Query 047565
Match_columns 106
No_of_seqs 104 out of 348
Neff 4.0
Searched_HMMs 13730
Date Mon Mar 25 21:47:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047565.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/047565hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vqoq1 b.34.5.1 (Q:1-95) Ribo 100.0 2.4E-42 1.7E-46 238.6 6.8 78 2-79 1-78 (95)
2 d2do3a1 b.34.5.5 (A:462-523) T 82.0 0.35 2.6E-05 29.3 2.1 39 30-79 7-45 (62)
3 d2vv5a1 b.38.1.3 (A:113-179) M 73.1 1.4 9.9E-05 25.7 2.9 31 30-75 14-44 (67)
4 d1v29b_ b.34.4.4 (B:) Cobalt-c 69.6 1.3 9.4E-05 32.2 2.6 36 33-69 141-177 (229)
5 d1ugpb_ b.34.4.4 (B:) Cobalt-c 64.9 1.8 0.00013 31.3 2.6 35 33-68 138-173 (226)
6 d1t9ha1 b.40.4.5 (A:1-67) Prob 63.2 3.8 0.00028 24.0 3.4 23 36-70 44-66 (67)
7 d2qdyb1 b.34.4.4 (B:1-211) Iro 63.1 2.6 0.00019 30.1 3.1 32 33-65 122-154 (211)
8 d2rdea1 b.45.2.1 (A:138-247) H 62.1 4.3 0.00031 26.8 3.8 45 32-79 40-88 (110)
9 d1vqot1 b.34.5.1 (T:1-119) Rib 55.7 2.9 0.00021 27.7 2.1 55 34-98 42-101 (119)
10 d1nz9a_ b.34.5.4 (A:) N-utiliz 53.1 3.7 0.00027 23.5 2.1 26 33-68 4-29 (58)
11 d1ep3b1 b.43.4.2 (B:2-102) Dih 49.7 8 0.00058 22.8 3.4 19 26-44 77-95 (101)
12 d2bmwa1 b.43.4.2 (A:9-141) Fer 48.4 5.7 0.00041 25.2 2.6 18 27-44 109-126 (133)
13 d1oota_ b.34.2.1 (A:) Hypothet 47.4 4.3 0.00031 22.7 1.7 32 33-64 19-50 (58)
14 d2cnda1 b.43.4.2 (A:11-124) Ni 45.7 7.9 0.00057 23.3 2.9 19 26-44 86-104 (114)
15 d1fdra1 b.43.4.2 (A:2-100) Fer 44.1 6.6 0.00048 23.6 2.3 20 26-45 73-92 (99)
16 d2d6fa1 b.38.3.1 (A:2-73) Glut 42.7 16 0.0012 22.1 4.0 50 29-78 8-62 (72)
17 d1nppa2 b.34.5.4 (A:191-248) N 42.5 13 0.00098 20.9 3.4 26 33-68 4-29 (58)
18 d1fnda1 b.43.4.2 (A:19-154) Fe 41.3 8.4 0.00061 24.9 2.6 18 27-44 114-131 (136)
19 d1umka1 b.43.4.2 (A:30-153) cy 40.4 11 0.00077 22.9 2.9 19 26-44 96-114 (124)
20 d1uffa_ b.34.2.1 (A:) Intersec 32.5 6.9 0.00051 23.1 1.0 28 33-64 23-54 (93)
21 d1udla_ b.34.2.1 (A:) Intersec 32.1 15 0.0011 21.9 2.5 28 33-64 52-81 (98)
22 d1jb9a1 b.43.4.2 (A:6-162) Fer 29.3 17 0.0012 24.1 2.6 20 27-46 129-148 (157)
23 d1k4us_ b.34.2.1 (S:) p67phox 29.1 19 0.0014 20.1 2.5 30 33-64 23-52 (62)
24 d1ng2a2 b.34.2.1 (A:215-332) p 27.9 14 0.00098 22.7 1.8 27 33-63 32-60 (118)
25 d1gvha2 b.43.4.2 (A:147-253) F 27.0 23 0.0016 20.8 2.7 19 26-44 82-101 (107)
26 d1wlpb1 b.34.2.1 (B:229-281) p 26.0 21 0.0015 19.3 2.2 27 33-63 18-46 (53)
27 d1ty0a1 b.40.2.2 (A:4-99) Stre 24.6 21 0.0016 22.7 2.3 17 31-47 58-74 (96)
28 d1u0la1 b.40.4.5 (A:3-68) Prob 24.6 43 0.0031 19.0 3.6 11 34-44 41-51 (66)
29 d1jb0e_ b.34.4.2 (E:) Photosys 24.5 32 0.0023 20.7 3.0 28 35-70 2-29 (69)
30 d1fcda2 c.3.1.5 (A:115-255) Fl 24.1 29 0.0021 21.9 3.0 26 26-56 22-47 (141)
31 d1krha1 b.43.4.2 (A:106-205) B 23.6 26 0.0019 20.3 2.5 19 26-44 75-94 (100)
32 d1cqxa2 b.43.4.2 (A:151-261) F 23.0 21 0.0015 21.2 2.0 19 26-44 85-104 (111)
33 d2f23a2 d.26.1.2 (A:78-156) Gr 22.7 36 0.0026 19.7 3.0 23 25-47 46-68 (79)
34 d1a8pa1 b.43.4.2 (A:2-100) Fer 22.4 21 0.0015 21.3 1.9 18 26-43 74-91 (99)
35 d2vgba1 b.58.1.1 (A:160-261) P 21.9 70 0.0051 18.8 4.4 38 28-78 46-83 (102)
36 d2zjrr1 b.34.5.1 (R:4-113) Rib 21.7 27 0.002 22.2 2.5 33 34-76 13-45 (110)
37 d1vqoo1 c.12.1.1 (O:1-115) Rib 21.3 24 0.0017 22.8 2.1 29 14-42 32-60 (115)
38 d1v76a_ b.137.1.1 (A:) Hypothe 21.1 62 0.0045 19.5 4.1 43 53-101 24-66 (92)
39 d1xjva2 b.40.4.3 (A:149-299) P 21.1 11 0.00084 25.4 0.4 39 28-66 79-124 (151)
40 d1an8a1 b.40.2.2 (A:3-95) Stre 20.6 27 0.0019 22.1 2.2 20 29-48 56-75 (93)
41 d1tvca1 b.43.4.2 (A:2-110) Met 20.5 47 0.0034 19.6 3.3 19 26-44 86-105 (109)
No 1
>d1vqoq1 b.34.5.1 (Q:1-95) Ribosomal proteins L21e {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=100.00 E-value=2.4e-42 Score=238.58 Aligned_cols=78 Identities=26% Similarity=0.370 Sum_probs=76.5
Q ss_pred CCCCCCCcccccccCCcccCCCCCchHHHHHhccCCCEEEEEEcCceecCCCCCcccCcceEEEcccCCEEEEEEece
Q 047565 2 PAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 79 (106)
Q Consensus 2 ~~S~G~R~~TR~~fsk~fR~~G~~~ls~~l~~yk~GD~VdIkid~svqKGMPHk~YHGkTG~V~~v~~~AvgV~VnK~ 79 (106)
|+|+|+|++||++|||+||++|++|+|+||++|++||+|||++|||+||||||++|||+||+|+|++++||+|+|++.
T Consensus 1 p~S~G~R~~TR~~~sk~~R~~G~~~ls~~l~~y~~GD~V~I~idpsv~kGmPh~~yhGkTG~V~~~~g~a~~V~v~~g 78 (95)
T d1vqoq1 1 PSSNGPLEGTRGKLKNKPRDRGTSPPQRAVEEFDDGEKVHLKIDPSVPNGRFHPRFDGQTGTVEGKQGDAYKVDIVDG 78 (95)
T ss_dssp CCCCCTTTTCTTTTSCCGGGCSSCCSHHHHCCCCTTCEEEECCCTTCCSSCCCGGGTTCEEEEEEEETTEEEEEEEET
T ss_pred CCCCCcCccChHHhccCccccCCCChhhheeeccCCCEEEEEecCCeecCccceeecCCceeEEeecCeEEEEEEecC
Confidence 689999999999999999999999999999999999999999999999999999999999999999999999999965
No 2
>d2do3a1 b.34.5.5 (A:462-523) Transcription elongation factor SPT5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.95 E-value=0.35 Score=29.27 Aligned_cols=39 Identities=26% Similarity=0.388 Sum_probs=28.6
Q ss_pred HHHhccCCCEEEEEEcCceecCCCCCcccCcceEEEcccCCEEEEEEece
Q 047565 30 YLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 79 (106)
Q Consensus 30 ~l~~yk~GD~VdIkid~svqKGMPHk~YHGkTG~V~~v~~~AvgV~VnK~ 79 (106)
+-..|++||-|-+. .| +|.|.||-|+.+.+.-+. .+.++
T Consensus 7 LrK~F~~GDhVkVi------~G----~~~g~tGlVV~v~~~~v~-~~SD~ 45 (62)
T d2do3a1 7 LRKYFKMGDHVKVI------AG----RFEGDTGLIVRVEENFVI-LFSDL 45 (62)
T ss_dssp CCSSCCTTCEEEES------SS----TTTTCEEEEEEECSSCEE-EEESS
T ss_pred heeccCCCCeEEEe------cc----EEcCccEEEEEEeCCEEE-EEeCC
Confidence 34569999999762 33 799999999999877555 44453
No 3
>d2vv5a1 b.38.1.3 (A:113-179) Mechanosensitive channel protein MscS (YggB), middle domain {Escherichia coli [TaxId: 562]}
Probab=73.09 E-value=1.4 Score=25.70 Aligned_cols=31 Identities=29% Similarity=0.580 Sum_probs=24.8
Q ss_pred HHHhccCCCEEEEEEcCceecCCCCCcccCcceEEEcccCCEEEEE
Q 047565 30 YLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVE 75 (106)
Q Consensus 30 ~l~~yk~GD~VdIkid~svqKGMPHk~YHGkTG~V~~v~~~AvgV~ 75 (106)
+.+.|++||.|.| .|-.|+|..++=++..+.
T Consensus 14 ~~~pf~vGD~I~i---------------~~~~G~V~~I~l~~T~l~ 44 (67)
T d2vv5a1 14 MFRPFRAGEYVDL---------------GGVAGTVLSVQIFSTTMR 44 (67)
T ss_dssp TTCSSCTTCEEES---------------SSCEEEEEEECSSEEEEE
T ss_pred eeCCccCCCEEEE---------------CCEEEEEEEEeceEEEEE
Confidence 3467999999987 368899999998886654
No 4
>d1v29b_ b.34.4.4 (B:) Cobalt-containing nitrile hydratase {Bacillus smithii [TaxId: 1479]}
Probab=69.63 E-value=1.3 Score=32.16 Aligned_cols=36 Identities=14% Similarity=0.379 Sum_probs=25.5
Q ss_pred hccCCCEEEEEEcCc-eecCCCCCcccCcceEEEcccC
Q 047565 33 TYKIGDYVDVKVNGA-VHKGMPHKFYHGRTGRVWNVTK 69 (106)
Q Consensus 33 ~yk~GD~VdIkid~s-vqKGMPHk~YHGkTG~V~~v~~ 69 (106)
.|++||.|-++-... -|--+| .+=.||+|+|..+.|
T Consensus 141 ~F~vGd~Vrv~~~~~~gHtRlP-~Y~rg~~G~i~~~~g 177 (229)
T d1v29b_ 141 RFEVGERIKTRNIHPTGHTRFP-RYVRDKYGVIEEVYG 177 (229)
T ss_dssp SCCTTCEEEECCCCCSSCCSCC-GGGTTCEEEEEEEEE
T ss_pred cCCCCCEEEEeeCCCCCccccc-hhhcCCeeEEEEEec
Confidence 499999999975443 344455 355799999987643
No 5
>d1ugpb_ b.34.4.4 (B:) Cobalt-containing nitrile hydratase {Pseudonocardia thermophila [TaxId: 1848]}
Probab=64.89 E-value=1.8 Score=31.31 Aligned_cols=35 Identities=26% Similarity=0.416 Sum_probs=24.4
Q ss_pred hccCCCEEEEEEcC-ceecCCCCCcccCcceEEEccc
Q 047565 33 TYKIGDYVDVKVNG-AVHKGMPHKFYHGRTGRVWNVT 68 (106)
Q Consensus 33 ~yk~GD~VdIkid~-svqKGMPHk~YHGkTG~V~~v~ 68 (106)
.|++||.|-++-.. .-|--+| .+=.||+|+|....
T Consensus 138 ~F~vGd~Vrv~~~~~~gHtR~P-~Y~rg~~G~I~~~~ 173 (226)
T d1ugpb_ 138 KFKEGDVVRFSTASPKGHARRA-RYVRGKTGTVVKHH 173 (226)
T ss_dssp SCCTTCEEEECCCCCSSCCCCC-GGGTTCEEEEEEEE
T ss_pred ccCCCCEEEEccCCCCCceeCc-hhhcCCeeEEEEEe
Confidence 49999999997543 3344455 35579999997654
No 6
>d1t9ha1 b.40.4.5 (A:1-67) Probable GTPase EngC (YjeQ), N-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=63.20 E-value=3.8 Score=24.03 Aligned_cols=23 Identities=26% Similarity=0.621 Sum_probs=15.7
Q ss_pred CCCEEEEEEcCceecCCCCCcccCcceEEEcccCC
Q 047565 36 IGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 70 (106)
Q Consensus 36 ~GD~VdIkid~svqKGMPHk~YHGkTG~V~~v~~~ 70 (106)
+||.|.|.... ..+|.|.++-+|
T Consensus 44 VGD~V~~~~~~------------~~~g~I~~I~pR 66 (67)
T d1t9ha1 44 VGDYVVYQAEN------------DKEGYLMEIKER 66 (67)
T ss_dssp BTCEEEEECCT------------TSCEEEEEECCC
T ss_pred cCcEEEEEEcc------------CCeEEEEEEecC
Confidence 79999998653 235666666554
No 7
>d2qdyb1 b.34.4.4 (B:1-211) Iron-containing nitrile hydratase {Rhodococcus erythropolis [TaxId: 1833]}
Probab=63.12 E-value=2.6 Score=30.11 Aligned_cols=32 Identities=31% Similarity=0.570 Sum_probs=21.9
Q ss_pred hccCCCEEEEEEcCc-eecCCCCCcccCcceEEE
Q 047565 33 TYKIGDYVDVKVNGA-VHKGMPHKFYHGRTGRVW 65 (106)
Q Consensus 33 ~yk~GD~VdIkid~s-vqKGMPHk~YHGkTG~V~ 65 (106)
.|++||.|-++-... -|--+| .+=.||+|+|.
T Consensus 122 ~F~vGd~Vrv~~~~~~gHtRlP-~Y~rgk~G~I~ 154 (211)
T d2qdyb1 122 TFEVGQRVRVRDEYVPGHIRMP-AYCRGRVGTIS 154 (211)
T ss_dssp CCCTTCEEEECCCCCSSCCSCC-GGGTTCEEEEE
T ss_pred cCCCCCEEEEccCCCCCccccc-hhhcCCeEEEE
Confidence 599999999975433 222344 34579999886
No 8
>d2rdea1 b.45.2.1 (A:138-247) Hypothetical protein VCA0042, C-terminal domain {Vibrio cholerae O395 [TaxId: 345073]}
Probab=62.13 E-value=4.3 Score=26.78 Aligned_cols=45 Identities=24% Similarity=0.536 Sum_probs=34.7
Q ss_pred HhccCCCEEEEEEcCceecCCCCCcccCcceEEEcccCC----EEEEEEece
Q 047565 32 RTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR----AIGVEINKQ 79 (106)
Q Consensus 32 ~~yk~GD~VdIkid~svqKGMPHk~YHGkTG~V~~v~~~----AvgV~VnK~ 79 (106)
..|.+||.|.|++-+-.-++- .|-=-+|+|.|.+.. .|||+.+.-
T Consensus 40 r~~qvgd~v~l~v~~~~~g~~---~~~PL~G~icnlQkS~hyaryGv~Fde~ 88 (110)
T d2rdea1 40 KTYQVGDLVALEIFSDLRGTK---TFPPLTGKICNLQRSLHHARYGLEFNEE 88 (110)
T ss_dssp CCCCTTCEEEEEEBSSTTSSC---BCSCEEEEEEEEEECSSCEEEEEEECHH
T ss_pred CceecCCeEEEEEEcCCCCCc---ccCCccceeecchhhhcccccceeechh
Confidence 568899999999977665442 455678999998875 589988764
No 9
>d1vqot1 b.34.5.1 (T:1-119) Ribosomal proteins L24 (L24p) {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=55.68 E-value=2.9 Score=27.65 Aligned_cols=55 Identities=24% Similarity=0.204 Sum_probs=37.6
Q ss_pred ccCCCEEEEEEcCceecCCCCCcccCcceEEEcccCCEEEEEEe-----ceeCceeceeecceeeEEeee
Q 047565 34 YKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEIN-----KQVKFFMPFLFDSFRCIYLCE 98 (106)
Q Consensus 34 yk~GD~VdIkid~svqKGMPHk~YHGkTG~V~~v~~~AvgV~Vn-----K~V~gk~~~~~~~~~~~~~~~ 98 (106)
.+.||.|-|.- | .|-|++|.|..|......|.|. |.-+..+.+-|+.-.+...|.
T Consensus 42 IkkGD~V~Vi~-G---------k~KGk~GkV~~V~~k~~~V~Vegin~~k~~~k~~~~pIh~SNv~i~~~ 101 (119)
T d1vqot1 42 VNAGDTVEVLR-G---------DFAGEEGEVINVDLDKAVIHVEDVTLEKTDGEEVPRPLDTSNVRVTDL 101 (119)
T ss_dssp CCTTCEEEECS-S---------TTTTCEEEEEEEETTTTEEEETTCEEECTTSCEEECCBCGGGEEEEEC
T ss_pred eeCCCEEEEee-c---------CCCCCcceEEEEECCCCEEEEeCcEEEecCCceeeccCchHHEEEEeC
Confidence 35899998832 2 4789999999998776655553 333455666777777766654
No 10
>d1nz9a_ b.34.5.4 (A:) N-utilization substance G protein NusG, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=53.09 E-value=3.7 Score=23.51 Aligned_cols=26 Identities=27% Similarity=0.388 Sum_probs=19.2
Q ss_pred hccCCCEEEEEEcCceecCCCCCcccCcceEEEccc
Q 047565 33 TYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVT 68 (106)
Q Consensus 33 ~yk~GD~VdIkid~svqKGMPHk~YHGkTG~V~~v~ 68 (106)
.|++||.|.|.-- -|.|-.|.|..+.
T Consensus 4 ~F~~Gd~V~I~~G----------pF~g~~g~V~~i~ 29 (58)
T d1nz9a_ 4 AFREGDQVRVVSG----------PFADFTGTVTEIN 29 (58)
T ss_dssp SCCTTCEEEECSG----------GGTTCEEEEEEEE
T ss_pred cccCCCEEEEecc----------CCCCCEEEEEEEc
Confidence 5899999998422 3677788787664
No 11
>d1ep3b1 b.43.4.2 (B:2-102) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]}
Probab=49.74 E-value=8 Score=22.81 Aligned_cols=19 Identities=26% Similarity=0.134 Sum_probs=16.7
Q ss_pred chHHHHHhccCCCEEEEEE
Q 047565 26 PLSTYLRTYKIGDYVDVKV 44 (106)
Q Consensus 26 ~ls~~l~~yk~GD~VdIki 44 (106)
..+.+|...++||.|+|.+
T Consensus 77 ~~t~~l~~l~~Gd~v~v~G 95 (101)
T d1ep3b1 77 TGTYKLSKLESGAKVDVMG 95 (101)
T ss_dssp SHHHHHHTCCTTCEEEEEE
T ss_pred hhhHHHHhCCCCCEEEEec
Confidence 4689999999999999865
No 12
>d2bmwa1 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]}
Probab=48.39 E-value=5.7 Score=25.23 Aligned_cols=18 Identities=33% Similarity=0.383 Sum_probs=16.4
Q ss_pred hHHHHHhccCCCEEEEEE
Q 047565 27 LSTYLRTYKIGDYVDVKV 44 (106)
Q Consensus 27 ls~~l~~yk~GD~VdIki 44 (106)
.|.||.+.++||.|.|.+
T Consensus 109 ~S~yL~~lk~GD~v~v~G 126 (133)
T d2bmwa1 109 CSTYLTHIEPGSEVKITG 126 (133)
T ss_dssp HHHHHHTCCTTCEEEEEE
T ss_pred ehhhHhhCCCCCEEEEeC
Confidence 589999999999999976
No 13
>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=47.42 E-value=4.3 Score=22.72 Aligned_cols=32 Identities=16% Similarity=0.266 Sum_probs=18.5
Q ss_pred hccCCCEEEEEEcCceecCCCCCcccCcceEE
Q 047565 33 TYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRV 64 (106)
Q Consensus 33 ~yk~GD~VdIkid~svqKGMPHk~YHGkTG~V 64 (106)
.|++||.|.|.-..-...|.=.....|++|-|
T Consensus 19 s~~~Gd~v~vl~~~~~~~~W~~~~~~g~~G~v 50 (58)
T d1oota_ 19 PFRKGDVITILKKSDSQNDWWTGRVNGREGIF 50 (58)
T ss_dssp CBCTTCEEEEEECCSCTTSEEEEEETTEEEEE
T ss_pred cCCCCCEEEEEEeecCCCCEEEEEECCcEEEE
Confidence 48999999986433222332222356776644
No 14
>d2cnda1 b.43.4.2 (A:11-124) Nitrate reductase core domain {Corn (Zea mays) [TaxId: 4577]}
Probab=45.71 E-value=7.9 Score=23.27 Aligned_cols=19 Identities=37% Similarity=0.763 Sum_probs=17.0
Q ss_pred chHHHHHhccCCCEEEEEE
Q 047565 26 PLSTYLRTYKIGDYVDVKV 44 (106)
Q Consensus 26 ~ls~~l~~yk~GD~VdIki 44 (106)
.+|.+|.+.++||.|.|.+
T Consensus 86 ~~s~~l~~l~~Gd~v~i~g 104 (114)
T d2cnda1 86 LMTQYLDSLPVGSYIDVKG 104 (114)
T ss_dssp HHHHHHHHCCTTCEEEEEE
T ss_pred hhHHHHhhCCCCCEEEEEC
Confidence 4688999999999999976
No 15
>d1fdra1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=44.08 E-value=6.6 Score=23.63 Aligned_cols=20 Identities=40% Similarity=0.385 Sum_probs=17.0
Q ss_pred chHHHHHhccCCCEEEEEEc
Q 047565 26 PLSTYLRTYKIGDYVDVKVN 45 (106)
Q Consensus 26 ~ls~~l~~yk~GD~VdIkid 45 (106)
..|.+|...++||.|.|...
T Consensus 73 ~~S~~l~~lk~GD~v~v~gP 92 (99)
T d1fdra1 73 KLSPRLAALKPGDEVQVVSE 92 (99)
T ss_dssp SSHHHHHTCCTTCEEEEESS
T ss_pred HHHHHHhhCCCCCEEEECcC
Confidence 36889999999999999653
No 16
>d2d6fa1 b.38.3.1 (A:2-73) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=42.74 E-value=16 Score=22.09 Aligned_cols=50 Identities=24% Similarity=0.287 Sum_probs=31.6
Q ss_pred HHHHhc--cCCCEEEEEEcCceecCCCCCcc-cCcceEEEcc--cCCEEEEEEec
Q 047565 29 TYLRTY--KIGDYVDVKVNGAVHKGMPHKFY-HGRTGRVWNV--TKRAIGVEINK 78 (106)
Q Consensus 29 ~~l~~y--k~GD~VdIkid~svqKGMPHk~Y-HGkTG~V~~v--~~~AvgV~VnK 78 (106)
.+|... ++||+|-|.-+..+..|+==++| +.-.+.|+=+ +|.-+||.+.+
T Consensus 8 ~fL~~~~i~vGD~V~i~~~~~~~eGilmP~~e~sd~~~iVlKL~nGYNiGi~~~~ 62 (72)
T d2d6fa1 8 KFLESASIDVGDMVLVEKPDVTYEGMVLDRADDADDRHIVLKLENGYNIGVEISD 62 (72)
T ss_dssp HHHHTTTCCTTCEEEEECSSCEEEEEECCCCTTSCSSEEEEECTTSCEEEEECTT
T ss_pred HHHHHcCCCCCCEEEEEECCcEEEEEEcCCcccCCCCEEEEEecCceeEeeeccc
Confidence 445444 48999999999999999433344 3444444444 45555655554
No 17
>d1nppa2 b.34.5.4 (A:191-248) N-utilization substance G protein NusG, C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=42.55 E-value=13 Score=20.89 Aligned_cols=26 Identities=35% Similarity=0.478 Sum_probs=17.8
Q ss_pred hccCCCEEEEEEcCceecCCCCCcccCcceEEEccc
Q 047565 33 TYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVT 68 (106)
Q Consensus 33 ~yk~GD~VdIkid~svqKGMPHk~YHGkTG~V~~v~ 68 (106)
+|++||.|.|.-- | |-|-.|+|..+.
T Consensus 4 df~~Gd~V~I~~G-------p---F~g~~g~V~~i~ 29 (58)
T d1nppa2 4 EFEKGDQVRVIEG-------P---FMNFTGTVEEVH 29 (58)
T ss_dssp SCCTTCEEEECSS-------T---TTTCEEEEEEEE
T ss_pred cccCCCEEEEccc-------C---CCCCEEEEEEEc
Confidence 5899999999422 3 556666676553
No 18
>d1fnda1 b.43.4.2 (A:19-154) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Spinach (Spinacia oleracea) [TaxId: 3562]}
Probab=41.31 E-value=8.4 Score=24.86 Aligned_cols=18 Identities=28% Similarity=0.276 Sum_probs=16.5
Q ss_pred hHHHHHhccCCCEEEEEE
Q 047565 27 LSTYLRTYKIGDYVDVKV 44 (106)
Q Consensus 27 ls~~l~~yk~GD~VdIki 44 (106)
.|.||.+.++||.|.|.+
T Consensus 114 ~S~~L~dLk~GD~V~v~G 131 (136)
T d1fnda1 114 CSNFLCDLKPGAEVKLTG 131 (136)
T ss_dssp HHHHHHTCCTTCEEEEEE
T ss_pred EehhhccCCCcCEEEEeC
Confidence 589999999999999976
No 19
>d1umka1 b.43.4.2 (A:30-153) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.36 E-value=11 Score=22.92 Aligned_cols=19 Identities=32% Similarity=0.669 Sum_probs=16.9
Q ss_pred chHHHHHhccCCCEEEEEE
Q 047565 26 PLSTYLRTYKIGDYVDVKV 44 (106)
Q Consensus 26 ~ls~~l~~yk~GD~VdIki 44 (106)
..+.+|...++||.|.|.+
T Consensus 96 ~~s~~l~~l~~GD~v~v~g 114 (124)
T d1umka1 96 KMSQYLESMQIGDTIEFRG 114 (124)
T ss_dssp HHHHHHHHCCTTCEEEEEE
T ss_pred chHHHHhcCCCCCEEEEEC
Confidence 3678999999999999976
No 20
>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.53 E-value=6.9 Score=23.08 Aligned_cols=28 Identities=21% Similarity=0.443 Sum_probs=17.3
Q ss_pred hccCCCEEEEEEcC----ceecCCCCCcccCcceEE
Q 047565 33 TYKIGDYVDVKVNG----AVHKGMPHKFYHGRTGRV 64 (106)
Q Consensus 33 ~yk~GD~VdIkid~----svqKGMPHk~YHGkTG~V 64 (106)
.|++||+|.|.-.. ..-+|+ ..|++|-|
T Consensus 23 s~~~Gd~v~Vl~~~~~~~~w~~~~----~~g~~G~~ 54 (93)
T d1uffa_ 23 SFNSGDIIQVDEKTVGEPGWLYGS----FQGNFGWF 54 (93)
T ss_dssp CBCTTCEEEECSSCCCSSSEEEEE----ETTEEEEE
T ss_pred cCcCCCEEEEEEeccCCCCEEEEE----eCCcEEEE
Confidence 48999999997433 234442 35666543
No 21
>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.09 E-value=15 Score=21.93 Aligned_cols=28 Identities=21% Similarity=0.378 Sum_probs=19.1
Q ss_pred hccCCCEEEEE--EcCceecCCCCCcccCcceEE
Q 047565 33 TYKIGDYVDVK--VNGAVHKGMPHKFYHGRTGRV 64 (106)
Q Consensus 33 ~yk~GD~VdIk--id~svqKGMPHk~YHGkTG~V 64 (106)
.|++||+|.|. .|.-.-.|. .+|++|-|
T Consensus 52 sf~~Gd~i~Vl~~~~~gWw~g~----~~g~~G~~ 81 (98)
T d1udla_ 52 SFSKGQLINVMNKDDPDWWQGE----INGVTGLF 81 (98)
T ss_dssp CCCTTCEEEECBCCSSSEEBCB----SSSCBCCE
T ss_pred eEcCCCEEEEeEecCCCeEEEE----ECCeEEEE
Confidence 47899999984 345566663 47777744
No 22
>d1jb9a1 b.43.4.2 (A:6-162) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Maize (Zea mays), root isoform [TaxId: 4577]}
Probab=29.30 E-value=17 Score=24.12 Aligned_cols=20 Identities=25% Similarity=0.311 Sum_probs=17.2
Q ss_pred hHHHHHhccCCCEEEEEEcC
Q 047565 27 LSTYLRTYKIGDYVDVKVNG 46 (106)
Q Consensus 27 ls~~l~~yk~GD~VdIkid~ 46 (106)
-|.||.+.++||.|.|.+-.
T Consensus 129 cS~yL~~lk~Gd~V~i~gp~ 148 (157)
T d1jb9a1 129 CSNFLCNSKPGDKIQLTGPS 148 (157)
T ss_dssp HHHHHHTCCTTCEEEEEEEE
T ss_pred eehhhccCCCcCEEEEEecC
Confidence 58999999999999997643
No 23
>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.13 E-value=19 Score=20.05 Aligned_cols=30 Identities=17% Similarity=0.178 Sum_probs=17.5
Q ss_pred hccCCCEEEEEEcCceecCCCCCcccCcceEE
Q 047565 33 TYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRV 64 (106)
Q Consensus 33 ~yk~GD~VdIkid~svqKGMPHk~YHGkTG~V 64 (106)
.|+.||+|.|.-... .|.=.-...|++|-|
T Consensus 23 sf~~Gd~i~vl~~~~--~~Ww~g~~~g~~G~~ 52 (62)
T d1k4us_ 23 EFQEGDIILVLSKVN--EEWLEGESKGKVGIF 52 (62)
T ss_dssp CBCSSCEEEEEEESS--SSCEEEECSSCEEEE
T ss_pred CCCCCCEEEEeEEcC--CCEEEEEECCcEEEE
Confidence 589999999864332 232222346776644
No 24
>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.92 E-value=14 Score=22.70 Aligned_cols=27 Identities=19% Similarity=0.040 Sum_probs=16.6
Q ss_pred hccCCCEEEEE--EcCceecCCCCCcccCcceE
Q 047565 33 TYKIGDYVDVK--VNGAVHKGMPHKFYHGRTGR 63 (106)
Q Consensus 33 ~yk~GD~VdIk--id~svqKGMPHk~YHGkTG~ 63 (106)
.|++||+|.|. .+.....|. ..|++|-
T Consensus 32 s~~~Gd~i~Vl~~~~~gWw~g~----~~g~~G~ 60 (118)
T d1ng2a2 32 SLLEGEAVEVIHKLLDGWWVIR----KDDVTGY 60 (118)
T ss_dssp CBCTTCEEEEEECCTTSEEEEE----ETTEEEE
T ss_pred cCCCCCEEEEeEecCCCeEEEE----ECCeEEE
Confidence 58999999994 233344443 3465553
No 25
>d1gvha2 b.43.4.2 (A:147-253) Flavohemoglobin, central domain {Escherichia coli [TaxId: 562]}
Probab=26.97 E-value=23 Score=20.83 Aligned_cols=19 Identities=26% Similarity=0.504 Sum_probs=16.2
Q ss_pred chHHHHH-hccCCCEEEEEE
Q 047565 26 PLSTYLR-TYKIGDYVDVKV 44 (106)
Q Consensus 26 ~ls~~l~-~yk~GD~VdIki 44 (106)
..|.+|. ..++||.|.|.+
T Consensus 82 ~~S~~l~~~l~~Gd~v~v~g 101 (107)
T d1gvha2 82 QVSNWLHNHANVGDVVKLVA 101 (107)
T ss_dssp HHHHHHHHTCCTTCEEEEEE
T ss_pred chhHHHHhcCCCCCEEEEeC
Confidence 3789995 799999999975
No 26
>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.98 E-value=21 Score=19.30 Aligned_cols=27 Identities=19% Similarity=-0.026 Sum_probs=16.2
Q ss_pred hccCCCEEEEEE--cCceecCCCCCcccCcceE
Q 047565 33 TYKIGDYVDVKV--NGAVHKGMPHKFYHGRTGR 63 (106)
Q Consensus 33 ~yk~GD~VdIki--d~svqKGMPHk~YHGkTG~ 63 (106)
.|++||+|.|.- ++-.-.| +++|+.|-
T Consensus 18 s~~~Gd~v~vl~~~~~gWw~g----~~~g~~G~ 46 (53)
T d1wlpb1 18 SLLEGEAVEVIHKLLDGWWVI----RKDDVTGY 46 (53)
T ss_dssp CBCTTCEEEEEECCTTSSEEE----ESSSCEEE
T ss_pred cCCCCCEEEEEeecCCceEEE----EECCcEeE
Confidence 489999998862 3333444 24555553
No 27
>d1ty0a1 b.40.2.2 (A:4-99) Streptococcal pyrogenic exotoxin Spe-J {Streptococcus pyogenes [TaxId: 1314]}
Probab=24.59 E-value=21 Score=22.73 Aligned_cols=17 Identities=6% Similarity=-0.072 Sum_probs=14.0
Q ss_pred HHhccCCCEEEEEEcCc
Q 047565 31 LRTYKIGDYVDVKVNGA 47 (106)
Q Consensus 31 l~~yk~GD~VdIkid~s 47 (106)
-+.|+.||+|+|-+-|-
T Consensus 58 t~~F~kgdkVdVFglpy 74 (96)
T d1ty0a1 58 TTKFTKNQKVNIFGLPY 74 (96)
T ss_dssp GGGSCTTCEEEEEECCC
T ss_pred hhhcccCCEeEEEecee
Confidence 57899999999976554
No 28
>d1u0la1 b.40.4.5 (A:3-68) Probable GTPase EngC (YjeQ), N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=24.56 E-value=43 Score=18.96 Aligned_cols=11 Identities=27% Similarity=0.398 Sum_probs=8.6
Q ss_pred ccCCCEEEEEE
Q 047565 34 YKIGDYVDVKV 44 (106)
Q Consensus 34 yk~GD~VdIki 44 (106)
--+||.|.+..
T Consensus 41 ~~VGD~V~~~~ 51 (66)
T d1u0la1 41 IYVGDRVEYTP 51 (66)
T ss_dssp CCTTCEEEEEC
T ss_pred cccCCEEEEEE
Confidence 34799999964
No 29
>d1jb0e_ b.34.4.2 (E:) Photosystem I accessory protein E (PsaE) {Synechococcus elongatus [TaxId: 32046]}
Probab=24.54 E-value=32 Score=20.69 Aligned_cols=28 Identities=21% Similarity=0.418 Sum_probs=23.9
Q ss_pred cCCCEEEEEEcCceecCCCCCcccCcceEEEcccCC
Q 047565 35 KIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 70 (106)
Q Consensus 35 k~GD~VdIkid~svqKGMPHk~YHGkTG~V~~v~~~ 70 (106)
+.||+|-|+ .|-.++...+|.|.+|.+.
T Consensus 2 ~RGskVrIl--------R~ESYWyn~vGtVasvd~~ 29 (69)
T d1jb0e_ 2 QRGSKVKIL--------RPESYWYNEVGTVASVDQT 29 (69)
T ss_dssp CTTCEEEEC--------CTTCTTBTCEEEEEEECCC
T ss_pred CCCCEEEEc--------cccceeecCcceEEEEeCC
Confidence 578898885 5888999999999999876
No 30
>d1fcda2 c.3.1.5 (A:115-255) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}
Probab=24.10 E-value=29 Score=21.95 Aligned_cols=26 Identities=19% Similarity=0.183 Sum_probs=18.7
Q ss_pred chHHHHHhccCCCEEEEEEcCceecCCCCCc
Q 047565 26 PLSTYLRTYKIGDYVDVKVNGAVHKGMPHKF 56 (106)
Q Consensus 26 ~ls~~l~~yk~GD~VdIkid~svqKGMPHk~ 56 (106)
-|...|+.|+.|-.|.+.+.+ +|+||
T Consensus 22 ~L~~~l~~~~~Gg~vv~t~p~-----~P~kC 47 (141)
T d1fcda2 22 ILRKQLEDMADGGTVVIAPPA-----APFRC 47 (141)
T ss_dssp HHHHHHHHSCTTCCEEEECCC-----SSCSS
T ss_pred HHHHHHHhcccCCeEEEecCC-----CCccC
Confidence 456778999999888775544 56665
No 31
>d1krha1 b.43.4.2 (A:106-205) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]}
Probab=23.56 E-value=26 Score=20.26 Aligned_cols=19 Identities=32% Similarity=0.427 Sum_probs=15.6
Q ss_pred chHHHHH-hccCCCEEEEEE
Q 047565 26 PLSTYLR-TYKIGDYVDVKV 44 (106)
Q Consensus 26 ~ls~~l~-~yk~GD~VdIki 44 (106)
..|.+|. ..++||.|.|.+
T Consensus 75 ~~s~~l~~~l~~Gd~v~v~g 94 (100)
T d1krha1 75 KMSEYLSVQAKAGDKMSFTG 94 (100)
T ss_dssp HHHHHHHTTCCTTCEEEEEE
T ss_pred chhhhhhccCCCCCEEEEec
Confidence 3688885 589999999975
No 32
>d1cqxa2 b.43.4.2 (A:151-261) Flavohemoglobin, central domain {Alcaligenes eutrophus [TaxId: 106590]}
Probab=23.01 E-value=21 Score=21.16 Aligned_cols=19 Identities=26% Similarity=0.413 Sum_probs=15.7
Q ss_pred chHHHHH-hccCCCEEEEEE
Q 047565 26 PLSTYLR-TYKIGDYVDVKV 44 (106)
Q Consensus 26 ~ls~~l~-~yk~GD~VdIki 44 (106)
.+|.+|. ..++||.|.+.+
T Consensus 85 ~~S~~l~~~l~~Gd~v~v~g 104 (111)
T d1cqxa2 85 YVSNLLHDHVNVGDQVKLAA 104 (111)
T ss_dssp HHHHHHHHHCCTTCEEEECC
T ss_pred hhHHHHHhcCCCCCEEEEEc
Confidence 4688995 689999999964
No 33
>d2f23a2 d.26.1.2 (A:78-156) GreA transcript cleavage factor, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=22.70 E-value=36 Score=19.70 Aligned_cols=23 Identities=17% Similarity=0.356 Sum_probs=20.4
Q ss_pred CchHHHHHhccCCCEEEEEEcCc
Q 047565 25 IPLSTYLRTYKIGDYVDVKVNGA 47 (106)
Q Consensus 25 ~~ls~~l~~yk~GD~VdIkid~s 47 (106)
+|+.+.|--.++||.|.+.....
T Consensus 46 SPlG~ALlGk~~Gd~v~v~~p~g 68 (79)
T d2f23a2 46 SPMGKALLGHRVGDVLSLDTPKG 68 (79)
T ss_dssp SHHHHHHTTCCTTCEEEEEETTE
T ss_pred CHHHHHHhCCCCCCEEEEEcCCC
Confidence 58999999999999999987664
No 34
>d1a8pa1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Azotobacter vinelandii [TaxId: 354]}
Probab=22.45 E-value=21 Score=21.27 Aligned_cols=18 Identities=39% Similarity=0.545 Sum_probs=15.8
Q ss_pred chHHHHHhccCCCEEEEE
Q 047565 26 PLSTYLRTYKIGDYVDVK 43 (106)
Q Consensus 26 ~ls~~l~~yk~GD~VdIk 43 (106)
.+|.+|...++||.|.|-
T Consensus 74 ~~S~~L~~l~~Gd~v~v~ 91 (99)
T d1a8pa1 74 PLTSRLQHLKEGDELMVS 91 (99)
T ss_dssp SSHHHHTTCCTTCEEEEE
T ss_pred ChhHHHHhCCCCCEEEEC
Confidence 578899999999999883
No 35
>d2vgba1 b.58.1.1 (A:160-261) Pyruvate kinase (PK) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.90 E-value=70 Score=18.82 Aligned_cols=38 Identities=11% Similarity=0.272 Sum_probs=27.9
Q ss_pred HHHHHhccCCCEEEEEEcCceecCCCCCcccCcceEEEcccCCEEEEEEec
Q 047565 28 STYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINK 78 (106)
Q Consensus 28 s~~l~~yk~GD~VdIkid~svqKGMPHk~YHGkTG~V~~v~~~AvgV~VnK 78 (106)
..++...++||.|.|. |+.++ .+|..+.+..+..+|..
T Consensus 46 ~~l~~~v~~G~~IliD-DG~i~------------l~V~~v~~~~i~~~v~~ 83 (102)
T d2vgba1 46 PNIVRVVPVGGRIYID-DGLIS------------LVVQKIGPEGLVTQVEN 83 (102)
T ss_dssp TTHHHHSCTTCEEEET-TTTEE------------EEEEEECSSEEEEEEEE
T ss_pred HHHhhhcCCCCEEEEc-CCceE------------EEEEecCCCEEEEEEEe
Confidence 4677888888888885 77665 67788888877666643
No 36
>d2zjrr1 b.34.5.1 (R:4-113) Ribosomal proteins L24 (L24p) {Deinococcus radiodurans [TaxId: 1299]}
Probab=21.75 E-value=27 Score=22.23 Aligned_cols=33 Identities=36% Similarity=0.415 Sum_probs=22.8
Q ss_pred ccCCCEEEEEEcCceecCCCCCcccCcceEEEcccCCEEEEEE
Q 047565 34 YKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEI 76 (106)
Q Consensus 34 yk~GD~VdIkid~svqKGMPHk~YHGkTG~V~~v~~~AvgV~V 76 (106)
++.||.|-|.- | .+-|++|.|..|.+..--|.|
T Consensus 13 ikkGD~V~Vis------G----kdKGk~G~Vl~V~~~~~~ViV 45 (110)
T d2zjrr1 13 FKKGDTVIVLS------G----KHKGQTGKVLLALPRDQKVVV 45 (110)
T ss_dssp SCTTSEEECCS------S----SSTTCEEEEEEEETTTTEEEE
T ss_pred eeCCCEEEEee------c----CCCCcceEEEEEECCCCEEEE
Confidence 57899998732 2 246899999999755444443
No 37
>d1vqoo1 c.12.1.1 (O:1-115) Ribosomal protein L18e {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=21.28 E-value=24 Score=22.79 Aligned_cols=29 Identities=21% Similarity=0.200 Sum_probs=23.9
Q ss_pred ccCCcccCCCCCchHHHHHhccCCCEEEE
Q 047565 14 LFARPFRKKGYIPLSTYLRTYKIGDYVDV 42 (106)
Q Consensus 14 ~fsk~fR~~G~~~ls~~l~~yk~GD~VdI 42 (106)
.|+++-|.+-..+|++.-+..+.||.|.+
T Consensus 32 rL~~~rr~r~~VnLski~~~~k~~~~vvv 60 (115)
T d1vqoo1 32 RLEKPRRTHAEVNLGRIERYAQEDETVVV 60 (115)
T ss_dssp HHHSCGGGSEEEEHHHHHHHCCTTSEEEE
T ss_pred HHhcccccCCCccHHHHHHhccCCCEEEE
Confidence 46677777777789999999999999855
No 38
>d1v76a_ b.137.1.1 (A:) Hypothetical protein PH1771 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=21.12 E-value=62 Score=19.49 Aligned_cols=43 Identities=19% Similarity=0.221 Sum_probs=29.9
Q ss_pred CCCcccCcceEEEcccCCEEEEEEeceeCceeceeecceeeEEeeecCc
Q 047565 53 PHKFYHGRTGRVWNVTKRAIGVEINKQVKFFMPFLFDSFRCIYLCELPD 101 (106)
Q Consensus 53 PHk~YHGkTG~V~~v~~~AvgV~VnK~V~gk~~~~~~~~~~~~~~~~~~ 101 (106)
+.+.+-|..|.|..=|++.+.|+- ++ .+.+ ----|++.-++||
T Consensus 24 ~~pslvGi~GiVv~ETk~t~~I~t-~~--~~~I---pK~~~vF~f~~~~ 66 (92)
T d1v76a_ 24 THPAFVGIEGYVIDETRNMLVIAG-DR--IWKV---PKDVSIFEFEADD 66 (92)
T ss_dssp SSGGGTTCEEEEEEECSSEEEEES-SS--EEEE---ESTTEEEEEECTT
T ss_pred CCCCccCcEEEEEEeccceEEEEc-CC--eEEE---ecCCeEEEEEECC
Confidence 567899999999999999997754 32 2332 2234566666766
No 39
>d1xjva2 b.40.4.3 (A:149-299) Protection of telomeres protein 1, Pot1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.05 E-value=11 Score=25.38 Aligned_cols=39 Identities=15% Similarity=0.281 Sum_probs=25.7
Q ss_pred HHHHHhccCCCEEEEEEc-------CceecCCCCCcccCcceEEEc
Q 047565 28 STYLRTYKIGDYVDVKVN-------GAVHKGMPHKFYHGRTGRVWN 66 (106)
Q Consensus 28 s~~l~~yk~GD~VdIkid-------~svqKGMPHk~YHGkTG~V~~ 66 (106)
..++++.|+||+|.|.=- ++.+.+.||--+|.-.|..|+
T Consensus 79 ~~~ar~lK~GdfV~l~NVh~k~~~~~~~~~~~l~le~hlhgg~~y~ 124 (151)
T d1xjva2 79 VHVARSLKVGSFLRIYSLHTKLQSMNSENQTMLSLEFHLHGGTSYG 124 (151)
T ss_dssp HHHHHHCCTTCEEEEEEEEEEEEEECTTSCEEEEEEEEECSSCGGG
T ss_pred HHHHhhCCCCCEEEEEEEEEEeccCCCccCCcceEEEEEcCCcccC
Confidence 356788999999877422 123334578888877776444
No 40
>d1an8a1 b.40.2.2 (A:3-95) Streptococcal superantigen Spe-C {Streptococcus pyogenes [TaxId: 1314]}
Probab=20.63 E-value=27 Score=22.13 Aligned_cols=20 Identities=25% Similarity=0.057 Sum_probs=15.6
Q ss_pred HHHHhccCCCEEEEEEcCce
Q 047565 29 TYLRTYKIGDYVDVKVNGAV 48 (106)
Q Consensus 29 ~~l~~yk~GD~VdIkid~sv 48 (106)
-.-+.|+.||+|+|-+-|-.
T Consensus 56 ~~t~~F~kgdkV~VFglpY~ 75 (93)
T d1an8a1 56 EASQKFKRDDHVDVFGLFYI 75 (93)
T ss_dssp HHHTTCCTTCEEEEEECCSC
T ss_pred hhhhccccCCEEEEEeceee
Confidence 34678999999999776633
No 41
>d1tvca1 b.43.4.2 (A:2-110) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]}
Probab=20.50 E-value=47 Score=19.60 Aligned_cols=19 Identities=32% Similarity=0.545 Sum_probs=15.5
Q ss_pred chHHHH-HhccCCCEEEEEE
Q 047565 26 PLSTYL-RTYKIGDYVDVKV 44 (106)
Q Consensus 26 ~ls~~l-~~yk~GD~VdIki 44 (106)
..|.+| +..++||.|.|.+
T Consensus 86 ~~S~~l~~~l~~Gd~v~i~g 105 (109)
T d1tvca1 86 RFSDYLRNDARVGQVLSVKG 105 (109)
T ss_dssp SSHHHHHHHSSSSSEEEEEE
T ss_pred hHHHHHHhhCCCCCEEEEeC
Confidence 367888 6799999999865
Done!