BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047568
(128 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 71.6 bits (174), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 21 SSYASSLPPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKM 80
+S LPPGP LP IGN+ Q D SF SK YGP+ ++ G P ++ +
Sbjct: 5 TSSKGKLPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEA 64
Query: 81 AKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPYGAYWREIRK 125
KE L + +FSGR +QR+T GL ++ S G W+EIR+
Sbjct: 65 VKEALIDNGEEFSGRGNSPISQRIT-KGLGII-SSNGKRWKEIRR 107
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 67.8 bits (164), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/106 (38%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 20 TSSYASSLPPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAK 79
TSS LPPGP LP IGN+ Q D S LSK YGP+ +L G +++ +
Sbjct: 5 TSSGRGKLPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYE 64
Query: 80 MAKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPYGAYWREIRK 125
+ KE L +FSGR +R G +VFS G W+EIR+
Sbjct: 65 VVKEALIDLGEEFSGRGHFPLAERAN-RGFGIVFSN-GKRWKEIRR 108
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 67.4 bits (163), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/106 (38%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 20 TSSYASSLPPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAK 79
TSS LPPGP LP IGN+ Q S LSK YGP+ +L G P +++ +
Sbjct: 5 TSSGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYE 64
Query: 80 MAKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPYGAYWREIRK 125
KE L +FSGR +R G +VFS G W+EIR+
Sbjct: 65 AVKEALIDLGEEFSGRGIFPLAERAN-RGFGIVFSN-GKKWKEIRR 108
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 21 SSYASSLPPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKM 80
+S LPPGP P IGN+ Q DA S + S+ YGP+ ++ LG PT+++ +
Sbjct: 5 TSSKGKLPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEA 64
Query: 81 AKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPYGAYWREIRK 125
KE L +F+GR ++ ++++ GL + FS W+E+R+
Sbjct: 65 VKEALVDLGEEFAGRGSVPILEKVS-KGLGIAFS-NAKTWKEMRR 107
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 62.0 bits (149), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 28 PPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKMAKETLKA 87
PPGP LP IGN+ Q S LSK YGP+ +L G P +++ + KE L
Sbjct: 11 PPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALID 70
Query: 88 HDLQFSGRPALVATQRLTYNGLDLVFSPYGAYWREIRK 125
+FSGR +R G +VFS G W+EIR+
Sbjct: 71 LGEEFSGRGIFPLAERAN-RGFGIVFS-NGKKWKEIRR 106
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 20 TSSYASSLPPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAK 79
TSS PPGP G P IG++ PH++ +S++YG ++ +R+G P +++S
Sbjct: 5 TSSKGLKNPPGPWGWPLIGHMLTL-GKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLD 63
Query: 80 MAKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSP-YGAYWREIRKI 126
++ L F GRP L T L NG + FSP G W R++
Sbjct: 64 TIRQALVRQGDDFKGRPDLY-TFTLISNGQSMSFSPDSGPVWAARRRL 110
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 49 HVSFWELSKKYGPLMSLRLGFVPTLIVSSAKMAKETLKAHDLQFSGRPALVATQRLTYNG 108
H +F++L KKYGP+ S+R+G T+IV ++AKE L FSGRP + + N
Sbjct: 32 HNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNR 91
Query: 109 LDLVFSPYGAYWREIRKICV 128
+ F+ GA+W+ R++ +
Sbjct: 92 KGIAFADSGAHWQLHRRLAM 111
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 21 SSYASSLPPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKM 80
+S LPPGP LP +GNL Q D SF L +KYG + ++ LG P +++
Sbjct: 5 TSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 81 AKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPYGAYWREIRKICV 128
+E L FSGR + + + G ++F+ G WR +R+ +
Sbjct: 65 IREALVDQAEAFSGRGKIAVVDPI-FQGYGVIFA-NGERWRALRRFSL 110
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 21 SSYASSLPPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKM 80
+S LPPGP LP +GNL Q D SF L +KYG + ++ LG P +++
Sbjct: 5 TSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 81 AKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPYGAYWREIRKICV 128
+E L FSGR + + + G ++F+ G WR +R+ +
Sbjct: 65 IREALVDQAEAFSGRGKIAVVDPI-FQGYGVIFA-NGERWRALRRFSL 110
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 21 SSYASSLPPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKM 80
+S LPPGP LP +GNL Q D SF L +KYG + ++ LG P +++
Sbjct: 5 TSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 81 AKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPYGAYWREIRKICV 128
+E L FSGR + + + G ++F+ G WR +R+ +
Sbjct: 65 IREALVDQAEAFSGRGKIAVVDPI-FQGYGVIFA-NGERWRALRRFSL 110
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 21 SSYASSLPPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKM 80
+S LPPGP LP +GNL Q D SF L +KYG + ++ LG P +++
Sbjct: 5 TSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 81 AKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPYGAYWREIRKICV 128
+E L FSGR + + + G ++F+ G WR +R+ +
Sbjct: 65 IREALVDQAEAFSGRGKIAVVDPI-FQGYGVIFA-NGERWRALRRFSL 110
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 21 SSYASSLPPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKM 80
+S LPPGP LP +GNL Q D SF L +KYG + ++ LG P +++
Sbjct: 5 TSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 81 AKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPYGAYWREIRKICV 128
+E L FSGR + + + G ++F+ G WR +R+ +
Sbjct: 65 IREALVDQAEAFSGRGKIAVVDPI-FQGYGVIFA-NGERWRALRRFSL 110
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 21 SSYASSLPPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKM 80
+S LPPGP LP IGNL Q + SF L++++GP+ +L +G +++ K
Sbjct: 5 TSSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKA 64
Query: 81 AKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPYGAYWREIRKICV 128
KE L + +FSGR L A G ++F+ G W++IR+ +
Sbjct: 65 VKEALLDYKDEFSGRGDLPAFHAHRDRG--IIFN-NGPTWKDIRRFSL 109
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 21 SSYASSLPPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKM 80
+S LPPGP LPFIGN Q + + + S ++S++YGP+ ++ LG +++
Sbjct: 5 TSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDA 64
Query: 81 AKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPYGAYWREIRKICV 128
+E L +FSGR AT + G +VFS G +++R+ +
Sbjct: 65 VREALVDQAEEFSGR-GEQATFDWVFKGYGVVFSN-GERAKQLRRFSI 110
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 21 SSYASSLPPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKM 80
+S LPPGP LPFIGN Q + + + S ++S++YGP+ ++ LG +++
Sbjct: 5 TSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDA 64
Query: 81 AKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPYGAYWREIRKICV 128
+E L +FSGR AT + G +VFS G +++R+ +
Sbjct: 65 VREALVDQAEEFSGR-GEQATFDWVFKGYGVVFSN-GERAKQLRRFSI 110
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 21 SSYASSLPPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKM 80
+S LPPGP LPFIGN Q + + + S ++S++YGP+ ++ LG +++
Sbjct: 5 TSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDA 64
Query: 81 AKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPYGAYWREIRKICV 128
+E L +FSGR AT + G +VFS G +++R+ +
Sbjct: 65 VREALVDQAEEFSGR-GEQATFDWVFKGYGVVFSN-GERAKQLRRFSI 110
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 21 SSYASSLPPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKM 80
+S LPPGP LPFIGN Q + + + S ++S++YGP+ ++ LG +++
Sbjct: 5 TSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDA 64
Query: 81 AKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPYGAYWREIRKICV 128
+E L +FSGR AT + G +VFS G +++R+ +
Sbjct: 65 VREALVDQAEEFSGR-GEQATFDWVFKGYGVVFSN-GERAKQLRRFSI 110
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 21 SSYASSLPPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKM 80
+S LPPGP LPFIGN Q + + + S ++S++YGP+ ++ LG +++
Sbjct: 5 TSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDA 64
Query: 81 AKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPYGAYWREIRKICV 128
+E L +FSGR AT + G +VFS G +++R+ +
Sbjct: 65 VREALVDQAEEFSGR-GEQATFDWVFKGYGVVFSN-GERAKQLRRFSI 110
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 21 SSYASSLPPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKM 80
+S LPPGP LPFIGN Q + + + S ++S++YGP+ ++ LG +++
Sbjct: 5 TSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDA 64
Query: 81 AKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPYGAYWREIRKICV 128
KE L +FSGR AT + G + FS G +++R+ +
Sbjct: 65 VKEALVDQAEEFSGR-GEQATFDWLFKGYGVAFS-NGERAKQLRRFSI 110
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 28 PPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKMAKETLKA 87
PPGP P IGN H+SF L+++YG + +RLG P ++++ + + L
Sbjct: 11 PPGPFAWPLIGNAAAV-GQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQ 69
Query: 88 HDLQFSGRPALVATQRLTYNGLDLVFSPYGAYWREIRK 125
F+ RP+ A+ R+ G + F Y +W+ R+
Sbjct: 70 QGSAFADRPSF-ASFRVVSGGRSMAFGHYSEHWKVQRR 106
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 28 PPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKMAKETLKA 87
PP P G P +G++ PH++ +S++YG ++ +R+G P L++S ++ L
Sbjct: 18 PPEPWGWPLLGHVLTL-GKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVR 76
Query: 88 HDLQFSGRPALVATQRLTYNGLDLVFS-PYGAYWREIRKIC 127
F GRP L T L +G L FS G W R++
Sbjct: 77 QGDDFKGRPDLY-TSTLITDGQSLTFSTDSGPVWAARRRLA 116
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 39 NLHQFDASK--PHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKMAKETLKAHDLQFSGRP 96
N++ AS PHV + S+ YG + SL LG + T++++ + KE L F+ RP
Sbjct: 25 NIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP 84
Query: 97 ALVATQRLTYNGLDLVFSPYGAYWREIRKICV 128
L ++T G L+ S YG W + R++ V
Sbjct: 85 CLPLFMKMTKMG-GLLNSRYGRGWVDHRRLAV 115
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 39 NLHQFDASK--PHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKMAKETLKAHDLQFSGRP 96
N++ AS PHV + S+ YG + SL LG + T++++ + KE L F+ RP
Sbjct: 25 NIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP 84
Query: 97 ALVATQRLTYNGLDLVFSPYGAYWREIRKICV 128
L ++T G L+ S YG W + R++ V
Sbjct: 85 CLPLFMKMTKMG-GLLNSRYGRGWVDHRRLAV 115
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 52 FWELSKKYGPLMSLRLGFVPTLIVSSAKMAKETLKAHDLQFSGRPALVATQRLTYN--GL 109
F +L +++G + SL+L + P ++++ +E L H + RP + TQ L +
Sbjct: 36 FDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQ 95
Query: 110 DLVFSPYGAYWREIRKICV 128
+ + YG WRE R+ V
Sbjct: 96 GVFLARYGPAWREQRRFSV 114
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 52 FWELSKKYGPLMSLRLGFVPTLIVSSAKMAKETLKAHDLQFSGRPALVATQRLTYN--GL 109
F +L +++G + SL+L + P ++++ +E L H + RP + TQ L +
Sbjct: 36 FDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQ 95
Query: 110 DLVFSPYGAYWREIRKICV 128
+ + YG WRE R+ V
Sbjct: 96 GVFLARYGPAWREQRRFSV 114
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 38 GNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKMAKETLKAHDLQFSGRPA 97
G LH + P + L++K GP+ LRLG ++++S + +E + + F+GRP
Sbjct: 36 GFLHLLQPNLP-IHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQ 94
Query: 98 LVATQRLTYNGLDLVFSPYGAYWREIRKI 126
+ + + ++ D+ Y W+ +K+
Sbjct: 95 IPSYKLVSQRCQDISLGDYSLLWKAHKKL 123
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 39 NLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVSSAKMAKETLKAHDLQFSGRPAL 98
NL Q D SF +KYG + ++ LG P +++ + +E L FSGR +
Sbjct: 23 NLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKI 82
Query: 99 VATQRLTYNGLDLVFSPYGAYWREIRKICV 128
+ G ++F+ G W+ +R+ V
Sbjct: 83 AMVDPF-FRGYGVIFAN-GNRWKVLRRFSV 110
>pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With
Trehalose
pdb|3T7D|B Chain B, Vall From Streptomyces Hygroscopicus In Complex With
Trehalose
Length = 497
Score = 32.7 bits (73), Expect = 0.060, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 69 FVPTLIVSSAKMAKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPYGA--YWREIRK 125
F ++ SSA+ A HD Q G PAL+ QR L V P+ + YWR + K
Sbjct: 138 FADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPK 196
>pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form
pdb|3T5T|B Chain B, Vall From Streptomyces Hygroscopicus In Apo Form
Length = 496
Score = 32.7 bits (73), Expect = 0.060, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 69 FVPTLIVSSAKMAKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPYGA--YWREIRK 125
F ++ SSA+ A HD Q G PAL+ QR L V P+ + YWR + K
Sbjct: 137 FADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPK 195
>pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp
pdb|4F96|A Chain A, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp
pdb|4F97|A Chain A, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Validoxylamine A 7'-Phosphate
pdb|4F97|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Validoxylamine A 7'-Phosphate
pdb|4F9F|A Chain A, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|4F9F|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|4F9F|C Chain C, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|4F9F|D Chain D, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|4F9F|E Chain E, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|4F9F|F Chain F, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|3VDM|A Chain A, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase
Which Catalyzes Non-Glycosidic C-N Coupling In
Validamycin A Biosynthesis
pdb|3VDM|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase
Which Catalyzes Non-Glycosidic C-N Coupling In
Validamycin A Biosynthesis
pdb|3VDN|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp
Length = 497
Score = 32.7 bits (73), Expect = 0.061, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 69 FVPTLIVSSAKMAKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPYGA--YWREIRK 125
F ++ SSA+ A HD Q G PAL+ QR L V P+ + YWR + K
Sbjct: 138 FADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPK 196
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To
An Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To
An Inhibitor Ritonavir
Length = 485
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
Query: 29 PGPKGLPFIGNLHQFDASKPHVSF----WELSKKYGPLMSLRLGFVPTLIVSSAKMAKET 84
PGP LPF+GN+ + H F E KKYG + G P L ++ M K
Sbjct: 17 PGPTPLPFLGNILSY-----HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTV 71
Query: 85 L 85
L
Sbjct: 72 L 72
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human
Cytochrome P450 3a4 And Desthiazolylmethyloxycarbonyl
Ritonavir
Length = 487
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
Query: 29 PGPKGLPFIGNLHQFDASKPHVSF----WELSKKYGPLMSLRLGFVPTLIVSSAKMAKET 84
PGP LPF+GN+ + H F E KKYG + G P L ++ M K
Sbjct: 19 PGPTPLPFLGNILSY-----HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTV 73
Query: 85 L 85
L
Sbjct: 74 L 74
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
Query: 29 PGPKGLPFIGNLHQFDASKPHVSF----WELSKKYGPLMSLRLGFVPTLIVSSAKMAKET 84
PGP LPF+GN+ + H F E KKYG + G P L ++ M K
Sbjct: 18 PGPTPLPFLGNILSY-----HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTV 72
Query: 85 L 85
L
Sbjct: 73 L 73
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 29.3 bits (64), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 29 PGPKGLPFIGNLHQF----DASKPHVSFWELSKKYGPLMSLRLG 68
PGP P +G+L + K H + E KKYG + ++LG
Sbjct: 27 PGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLG 70
>pdb|4A3U|A Chain A, X-Structure Of The Old Yellow Enzyme Homologue From
Zymomonas Mobilis (Ncr)
pdb|4A3U|B Chain B, X-Structure Of The Old Yellow Enzyme Homologue From
Zymomonas Mobilis (Ncr)
Length = 358
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 10/71 (14%)
Query: 17 RHITSSYASSLPPGPKGLPFIGNLHQFDASKPHVSFWELSKKYGPLMSLRLGFVPTLIVS 76
R + S+ + P P G H +D KP Y +LRL +P L+
Sbjct: 104 RMVPSNVSGMQPVAPSASQAPGLGHTYDGKKP----------YDVARALRLDEIPRLLDD 153
Query: 77 SAKMAKETLKA 87
K A+ LKA
Sbjct: 154 YEKAARHALKA 164
>pdb|2CB6|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E195q
pdb|2CB6|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E195q
pdb|2CB6|C Chain C, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E195q
pdb|2CB6|D Chain D, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E195q
pdb|2CB6|E Chain E, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E195q
pdb|2CB6|F Chain F, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E195q
pdb|2CB6|G Chain G, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E195q
pdb|2CB6|H Chain H, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E195q
pdb|2CB6|I Chain I, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E195q
pdb|2CB6|J Chain J, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E195q
pdb|2CB6|K Chain K, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E195q
pdb|2CB6|L Chain L, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E195q
pdb|2CB6|M Chain M, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E195q
pdb|2CB6|N Chain N, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E195q
pdb|2CB6|O Chain O, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E195q
pdb|2CB6|P Chain P, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E195q
Length = 291
Score = 25.4 bits (54), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 68 GFVPTLIVSSAKMAKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPY 116
GF+P + + ++T + L+ + V+T R YN L L +P+
Sbjct: 93 GFIPRVTNQNLSPVEDTHLLNYLRTNSPSIFVSTTRARYNNLGLEITPW 141
>pdb|2CB4|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E197q
pdb|2CB4|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E197q
pdb|2CB4|C Chain C, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E197q
pdb|2CB4|D Chain D, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E197q
pdb|2CB4|E Chain E, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E197q
pdb|2CB4|F Chain F, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E197q
pdb|2CB4|G Chain G, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E197q
pdb|2CB4|H Chain H, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E197q
pdb|2CB4|I Chain I, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E197q
pdb|2CB4|J Chain J, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E197q
pdb|2CB4|K Chain K, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E197q
pdb|2CB4|L Chain L, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E197q
pdb|2CB4|M Chain M, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E197q
pdb|2CB4|N Chain N, Crystal Structure Of The Catalytic Domain Of The
Mosquitocidal Toxin From Bacillus Sphaericus, Mutant
E197q
Length = 291
Score = 25.4 bits (54), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 68 GFVPTLIVSSAKMAKETLKAHDLQFSGRPALVATQRLTYNGLDLVFSPY 116
GF+P + + ++T + L+ + V+T R YN L L +P+
Sbjct: 93 GFIPRVTNQNLSPVEDTHLLNYLRTNSPSIFVSTTRARYNNLGLEITPW 141
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,412,168
Number of Sequences: 62578
Number of extensions: 113676
Number of successful extensions: 344
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 304
Number of HSP's gapped (non-prelim): 38
length of query: 128
length of database: 14,973,337
effective HSP length: 87
effective length of query: 41
effective length of database: 9,529,051
effective search space: 390691091
effective search space used: 390691091
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)