg~~~l~~~---~~~~~~~~fG~ 77 (301)
T 1oih_A 25 GAEIRGVKLSPDL-DAA----TVEAIQAALVRHKVIFFRGQTHLDDQ---SQEGFAKLLGE 77 (301)
T ss_dssp CEEEESCCCCTTC-CHH----HHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHTTSC
T ss_pred ceEEeCCCccccC-CHH----HHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHHhCC
Confidence 3457778888743 222 457899999999999999887 7753 44455666543
No 25
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=30.16 E-value=25 Score=30.98 Aligned_cols=37 Identities=11% Similarity=0.107 Sum_probs=28.6
Q ss_pred CccEEeCCCCCCChhHHHHHHHHHHHHHHhcCeEEEEeCCC
Q 047561 44 YVPIIDFGRLNEGREQRSMVIKEIGNACSRLGFFQIVNHGI 84 (352)
Q Consensus 44 ~iPvIDls~l~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi 84 (352)
.||++|+..+..+ .++++.+.+++.+.-.+.|.|||+
T Consensus 156 ~v~~~~y~~~~~~----~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 156 RVAYHGYEGIALD----LSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TEEEECCCCSSCC----HHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CEEEECCCCCCCC----HHHHHHHHHHhCcCCEEEEcCCce
Confidence 6999998876422 235677888888999999999996
No 26
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=29.29 E-value=23 Score=31.27 Aligned_cols=49 Identities=12% Similarity=0.083 Sum_probs=33.3
Q ss_pred CccEEeCCCCCCChhHHHHHHHHHHHHHHhcCeEEEEeCCCCh--HHHHHHHHHHH
Q 047561 44 YVPIIDFGRLNEGREQRSMVIKEIGNACSRLGFFQIVNHGICQ--SILDGALSTAF 97 (352)
Q Consensus 44 ~iPvIDls~l~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~--~~~~~~~~~~~ 97 (352)
.||++++.... + .++++.+.+++.+.-.+.+.|||+-. +.+++++..+.
T Consensus 179 ~v~v~~y~~~g-~----~ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~e 229 (274)
T 2v9l_A 179 GVGILPWMVPG-T----DAIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLID 229 (274)
T ss_dssp CEEECCCCCSS-S----HHHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHHH
T ss_pred ceeEecCCCCC-C----HHHHHHHHHHHccCCEEEEcCCCceEecCCHHHHHHHHH
Confidence 58898886543 1 24678888999888999999999631 23444444443
No 27
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=29.13 E-value=85 Score=28.33 Aligned_cols=40 Identities=13% Similarity=0.042 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhcCeEEEEeCCCC----hHHHHHHHHHHHHhcC
Q 047561 62 MVIKEIGNACSRLGFFQIVNHGIC----QSILDGALSTAFDFFK 101 (352)
Q Consensus 62 ~~~~~l~~A~~~~Gff~l~nhGi~----~~~~~~~~~~~~~fF~ 101 (352)
++.+++.+.++.-||+.=.+|||+ .+-+..+++++++|++
T Consensus 305 ~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 305 KIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 345566666778888766789985 5789999999999874
No 28
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=28.44 E-value=48 Score=29.57 Aligned_cols=52 Identities=15% Similarity=0.008 Sum_probs=36.3
Q ss_pred CCCccEEeCCCCCCChhHHHHHHHHHHHHHHhcCeEEEEeC-CCChHHHHHHHHHHHHhcC
Q 047561 42 AAYVPIIDFGRLNEGREQRSMVIKEIGNACSRLGFFQIVNH-GICQSILDGALSTAFDFFK 101 (352)
Q Consensus 42 ~~~iPvIDls~l~~~~~~r~~~~~~l~~A~~~~Gff~l~nh-Gi~~~~~~~~~~~~~~fF~ 101 (352)
-++|+=|||+... ++ +..++|.+++.++|.+.+.+- .++.+ +..+.++.|=.
T Consensus 19 Gaei~gvdl~~~L-~d----~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~ 71 (301)
T 3r1j_A 19 GARVDGVRLGGDL-DD----ATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGT 71 (301)
T ss_dssp CEEEESCCCSTTC-CH----HHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSC
T ss_pred cceEeCCCccccC-CH----HHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCC
Confidence 3567778998432 12 246789999999999999998 78765 33455666543
No 29
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=27.79 E-value=71 Score=31.58 Aligned_cols=104 Identities=14% Similarity=0.109 Sum_probs=58.5
Q ss_pred HHHHHHHHhcCCChhhhhhhhcccccceEeeecCCCCCCCCCCCCCCccCC-C--ceEEEe---c-C-----C--Cccee
Q 047561 177 ELMSAITESLGLGPKYLVNKMDEGMQVMAVNCYPPCPQPDISLGLPPHSDY-T--CLTIVL---Q-S-----S--PGLEI 242 (352)
Q Consensus 177 ~ll~~la~~Lgl~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~-~--~lTlL~---q-~-----~--~GLqv 242 (352)
.++..|+...|++. +. ....-+.+.+|++ .-....|.|. + .+|+++ . + . |-|++
T Consensus 105 ~Fr~~Ls~iTGi~~--Ls----g~~~D~~~a~Y~~------G~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~L 172 (633)
T 3kt7_A 105 QYRDFFGYVTKAGK--LS----GSKTDMSINTYTK------GCHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRL 172 (633)
T ss_dssp HHHHHHHHHHTCCC--CC----SSCCCEEEEEECT------TCEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEE
T ss_pred HHHHHHHHHhCCcc--cC----CCceeEEEEEeCC------CCeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEE
Confidence 34456666666631 00 0111266777865 2335568884 2 355554 2 2 1 44888
Q ss_pred eeCCC-------CceEEcCCCCCeEEEEeCcchhhhhCCcccCccceeecC-CCCceeEEEecc-CCCC
Q 047561 243 LDTED-------GSWKMVPKMQSSLQVHVGDHLEVLSNGRYKSVVHRAILN-RGSTRISLASLH-SLGM 302 (352)
Q Consensus 243 ~~~~~-------g~W~~V~p~~g~lvVn~Gd~l~~~SnG~~~s~~HRV~~~-~~~~R~Si~~F~-~p~~ 302 (352)
++ .+ .....|.|..|.+|++.-. -+ -.+|.|... +++.|+||+-.+ .|..
T Consensus 173 yd-~d~~~~P~~d~~~~I~P~fNrLV~F~vs------p~---~S~H~V~eV~~~~~RlSItGWF~~p~~ 231 (633)
T 3kt7_A 173 FP-SILPNVPHSDPSAKLVPQFNQIAFFKVL------PG---FSFHDXEEVKVDKHRLSIQGWYHIPQV 231 (633)
T ss_dssp CC-EEETTEECSSCSEEECCCTTEEEEEECC------TT---TCCEEECCBCSSCCEEEEEEEEECCCT
T ss_pred ec-CCCcCCCCCCceEEEecCCCeEEEEEcC------CC---CCcCCCCccCCCCCEEEEEEEeccCCC
Confidence 65 22 2477899999999987531 01 246765321 267999998755 4433
No 30
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=27.73 E-value=89 Score=26.03 Aligned_cols=68 Identities=21% Similarity=0.324 Sum_probs=46.3
Q ss_pred CCCCCccCCC--ceEEEecCCCcceeeeCCCCceEEcCCCCCeEEEEeCcchhhhhCCcc----cCccceeecCCCCcee
Q 047561 219 LGLPPHSDYT--CLTIVLQSSPGLEILDTEDGSWKMVPKMQSSLQVHVGDHLEVLSNGRY----KSVVHRAILNRGSTRI 292 (352)
Q Consensus 219 ~~~~~HtD~~--~lTlL~q~~~GLqv~~~~~g~W~~V~p~~g~lvVn~Gd~l~~~SnG~~----~s~~HRV~~~~~~~R~ 292 (352)
..+.+|+|.. .++++. ||++ ..++ ..+.+|+.-..|..|.. -+-.|.|...+...|+
T Consensus 113 ~~I~pH~g~~n~~lR~HL----~L~~--p~~~-----------~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~Rv 175 (197)
T 3rcq_A 113 THVWPHTGPTNCRLRMHL----GLVI--PKEG-----------CKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRL 175 (197)
T ss_dssp EEEEEECCSCTTEEEEEE----EEEC--CSSS-----------EEEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEE
T ss_pred CCcCCeeCCCCCeEEEEE----EEEe--CCCC-----------cEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEE
Confidence 3466788874 566666 6666 3222 33556777777887764 3678999988778899
Q ss_pred EEEe-ccCCCCC
Q 047561 293 SLAS-LHSLGMD 303 (352)
Q Consensus 293 Si~~-F~~p~~d 303 (352)
-+.+ |.+|+..
T Consensus 176 vL~~D~~rPdl~ 187 (197)
T 3rcq_A 176 IFIVDVWHPELT 187 (197)
T ss_dssp EEEEEEECTTSC
T ss_pred EEEEeeeCCCCC
Confidence 8877 6677654
No 31
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=27.66 E-value=1.1e+02 Score=25.65 Aligned_cols=41 Identities=12% Similarity=0.044 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHHHHHhcCeEEEEe-CCCChHHHHHHHHHHHH
Q 047561 58 EQRSMVIKEIGNACSRLGFFQIVN-HGICQSILDGALSTAFD 98 (352)
Q Consensus 58 ~~r~~~~~~l~~A~~~~Gff~l~n-hGi~~~~~~~~~~~~~~ 98 (352)
+.+.+..++|.+.+.++..++|.+ +|++...++++....+.
T Consensus 3 e~K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 44 (213)
T 3jsy_A 3 PWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRD 44 (213)
T ss_dssp HHHHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhC
Confidence 456678888999999988888875 68988888877776653
No 32
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.46 E-value=29 Score=23.87 Aligned_cols=41 Identities=10% Similarity=0.176 Sum_probs=33.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhhhhc
Q 047561 158 PNYRENMGKYCTEERKLALELMSAITESLGLGPKYLVNKMD 198 (352)
Q Consensus 158 p~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~ 198 (352)
.+-+..+++|+..-.+-...-+..||..+||+.+...-.|.
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWFq 54 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFE 54 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence 45677888898888888888889999999999887776664
No 33
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=25.72 E-value=77 Score=17.81 Aligned_cols=18 Identities=28% Similarity=0.591 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHhcCeEE
Q 047561 61 SMVIKEIGNACSRLGFFQ 78 (352)
Q Consensus 61 ~~~~~~l~~A~~~~Gff~ 78 (352)
..+++.+.-.|.+-|||+
T Consensus 9 s~LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFY 26 (30)
T ss_dssp HHHHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHHHhccCcccc
Confidence 357788899999999998
No 34
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=24.33 E-value=70 Score=20.18 Aligned_cols=23 Identities=17% Similarity=0.302 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHhcCCChhh
Q 047561 170 EERKLALELMSAITESLGLGPKY 192 (352)
Q Consensus 170 ~~~~la~~ll~~la~~Lgl~~~~ 192 (352)
.-.+|+..|.+++++.||.|++.
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~ 40 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQA 40 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 45678889999999999999764
No 35
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=24.11 E-value=30 Score=28.93 Aligned_cols=49 Identities=22% Similarity=0.253 Sum_probs=31.6
Q ss_pred CCccEEeCCCCCCChhHHHHHHHHHHHHHHhcC---eEEEEeCCCCh--HHHHHHHHHHH
Q 047561 43 AYVPIIDFGRLNEGREQRSMVIKEIGNACSRLG---FFQIVNHGICQ--SILDGALSTAF 97 (352)
Q Consensus 43 ~~iPvIDls~l~~~~~~r~~~~~~l~~A~~~~G---ff~l~nhGi~~--~~~~~~~~~~~ 97 (352)
..||++++. . + ..++++.+.+++.+.+ .+.|.|||+-. +.+++++..+.
T Consensus 138 ~~vp~~~~~-~--g---~~~La~~i~~~l~~~~~~~avll~nHG~~~~G~~~~eA~~~~~ 191 (208)
T 2irp_A 138 IKIPIFPNE-Q--N---IPLLAKEVENYFKTSEDKYGFLIRGHGLYTWGRSMEEALIHTE 191 (208)
T ss_dssp CEEEEECCC-S--C---HHHHHHHHHHHHHHCSCCSCEEETTTEEEEEESSHHHHHHHHH
T ss_pred cceeeecCC-C--C---HHHHHHHHHHHHhcCCCceEEEEcCCCCeEecCCHHHHHHHHH
Confidence 468998874 2 1 2357788888888765 78899999631 23444444433
No 36
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=22.94 E-value=39 Score=30.07 Aligned_cols=70 Identities=16% Similarity=0.113 Sum_probs=45.4
Q ss_pred CCCccchhhhhhhcCCCCC--CCCCCCCCCCCCCCCCCCCCccEEeCCCCCCChhHHHHHHHHHHHHHHhcCeEEEEeC
Q 047561 6 SSSSFSTGKSAQEGALPYV--PDCYVIPSSHRPNMAPEAAYVPIIDFGRLNEGREQRSMVIKEIGNACSRLGFFQIVNH 82 (352)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~--p~~y~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~r~~~~~~l~~A~~~~Gff~l~nh 82 (352)
...|...|..+.++...++ |..+..-|...+ ..=...||+..|..+ ...+-+.++.+.+.++||.-|.-+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~la~~IDhTlL~p~--~T~~dI~~lc~eA~~~g~aaVCV~ 94 (288)
T 3oa3_A 23 SSLNNEEWDLLISGKKATLQYPIPLLCYPAPEV-----VSIAQIIDHTQLSLS--ATGSQIDVLCAEAKEYGFATVCVR 94 (288)
T ss_dssp TTCCHHHHHHHHHHHHTTSCSSCCCSCSCCCCG-----GGGGGGEEEECCCTT--CCHHHHHHHHHHHHHHTCSEEEEC
T ss_pred CCCCcHHHHHHHHHHHHhcCCccccccCCCCCH-----HHHHHhcCcccCCCC--CCHHHHHHHHHHHHhcCCcEEEEC
Confidence 4567778888888888887 444444333221 223677999998732 223345677777889999887744
No 37
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=22.41 E-value=2e+02 Score=23.15 Aligned_cols=40 Identities=13% Similarity=0.136 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHhcC-eEEEEe-CCCChHHHHHHHHHHHH
Q 047561 59 QRSMVIKEIGNACSRLG-FFQIVN-HGICQSILDGALSTAFD 98 (352)
Q Consensus 59 ~r~~~~~~l~~A~~~~G-ff~l~n-hGi~~~~~~~~~~~~~~ 98 (352)
.+.+.+++|.+.+.++. .++|.+ +|++...+.++....+.
T Consensus 5 ~K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr~ 46 (173)
T 2j01_J 5 RNVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALKQ 46 (173)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45677888888888888 666664 58888777777766553
No 38
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=21.92 E-value=1.9e+02 Score=23.36 Aligned_cols=41 Identities=15% Similarity=0.270 Sum_probs=31.6
Q ss_pred hHHHHHHHHHHHHHHhcCeEEEEe-CCCChHHHHHHHHHHHH
Q 047561 58 EQRSMVIKEIGNACSRLGFFQIVN-HGICQSILDGALSTAFD 98 (352)
Q Consensus 58 ~~r~~~~~~l~~A~~~~Gff~l~n-hGi~~~~~~~~~~~~~~ 98 (352)
+.+.+.+++|.+.++++..++|.+ +|++...+.++....+.
T Consensus 6 ~~K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~ 47 (180)
T 1zav_A 6 QQKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLRE 47 (180)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 345678888999999999888885 58888777777766654
No 39
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=21.16 E-value=1.3e+02 Score=22.79 Aligned_cols=36 Identities=17% Similarity=0.169 Sum_probs=25.7
Q ss_pred EEeCCCCCCChhHHHHHHHHHHHHHHhcCeEEEEeCCCChH
Q 047561 47 IIDFGRLNEGREQRSMVIKEIGNACSRLGFFQIVNHGICQS 87 (352)
Q Consensus 47 vIDls~l~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~~ 87 (352)
|||++.+.. .. -..+|.+.|+++|+..+=-.|.+.+
T Consensus 51 VlDl~~l~~-~~----dl~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 51 VINVSGLES-PV----NWPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp EEEEEECCS-SC----CHHHHHHHHHTTTCEEEEEESCCCH
T ss_pred EEEccccCC-hH----HHHHHHHHHHHcCCEEEEEeCCCcH
Confidence 579998752 11 1467889999999998876665544
No 40
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=20.51 E-value=54 Score=23.73 Aligned_cols=32 Identities=13% Similarity=0.278 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhccc-ccceEe
Q 047561 175 ALELMSAITESLGLGPKYLVNKMDEG-MQVMAV 206 (352)
Q Consensus 175 a~~ll~~la~~Lgl~~~~~~~~~~~~-~~~lrl 206 (352)
+.+||+.|++.|+++.++|.+.--.+ .-.+|+
T Consensus 19 G~~l~~~la~ll~l~~~~Ft~i~V~g~aVTFrV 51 (91)
T 2qt7_A 19 GVKLLEILAEHVHMSSGSFINISVVGPALTFRI 51 (91)
T ss_dssp HHHHHHHHHHHHTSCGGGEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHhcCCccceeeeEeecceEEEEe
Confidence 67899999999999999888764333 333666
No 41
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=20.13 E-value=1e+02 Score=19.81 Aligned_cols=28 Identities=4% Similarity=0.113 Sum_probs=14.5
Q ss_pred cEEeCCCCCCChhHHHHHHHHHHHHHHh
Q 047561 46 PIIDFGRLNEGREQRSMVIKEIGNACSR 73 (352)
Q Consensus 46 PvIDls~l~~~~~~r~~~~~~l~~A~~~ 73 (352)
|+|.+.--..+.+++++++++|.+++.+
T Consensus 1 P~I~I~~~grt~eqK~~L~~~it~~~~~ 28 (62)
T 3m20_A 1 PVLIVYGPKLDVGKKREFVERLTSVAAE 28 (62)
T ss_dssp CEEEEECSCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHH
Confidence 4444443113455666666666666543
Done!