BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047567
(121 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SR32|U161_ARATH UPF0161 protein At3g09310 OS=Arabidopsis thaliana GN=At3g09310 PE=2
SV=2
Length = 170
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 43/49 (87%), Positives = 47/49 (95%)
Query: 37 EISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
EISP++PRSCRYVPTCSEYSM+AYKKYGV+KGTVLT WRLCRCNPLG S
Sbjct: 88 EISPVLPRSCRYVPTCSEYSMEAYKKYGVLKGTVLTTWRLCRCNPLGGS 136
>sp|Q11SD8|YIDD_CYTH3 Putative membrane protein insertion efficiency factor
OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469) GN=CHU_2420 PE=3 SV=1
Length = 79
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 19 EFLVNSIKSLKWVLVKTGE--ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRL 76
EF ++K + + VK + ISPL+P +CRY PTCSEY +QA +KYG +KG L R+
Sbjct: 5 EFFTGAVKQVFIIPVKIYQYSISPLLPGACRYTPTCSEYCVQAIEKYGPLKGIWLGTKRI 64
Query: 77 CRCNPLGNS 85
C CNP G S
Sbjct: 65 CSCNPWGGS 73
>sp|B0K5N7|YIDD_THEPX Putative membrane protein insertion efficiency factor
OS=Thermoanaerobacter sp. (strain X514) GN=Teth514_2412
PE=3 SV=1
Length = 69
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 37/45 (82%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
ISP+ PRSCR+ PTCS+YS++A KYG++KG +++ WR+ RCNP
Sbjct: 16 ISPMKPRSCRFYPTCSQYSIEAISKYGLLKGGIMSIWRILRCNPF 60
>sp|B0K8I2|YIDD_THEP3 Putative membrane protein insertion efficiency factor
OS=Thermoanaerobacter pseudethanolicus (strain ATCC
33223 / 39E) GN=Teth39_2293 PE=3 SV=1
Length = 69
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 37/45 (82%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
ISP+ PRSCR+ PTCS+YS++A KYG++KG +++ WR+ RCNP
Sbjct: 16 ISPMKPRSCRFYPTCSQYSIEAISKYGLLKGGIMSIWRILRCNPF 60
>sp|B0T0Z8|YIDD_CAUSK Putative membrane protein insertion efficiency factor
OS=Caulobacter sp. (strain K31) GN=Caul_4526 PE=3 SV=1
Length = 84
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 36/48 (75%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
+SP + R CRY+PTCSEY+ QA K +G +KG+ L R+CRCNPLG S
Sbjct: 19 LSPFIGRQCRYLPTCSEYAAQALKDHGPLKGSWLAVGRICRCNPLGGS 66
>sp|Q8R6K5|YIDD_THETN Putative membrane protein insertion efficiency factor
OS=Thermoanaerobacter tengcongensis (strain DSM 15242 /
JCM 11007 / NBRC 100824 / MB4) GN=TTE2800 PE=3 SV=1
Length = 69
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 37/45 (82%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
ISP+ PR+CR+ PTCS+YS++A KYG++KG +++ WR+ RCNP
Sbjct: 16 ISPMKPRTCRFYPTCSQYSIEAISKYGLLKGGLMSIWRILRCNPF 60
>sp|Q04XE1|YIDD_LEPBL Putative membrane protein insertion efficiency factor
OS=Leptospira borgpetersenii serovar Hardjo-bovis
(strain L550) GN=LBL_2937 PE=3 SV=1
Length = 84
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGN 84
ISPL+P +CR+ PTCSEY++QA+++ G + L+AWR+ RCNPL
Sbjct: 16 ISPLLPPACRFTPTCSEYTIQAFRECGFFQAIQLSAWRILRCNPLSQ 62
>sp|Q04W31|YIDD_LEPBJ Putative membrane protein insertion efficiency factor
OS=Leptospira borgpetersenii serovar Hardjo-bovis
(strain JB197) GN=LBJ_0146 PE=3 SV=1
Length = 84
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGN 84
ISPL+P +CR+ PTCSEY++QA+++ G + L+AWR+ RCNPL
Sbjct: 16 ISPLLPPACRFTPTCSEYTIQAFRECGFFQAIQLSAWRILRCNPLSQ 62
>sp|Q1IV77|YIDD_KORVE Putative membrane protein insertion efficiency factor
OS=Koribacter versatilis (strain Ellin345)
GN=Acid345_0218 PE=3 SV=1
Length = 88
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
ISPL+P SCRYVPTCSEY+M+A +G V+G+VL RL RC+P
Sbjct: 16 ISPLLPVSCRYVPTCSEYAMEAISIHGAVRGSVLALGRLLRCHP 59
>sp|C0QTH8|YIDD_PERMH Putative membrane protein insertion efficiency factor
OS=Persephonella marina (strain DSM 14350 / EX-H1)
GN=PERMA_0195 PE=3 SV=1
Length = 68
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
+SP +P SCRY PTCS Y++Q+ +KYG +KG++ WR+ RCNP
Sbjct: 16 VSPALPNSCRYYPTCSSYAIQSIEKYGALKGSLKAVWRILRCNPF 60
>sp|O50638|YIDD_LEPIN Putative membrane protein insertion efficiency factor
OS=Leptospira interrogans serogroup Icterohaemorrhagiae
serovar Lai (strain 56601) GN=LA_0177 PE=3 SV=1
Length = 74
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
+SPL+P +CR+ PTCSEY+ QA+++YG + L+ WR+ RCNPL
Sbjct: 16 LSPLLPPACRFTPTCSEYAAQAFQEYGFFRALQLSIWRILRCNPL 60
>sp|Q72VY9|YIDD_LEPIC Putative membrane protein insertion efficiency factor
OS=Leptospira interrogans serogroup Icterohaemorrhagiae
serovar copenhageni (strain Fiocruz L1-130)
GN=LIC_10156 PE=3 SV=1
Length = 74
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
+SPL+P +CR+ PTCSEY+ QA+++YG + L+ WR+ RCNPL
Sbjct: 16 LSPLLPPACRFTPTCSEYAAQAFQEYGFFRALQLSIWRILRCNPL 60
>sp|Q1WUC1|YIDD_LACS1 Putative membrane protein insertion efficiency factor
OS=Lactobacillus salivarius (strain UCC118) GN=LSL_0605
PE=3 SV=1
Length = 87
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
ISP+ P +CRY PTCS Y++ A KK+G+VKG ++ +R+ RCNP
Sbjct: 23 ISPMFPPTCRYYPTCSNYAIDAIKKHGIVKGIIMGIFRILRCNPF 67
>sp|A6KZL6|YIDD_BACV8 Putative membrane protein insertion efficiency factor
OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 /
NCTC 11154) GN=BVU_1189 PE=3 SV=1
Length = 73
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 36 GEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
G ISP+ P SCR+VPTCSEY+++A KK+G KG L R+ RC+P G S
Sbjct: 18 GYISPMTPPSCRFVPTCSEYAIEAIKKHGPFKGLYLAVRRILRCHPWGGS 67
>sp|A1KRZ9|YIDD_NEIMF Putative membrane protein insertion efficiency factor
OS=Neisseria meningitidis serogroup C / serotype 2a
(strain ATCC 700532 / FAM18) GN=NMC0317 PE=3 SV=1
Length = 73
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
ISPL+P CRY PTCS+Y+++A KKYG KG L R+ RC+PLG
Sbjct: 20 ISPLIPPRCRYTPTCSQYAVEAVKKYGAFKGGRLAIKRIARCHPLGGH 67
>sp|Q7NJB9|YIDD_GLOVI Putative membrane protein insertion efficiency factor
OS=Gloeobacter violaceus (strain PCC 7421) GN=gsl1913
PE=3 SV=1
Length = 78
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
+SPL P +CRYVPTCSEY+ QA +++GV G L RLCRC+PL
Sbjct: 19 VSPLTPPTCRYVPTCSEYTRQAIERFGVAAGIWLGTKRLCRCHPL 63
>sp|Q28UQ5|YIDD_JANSC Putative membrane protein insertion efficiency factor
OS=Jannaschia sp. (strain CCS1) GN=Jann_0640 PE=3 SV=1
Length = 73
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
ISP++ +CRY PTCS Y+M+A +K+G +KGT L A R+ RC+P G S
Sbjct: 19 ISPMIASNCRYTPTCSSYAMEALRKHGAIKGTWLAARRVSRCHPWGGS 66
>sp|Q10VR4|YIDD_TRIEI Putative membrane protein insertion efficiency factor
OS=Trichodesmium erythraeum (strain IMS101)
GN=Tery_4697 PE=3 SV=1
Length = 72
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 35/44 (79%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
ISP++P SCR+ PTCSEY+M+A +++G+ KGT + R+ RC+P
Sbjct: 16 ISPILPPSCRFQPTCSEYAMEAIERFGIFKGTAMAVMRILRCHP 59
>sp|B0VQP6|YIDD_ACIBS Putative membrane protein insertion efficiency factor
OS=Acinetobacter baumannii (strain SDF) GN=ABSDF3681
PE=3 SV=1
Length = 106
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 37/48 (77%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
ISPL+ CRY+PTCS+Y+++A + +G +KG L++ R+CRC+P G S
Sbjct: 16 ISPLLGPRCRYIPTCSQYALEALQTHGAIKGVWLSSKRICRCHPWGGS 63
>sp|B3WDM3|YIDD_LACCB Putative membrane protein insertion efficiency factor
OS=Lactobacillus casei (strain BL23) GN=LCABL_13930
PE=3 SV=1
Length = 101
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
ISPL+P SCRY PTCS Y +QA +K+G +KG+++ R+ RCNP
Sbjct: 16 ISPLLPPSCRYYPTCSTYMIQALQKHGAIKGSLMGIARILRCNP 59
>sp|Q03A13|YIDD_LACC3 Putative membrane protein insertion efficiency factor
OS=Lactobacillus casei (strain ATCC 334) GN=LSEI_1171
PE=3 SV=1
Length = 101
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
ISPL+P SCRY PTCS Y +QA +K+G +KG+++ R+ RCNP
Sbjct: 16 ISPLLPPSCRYYPTCSTYMIQALQKHGAIKGSLMGIARILRCNP 59
>sp|Q2JQD1|YIDD_SYNJA Putative membrane protein insertion efficiency factor
OS=Synechococcus sp. (strain JA-3-3Ab) GN=CYA_2594 PE=3
SV=1
Length = 100
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 36/44 (81%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
ISPL+P +CRY PTCS+Y+++A ++YG ++G+ L RLCRC+P
Sbjct: 23 ISPLLPPACRYYPTCSQYTLEAVRRYGAIRGSWLGIRRLCRCHP 66
>sp|B0V5R1|YIDD_ACIBY Putative membrane protein insertion efficiency factor
OS=Acinetobacter baumannii (strain AYE) GN=ABAYE3901
PE=3 SV=1
Length = 106
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 37/48 (77%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
ISPL+ CRY+PTCS+Y+++A + +G +KG L++ R+CRC+P G S
Sbjct: 16 ISPLLGPRCRYIPTCSQYALEALQTHGAIKGVWLSSKRICRCHPWGGS 63
>sp|A3M8Z1|YIDD_ACIBT Putative membrane protein insertion efficiency factor
OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC
755) GN=A1S_2982 PE=3 SV=1
Length = 106
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 37/48 (77%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
ISPL+ CRY+PTCS+Y+++A + +G +KG L++ R+CRC+P G S
Sbjct: 16 ISPLLGPRCRYIPTCSQYALEALQTHGAIKGVWLSSKRICRCHPWGGS 63
>sp|B2HZX4|YIDD_ACIBC Putative membrane protein insertion efficiency factor
OS=Acinetobacter baumannii (strain ACICU)
GN=ACICU_00008 PE=3 SV=1
Length = 106
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 37/48 (77%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
ISPL+ CRY+PTCS+Y+++A + +G +KG L++ R+CRC+P G S
Sbjct: 16 ISPLLGPRCRYIPTCSQYALEALQTHGAIKGVWLSSKRICRCHPWGGS 63
>sp|B7IBI0|YIDD_ACIB5 Putative membrane protein insertion efficiency factor
OS=Acinetobacter baumannii (strain AB0057) GN=AB57_0023
PE=3 SV=1
Length = 106
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 37/48 (77%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
ISPL+ CRY+PTCS+Y+++A + +G +KG L++ R+CRC+P G S
Sbjct: 16 ISPLLGPRCRYIPTCSQYALEALQTHGAIKGVWLSSKRICRCHPWGGS 63
>sp|B7H341|YIDD_ACIB3 Putative membrane protein insertion efficiency factor
OS=Acinetobacter baumannii (strain AB307-0294)
GN=ABBFA_003529 PE=3 SV=1
Length = 106
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 37/48 (77%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
ISPL+ CRY+PTCS+Y+++A + +G +KG L++ R+CRC+P G S
Sbjct: 16 ISPLLGPRCRYIPTCSQYALEALQTHGAIKGVWLSSKRICRCHPWGGS 63
>sp|Q6F6K9|YIDD_ACIAD Putative membrane protein insertion efficiency factor
OS=Acinetobacter sp. (strain ADP1) GN=ACIAD3682 PE=3
SV=1
Length = 106
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
ISP++ CRY+PTCS+YS++A +G +KGT L R+CRC+P G S
Sbjct: 16 ISPMLGPRCRYIPTCSQYSLEAIHTHGAMKGTWLAIHRVCRCHPWGGS 63
>sp|B2SE59|YIDD_FRATM Putative membrane protein insertion efficiency factor
OS=Francisella tularensis subsp. mediasiatica (strain
FSC147) GN=FTM_1615 PE=3 SV=1
Length = 82
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGN 84
ISP +P CRY PTCSEY+++A K +G++KG LT RL RC+PL
Sbjct: 22 ISPFIPARCRYYPTCSEYALEALKTHGILKGLYLTTRRLLRCHPLSK 68
>sp|Q2A5M9|YIDD_FRATH Putative membrane protein insertion efficiency factor
OS=Francisella tularensis subsp. holarctica (strain
LVS) GN=FTL_0177 PE=3 SV=1
Length = 82
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGN 84
ISP +P CRY PTCSEY+++A K +G++KG LT RL RC+PL
Sbjct: 22 ISPFIPARCRYYPTCSEYALEALKTHGILKGLYLTTRRLLRCHPLSK 68
>sp|Q82FE1|YIDD_STRAW Putative membrane protein insertion efficiency factor
OS=Streptomyces avermitilis (strain ATCC 31267 / DSM
46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680)
GN=SAV_4313 PE=3 SV=1
Length = 117
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
ISPL+ C+Y P+CS Y QA ++G +KGT LTAWR+ RCNP
Sbjct: 16 ISPLLGPVCKYYPSCSHYGYQAIDRHGAIKGTALTAWRILRCNP 59
>sp|P67303|YIDD_NEIMB Putative membrane protein insertion efficiency factor
OS=Neisseria meningitidis serogroup B (strain MC58)
GN=NMB1906 PE=3 SV=1
Length = 73
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
ISPL+P CRY PTCS+Y+++A KKYG KG L R+ RC+P G
Sbjct: 20 ISPLIPPRCRYTPTCSQYAVEAVKKYGAFKGGRLAIKRIARCHPFGGH 67
>sp|P67302|YIDD_NEIMA Putative membrane protein insertion efficiency factor
OS=Neisseria meningitidis serogroup A / serotype 4A
(strain Z2491) GN=NMA0549 PE=3 SV=1
Length = 73
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
ISPL+P CRY PTCS+Y+++A KKYG KG L R+ RC+P G
Sbjct: 20 ISPLIPPRCRYTPTCSQYAVEAVKKYGAFKGGRLAIKRIARCHPFGGH 67
>sp|A9M153|YIDD_NEIM0 Putative membrane protein insertion efficiency factor
OS=Neisseria meningitidis serogroup C (strain 053442)
GN=NMCC_0314 PE=3 SV=1
Length = 73
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
ISPL+P CRY PTCS+Y+++A KKYG KG L R+ RC+P G
Sbjct: 20 ISPLIPPRCRYTPTCSQYAVEAVKKYGAFKGGRLAIKRIARCHPFGGH 67
>sp|A0Q420|YIDD_FRATN Putative membrane protein insertion efficiency factor
OS=Francisella tularensis subsp. novicida (strain U112)
GN=FTN_0074 PE=3 SV=1
Length = 82
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGN 84
ISP +P CRY PTCSEY+++A K +G++KG LT RL RC+PL
Sbjct: 22 ISPFIPARCRYYPTCSEYALEALKTHGILKGLYLTTRRLLRCHPLSK 68
>sp|Q1AR60|YIDD_RUBXD Putative membrane protein insertion efficiency factor
OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC
16129) GN=Rxyl_3214 PE=3 SV=1
Length = 70
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 35/44 (79%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
+SPL P SCR+ P+CS+Y+++A ++YG +KG + AWR+ RC+P
Sbjct: 17 VSPLFPPSCRFTPSCSQYAVEAVERYGPLKGGAMAAWRVLRCHP 60
>sp|B4RJJ4|YIDD_NEIG2 Putative membrane protein insertion efficiency factor
OS=Neisseria gonorrhoeae (strain NCCP11945) GN=NGK_2660
PE=3 SV=1
Length = 73
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
ISPL+P CRY PTCS+Y+++A KKYG KG L R+ RC+P G
Sbjct: 20 ISPLIPPRCRYTPTCSQYAVEAVKKYGAFKGLRLAIKRIARCHPFGGH 67
>sp|Q5F4W4|YIDD_NEIG1 Putative membrane protein insertion efficiency factor
OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)
GN=NGO2180 PE=3 SV=1
Length = 73
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
ISPL+P CRY PTCS+Y+++A KKYG KG L R+ RC+P G
Sbjct: 20 ISPLIPPRCRYTPTCSQYAVEAVKKYGAFKGLRLAIKRIARCHPFGGH 67
>sp|Q2S3T2|YIDD_SALRD Putative membrane protein insertion efficiency factor
OS=Salinibacter ruber (strain DSM 13855 / M31)
GN=SRU_1017 PE=3 SV=2
Length = 99
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
+SP + R+CR+ PTCS Y++QA+++YG +KG VLT RL RC+P G
Sbjct: 27 LSPHLGRTCRFHPTCSAYAIQAFREYGALKGLVLTVHRLLRCHPWGGH 74
>sp|A6LGE9|YIDD_PARD8 Putative membrane protein insertion efficiency factor
OS=Parabacteroides distasonis (strain ATCC 8503 / DSM
20701 / NCTC 11152) GN=BDI_3056 PE=3 SV=1
Length = 73
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 34/48 (70%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
IS + P SCRY PTCSEY++QA KKYG VKG L R+ RC+P G S
Sbjct: 20 ISLMTPASCRYTPTCSEYAVQALKKYGPVKGLYLAVKRILRCHPWGGS 67
>sp|Q5NI55|YIDD_FRATT Putative membrane protein insertion efficiency factor
OS=Francisella tularensis subsp. tularensis (strain
SCHU S4 / Schu 4) GN=FTT_0234c PE=3 SV=1
Length = 70
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
ISP +P CRY PTCSEY+++A K +G++KG LT RL RC+PL
Sbjct: 10 ISPFIPARCRYYPTCSEYALEALKTHGILKGLYLTTRRLLRCHPL 54
>sp|Q03EL7|YIDD_PEDPA Putative membrane protein insertion efficiency factor
OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w)
GN=PEPE_1314 PE=3 SV=1
Length = 85
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
ISP+ P SCRY PTCS YS+QA K++G +KG ++ R+ RC+P
Sbjct: 16 ISPMFPPSCRYYPTCSNYSLQAIKRFGAIKGGLMGVARILRCHP 59
>sp|C4L2G6|YIDD_EXISA Putative membrane protein insertion efficiency factor
OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b)
GN=EAT1b_2296 PE=3 SV=1
Length = 89
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
Query: 28 LKWVLVKTGE-----ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
+K VLVK + ISPL P +CR+ P+CS Y ++A +K+G VKG+ LTA RL RC P
Sbjct: 1 MKRVLVKGIQGYQRFISPLKPPTCRFYPSCSHYGIEAIEKHGAVKGSYLTARRLIRCQPF 60
>sp|A6LNH3|YIDD_THEM4 Putative membrane protein insertion efficiency factor
OS=Thermosipho melanesiensis (strain BI429 / DSM 12029)
GN=Tmel_1630 PE=3 SV=1
Length = 81
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 32/48 (66%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
ISPL P +C Y PTCSEY+ QA KK+GV KG L R+ RCNPL
Sbjct: 16 ISPLKPPTCIYTPTCSEYTYQAVKKFGVFKGLFLGFKRILRCNPLHEG 63
>sp|Q8EQL0|YIDD_OCEIH Putative membrane protein insertion efficiency factor
OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM
11309 / KCTC 3954 / HTE831) GN=OB1687 PE=3 SV=1
Length = 90
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
ISP P SCR+ PTCSEY ++A K++G KG +LT R+ +C+P
Sbjct: 16 ISPFTPSSCRFYPTCSEYGLEAIKRFGAFKGGILTIKRISKCHPF 60
>sp|B9L0L5|YIDD_THERP Putative membrane protein insertion efficiency factor
OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159
/ P-2) GN=trd_1086 PE=3 SV=1
Length = 69
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
ISP +P +CR+ PTCSEY +A +YG++KG VLT RL RC+P
Sbjct: 16 ISPGLPPACRFYPTCSEYGYEAISRYGIIKGGVLTVRRLLRCHP 59
>sp|O66562|YIDD_AQUAE Putative membrane protein insertion efficiency factor OS=Aquifex
aeolicus (strain VF5) GN=aq_175.1 PE=3 SV=1
Length = 68
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
ISPL P SCRY PTCS Y++ A +KYGV+KG + +R+ RCNP
Sbjct: 16 ISPLYPSSCRYYPTCSTYAIMAVEKYGVLKGLIKAFFRVLRCNPF 60
>sp|A7HLV5|YIDD_FERNB Putative membrane protein insertion efficiency factor
OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM
5306 / Rt17-B1) GN=Fnod_1039 PE=3 SV=1
Length = 85
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
ISPL P +CR+ PTCS Y+ QA +++G++KG +L WR+ RCNP+
Sbjct: 16 ISPLKPPTCRFEPTCSTYTYQAVERFGILKGLLLGFWRVLRCNPI 60
>sp|Q8A2S7|YIDD_BACTN Putative membrane protein insertion efficiency factor
OS=Bacteroides thetaiotaomicron (strain ATCC 29148 /
DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=BT_3228 PE=3
SV=2
Length = 79
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
ISPL P SCR+ PTCS Y+++A KK+G VKG L R+ RC+P G S
Sbjct: 26 ISPLTPPSCRFTPTCSAYAVEAIKKHGPVKGLYLAVRRILRCHPWGGS 73
>sp|B1LBK0|YIDD_THESQ Putative membrane protein insertion efficiency factor
OS=Thermotoga sp. (strain RQ2) GN=TRQ2_1354 PE=3 SV=1
Length = 81
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 34/48 (70%)
Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
ISPL P +CR+ PTCS Y +QA +K+G++KGT L R+ RCNPL
Sbjct: 16 ISPLKPPTCRFTPTCSNYFIQALEKHGLLKGTFLGLRRILRCNPLSKG 63
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.141 0.450
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,796,084
Number of Sequences: 539616
Number of extensions: 1374992
Number of successful extensions: 4246
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3727
Number of HSP's gapped (non-prelim): 520
length of query: 121
length of database: 191,569,459
effective HSP length: 88
effective length of query: 33
effective length of database: 144,083,251
effective search space: 4754747283
effective search space used: 4754747283
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)