BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047571
(681 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C9I3|PP115_ARATH Pentatricopeptide repeat-containing protein At1g71460,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-A3 PE=2
SV=1
Length = 689
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/645 (64%), Positives = 510/645 (79%), Gaps = 6/645 (0%)
Query: 38 KPESTYFQKRKKYHTKKSAEKDAFPSSLPLHEKNPRAIYKDIQRFARQNKLKEALVILDY 97
+P ++ +K K + E+DAFPSSLPLH KNP I++DIQ FARQN L+ AL ILDY
Sbjct: 47 RPSTSPAKKPKPFR-----ERDAFPSSLPLHSKNPYIIHRDIQIFARQNNLEVALTILDY 101
Query: 98 MDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGS 157
++Q+GIPVN TTF+AL+ ACVR +SL+ G+ +H HIRINGLE+N FLRTKLV MYT+CGS
Sbjct: 102 LEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGS 161
Query: 158 FEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVI 217
+DA+KVFDES+S +VY WNALLRG VI+GKKRY+ VL + +MRELGV LNVY+ S V
Sbjct: 162 VKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVF 221
Query: 218 KSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIV 277
KSFAGASAL QGLKTHAL IKNG + + L+TSL+DMYFKCGK+ LARRVFDE +RDIV
Sbjct: 222 KSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIV 281
Query: 278 VWGSMIAGFAHNRLRWEALDCARWMI-REGIYPNSVVLTILLPVIGEAWARKLGQEVHAY 336
VWG+MIAG AHN+ +WEAL R MI E IYPNSV+LT +LPV+G+ A KLG+EVHA+
Sbjct: 282 VWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAH 341
Query: 337 VLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQ 396
VLK++ Y E+ FV S L+D+YCKC DM S RVFY +++RN I WTALMSGY +NGR +Q
Sbjct: 342 VLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQ 401
Query: 397 ALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMI 456
ALRSI WMQQEGFRPDVVT+ATV+PVC++L+A+ GKEIH YA+KN FLPNVS++TSLM+
Sbjct: 402 ALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMV 461
Query: 457 MYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVA 516
MYSKCGV +Y ++LFD +E RNV +WTAMID +EN L + VFR M LSKHRPDSV
Sbjct: 462 MYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVT 521
Query: 517 MARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVP 576
M R+L+V LKALKLGKE+HG +LKK+F S+PFV+A IKMYG CG L A FDAV
Sbjct: 522 MGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVA 581
Query: 577 VKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACR 636
VKGS+TWTAIIEAYG N+L ++A++ F++M + GFTPN FTF +LSIC+QAGF DEA R
Sbjct: 582 VKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYR 641
Query: 637 IFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRFREMSSSLS 681
FN+M R Y ++ EEHY ++I++L R GR+EEA R MSSS S
Sbjct: 642 FFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRLAVMSSSSS 686
Score = 33.1 bits (74), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEG-RLIHTHIRING 137
I+ + ++A+ + M +G N TF A+++ C + + E R + +R+
Sbjct: 592 IEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYN 651
Query: 138 LENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESV 173
L+ + + ++++ CG E+A+++ SSS S+
Sbjct: 652 LQPSEEHYSLVIELLNRCGRVEEAQRLAVMSSSSSL 687
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 193/598 (32%), Positives = 327/598 (54%), Gaps = 6/598 (1%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
++RF L+ A+ +L + I + T +++ C ++SL +G+ + IR NG
Sbjct: 68 LRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGF 125
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNY 198
+ L +KL MYT+CG ++A +VFDE E WN L+ +G + G + +
Sbjct: 126 VIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD--FSGSIGLF 183
Query: 199 MKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKC 258
KM GV+++ YTFSCV KSF+ ++ G + H ++K+GF + + SL+ Y K
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 243
Query: 259 GKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILL 318
++ AR+VFDE +RD++ W S+I G+ N L + L M+ GI + + +
Sbjct: 244 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 303
Query: 319 PVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNE 378
++ LG+ VH+ +K E+ F ++L+DMY KC D++SA VF E +R+
Sbjct: 304 AGCADSRLISLGRAVHSIGVKACFSREDRFC-NTLLDMYSKCGDLDSAKAVFREMSDRSV 362
Query: 379 ILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAY 438
+ +T++++GY G +A++ M++EG PDV TV V+ C++ + L+ GK +H +
Sbjct: 363 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 422
Query: 439 AVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDA 498
+N ++ + +LM MY+KCG + + +F EM V+++ISW +I +N ++A
Sbjct: 423 IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEA 482
Query: 499 LGVFRSM-QLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIK 557
L +F + + + PD +A +L L A G+EIHG +++ + S VA +
Sbjct: 483 LSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVD 542
Query: 558 MYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFT 617
MY CG L A ++FD + K ++WT +I YG + +EA++LF++MR G + +
Sbjct: 543 MYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 602
Query: 618 FKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRFRE 675
F LL C+ +G DE R FN+M KIE EHY ++D+L R G + +A+RF E
Sbjct: 603 FVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 660
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 325 bits (832), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 209/689 (30%), Positives = 340/689 (49%), Gaps = 33/689 (4%)
Query: 7 LAVSLSL-CVHSFPPN--PISNNHQFFKLKASATKPESTYFQKRKKYHTKKSAEKDAFPS 63
LA + SL + FP P S + + L+A+ T ++ PS
Sbjct: 5 LAFTFSLPSIFPFPSQLLPFSRHKHPYLLRATPTSATEDV-----------ASAVSGAPS 53
Query: 64 SLPLHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSL 123
++P ++ R N L+EA++ M GI + F AL+ A + +
Sbjct: 54 IFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDM 113
Query: 124 VEGRLIHTHIRINGLENNGF-LRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRG 182
G+ IH H+ G + + LV +Y CG F KVFD S + WN+L+
Sbjct: 114 ELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLI-- 171
Query: 183 AVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAG---ASALMQGLKTHALLIKN 239
+ + +++ L + M + V+ + +T V+ + + LM G + HA ++
Sbjct: 172 SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK 231
Query: 240 GFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCA 299
G ++ I+ T L+ MY K GK+ ++ + G RD+V W ++++ N EAL+
Sbjct: 232 GELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYL 290
Query: 300 RWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCK 359
R M+ EG+ P+ ++ +LP + G+E+HAY LKN E FV S+LVDMYC
Sbjct: 291 REMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN 350
Query: 360 CRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQE-GFRPDVVTVAT 418
C+ + S RVF +R LW A+++GY N ++AL M++ G + T+A
Sbjct: 351 CKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 410
Query: 419 VIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRN 478
V+P C + A + + IH + VK + + +LM MYS+ G +D ++++F +ME R+
Sbjct: 411 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRD 470
Query: 479 VISWTAMIDSCIENGRLDDALGVFRSMQ-----LSKH------RPDSVAMARMLSVSGQL 527
+++W MI + + +DAL + MQ +SK +P+S+ + +L L
Sbjct: 471 LVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAAL 530
Query: 528 KALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAII 587
AL GKEIH +K + A+ V + + MY CG L+ ++ VFD +P K ITW II
Sbjct: 531 SALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVII 590
Query: 588 EAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKI 647
AYG + QEA+ L M G PN TF + + C+ +G DE RIF VM Y +
Sbjct: 591 MAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGV 650
Query: 648 EALEEHYLIMIDILTRFGRIEEAHRFREM 676
E +HY ++D+L R GRI+EA++ M
Sbjct: 651 EPSSDHYACVVDLLGRAGRIKEAYQLMNM 679
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 318 bits (815), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 182/571 (31%), Positives = 301/571 (52%), Gaps = 4/571 (0%)
Query: 103 IPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAE 162
IP NV A + R SL E R I + NGL F +TKLV ++ GS ++A
Sbjct: 31 IPANVYEHPAALL-LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAA 89
Query: 163 KVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAG 222
+VF+ S+ ++ +L+G A L +++MR V+ VY F+ ++K
Sbjct: 90 RVFEPIDSKLNVLYHTMLKG--FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGD 147
Query: 223 ASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSM 282
+ L G + H LL+K+GF L T L +MY KC ++ AR+VFD +RD+V W ++
Sbjct: 148 EAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTI 207
Query: 283 IAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNER 342
+AG++ N + AL+ + M E + P+ + + +LP + +G+E+H Y +++
Sbjct: 208 VAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG- 266
Query: 343 YSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIA 402
+ + + ++LVDMY KC + +A ++F ERN + W +++ YV N ++A+
Sbjct: 267 FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQ 326
Query: 403 WMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCG 462
M EG +P V+V + C+ L L G+ IH +V+ NVS++ SL+ MY KC
Sbjct: 327 KMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCK 386
Query: 463 VLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLS 522
+D + +F +++ R ++SW AMI +NGR DAL F M+ +PD+ +++
Sbjct: 387 EVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVIT 446
Query: 523 VSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSIT 582
+L K IHG V++ FV + MY CG + A+L+FD + + T
Sbjct: 447 AIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTT 506
Query: 583 WTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMS 642
W A+I+ YG + + AL LF++M+ G PN TF ++S C+ +G + + F +M
Sbjct: 507 WNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMK 566
Query: 643 RGYKIEALEEHYLIMIDILTRFGRIEEAHRF 673
Y IE +HY M+D+L R GR+ EA F
Sbjct: 567 ENYSIELSMDHYGAMVDLLGRAGRLNEAWDF 597
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/486 (27%), Positives = 229/486 (47%), Gaps = 10/486 (2%)
Query: 66 PLHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVE 125
P+ K + ++ FA+ + L +AL M + V F L+ C L
Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRV 153
Query: 126 GRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVI 185
G+ IH + +G + F T L MY C +A KVFD + WN ++ G
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQ 213
Query: 186 AGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYL 245
G R L M E ++ + T V+ + + + G + H +++GF +
Sbjct: 214 NGMARM--ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLV 271
Query: 246 ILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIRE 305
+ T+L+DMY KCG ++ AR++FD +R++V W SMI + N EA+ + M+ E
Sbjct: 272 NISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE 331
Query: 306 GIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNS 365
G+ P V + L + + G+ +H ++ + V +SL+ MYCKC+++++
Sbjct: 332 GVKPTDVSVMGALHACADLGDLERGRFIHKLSVE-LGLDRNVSVVNSLISMYCKCKEVDT 390
Query: 366 AWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQ 425
A +F + + R + W A++ G+ NGR AL + M+ +PD T +VI ++
Sbjct: 391 AASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE 450
Query: 426 LKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAM 485
L +H K IH +++ NV + T+L+ MY+KCG + + +FD M R+V +W AM
Sbjct: 451 LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAM 510
Query: 486 IDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLS-------VSGQLKALKLGKEIHG 538
ID +G AL +F MQ +P+ V ++S V LK + KE +
Sbjct: 511 IDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYS 570
Query: 539 QVLKKD 544
L D
Sbjct: 571 IELSMD 576
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 197/414 (47%), Gaps = 7/414 (1%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
+ +++ + AL ++ M ++ + + T +++ A R + G+ IH + +G
Sbjct: 208 VAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGF 267
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNY 198
++ + T LV MY CGS E A ++FD +V WN+++ V + ++F
Sbjct: 268 DSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQ- 326
Query: 199 MKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKC 258
KM + GV+ + + + A L +G H L ++ G + + SLI MY KC
Sbjct: 327 -KMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKC 385
Query: 259 GKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILL 318
++ A +F + R +V W +MI GFA N +AL+ M + P++ ++
Sbjct: 386 KEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVI 445
Query: 319 PVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNE 378
I E + +H V+++ + +FV ++LVDMY KC + A +F ER+
Sbjct: 446 TAIAELSITHHAKWIHGVVMRS-CLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHV 504
Query: 379 ILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAY 438
W A++ GY ++G + AL MQ+ +P+ VT +VI CS + G + Y
Sbjct: 505 TTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF-Y 563
Query: 439 AVKNQFLPNVSI--ITSLMIMYSKCGVLDYSLKLFDEMEVRNVIS-WTAMIDSC 489
+K + +S+ +++ + + G L+ + +M V+ ++ + AM+ +C
Sbjct: 564 MMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGAC 617
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 315 bits (808), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 181/609 (29%), Positives = 319/609 (52%), Gaps = 10/609 (1%)
Query: 70 KNPRAIYKDIQRFARQNKLKEALVILDYMDQQG-IPVNVTTFNALITACVRTRSLVEGRL 128
K + I + N +EAL D+ + + + T+ +LI AC +RSL +GR
Sbjct: 29 KTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRK 88
Query: 129 IHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGK 188
IH HI + + + L ++ MY CGS DA +VFD ++ + +++ G G+
Sbjct: 89 IHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQ 148
Query: 189 KRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILR 248
L Y+KM + + + + F +IK+ A +S + G + HA +IK +LI +
Sbjct: 149 GAEAIRL--YLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQ 206
Query: 249 TSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIY 308
+LI MY + ++ A RVF +D++ W S+IAGF+ +EAL + M+ G++
Sbjct: 207 NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVF 266
Query: 309 -PNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAW 367
PN + L G ++H +K+E + SL DMY +C +NSA
Sbjct: 267 HPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI-AGCSLCDMYARCGFLNSAR 325
Query: 368 RVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLK 427
RVF + E + W +++G +NG ++A+ + M+ GF PD +++ +++ C+Q K
Sbjct: 326 RVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL--CAQTK 383
Query: 428 --ALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVR-NVISWTA 484
AL+ G +IH+Y +K FL ++++ SL+ MY+ C L LF++ + +SW
Sbjct: 384 PMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNT 443
Query: 485 MIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKD 544
++ +C+++ + + L +F+ M +S+ PD + M +L ++ +LKLG ++H LK
Sbjct: 444 ILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTG 503
Query: 545 FASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFD 604
A F+ I MY CG L A+ +FD++ + ++W+ +I Y + +EAL LF
Sbjct: 504 LAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFK 563
Query: 605 KMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRF 664
+M++ G PNH TF +L+ C+ G +E +++ M + I +EH ++D+L R
Sbjct: 564 EMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARA 623
Query: 665 GRIEEAHRF 673
GR+ EA RF
Sbjct: 624 GRLNEAERF 632
Score = 176 bits (445), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 137/565 (24%), Positives = 255/565 (45%), Gaps = 42/565 (7%)
Query: 69 EKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRL 128
E+N + I +++ + EA+ + M Q+ + + F ++I AC + + G+
Sbjct: 130 ERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQ 189
Query: 129 IHTHIRINGLENNGFL--RTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIA 186
+H ++ LE++ L + L+ MY DA +VF + + W++++ G
Sbjct: 190 LHA--QVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 187 GKKRYRGVLFNYMKMRELGV-QLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYL 245
G + L + +M GV N Y F +K+ + G + H L IK+
Sbjct: 248 GFEFE--ALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNA 305
Query: 246 ILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIRE 305
I SL DMY +CG + ARRVFD+ D W +IAG A+N EA+ M
Sbjct: 306 IAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365
Query: 306 GIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNS 365
G P+++ L LL + A G ++H+Y++K + +L V +SL+ MY C D+
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK-WGFLADLTVCNSLLTMYTFCSDLYC 424
Query: 366 AWRVFYE-TEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCS 424
+ +F + + + W +++ + + + + LR M PD +T+ ++ C
Sbjct: 425 CFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCV 484
Query: 425 QLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTA 484
++ +L G ++H Y++K P I L+ MY+KCG L + ++FD M+ R+V+SW+
Sbjct: 485 EISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWST 544
Query: 485 MIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKD 544
+I ++G ++AL +F+ M+ + P+ V +L+ + ++ G +++ + +
Sbjct: 545 LIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTE- 603
Query: 545 FASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFD 604
+G+ E V D + G + EA D
Sbjct: 604 --------------HGISPTKEHCSCVVDLLARAGRLN---------------EAERFID 634
Query: 605 KMRNGGFTPNHFTFKVLLSICNQAG 629
+M+ P+ +K LLS C G
Sbjct: 635 EMK---LEPDVVVWKTLLSACKTQG 656
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 314 bits (805), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 180/609 (29%), Positives = 314/609 (51%), Gaps = 6/609 (0%)
Query: 65 LPLHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLV 124
L L + R I F R L +AL M G+ +V+TF L+ ACV ++
Sbjct: 96 LDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK 155
Query: 125 EGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAV 184
+ + G++ N F+ + L+K Y G + K+FD + WN +L G
Sbjct: 156 GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYA 215
Query: 185 IAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDY 244
G V+ + MR + N TF CV+ A + G++ H L++ +G VD+
Sbjct: 216 KCGA--LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG-VDF 272
Query: 245 L-ILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMI 303
++ SL+ MY KCG+ A ++F D V W MI+G+ + L E+L MI
Sbjct: 273 EGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMI 332
Query: 304 REGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDM 363
G+ P+++ + LLP + + + +++H Y++++ S ++F+ S+L+D Y KCR +
Sbjct: 333 SSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS-ISLDIFLTSALIDAYFKCRGV 391
Query: 364 NSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVC 423
+ A +F + + +++TA++SGY+ NG +L W+ + P+ +T+ +++PV
Sbjct: 392 SMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVI 451
Query: 424 SQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWT 483
L AL G+E+H + +K F +I +++ MY+KCG ++ + ++F+ + R+++SW
Sbjct: 452 GILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWN 511
Query: 484 AMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKK 543
+MI C ++ A+ +FR M +S D V+++ LS L + GK IHG ++K
Sbjct: 512 SMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKH 571
Query: 544 DFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLF 603
AS + + I MY CG L+ A VF + K ++W +II A G + +++L LF
Sbjct: 572 SLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLF 631
Query: 604 DKM-RNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILT 662
+M G P+ TF ++S C G DE R F M+ Y I+ +EHY ++D+
Sbjct: 632 HEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFG 691
Query: 663 RFGRIEEAH 671
R GR+ EA+
Sbjct: 692 RAGRLTEAY 700
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/521 (27%), Positives = 255/521 (48%), Gaps = 17/521 (3%)
Query: 113 LITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFD--ESSS 170
L+ AC L +G+ +H + +N + + + +++ MY CGSF D K+F +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 171 ESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKS------FAGAS 224
S+ PWN+++ V G L Y KM GV +V TF C++K+ F G
Sbjct: 101 SSIRPWNSIISSFVRNG--LLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGID 158
Query: 225 ALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIA 284
L + + + N FV +SLI Y + GKI + ++FD +D V+W M+
Sbjct: 159 FLSDTVSSLGMDC-NEFV-----ASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLN 212
Query: 285 GFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYS 344
G+A + M + I PN+V +L V LG ++H V+ +
Sbjct: 213 GYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG-VD 271
Query: 345 EELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWM 404
E +++SL+ MY KC + A ++F + + W ++SGYV +G +E++L M
Sbjct: 272 FEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEM 331
Query: 405 QQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVL 464
G PD +T ++++P S+ + L + K+IH Y +++ ++ + ++L+ Y KC +
Sbjct: 332 ISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGV 391
Query: 465 DYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVS 524
+ +F + +V+ +TAMI + NG D+L +FR + K P+ + + +L V
Sbjct: 392 SMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVI 451
Query: 525 GQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWT 584
G L ALKLG+E+HG ++KK F + + I MY CG + A +F+ + + ++W
Sbjct: 452 GILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWN 511
Query: 585 AIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSIC 625
++I +D A+ +F +M G + + LS C
Sbjct: 512 SMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC 552
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 190/414 (45%), Gaps = 3/414 (0%)
Query: 213 FSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETG 272
S ++++ + + L QG + HA LI N ++ MY CG ++F
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 273 DR--DIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLG 330
R I W S+I+ F N L +AL M+ G+ P+ L+ A G
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC-VALKNFKG 156
Query: 331 QEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVS 390
+ + + + FV SSL+ Y + ++ ++F +++ ++W +++GY
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 391 NGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSI 450
G L+ ++ + M+ + P+ VT V+ VC+ ++ G ++H V + SI
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 451 ITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKH 510
SL+ MYSKCG D + KLF M + ++W MI +++G ++++L F M S
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 511 RPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKL 570
PD++ + +L + + L+ K+IH +++ + F+ + I Y C + A+
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN 396
Query: 571 VFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSI 624
+F + +TA+I Y +N L ++L +F + +PN T +L +
Sbjct: 397 IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV 450
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 6/266 (2%)
Query: 416 VATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEME 475
++ ++ CS L GK++HA+ + N + ++ MY+ CG K+F ++
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 476 VR--NVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLG 533
+R ++ W ++I S + NG L+ AL + M PD ++ LK K
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 534 KEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYN 593
+ V FVA+ IK Y G ++ +FD V K + W ++ Y
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 594 DLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFN-VMSRGYKIEALEE 652
+ F MR +PN TF +LS+C D ++ V+ G E +
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 653 HYLIMIDILTRFGRIEEAHR-FREMS 677
+ L + + ++ GR ++A + FR MS
Sbjct: 278 NSL--LSMYSKCGRFDDASKLFRMMS 301
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 308 bits (790), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 177/574 (30%), Positives = 299/574 (52%), Gaps = 10/574 (1%)
Query: 106 NVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVF 165
+V + +L+ T+S+ + + +H H+ I G +G + + L Y CG A K+F
Sbjct: 14 SVKQYQSLLNHFAATQSISKTKALHCHV-ITGGRVSGHILSTLSVTYALCGHITYARKLF 72
Query: 166 DESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQL--NVYTFSCVIKSFAGA 223
+E S+ +N ++R V G Y + +++M GV+ + YT+ V K+
Sbjct: 73 EEMPQSSLLSYNIVIRMYVREG--LYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGEL 130
Query: 224 SALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMI 283
++ GL H ++++ F ++ +L+ MY GK+++AR VFD +RD++ W +MI
Sbjct: 131 KSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMI 190
Query: 284 AGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERY 343
+G+ N +AL WM+ E + + + +LPV G ++G+ VH V + +R
Sbjct: 191 SGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV-EEKRL 249
Query: 344 SEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAW 403
+++ V+++LV+MY KC M+ A VF E R+ I WT +++GY +G +E AL
Sbjct: 250 GDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRL 309
Query: 404 MQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGV 463
MQ EG RP+ VT+A+++ VC +N GK +H +AV+ Q ++ I TSL+ MY+KC
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369
Query: 464 LDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSV 523
+D ++F + W+A+I C++N + DALG+F+ M+ P+ + +L
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Query: 524 SGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAV----PVKG 579
L L+ IH + K F S A + +Y CG LE A +F+ + K
Sbjct: 430 YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKD 489
Query: 580 SITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFN 639
+ W A+I YG + AL +F +M G TPN TF L+ C+ +G +E +F
Sbjct: 490 VVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFR 549
Query: 640 VMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRF 673
M YK A HY ++D+L R GR++EA+
Sbjct: 550 FMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNL 583
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 207/463 (44%), Gaps = 15/463 (3%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
I + R + +AL++ D+M + + ++ T +++ C + L GR +H + L
Sbjct: 190 ISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRL 249
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNY 198
+ ++ LV MY CG ++A VFD V W ++ G G L
Sbjct: 250 GDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRL 309
Query: 199 MKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKC 258
M+ GV+ N T + ++ A + G H ++ +I+ TSLI MY KC
Sbjct: 310 MQFE--GVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKC 367
Query: 259 GKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILL 318
++ L RVF W ++IAG N L +AL + M RE + PN L LL
Sbjct: 368 KRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLL 427
Query: 319 PVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNE 378
P + +H Y+ K + L + LV +Y KC + SA ++F +E+++
Sbjct: 428 PAYAALADLRQAMNIHCYLTKTG-FMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHK 486
Query: 379 ----ILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKE 434
+LW AL+SGY +G AL+ M + G P+ +T + + CS + G
Sbjct: 487 SKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLT 546
Query: 435 IHAYAVKN-QFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVIS-WTAMIDSCIEN 492
+ + +++ + L + T ++ + + G LD + L + + W A++ +C+ +
Sbjct: 547 LFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTH 606
Query: 493 GRLDDALGVFRSMQLSKHRPDS----VAMARMLSVSGQLKALK 531
+ LG + +L + P++ V +A + + G+ K ++
Sbjct: 607 ENVQ--LGEMAANKLFELEPENTGNYVLLANIYAALGRWKDME 647
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 304 bits (778), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/531 (32%), Positives = 290/531 (54%), Gaps = 7/531 (1%)
Query: 146 TKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELG 205
T+ ++ + EDA ++FDE + + WN +++G G Y + Y +M G
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCG--LYIEAVQFYSRMVFAG 125
Query: 206 VQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLAR 265
V+ + +T+ VIKS AG S+L +G K HA++IK GFV + + SLI +Y K G A
Sbjct: 126 VKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAE 185
Query: 266 RVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAW 325
+VF+E +RDIV W SMI+G+ + +L + M++ G P+ L +
Sbjct: 186 KVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVY 245
Query: 326 ARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALM 385
+ K+G+E+H + +++ + ++ V +S++DMY K +++ A R+F +RN + W ++
Sbjct: 246 SPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMI 305
Query: 386 SGYVSNGRLEQALRSIAWM-QQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQF 444
Y NGR+ A M +Q G +PDV+T ++P + L+ G+ IH YA++ F
Sbjct: 306 GCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGF 361
Query: 445 LPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRS 504
LP++ + T+L+ MY +CG L + +FD M +NVISW ++I + ++NG+ AL +F+
Sbjct: 362 LPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQE 421
Query: 505 MQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGF 564
+ S PDS +A +L + +L G+EIH ++K + S + + MY MCG
Sbjct: 422 LWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGD 481
Query: 565 LECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSI 624
LE A+ F+ + +K ++W +II AY + + ++ LF +M PN TF LL+
Sbjct: 482 LEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAA 541
Query: 625 CNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRFRE 675
C+ +G DE F M R Y I+ EHY M+D++ R G A RF E
Sbjct: 542 CSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLE 592
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 130/505 (25%), Positives = 252/505 (49%), Gaps = 13/505 (2%)
Query: 90 EALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLV 149
EA+ M G+ + T+ +I + SL EG+ IH + G ++ ++ L+
Sbjct: 113 EAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLI 172
Query: 150 KMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLN 209
+Y G DAEKVF+E + WN+++ G + G +LF +M + G + +
Sbjct: 173 SLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFK--EMLKCGFKPD 230
Query: 210 VYTFSCVIKSFAGASALMQGLKTHALLIKNGF-VDYLILRTSLIDMYFKCGKIKLARRVF 268
++ + + + + G + H +++ +++ TS++DMY K G++ A R+F
Sbjct: 231 RFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIF 290
Query: 269 DETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIRE-GIYPNSVVLTILLPVIGEAWAR 327
+ R+IV W MI +A N +A C + M + G+ P+ + LLP A A
Sbjct: 291 NGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLP----ASAI 346
Query: 328 KLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSG 387
G+ +H Y ++ + + + ++L+DMY +C + SA +F E+N I W ++++
Sbjct: 347 LEGRTIHGYAMR-RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAA 405
Query: 388 YVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPN 447
YV NG+ AL + PD T+A+++P ++ +L+ G+EIHAY VK+++ N
Sbjct: 406 YVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSN 465
Query: 448 VSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQL 507
I+ SL+ MY+ CG L+ + K F+ + +++V+SW ++I + +G ++ +F M
Sbjct: 466 TIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIA 525
Query: 508 SKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAEN--IKMYGMCGFL 565
S+ P+ A +L+ + G E + + +K+++ P + + + G G
Sbjct: 526 SRVNPNKSTFASLLAACSISGMVDEGWE-YFESMKREYGIDPGIEHYGCMLDLIGRTGNF 584
Query: 566 ECAKLVFDAVP-VKGSITWTAIIEA 589
AK + +P V + W +++ A
Sbjct: 585 SAAKRFLEEMPFVPTARIWGSLLNA 609
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 108/236 (45%), Gaps = 4/236 (1%)
Query: 438 YAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDD 497
Y V Q N +T + ++ +++ +L+LFDEM + W MI G +
Sbjct: 56 YKVTKQV--NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIE 113
Query: 498 ALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIK 557
A+ + M + + D+ ++ + +L+ GK+IH V+K F S +V I
Sbjct: 114 AVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLIS 173
Query: 558 MYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFT 617
+Y G A+ VF+ +P + ++W ++I Y +L LF +M GF P+ F+
Sbjct: 174 LYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFS 233
Query: 618 FKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLI-MIDILTRFGRIEEAHR 672
L C+ ++ + + + + +IE + + ++D+ +++G + A R
Sbjct: 234 TMSALGACSHV-YSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAER 288
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 4/219 (1%)
Query: 67 LHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEG 126
+ EKN + I + + K AL + + + + TT +++ A + SL EG
Sbjct: 391 MAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEG 450
Query: 127 RLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIA 186
R IH +I + +N + LV MY CG EDA K F+ + V WN+++ +
Sbjct: 451 REIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVH 510
Query: 187 GKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLI 246
G R LF+ M V N TF+ ++ + + + + +G + + + +D I
Sbjct: 511 GFGRISVWLFSEMIASR--VNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGI 568
Query: 247 LRTS-LIDMYFKCGKIKLARRVFDETGDRDIV-VWGSMI 283
++D+ + G A+R +E +WGS++
Sbjct: 569 EHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLL 607
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 301 bits (770), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 181/577 (31%), Positives = 309/577 (53%), Gaps = 22/577 (3%)
Query: 110 FNALITACVRTRSLVEGRLIHTHIRINGLE-NNGFLRTKLVKMYTSCGSFEDAEKVFDES 168
F +L+ C+R+R+LV G++IH H+ L ++ + L ++Y SC E A VFDE
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 169 SSESVYP--WNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASAL 226
+ P W+ ++R A L Y KM GV+ YT+ V+K+ AG A+
Sbjct: 62 PHPRINPIAWDLMIRA--YASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 227 MQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGF 286
G H+ + + F + + T+L+D Y KCG++++A +VFDE RD+V W +MI+GF
Sbjct: 120 DDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 287 AHNRLRWEALDCARWMIR-EGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSE 345
+ + + + M R +G+ PN + + P +G A A + G+ VH Y + +S
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTR-MGFSN 238
Query: 346 ELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQ 405
+L V++ ++D+Y K + + A RVF ++NE+ W+A++ GYV N +++A M
Sbjct: 239 DLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML 298
Query: 406 QEGFRPDVVTVATVIPV--------CSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIM 457
VA V PV C++ L+ G+ +H YAVK F+ ++++ +++
Sbjct: 299 VND------NVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISF 352
Query: 458 YSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAM 517
Y+K G L + + F E+ +++VIS+ ++I C+ N R +++ +F M+ S RPD +
Sbjct: 353 YAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTL 412
Query: 518 ARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPV 577
+L+ L AL G HG + +A + + MY CG L+ AK VFD +
Sbjct: 413 LGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHK 472
Query: 578 KGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRI 637
+ ++W ++ +G + L +EALSLF+ M+ G P+ T +LS C+ +G DE ++
Sbjct: 473 RDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQL 532
Query: 638 FNVMSRG-YKIEALEEHYLIMIDILTRFGRIEEAHRF 673
FN MSRG + + +HY M D+L R G ++EA+ F
Sbjct: 533 FNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDF 569
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 155/522 (29%), Positives = 260/522 (49%), Gaps = 8/522 (1%)
Query: 65 LPLHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLV 124
+P NP A I+ +A + ++AL + M G+ T+ ++ AC R++
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 125 EGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAV 184
+G+LIH+H+ + + ++ T LV Y CG E A KVFDE + WNA++ G
Sbjct: 121 DGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 185 IAGKKRYRGVLFNYMKMREL-GVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVD 243
+ V+ ++ MR + G+ N+ T + + A AL +G H + GF +
Sbjct: 181 L--HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSN 238
Query: 244 YLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMI 303
L+++T ++D+Y K I ARRVFD ++ V W +MI G+ N + EA + M+
Sbjct: 239 DLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML 298
Query: 304 REGIYPNSVVLTILLPVIGEAWARKL--GQEVHAYVLKNERYSEELFVRSSLVDMYCKCR 361
+ I L ++G A L G+ VH Y +K + +L V+++++ Y K
Sbjct: 299 VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVK-AGFILDLTVQNTIISFYAKYG 357
Query: 362 DMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIP 421
+ A+R F E ++ I + +L++G V N R E++ R M+ G RPD+ T+ V+
Sbjct: 358 SLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLT 417
Query: 422 VCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVIS 481
CS L AL HG H Y V + + N SI +LM MY+KCG LD + ++FD M R+++S
Sbjct: 418 ACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVS 477
Query: 482 WTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVL 541
W M+ +G +AL +F SMQ + PD V + +LS + GK++ +
Sbjct: 478 WNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMS 537
Query: 542 KKDFASVPFVAAEN--IKMYGMCGFLECAKLVFDAVPVKGSI 581
+ DF +P + N + G+L+ A + +P + I
Sbjct: 538 RGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDI 579
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 295 bits (756), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 174/561 (31%), Positives = 288/561 (51%), Gaps = 6/561 (1%)
Query: 119 RTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNA 178
R+ S+ H I ++G N+ L TKL + + G+ A +F V+ +N
Sbjct: 29 RSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNV 88
Query: 179 LLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIK 238
L+RG + +F +++ + ++ N T++ I + +G G H +
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLR-KSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVV 147
Query: 239 NGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDC 298
+G L+L ++++ MYFK +++ AR+VFD ++D ++W +MI+G+ N + E++
Sbjct: 148 DGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQV 207
Query: 299 ARWMIREGIYP-NSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMY 357
R +I E ++ L +LP + E +LG ++H+ K YS + +V + + +Y
Sbjct: 208 FRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD-YVLTGFISLY 266
Query: 358 CKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVA 417
KC + +F E + + + + A++ GY SNG E +L + G R T+
Sbjct: 267 SKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLV 326
Query: 418 TVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVR 477
+++PV L + IH Y +K+ FL + S+ T+L +YSK ++ + KLFDE +
Sbjct: 327 SLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEK 383
Query: 478 NVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIH 537
++ SW AMI +NG +DA+ +FR MQ S+ P+ V + +LS QL AL LGK +H
Sbjct: 384 SLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVH 443
Query: 538 GQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQ 597
V DF S +V+ I MY CG + A+ +FD + K +TW +I YG + Q
Sbjct: 444 DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQ 503
Query: 598 EALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIM 657
EAL++F +M N G TP TF +L C+ AG E IFN M Y E +HY M
Sbjct: 504 EALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACM 563
Query: 658 IDILTRFGRIEEAHRFREMSS 678
+DIL R G ++ A +F E S
Sbjct: 564 VDILGRAGHLQRALQFIEAMS 584
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 150/530 (28%), Positives = 252/530 (47%), Gaps = 19/530 (3%)
Query: 106 NVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVF 165
N +T+ I+A R GR+IH ++G ++ L + +VKMY EDA KVF
Sbjct: 118 NSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVF 177
Query: 166 DESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMREL----GVQLNVYTFSCVIKSFA 221
D + WN + I+G ++ + + R+L +L+ T ++ + A
Sbjct: 178 DRMPEKDTILWNTM-----ISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232
Query: 222 GASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGS 281
L G++ H+L K G + + T I +Y KCGKIK+ +F E DIV + +
Sbjct: 233 ELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNA 292
Query: 282 MIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNE 341
MI G+ N +L + ++ G S L L+PV G L +H Y LK+
Sbjct: 293 MIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM---LIYAIHGYCLKSN 349
Query: 342 RYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSI 401
S V ++L +Y K ++ SA ++F E+ E++ W A++SGY NG E A+
Sbjct: 350 FLSHA-SVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLF 408
Query: 402 AWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKC 461
MQ+ F P+ VT+ ++ C+QL AL+ GK +H F ++ + T+L+ MY+KC
Sbjct: 409 REMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKC 468
Query: 462 GVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARML 521
G + + +LFD M +N ++W MI +G+ +AL +F M S P V +L
Sbjct: 469 GSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVL 528
Query: 522 SVSGQLKALKLGKEIHGQVLKKDFASVPFVA--AENIKMYGMCGFLECAKLVFDAVPVK- 578
+K G EI ++ + + P V A + + G G L+ A +A+ ++
Sbjct: 529 YACSHAGLVKEGDEIFNSMIHR-YGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEP 587
Query: 579 GSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQA 628
GS W ++ A + A ++ +K+ P++ + VLLS + A
Sbjct: 588 GSSVWETLLGACRIHKDTNLARTVSEKLFE--LDPDNVGYHVLLSNIHSA 635
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 215/459 (46%), Gaps = 7/459 (1%)
Query: 220 FAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVW 279
F ++++ +THA +I +GF + + L T L G I AR +F D+ ++
Sbjct: 27 FKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLF 86
Query: 280 GSMIAGFAHNRLRWEALDC-ARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVL 338
++ GF+ N +L A + PNS + + G+ +H +
Sbjct: 87 NVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAV 146
Query: 339 KNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQAL 398
+ S EL + S++V MY K + A +VF E++ ILW ++SGY N +++
Sbjct: 147 VDGCDS-ELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESI 205
Query: 399 RSIAWMQQEG-FRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIM 457
+ + E R D T+ ++P ++L+ L G +IH+ A K + ++T + +
Sbjct: 206 QVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISL 265
Query: 458 YSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAM 517
YSKCG + LF E +++++ AMI NG + +L +F+ + LS R S +
Sbjct: 266 YSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTL 325
Query: 518 ARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPV 577
++ VSG L L IHG LK +F S V+ +Y +E A+ +FD P
Sbjct: 326 VSLVPVSGH---LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPE 382
Query: 578 KGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRI 637
K +W A+I Y N L ++A+SLF +M+ F+PN T +LS C Q G A +
Sbjct: 383 KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG-ALSLGKW 441
Query: 638 FNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRFREM 676
+ + R E+ +I + + G I EA R ++
Sbjct: 442 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDL 480
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 201/436 (46%), Gaps = 18/436 (4%)
Query: 93 VILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMY 152
V D +++ ++ TT ++ A + L G IH+ G ++ ++ T + +Y
Sbjct: 207 VFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLY 266
Query: 153 TSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYT 212
+ CG + +F E + +NA++ G G+ LF + + G +L T
Sbjct: 267 SKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS--GARLRSST 324
Query: 213 FSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETG 272
++ + LM H +K+ F+ + + T+L +Y K +I+ AR++FDE+
Sbjct: 325 LVSLVPV---SGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESP 381
Query: 273 DRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQE 332
++ + W +MI+G+ N L +A+ R M + PN V +T +L + A LG+
Sbjct: 382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKW 441
Query: 333 VHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNG 392
VH V ++ + ++V ++L+ MY KC + A R+F ++NE+ W ++SGY +G
Sbjct: 442 VHDLV-RSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHG 500
Query: 393 RLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKE-----IHAYAVKNQFLPN 447
+ ++AL M G P VT V+ CS + G E IH Y F P+
Sbjct: 501 QGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYG----FEPS 556
Query: 448 VSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVIS-WTAMIDSCIENGRLDDALGVFRSMQ 506
V ++ + + G L +L+ + M + S W ++ +C D L S +
Sbjct: 557 VKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGAC--RIHKDTNLARTVSEK 614
Query: 507 LSKHRPDSVAMARMLS 522
L + PD+V +LS
Sbjct: 615 LFELDPDNVGYHVLLS 630
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 91/182 (50%), Gaps = 4/182 (2%)
Query: 85 QNKLKE-ALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGF 143
QN L E A+ + M + N T +++AC + +L G+ +H +R E++ +
Sbjct: 397 QNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIY 456
Query: 144 LRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRE 203
+ T L+ MY CGS +A ++FD + ++ WN ++ G + G+ + L + +M
Sbjct: 457 VSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQG--QEALNIFYEMLN 514
Query: 204 LGVQLNVYTFSCVIKSFAGASALMQGLKT-HALLIKNGFVDYLILRTSLIDMYFKCGKIK 262
G+ TF CV+ + + A + +G + ++++ + GF + ++D+ + G ++
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 263 LA 264
A
Sbjct: 575 RA 576
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 293 bits (749), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 189/601 (31%), Positives = 311/601 (51%), Gaps = 8/601 (1%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
I + + AL + M +G+P+ +++F AL+ AC + R + G +H+ + G
Sbjct: 154 IGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGY 213
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFD--ESSSESVYPWNALLRGAVIAGKKRYRGVLF 196
+ GF+ LV MY A ++FD + ++V WN++L +GK LF
Sbjct: 214 HSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVL-WNSILSSYSTSGKSLETLELF 272
Query: 197 NYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNG-FVDYLILRTSLIDMY 255
M M G N YT + + G S G + HA ++K+ L + +LI MY
Sbjct: 273 REMHM--TGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMY 330
Query: 256 FKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLT 315
+CGK+ A R+ + + D+V W S+I G+ N + EAL+ MI G + V +T
Sbjct: 331 TRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMT 390
Query: 316 ILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEE 375
++ G G E+HAYV+K+ + L V ++L+DMY KC R F +
Sbjct: 391 SIIAASGRLSNLLAGMELHAYVIKHG-WDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD 449
Query: 376 RNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEI 435
++ I WT +++GY N +AL + ++ D + + +++ S LK++ KEI
Sbjct: 450 KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI 509
Query: 436 HAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRL 495
H + ++ L V I L+ +Y KC + Y+ ++F+ ++ ++V+SWT+MI S NG
Sbjct: 510 HCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNE 568
Query: 496 DDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAEN 555
+A+ +FR M + DSVA+ +LS + L AL G+EIH +L+K F +A
Sbjct: 569 SEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAV 628
Query: 556 IKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNH 615
+ MY CG L+ AK VFD + KG + +T++I AYG + + A+ LFDKMR+ +P+H
Sbjct: 629 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDH 688
Query: 616 FTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRFRE 675
+F LL C+ AG DE +M Y++E EHY+ ++D+L R + EA F +
Sbjct: 689 ISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVK 748
Query: 676 M 676
M
Sbjct: 749 M 749
Score = 259 bits (661), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 174/568 (30%), Positives = 295/568 (51%), Gaps = 20/568 (3%)
Query: 52 TKKSAEKDAF-PSSLPLHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTF 110
T+ S ++ F S+ P+ +P+ D L EA LD + + PV F
Sbjct: 34 TEPSCRRNPFRQSNQPVQVPSPKLACFD-------GVLTEAFQRLD-VSENNSPVE--AF 83
Query: 111 NALITACVRTRSLVEGRLIHTHI--RINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDES 168
++ C + R++ +GR +H+ I E + FL KLV MY CGS +DAEKVFDE
Sbjct: 84 AYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 169 SSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQ 228
+ + WN ++ V G+ L Y MR GV L + +F ++K+ A +
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEP--ASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 229 GLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDR-DIVVWGSMIAGFA 287
G + H+LL+K G+ + +L+ MY K + ARR+FD ++ D V+W S+++ ++
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 288 HNRLRWEALDCARWMIREGIYPNS-VVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEE 346
+ E L+ R M G PNS +++ L G ++A KLG+E+HA VLK+ +S E
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA-KLGKEIHASVLKSSTHSSE 319
Query: 347 LFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQ 406
L+V ++L+ MY +C M A R+ + + + W +L+ GYV N ++AL + M
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 379
Query: 407 EGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDY 466
G + D V++ ++I +L L G E+HAY +K+ + N+ + +L+ MYSKC + Y
Sbjct: 380 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCY 439
Query: 467 SLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQ 526
+ F M +++ISWT +I +N +AL +FR + + D + + +L S
Sbjct: 440 MGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSV 499
Query: 527 LKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAI 586
LK++ + KEIH +L+K + E + +YG C + A VF+++ K ++WT++
Sbjct: 500 LKSMLIVKEIHCHILRKGLLDT-VIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSM 558
Query: 587 IEAYGYNDLCQEALSLFDKMRNGGFTPN 614
I + N EA+ LF +M G + +
Sbjct: 559 ISSSALNGNESEAVELFRRMVETGLSAD 586
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 73/136 (53%), Gaps = 6/136 (4%)
Query: 492 NGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFAS--VP 549
+G L +A F+ + +S++ A A +L + G+ +A+ G+++H ++ K F S +
Sbjct: 61 DGVLTEA---FQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKT-FPSFELD 116
Query: 550 FVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNG 609
F+A + + MYG CG L+ A+ VFD +P + + W +I AY N AL+L+ MR
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE 176
Query: 610 GFTPNHFTFKVLLSIC 625
G +F LL C
Sbjct: 177 GVPLGLSSFPALLKAC 192
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 290 bits (741), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 177/552 (32%), Positives = 285/552 (51%), Gaps = 6/552 (1%)
Query: 125 EGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSES-VYPWNALLRGA 183
EG+ IH + N L+ + FL+T L+ MY G DA +VF E +S V WN ++ G
Sbjct: 188 EGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG- 246
Query: 184 VIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVD 243
G L YM + V+L +F+ + + + + G + H ++K G +
Sbjct: 247 -FGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHN 305
Query: 244 YLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMI 303
+ TSL+ MY KCG + A VF D+ + +W +M+A +A N + ALD +M
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365
Query: 304 REGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDM 363
++ + P+S L+ ++ G+ VHA + K S + S+L+ +Y KC
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTST-IESALLTLYSKCGCD 424
Query: 364 NSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQE--GFRPDVVTVATVIP 421
A+ VF EE++ + W +L+SG NG+ ++AL+ M+ + +PD + +V
Sbjct: 425 PDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTN 484
Query: 422 VCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVIS 481
C+ L+AL G ++H +K + NV + +SL+ +YSKCG+ + +LK+F M N+++
Sbjct: 485 ACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA 544
Query: 482 WTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVL 541
W +MI N + ++ +F M PDSV++ +L +L GK +HG L
Sbjct: 545 WNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTL 604
Query: 542 KKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALS 601
+ S + I MY CGF + A+ +F + K ITW +I YG + C ALS
Sbjct: 605 RLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALS 664
Query: 602 LFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDIL 661
LFD+M+ G +P+ TF L+S CN +GF +E IF M + Y IE EHY M+D+L
Sbjct: 665 LFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLL 724
Query: 662 TRFGRIEEAHRF 673
R G +EEA+ F
Sbjct: 725 GRAGLLEEAYSF 736
Score = 240 bits (612), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 161/572 (28%), Positives = 282/572 (49%), Gaps = 17/572 (2%)
Query: 71 NPRAIYKDIQRFARQNKLKEALVILDYMDQQG-IPVNVTTFNALITACVRTRSLVEGRLI 129
+P +I I+ ++ + +AL + D +V TF +L+ AC +L G+ I
Sbjct: 23 SPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTI 82
Query: 130 HTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFD-------ESSSESVYPWNALLRG 182
H + + G + F+ T LV MY CG + A +VFD S+ V WN+++ G
Sbjct: 83 HGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDG 142
Query: 183 AVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFA--GASALMQGLKTHALLIKNG 240
+R++ + + +M GV+ + ++ S V+ G +G + H +++N
Sbjct: 143 YF--KFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNS 200
Query: 241 FVDYLILRTSLIDMYFKCGKIKLARRVFDETGDR-DIVVWGSMIAGFAHNRLRWEALDCA 299
L+T+LIDMYFK G A RVF E D+ ++V+W MI GF + + +LD
Sbjct: 201 LDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY 260
Query: 300 RWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCK 359
+ S T L ++ G+++H V+K +++ +V +SL+ MY K
Sbjct: 261 MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDP-YVCTSLLSMYSK 319
Query: 360 CRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATV 419
C + A VF ++ +W A+++ Y N AL +M+Q+ PD T++ V
Sbjct: 320 CGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNV 379
Query: 420 IPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNV 479
I CS L N+GK +HA K +I ++L+ +YSKCG + +F ME +++
Sbjct: 380 ISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDM 439
Query: 480 ISWTAMIDSCIENGRLDDALGVFRSMQLSKH--RPDSVAMARMLSVSGQLKALKLGKEIH 537
++W ++I +NG+ +AL VF M+ +PDS M + + L+AL+ G ++H
Sbjct: 440 VAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVH 499
Query: 538 GQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQ 597
G ++K FV + I +Y CG E A VF ++ + + W ++I Y N+L +
Sbjct: 500 GSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPE 559
Query: 598 EALSLFDKMRNGGFTPNHFTF-KVLLSICNQA 628
++ LF+ M + G P+ + VL++I + A
Sbjct: 560 LSIDLFNLMLSQGIFPDSVSITSVLVAISSTA 591
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 148/546 (27%), Positives = 252/546 (46%), Gaps = 24/546 (4%)
Query: 108 TTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDE 167
T+F + AC ++ + GR IH + GL N+ ++ T L+ MY+ CG +AE VF
Sbjct: 273 TSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSC 332
Query: 168 SSSESVYPWNALLRGAVIAGKKRYRGV-LFNYMKMRELGVQLNVYTFSCVIKSFAGASAL 226
+ + WNA++ A Y + LF + MR+ V + +T S VI +
Sbjct: 333 VVDKRLEIWNAMV-AAYAENDYGYSALDLFGF--MRQKSVLPDSFTLSNVISCCSVLGLY 389
Query: 227 MQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGF 286
G HA L K + ++L+ +Y KCG A VF ++D+V WGS+I+G
Sbjct: 390 NYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGL 449
Query: 287 AHNRLRWEALDCARWM--IREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYS 344
N EAL M + + P+S ++T + A + G +VH ++K
Sbjct: 450 CKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLV- 508
Query: 345 EELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWM 404
+FV SSL+D+Y KC A +VF N + W +++S Y N E ++ M
Sbjct: 509 LNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLM 568
Query: 405 QQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVL 464
+G PD V++ +V+ S +L GK +H Y ++ + + +L+ MY KCG
Sbjct: 569 LSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFS 628
Query: 465 DYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVS 524
Y+ +F +M+ +++I+W MI +G AL +F M+ + PD V ++S
Sbjct: 629 KYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISAC 688
Query: 525 GQLKALKLGKEIHGQVLKKDFASVPFVA--AENIKMYGMCGFLECAKLVFDAVPVKG-SI 581
++ GK I + +K+D+ P + A + + G G LE A A+P++ S
Sbjct: 689 NHSGFVEEGKNIF-EFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSS 747
Query: 582 TWTAIIEAYGYND------LCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEAC 635
W ++ A + L E L + R T+ L+++ +AG +EA
Sbjct: 748 IWLCLLSASRTHHNVELGILSAEKLLRMEPERGS-------TYVQLINLYMEAGLKNEAA 800
Query: 636 RIFNVM 641
++ +M
Sbjct: 801 KLLGLM 806
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 154/353 (43%), Gaps = 5/353 (1%)
Query: 51 HTKKSAEKDAFPSSLPLHEKNPRAIYKDIQRFARQNKLKEALVILDYM--DQQGIPVNVT 108
++K + DA+ + EK+ A I + K KEAL + M D + +
Sbjct: 418 YSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSD 477
Query: 109 TFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDES 168
++ AC +L G +H + GL N F+ + L+ +Y+ CG E A KVF
Sbjct: 478 IMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSM 537
Query: 169 SSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQ 228
S+E++ WN+++ LFN M + G+ + + + V+ + + ++L++
Sbjct: 538 STENMVAWNSMISCYSRNNLPELSIDLFNLMLSQ--GIFPDSVSITSVLVAISSTASLLK 595
Query: 229 GLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAH 288
G H ++ G L+ +LIDMY KCG K A +F + + ++ W MI G+
Sbjct: 596 GKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGS 655
Query: 289 NRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELF 348
+ AL M + G P+ V L+ + + G+ + ++ ++ +
Sbjct: 656 HGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNME 715
Query: 349 VRSSLVDMYCKCRDMNSAWRVFYETE-ERNEILWTALMSGYVSNGRLEQALRS 400
+++VD+ + + A+ E + +W L+S ++ +E + S
Sbjct: 716 HYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILS 768
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 283 bits (725), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 174/580 (30%), Positives = 294/580 (50%), Gaps = 6/580 (1%)
Query: 100 QQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFE 159
Q + + +T +T + R+LV GR +H I G LV Y CG
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 160 DAEKVFDESSSESVYPWNALLRG-AVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIK 218
A +F+ + V WN+L+ G + G V+ + +MR + N YT + + K
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 219 SFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVV 278
+ + + G + HAL++K + + TSL+ MY K G ++ +VF +R+
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYT 186
Query: 279 WGSMIAGFAHNRLRWEALDCARWMIREG--IYPNSVVLTILLPVIGEAWARKLGQEVHAY 336
W +M++G+A EA+ +RE + V T +L + LG+++H
Sbjct: 187 WSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCI 246
Query: 337 VLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQ 396
+KN + + ++LV MY KC +N A ++F + +RN I W+A+++GY NG +
Sbjct: 247 TIKNGLLGF-VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLE 305
Query: 397 ALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMI 456
A++ + M G +P T+ V+ CS + L GK++H++ +K F ++ T+L+
Sbjct: 306 AVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVD 365
Query: 457 MYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVA 516
MY+K G L + K FD ++ R+V WT++I ++N ++AL ++R M+ + P+
Sbjct: 366 MYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPT 425
Query: 517 MARMLSVSGQLKALKLGKEIHGQVLKKDFA-SVPFVAAENIKMYGMCGFLECAKLVFDAV 575
MA +L L L+LGK++HG +K F VP +A + MY CG LE LVF
Sbjct: 426 MASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALS-TMYSKCGSLEDGNLVFRRT 484
Query: 576 PVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEAC 635
P K ++W A+I +N EAL LF++M G P+ TF ++S C+ GF +
Sbjct: 485 PNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGW 544
Query: 636 RIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRFRE 675
FN+MS ++ +HY M+D+L+R G+++EA F E
Sbjct: 545 FYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIE 584
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 115/236 (48%), Gaps = 2/236 (0%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
+ +++ + EA+ + M GI + T ++ AC L EG+ +H+ + G
Sbjct: 294 VTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGF 353
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNY 198
E + F T LV MY G DA K FD V W +L+ G V +L Y
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALIL--Y 411
Query: 199 MKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKC 258
+M+ G+ N T + V+K+ + + L G + H IK+GF + + ++L MY KC
Sbjct: 412 RRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKC 471
Query: 259 GKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVL 314
G ++ VF T ++D+V W +MI+G +HN EAL+ M+ EG+ P+ V
Sbjct: 472 GSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTF 527
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 4/215 (1%)
Query: 67 LHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEG 126
L E++ I + + + +EAL++ M GI N T +++ AC +L G
Sbjct: 383 LQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELG 442
Query: 127 RLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIA 186
+ +H H +G + + L MY+ CGS ED VF + ++ V WNA++ G
Sbjct: 443 KQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHN 502
Query: 187 GKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLI 246
G+ LF +M G++ + TF +I + + + +G ++ +D +
Sbjct: 503 GQGDEALELFE--EMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKV 560
Query: 247 LRTS-LIDMYFKCGKIKLARRVFDETG-DRDIVVW 279
+ ++D+ + G++K A+ + D + +W
Sbjct: 561 DHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLW 595
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 283 bits (723), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 167/596 (28%), Positives = 294/596 (49%), Gaps = 7/596 (1%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
I + K+ L M + + TF +L+ AC + L G IH + +NG
Sbjct: 18 INHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGF 77
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNY 198
++ ++ + LV +Y G A KVF+E V W A++ AG L N
Sbjct: 78 SSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNE 137
Query: 199 MKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKC 258
M+ + G++ T +++ +G + Q H + GF + + S++++Y KC
Sbjct: 138 MRFQ--GIKPGPVT---LLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKC 192
Query: 259 GKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILL 318
+ A+ +FD+ RD+V W +MI+G+A E L M +G+ P+ L
Sbjct: 193 DHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASL 252
Query: 319 PVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNE 378
V G ++G+ +H ++K + ++ ++++L+ MY KC +++RV ++
Sbjct: 253 SVSGTMCDLEMGRMLHCQIVKT-GFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDV 311
Query: 379 ILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAY 438
+ WT ++SG + GR E+AL + M Q G +A+V+ C+QL + + G +H Y
Sbjct: 312 VCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGY 371
Query: 439 AVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDA 498
+++ + + + SL+ MY+KCG LD SL +F+ M R+++SW A+I +N L A
Sbjct: 372 VLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKA 431
Query: 499 LGVFRSMQL-SKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIK 557
L +F M+ + + DS + +L AL +GK IH V++ V +
Sbjct: 432 LLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVD 491
Query: 558 MYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFT 617
MY CG+LE A+ FD++ K ++W +I YG++ AL ++ + + G PNH
Sbjct: 492 MYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVI 551
Query: 618 FKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRF 673
F +LS C+ G + +IF+ M R + +E EH ++D+L R RIE+A +F
Sbjct: 552 FLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKF 607
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 196/419 (46%), Gaps = 6/419 (1%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
I +A + E L +L M G+ + TF A ++ L GR++H I G
Sbjct: 217 ISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGF 276
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNY 198
+ + L+T L+ MY CG E + +V + ++ V W ++ G + G+ ++F+
Sbjct: 277 DVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFS- 335
Query: 199 MKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKC 258
+M + G L+ + V+ S A + G H ++++G+ SLI MY KC
Sbjct: 336 -EMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKC 394
Query: 259 GKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYP-NSVVLTIL 317
G + + +F+ +RD+V W ++I+G+A N +AL M + + +S + L
Sbjct: 395 GHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSL 454
Query: 318 LPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERN 377
L A A +G+ +H V+++ L V ++LVDMY KC + +A R F ++
Sbjct: 455 LQACSSAGALPVGKLIHCIVIRSFIRPCSL-VDTALVDMYSKCGYLEAAQRCFDSISWKD 513
Query: 378 EILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHA 437
+ W L++GY +G+ + AL + G P+ V V+ CS + G +I +
Sbjct: 514 VVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFS 573
Query: 438 YAVKNQFL-PNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMI-DSCIENGR 494
V++ + PN + ++ + + ++ + K + E R I +I D+C NG+
Sbjct: 574 SMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGK 632
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 279 bits (714), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 173/596 (29%), Positives = 297/596 (49%), Gaps = 11/596 (1%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
I F + + AL + + M G N TF++++ +C R + G +H + G
Sbjct: 96 ISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGF 155
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNY 198
E N + + L +Y+ CG F++A ++F + W ++ V G +++R L Y
Sbjct: 156 EGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLV--GARKWREALQFY 213
Query: 199 MKMRELGVQLNVYTFSCVIKSFAGASALMQ---GLKTHALLIKNGFVDYLILRTSLIDMY 255
+M + GV N +TF ++ GAS+ + G H+ +I G ++L+TSL+D Y
Sbjct: 214 SEMVKAGVPPNEFTFVKLL----GASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFY 269
Query: 256 FKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLT 315
+ K++ A RV + +G++D+ +W S+++GF N EA+ M G+ PN+ +
Sbjct: 270 SQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYS 329
Query: 316 ILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMN-SAWRVFYETE 374
+L + + G+++H+ +K + + V ++LVDMY KC A RVF
Sbjct: 330 AILSLCSAVRSLDFGKQIHSQTIK-VGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMV 388
Query: 375 ERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKE 434
N + WT L+ G V +G ++ + M + P+VVT++ V+ CS+L+ + E
Sbjct: 389 SPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLE 448
Query: 435 IHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGR 494
IHAY ++ + + SL+ Y+ +DY+ + M+ R+ I++T+++ E G+
Sbjct: 449 IHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGK 508
Query: 495 LDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAE 554
+ AL V M R D +++ +S S L AL+ GK +H +K F+ V
Sbjct: 509 HEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNS 568
Query: 555 NIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPN 614
+ MY CG LE AK VF+ + ++W ++ N ALS F++MR P+
Sbjct: 569 LVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPD 628
Query: 615 HFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEA 670
TF +LLS C+ D F VM + Y IE EHY+ ++ IL R GR+EEA
Sbjct: 629 SVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEA 684
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 145/574 (25%), Positives = 273/574 (47%), Gaps = 13/574 (2%)
Query: 113 LITACVRTRSLVE------GRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFD 166
L +C+R S E G IH + GL N L L+ +Y +A K+FD
Sbjct: 23 LQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFD 82
Query: 167 ESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASAL 226
E S +V+ W ++ + + + L + +M G N +TFS V++S AG +
Sbjct: 83 EMSHRTVFAWTVMI--SAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDI 140
Query: 227 MQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGF 286
G + H +IK GF ++ +SL D+Y KCG+ K A +F + D + W MI+
Sbjct: 141 SYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSL 200
Query: 287 AHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEE 346
R EAL M++ G+ PN LL + G+ +H+ ++
Sbjct: 201 VGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA-SSFLGLEFGKTIHSNIIV-RGIPLN 258
Query: 347 LFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQ 406
+ +++SLVD Y + M A RV + E++ LWT+++SG+V N R ++A+ + M+
Sbjct: 259 VVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRS 318
Query: 407 EGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDY 466
G +P+ T + ++ +CS +++L+ GK+IH+ +K F + + +L+ MY KC +
Sbjct: 319 LGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEV 378
Query: 467 -SLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSG 525
+ ++F M NV+SWT +I +++G + D G+ M + P+ V ++ +L
Sbjct: 379 EASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Query: 526 QLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTA 585
+L+ ++ EIH +L++ V + Y ++ A V ++ + +IT+T+
Sbjct: 439 KLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTS 498
Query: 586 IIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGY 645
++ + + ALS+ + M G + + +S G A E + + S
Sbjct: 499 LVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLG-ALETGKHLHCYSVKS 557
Query: 646 KIEALEEHYLIMIDILTRFGRIEEAHR-FREMSS 678
++D+ ++ G +E+A + F E+++
Sbjct: 558 GFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT 591
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 278 bits (711), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 184/607 (30%), Positives = 295/607 (48%), Gaps = 54/607 (8%)
Query: 119 RTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDE--SSSESVYPW 176
+ +++ + +LIH + G+ L + L+ Y S G A + S VY W
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLN-LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHW 95
Query: 177 NALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALL 236
N+L+R G L+ + M L + YTF V K+ S++ G HAL
Sbjct: 96 NSLIRSYGDNGCAN--KCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALS 153
Query: 237 IKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEAL 296
+ GF+ + + +L+ MY +C + AR+VFDE D+V W S+I +A AL
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVAL 213
Query: 297 DCARWMIRE-GIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVD 355
+ M E G P+++ L +LP LG+++H + + +E + +FV + LVD
Sbjct: 214 EMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMI-QNMFVGNCLVD 272
Query: 356 MYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQE-------- 407
MY KC M+ A VF ++ + W A+++GY GR E A+R MQ+E
Sbjct: 273 MYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT 332
Query: 408 ---------------------------GFRPDVVTVATVIPVCSQLKALNHGKEIHAYAV 440
G +P+ VT+ +V+ C+ + AL HGKEIH YA+
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 441 K-------NQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEM--EVRNVISWTAMIDSCIE 491
K N +I L+ MY+KC +D + +FD + + R+V++WT MI +
Sbjct: 393 KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQ 452
Query: 492 NGRLDDALGVFRSM--QLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVP 549
+G + AL + M + + RP++ ++ L L AL++GK+IH L+ +VP
Sbjct: 453 HGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP 512
Query: 550 -FVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRN 608
FV+ I MY CG + A+LVFD + K +TWT+++ YG + +EAL +FD+MR
Sbjct: 513 LFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRR 572
Query: 609 GGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIE 668
GF + T V+L C+ +G D+ FN M + + EHY ++D+L R GR+
Sbjct: 573 IGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLN 632
Query: 669 EAHRFRE 675
A R E
Sbjct: 633 AALRLIE 639
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/528 (27%), Positives = 240/528 (45%), Gaps = 51/528 (9%)
Query: 109 TFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDES 168
TF + AC S+ G H + G +N F+ LV MY+ C S DA KVFDE
Sbjct: 129 TFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM 188
Query: 169 SSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQ 228
S V WN+++ GK + +F+ M E G + + T V+ A
Sbjct: 189 SVWDVVSWNSIIESYAKLGKPKVALEMFSRMT-NEFGCRPDNITLVNVLPPCASLGTHSL 247
Query: 229 GLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIA---- 284
G + H + + + + + L+DMY KCG + A VF +D+V W +M+A
Sbjct: 248 GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQ 307
Query: 285 -------------------------------GFAHNRLRWEALDCARWMIREGIYPNSVV 313
G+A L +EAL R M+ GI PN V
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 314 LTILLPVIGEAWARKLGQEVHAYVLK------NERYSEELFVRSSLVDMYCKCRDMNSAW 367
L +L A G+E+H Y +K + +E V + L+DMY KC+ +++A
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTAR 427
Query: 368 RVF--YETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGF--RPDVVTVATVIPVC 423
+F +ER+ + WT ++ GY +G +AL ++ M +E RP+ T++ + C
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Query: 424 SQLKALNHGKEIHAYAVKNQFLPNVSIITSLMI-MYSKCGVLDYSLKLFDEMEVRNVISW 482
+ L AL GK+IHAYA++NQ +++ +I MY+KCG + + +FD M +N ++W
Sbjct: 488 ASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTW 547
Query: 483 TAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLK 542
T+++ +G ++ALG+F M+ + D V + +L + G E + +K
Sbjct: 548 TSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNR-MK 606
Query: 543 KDFASVPFVA--AENIKMYGMCGFLECAKLVFDAVPVK-GSITWTAII 587
F P A + + G G L A + + +P++ + W A +
Sbjct: 607 TVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFL 654
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 144/506 (28%), Positives = 238/506 (47%), Gaps = 63/506 (12%)
Query: 79 IQRFARQNKLKEALVILDYMDQQ-GI-PVNVTTFNALI-TACVRTRSLVEGRLIHTHIRI 135
I+ +A+ K K AL + M + G P N+T N L A + T SL G+ +H
Sbjct: 200 IESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSL--GKQLHCFAVT 257
Query: 136 NGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVL 195
+ + N F+ LV MY CG ++A VF S + V WNA++ G G R+ +
Sbjct: 258 SEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIG--RFEDAV 315
Query: 196 FNYMKMRELGVQLNVYTFSCVIKSFA---------------------------------- 221
+ KM+E ++++V T+S I +A
Sbjct: 316 RLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGC 375
Query: 222 -GASALMQGLKTHALLIK-------NGFVDYLILRTSLIDMYFKCGKIKLARRVFDETG- 272
ALM G + H IK NG D ++ LIDMY KC K+ AR +FD
Sbjct: 376 ASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSP 435
Query: 273 -DRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIY--PNSVVLTILLPVIGEAWARKL 329
+RD+V W MI G++ + +AL+ M E PN+ ++ L A ++
Sbjct: 436 KERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRI 495
Query: 330 GQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYV 389
G+++HAY L+N++ + LFV + L+DMY KC ++ A VF +NE+ WT+LM+GY
Sbjct: 496 GKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYG 555
Query: 390 SNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQF--LPN 447
+G E+AL M++ GF+ D VT+ V+ CS ++ G E + +K F P
Sbjct: 556 MHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME-YFNRMKTVFGVSPG 614
Query: 448 VSIITSLMIMYSKCGVLDYSLKLFDEMEVR-NVISWTAMIDSCIENGRLDDALGVFRSMQ 506
L+ + + G L+ +L+L +EM + + W A + C +G+++ LG + + +
Sbjct: 615 PEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE--LGEYAAEK 672
Query: 507 L----SKHRPDSVAMARMLSVSGQLK 528
+ S H ++ + + +G+ K
Sbjct: 673 ITELASNHDGSYTLLSNLYANAGRWK 698
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 14/265 (5%)
Query: 421 PVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRN-- 478
P + K ++ K IH + L +++ + L+ Y G L +++ L +
Sbjct: 33 PFIHKCKTISQVKLIHQKLLSFGIL-TLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAG 91
Query: 479 VISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHG 538
V W ++I S +NG + L +F M PD+ + G++ +++ G+ H
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 539 QVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQE 598
L F S FV + MY C L A+ VFD + V ++W +IIE+Y +
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211
Query: 599 ALSLFDKMRNG-GFTPNHFTFKVLLSICNQAGFAD--EACRIFNVMSRGYKIEALEEHYL 655
AL +F +M N G P++ T +L C G + F V S E ++ ++
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS-----EMIQNMFV 266
Query: 656 --IMIDILTRFGRIEEAHR-FREMS 677
++D+ + G ++EA+ F MS
Sbjct: 267 GNCLVDMYAKCGMMDEANTVFSNMS 291
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 278 bits (710), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 174/573 (30%), Positives = 292/573 (50%), Gaps = 6/573 (1%)
Query: 112 ALITACVR-TRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSS 170
+L+ C T+SL +L+H I GL + L L+ +Y +C A VF+
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 171 ES-VYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQL-NVYTFSCVIKSFAGASALMQ 228
S VY WN+L+ G + + L + ++ + + + +TF VIK++
Sbjct: 68 RSDVYIWNSLMSG--YSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFL 125
Query: 229 GLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAH 288
G H L++K+G+V +++ +SL+ MY K + + +VFDE +RD+ W ++I+ F
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 289 NRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELF 348
+ +AL+ M G PNSV LT+ + + G+E+H +K + + + +
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVK-KGFELDEY 244
Query: 349 VRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEG 408
V S+LVDMY KC + A VF + ++ + W +++ GYV+ G + + + M EG
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 409 FRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSL 468
RP T+ +++ CS+ + L HGK IH Y +++ ++ + SL+ +Y KCG + +
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 469 KLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLK 528
+F + + SW MI S I G A+ V+ M +PD V +L QL
Sbjct: 365 TVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 424
Query: 529 ALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIE 588
AL+ GK+IH + + + + + + MY CG + A +F+++P K ++WT +I
Sbjct: 425 ALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMIS 484
Query: 589 AYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIE 648
AYG + +EAL FD+M+ G P+ T +LS C AG DE + F+ M Y IE
Sbjct: 485 AYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIE 544
Query: 649 ALEEHYLIMIDILTRFGRIEEAHRFREMSSSLS 681
+ EHY MIDIL R GR+ EA+ + + S
Sbjct: 545 PIIEHYSCMIDILGRAGRLLEAYEIIQQTPETS 577
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 191/381 (50%), Gaps = 7/381 (1%)
Query: 56 AEKDAFPSSLPLHEKNPRAIYKD----IQRFARQNKLKEALVILDYMDQQGIPVNVTTFN 111
A+ + F +SL + ++ P I F + + ++AL + M+ G N +
Sbjct: 153 AKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLT 212
Query: 112 ALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSE 171
I+AC R L G+ IH G E + ++ + LV MY C E A +VF + +
Sbjct: 213 VAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRK 272
Query: 172 SVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLK 231
S+ WN++++G V G + + N M + G + + T + ++ + + + L+ G
Sbjct: 273 SLVAWNSMIKGYVAKGDSKSCVEILNRMIIE--GTRPSQTTLTSILMACSRSRNLLHGKF 330
Query: 232 THALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRL 291
H +I++ + + SLID+YFKCG+ LA VF +T W MI+ +
Sbjct: 331 IHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGN 390
Query: 292 RWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRS 351
++A++ M+ G+ P+ V T +LP + A + G+++H + ++ ++EL + S
Sbjct: 391 WFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLL-S 449
Query: 352 SLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRP 411
+L+DMY KC + A+R+F +++ + WT ++S Y S+G+ +AL MQ+ G +P
Sbjct: 450 ALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKP 509
Query: 412 DVVTVATVIPVCSQLKALNHG 432
D VT+ V+ C ++ G
Sbjct: 510 DGVTLLAVLSACGHAGLIDEG 530
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 276 bits (706), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 177/598 (29%), Positives = 298/598 (49%), Gaps = 10/598 (1%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
I+ F++ EAL + + + + TF ++I AC G L++ I G
Sbjct: 78 IRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGF 137
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNY 198
E++ F+ LV MY+ G A +VFDE + WN+L+ G G Y L Y
Sbjct: 138 ESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG--YYEEALEIY 195
Query: 199 MKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKC 258
+++ + + +T S V+ +F + QG H +K+G +++ L+ MY K
Sbjct: 196 HELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKF 255
Query: 259 GKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGI---YPNSVVLT 315
+ ARRVFDE RD V + +MI G+ L+ E ++ + M E + P+ + ++
Sbjct: 256 RRPTDARRVFDEMDVRDSVSYNTMICGY----LKLEMVEESVRMFLENLDQFKPDLLTVS 311
Query: 316 ILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEE 375
+L G L + ++ Y+LK + E VR+ L+D+Y KC DM +A VF E
Sbjct: 312 SVLRACGHLRDLSLAKYIYNYMLK-AGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370
Query: 376 RNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEI 435
++ + W +++SGY+ +G L +A++ M + D +T +I V ++L L GK +
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430
Query: 436 HAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRL 495
H+ +K+ ++S+ +L+ MY+KCG + SLK+F M + ++W +I +C+ G
Sbjct: 431 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDF 490
Query: 496 DDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAEN 555
L V M+ S+ PD L + L A +LGKEIH +L+ + S +
Sbjct: 491 ATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNAL 550
Query: 556 IKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNH 615
I+MY CG LE + VF+ + + +TWT +I AYG ++AL F M G P+
Sbjct: 551 IEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDS 610
Query: 616 FTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRF 673
F ++ C+ +G DE F M YKI+ + EHY ++D+L+R +I +A F
Sbjct: 611 VVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEF 668
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 165/566 (29%), Positives = 287/566 (50%), Gaps = 11/566 (1%)
Query: 116 ACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDE-SSSESVY 174
A + +L E R IH + GL+++ F KL+ Y+ + VF S +++VY
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72
Query: 175 PWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHA 234
WN+++R + + L Y K+RE V + YTF VIK+ AG G +
Sbjct: 73 LWNSIIRA--FSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYE 130
Query: 235 LLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWE 294
++ GF L + +L+DMY + G + AR+VFDE RD+V W S+I+G++ + E
Sbjct: 131 QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190
Query: 295 ALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLV 354
AL+ + I P+S ++ +LP G K GQ +H + LK+ S + V + LV
Sbjct: 191 ALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVV-VNNGLV 249
Query: 355 DMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVV 414
MY K R A RVF E + R+ + + ++ GY+ +E+++R + + F+PD++
Sbjct: 250 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVR-MFLENLDQFKPDLL 308
Query: 415 TVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEM 474
TV++V+ C L+ L+ K I+ Y +K F+ ++ L+ +Y+KCG + + +F+ M
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Query: 475 EVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGK 534
E ++ +SW ++I I++G L +A+ +F+ M + + + D + ++SVS +L LK GK
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK 428
Query: 535 EIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEA-YGYN 593
+H +K V+ I MY CG + + +F ++ ++TW +I A +
Sbjct: 429 GLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFG 488
Query: 594 DLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSR-GYKIEALEE 652
D L + +MR P+ TF V L +C I + R GY+ E
Sbjct: 489 DFAT-GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIG 547
Query: 653 HYLIMIDILTRFGRIEEAHR-FREMS 677
+ L I++ ++ G +E + R F MS
Sbjct: 548 NAL--IEMYSKCGCLENSSRVFERMS 571
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 210/416 (50%), Gaps = 9/416 (2%)
Query: 216 VIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMY--FK--CGKIKLARRVFDET 271
+ ++ + +S L + + HAL+I G LID Y F+ + + RRV +
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRV---S 66
Query: 272 GDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQ 331
+++ +W S+I F+ N L EAL+ + + P+ ++ + ++G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 332 EVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSN 391
V+ +L + + +LFV ++LVDMY + + A +VF E R+ + W +L+SGY S+
Sbjct: 127 LVYEQIL-DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 392 GRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSII 451
G E+AL ++ PD TV++V+P L + G+ +H +A+K+ V +
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 452 TSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHR 511
L+ MY K + ++FDEM+VR+ +S+ MI ++ +++++ +F L + +
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFK 304
Query: 512 PDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLV 571
PD + ++ +L G L+ L L K I+ +LK F V I +Y CG + A+ V
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 572 FDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQ 627
F+++ K +++W +II Y + EA+ LF M +H T+ +L+S+ +
Sbjct: 365 FNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTR 420
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 275 bits (702), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 175/590 (29%), Positives = 307/590 (52%), Gaps = 7/590 (1%)
Query: 85 QNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGF- 143
KL+EA+ +L+ M + + V+ F AL+ C R+ EG +++ I ++ + + G
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYS-IALSSMSSLGVE 130
Query: 144 LRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRE 203
L + M+ G+ DA VF + S +++ WN L+ G G L++ M +
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM-LWV 189
Query: 204 LGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKL 263
GV+ +VYTF CV+++ G L +G + H +++ G+ + + +LI MY KCG +K
Sbjct: 190 GGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKS 249
Query: 264 ARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGE 323
AR +FD RDI+ W +MI+G+ N + E L+ M + P+ + LT ++
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309
Query: 324 AWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTA 383
R+LG+++HAYV+ ++ ++ V +SL MY A ++F E ++ + WT
Sbjct: 310 LGDRRLGRDIHAYVITTG-FAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTT 368
Query: 384 LMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQ 443
++SGY N ++A+ + M Q+ +PD +TVA V+ C+ L L+ G E+H A+K +
Sbjct: 369 MISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR 428
Query: 444 FLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFR 503
+ V + +L+ MYSKC +D +L +F + +NVISWT++I N R +AL R
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLR 488
Query: 504 SMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCG 563
M+++ +P+++ + L+ ++ AL GKEIH VL+ F+ + MY CG
Sbjct: 489 QMKMTL-QPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCG 547
Query: 564 FLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLS 623
+ A F++ K +W ++ Y + LFD+M P+ TF LL
Sbjct: 548 RMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLC 606
Query: 624 ICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRF 673
C+++ + F+ M Y + +HY ++D+L R G ++EAH+F
Sbjct: 607 GCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKF 655
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 204/430 (47%), Gaps = 6/430 (1%)
Query: 180 LRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKN 239
L G GK L N M+EL V ++ F +++ A +G K +++ + +
Sbjct: 66 LHGLCANGKLEEAMKLLN--SMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSS 123
Query: 240 GFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCA 299
+ L + + M+ + G + A VF + +R++ W ++ G+A EA+ C
Sbjct: 124 MSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAM-CL 182
Query: 300 --RWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMY 357
R + G+ P+ +L G G+EVH +V++ Y ++ V ++L+ MY
Sbjct: 183 YHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYG-YELDIDVVNALITMY 241
Query: 358 CKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVA 417
KC D+ SA +F R+ I W A++SGY NG + L M+ PD++T+
Sbjct: 242 VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLT 301
Query: 418 TVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVR 477
+VI C L G++IHAY + F ++S+ SL MY G + KLF ME +
Sbjct: 302 SVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK 361
Query: 478 NVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIH 537
+++SWT MI N D A+ +R M +PD + +A +LS L L G E+H
Sbjct: 362 DIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELH 421
Query: 538 GQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQ 597
+K S VA I MY C ++ A +F +P K I+WT+II N+ C
Sbjct: 422 KLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCF 481
Query: 598 EALSLFDKMR 607
EAL +M+
Sbjct: 482 EALIFLRQMK 491
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/517 (26%), Positives = 243/517 (47%), Gaps = 21/517 (4%)
Query: 82 FARQNKLKEALVILDYMDQ-QGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLEN 140
+A+Q EA+ + M G+ +V TF ++ C L G+ +H H+ G E
Sbjct: 170 YAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYEL 229
Query: 141 NGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMK 200
+ + L+ MY CG + A +FD + WNA++ G G LF
Sbjct: 230 DIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELF--FA 287
Query: 201 MRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGK 260
MR L V ++ T + VI + G HA +I GF + + SL MY G
Sbjct: 288 MRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGS 347
Query: 261 IKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPV 320
+ A ++F +DIV W +MI+G+ +N L +A+D R M ++ + P+ + + +L
Sbjct: 348 WREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSA 407
Query: 321 IGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEIL 380
G E+H +K R + V ++L++MY KC+ ++ A +F+ +N I
Sbjct: 408 CATLGDLDTGVELHKLAIK-ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS 466
Query: 381 WTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAV 440
WT++++G N R +AL + M+ +P+ +T+ + C+++ AL GKEIHA+ +
Sbjct: 467 WTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVL 525
Query: 441 K-----NQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRL 495
+ + FLPN +L+ MY +CG ++ + F+ + ++V SW ++ E G+
Sbjct: 526 RTGVGLDDFLPN-----ALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQG 579
Query: 496 DDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVA--A 553
+ +F M S+ RPD + +L + + ++ G ++ +D+ P + A
Sbjct: 580 SMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM--EDYGVTPNLKHYA 637
Query: 554 ENIKMYGMCGFLECAKLVFDAVPVK-GSITWTAIIEA 589
+ + G G L+ A +PV W A++ A
Sbjct: 638 CVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA 674
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 273 bits (699), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 179/606 (29%), Positives = 309/606 (50%), Gaps = 19/606 (3%)
Query: 82 FARQNKLKEALVILDYMDQQGIPVNVT--TFNALITACVRTRSLVEGRLIHTHIRINGLE 139
F N EAL+ M + N T+++ + AC T++L G+ +H H+ I L+
Sbjct: 80 FICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHL-IRCLQ 138
Query: 140 NNG-FLRTKLVKMYTSCGSFED------AEKVFDESSSESVYPWNALLRGAVIAGKKRYR 192
N+ + L+ MY SC + D KVFD ++V WN L+ V G+
Sbjct: 139 NSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEA 198
Query: 193 GVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNG--FVDYLILRTS 250
F M E V+ + +F V + + + ++ + + L++K G +V L + +S
Sbjct: 199 CRQFGIMMRME--VKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSS 256
Query: 251 LIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMI-REGIYP 309
I MY + G I+ +RRVFD +R+I VW +MI + N E+++ I + I
Sbjct: 257 AISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVS 316
Query: 310 NSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRV 369
+ V + + +LG++ H +V KN R + + +SL+ MY +C ++ ++ V
Sbjct: 317 DEVTYLLAASAVSALQQVELGRQFHGFVSKNFR-ELPIVIVNSLMVMYSRCGSVHKSFGV 375
Query: 370 FYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKAL 429
F ER+ + W ++S +V NG ++ L + MQ++GF+ D +TV ++ S L+
Sbjct: 376 FLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNK 435
Query: 430 NHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDE--MEVRNVISWTAMID 487
GK+ HA+ ++ Q + + + L+ MYSK G++ S KLF+ R+ +W +MI
Sbjct: 436 EIGKQTHAFLIR-QGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMIS 494
Query: 488 SCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFAS 547
+NG + VFR M RP++V +A +L Q+ ++ LGK++HG +++
Sbjct: 495 GYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQ 554
Query: 548 VPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMR 607
FVA+ + MY G ++ A+ +F + S+T+T +I YG + + + A+SLF M+
Sbjct: 555 NVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQ 614
Query: 608 NGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRI 667
G P+ TF +LS C+ +G DE +IF M Y I+ EHY + D+L R GR+
Sbjct: 615 ESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRV 674
Query: 668 EEAHRF 673
EA+ F
Sbjct: 675 NEAYEF 680
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/544 (25%), Positives = 254/544 (46%), Gaps = 25/544 (4%)
Query: 144 LRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRE 203
+R++L K+ G+ + A ++FD + WN ++ G + + ++ MK
Sbjct: 42 IRSRLSKICQD-GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTA 100
Query: 204 LGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFK------ 257
+ YT+S +K+ A L G H LI+ ++ SL++MY
Sbjct: 101 PFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPD 160
Query: 258 CGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTIL 317
C + + R+VFD +++V W ++I+ + EA M+R + P+ V +
Sbjct: 161 CFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNV 220
Query: 318 LPVIGEAWARKLGQEVHAYVLK-NERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEER 376
P + + + K + +LK + Y ++LFV SS + MY + D+ S+ RVF ER
Sbjct: 221 FPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVER 280
Query: 377 NEILWTALMSGYVSNGRLEQALR-SIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEI 435
N +W ++ YV N L +++ + + + D VT S L+ + G++
Sbjct: 281 NIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQF 340
Query: 436 HAYAVKN-QFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGR 494
H + KN + LP + I+ SLM+MYS+CG + S +F M R+V+SW MI + ++NG
Sbjct: 341 HGFVSKNFRELP-IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGL 399
Query: 495 LDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAE 554
D+ L + MQ + D + + +LS + L+ ++GK+ H ++++ + F
Sbjct: 400 DDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQ---GIQFEGMN 456
Query: 555 N--IKMYGMCGFLECAKLVFD--AVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGG 610
+ I MY G + ++ +F+ + TW ++I Y N ++ +F KM
Sbjct: 457 SYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQN 516
Query: 611 FTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLI---MIDILTRFGRI 667
PN T +L C+Q G D ++ R Y L+++ + ++D+ ++ G I
Sbjct: 517 IRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY----LDQNVFVASALVDMYSKAGAI 572
Query: 668 EEAH 671
+ A
Sbjct: 573 KYAE 576
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 96/213 (45%), Gaps = 13/213 (6%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
I + + ++ ++ M +Q I N T +++ AC + S+ G+ +H L
Sbjct: 493 ISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYL 552
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNY 198
+ N F+ + LV MY+ G+ + AE +F ++ + + ++ G G LF
Sbjct: 553 DQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLF-- 610
Query: 199 MKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTS-----LID 253
+ M+E G++ + TF V+ + + + + +GLK + + Y I +S + D
Sbjct: 611 LSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREV----YNIQPSSEHYCCITD 666
Query: 254 MYFKCGKIKLARRVFDETGDRDIV--VWGSMIA 284
M + G++ A G+ + +WGS++
Sbjct: 667 MLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLG 699
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 270 bits (690), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 168/597 (28%), Positives = 304/597 (50%), Gaps = 18/597 (3%)
Query: 89 KEALVI-LDYMDQQGIPVNVTTFNALITACVRTRSLVEGR------LIHTHIRINGLENN 141
+E+LV+ L++ + N ++ I AC S ++GR + + + +G + +
Sbjct: 127 EESLVVFLEFWRTRKDSPNEYILSSFIQAC----SGLDGRGRWMVFQLQSFLVKSGFDRD 182
Query: 142 GFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKM 201
++ T L+ Y G+ + A VFD +S W ++ G V G+ LF ++
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF--YQL 240
Query: 202 RELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKI 261
E V + Y S V+ + + L G + HA +++ G L LID Y KCG++
Sbjct: 241 MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRV 300
Query: 262 KLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVI 321
A ++F+ +++I+ W ++++G+ N L EA++ M + G+ P+ + +L
Sbjct: 301 IAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSC 360
Query: 322 GEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILW 381
A G +VHAY +K + +V +SL+DMY KC + A +VF + +L+
Sbjct: 361 ASLHALGFGTQVHAYTIK-ANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLF 419
Query: 382 TALMSGYVSNG---RLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAY 438
A++ GY G L +AL M+ RP ++T +++ + L +L K+IH
Sbjct: 420 NAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479
Query: 439 AVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDA 498
K ++ ++L+ +YS C L S +FDEM+V++++ W +M ++ ++A
Sbjct: 480 MFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEA 539
Query: 499 LGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKM 558
L +F +QLS+ RPD A M++ +G L +++LG+E H Q+LK+ P++ + M
Sbjct: 540 LNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDM 599
Query: 559 YGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTF 618
Y CG E A FD+ + + W ++I +Y + ++AL + +KM + G PN+ TF
Sbjct: 600 YAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITF 659
Query: 619 KVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRFRE 675
+LS C+ AG ++ + F +M R + IE EHY+ M+ +L R GR+ +A E
Sbjct: 660 VGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIE 715
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 150/561 (26%), Positives = 272/561 (48%), Gaps = 16/561 (2%)
Query: 128 LIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAG 187
++H I + GLE + +L L+ +Y+ G A KVF++ ++ W+ ++ G
Sbjct: 65 VVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHG 124
Query: 188 KKRYRGVLF-NYMKMRELGVQLNVYTFSCVIKSFAGASALMQGL--KTHALLIKNGFVDY 244
V+F + + R+ N Y S I++ +G + + + + L+K+GF
Sbjct: 125 IYEESLVVFLEFWRTRK--DSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRD 182
Query: 245 LILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIR 304
+ + T LID Y K G I AR VFD ++ V W +MI+G + +L ++
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 305 EGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEEL--FVRSSLVDMYCKCRD 362
+ + P+ +L+ +L + G+++HA++L RY E+ + + L+D Y KC
Sbjct: 243 DNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL---RYGLEMDASLMNVLIDSYVKCGR 299
Query: 363 MNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPV 422
+ +A ++F +N I WT L+SGY N ++A+ M + G +PD+ ++++
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 423 CSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISW 482
C+ L AL G ++HAY +K + + SL+ MY+KC L + K+FD +V+ +
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLF 419
Query: 483 TAMIDSCIENG---RLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQ 539
AMI+ G L +AL +FR M+ RP + +L S L +L L K+IHG
Sbjct: 420 NAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479
Query: 540 VLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEA 599
+ K F + I +Y C L+ ++LVFD + VK + W ++ Y +EA
Sbjct: 480 MFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEA 539
Query: 600 LSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIF-NVMSRGYKIEALEEHYLIMI 658
L+LF +++ P+ FTF +++ ++ RG + + L +
Sbjct: 540 LNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNAL--L 597
Query: 659 DILTRFGRIEEAHRFREMSSS 679
D+ + G E+AH+ + ++S
Sbjct: 598 DMYAKCGSPEDAHKAFDSAAS 618
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 201/418 (48%), Gaps = 4/418 (0%)
Query: 84 RQNKL-KEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNG 142
+QN L KEA+ + M + G+ ++ ++++T+C +L G +H + L N+
Sbjct: 326 KQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDS 385
Query: 143 FLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKK-RYRGVLFNYMKM 201
++ L+ MY C DA KVFD ++ V +NA++ G G + L + M
Sbjct: 386 YVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDM 445
Query: 202 RELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKI 261
R ++ ++ TF ++++ A ++L + H L+ K G + ++LID+Y C +
Sbjct: 446 RFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCL 505
Query: 262 KLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVI 321
K +R VFDE +D+V+W SM AG+ EAL+ + P+ ++
Sbjct: 506 KDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAA 565
Query: 322 GEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILW 381
G + +LGQE H +LK ++ ++L+DMY KC A + F R+ + W
Sbjct: 566 GNLASVQLGQEFHCQLLKRGLECNP-YITNALLDMYAKCGSPEDAHKAFDSAASRDVVCW 624
Query: 382 TALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVK 441
+++S Y ++G ++AL+ + M EG P+ +T V+ CS + G + ++
Sbjct: 625 NSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR 684
Query: 442 NQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVR-NVISWTAMIDSCIENGRLDDA 498
P ++ + + G L+ + +L ++M + I W +++ C + G ++ A
Sbjct: 685 FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELA 742
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 156/327 (47%), Gaps = 8/327 (2%)
Query: 74 AIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHI 133
A+ + R Q +L EAL I M + I ++ TF +L+ A SL + IH +
Sbjct: 421 AMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLM 480
Query: 134 RINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRG 193
GL + F + L+ +Y++C +D+ VFDE + + WN++ G V +
Sbjct: 481 FKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEAL 540
Query: 194 VLFNYMKM-RELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLI 252
LF +++ RE + + +TF+ ++ + +++ G + H L+K G + +L+
Sbjct: 541 NLFLELQLSRE---RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALL 597
Query: 253 DMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSV 312
DMY KCG + A + FD RD+V W S+I+ +A++ +AL M+ EGI PN +
Sbjct: 598 DMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYI 657
Query: 313 VLTILLPVIGEAWARKLGQEVHAYVLKNERYSE-ELFVRSSLVDMYCKCRDMNSAWRVFY 371
+L A + G + +L+ E E +V +V + + +N A +
Sbjct: 658 TFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYV--CMVSLLGRAGRLNKARELIE 715
Query: 372 ETEER-NEILWTALMSGYVSNGRLEQA 397
+ + I+W +L+SG G +E A
Sbjct: 716 KMPTKPAAIVWRSLLSGCAKAGNVELA 742
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 266 bits (681), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 171/560 (30%), Positives = 280/560 (50%), Gaps = 10/560 (1%)
Query: 113 LITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSES 172
L++ C SL R H + NGL + + TKLV +Y G +DA VFD+
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 173 VYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKT 232
Y W +LR + K V+ Y + + G + + FS +K+ L G K
Sbjct: 107 FYLWKVMLRCYCL--NKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
Query: 233 HALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLR 292
H L+K D ++L T L+DMY KCG+IK A +VF++ R++V W SMIAG+ N L
Sbjct: 165 HCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLC 223
Query: 293 WEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSS 352
E L M + N L+ + A G+ H ++K+ V +S
Sbjct: 224 EEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV-TS 282
Query: 353 LVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPD 412
L+DMY KC D+++A RVF E + ++WTA++ GY NG + +AL M+ +P+
Sbjct: 283 LLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPN 342
Query: 413 VVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFD 472
VT+A+V+ C ++ L G+ +H ++K + + ++ +L+ MY+KC + +F+
Sbjct: 343 CVTIASVLSGCGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFE 401
Query: 473 EMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKL 532
+++++W ++I +NG + +AL +F M P+ V +A + S L +L +
Sbjct: 402 MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV 461
Query: 533 GKEIHGQVLKKDF--ASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAY 590
G +H +K F +S V + Y CG + A+L+FD + K +ITW+A+I Y
Sbjct: 462 GSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGY 521
Query: 591 GYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEAL 650
G +L LF++M PN TF +LS C G +E + F+ M + Y
Sbjct: 522 GKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPS 581
Query: 651 EEHYLIMIDILTRFGRIEEA 670
+HY M+D+L R G +E+A
Sbjct: 582 TKHYTCMVDMLARAGELEQA 601
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 157/497 (31%), Positives = 246/497 (49%), Gaps = 12/497 (2%)
Query: 90 EALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTH-IRINGLENNGFLRTKL 148
E + + D + + G + F+ + AC + L G+ IH +++ +N + T L
Sbjct: 125 EVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDN--VVLTGL 182
Query: 149 VKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQL 208
+ MY CG + A KVF++ + +V W +++ G V VLFN +MRE V
Sbjct: 183 LDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFN--RMRENNVLG 240
Query: 209 NVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVF 268
N YT+ +I + SAL QG H L+K+G L TSL+DMY KCG I ARRVF
Sbjct: 241 NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVF 300
Query: 269 DETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARK 328
+E D+V+W +MI G+ HN EAL + M I PN V + +L G +
Sbjct: 301 NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLE 360
Query: 329 LGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGY 388
LG+ VH +K + V ++LV MY KC A VF E++ + W +++SG+
Sbjct: 361 LGRSVHGLSIKVGIWDTN--VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGF 418
Query: 389 VSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLP-- 446
NG + +AL M E P+ VTVA++ C+ L +L G +HAY+VK FL
Sbjct: 419 SQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASS 478
Query: 447 NVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQ 506
+V + T+L+ Y+KCG + +FD +E +N I+W+AMI + G +L +F M
Sbjct: 479 SVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEML 538
Query: 507 LSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAEN--IKMYGMCGF 564
+ +P+ +LS G + GK+ + KD+ P + M G
Sbjct: 539 KKQQKPNESTFTSILSACGHTGMVNEGKKYFSS-MYKDYNFTPSTKHYTCMVDMLARAGE 597
Query: 565 LECAKLVFDAVPVKGSI 581
LE A + + +P++ +
Sbjct: 598 LEQALDIIEKMPIQPDV 614
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 212/439 (48%), Gaps = 7/439 (1%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
I + + + +E LV+ + M + + N T+ LI AC + +L +G+ H + +G+
Sbjct: 214 IAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGI 273
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNY 198
E + L T L+ MY CG +A +VF+E S + W A++ G G LF
Sbjct: 274 ELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQ- 332
Query: 199 MKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKC 258
KM+ + ++ N T + V+ L G H L IK G D + +L+ MY KC
Sbjct: 333 -KMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNV-ANALVHMYAKC 390
Query: 259 GKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILL 318
+ + A+ VF+ ++DIV W S+I+GF+ N EAL M E + PN V + L
Sbjct: 391 YQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLF 450
Query: 319 PVIGEAWARKLGQEVHAYVLK-NERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERN 377
+ +G +HAY +K S + V ++L+D Y KC D SA +F EE+N
Sbjct: 451 SACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKN 510
Query: 378 EILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHA 437
I W+A++ GY G +L M ++ +P+ T +++ C +N GK+ +
Sbjct: 511 TITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFS 570
Query: 438 YAVKN-QFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVR-NVISWTAMIDSCIENGRL 495
K+ F P+ T ++ M ++ G L+ +L + ++M ++ +V + A + C + R
Sbjct: 571 SMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRF 630
Query: 496 DDALGVFRSMQLSKHRPDS 514
D V + M L H D+
Sbjct: 631 DLGEIVIKKM-LDLHPDDA 648
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 104/228 (45%), Gaps = 7/228 (3%)
Query: 69 EKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRL 128
EK+ A I F++ + EAL + M+ + + N T +L +AC SL G
Sbjct: 405 EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSS 464
Query: 129 IHTH-IRINGLENNGF-LRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIA 186
+H + +++ L ++ + T L+ Y CG + A +FD ++ W+A++ G
Sbjct: 465 LHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQ 524
Query: 187 GKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKN-GFVDYL 245
G LF M ++ + N TF+ ++ + + +G K + + K+ F
Sbjct: 525 GDTIGSLELFEEMLKKQ--QKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPST 582
Query: 246 ILRTSLIDMYFKCGKIKLARRVFDETGDR-DIVVWGSMIAGFA-HNRL 291
T ++DM + G+++ A + ++ + D+ +G+ + G H+R
Sbjct: 583 KHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRF 630
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 266 bits (680), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 155/490 (31%), Positives = 251/490 (51%), Gaps = 3/490 (0%)
Query: 190 RYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRT 249
+Y +L + M E V+ + TF ++ + +L G + H + +K G L +
Sbjct: 295 QYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSN 354
Query: 250 SLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYP 309
SLI+MY K K AR VFD +RD++ W S+IAG A N L EA+ ++R G+ P
Sbjct: 355 SLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKP 414
Query: 310 NSVVLTILLPVIGE-AWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWR 368
+ +T +L L ++VH + +K S+ FV ++L+D Y + R M A
Sbjct: 415 DQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS-FVSTALIDAYSRNRCMKEA-E 472
Query: 369 VFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKA 428
+ +E + + W A+M+GY + + L+ A M ++G R D T+ATV C L A
Sbjct: 473 ILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFA 532
Query: 429 LNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDS 488
+N GK++HAYA+K+ + ++ + + ++ MY KCG + + FD + V + ++WT MI
Sbjct: 533 INQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISG 592
Query: 489 CIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASV 548
CIENG + A VF M+L PD +A + S L AL+ G++IH LK + +
Sbjct: 593 CIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTND 652
Query: 549 PFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRN 608
PFV + MY CG ++ A +F + + W A++ + +E L LF +M++
Sbjct: 653 PFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKS 712
Query: 609 GGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIE 668
G P+ TF +LS C+ +G EA + M Y I+ EHY + D L R G ++
Sbjct: 713 LGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVK 772
Query: 669 EAHRFREMSS 678
+A E S
Sbjct: 773 QAENLIESMS 782
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 227/450 (50%), Gaps = 15/450 (3%)
Query: 98 MDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGS 157
M + + + TF ++ V+ SL G+ +H GL+ + L+ MY
Sbjct: 306 MVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRK 365
Query: 158 FEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVI 217
F A VFD S + WN+++ G G + LF M++ G++ + YT + V+
Sbjct: 366 FGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF--MQLLRCGLKPDQYTMTSVL 423
Query: 218 KSFAGASALMQGL----KTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGD 273
K+ AS+L +GL + H IK V + T+LID Y + +K A +F E +
Sbjct: 424 KA---ASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHN 479
Query: 274 RDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEV 333
D+V W +M+AG+ + + L M ++G + L + G +A G++V
Sbjct: 480 FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQV 539
Query: 334 HAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGR 393
HAY +K+ Y +L+V S ++DMY KC DM++A F +++ WT ++SG + NG
Sbjct: 540 HAYAIKS-GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGE 598
Query: 394 LEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITS 453
E+A + M+ G PD T+AT+ S L AL G++IHA A+K + + TS
Sbjct: 599 EERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTS 658
Query: 454 LMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPD 513
L+ MY+KCG +D + LF +E+ N+ +W AM+ ++G + L +F+ M+ +PD
Sbjct: 659 LVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPD 718
Query: 514 SVAMARMLSV---SGQL-KALKLGKEIHGQ 539
V +LS SG + +A K + +HG
Sbjct: 719 KVTFIGVLSACSHSGLVSEAYKHMRSMHGD 748
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/535 (22%), Positives = 233/535 (43%), Gaps = 37/535 (6%)
Query: 88 LKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTK 147
+++A ++ + Q + + T + ++ C+ + + H + GL+ + F+
Sbjct: 126 IQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGA 185
Query: 148 LVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQ 207
LV +Y G ++ + +F+E V WN +L+ + E+G +
Sbjct: 186 LVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYL------------------EMGFK 227
Query: 208 LNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRV 267
S S GL + + ++ L+ R S D G++K
Sbjct: 228 EEAIDLSSAFHS--------SGLNPNEITLR------LLARISGDDS--DAGQVKSFANG 271
Query: 268 FDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWAR 327
D + +I+ ++ + H+ L C M+ + + V ++L + +
Sbjct: 272 NDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSL 331
Query: 328 KLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSG 387
LGQ+VH LK L V +SL++MYCK R A VF ER+ I W ++++G
Sbjct: 332 ALGQQVHCMALK-LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAG 390
Query: 388 YVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQL-KALNHGKEIHAYAVKNQFLP 446
NG +A+ + + G +PD T+ +V+ S L + L+ K++H +A+K +
Sbjct: 391 IAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVS 450
Query: 447 NVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQ 506
+ + T+L+ YS+ + + LF+ ++++W AM+ ++ L +F M
Sbjct: 451 DSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMH 509
Query: 507 LSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLE 566
R D +A + G L A+ GK++H +K + +V++ + MY CG +
Sbjct: 510 KQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMS 569
Query: 567 CAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVL 621
A+ FD++PV + WT +I N + A +F +MR G P+ FT L
Sbjct: 570 AAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATL 624
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/501 (23%), Positives = 217/501 (43%), Gaps = 40/501 (7%)
Query: 131 THIRINGLENNG--FLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGK 188
TH RI E N FL L+ MY+ CGS A +VFD+ + WN++L + +
Sbjct: 61 THARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSE 120
Query: 189 ---KRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYL 245
+ + + +R+ V + T S ++K + + H K G
Sbjct: 121 CVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDE 180
Query: 246 ILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIRE 305
+ +L+++Y K GK+K + +F+E RD+V+W M+ + + EA+D +
Sbjct: 181 FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSS 240
Query: 306 GIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNS 365
G+ PN + L +L AR G + A +K+ + D +S
Sbjct: 241 GLNPNEITLRLL--------ARISGDDSDAGQVKS----------------FANGNDASS 276
Query: 366 AWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQ 425
+ + RN+ L S Y+ +G+ L+ A M + D VT ++ +
Sbjct: 277 VSEIIF----RNKGL-----SEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVK 327
Query: 426 LKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAM 485
+ +L G+++H A+K +++ SL+ MY K ++ +FD M R++ISW ++
Sbjct: 328 VDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSV 387
Query: 486 IDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQL-KALKLGKEIHGQVLKKD 544
I +NG +A+ +F + +PD M +L + L + L L K++H +K +
Sbjct: 388 IAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKIN 447
Query: 545 FASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFD 604
S FV+ I Y ++ A+++F+ + W A++ Y + + L LF
Sbjct: 448 NVSDSFVSTALIDAYSRNRCMKEAEILFERHNFD-LVAWNAMMAGYTQSHDGHKTLKLFA 506
Query: 605 KMRNGGFTPNHFTFKVLLSIC 625
M G + FT + C
Sbjct: 507 LMHKQGERSDDFTLATVFKTC 527
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 21/206 (10%)
Query: 432 GKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMI----- 486
GK HA + + P +I +L+ MYSKCG L Y+ ++FD+M R+++SW +++
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 487 --DSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLK-ALKLG-----KEIHG 538
+ +EN + A +FR + R D V +RM ++S LK L G + HG
Sbjct: 118 SSECVVEN--IQQAFLLFRIL-----RQDVVYTSRM-TLSPMLKLCLHSGYVWASESFHG 169
Query: 539 QVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQE 598
K FVA + +Y G ++ K++F+ +P + + W +++AY +E
Sbjct: 170 YACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEE 229
Query: 599 ALSLFDKMRNGGFTPNHFTFKVLLSI 624
A+ L + G PN T ++L I
Sbjct: 230 AIDLSSAFHSSGLNPNEITLRLLARI 255
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 7/153 (4%)
Query: 530 LKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEA 589
L LGK H ++L + F+ I MY CG L A+ VFD +P + ++W +I+ A
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 590 YGYNDLC-----QEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRG 644
Y + C Q+A LF +R + T +L +C +G+ A F+ +
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV-WASESFHGYACK 173
Query: 645 YKIEALEEHYLIMIDILTRFGRIEEAH-RFREM 676
++ E +++I +FG+++E F EM
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEM 206
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 266 bits (680), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 158/515 (30%), Positives = 270/515 (52%), Gaps = 7/515 (1%)
Query: 160 DAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKS 219
DA ++F E + S+Y WN LL+ ++ +K++ VL+++ M + + +T +K+
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKS--LSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKA 69
Query: 220 FAGASALMQGLKTHALLIKN-GFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVV 278
+ G H + K+ L + +SLI MY KCG++ A R+FDE DIV
Sbjct: 70 CGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT 129
Query: 279 WGSMIAGFAHNRLRWEALDCARWMI-REGIYPNSVVLTILLPVIGEAWARKLGQEVHAYV 337
W SM++GF N ++A++ R M+ + P+ V L L+ + +LG+ VH +V
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 338 LKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQA 397
++ +S +L + +SL++ Y K R A +F E++ I W+ +++ YV NG +A
Sbjct: 190 IR-RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEA 248
Query: 398 LRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIM 457
L M +G P+V TV V+ C+ L G++ H A++ V + T+L+ M
Sbjct: 249 LLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDM 308
Query: 458 YSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKH-RPDSVA 516
Y KC + + +F + ++V+SW A+I NG ++ F M L + RPD++
Sbjct: 309 YMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAIL 368
Query: 517 MARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVP 576
M ++L +L L+ K H V+K F S PF+ A +++Y CG L A VF+ +
Sbjct: 369 MVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA 428
Query: 577 VKGSITWTAIIEAYGYNDLCQEALSLFDKM-RNGGFTPNHFTFKVLLSICNQAGFADEAC 635
+K ++ WT++I YG + +AL F+ M ++ PN TF +LS C+ AG E
Sbjct: 429 LKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGL 488
Query: 636 RIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEA 670
RIF +M Y++ EHY +++D+L R G ++ A
Sbjct: 489 RIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTA 523
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/516 (25%), Positives = 242/516 (46%), Gaps = 11/516 (2%)
Query: 69 EKNPRAIYK---DIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVE 125
E R++Y+ ++ +R+ + +E L +M + + T + AC R +
Sbjct: 19 EMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNY 78
Query: 126 GRLIHTHIRIN-GLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAV 184
G +IH ++ + L ++ ++ + L+ MY CG +A ++FDE + W++++ G
Sbjct: 79 GEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFE 138
Query: 185 IAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDY 244
G Y+ V F + V + T ++ + S G H +I+ GF +
Sbjct: 139 KNGSP-YQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSND 197
Query: 245 LILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIR 304
L L SL++ Y K K A +F ++D++ W ++IA + N EAL M+
Sbjct: 198 LSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMD 257
Query: 305 EGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMN 364
+G PN + +L A + G++ H ++ + E+ V ++LVDMY KC
Sbjct: 258 DGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIR-KGLETEVKVSTALVDMYMKCFSPE 316
Query: 365 SAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQE-GFRPDVVTVATVIPVC 423
A+ VF ++ + W AL+SG+ NG +++ + M E RPD + + V+ C
Sbjct: 317 EAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSC 376
Query: 424 SQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWT 483
S+L L K H+Y +K F N I SL+ +YS+CG L + K+F+ + +++ + WT
Sbjct: 377 SELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWT 436
Query: 484 AMIDSCIENGRLDDALGVFRSM-QLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLK 542
++I +G+ AL F M + S+ +P+ V +LS + G I +++
Sbjct: 437 SLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIF-KLMV 495
Query: 543 KDFASVPFVA--AENIKMYGMCGFLECAKLVFDAVP 576
D+ P + A + + G G L+ A + +P
Sbjct: 496 NDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMP 531
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 140/320 (43%), Gaps = 2/320 (0%)
Query: 51 HTKKSAEKDAFPSSLPLHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTF 110
+ K A K+A + EK+ + I + + EAL++ + M G NV T
Sbjct: 208 YAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATV 267
Query: 111 NALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSS 170
++ AC L +GR H GLE + T LV MY C S E+A VF
Sbjct: 268 LCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPR 327
Query: 171 ESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGL 230
+ V W AL+ G + G F+ M + E + + V+ S + L Q
Sbjct: 328 KDVVSWVALISGFTLNGMAHRSIEEFSIM-LLENNTRPDAILMVKVLGSCSELGFLEQAK 386
Query: 231 KTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNR 290
H+ +IK GF + SL+++Y +CG + A +VF+ +D VVW S+I G+ +
Sbjct: 387 CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHG 446
Query: 291 LRWEALDCARWMIREG-IYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFV 349
+AL+ M++ + PN V +L A G + ++ + R + L
Sbjct: 447 KGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEH 506
Query: 350 RSSLVDMYCKCRDMNSAWRV 369
+ LVD+ + D+++A +
Sbjct: 507 YAVLVDLLGRVGDLDTAIEI 526
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 265 bits (678), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 165/568 (29%), Positives = 287/568 (50%), Gaps = 12/568 (2%)
Query: 109 TFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDES 168
T+++++ AC L G+++ + G E+ F+ T +V +Y CG +A +VF
Sbjct: 253 TYSSVLAACASLEKLRFGKVVQARVIKCGAEDV-FVCTAIVDLYAKCGHMAEAMEVFSRI 311
Query: 169 SSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQ 228
+ SV W +L G + +F +MR GV++N T + VI + S + +
Sbjct: 312 PNPSVVSWTVMLSGYTKSNDAFSALEIFK--EMRHSGVEINNCTVTSVISACGRPSMVCE 369
Query: 229 GLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGD---RDIVVWGSMIAG 285
+ HA + K+GF + +LI MY K G I L+ +VF++ D ++IV MI
Sbjct: 370 ASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITS 427
Query: 286 FAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSE 345
F+ ++ +A+ M++EG+ + + LL V+ LG++VH Y LK+
Sbjct: 428 FSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLD---CLNLGKQVHGYTLKS-GLVL 483
Query: 346 ELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQ 405
+L V SSL +Y KC + ++++F ++ W +++SG+ G L +A+ + M
Sbjct: 484 DLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEML 543
Query: 406 QEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLD 465
+G PD T+A V+ VCS +L GKEIH Y ++ + + ++L+ MYSKCG L
Sbjct: 544 DDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLK 603
Query: 466 YSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSG 525
+ +++D + + +S +++I ++G + D +FR M +S DS A++ +L +
Sbjct: 604 LARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAA 663
Query: 526 QLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTA 585
LG ++H + K + P V + + MY G ++ F + I WTA
Sbjct: 664 LSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTA 723
Query: 586 IIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGY 645
+I +Y + EAL +++ M+ GF P+ TF +LS C+ G +E+ N M + Y
Sbjct: 724 LIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDY 783
Query: 646 KIEALEEHYLIMIDILTRFGRIEEAHRF 673
IE HY+ M+D L R GR+ EA F
Sbjct: 784 GIEPENRHYVCMVDALGRSGRLREAESF 811
Score = 239 bits (610), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 163/595 (27%), Positives = 296/595 (49%), Gaps = 15/595 (2%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
I + + +E+L M G N ++ ++I+AC ++ + L+ H G
Sbjct: 122 ISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGY 181
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNY 198
+ + L+ +++ FEDA KVF +S S +VY WN ++ GA+ + + G +F+
Sbjct: 182 FFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGAL---RNQNYGAVFDL 238
Query: 199 MKMRELGVQ-LNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFK 257
+G Q + YT+S V+ + A L G A +IK G D + T+++D+Y K
Sbjct: 239 FHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVC-TAIVDLYAK 297
Query: 258 CGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTIL 317
CG + A VF + +V W M++G+ + + AL+ + M G+ N+ +T +
Sbjct: 298 CGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSV 357
Query: 318 LPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEE-R 376
+ G +VHA+V K+ Y + V ++L+ MY K D++ + +VF + ++ +
Sbjct: 358 ISACGRPSMVCEASQVHAWVFKSGFYLDSS-VAAALISMYSKSGDIDLSEQVFEDLDDIQ 416
Query: 377 NEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIH 436
+ + +++ + + + +A+R M QEG R D +V +++ V L LN GK++H
Sbjct: 417 RQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVH 473
Query: 437 AYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLD 496
Y +K+ + ++++ +SL +YSKCG L+ S KLF + ++ W +MI E G L
Sbjct: 474 GYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLR 533
Query: 497 DALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENI 556
+A+G+F M PD +A +L+V +L GKEIHG L+ + + +
Sbjct: 534 EAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALV 593
Query: 557 KMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHF 616
MY CG L+ A+ V+D +P ++ +++I Y + L Q+ LF M GFT + F
Sbjct: 594 NMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSF 653
Query: 617 TFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYL--IMIDILTRFGRIEE 669
SI A +DE+ V + KI E + ++ + ++FG I++
Sbjct: 654 AIS---SILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDD 705
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 220/471 (46%), Gaps = 6/471 (1%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
+ + + N AL I M G+ +N T ++I+AC R + E +H + +G
Sbjct: 323 LSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF 382
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNY 198
+ + L+ MY+ G + +E+VF++ ++ + KK + + +
Sbjct: 383 YLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRL-F 441
Query: 199 MKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKC 258
+M + G++ + ++ ++ L G + H +K+G V L + +SL +Y KC
Sbjct: 442 TRMLQEGLRTDEFSVCSLLSVL---DCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKC 498
Query: 259 GKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILL 318
G ++ + ++F +D W SMI+GF EA+ M+ +G P+ L +L
Sbjct: 499 GSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVL 558
Query: 319 PVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNE 378
V + G+E+H Y L+ + + + S+LV+MY KC + A +V+ E +
Sbjct: 559 TVCSSHPSLPRGKEIHGYTLR-AGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDP 617
Query: 379 ILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAY 438
+ ++L+SGY +G ++ M GF D +++++ + + G ++HAY
Sbjct: 618 VSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAY 677
Query: 439 AVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDA 498
K S+ +SL+ MYSK G +D K F ++ ++I+WTA+I S ++G+ ++A
Sbjct: 678 ITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEA 737
Query: 499 LGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVP 549
L V+ M+ +PD V +LS L H + KD+ P
Sbjct: 738 LQVYNLMKEKGFKPDKVTFVGVLSACSH-GGLVEESYFHLNSMVKDYGIEP 787
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 175/381 (45%), Gaps = 3/381 (0%)
Query: 245 LILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIR 304
+ L SL+ Y G + A ++FD D+V MI+G+ +RL E+L M
Sbjct: 84 VFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF 143
Query: 305 EGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMN 364
G N + ++ A + V + +K + E+ V S+L+D++ K
Sbjct: 144 LGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEV-VESALIDVFSKNLRFE 202
Query: 365 SAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCS 424
A++VF ++ N W +++G + N M +PD T ++V+ C+
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
Query: 425 QLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTA 484
L+ L GK + A +K +V + T+++ +Y+KCG + ++++F + +V+SWT
Sbjct: 263 SLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTV 321
Query: 485 MIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKD 544
M+ ++ AL +F+ M+ S ++ + ++S G+ + ++H V K
Sbjct: 322 MLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSG 381
Query: 545 FASVPFVAAENIKMYGMCGFLECAKLVF-DAVPVKGSITWTAIIEAYGYNDLCQEALSLF 603
F VAA I MY G ++ ++ VF D ++ +I ++ + +A+ LF
Sbjct: 382 FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLF 441
Query: 604 DKMRNGGFTPNHFTFKVLLSI 624
+M G + F+ LLS+
Sbjct: 442 TRMLQEGLRTDEFSVCSLLSV 462
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 143/305 (46%), Gaps = 1/305 (0%)
Query: 333 VHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNG 392
+ A++L+ ++F+ SL+ Y M A ++F + + + ++SGY +
Sbjct: 70 LQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHR 129
Query: 393 RLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIIT 452
E++LR + M GF + ++ +VI CS L+A + + + +K + + +
Sbjct: 130 LFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVES 189
Query: 453 SLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRP 512
+L+ ++SK + + K+F + NV W +I + N +F M + +P
Sbjct: 190 ALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKP 249
Query: 513 DSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVF 572
DS + +L+ L+ L+ GK + +V+K V FV + +Y CG + A VF
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDV-FVCTAIVDLYAKCGHMAEAMEVF 308
Query: 573 DAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFAD 632
+P ++WT ++ Y ++ AL +F +MR+ G N+ T ++S C +
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVC 368
Query: 633 EACRI 637
EA ++
Sbjct: 369 EASQV 373
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 97/226 (42%), Gaps = 14/226 (6%)
Query: 67 LHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEG 126
L E +P + I +++ +++ ++ M G ++ ++++ A + G
Sbjct: 612 LPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLG 671
Query: 127 RLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIA 186
+H +I GL + + L+ MY+ GS +D K F + + + W AL+
Sbjct: 672 AQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQH 731
Query: 187 GKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFV-DYL 245
GK ++N MK E G + + TF V+ + + GL + N V DY
Sbjct: 732 GKANEALQVYNLMK--EKGFKPDKVTFVGVLSACSHG-----GLVEESYFHLNSMVKDYG 784
Query: 246 ILRTS-----LIDMYFKCGKIKLARRVFDETGDR-DIVVWGSMIAG 285
I + ++D + G+++ A + + D +VWG+++A
Sbjct: 785 IEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAA 830
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 263 bits (673), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 173/577 (29%), Positives = 284/577 (49%), Gaps = 11/577 (1%)
Query: 109 TFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDES 168
T+ +I AC + G +H + GL + F+ LV Y + G DA ++FD
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 248
Query: 169 SSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELG---VQLNVYTFSCVIKSFAGASA 225
++ WN+++R G +L M M E G +V T V+ A
Sbjct: 249 PERNLVSWNSMIRVFSDNGFSEESFLLLGEM-MEENGDGAFMPDVATLVTVLPVCARERE 307
Query: 226 LMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAG 285
+ G H +K L+L +L+DMY KCG I A+ +F ++++V W +M+ G
Sbjct: 308 IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 367
Query: 286 FAHNRLRWEALDCARWMIREG--IYPNSVVLTILLPV-IGEAWARKLGQEVHAYVLKNER 342
F+ D R M+ G + + V + +PV E++ L +E+H Y LK E
Sbjct: 368 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL-KELHCYSLKQEF 426
Query: 343 YSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIA 402
EL V ++ V Y KC ++ A RVF+ + W AL+ G+ + +L +
Sbjct: 427 VYNEL-VANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 485
Query: 403 WMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCG 462
M+ G PD TV +++ CS+LK+L GKE+H + ++N ++ + S++ +Y CG
Sbjct: 486 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 545
Query: 463 VLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLS 522
L LFD ME ++++SW +I ++NG D ALGVFR M L + ++M +
Sbjct: 546 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 605
Query: 523 VSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSIT 582
L +L+LG+E H LK F+A I MY G + + VF+ + K + +
Sbjct: 606 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 665
Query: 583 WTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMS 642
W A+I YG + L +EA+ LF++M+ G P+ TF +L+ CN +G E R + M
Sbjct: 666 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 725
Query: 643 RGYKIEALEEHYLIMIDILTRFGRIEEAHRF--REMS 677
+ ++ +HY +ID+L R G++++A R EMS
Sbjct: 726 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMS 762
Score = 235 bits (599), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/502 (29%), Positives = 255/502 (50%), Gaps = 11/502 (2%)
Query: 113 LITACVRTRSLVEGRLIHTHIRING-LENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSE 171
L+ A + + + GR IH + + L N+ L T+++ MY CGS +D+ VFD S+
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 172 SVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQL-NVYTFSCVIKSFAGASALMQGL 230
+++ WNA++ + + + Y VL +++M L + +T+ CVIK+ AG S + GL
Sbjct: 150 NLFQWNAVI--SSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGL 207
Query: 231 KTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNR 290
H L++K G V+ + + +L+ Y G + A ++FD +R++V W SMI F+ N
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 291 LRWEALDCARWMIRE----GIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEE 346
E+ M+ E P+ L +LPV LG+ VH + +K R +E
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK-LRLDKE 326
Query: 347 LFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQ 406
L + ++L+DMY KC + +A +F +N + W ++ G+ + G + M
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386
Query: 407 EG--FRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVL 464
G + D VT+ +PVC L KE+H Y++K +F+ N + + + Y+KCG L
Sbjct: 387 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 446
Query: 465 DYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVS 524
Y+ ++F + + V SW A+I ++ +L M++S PDS + +LS
Sbjct: 447 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 506
Query: 525 GQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWT 584
+LK+L+LGKE+HG +++ FV + +Y CG L + +FDA+ K ++W
Sbjct: 507 SKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWN 566
Query: 585 AIIEAYGYNDLCQEALSLFDKM 606
+I Y N AL +F +M
Sbjct: 567 TVITGYLQNGFPDRALGVFRQM 588
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 187/390 (47%), Gaps = 15/390 (3%)
Query: 107 VTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFD 166
VT NA + C L + +H + N + V Y CGS A++VF
Sbjct: 396 VTILNA-VPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFH 454
Query: 167 ESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASAL 226
S++V WNAL+ G + R L +++M+ G+ + +T ++ + + +L
Sbjct: 455 GIRSKTVNSWNALIGGHAQSNDPRLS--LDAHLQMKISGLLPDSFTVCSLLSACSKLKSL 512
Query: 227 MQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGF 286
G + H +I+N L + S++ +Y CG++ + +FD D+ +V W ++I G+
Sbjct: 513 RLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGY 572
Query: 287 AHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAW---ARKLGQEVHAYVLKNERY 343
N AL R M+ GI + ++PV G + +LG+E HAY LK+
Sbjct: 573 LQNGFPDRALGVFRQMVLYGIQLCGIS---MMPVFGACSLLPSLRLGREAHAYALKH-LL 628
Query: 344 SEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAW 403
++ F+ SL+DMY K + + +VF +E++ W A++ GY +G ++A++
Sbjct: 629 EDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEE 688
Query: 404 MQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQF--LPNVSIITSLMIMYSKC 461
MQ+ G PD +T V+ C+ ++ G + +K+ F PN+ ++ M +
Sbjct: 689 MQRTGHNPDDLTFLGVLTACNHSGLIHEGLR-YLDQMKSSFGLKPNLKHYACVIDMLGRA 747
Query: 462 GVLDYSLKLFDE--MEVRNVISWTAMIDSC 489
G LD +L++ E E +V W +++ SC
Sbjct: 748 GQLDKALRVVAEEMSEEADVGIWKSLLSSC 777
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 132/302 (43%), Gaps = 5/302 (1%)
Query: 314 LTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYET 373
L +LL G+ ++G+++H V + R + + + ++ MY C + + VF
Sbjct: 87 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 146
Query: 374 EERNEILWTALMSGYVSNGRLEQALRS-IAWMQQEGFRPDVVTVATVIPVCSQLKALNHG 432
+N W A++S Y N ++ L + I + PD T VI C+ + + G
Sbjct: 147 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 206
Query: 433 KEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIEN 492
+H VK + +V + +L+ Y G + +L+LFD M RN++SW +MI +N
Sbjct: 207 LAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDN 266
Query: 493 GRLDDALGVFRSMQLSK----HRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASV 548
G +++ + M PD + +L V + + + LGK +HG +K
Sbjct: 267 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKE 326
Query: 549 PFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRN 608
+ + MY CG + A+++F K ++W ++ + + +M
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386
Query: 609 GG 610
GG
Sbjct: 387 GG 388
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 137/297 (46%), Gaps = 16/297 (5%)
Query: 98 MDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGS 157
M G+ + T +L++AC + +SL G+ +H I N LE + F+ ++ +Y CG
Sbjct: 487 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 546
Query: 158 FEDAEKVFDESSSESVYPWNALLRGAVIAG-KKRYRGVLFNYMKMRELGVQLNVYTFSCV 216
+ +FD +S+ WN ++ G + G R GV + +M G+QL + V
Sbjct: 547 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGV---FRQMVLYGIQLCGISMMPV 603
Query: 217 IKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDI 276
+ + +L G + HA +K+ D + SLIDMY K G I + +VF+ ++
Sbjct: 604 FGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST 663
Query: 277 VVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEA-----WARKLGQ 331
W +MI G+ + L EA+ M R G P+ + +L + R L Q
Sbjct: 664 ASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQ 723
Query: 332 EVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYE--TEERNEILWTALMS 386
++ LK L + ++DM + ++ A RV E +EE + +W +L+S
Sbjct: 724 MKSSFGLK-----PNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 12/123 (9%)
Query: 516 AMARMLSVSGQLKALKLGKEIHGQV-----LKKDFASVPFVAAENIKMYGMCGFLECAKL 570
A+ +L SG+ K +++G++IH V L+ D + I MY MCG + ++
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRND----DVLCTRIITMYAMCGSPDDSRF 141
Query: 571 VFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKM-RNGGFTPNHFTFKVLLSICNQAG 629
VFDA+ K W A+I +Y N+L E L F +M P+HFT+ ++ C AG
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC--AG 199
Query: 630 FAD 632
+D
Sbjct: 200 MSD 202
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 11/265 (4%)
Query: 85 QNKLKE-ALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGF 143
QN + AL + M GI + + + AC SL GR H + + LE++ F
Sbjct: 574 QNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAF 633
Query: 144 LRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRE 203
+ L+ MY GS + KVF+ +S WNA++ G I G + LF +M+
Sbjct: 634 IACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFE--EMQR 691
Query: 204 LGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKN-GFVDYLILRTSLIDMYFKCGKIK 262
G + TF V+ + + + +GL+ + + G L +IDM + G++
Sbjct: 692 TGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLD 751
Query: 263 LARRVFDE--TGDRDIVVWGSMIAGF-AHNRLRWEALDCARWMIREGIYP-NSVVLTILL 318
A RV E + + D+ +W S+++ H L A+ E P N V+L+ L
Sbjct: 752 KALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLY 811
Query: 319 PVIGEAW--ARKLGQEVHAYVLKNE 341
+G+ W RK+ Q ++ L+ +
Sbjct: 812 AGLGK-WEDVRKVRQRMNEMSLRKD 835
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 261 bits (668), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 165/581 (28%), Positives = 283/581 (48%), Gaps = 7/581 (1%)
Query: 98 MDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGS 157
M + + +T ++++A +L G ++H GL +N ++ + LV MY+ C
Sbjct: 318 MRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEK 377
Query: 158 FEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVI 217
E A KVF+ ++ WNA++RG G+ V+ +M M+ G ++ +TF+ ++
Sbjct: 378 MEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHK--VMELFMDMKSSGYNIDDFTFTSLL 435
Query: 218 KSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIV 277
+ A + L G + H+++IK L + +L+DMY KCG ++ AR++F+ DRD V
Sbjct: 436 STCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV 495
Query: 278 VWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYV 337
W ++I + + EA D + M GI + L L G++VH
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLS 555
Query: 338 LKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQA 397
+K +L SSL+DMY KC + A +VF E + + AL++GY N LE+A
Sbjct: 556 VKC-GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEA 613
Query: 398 LRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSII-TSLMI 456
+ M G P +T AT++ C + ++L G + H K F + SL+
Sbjct: 614 VVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLG 673
Query: 457 MYSKCGVLDYSLKLFDEMEV-RNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSV 515
MY + + LF E+ ++++ WT M+ +NG ++AL ++ M+ PD
Sbjct: 674 MYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQA 733
Query: 516 AMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAV 575
+L V L +L+ G+ IH + + I MY CG ++ + VFD +
Sbjct: 734 TFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793
Query: 576 PVKGS-ITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEA 634
+ + ++W ++I Y N ++AL +FD MR P+ TF +L+ C+ AG +
Sbjct: 794 RRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDG 853
Query: 635 CRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRFRE 675
+IF +M Y IEA +H M+D+L R+G ++EA F E
Sbjct: 854 RKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIE 894
Score = 222 bits (565), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 152/604 (25%), Positives = 282/604 (46%), Gaps = 22/604 (3%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
+ +A+ +++ +A + +++ + N + L + V+ E L+ +R G
Sbjct: 202 VDMYAKCDRISDARRVFEWI----VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNY 198
+ ++ Y G +DA +F E SS V WN ++ G GK+ V Y
Sbjct: 258 RPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGH---GKRGCETVAIEY 314
Query: 199 M-KMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFK 257
MR+ V+ T V+ + + L GL HA IK G + + +SL+ MY K
Sbjct: 315 FFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK 374
Query: 258 CGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTIL 317
C K++ A +VF+ +++ V W +MI G+AHN + ++ M G + T L
Sbjct: 375 CEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSL 434
Query: 318 LPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERN 377
L + ++G + H+ ++K ++ ++ LFV ++LVDMY KC + A ++F +R+
Sbjct: 435 LSTCAASHDLEMGSQFHSIIIK-KKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRD 493
Query: 378 EILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHA 437
+ W ++ YV + +A M G D +A+ + C+ + L GK++H
Sbjct: 494 NVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHC 553
Query: 438 YAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDD 497
+VK ++ +SL+ MYSKCG++ + K+F + +V+S A+I +N L++
Sbjct: 554 LSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEE 612
Query: 498 ALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASV-PFVAAENI 556
A+ +F+ M P + A ++ + ++L LG + HGQ+ K+ F+S ++ +
Sbjct: 613 AVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLL 672
Query: 557 KMY-GMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNH 615
MY G E L + K + WT ++ + N +EAL + +MR+ G P+
Sbjct: 673 GMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQ 732
Query: 616 FTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRFRE 675
TF +L +C+ + + + G I +L H +D LT I+ + +
Sbjct: 733 ATFVTVLRVCS----------VLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGD 782
Query: 676 MSSS 679
M S
Sbjct: 783 MKGS 786
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 141/522 (27%), Positives = 237/522 (45%), Gaps = 39/522 (7%)
Query: 106 NVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVF 165
N TF+ +++ C R ++ GR IH + GLE N + LV MY C DA +VF
Sbjct: 159 NKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVF 218
Query: 166 DESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASA 225
+ + W L G V AG ++F +MR+ G + + F
Sbjct: 219 EWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFE--RMRDEGHRPDHLAF------------ 264
Query: 226 LMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAG 285
++I+ Y + GK+K AR +F E D+V W MI+G
Sbjct: 265 -----------------------VTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISG 301
Query: 286 FAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSE 345
A++ M + + L +L IG LG VHA +K +
Sbjct: 302 HGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIK-LGLAS 360
Query: 346 ELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQ 405
++V SSLV MY KC M +A +VF EE+N++ W A++ GY NG + + M+
Sbjct: 361 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 420
Query: 406 QEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLD 465
G+ D T +++ C+ L G + H+ +K + N+ + +L+ MY+KCG L+
Sbjct: 421 SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE 480
Query: 466 YSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSG 525
+ ++F+ M R+ ++W +I S +++ +A +F+ M L D +A L
Sbjct: 481 DARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACT 540
Query: 526 QLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTA 585
+ L GK++H +K + I MY CG ++ A+ VF ++P ++ A
Sbjct: 541 HVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNA 600
Query: 586 IIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQ 627
+I Y N+L +EA+ LF +M G P+ TF ++ C++
Sbjct: 601 LIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHK 641
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/502 (25%), Positives = 223/502 (44%), Gaps = 39/502 (7%)
Query: 126 GRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVI 185
G+ +H+ I G+++ G L +V +Y C AEK FD + V WN++L
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKD-VTAWNSMLSMYSS 137
Query: 186 AGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYL 245
GK VL +++ + E + N +TFS V+ + A + + G + H +IK G
Sbjct: 138 IGKPGK--VLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNS 195
Query: 246 ILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIRE 305
+L+DMY KC +I ARRVF+ D + V W + +G+ L EA+ M E
Sbjct: 196 YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE 255
Query: 306 GIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNS 365
G P+ + A+V ++++ Y + +
Sbjct: 256 GHRPDHL----------------------AFV--------------TVINTYIRLGKLKD 279
Query: 366 AWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQ 425
A +F E + + W ++SG+ G A+ M++ + T+ +V+
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 426 LKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAM 485
+ L+ G +HA A+K N+ + +SL+ MYSKC ++ + K+F+ +E +N + W AM
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAM 399
Query: 486 IDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDF 545
I NG + +F M+ S + D +LS L++G + H ++KK
Sbjct: 400 IRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL 459
Query: 546 ASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDK 605
A FV + MY CG LE A+ +F+ + + ++TW II +Y ++ EA LF +
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKR 519
Query: 606 MRNGGFTPNHFTFKVLLSICNQ 627
M G + L C
Sbjct: 520 MNLCGIVSDGACLASTLKACTH 541
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 205/458 (44%), Gaps = 48/458 (10%)
Query: 223 ASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSM 282
A AL G H+ + G L +++D+Y KC ++ A + FD ++D+ W SM
Sbjct: 73 ALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSM 131
Query: 283 IAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKN-- 340
++ ++ + L + I+PN +I+L + G+++H ++K
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 341 ERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRS 400
ER S + +LVDMY KC ++ A RVF + N + WT L SGYV G E+A+
Sbjct: 192 ERNS---YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLV 248
Query: 401 IAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSK 460
M+ EG RPD + TVI Y +
Sbjct: 249 FERMRDEGHRPDHLAFVTVINT-----------------------------------YIR 273
Query: 461 CGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARM 520
G L + LF EM +V++W MI + G A+ F +M+ S + + +
Sbjct: 274 LGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSV 333
Query: 521 LSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGS 580
LS G + L LG +H + +K AS +V + + MY C +E A VF+A+ K
Sbjct: 334 LSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND 393
Query: 581 ITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNV 640
+ W A+I Y +N + + LF M++ G+ + FTF LLS C + + + ++
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSI 453
Query: 641 MSRGYKIEALEEHYLI---MIDILTRFGRIEEAHRFRE 675
+ + + L ++ + ++D+ + G +E+A + E
Sbjct: 454 IIK----KKLAKNLFVGNALVDMYAKCGALEDARQIFE 487
>sp|Q9SII7|PP159_ARATH Pentatricopeptide repeat-containing protein At2g17210
OS=Arabidopsis thaliana GN=PCMP-E77 PE=2 SV=2
Length = 736
Score = 261 bits (668), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 171/601 (28%), Positives = 292/601 (48%), Gaps = 12/601 (1%)
Query: 73 RAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVT-TFNALITACVRTRSLVEGRLIHT 131
+A+ I++ + K +E + + + G+ N F + AC + L +GR I
Sbjct: 12 QALSSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGRCIQA 71
Query: 132 HIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRY 191
+ G E+ + + Y CG + FD +S WN ++ G + G +
Sbjct: 72 SLLKRGFESFVSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEE 131
Query: 192 RGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSL 251
L+ + K+R G + N T VI A S G K H +I++GF ++ S+
Sbjct: 132 G--LWWFSKLRVWGFEPNTSTLVLVIH--ACRSLWFDGEKIHGYVIRSGFCGISSVQNSI 187
Query: 252 IDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREG-IYPN 310
+ MY + AR++FDE +RD++ W +I + ++ L + M+ E P+
Sbjct: 188 LCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPD 246
Query: 311 SVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVF 370
V +T +L +G+ VH + ++ ++FV +SL+DMY K D++SA+RVF
Sbjct: 247 CVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVF 306
Query: 371 YETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALN 430
ET RN + W ++++G+V N R ++AL M QE D VTV +++ VC +
Sbjct: 307 DETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPL 366
Query: 431 HGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCI 490
K IH ++ + N ++SL+ Y+ C ++D + + D M ++V+S + MI
Sbjct: 367 PCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLA 426
Query: 491 ENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPF 550
GR D+A+ +F M + P+++ + +L+ L+ K HG +++ A
Sbjct: 427 HAGRSDEAISIFCHM---RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDI 483
Query: 551 -VAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNG 609
V + Y CG +E A+ FD + K I+WT II AY N L +AL+LFD+M+
Sbjct: 484 SVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQK 543
Query: 610 GFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEE 669
G+TPN T+ LS CN G + IF M +L +HY ++D+L+R G I+
Sbjct: 544 GYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSL-QHYSCIVDMLSRAGEIDT 602
Query: 670 A 670
A
Sbjct: 603 A 603
Score = 132 bits (333), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 181/388 (46%), Gaps = 9/388 (2%)
Query: 106 NVTTFNALITACVRTRSLVEGRLIHTHIRINGLE-NNGFLRTKLVKMYTSCGSFEDAEKV 164
+ T +++ AC + GR +H G + + F+ L+ MY+ + A +V
Sbjct: 246 DCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRV 305
Query: 165 FDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGAS 224
FDE++ ++ WN++L G V +RY L + M + V+++ T +++
Sbjct: 306 FDETTCRNIVSWNSILAGFV--HNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFE 363
Query: 225 ALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIA 284
+ H ++I+ G+ + +SLID Y C + A V D +D+V +MI+
Sbjct: 364 QPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMIS 423
Query: 285 GFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYS 344
G AH EA+ M R+ PN++ + LL + + + H ++
Sbjct: 424 GLAHAGRSDEAISIFCHM-RD--TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAI 480
Query: 345 EELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWM 404
++ V +S+VD Y KC + A R F + E+N I WT ++S Y NG ++AL M
Sbjct: 481 NDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEM 540
Query: 405 QQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVL 464
+Q+G+ P+ VT + C+ + G I V+ P++ + ++ M S+ G +
Sbjct: 541 KQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEI 600
Query: 465 DYSLKLFDEM--EVR-NVISWTAMIDSC 489
D +++L + +V+ +W A++ C
Sbjct: 601 DTAVELIKNLPEDVKAGASAWGAILSGC 628
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 261 bits (667), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 191/735 (25%), Positives = 330/735 (44%), Gaps = 105/735 (14%)
Query: 17 SFPPNPISNNHQFFKLKASATKPESTYFQKRKKYHTKKSAEKDAFPSSLPLHEKNPRAIY 76
S P N I N F + ++KP S K+H +++ H + + +
Sbjct: 3 SLPFNTIPNKVPF----SVSSKPSS-------KHHDEQA------------HSPSSTSYF 39
Query: 77 KDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRIN 136
+ + ++KEAL ++ MD + + + + ++ CV R L G+ IH I N
Sbjct: 40 HRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKN 99
Query: 137 G--LENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRY--- 191
G N ++ TKLV Y C + E AE +F + +V+ W A+I K R
Sbjct: 100 GDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSW-----AAIIGVKCRIGLC 154
Query: 192 RGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSL 251
G L +++M E + + + V K+ G H ++K+G D + + +SL
Sbjct: 155 EGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSL 214
Query: 252 IDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNS 311
DMY KCG + A +VFDE DR+ V W +++ G+ N EA+ M ++G+ P
Sbjct: 215 ADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTR 274
Query: 312 VVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFY 371
V ++ L + G++ HA + N + + +SL++ YCK + A VF
Sbjct: 275 VTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNIL-GTSLLNFYCKVGLIEYAEMVFD 333
Query: 372 ETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNH 431
E++ + W ++SGYV G +E A+ M+ E + D VT+AT++ ++ + L
Sbjct: 334 RMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKL 393
Query: 432 GKEIHAYAVKNQFLPNVSIITSLMIMYSKCG-------VLDYS----------------- 467
GKE+ Y +++ F ++ + +++M MY+KCG V D +
Sbjct: 394 GKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAE 453
Query: 468 -------LKLFDEMEVR----NVISWTAMIDSCIENGRLDDALGVF-------------- 502
L+LF M++ NVI+W +I S + NG++D+A +F
Sbjct: 454 SGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLIS 513
Query: 503 ---------------------RSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVL 541
R MQ S RP++ ++ LS L +L +G+ IHG ++
Sbjct: 514 WTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYII 573
Query: 542 KK-DFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEAL 600
+ +S+ + + MY CG + A+ VF + A+I AY +EA+
Sbjct: 574 RNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAI 633
Query: 601 SLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDI 660
+L+ + G P++ T +LS CN AG ++A IF + ++ EHY +M+D+
Sbjct: 634 ALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDL 693
Query: 661 LTRFGRIEEAHRFRE 675
L G E+A R E
Sbjct: 694 LASAGETEKALRLIE 708
Score = 225 bits (574), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 146/457 (31%), Positives = 244/457 (53%), Gaps = 5/457 (1%)
Query: 226 LMQGLKTHALLIKNG--FVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMI 283
L G + HA ++KNG + + T L+ Y KC +++A +F + R++ W ++I
Sbjct: 86 LSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAII 145
Query: 284 AGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERY 343
L AL M+ I+P++ V+ + G + G+ VH YV+K+
Sbjct: 146 GVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKS-GL 204
Query: 344 SEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAW 403
+ +FV SSL DMY KC ++ A +VF E +RN + W ALM GYV NG+ E+A+R +
Sbjct: 205 EDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSD 264
Query: 404 MQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGV 463
M+++G P VTV+T + + + + GK+ HA A+ N + + TSL+ Y K G+
Sbjct: 265 MRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGL 324
Query: 464 LDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSV 523
++Y+ +FD M ++V++W +I ++ G ++DA+ + + M+L K + D V +A ++S
Sbjct: 325 IEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSA 384
Query: 524 SGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITW 583
+ + + LKLGKE+ ++ F S +A+ + MY CG + AK VFD+ K I W
Sbjct: 385 AARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILW 444
Query: 584 TAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSR 643
++ AY + L EAL LF M+ G PN T+ +++ + G DEA +F M
Sbjct: 445 NTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS 504
Query: 644 GYKIEALEEHYLIMIDILTRFGRIEEAHRF-REMSSS 679
I L + M++ + + G EEA F R+M S
Sbjct: 505 SGIIPNLIS-WTTMMNGMVQNGCSEEAILFLRKMQES 540
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 185/400 (46%), Gaps = 34/400 (8%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
I + +Q +++A+ + M + + + T L++A RT +L G+ + + +
Sbjct: 347 ISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSF 406
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNY 198
E++ L + ++ MY CGS DA+KVFD + + + WN LL +G LF
Sbjct: 407 ESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYG 466
Query: 199 MKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKC 258
M++ GV NV T++ +I S L++NG VD DM+ +
Sbjct: 467 MQLE--GVPPNVITWNLIILS----------------LLRNGQVD------EAKDMFLQM 502
Query: 259 GKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILL 318
+ +++ W +M+ G N EA+ R M G+ PN+ +T+ L
Sbjct: 503 QSSGII---------PNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVAL 553
Query: 319 PVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNE 378
+ +G+ +H Y+++N ++S + + +SLVDMY KC D+N A +VF
Sbjct: 554 SACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSEL 613
Query: 379 ILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAY 438
L A++S Y G L++A+ ++ G +PD +T+ V+ C+ +N EI
Sbjct: 614 PLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTD 673
Query: 439 AV-KNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVR 477
V K P + ++ + + G + +L+L +EM +
Sbjct: 674 IVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFK 713
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 261 bits (666), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/555 (27%), Positives = 275/555 (49%), Gaps = 71/555 (12%)
Query: 105 VNVTTFNALITACVRTR-SLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEK 163
+ + F L+ +C++++ S + R +H + +G N F++ +L+ Y+ CGS ED +
Sbjct: 17 TDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 164 VFDESSSESVYPWNALLRG--------------------------AVIAG---KKRYRGV 194
VFD+ ++Y WN+++ G ++++G R
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 195 LFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDM 254
L + M + G LN Y+F+ V+ + +G + + +G++ H+L+ K+ F+ + + ++L+DM
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 255 YFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVL 314
Y KCG + A+RVFDE GDR++V W S+I F N EALD + M+ + P+ V L
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 315 TILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRV----- 369
++ A K+GQEVH V+KN++ ++ + ++ VDMY KC + A +
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 370 --------------------------FYETEERNEILWTALMSGYVSNGRLEQALRSIAW 403
F + ERN + W AL++GY NG E+AL
Sbjct: 317 IRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 404 MQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFL------PNVSIITSLMIM 457
+++E P + A ++ C+ L L+ G + H + +K+ F ++ + SL+ M
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 458 YSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAM 517
Y KCG ++ +F +M R+ +SW AMI +NG ++AL +FR M S +PD + M
Sbjct: 437 YVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITM 496
Query: 518 ARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAEN--IKMYGMCGFLECAKLVFDAV 575
+LS G ++ G+ + +DF P + + G GFLE AK + + +
Sbjct: 497 IGVLSACGHAGFVEEGRHYFSS-MTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Query: 576 PVK-GSITWTAIIEA 589
P++ S+ W +++ A
Sbjct: 556 PMQPDSVIWGSLLAA 570
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 161/513 (31%), Positives = 240/513 (46%), Gaps = 70/513 (13%)
Query: 232 THALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDE-------------TG------ 272
HA +IK+GF + + ++ LID Y KCG ++ R+VFD+ TG
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 273 ------------DRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPV 320
+RD W SM++GFA + EAL M +EG N +L
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 321 IGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEIL 380
G +VH+ + K+ S+ +++ S+LVDMY KC ++N A RVF E +RN +
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSD-VYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 381 WTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAV 440
W +L++ + NG +AL M + PD VT+A+VI C+ L A+ G+E+H V
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 441 KNQFLPNVSIITSLMI-MYSKCGVLDYSLKLFDEMEVRNVI------------------- 480
KN L N I+++ + MY+KC + + +FD M +RNVI
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 481 ------------SWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLK 528
SW A+I +NG ++AL +F ++ P + A +L L
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 400
Query: 529 ALKLGKEIHGQVLKKDF------ASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSIT 582
L LG + H VLK F FV I MY CG +E LVF + + ++
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 460
Query: 583 WTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMS 642
W A+I + N EAL LF +M G P+H T +LS C AGF +E F+ M+
Sbjct: 461 WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMT 520
Query: 643 RGYKIEALEEHYLIMIDILTRFGRIEEAHRFRE 675
R + + L +HY M+D+L R G +EEA E
Sbjct: 521 RDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIE 553
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 222/472 (47%), Gaps = 43/472 (9%)
Query: 57 EKDAFPSSLPLHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITA 116
E D+ S+P E++ + FA+ ++ +EAL M ++G +N +F ++++A
Sbjct: 104 EADSLFRSMP--ERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 117 CVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPW 176
C + +G +H+ I + ++ ++ + LV MY+ CG+ DA++VFDE +V W
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 177 NALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALL 236
N+L+ G L + M E V+ + T + VI + A SA+ G + H +
Sbjct: 222 NSLITCFEQNGPAVE--ALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 237 IKNG-FVDYLILRTSLIDMYFKCGKIKLARRVFD-------------------------- 269
+KN + +IL + +DMY KC +IK AR +FD
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 270 -----ETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEA 324
+ +R++V W ++IAG+ N EAL + RE + P +L +
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADL 399
Query: 325 WARKLGQEVHAYVLKN-----ERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEI 379
LG + H +VLK+ +++FV +SL+DMY KC + + VF + ER+ +
Sbjct: 400 AELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV 459
Query: 380 LWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYA 439
W A++ G+ NG +AL M + G +PD +T+ V+ C + G+ +
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519
Query: 440 VKN-QFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVR-NVISWTAMIDSC 489
++ P T ++ + + G L+ + + +EM ++ + + W +++ +C
Sbjct: 520 TRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAAC 571
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 185/442 (41%), Gaps = 70/442 (15%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRING- 137
I F + EAL + M + + + T ++I+AC ++ G+ +H + N
Sbjct: 225 ITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDK 284
Query: 138 LENNGFLRTKLVKMYTSCGSFEDAEKVFD------------------------------- 166
L N+ L V MY C ++A +FD
Sbjct: 285 LRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFT 344
Query: 167 ESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASAL 226
+ + +V WNAL+ G G+ LF +K RE V Y+F+ ++K+ A + L
Sbjct: 345 KMAERNVVSWNALIAGYTQNGENEEALSLFCLLK-RE-SVCPTHYSFANILKACADLAEL 402
Query: 227 MQGLKTHALLIKNGFV------DYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWG 280
G++ H ++K+GF D + + SLIDMY KCG ++ VF + +RD V W
Sbjct: 403 HLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWN 462
Query: 281 SMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKN 340
+MI GFA N EAL+ R M+ G P+ + + +L G A + G+ + + ++
Sbjct: 463 AMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRD 522
Query: 341 ERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETE-ERNEILWTALMSG-----------Y 388
+ + +VD+ + + A + E + + ++W +L++ Y
Sbjct: 523 FGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKY 582
Query: 389 VSNGRLEQALRS------IAWMQQE-GFRPDVVTV--------ATVIPVCSQLKALNHGK 433
V+ LE + ++ M E G DV+ V T P CS +K H
Sbjct: 583 VAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHD- 641
Query: 434 EIHAYAVKNQFLPNVSIITSLM 455
H + VK++ P I SL+
Sbjct: 642 --HVFMVKDKSHPRKKQIHSLL 661
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 54/207 (26%)
Query: 513 DSVAMARMLS--VSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKL 570
DS A++L + +L A+ + + +H V+K F++ F+ I Y CG LE +
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 571 VFD-------------------------------AVPVKGSITWTAIIEAYGYNDLCQEA 599
VFD ++P + TW +++ + +D C+EA
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 600 LSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEA-------LEE 652
L F M GF N ++F +LS AC N M++G ++ + L +
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLS----------ACSGLNDMNKGVQVHSLIAKSPFLSD 186
Query: 653 HYL--IMIDILTRFGRIEEAHR-FREM 676
Y+ ++D+ ++ G + +A R F EM
Sbjct: 187 VYIGSALVDMYSKCGNVNDAQRVFDEM 213
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 259 bits (662), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 176/592 (29%), Positives = 290/592 (48%), Gaps = 40/592 (6%)
Query: 121 RSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFED---AEKVFDESSS-ESVYPW 176
+++ E ++ H + GL+N+ TKLV G+ E A++VF+ S S + + +
Sbjct: 43 KTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMY 102
Query: 177 NALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALL 236
N+L+RG +G +LF ++M G+ + YTF + + A + A G++ H L+
Sbjct: 103 NSLIRGYASSGLCNEAILLF--LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 237 IKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEAL 296
+K G+ L ++ SL+ Y +CG++ AR+VFDE +R++V W SMI G+A +A+
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 297 DCARWMIR-EGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVD 355
D M+R E + PNSV + ++ + + G++V+A++ + +L V S+LVD
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVD 279
Query: 356 MYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVT 415
MY KC ++ A R+F E N L A+ S YV G +AL M G RPD ++
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 416 VATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEME 475
+ + I CSQL+ + GK H Y ++N F +I +L+ MY KC D + ++FD M
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 476 VRNVISWTAMIDSCIENGRLD-------------------------------DALGVFRS 504
+ V++W +++ +ENG +D +A+ VF S
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 505 MQLSKH-RPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCG 563
MQ + D V M + S G L AL L K I+ + K + + M+ CG
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 564 FLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLS 623
E A +F+++ + WTA I A + A+ LFD M G P+ F L+
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 624 ICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRFRE 675
C+ G + IF M + + + + HY M+D+L R G +EEA + E
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 631
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/545 (27%), Positives = 258/545 (47%), Gaps = 36/545 (6%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
I+ +A EA+++ M GI + TF ++AC ++R+ G IH I G
Sbjct: 106 IRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGY 165
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNY 198
+ F++ LV Y CG + A KVFDE S +V W +++ G + LF
Sbjct: 166 AKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFR 225
Query: 199 MKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKC 258
M +R+ V N T CVI + A L G K +A + +G ++ ++L+DMY KC
Sbjct: 226 M-VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC 284
Query: 259 GKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILL 318
I +A+R+FDE G ++ + +M + + L EAL M+ G+ P+ + + +
Sbjct: 285 NAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAI 344
Query: 319 PVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNE 378
+ G+ H YVL+N S + + ++L+DMY KC ++A+R+F +
Sbjct: 345 SSCSQLRNILWGKSCHGYVLRNGFESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTV 403
Query: 379 ILWTALMSGYVSNGRLEQALRS---------IAW----------------------MQ-Q 406
+ W ++++GYV NG ++ A + ++W MQ Q
Sbjct: 404 VTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQ 463
Query: 407 EGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDY 466
EG D VT+ ++ C L AL+ K I+ Y KN +V + T+L+ M+S+CG +
Sbjct: 464 EGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPES 523
Query: 467 SLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQ 526
++ +F+ + R+V +WTA I + G + A+ +F M +PD VA L+
Sbjct: 524 AMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSH 583
Query: 527 LKALKLGKEIHGQVLKKDFASVPFVA-AENIKMYGMCGFLECAKLVFDAVPVK-GSITWT 584
++ GKEI +LK S V + + G G LE A + + +P++ + W
Sbjct: 584 GGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWN 643
Query: 585 AIIEA 589
+++ A
Sbjct: 644 SLLAA 648
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 147/347 (42%), Gaps = 31/347 (8%)
Query: 82 FARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENN 141
+ RQ +EAL + + M G+ + + + I++C + R+++ G+ H ++ NG E+
Sbjct: 312 YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 142 GFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKM 201
+ L+ MY C + A ++FD S+++V WN+++ G V G+ F M
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 202 REL------------------------------GVQLNVYTFSCVIKSFAGASALMQGLK 231
+ + GV + T + + AL
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 232 THALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRL 291
+ + KNG + L T+L+DM+ +CG + A +F+ +RD+ W + I A
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551
Query: 292 RWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRS 351
A++ MI +G+ P+ V L + G+E+ +LK S E
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG 611
Query: 352 SLVDMYCKCRDMNSAWRVFYETE-ERNEILWTALMSGYVSNGRLEQA 397
+VD+ + + A ++ + E N+++W +L++ G +E A
Sbjct: 612 CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
>sp|O80647|PP195_ARATH Pentatricopeptide repeat-containing protein At2g39620
OS=Arabidopsis thaliana GN=PCMP-E33 PE=3 SV=1
Length = 836
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/526 (28%), Positives = 267/526 (50%), Gaps = 4/526 (0%)
Query: 146 TKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELG 205
+ L+ MY +C AE VF+E + W ++ A A + VL + MR
Sbjct: 238 SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMM--AAYAHNGFFEEVLELFDLMRNYD 295
Query: 206 VQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLAR 265
V++N + +++ A L++G+ H ++ G + + + TSL+ MY KCG++++A
Sbjct: 296 VRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAE 355
Query: 266 RVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAW 325
++F DRD+V W +MIA + EA+ R M+R I PN+V LT +L
Sbjct: 356 QLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVA 415
Query: 326 ARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALM 385
A +LG+ +H Y +K + SE L ++++ MY KC + A + F ++ + + AL
Sbjct: 416 ASRLGKSIHCYAIKADIESE-LETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALA 474
Query: 386 SGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFL 445
GY G +A M+ G PD T+ ++ C+ G ++ +K+ F
Sbjct: 475 QGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFD 534
Query: 446 PNVSIITSLMIMYSKCGVLDYSLKLFDEMEV-RNVISWTAMIDSCIENGRLDDALGVFRS 504
+ +L+ M++KC L ++ LFD+ ++ +SW M++ + +G+ ++A+ FR
Sbjct: 535 SECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQ 594
Query: 505 MQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGF 564
M++ K +P++V ++ + +L AL++G +H +++ F S V + MY CG
Sbjct: 595 MKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGM 654
Query: 565 LECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSI 624
+E ++ F + K ++W ++ AY + L A+SLF M+ P+ +F +LS
Sbjct: 655 IESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSA 714
Query: 625 CNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEA 670
C AG +E RIF M +KIEA EHY M+D+L + G EA
Sbjct: 715 CRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEA 760
Score = 248 bits (634), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 164/556 (29%), Positives = 277/556 (49%), Gaps = 14/556 (2%)
Query: 103 IPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAE 162
+P+N T ++ C R L++ +H + ++GL+ + +L+ Y+ + +
Sbjct: 1 MPINYTNLLLMLRECKNFRCLLQ---VHGSLIVSGLKPH----NQLINAYSLFQRQDLSR 53
Query: 163 KVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAG 222
+FD V WN+++RG AG R F YM E G+ + Y+F+ +K+ AG
Sbjct: 54 VIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMS-EEKGIDPDKYSFTFALKACAG 112
Query: 223 ASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSM 282
+ +GL+ H L+ + G + + T+L++MY K + AR+VFD+ +D+V W +M
Sbjct: 113 SMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTM 172
Query: 283 IAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNER 342
++G A N AL M + + V L L+P + + + + +H V+K
Sbjct: 173 VSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF 232
Query: 343 YSEELFVRSS-LVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSI 401
+F SS L+DMYC C D+ +A VF E ++E W +M+ Y NG E+ L
Sbjct: 233 ----IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELF 288
Query: 402 AWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKC 461
M+ R + V A+ + + + L G IH YAV+ + +VS+ TSLM MYSKC
Sbjct: 289 DLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKC 348
Query: 462 GVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARML 521
G L+ + +LF +E R+V+SW+AMI S + G+ D+A+ +FR M +P++V + +L
Sbjct: 349 GELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVL 408
Query: 522 SVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSI 581
+ A +LGK IH +K D S A I MY CG A F+ +P+K ++
Sbjct: 409 QGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAV 468
Query: 582 TWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICN-QAGFADEACRIFNV 640
+ A+ + Y +A ++ M+ G P+ T +L C + +A +C +
Sbjct: 469 AFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQI 528
Query: 641 MSRGYKIEALEEHYLI 656
+ G+ E H LI
Sbjct: 529 IKHGFDSECHVAHALI 544
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 150/542 (27%), Positives = 260/542 (47%), Gaps = 7/542 (1%)
Query: 79 IQRFARQNKLKEALVILDYM-DQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRING 137
I+ + R +EAL YM +++GI + +F + AC + +G IH I G
Sbjct: 71 IRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMG 130
Query: 138 LENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFN 197
LE++ ++ T LV+MY A +VFD+ + V WN ++ G G +LF+
Sbjct: 131 LESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFH 190
Query: 198 YMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFK 257
MR V ++ + +I + + H L+IK GF+ + LIDMY
Sbjct: 191 --DMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI--FAFSSGLIDMYCN 246
Query: 258 CGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTIL 317
C + A VF+E +D WG+M+A +AHN E L+ M + N V
Sbjct: 247 CADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASA 306
Query: 318 LPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERN 377
L G +H Y ++ + + V +SL+ MY KC ++ A ++F E+R+
Sbjct: 307 LQAAAYVGDLVKGIAIHDYAVQQGLIGD-VSVATSLMSMYSKCGELEIAEQLFINIEDRD 365
Query: 378 EILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHA 437
+ W+A+++ Y G+ ++A+ M + +P+ VT+ +V+ C+ + A GK IH
Sbjct: 366 VVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHC 425
Query: 438 YAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDD 497
YA+K + T+++ MY+KCG +LK F+ + +++ +++ A+ + G +
Sbjct: 426 YAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANK 485
Query: 498 ALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIK 557
A V+++M+L PDS M ML G ++GQ++K F S VA I
Sbjct: 486 AFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALIN 545
Query: 558 MYGMCGFLECAKLVFDAVPV-KGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHF 616
M+ C L A ++FD K +++W ++ Y + +EA++ F +M+ F PN
Sbjct: 546 MFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAV 605
Query: 617 TF 618
TF
Sbjct: 606 TF 607
Score = 169 bits (429), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 210/450 (46%), Gaps = 39/450 (8%)
Query: 88 LKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTK 147
L + + I DY QQG+ +V+ + T
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVS-----------------------------------VATS 340
Query: 148 LVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQ 207
L+ MY+ CG E AE++F V W+A++ AG+ LF M + ++
Sbjct: 341 LMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFR--DMMRIHIK 398
Query: 208 LNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRV 267
N T + V++ AG +A G H IK L T++I MY KCG+ A +
Sbjct: 399 PNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKA 458
Query: 268 FDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWAR 327
F+ +D V + ++ G+ +A D + M G+ P+S + +L
Sbjct: 459 FERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDY 518
Query: 328 KLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETE-ERNEILWTALMS 386
G V+ ++K+ + E V +L++M+ KC + +A +F + E++ + W +M+
Sbjct: 519 ARGSCVYGQIIKH-GFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMN 577
Query: 387 GYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLP 446
GY+ +G+ E+A+ + M+ E F+P+ VT ++ ++L AL G +H+ ++ F
Sbjct: 578 GYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCS 637
Query: 447 NVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQ 506
+ SL+ MY+KCG+++ S K F E+ + ++SW M+ + +G A+ +F SMQ
Sbjct: 638 QTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQ 697
Query: 507 LSKHRPDSVAMARMLSVSGQLKALKLGKEI 536
++ +PDSV+ +LS ++ GK I
Sbjct: 698 ENELKPDSVSFLSVLSACRHAGLVEEGKRI 727
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 50/120 (41%)
Query: 85 QNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFL 144
+ +EA+ M + N TF ++ A +L G +H+ + G + +
Sbjct: 582 HGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPV 641
Query: 145 RTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMREL 204
LV MY CG E +EK F E S++ + WN +L G LF M+ EL
Sbjct: 642 GNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENEL 701
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 256 bits (655), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 154/445 (34%), Positives = 233/445 (52%), Gaps = 3/445 (0%)
Query: 227 MQGLKT-HALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAG 285
+ G+KT A ++K+GF I + L+D KCG I AR+VFD +R IV W S+IA
Sbjct: 81 ISGIKTIQAHMLKSGFPAE-ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAY 139
Query: 286 FAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSE 345
+R EA++ R MI + P+ L+ + + K Q H +
Sbjct: 140 LIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVS 199
Query: 346 ELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQ 405
+FV S+LVDMY K A V EE++ +L TAL+ GY G +A+++ M
Sbjct: 200 NVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSML 259
Query: 406 QEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLD 465
E +P+ T A+V+ C LK + +GK IH VK+ F ++ TSL+ MY +C ++D
Sbjct: 260 VEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVD 319
Query: 466 YSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSG 525
SL++F +E N +SWT++I ++NGR + AL FR M +P+S ++ L
Sbjct: 320 DSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCS 379
Query: 526 QLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTA 585
L + G++IHG V K F + + I +YG CG + A+LVFD + I+
Sbjct: 380 NLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNT 439
Query: 586 IIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGY 645
+I +Y N +EAL LF++M N G PN T +L CN + +E C +F+ R
Sbjct: 440 MIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSF-RKD 498
Query: 646 KIEALEEHYLIMIDILTRFGRIEEA 670
KI +HY M+D+L R GR+EEA
Sbjct: 499 KIMLTNDHYACMVDLLGRAGRLEEA 523
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 232/484 (47%), Gaps = 9/484 (1%)
Query: 109 TFNALITACVRTRSLVEGRLIHTHIRINGL--ENNGFLRTKLVKMYTSCGSFEDAEKVFD 166
F+ L+ C+ RS+ + I H+ +G E +G +KLV CG + A +VFD
Sbjct: 67 NFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISG---SKLVDASLKCGDIDYARQVFD 123
Query: 167 ESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASAL 226
S + WN+L+ A + +R + + Y M V + YT S V K+F+ S
Sbjct: 124 GMSERHIVTWNSLI--AYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLE 181
Query: 227 MQGLKTHALLIKNGF-VDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAG 285
+ ++H L + G V + + ++L+DMY K GK + A+ V D ++D+V+ ++I G
Sbjct: 182 KEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVG 241
Query: 286 FAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSE 345
++ EA+ + M+ E + PN +L G G+ +H ++K+ +
Sbjct: 242 YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSG-FES 300
Query: 346 ELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQ 405
L ++SL+ MY +C ++ + RVF E N++ WT+L+SG V NGR E AL M
Sbjct: 301 ALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMM 360
Query: 406 QEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLD 465
++ +P+ T+++ + CS L G++IH K F + + L+ +Y KCG D
Sbjct: 361 RDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSD 420
Query: 466 YSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSG 525
+ +FD + +VIS MI S +NG +AL +F M +P+ V + +L
Sbjct: 421 MARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACN 480
Query: 526 QLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTA 585
+ ++ G E+ K A + + G G LE A+++ V + W
Sbjct: 481 NSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRT 540
Query: 586 IIEA 589
++ A
Sbjct: 541 LLSA 544
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 183/412 (44%), Gaps = 4/412 (0%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
I + + KEA+ + M + + T +++ A E + H I GL
Sbjct: 137 IAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGL 196
Query: 139 E-NNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFN 197
E +N F+ + LV MY G +A+ V D + V AL+ G G+ F
Sbjct: 197 EVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQ 256
Query: 198 YMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFK 257
M + + VQ N YT++ V+ S + G H L++K+GF L +TSL+ MY +
Sbjct: 257 SMLVEK--VQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLR 314
Query: 258 CGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTIL 317
C + + RVF + V W S+I+G N AL R M+R+ I PNS L+
Sbjct: 315 CSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSA 374
Query: 318 LPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERN 377
L + G+++H V K + + + S L+D+Y KC + A VF E +
Sbjct: 375 LRGCSNLAMFEEGRQIHGIVTKYG-FDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVD 433
Query: 378 EILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHA 437
I ++ Y NG +AL M G +P+ VTV +V+ C+ + + G E+
Sbjct: 434 VISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFD 493
Query: 438 YAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSC 489
K++ + ++ + + G L+ + L E+ +++ W ++ +C
Sbjct: 494 SFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSAC 545
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 157/339 (46%), Gaps = 15/339 (4%)
Query: 67 LHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEG 126
+ EK+ I I ++++ + EA+ M + + N T+ +++ +C + + G
Sbjct: 227 VEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNG 286
Query: 127 RLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIA 186
+LIH + +G E+ +T L+ MY C +D+ +VF + W +L+ G V
Sbjct: 287 KLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQN 346
Query: 187 GKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLI 246
G++ L + KM ++ N +T S ++ + + +G + H ++ K GF
Sbjct: 347 GREEM--ALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKY 404
Query: 247 LRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREG 306
+ LID+Y KCG +AR VFD + D++ +MI +A N EALD MI G
Sbjct: 405 AGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLG 464
Query: 307 IYPNSV-VLTILLPVIGEAWARKLGQEVHAY-----VLKNERYSEELFVRSSLVDMYCKC 360
+ PN V VL++LL + + ++ +L N+ Y + +VD+ +
Sbjct: 465 LQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHY-------ACMVDLLGRA 517
Query: 361 RDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALR 399
+ A + E + +LW L+S + ++E A R
Sbjct: 518 GRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAER 556
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 256 bits (654), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 159/585 (27%), Positives = 278/585 (47%), Gaps = 5/585 (0%)
Query: 90 EALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLV 149
EA+ + M GI F+++++AC + SL G +H + G ++ ++ LV
Sbjct: 271 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 330
Query: 150 KMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLN 209
+Y G+ AE +F S +N L+ G G LF M + G++ +
Sbjct: 331 SLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD--GLEPD 388
Query: 210 VYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFD 269
T + ++ + + L +G + HA K GF + +L+++Y KC I+ A F
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 270 ETGDRDIVVWGSMIAGFAH-NRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARK 328
ET ++V+W M+ + + LR + R M E I PN +L +
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLR-NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 329 LGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGY 388
LG+++H+ ++K + +V S L+DMY K +++AW + ++ + WT +++GY
Sbjct: 508 LGEQIHSQIIKT-NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Query: 389 VSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNV 448
++AL + M G R D V + + C+ L+AL G++IHA A + F ++
Sbjct: 567 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDL 626
Query: 449 SIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLS 508
+L+ +YS+CG ++ S F++ E + I+W A++ ++G ++AL VF M
Sbjct: 627 PFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNRE 686
Query: 509 KHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECA 568
++ + + + +K GK++H + K + S V I MY CG + A
Sbjct: 687 GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDA 746
Query: 569 KLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQA 628
+ F V K ++W AII AY + EAL FD+M + PNH T +LS C+
Sbjct: 747 EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 806
Query: 629 GFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRF 673
G D+ F M+ Y + EHY+ ++D+LTR G + A F
Sbjct: 807 GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 851
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 168/583 (28%), Positives = 289/583 (49%), Gaps = 14/583 (2%)
Query: 95 LDYMDQQGIPVNVTTFNALITACVRTR-SLVEGRLIHTHIRINGLENNGFLRTKLVKMYT 153
+D ++ +GI N T L+ C++T SL EGR +H+ I GL++NG L KL Y
Sbjct: 72 IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 131
Query: 154 SCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTF 213
G A KVFDE +++ WN +++ +A + V +++M V N TF
Sbjct: 132 FKGDLYGAFKVFDEMPERTIFTWNKMIKE--LASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 214 SCVIKSFAGASALMQGL-KTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETG 272
S V+++ G S + + HA ++ G D ++ LID+Y + G + LARRVFD
Sbjct: 190 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR 249
Query: 273 DRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQE 332
+D W +MI+G + N EA+ M GI P + +L + + ++G++
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 333 VHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNG 392
+H VLK +S + +V ++LV +Y ++ SA +F +R+ + + L++G G
Sbjct: 310 LHGLVLK-LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCG 368
Query: 393 RLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIIT 452
E+A+ M +G PD T+A+++ CS L G+++HAY K F N I
Sbjct: 369 YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG 428
Query: 453 SLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDD---ALGVFRSMQLSK 509
+L+ +Y+KC ++ +L F E EV NV+ W M+ + G LDD + +FR MQ+ +
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVML---VAYGLLDDLRNSFRIFRQMQIEE 485
Query: 510 HRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAK 569
P+ +L +L L+LG++IH Q++K +F +V + I MY G L+ A
Sbjct: 486 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAW 545
Query: 570 LVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAG 629
+ K ++WT +I Y + +AL+ F +M + G + +S C
Sbjct: 546 DILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQ 605
Query: 630 FADEACRIF-NVMSRGYKIEALEEHYLIMIDILTRFGRIEEAH 671
E +I G+ + ++ L+ + +R G+IEE++
Sbjct: 606 ALKEGQQIHAQACVSGFSSDLPFQNALVT--LYSRCGKIEESY 646
Score = 226 bits (577), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 163/607 (26%), Positives = 286/607 (47%), Gaps = 12/607 (1%)
Query: 77 KDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRI- 135
K I+ A +N + E + M + + N TF+ ++ AC R S+ + H RI
Sbjct: 156 KMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGGSVAFDVVEQIHARIL 214
Query: 136 -NGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGV 194
GL ++ + L+ +Y+ G + A +VFD + W A++ G ++ +
Sbjct: 215 YQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG--LSKNECEAEA 272
Query: 195 LFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDM 254
+ + M LG+ Y FS V+ + +L G + H L++K GF + +L+ +
Sbjct: 273 IRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL 332
Query: 255 YFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVL 314
YF G + A +F RD V + ++I G + +A++ + M +G+ P+S L
Sbjct: 333 YFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTL 392
Query: 315 TILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETE 374
L+ GQ++HAY K ++ + +L+++Y KC D+ +A F ETE
Sbjct: 393 ASLVVACSADGTLFRGQQLHAYTTK-LGFASNNKIEGALLNLYAKCADIETALDYFLETE 451
Query: 375 ERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKE 434
N +LW ++ Y L + R MQ E P+ T +++ C +L L G++
Sbjct: 452 VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQ 511
Query: 435 IHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGR 494
IH+ +K F N + + L+ MY+K G LD + + ++V+SWT MI +
Sbjct: 512 IHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNF 571
Query: 495 LDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFAS-VPFVAA 553
D AL FR M R D V + +S L+ALK G++IH Q F+S +PF A
Sbjct: 572 DDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNA 631
Query: 554 ENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTP 613
+ +Y CG +E + L F+ +I W A++ + + +EAL +F +M G
Sbjct: 632 L-VTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN 690
Query: 614 NHFTFKVLLSICNQAGFADEACRIFNVMSR-GYKIEALEEHYLIMIDILTRFGRIEEAHR 672
N+FTF + ++ + ++ V+++ GY E E +I + + G I +A +
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET--EVCNALISMYAKCGSISDAEK 748
Query: 673 -FREMSS 678
F E+S+
Sbjct: 749 QFLEVST 755
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 208/444 (46%), Gaps = 17/444 (3%)
Query: 86 NKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLR 145
+ L+ + I M + I N T+ +++ C+R L G IH+ I + N ++
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC 528
Query: 146 TKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYR---GVLFNYMKMR 202
+ L+ MY G + A + + + V W + IAG +Y L + +M
Sbjct: 529 SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM-----IAGYTQYNFDDKALTTFRQML 583
Query: 203 ELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIK 262
+ G++ + + + + AG AL +G + HA +GF L + +L+ +Y +CGKI+
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Query: 263 LARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIG 322
+ F++T D + W ++++GF + EAL M REGI N+ +
Sbjct: 644 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703
Query: 323 EAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWT 382
E K G++VHA + K Y E V ++L+ MY KC ++ A + F E +NE+ W
Sbjct: 704 ETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWN 762
Query: 383 ALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKN 442
A+++ Y +G +AL S M RP+ VT+ V+ CS + ++ G I + N
Sbjct: 763 AIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG--IAYFESMN 820
Query: 443 Q---FLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVR-NVISWTAMIDSCIENGRLDDA 498
P ++ M ++ G+L + + EM ++ + + W ++ +C+ + ++
Sbjct: 821 SEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNME-- 878
Query: 499 LGVFRSMQLSKHRPDSVAMARMLS 522
+G F + L + P+ A +LS
Sbjct: 879 IGEFAAHHLLELEPEDSATYVLLS 902
Score = 112 bits (281), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 2/240 (0%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
I + + N +AL M +GI + ++AC ++L EG+ IH ++G
Sbjct: 563 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 622
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNY 198
++ + LV +Y+ CG E++ F+++ + WNAL+ G +G L +
Sbjct: 623 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEE--ALRVF 680
Query: 199 MKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKC 258
++M G+ N +TF +K+ + + + QG + HA++ K G+ + +LI MY KC
Sbjct: 681 VRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKC 740
Query: 259 GKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILL 318
G I A + F E ++ V W ++I ++ + EALD MI + PN V L +L
Sbjct: 741 GSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVL 800
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 111/249 (44%), Gaps = 20/249 (8%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
+ F + +EAL + M+++GI N TF + + A T ++ +G+ +H I G
Sbjct: 664 VSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY 723
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRG--VLF 196
++ + L+ MY CGS DAEK F E S+++ WNA++ A K G L
Sbjct: 724 DSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIIN----AYSKHGFGSEALD 779
Query: 197 NYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKT-HALLIKNGFVDYLILRTSLIDMY 255
++ +M V+ N T V+ + + + +G+ ++ + G ++DM
Sbjct: 780 SFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDML 839
Query: 256 FKCGKIKLARRVFDETGDR-DIVVWGSMIAG------------FAHNRLRWEALDCARWM 302
+ G + A+ E + D +VW ++++ AH+ L E D A ++
Sbjct: 840 TRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYV 899
Query: 303 IREGIYPNS 311
+ +Y S
Sbjct: 900 LLSNLYAVS 908
>sp|Q3E9N1|PP359_ARATH Pentatricopeptide repeat-containing protein At4g39952,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2
SV=2
Length = 775
Score = 256 bits (653), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 165/566 (29%), Positives = 280/566 (49%), Gaps = 16/566 (2%)
Query: 113 LITACVRTRSLVEGRLIHTHI-RINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSE 171
+++AC G +H + + G + N + V Y+ CG +DA VFDE
Sbjct: 131 VVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDR 190
Query: 172 SVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQL---NVYTFSCVIKSFAGASALMQ 228
V W A++ G V G+ G L KM G + N T C ++ + AL +
Sbjct: 191 DVVAWTAIISGHVQNGESE--GGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKE 248
Query: 229 GLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAH 288
G H +KNG +++S+ Y K G A F E GD D+ W S+IA A
Sbjct: 249 GRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLAR 308
Query: 289 NRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELF 348
+ E+ D M +G++P+ VV++ L+ +G+ G+ H +V+++ +S +
Sbjct: 309 SGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRH-CFSLDST 367
Query: 349 VRSSLVDMYCKCRDMNSAWRVFYE-TEERNEILWTALMSGYVSNGRLEQALRSIAW---M 404
V +SL+ MYCK ++ A ++F +EE N+ W ++ GY G+++ ++ I +
Sbjct: 368 VCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY---GKMKCHVKCIELFRKI 424
Query: 405 QQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVL 464
Q G D + +VI CS + A+ GK +H Y VK +S++ SL+ +Y K G L
Sbjct: 425 QNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDL 484
Query: 465 DYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVS 524
+ ++F E + NVI+W AMI S + + + A+ +F M +P S+ + +L
Sbjct: 485 TVAWRMFCEADT-NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMAC 543
Query: 525 GQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWT 584
+L+ G+ IH + + + ++A I MY CG LE ++ +FDA K ++ W
Sbjct: 544 VNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWN 603
Query: 585 AIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRG 644
+I YG + + A++LFD+M P TF LLS C AG ++ ++F M +
Sbjct: 604 VMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ- 662
Query: 645 YKIEALEEHYLIMIDILTRFGRIEEA 670
Y ++ +HY ++D+L+R G +EEA
Sbjct: 663 YDVKPNLKHYSCLVDLLSRSGNLEEA 688
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 144/575 (25%), Positives = 259/575 (45%), Gaps = 47/575 (8%)
Query: 106 NVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVF 165
N T AC +L EGR +H NGL ++ F+++ + Y+ G+ +A F
Sbjct: 229 NPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSF 288
Query: 166 DESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASA 225
E E ++ W +++ +G +F +M+ G+ + SC+I
Sbjct: 289 RELGDEDMFSWTSIIASLARSGDMEESFDMF--WEMQNKGMHPDGVVISCLINELGKMML 346
Query: 226 LMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVF---DETGDRDIVVWGSM 282
+ QG H +I++ F + SL+ MY K + +A ++F E G+++ W +M
Sbjct: 347 VPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKE--AWNTM 404
Query: 283 IAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNER 342
+ G+ + + ++ R + GI +S T ++ A LG+ +H YV+K
Sbjct: 405 LKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTS- 463
Query: 343 YSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIA 402
+ V +SL+D+Y K D+ AWR+F E + N I W A+++ YV + E+A+
Sbjct: 464 LDLTISVVNSLIDLYGKMGDLTVAWRMFCEA-DTNVITWNAMIASYVHCEQSEKAIALFD 522
Query: 403 WMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCG 462
M E F+P +T+ T++ C +L G+ IH Y + + N+S+ +L+ MY+KCG
Sbjct: 523 RMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCG 582
Query: 463 VLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLS 522
L+ S +LFD ++ + W MI +G ++ A+ +F M+ S +P +LS
Sbjct: 583 HLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLS 642
Query: 523 VSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSIT 582
++ GK++ ++ + D N+K Y + D + G++
Sbjct: 643 ACTHAGLVEQGKKLFLKMHQYD-------VKPNLKHY---------SCLVDLLSRSGNL- 685
Query: 583 WTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMS 642
+EA S M F+P+ + LLS C G + R+
Sbjct: 686 --------------EEAESTVMSMP---FSPDGVIWGTLLSSCMTHGEFEMGIRM---AE 725
Query: 643 RGYKIEALEEHYLIMI-DILTRFGRIEEAHRFREM 676
R + + Y IM+ ++ + G+ EEA R REM
Sbjct: 726 RAVASDPQNDGYYIMLANMYSAAGKWEEAERAREM 760
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 151/575 (26%), Positives = 252/575 (43%), Gaps = 36/575 (6%)
Query: 114 ITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESV 173
+ C ++ SL R + I GL N F+ +KL+ Y S G + +VF + +
Sbjct: 31 VILCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDI 90
Query: 174 YPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTH 233
+ WN++++ G Y L + M G + +T V+ + A G H
Sbjct: 91 FLWNSIIKAHFSNGD--YARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVH 148
Query: 234 ALLIKNGFVDY-LILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLR 292
L++K+G D + S + Y KCG ++ A VFDE DRD+V W ++I+G N
Sbjct: 149 GLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGES 208
Query: 293 WEALDCARWMIREGI---YPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFV 349
L M G PN L A K G+ +H + +KN S + FV
Sbjct: 209 EGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSK-FV 267
Query: 350 RSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGF 409
+SS+ Y K + + A+ F E + + WT++++ +G +E++ MQ +G
Sbjct: 268 QSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGM 327
Query: 410 RPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLK 469
PD V ++ +I ++ + GK H + +++ F + ++ SL+ MY K +L + K
Sbjct: 328 HPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEK 387
Query: 470 LFDEM-EVRNVISWTAMIDS---------CIENGRLDDALGVFRSMQLSKHRPDSVAMAR 519
LF + E N +W M+ CIE +FR +Q DS +
Sbjct: 388 LFCRISEEGNKEAWNTMLKGYGKMKCHVKCIE---------LFRKIQNLGIEIDSASATS 438
Query: 520 MLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKG 579
++S + A+ LGK +H V+K V I +YG G L A +F
Sbjct: 439 VISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTN- 497
Query: 580 SITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFN 639
ITW A+I +Y + + ++A++LFD+M + F P+ T LL C G + I
Sbjct: 498 VITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHR 557
Query: 640 VMSRGYKIEALEEHYL----IMIDILTRFGRIEEA 670
Y E E L +ID+ + G +E++
Sbjct: 558 -----YITETEHEMNLSLSAALIDMYAKCGHLEKS 587
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/512 (22%), Positives = 238/512 (46%), Gaps = 22/512 (4%)
Query: 34 ASATKPESTYFQKRKKYHTKKSAEKDAFPSSLPLHEKNPRAIYKDIQRFARQNKLKEALV 93
AS+ +S+ F +++K +A+ S L +++ + I AR ++E+
Sbjct: 262 ASSKFVQSSMFS----FYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFD 317
Query: 94 ILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYT 153
+ M +G+ + + LI + + +G+ H + + + + L+ MY
Sbjct: 318 MFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYC 377
Query: 154 SCGSFEDAEKVFDESSSE-SVYPWNALLRGAVIAGK-KRYRGVLFNYMKMRELGVQLNVY 211
AEK+F S E + WN +L+G GK K + + + K++ LG++++
Sbjct: 378 KFELLSVAEKLFCRISEEGNKEAWNTMLKG---YGKMKCHVKCIELFRKIQNLGIEIDSA 434
Query: 212 TFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDET 271
+ + VI S + A++ G H ++K + + SLID+Y K G + +A R+F E
Sbjct: 435 SATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA 494
Query: 272 GDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQ 331
D +++ W +MIA + H +A+ M+ E P+S+ L LL + + GQ
Sbjct: 495 -DTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQ 553
Query: 332 EVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSN 391
+H Y+ + E + L + ++L+DMY KC + + +F +++ + W ++SGY +
Sbjct: 554 MIHRYITETE-HEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMH 612
Query: 392 GRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEI----HAYAVKNQFLPN 447
G +E A+ M++ +P T ++ C+ + GK++ H Y VK PN
Sbjct: 613 GDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVK----PN 668
Query: 448 VSIITSLMIMYSKCGVLDYSLKLFDEMEVR-NVISWTAMIDSCIENGRLDDALGVFRSMQ 506
+ + L+ + S+ G L+ + M + + W ++ SC+ +G + + +
Sbjct: 669 LKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAV 728
Query: 507 LSKHRPDS--VAMARMLSVSGQLKALKLGKEI 536
S + D + +A M S +G+ + + +E+
Sbjct: 729 ASDPQNDGYYIMLANMYSAAGKWEEAERAREM 760
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 252 bits (643), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 162/599 (27%), Positives = 301/599 (50%), Gaps = 15/599 (2%)
Query: 82 FARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENN 141
F+R + +EA + + + G+ ++ + F++++ + GR +H G ++
Sbjct: 68 FSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDD 127
Query: 142 GFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKM 201
+ T LV Y +F+D KVFDE +V W L+ G A VL +M+M
Sbjct: 128 VSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISG--YARNSMNDEVLTLFMRM 185
Query: 202 RELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKI 261
+ G Q N +TF+ + A +GL+ H +++KNG + + SLI++Y KCG +
Sbjct: 186 QNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNV 245
Query: 262 KLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVI 321
+ AR +FD+T + +V W SMI+G+A N L EAL M + + ++ +
Sbjct: 246 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLC 305
Query: 322 GEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETE-ERNEIL 380
+ +++H V+K ++ +R++L+ Y KC M A R+F E N +
Sbjct: 306 ANLKELRFTEQLHCSVVKYGFLFDQ-NIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVS 364
Query: 381 WTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVT---VATVIPVCSQLKALNHGKEIHA 437
WTA++SG++ N E+A+ + M+++G RP+ T + T +PV S E+HA
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP-------SEVHA 417
Query: 438 YAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDD 497
VK + + ++ T+L+ Y K G ++ + K+F ++ +++++W+AM+ + G +
Sbjct: 418 QVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEA 477
Query: 498 ALGVFRSMQLSKHRPDSVAMARMLSVSGQLKA-LKLGKEIHGQVLKKDFASVPFVAAENI 556
A+ +F + +P+ + +L+V A + GK+ HG +K S V++ +
Sbjct: 478 AIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALL 537
Query: 557 KMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHF 616
MY G +E A+ VF K ++W ++I Y + +AL +F +M+ +
Sbjct: 538 TMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGV 597
Query: 617 TFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRFRE 675
TF + + C AG +E + F++M R KI +EH M+D+ +R G++E+A + E
Sbjct: 598 TFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIE 656
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/467 (31%), Positives = 245/467 (52%), Gaps = 8/467 (1%)
Query: 160 DAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKS 219
+A +FD+S + +LL G G+ + LF + + LG++++ FS V+K
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLF--LNIHRLGMEMDCSIFSSVLKV 102
Query: 220 FAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVW 279
A + G + H IK GF+D + + TSL+D Y K K R+VFDE +R++V W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 280 GSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLK 339
++I+G+A N + E L M EG PNS L V+ E G +VH V+K
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 340 NERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALR 399
N + + V +SL+++Y KC ++ A +F +TE ++ + W +++SGY +NG +AL
Sbjct: 223 NG-LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 281
Query: 400 SIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYS 459
M+ R + A+VI +C+ LK L +++H VK FL + +I T+LM+ YS
Sbjct: 282 MFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYS 341
Query: 460 KCGVLDYSLKLFDEME-VRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMA 518
KC + +L+LF E+ V NV+SWTAMI ++N ++A+ +F M+ RP+ +
Sbjct: 342 KCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYS 401
Query: 519 RMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVK 578
+L+ + E+H QV+K ++ V + Y G +E A VF + K
Sbjct: 402 VILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK 457
Query: 579 GSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSIC 625
+ W+A++ Y + A+ +F ++ GG PN FTF +L++C
Sbjct: 458 DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
>sp|O65543|PP343_ARATH Pentatricopeptide repeat-containing protein At4g31070,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E7 PE=2
SV=2
Length = 624
Score = 250 bits (638), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 155/482 (32%), Positives = 244/482 (50%), Gaps = 18/482 (3%)
Query: 199 MKMRELGVQLNVYTFSCVIKSFAGASALMQ-----GLKTHALLIKNGFVDYLILRTSLID 253
+K+ LG F+ ++ S A A Q G + H L +K G ++ SLI
Sbjct: 46 LKIHSLGTN----GFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLIS 101
Query: 254 MYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVV 313
MY K + R+VFDE RD V + S+I + L +EA+ + M G P S +
Sbjct: 102 MYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSEL 161
Query: 314 LTILLPVIGE-AWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYE 372
+ LL + + K+ + HA VL +ER E + + ++LVDMY K D +A+ VF +
Sbjct: 162 VASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQ 221
Query: 373 TEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHG 432
E +NE+ WTA++SG V+N E + MQ+E RP+ VT+ +V+P C +L N+G
Sbjct: 222 MEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVEL---NYG 278
Query: 433 ----KEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDS 488
KEIH ++ ++ + + + M MY +CG + S LF+ +VR+V+ W++MI
Sbjct: 279 SSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISG 338
Query: 489 CIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASV 548
E G + + + M+ +SV + ++S L +H Q+LK F S
Sbjct: 339 YAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSH 398
Query: 549 PFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRN 608
+ I MY CG L A+ VF + K ++W+++I AYG + EAL +F M
Sbjct: 399 ILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIK 458
Query: 609 GGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIE 668
GG + F +LS CN AG +EA IF + Y + EHY I++L RFG+I+
Sbjct: 459 GGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGK-YHMPVTLEHYACYINLLGRFGKID 517
Query: 669 EA 670
+A
Sbjct: 518 DA 519
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 211/451 (46%), Gaps = 14/451 (3%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVE-GRLIHTHIRING 137
I + L EA+ ++ M G +L+ C R S + R+ H + ++
Sbjct: 131 INSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDE 190
Query: 138 -LENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGV-L 195
++ + L T LV MY A VFD+ ++ W A++ G V A + GV L
Sbjct: 191 RMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCV-ANQNYEMGVDL 249
Query: 196 FNYMK---MRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLI 252
F M+ +R V L +CV ++ S+L++ + H ++G L + +
Sbjct: 250 FRAMQRENLRPNRVTLLSVLPACVELNYG--SSLVK--EIHGFSFRHGCHADERLTAAFM 305
Query: 253 DMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSV 312
MY +CG + L+R +F+ + RD+V+W SMI+G+A E ++ M +EGI NSV
Sbjct: 306 TMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSV 365
Query: 313 VLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYE 372
L ++ + VH+ +LK + + + ++L+DMY KC +++A VFYE
Sbjct: 366 TLLAIVSACTNSTLLSFASTVHSQILKCG-FMSHILLGNALIDMYAKCGSLSAAREVFYE 424
Query: 373 TEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHG 432
E++ + W+++++ Y +G +AL M + G D + ++ C+ +
Sbjct: 425 LTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEA 484
Query: 433 KEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVR-NVISWTAMIDSCIE 491
+ I A K + + + + G +D + ++ M ++ + W++++ +C
Sbjct: 485 QTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACET 544
Query: 492 NGRLDDALGVFRSMQLSKHRPDSVAMARMLS 522
+GRLD A G + +L K PD+ A +LS
Sbjct: 545 HGRLDVA-GKIIANELMKSEPDNPANYVLLS 574
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 249 bits (637), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 159/573 (27%), Positives = 275/573 (47%), Gaps = 13/573 (2%)
Query: 110 FNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESS 169
+ L ++ S+V G+L H H+ + L +L L+ MY C A ++FD
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 170 SESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQG 229
++ +N+L+ G G Y + +++ RE ++L+ +T++ + L G
Sbjct: 110 ERNIISFNSLISGYTQMG--FYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG 167
Query: 230 LKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHN 289
H L++ NG + L LIDMY KCGK+ A +FD +RD V W S+I+G+
Sbjct: 168 ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRV 227
Query: 290 RLRWEALDCARWMIREGIYPNSVVLTILLPV----IGEAWARKLGQEVHAYVLKNERYSE 345
E L+ M R+G+ + L +L + E + K G +H Y K
Sbjct: 228 GAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK-GMAIHCYTAK-LGMEF 285
Query: 346 ELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAW-- 403
++ VR++L+DMY K + A ++F +N + + A++SG++ + S A+
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 404 ---MQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSK 460
MQ+ G P T + V+ CS K L +G++IHA KN F + I ++L+ +Y+
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYAL 405
Query: 461 CGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARM 520
G + ++ F +++ SWT+MID ++N +L+ A +FR + S RP+ ++ M
Sbjct: 406 MGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLM 465
Query: 521 LSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGS 580
+S AL G++I G +K + V +I MY G + A VF V
Sbjct: 466 MSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDV 525
Query: 581 ITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNV 640
T++A+I + + EAL++F+ M+ G PN F +L C G + + F
Sbjct: 526 ATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQC 585
Query: 641 MSRGYKIEALEEHYLIMIDILTRFGRIEEAHRF 673
M Y+I E+H+ ++D+L R GR+ +A
Sbjct: 586 MKNDYRINPNEKHFTCLVDLLGRTGRLSDAENL 618
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 222/461 (48%), Gaps = 11/461 (2%)
Query: 69 EKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRL 128
E+N + I + + ++A+ + + + ++ T+ + C L G L
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGEL 169
Query: 129 IHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGK 188
+H + +NGL FL L+ MY+ CG + A +FD WN+L+ G V G
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGA 229
Query: 189 KRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFA---GASALMQGLKTHALLIKNGFVDYL 245
L KM G+ L Y V+K+ + +G+ H K G +
Sbjct: 230 AEEPLNLL--AKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDI 287
Query: 246 ILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAH-----NRLRWEALDCAR 300
++RT+L+DMY K G +K A ++F +++V + +MI+GF + EA
Sbjct: 288 VVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFM 347
Query: 301 WMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKC 360
M R G+ P+ +++L A + G+++HA + KN S+E F+ S+L+++Y
Sbjct: 348 DMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDE-FIGSALIELYALM 406
Query: 361 RDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVI 420
+ F T +++ WT+++ +V N +LE A + RP+ TV+ ++
Sbjct: 407 GSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMM 466
Query: 421 PVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVI 480
C+ AL+ G++I YA+K+ S+ TS + MY+K G + + ++F E++ +V
Sbjct: 467 SACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVA 526
Query: 481 SWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARML 521
+++AMI S ++G ++AL +F SM+ +P+ A +L
Sbjct: 527 TYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVL 567
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 73/163 (44%), Gaps = 11/163 (6%)
Query: 513 DSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVF 572
DS + + + ++ LGK HG ++K ++ + MY C L A+ +F
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 573 DAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFAD 632
D +P + I++ ++I Y ++A+ LF + R + FT+ L GF
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGAL------GFCG 159
Query: 633 EAC--RIFNVMSRGYKIEALEEHYL---IMIDILTRFGRIEEA 670
E C + ++ + L + ++ID+ ++ G++++A
Sbjct: 160 ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQA 202
>sp|O49680|PP324_ARATH Pentatricopeptide repeat-containing protein At4g19220,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E2 PE=3
SV=2
Length = 951
Score = 248 bits (634), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 163/594 (27%), Positives = 292/594 (49%), Gaps = 15/594 (2%)
Query: 89 KEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL--ENNGFLRT 146
+++L M G + TF+ +I+AC L G +H + +G E + +
Sbjct: 271 RKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGN 330
Query: 147 KLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGV 206
++ MY+ CG E AE VF+E V NA+L G G + N M+ + +
Sbjct: 331 SIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVD-KI 389
Query: 207 QLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVD-YLILRTSLIDMYFKCGKIKLAR 265
Q ++ T + S +G H ++ L + S+IDMY KCG A
Sbjct: 390 QPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAE 449
Query: 266 RVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIRE---GIYPNSVVLTILLPVIG 322
+F T RD+V W SMI+ F+ N +A + + ++ E + S VL IL
Sbjct: 450 LLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC-D 508
Query: 323 EAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAW-RVFYETEERNEILW 381
+ + G+ VH + L+ + + + +S+++MY CRD+ SA+ R+ +E R+ W
Sbjct: 509 SSDSLIFGKSVHCW-LQKLGFGDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSW 567
Query: 382 TALMSGYVSNGRLEQALRSIAWMQQEG-FRPDVVTVATVIPVCSQLKALNHGKEIHAYAV 440
+++SG S+G ++LR+ M +EG R D++T+ I L + G+ H A+
Sbjct: 568 NSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAI 627
Query: 441 KNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALG 500
K+ + + +L+ MY +C ++ ++K+F + N+ SW +I + +N +
Sbjct: 628 KSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQ 687
Query: 501 VFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYG 560
+FR+++L P+ + +LS S QL + G + H ++++ F + PFV+A + MY
Sbjct: 688 LFRNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYS 744
Query: 561 MCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKM-RNGGFTPNHFTFK 619
CG LE VF V W ++I A+G++ + ++A+ LF ++ N PN +F
Sbjct: 745 SCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFI 804
Query: 620 VLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRF 673
LLS C+ +GF DE + M + ++ + EH + ++D+L R G++ EA+ F
Sbjct: 805 SLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEF 858
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 228/478 (47%), Gaps = 19/478 (3%)
Query: 216 VIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRD 275
V++SF + H +K G + L + L+ Y + G++ + +FDE ++D
Sbjct: 93 VLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKD 152
Query: 276 IVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHA 335
++VW SMI N A+ MI +G +S L + + + +H
Sbjct: 153 VIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHC 212
Query: 336 YVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLE 395
++ + ++L+++Y K +++SA VF E R+ + W +M+ ++NG
Sbjct: 213 LAIETGLVGDSSLC-NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPR 271
Query: 396 QALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLP--NVSIITS 453
++L+ M G D VT + VI CS ++ L G+ +H +K+ + P +VS+ S
Sbjct: 272 KSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNS 331
Query: 454 LMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQ-LSKHRP 512
++ MYSKCG + + +F+E+ R+VIS A+++ NG ++A G+ MQ + K +P
Sbjct: 332 IISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQP 391
Query: 513 DSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPF-VAAENIKMYGMCGFLECAKLV 571
D + + S+ G L + G+ +HG ++ + S V I MYG CG A+L+
Sbjct: 392 DIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELL 451
Query: 572 FDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFA 631
F + ++W ++I A+ N +A +LF ++ + ++ + F+ +L+I +
Sbjct: 452 FKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVS-EYSCSKFSLSTVLAILTSCDSS 510
Query: 632 DEACRIFN------VMSRGYKIEALEEHYLIMI-----DILTRFGRIEEAHRFREMSS 678
D IF + G+ L + +I + D+ + F R+E R+++S
Sbjct: 511 DSL--IFGKSVHCWLQKLGFGDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTS 566
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 135/553 (24%), Positives = 244/553 (44%), Gaps = 19/553 (3%)
Query: 127 RLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIA 186
R +H GL + +KL+ Y G + +FDE + V WN+++ +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMI--TALN 164
Query: 187 GKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLI 246
RY + +++M G + + T + + + H L I+ G V
Sbjct: 165 QNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSS 224
Query: 247 LRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREG 306
L +L+++Y K + A VF RDIV W +++ N ++L + M G
Sbjct: 225 LCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSG 284
Query: 307 IYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVR--SSLVDMYCKCRDMN 364
++V + ++ LG+ +H V+K+ YS E V +S++ MY KC D
Sbjct: 285 QEADTVTFSCVISACSSIEELTLGESLHGLVIKS-GYSPEAHVSVGNSIISMYSKCGDTE 343
Query: 365 SAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQ-EGFRPDVVTVATVIPVC 423
+A VF E R+ I A+++G+ +NG E+A + MQ + +PD+ TV ++ +C
Sbjct: 344 AAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSIC 403
Query: 424 SQLKALNHGKEIHAYAVKNQFLPN-VSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISW 482
L G+ +H Y V+ + + +I S++ MY KCG+ + LF R+++SW
Sbjct: 404 GDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSW 463
Query: 483 TAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSV---SGQLKALKLGKEIHGQ 539
+MI + +NG A +F+ + +S++ +++ +L++ +L GK +H
Sbjct: 464 NSMISAFSQNGFTHKAKNLFKEV-VSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCW 522
Query: 540 VLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSIT-WTAIIEAYGYNDLCQE 598
+ K F A I MY C L A L + + +T W ++I + E
Sbjct: 523 LQKLGFGDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLE 582
Query: 599 ALSLFDKM-RNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEE-HYLI 656
+L F M R G + T +S G + R F+ G I++L E +
Sbjct: 583 SLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQG-RCFH----GLAIKSLRELDTQL 637
Query: 657 MIDILTRFGRIEE 669
++T +GR ++
Sbjct: 638 QNTLITMYGRCKD 650
>sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein At1g03540
OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1
Length = 609
Score = 246 bits (629), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/453 (31%), Positives = 234/453 (51%), Gaps = 7/453 (1%)
Query: 225 ALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGK-IKLARRVFDETGDRDIVVWGSMI 283
+ + G++ HA ++K+G + SL+ +YFK G ++ RRVFD +D + W SM+
Sbjct: 76 SFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMM 135
Query: 284 AGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERY 343
+G+ + +AL+ M+ G+ N L+ + E +LG+ H V+ + +
Sbjct: 136 SGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHG-F 194
Query: 344 SEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAW 403
F+ S+L +Y R+ A RVF E E + I WTA++S + N E+AL
Sbjct: 195 EWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYA 254
Query: 404 MQQ-EGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCG 462
M + +G PD T TV+ C L+ L GKEIH + N NV + +SL+ MY KCG
Sbjct: 255 MHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCG 314
Query: 463 VLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLS 522
+ + ++F+ M +N +SW+A++ +NG + A+ +FR M+ D +L
Sbjct: 315 SVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLK 370
Query: 523 VSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSIT 582
L A++LGKEIHGQ +++ V + I +YG G ++ A V+ + ++ IT
Sbjct: 371 ACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMIT 430
Query: 583 WTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMS 642
W A++ A N +EA+S F+ M G P++ +F +L+ C G DE F +M+
Sbjct: 431 WNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMA 490
Query: 643 RGYKIEALEEHYLIMIDILTRFGRIEEAHRFRE 675
+ Y I+ EHY MID+L R G EEA E
Sbjct: 491 KSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLE 523
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 228/458 (49%), Gaps = 9/458 (1%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
I + +L EA+ IL+ IP + +L+ C + S + G H H+ +GL
Sbjct: 33 ILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGL 92
Query: 139 ENNGFLRTKLVKMYTSCG-SFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFN 197
E + + L+ +Y G + +VFD + W +++ G V K + L
Sbjct: 93 ETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTG--KEHVKALEV 150
Query: 198 YMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFK 257
+++M G+ N +T S +K+ + + G H ++I +GF + ++L +Y
Sbjct: 151 FVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGV 210
Query: 258 CGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIR-EGIYPNSVVLTI 316
+ ARRVFDE + D++ W ++++ F+ N L EAL M R +G+ P+
Sbjct: 211 NREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGT 270
Query: 317 LLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEER 376
+L G K G+E+H ++ N + V SSL+DMY KC + A +VF ++
Sbjct: 271 VLTACGNLRRLKQGKEIHGKLITNG-IGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK 329
Query: 377 NEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIH 436
N + W+AL+ GY NG E+A+ M+++ D+ TV+ C+ L A+ GKEIH
Sbjct: 330 NSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIH 385
Query: 437 AYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLD 496
V+ NV + ++L+ +Y K G +D + +++ +M +RN+I+W AM+ + +NGR +
Sbjct: 386 GQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGE 445
Query: 497 DALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGK 534
+A+ F M +PD ++ +L+ G + G+
Sbjct: 446 EAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGR 483
Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 157/326 (48%), Gaps = 8/326 (2%)
Query: 79 IQRFARQNKLKEALVILDYMDQ-QGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRING 137
+ F++ + +EAL + M + +G+ + +TF ++TAC R L +G+ IH + NG
Sbjct: 236 LSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNG 295
Query: 138 LENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFN 197
+ +N + + L+ MY CGS +A +VF+ S ++ W+ALL G G+ +F
Sbjct: 296 IGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFR 355
Query: 198 YMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFK 257
M+ ++L Y F V+K+ AG +A+ G + H ++ G +I+ ++LID+Y K
Sbjct: 356 EMEEKDL------YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGK 409
Query: 258 CGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTIL 317
G I A RV+ + R+++ W +M++ A N EA+ M+++GI P+ + +
Sbjct: 410 SGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAI 469
Query: 318 LPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERN 377
L G G+ + K+ S ++D+ + A + E RN
Sbjct: 470 LTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRN 529
Query: 378 EI-LWTALMSGYVSNGRLEQALRSIA 402
+ LW L+ +N + IA
Sbjct: 530 DASLWGVLLGPCAANADASRVAERIA 555
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 243 bits (620), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 155/562 (27%), Positives = 267/562 (47%), Gaps = 2/562 (0%)
Query: 117 CVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPW 176
C + SL++ + +RI+ F ++ + G+ A +VFD+ + W
Sbjct: 15 CTTSISLLQKPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSW 74
Query: 177 NALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALL 236
++++ V A +LF+ M++ + V + S V+K+ +S + G HA
Sbjct: 75 TSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYA 134
Query: 237 IKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEAL 296
+K + + + +SL+DMY + GKI + RVF E R+ V W ++I G H E L
Sbjct: 135 VKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGL 194
Query: 297 DCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDM 356
M R ++ I L K G+ +H +V+ + L V +SL M
Sbjct: 195 TYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIV-RGFVTTLCVANSLATM 253
Query: 357 YCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTV 416
Y +C +M +F ER+ + WT+L+ Y G+ +A+ + M+ P+ T
Sbjct: 254 YTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTF 313
Query: 417 ATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEV 476
A++ C+ L L G+++H + ++S+ S+M MYS CG L + LF M
Sbjct: 314 ASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRC 373
Query: 477 RNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEI 536
R++ISW+ +I + G ++ F M+ S +P A+A +LSVSG + ++ G+++
Sbjct: 374 RDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQV 433
Query: 537 HGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLC 596
H L V + I MY CG ++ A ++F ++ TA+I Y +
Sbjct: 434 HALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKS 493
Query: 597 QEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLI 656
+EA+ LF+K GF P+ TF +L+ C +G D FN+M Y + +EHY
Sbjct: 494 KEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGC 553
Query: 657 MIDILTRFGRIEEAHR-FREMS 677
M+D+L R GR+ +A + EMS
Sbjct: 554 MVDLLCRAGRLSDAEKMINEMS 575
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 222/457 (48%), Gaps = 5/457 (1%)
Query: 79 IQRFARQNKLKEALVILDYMD--QQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRIN 136
I+R+ N EAL++ M + + + + ++ AC ++ ++ G +H +
Sbjct: 78 IKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKT 137
Query: 137 GLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLF 196
L ++ ++ + L+ MY G + + +VF E + W A++ G V AG RY+ L
Sbjct: 138 SLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAG--RYKEGLT 195
Query: 197 NYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYF 256
+ +M + YTF+ +K+ AG + G H +I GFV L + SL MY
Sbjct: 196 YFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYT 255
Query: 257 KCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTI 316
+CG+++ +F+ +RD+V W S+I + +A++ M + PN
Sbjct: 256 ECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFAS 315
Query: 317 LLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEER 376
+ G+++H VL + ++ L V +S++ MY C ++ SA +F R
Sbjct: 316 MFSACASLSRLVWGEQLHCNVL-SLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR 374
Query: 377 NEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIH 436
+ I W+ ++ GY G E+ + +WM+Q G +P +A+++ V + + G+++H
Sbjct: 375 DIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVH 434
Query: 437 AYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLD 496
A A+ N ++ +SL+ MYSKCG + + +F E + +++S TAMI+ E+G+
Sbjct: 435 ALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSK 494
Query: 497 DALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLG 533
+A+ +F RPDSV +L+ L LG
Sbjct: 495 EAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLG 531
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 195/427 (45%), Gaps = 18/427 (4%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
I + KE L M + + TF + AC R + G+ IHTH+ + G
Sbjct: 181 ITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGF 240
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGV--LF 196
+ L MYT CG +D +F+ S V W +L ++A K+ + V +
Sbjct: 241 VTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSL----IVAYKRIGQEVKAVE 296
Query: 197 NYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYF 256
++KMR V N TF+ + + A S L+ G + H ++ G D L + S++ MY
Sbjct: 297 TFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYS 356
Query: 257 KCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTI 316
CG + A +F RDI+ W ++I G+ E WM + G P L
Sbjct: 357 TCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALAS 416
Query: 317 LLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEER 376
LL V G + G++VHA L + VRSSL++MY KC + A +F ET+
Sbjct: 417 LLSVSGNMAVIEGGRQVHALAL-CFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRD 475
Query: 377 NEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIH 436
+ + TA+++GY +G+ ++A+ + GFRPD VT +V+ C+ L+ G H
Sbjct: 476 DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLG--FH 533
Query: 437 AYAVKNQ---FLPNVSIITSLMIMYSKCGVLDYSLKLFDEME-VRNVISWTAMIDSC--- 489
+ + + P ++ + + G L + K+ +EM ++ + WT ++ +C
Sbjct: 534 YFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAK 593
Query: 490 --IENGR 494
IE GR
Sbjct: 594 GDIERGR 600
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 242 bits (617), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 169/607 (27%), Positives = 289/607 (47%), Gaps = 22/607 (3%)
Query: 74 AIYKDIQRFARQNKLKEALVILDYMDQQGI---PVNVTTFNALITACVRTRSLVEGRLIH 130
+I I R+N AL I Q G ++ T + AC L G IH
Sbjct: 42 SINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKAC--RGDLKRGCQIH 99
Query: 131 THIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKR 190
+G + + ++ MY G F++A +F+ V WN +L G
Sbjct: 100 GFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF------D 153
Query: 191 YRGVLFNYM-KMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRT 249
+ N++ +M+ GV + +T+S + G+ + GL+ + ++K G L++
Sbjct: 154 DNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGN 213
Query: 250 SLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAH-NRLRWEALDCARWMIREGIY 308
S I MY + G + ARRVFDE +D++ W S+++G + +EA+ R M+REG+
Sbjct: 214 SFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVE 273
Query: 309 PNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWR 368
+ V T ++ KL +++H +K Y L V + L+ Y KC + +
Sbjct: 274 LDHVSFTSVITTCCHETDLKLARQIHGLCIK-RGYESLLEVGNILMSRYSKCGVLEAVKS 332
Query: 369 VFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKA 428
VF++ ERN + WT ++S SN + A+ M+ +G P+ VT +I +
Sbjct: 333 VFHQMSERNVVSWTTMIS---SNK--DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQ 387
Query: 429 LNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDS 488
+ G +IH +K F+ S+ S + +Y+K L+ + K F+++ R +ISW AMI
Sbjct: 388 IKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISG 447
Query: 489 CIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLK--ALKLGKEIHGQVLKKDFA 546
+NG +AL +F S ++ P+ +L+ + ++K G+ H +LK
Sbjct: 448 FAQNGFSHEALKMFLSAA-AETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLN 506
Query: 547 SVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKM 606
S P V++ + MY G ++ ++ VF+ + K WT+II AY + + ++LF KM
Sbjct: 507 SCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKM 566
Query: 607 RNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGR 666
P+ TF +L+ CN+ G D+ IFN+M Y +E EHY M+D+L R GR
Sbjct: 567 IKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGR 626
Query: 667 IEEAHRF 673
++EA
Sbjct: 627 LKEAEEL 633
Score = 156 bits (395), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 12/388 (3%)
Query: 90 EALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLV 149
EA+VI M ++G+ ++ +F ++IT C L R IH G E+ + L+
Sbjct: 259 EAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILM 318
Query: 150 KMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLN 209
Y+ CG E + VF + S +V W ++ + K + N MR GV N
Sbjct: 319 SRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS----SNKDDAVSIFLN---MRFDGVYPN 371
Query: 210 VYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFD 269
TF +I + + +GLK H L IK GFV + S I +Y K ++ A++ F+
Sbjct: 372 EVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFE 431
Query: 270 ETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVI--GEAWAR 327
+ R+I+ W +MI+GFA N EAL E + PN +L I E +
Sbjct: 432 DITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISV 490
Query: 328 KLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSG 387
K GQ HA++LK S + V S+L+DMY K +++ + +VF E ++N+ +WT+++S
Sbjct: 491 KQGQRCHAHLLKLGLNSCPV-VSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISA 549
Query: 388 YVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFL-P 446
Y S+G E + M +E PD+VT +V+ C++ ++ G EI ++ L P
Sbjct: 550 YSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEP 609
Query: 447 NVSIITSLMIMYSKCGVLDYSLKLFDEM 474
+ + ++ M + G L + +L E+
Sbjct: 610 SHEHYSCMVDMLGRAGRLKEAEELMSEV 637
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 242 bits (617), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 165/610 (27%), Positives = 295/610 (48%), Gaps = 26/610 (4%)
Query: 88 LKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTK 147
LK V +D M ++GI + TF ++ C G IH + G + + +
Sbjct: 162 LKSIEVFVD-MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASA 220
Query: 148 LVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQ 207
L+ MY F ++ +VF ++ W+A++ G V F M+ GV
Sbjct: 221 LLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVS 280
Query: 208 LNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRV 267
++Y + V++S A S L G + HA +K+ F I+RT+ +DMY KC ++ A+ +
Sbjct: 281 QSIY--ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQIL 338
Query: 268 FDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWAR 327
FD + + + + +MI G++ ++AL ++ G+ + + L+ +
Sbjct: 339 FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGL 398
Query: 328 KLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSG 387
G +++ +K+ S ++ V ++ +DMY KC+ + A+RVF E R+ + W A+++
Sbjct: 399 SEGLQIYGLAIKSS-LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 457
Query: 388 YVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPN 447
+ NG+ + L M + PD T +++ C+ +L +G EIH+ VK+ N
Sbjct: 458 HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASN 516
Query: 448 VSIITSLMIMYSKCGVLDYSLKL-------------FDEMEVRN-------VISWTAMID 487
S+ SL+ MYSKCG+++ + K+ +E+E + +SW ++I
Sbjct: 517 SSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIIS 576
Query: 488 SCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFAS 547
+ + +DA +F M PD A +L L + LGK+IH QV+KK+ S
Sbjct: 577 GYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQS 636
Query: 548 VPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMR 607
++ + + MY CG L ++L+F+ + +TW A+I Y ++ +EA+ LF++M
Sbjct: 637 DVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 696
Query: 608 NGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRI 667
PNH TF +L C G D+ F +M R Y ++ HY M+DIL + G++
Sbjct: 697 LENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKV 756
Query: 668 EEA-HRFREM 676
+ A REM
Sbjct: 757 KRALELIREM 766
Score = 215 bits (548), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 151/582 (25%), Positives = 273/582 (46%), Gaps = 58/582 (9%)
Query: 96 DYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSC 155
D+++Q V+ T F+ + C + +L G+ H H+ I+G F+ L+++YT+
Sbjct: 38 DFLNQVN-SVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNS 96
Query: 156 GSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMREL----------- 204
F A VFD+ V WN ++ G + FN M +R++
Sbjct: 97 RDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYL 156
Query: 205 ------------------GVQLNVYTFSCVIK--SFAGASALMQGLKTHALLIKNGFVDY 244
G++ + TF+ ++K SF ++L G++ H ++++ G
Sbjct: 157 QNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSL--GMQIHGIVVRVGCDTD 214
Query: 245 LILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIR 304
++ ++L+DMY K + + RVF +++ V W ++IAG N L AL + M +
Sbjct: 215 VVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQK 274
Query: 305 EGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMN 364
+ + +L +LG ++HA+ LK++ ++ + VR++ +DMY KC +M
Sbjct: 275 VNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD-FAADGIVRTATLDMYAKCDNMQ 333
Query: 365 SAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCS 424
A +F +E N + A+++GY +AL + G D ++++ V C+
Sbjct: 334 DAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACA 393
Query: 425 QLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTA 484
+K L+ G +I+ A+K+ +V + + + MY KC L + ++FDEM R+ +SW A
Sbjct: 394 LVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNA 453
Query: 485 MIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARML-SVSGQLKALKLGKEIHGQVLKK 543
+I + +NG+ + L +F SM S+ PD +L + +G +L G EIH ++K
Sbjct: 454 IIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG--GSLGYGMEIHSSIVKS 511
Query: 544 DFASVPFVAAENIKMYGMCGFLECAKLV----FDAVPVKGS----------------ITW 583
AS V I MY CG +E A+ + F V G+ ++W
Sbjct: 512 GMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSW 571
Query: 584 TAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSIC 625
+II Y + ++A LF +M G TP+ FT+ +L C
Sbjct: 572 NSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC 613
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 139/502 (27%), Positives = 238/502 (47%), Gaps = 27/502 (5%)
Query: 69 EKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRL 128
EKN + I + N L AL M + V+ + + +++ +C L G
Sbjct: 243 EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQ 302
Query: 129 IHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGK 188
+H H + +G +RT + MY C + +DA+ +FD S + + +NA++ G + +
Sbjct: 303 LHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG--YSQE 360
Query: 189 KRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILR 248
+ L + ++ G+ + + S V ++ A L +GL+ + L IK+ + +
Sbjct: 361 EHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVA 420
Query: 249 TSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIY 308
+ IDMY KC + A RVFDE RD V W ++IA N +E L M+R I
Sbjct: 421 NAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIE 480
Query: 309 PNSVVL-TILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAW 367
P+ +IL G + G E+H+ ++K+ S V SL+DMY KC + A
Sbjct: 481 PDEFTFGSILKACTGGSLG--YGMEIHSSIVKSGMASNS-SVGCSLIDMYSKCGMIEEAE 537
Query: 368 RV---FYE------TEERNE-----------ILWTALMSGYVSNGRLEQALRSIAWMQQE 407
++ F++ T E E + W +++SGYV + E A M +
Sbjct: 538 KIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM 597
Query: 408 GFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYS 467
G PD T ATV+ C+ L + GK+IHA +K + +V I ++L+ MYSKCG L S
Sbjct: 598 GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDS 657
Query: 468 LKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQL 527
+F++ R+ ++W AMI +G+ ++A+ +F M L +P+ V +L +
Sbjct: 658 RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHM 717
Query: 528 KALKLGKEIHGQVLKKDFASVP 549
+ G E + ++K+D+ P
Sbjct: 718 GLIDKGLE-YFYMMKRDYGLDP 738
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 216/496 (43%), Gaps = 42/496 (8%)
Query: 212 TFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDET 271
FS V K A AL G + HA +I +GF + L+ +Y A VFD+
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 272 GDRDIVVWGSMIAGFAHNRLRWEA---------LDCARW--------------------- 301
RD+V W MI G++ + ++A D W
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 302 -MIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKC 360
M REGI + I+L V LG ++H V++ ++ S+L+DMY K
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR-VGCDTDVVAASALLDMYAKG 228
Query: 361 RDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVI 420
+ + RVF E+N + W+A+++G V N L AL+ MQ+ A+V+
Sbjct: 229 KRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVL 288
Query: 421 PVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVI 480
C+ L L G ++HA+A+K+ F + + T+ + MY+KC + + LFD E N
Sbjct: 289 RSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ 348
Query: 481 SWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQV 540
S+ AMI + AL +F + S D ++++ + +K L G +I+G
Sbjct: 349 SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLA 408
Query: 541 LKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEAL 600
+K + VA I MYG C L A VFD + + +++W AII A+ N E L
Sbjct: 409 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 468
Query: 601 SLFDKMRNGGFTPNHFTFKVLLSICNQA----GFADEACRIFNVMSRGYKIEALEEHYLI 656
LF M P+ FTF +L C G + + + M+ +
Sbjct: 469 FLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGC------S 522
Query: 657 MIDILTRFGRIEEAHR 672
+ID+ ++ G IEEA +
Sbjct: 523 LIDMYSKCGMIEEAEK 538
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 140/316 (44%), Gaps = 20/316 (6%)
Query: 36 ATKPESTYFQKRKKYHTKKSAEKDAFPSSLPLHEKNPRAIYKD----IQRFARQNKLKEA 91
A K S +FQ+ T + EK +H K + + I + + + ++A
Sbjct: 536 AEKIHSRFFQRANVSGTMEELEK--------MHNKRLQEMCVSWNSIISGYVMKEQSEDA 587
Query: 92 LVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKM 151
++ M + GI + T+ ++ C S G+ IH + L+++ ++ + LV M
Sbjct: 588 QMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDM 647
Query: 152 YTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVY 211
Y+ CG D+ +F++S WNA++ G GK LF M + ++ N
Sbjct: 648 YSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILE--NIKPNHV 705
Query: 212 TFSCVIKSFAGASALMQGLKTHALLIKN-GFVDYLILRTSLIDMYFKCGKIKLARRVFDE 270
TF ++++ A + +GL+ ++ ++ G L ++++D+ K GK+K A + E
Sbjct: 706 TFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIRE 765
Query: 271 TG-DRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEA--WAR 327
+ D V+W +++ +R E + A + +S T+L V +A W +
Sbjct: 766 MPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEK 825
Query: 328 --KLGQEVHAYVLKNE 341
L + + + LK E
Sbjct: 826 VSDLRRNMRGFKLKKE 841
>sp|Q9SCT2|PP277_ARATH Pentatricopeptide repeat-containing protein At3g50420
OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1
Length = 794
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 167/587 (28%), Positives = 287/587 (48%), Gaps = 21/587 (3%)
Query: 103 IPVN--VTTFNALITACVRTRSLVEGRLIHTHIRINGL---ENNGFLRTKLVKMYTSCGS 157
+P+N ++ L CV L R IH + G + + L+ MY CGS
Sbjct: 88 MPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGS 147
Query: 158 FEDAEKVFDESSSESVYPWNALL----RGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTF 213
E A KVFD+ +V +NAL R A Y L +M V+ N TF
Sbjct: 148 LEQARKVFDKMPHRNVVSYNALYSAYSRNPDFAS---YAFPLTTHMAFEY--VKPNSSTF 202
Query: 214 SCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGD 273
+ +++ A ++ G ++ +IK G+ D ++++TS++ MY CG ++ ARR+FD +
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 274 RDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEV 333
RD V W +MI G N + L R M+ G+ P +I+L + + LG+ +
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 334 HAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGR 393
HA ++ ++ ++ L + ++L+DMYC C DM A+ VF N + W +++SG NG
Sbjct: 323 HARIIVSDSLAD-LPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGF 381
Query: 394 LEQAL---RSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSI 450
EQA+ R + M RPD T + I ++ + HGK +H K + +V +
Sbjct: 382 GEQAMLMYRRLLRMSTP--RPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFV 439
Query: 451 ITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKH 510
T+L+ MY K + + K+FD M+ R+V+ WT MI G + A+ F M K+
Sbjct: 440 GTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKN 499
Query: 511 RPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKL 570
R D +++ ++ + L+ G+ H ++ F V V + MYG G E A+
Sbjct: 500 RSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAET 559
Query: 571 VFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGF 630
+F W +++ AY + + ++ALS F+++ GF P+ T+ LL+ C+ G
Sbjct: 560 IFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGS 619
Query: 631 ADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRFREMS 677
+ ++N M + I+A +HY M++++++ G ++EA E S
Sbjct: 620 TLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQS 665
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 132/551 (23%), Positives = 252/551 (45%), Gaps = 21/551 (3%)
Query: 143 FLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNAL--LRGAVIAGKKRYRGV------ 194
+ L+ MY C S E A KVFD+ ++ L + V G + +
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 195 -LFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNG---FVDYLILRTS 250
+ +M + E+ + T CV + L + + HAL++ G + +
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCV-----SITVLKRARQIHALVLTAGAGAATESPYANNN 137
Query: 251 LIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHN-RLRWEALDCARWMIREGIYP 309
LI MY +CG ++ AR+VFD+ R++V + ++ + ++ N A M E + P
Sbjct: 138 LISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKP 197
Query: 310 NSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRV 369
NS T L+ V +G +++ ++K YS+ + V++S++ MY C D+ SA R+
Sbjct: 198 NSSTFTSLVQVCAVLEDVLMGSSLNSQIIK-LGYSDNVVVQTSVLGMYSSCGDLESARRI 256
Query: 370 FYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKAL 429
F R+ + W ++ G + N ++E L M G P T + V+ CS+L +
Sbjct: 257 FDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSY 316
Query: 430 NHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSC 489
+ GK IHA + + L ++ + +L+ MY CG + + +F + N++SW ++I C
Sbjct: 317 SLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGC 376
Query: 490 IENGRLDDALGVFRS-MQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASV 548
ENG + A+ ++R +++S RPD + +S + + + GK +HGQV K +
Sbjct: 377 SENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERS 436
Query: 549 PFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRN 608
FV + MY E A+ VFD + + + WT +I + + A+ F +M
Sbjct: 437 VFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYR 496
Query: 609 GGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIE 668
+ F+ ++ C+ + +F+ ++ + + ++D+ + G+ E
Sbjct: 497 EKNRSDGFSLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYE 555
Query: 669 EAHRFREMSSS 679
A ++S+
Sbjct: 556 TAETIFSLASN 566
Score = 172 bits (435), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 220/451 (48%), Gaps = 4/451 (0%)
Query: 91 ALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVK 150
A + +M + + N +TF +L+ C ++ G +++ I G +N ++T ++
Sbjct: 183 AFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLG 242
Query: 151 MYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNV 210
MY+SCG E A ++FD ++ WN ++ G+ + K G++F + M GV
Sbjct: 243 MYSSCGDLESARRIFDCVNNRDAVAWNTMIVGS-LKNDKIEDGLMF-FRNMLMSGVDPTQ 300
Query: 211 YTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDE 270
+T+S V+ + + G HA +I + + L L +L+DMY CG ++ A VF
Sbjct: 301 FTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGR 360
Query: 271 TGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGI-YPNSVVLTILLPVIGEAWARKL 329
+ ++V W S+I+G + N +A+ R ++R P+ + + E
Sbjct: 361 IHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVH 420
Query: 330 GQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYV 389
G+ +H V K Y +FV ++L+ MY K R+ SA +VF +ER+ +LWT ++ G+
Sbjct: 421 GKLLHGQVTK-LGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHS 479
Query: 390 SNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVS 449
G E A++ M +E R D ++++VI CS + L G+ H A++ F +S
Sbjct: 480 RLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMS 539
Query: 450 IITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSK 509
+ +L+ MY K G + + +F ++ W +M+ + ++G ++ AL F + +
Sbjct: 540 VCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENG 599
Query: 510 HRPDSVAMARMLSVSGQLKALKLGKEIHGQV 540
PD+V +L+ + GK + Q+
Sbjct: 600 FMPDAVTYLSLLAACSHRGSTLQGKFLWNQM 630
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 192/398 (48%), Gaps = 24/398 (6%)
Query: 243 DYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVV---------WGSMIAGFAHNRLRW 293
+Y +LI MY +C ++ AR+VFD+ R+IV + SM + ++
Sbjct: 20 EYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKL 79
Query: 294 EALDCARWMIREGIYPNSVVLT---ILLPVIGEAWARKLGQEVHAYVLK--NERYSEELF 348
+ +M I + V LT + + V+ K +++HA VL +E +
Sbjct: 80 GSFQMIFFMPLNEIASSVVELTRKCVSITVL------KRARQIHALVLTAGAGAATESPY 133
Query: 349 VRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQ-ALRSIAWMQQE 407
++L+ MY +C + A +VF + RN + + AL S Y N A M E
Sbjct: 134 ANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFE 193
Query: 408 GFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYS 467
+P+ T +++ VC+ L+ + G +++ +K + NV + TS++ MYS CG L+ +
Sbjct: 194 YVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESA 253
Query: 468 LKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQL 527
++FD + R+ ++W MI ++N +++D L FR+M +S P + +L+ +L
Sbjct: 254 RRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKL 313
Query: 528 KALKLGKEIHGQVLKKD-FASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAI 586
+ LGK IH +++ D A +P A + MY CG + A VF + ++W +I
Sbjct: 314 GSYSLGKLIHARIIVSDSLADLPLDNAL-LDMYCSCGDMREAFYVFGRIHNPNLVSWNSI 372
Query: 587 IEAYGYNDLCQEALSLFDK-MRNGGFTPNHFTFKVLLS 623
I N ++A+ ++ + +R P+ +TF +S
Sbjct: 373 ISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAIS 410
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 220/470 (46%), Gaps = 15/470 (3%)
Query: 84 RQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGF 143
+ +K+++ L+ M G+ T++ ++ C + S G+LIH I ++ +
Sbjct: 277 KNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLP 336
Query: 144 LRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRE 203
L L+ MY SCG +A VF + ++ WN+++ G G +++ + +R
Sbjct: 337 LDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRL-LRM 395
Query: 204 LGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKL 263
+ + YTFS I + A + G H + K G+ + + T+L+ MYFK + +
Sbjct: 396 STPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAES 455
Query: 264 ARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARW--MIREGIYPNSVVLTILLPVI 321
A++VFD +RD+V+W MI G H+RL L + M RE + L+ ++
Sbjct: 456 AQKVFDVMKERDVVLWTEMIVG--HSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGAC 513
Query: 322 GEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILW 381
+ + G+ H ++ + + V +LVDMY K +A +F + W
Sbjct: 514 SDMAMLRQGEVFHCLAIRTG-FDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCW 572
Query: 382 TALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVK 441
+++ Y +G +E+AL + + GF PD VT +++ CS + GK + +
Sbjct: 573 NSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE 632
Query: 442 NQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVIS--WTAMIDSCIENGRLDDAL 499
+ ++ + SK G++D +L+L ++ N + W ++ +C+ L +
Sbjct: 633 QGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQ--I 690
Query: 500 GVFRSMQLSKHRPDSVA----MARMLSVSGQLKAL-KLGKEIHGQVLKKD 544
G++ + Q+ K P+ A ++ + +V+G+ + + ++ ++I G KD
Sbjct: 691 GLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKD 740
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 144/307 (46%), Gaps = 20/307 (6%)
Query: 338 LKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMS--GYVSNG-RL 394
++ + +E + ++L+ MY +C + A +VF + +RN + L + YVS G L
Sbjct: 13 VETDAAAEYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSL 72
Query: 395 EQALRSIAWMQQEGFRPDVVTVATVIPV---CSQLKALNHGKEIHAY--------AVKNQ 443
+ + Q F P ++V+ + C + L ++IHA A ++
Sbjct: 73 HSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESP 132
Query: 444 FLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDD-ALGVF 502
+ N +L+ MY +CG L+ + K+FD+M RNV+S+ A+ + N A +
Sbjct: 133 YANN-----NLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLT 187
Query: 503 RSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMC 562
M +P+S ++ V L+ + +G ++ Q++K ++ V + MY C
Sbjct: 188 THMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSC 247
Query: 563 GFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLL 622
G LE A+ +FD V + ++ W +I ND ++ L F M G P FT+ ++L
Sbjct: 248 GDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVL 307
Query: 623 SICNQAG 629
+ C++ G
Sbjct: 308 NGCSKLG 314
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 133/399 (33%), Positives = 211/399 (52%), Gaps = 3/399 (0%)
Query: 279 WGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVL 338
W + A+ L E++ R M+R G P++ +L GQ++H +V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 339 KNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNE--ILWTALMSGYVSNGRLEQ 396
K +E FV ++L+ MYCKC + A +VF E + ++ + + AL+SGY +N ++
Sbjct: 81 KGGCETEP-FVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 397 ALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMI 456
A M++ G D VT+ ++P+C+ + L G+ +H VK V+++ S +
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 457 MYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVA 516
MY KCG ++ +LFDEM V+ +I+W A+I +NG D L ++ M+ S PD
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 517 MARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVP 576
+ +LS L A K+G E+ V F FV+ +I MY CG L A+ VFD +P
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 577 VKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACR 636
VK ++WTA+I YG + + + L LFD M G P+ F ++LS C+ +G D+
Sbjct: 320 VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE 379
Query: 637 IFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRFRE 675
+F M R YK+E EHY ++D+L R GR++EA F E
Sbjct: 380 LFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIE 418
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 197/424 (46%), Gaps = 7/424 (1%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
++ A Q+ E++ + M + G + +F ++ +C V G+ +H H+ G
Sbjct: 25 LRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGC 84
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDES--SSESVYPWNALLRGAVIAGKKRYRGVLF 196
E F+ T L+ MY CG DA KVF+E+ SS+ +NAL+ G K +F
Sbjct: 85 ETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMF 144
Query: 197 NYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYF 256
+M+E GV ++ T ++ L G H +K G + + S I MY
Sbjct: 145 R--RMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYM 202
Query: 257 KCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTI 316
KCG ++ RR+FDE + ++ W ++I+G++ N L ++ L+ M G+ P+ L
Sbjct: 203 KCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVS 262
Query: 317 LLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEER 376
+L A+K+G EV V N + +FV ++ + MY +C ++ A VF +
Sbjct: 263 VLSSCAHLGAKKIGHEVGKLVESNG-FVPNVFVSNASISMYARCGNLAKARAVFDIMPVK 321
Query: 377 NEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEI- 435
+ + WTA++ Y +G E L M + G RPD V+ CS + G E+
Sbjct: 322 SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELF 381
Query: 436 HAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVR-NVISWTAMIDSCIENGR 494
A + + P + L+ + + G LD +++ + M V + W A++ +C +
Sbjct: 382 RAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKN 441
Query: 495 LDDA 498
+D A
Sbjct: 442 VDMA 445
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 574 AVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSIC 625
AV S W + Y L E++SL+ M G +P+ F+F +L C
Sbjct: 12 AVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSC 63
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 239 bits (609), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 169/637 (26%), Positives = 300/637 (47%), Gaps = 33/637 (5%)
Query: 60 AFPSSLPLHEKNPRAIYKDIQ-------RFARQNKLKEALVILDYMDQQGI-PVNVTTFN 111
+FPS L K+ ++ I R L+ A+ LD M + GI P++ TF+
Sbjct: 7 SFPSPAKLPIKSQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFS 66
Query: 112 ALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDES--- 168
+L+ +C+R R G+L+H + +E + L L+ +Y+ G AE VF+
Sbjct: 67 SLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRF 126
Query: 169 SSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQ 228
V W+A++ A R + +++ ELG+ N Y ++ VI++ + + +
Sbjct: 127 GKRDVVSWSAMM--ACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGV 184
Query: 229 GLKTHALLIKNG-FVDYLILRTSLIDMYFKC-GKIKLARRVFDETGDRDIVVWGSMIA-- 284
G T L+K G F + + SLIDM+ K + A +VFD+ + ++V W MI
Sbjct: 185 GRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
Query: 285 ---GFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNE 341
GF +R+ LD M+ G + L+ + E LG+++H++ +++
Sbjct: 245 MQMGFPREAIRF-FLD----MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG 299
Query: 342 RYSEELFVRSSLVDMYCKCR---DMNSAWRVFYETEERNEILWTALMSGYVSNGRL-EQA 397
+ V SLVDMY KC ++ +VF E+ + + WTAL++GY+ N L +A
Sbjct: 300 LVDD---VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEA 356
Query: 398 LRSIAWMQQEG-FRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMI 456
+ + M +G P+ T ++ C L GK++ A K N S+ S++
Sbjct: 357 INLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVIS 416
Query: 457 MYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVA 516
M+ K ++ + + F+ + +N++S+ +D N + A + + + +
Sbjct: 417 MFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFT 476
Query: 517 MARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVP 576
A +LS + +++ G++IH QV+K + V I MY CG ++ A VF+ +
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536
Query: 577 VKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACR 636
+ I+WT++I + + L F++M G PN T+ +LS C+ G E R
Sbjct: 537 NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWR 596
Query: 637 IFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEAHRF 673
FN M +KI+ EHY M+D+L R G + +A F
Sbjct: 597 HFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 2/179 (1%)
Query: 53 KKSAEKDAFPSSLPLHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNA 112
K +DA + L EKN + + R ++A +L + ++ + V+ TF +
Sbjct: 420 KSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFAS 479
Query: 113 LITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSES 172
L++ S+ +G IH+ + GL N + L+ MY+ CGS + A +VF+ + +
Sbjct: 480 LLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRN 539
Query: 173 VYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLK 231
V W +++ G G VL + +M E GV+ N T+ ++ + + + +G +
Sbjct: 540 VISWTSMITGFAKHGFAIR--VLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWR 596
>sp|Q9SJ73|PP148_ARATH Pentatricopeptide repeat-containing protein At2g04860
OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=3
Length = 692
Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/543 (27%), Positives = 266/543 (48%), Gaps = 10/543 (1%)
Query: 129 IHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGK 188
+ TH+ +GL+ +++T L+ +Y G A+ +FDE WNAL+ G G
Sbjct: 72 VQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGY 131
Query: 189 KRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILR 248
+ LF + M + G + T ++ + QG H + K+G ++
Sbjct: 132 ECDAWKLF--IVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 249 TSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIY 308
+LI Y KC ++ A +F E D+ V W +MI ++ + L+ EA+ + M + +
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVE 249
Query: 309 PNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWR 368
+ V + LL A + +H V+K ++ + V +SLV Y +C + SA R
Sbjct: 250 ISPVTIINLLS------AHVSHEPLHCLVVKCGMVND-ISVVTSLVCAYSRCGCLVSAER 302
Query: 369 VFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKA 428
++ ++ + + T+++S Y G ++ A+ + +Q + D V + ++ C +
Sbjct: 303 LYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSH 362
Query: 429 LNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDS 488
++ G +H YA+K+ ++ L+ MYSK ++ L LF++++ +ISW ++I
Sbjct: 363 IDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISG 422
Query: 489 CIENGRLDDALGVFRSMQLSKHR-PDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFAS 547
C+++GR A VF M L+ PD++ +A +L+ QL L LGKE+HG L+ +F +
Sbjct: 423 CVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFEN 482
Query: 548 VPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMR 607
FV I MY CG A+ VF ++ + TW ++I Y + L ALS + +MR
Sbjct: 483 ENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMR 542
Query: 608 NGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRI 667
G P+ TF +LS CN GF DE F M + + I +HY +M+ +L R
Sbjct: 543 EKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLF 602
Query: 668 EEA 670
EA
Sbjct: 603 TEA 605
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 130/515 (25%), Positives = 233/515 (45%), Gaps = 14/515 (2%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
I ++R +A + M QQG + TT L+ C + + +GR +H +GL
Sbjct: 123 ICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGL 182
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNY 198
E + ++ L+ Y+ C AE +F E +S WN ++ +G + +F
Sbjct: 183 ELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFK- 241
Query: 199 MKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKC 258
M E V+++ T ++ + L H L++K G V+ + + TSL+ Y +C
Sbjct: 242 -NMFEKNVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRC 294
Query: 259 GKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILL 318
G + A R++ IV S+++ +A A+ + + ++V L +L
Sbjct: 295 GCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGIL 354
Query: 319 PVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNE 378
++ +G +H Y +K+ ++ L V + L+ MY K D+ + +F + +E
Sbjct: 355 HGCKKSSHIDIGMSLHGYAIKSGLCTKTLVV-NGLITMYSKFDDVETVLFLFEQLQETPL 413
Query: 379 ILWTALMSGYVSNGRLEQALRSIAWMQ-QEGFRPDVVTVATVIPVCSQLKALNHGKEIHA 437
I W +++SG V +GR A M G PD +T+A+++ CSQL LN GKE+H
Sbjct: 414 ISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHG 473
Query: 438 YAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDD 497
Y ++N F + T+L+ MY+KCG + +F ++ +W +MI +G
Sbjct: 474 YTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHR 533
Query: 498 ALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVA--AEN 555
AL + M+ +PD + +LS + GK I + + K+F P + A
Sbjct: 534 ALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGK-ICFRAMIKEFGISPTLQHYALM 592
Query: 556 IKMYG-MCGFLECAKLVFDAVPVKGSITWTAIIEA 589
+ + G C F E L++ S W A++ A
Sbjct: 593 VGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSA 627
Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 177/398 (44%), Gaps = 13/398 (3%)
Query: 274 RDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAW-ARKLGQE 332
RD+ + S++ H + + R ++R + PN ++I L ++ + KL E
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 333 VHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNG 392
L ++V++SL+++Y K + SA +F E ER+ ++W AL+ GY NG
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 393 RLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIIT 452
A + M Q+GF P T+ ++P C Q ++ G+ +H A K+ + +
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKN 190
Query: 453 SLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRP 512
+L+ YSKC L + LF EM+ ++ +SW MI + ++G ++A+ VF++M
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEI 250
Query: 513 DSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVF 572
V + +LS + L H V+K + V + Y CG L A+ ++
Sbjct: 251 SPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLY 304
Query: 573 DAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFAD 632
+ + T+I+ Y A+ F K R + +L C ++ D
Sbjct: 305 ASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHID 364
Query: 633 EACRIFNVMSRGYKIEA-LEEHYLIMIDILTRFGRIEE 669
+ GY I++ L L++ ++T + + ++
Sbjct: 365 IGMSL-----HGYAIKSGLCTKTLVVNGLITMYSKFDD 397
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 160/573 (27%), Positives = 282/573 (49%), Gaps = 15/573 (2%)
Query: 110 FNALITACVRTRS-LVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDES 168
F +++ AC +R L G +H I G++++ + T L+ MY G+ DAEKVFD
Sbjct: 103 FPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGM 162
Query: 169 SSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQ 228
+ W+ L+ + G+ L + M + GV+ + T V++ A L
Sbjct: 163 PVRDLVAWSTLVSSCLENGE--VVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRI 220
Query: 229 GLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAH 288
H + + F L SL+ MY KCG + + R+F++ ++ V W +MI+ +
Sbjct: 221 ARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNR 280
Query: 289 NRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELF 348
+AL MI+ GI PN V L +L G + G+ VH + ++ E
Sbjct: 281 GEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYES 340
Query: 349 VRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEG 408
+ +LV++Y +C ++ V +RN + W +L+S Y G + QAL M +
Sbjct: 341 LSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQR 400
Query: 409 FRPDVVTVATVIPVCSQLKALNHGKEIHAYAVK----NQFLPNVSIITSLMIMYSKCGVL 464
+PD T+A+ I C + GK+IH + ++ ++F+ N SL+ MYSK G +
Sbjct: 401 IKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQN-----SLIDMYSKSGSV 455
Query: 465 DYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVS 524
D + +F++++ R+V++W +M+ +NG +A+ +F M S + V ++
Sbjct: 456 DSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQAC 515
Query: 525 GQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWT 584
+ +L+ GK +H +++ + F I MY CG L A+ VF A+ + ++W+
Sbjct: 516 SSIGSLEKGKWVHHKLIISGLKDL-FTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWS 574
Query: 585 AIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRG 644
++I AYG + A+S F++M G PN F +LS C +G +E FN+M +
Sbjct: 575 SMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KS 633
Query: 645 YKIEALEEHYLIMIDILTRFGRIEEAHR-FREM 676
+ + EH+ ID+L+R G ++EA+R +EM
Sbjct: 634 FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEM 666
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/526 (27%), Positives = 266/526 (50%), Gaps = 10/526 (1%)
Query: 107 VTTFNALITACVRTRSLVEGRLIHTHIRING-LENNGFLRTKLVKMYTSCGSFEDAEKVF 165
+T + L +C R + + +H H+ + G L + TKL++ Y GS + + VF
Sbjct: 1 MTQYMPLFRSCSSLRLVSQ---LHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVF 57
Query: 166 DESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGA-S 224
+ + + L++ V + Y ++ Q++ + F V+++ AG+
Sbjct: 58 EAFPYPDSFMYGVLIKCNVWC--HLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSRE 115
Query: 225 ALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIA 284
L G K H +IK G D ++ TSL+ MY + G + A +VFD RD+V W ++++
Sbjct: 116 HLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVS 175
Query: 285 GFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYS 344
N +AL + M+ +G+ P++V + ++ E ++ + VH + +
Sbjct: 176 SCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDL 235
Query: 345 EELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWM 404
+E +SL+ MY KC D+ S+ R+F + ++N + WTA++S Y E+ALRS + M
Sbjct: 236 DETLC-NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM 294
Query: 405 QQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNV-SIITSLMIMYSKCGV 463
+ G P++VT+ +V+ C + + GK +H +AV+ + PN S+ +L+ +Y++CG
Sbjct: 295 IKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGK 354
Query: 464 LDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSV 523
L + + RN+++W ++I G + ALG+FR M + +PD+ +A +S
Sbjct: 355 LSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISA 414
Query: 524 SGQLKALKLGKEIHGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITW 583
+ LGK+IHG V++ D S FV I MY G ++ A VF+ + + +TW
Sbjct: 415 CENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTW 473
Query: 584 TAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAG 629
+++ + N EA+SLFD M + N TF ++ C+ G
Sbjct: 474 NSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIG 519
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 226/450 (50%), Gaps = 14/450 (3%)
Query: 90 EALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLV 149
+AL + M G+ + T +++ C L R +H I + + L L+
Sbjct: 185 KALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLL 244
Query: 150 KMYTSCGSFEDAEKVFDESSSESVYPWNALL----RGAVIAGKKRYRGVLFNYMKMRELG 205
MY+ CG +E++F++ + ++ W A++ RG +K R ++ +M + G
Sbjct: 245 TMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEF--SEKALR----SFSEMIKSG 298
Query: 206 VQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGF-VDYLILRTSLIDMYFKCGKIKLA 264
++ N+ T V+ S + +G H ++ +Y L +L+++Y +CGK+
Sbjct: 299 IEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDC 358
Query: 265 RRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEA 324
V DR+IV W S+I+ +AH + +AL R M+ + I P++ L + A
Sbjct: 359 ETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENA 418
Query: 325 WARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEILWTAL 384
LG+++H +V++ + E FV++SL+DMY K ++SA VF + + R+ + W ++
Sbjct: 419 GLVPLGKQIHGHVIRTDVSDE--FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSM 476
Query: 385 MSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQF 444
+ G+ NG +A+ +M + VT VI CS + +L GK +H + +
Sbjct: 477 LCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG- 535
Query: 445 LPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRS 504
L ++ T+L+ MY+KCG L+ + +F M R+++SW++MI++ +GR+ A+ F
Sbjct: 536 LKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQ 595
Query: 505 MQLSKHRPDSVAMARMLSVSGQLKALKLGK 534
M S +P+ V +LS G +++ GK
Sbjct: 596 MVESGTKPNEVVFMNVLSACGHSGSVEEGK 625
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 198/435 (45%), Gaps = 17/435 (3%)
Query: 69 EKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRL 128
+KN + I + R ++AL M + GI N+ T +++++C + EG+
Sbjct: 265 KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKS 324
Query: 129 IHTH-IRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALL-----RG 182
+H +R N L LV++Y CG D E V S ++ WN+L+ RG
Sbjct: 325 VHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRG 384
Query: 183 AVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFV 242
VI +R +M ++ + +T + I + A + G + H +I+
Sbjct: 385 MVIQALGLFR-------QMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS 437
Query: 243 DYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWM 302
D + + SLIDMY K G + A VF++ R +V W SM+ GF+ N EA+ +M
Sbjct: 438 DEFV-QNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYM 496
Query: 303 IREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRD 362
+ N V ++ + + G+ VH ++ + ++LF ++L+DMY KC D
Sbjct: 497 YHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL--KDLFTDTALIDMYAKCGD 554
Query: 363 MNSAWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPV 422
+N+A VF R+ + W+++++ Y +GR+ A+ + M + G +P+ V V+
Sbjct: 555 LNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSA 614
Query: 423 CSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEME-VRNVIS 481
C ++ GK PN + + S+ G L + + EM + +
Sbjct: 615 CGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASV 674
Query: 482 WTAMIDSCIENGRLD 496
W ++++ C + ++D
Sbjct: 675 WGSLVNGCRIHQKMD 689
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 169/357 (47%), Gaps = 1/357 (0%)
Query: 314 LTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYET 373
+T +P+ + +L ++HA++L R + + L++ Y +S+ VF
Sbjct: 1 MTQYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAF 60
Query: 374 EERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKA-LNHG 432
+ ++ L+ V L+ A+ + E + +V+ C+ + L+ G
Sbjct: 61 PYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVG 120
Query: 433 KEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIEN 492
++H +K + I TSL+ MY + G L + K+FD M VR++++W+ ++ SC+EN
Sbjct: 121 GKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLEN 180
Query: 493 GRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVA 552
G + AL +F+ M PD+V M ++ +L L++ + +HGQ+ +K F +
Sbjct: 181 GEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLC 240
Query: 553 AENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFT 612
+ MY CG L ++ +F+ + K +++WTA+I +Y + ++AL F +M G
Sbjct: 241 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE 300
Query: 613 PNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLIMIDILTRFGRIEE 669
PN T +LS C G E + R E L ++++ G++ +
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSD 357
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 158/523 (30%), Positives = 255/523 (48%), Gaps = 13/523 (2%)
Query: 163 KVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAG 222
+++ S SV WN +R AV +LF +M+ G + N +TF V K+ A
Sbjct: 7 RLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFR--EMKRGGFEPNNFTFPFVAKACAR 64
Query: 223 ASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSM 282
+ + HA LIK+ F + + T+ +DM+ KC + A +VF+ +RD W +M
Sbjct: 65 LADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAM 124
Query: 283 IAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNER 342
++GF + +A R M I P+SV + L+ + KL + +HA ++
Sbjct: 125 LSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIR-LG 183
Query: 343 YSEELFVRSSLVDMYCKCRDMNSAWRVFYETE--ERNEILWTALMSGYVSNGRLEQALRS 400
++ V ++ + Y KC D++SA VF + +R + W ++ Y G A
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGL 243
Query: 401 IAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSK 460
M +E F+PD+ T + C + L G+ IH++A+ ++ I + + MYSK
Sbjct: 244 YCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSK 303
Query: 461 CGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARM 520
+ LFD M R +SWT MI E G +D+AL +F +M S +PD V + +
Sbjct: 304 SEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSL 363
Query: 521 LSVSGQLKALKLGKEIHGQV----LKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVP 576
+S G+ +L+ GK I + K+D + I MY CG + A+ +FD P
Sbjct: 364 ISGCGKFGSLETGKWIDARADIYGCKRDNV---MICNALIDMYSKCGSIHEARDIFDNTP 420
Query: 577 VKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTFKVLLSICNQAGFADEACR 636
K +TWT +I Y N + EAL LF KM + + PNH TF +L C +G ++
Sbjct: 421 EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE 480
Query: 637 IFNVMSRGYKIEALEEHYLIMIDILTRFGRIEEA-HRFREMSS 678
F++M + Y I +HY M+D+L R G++EEA R MS+
Sbjct: 481 YFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSA 523
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/553 (25%), Positives = 240/553 (43%), Gaps = 45/553 (8%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGL 138
I+ +N E+L++ M + G N TF + AC R + ++H H+ +
Sbjct: 24 IREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPF 83
Query: 139 ENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVLFNY 198
++ F+ T V M+ C S + A KVF+ WNA+L G +G LF
Sbjct: 84 WSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFRE 143
Query: 199 MKMRELGVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYLILRTSLIDMYFKC 258
M++ E + + T +I+S + +L HA+ I+ G + + + I Y KC
Sbjct: 144 MRLNE--ITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKC 201
Query: 259 GKIKLARRVFD--ETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTI 316
G + A+ VF+ + GDR +V W SM ++ ++A M+RE P+
Sbjct: 202 GDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFIN 261
Query: 317 LLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEER 376
L G+ +H++ + + +++ ++ + MY K D SA +F R
Sbjct: 262 LAASCQNPETLTQGRLIHSHAI-HLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSR 320
Query: 377 NEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIH 436
+ WT ++SGY G +++AL M + G +PD+VT+ ++I C + +L GK I
Sbjct: 321 TCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWID 380
Query: 437 A----YAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIEN 492
A Y K NV I +L+ MYSKCG + + +FD + V++WT MI N
Sbjct: 381 ARADIYGCKRD---NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALN 437
Query: 493 GRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFASVPFVA 552
G +AL +F M ++P+ + +L +L+ G E
Sbjct: 438 GIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE----------------- 480
Query: 553 AENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFT 612
+ K V++ P G ++ +++ G +EAL L +RN
Sbjct: 481 -----------YFHIMKQVYNISP--GLDHYSCMVDLLGRKGKLEEALEL---IRNMSAK 524
Query: 613 PNHFTFKVLLSIC 625
P+ + LL+ C
Sbjct: 525 PDAGIWGALLNAC 537
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 236 bits (602), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 184/619 (29%), Positives = 293/619 (47%), Gaps = 19/619 (3%)
Query: 70 KNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALIT-ACVRTRSLVEGRL 128
KN + I +++ + A I M G TF +L+T AC T V RL
Sbjct: 169 KNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDV--RL 226
Query: 129 ---IHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVI 185
I I+ +GL + F+ + LV + GS A KVF++ + + N L+ G V
Sbjct: 227 LEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVR 286
Query: 186 AGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSF-----AGASALMQGLKTHALLIKNG 240
LF M M + + ++ ++ ++ SF A L +G + H +I G
Sbjct: 287 QKWGEEATKLF--MDMNSM-IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTG 343
Query: 241 FVDYLI-LRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCA 299
VD+++ + L++MY KCG I ARRVF D+D V W SMI G N EA++
Sbjct: 344 LVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERY 403
Query: 300 RWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCK 359
+ M R I P S L L KLGQ++H LK + V ++L+ +Y +
Sbjct: 404 KSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK-LGIDLNVSVSNALMTLYAE 462
Query: 360 CRDMNSAWRVFYETEERNEILWTALMSGYVSNGR-LEQALRSIAWMQQEGFRPDVVTVAT 418
+N ++F E +++ W +++ + R L +A+ Q+ G + + +T ++
Sbjct: 463 TGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSS 522
Query: 419 VIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEM-EVR 477
V+ S L GK+IH A+KN + +L+ Y KCG +D K+F M E R
Sbjct: 523 VLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERR 582
Query: 478 NVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIH 537
+ ++W +MI I N L AL + M + R DS A +LS + L+ G E+H
Sbjct: 583 DNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVH 642
Query: 538 GQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQ 597
++ S V + + MY CG L+ A F+ +PV+ S +W ++I Y + +
Sbjct: 643 ACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGE 702
Query: 598 EALSLFDKMRNGGFT-PNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEALEEHYLI 656
EAL LF+ M+ G T P+H TF +LS C+ AG +E + F MS Y + EH+
Sbjct: 703 EALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSC 762
Query: 657 MIDILTRFGRIEEAHRFRE 675
M D+L R G +++ F E
Sbjct: 763 MADVLGRAGELDKLEDFIE 781
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 158/619 (25%), Positives = 291/619 (47%), Gaps = 40/619 (6%)
Query: 79 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITAC--VRTRSLVEGRLIHTHIRIN 136
+ ++R + KEALV L M ++GI N F +++ AC + + ++ GR IH +
Sbjct: 74 VSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKL 133
Query: 137 GLENNGFLRTKLVKMYTSC-GSFEDAEKVFDESSSESVYPWNALLRGAVIAGKKRYRGVL 195
+ + L+ MY C GS A F + ++ WN+++ AG +R +
Sbjct: 134 SYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRI 193
Query: 196 FNYMKMRELGVQLNVYTFSCVIKSFAGASA----LMQGLKTHALLIKNGFVDYLILRTSL 251
F+ M+ G + YTF ++ + + L++ + + K+G + L + + L
Sbjct: 194 FSSMQYD--GSRPTEYTFGSLVTTACSLTEPDVRLLE--QIMCTIQKSGLLTDLFVGSGL 249
Query: 252 IDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREG---IY 308
+ + K G + AR+VF++ R+ V ++ G R +W +M +
Sbjct: 250 VSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLV--RQKWGEEATKLFMDMNSMIDVS 307
Query: 309 PNS-VVLTILLP--VIGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNS 365
P S V+L P + E K G+EVH +V+ + + + LV+MY KC +
Sbjct: 308 PESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIAD 367
Query: 366 AWRVFYETEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQ 425
A RVFY +++ + W ++++G NG +A+ M++ P T+ + + C+
Sbjct: 368 ARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCAS 427
Query: 426 LKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAM 485
LK G++IH ++K NVS+ +LM +Y++ G L+ K+F M + +SW ++
Sbjct: 428 LKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSI 487
Query: 486 IDSCIENGR-LDDALGVFRSMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKD 544
I + + R L +A+ F + Q + + + + + +LS L +LGK+IHG LK +
Sbjct: 488 IGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNN 547
Query: 545 FASVPFVAAENIKMYGMCGFLE-CAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLF 603
A I YG CG ++ C K+ + ++TW ++I Y +N+L +AL L
Sbjct: 548 IADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLV 607
Query: 604 DKMRNGGFTPNHFTFKVLLSICNQAGFADEACRIFNVMSRGYKIEA------LEEHYLI- 656
M G + F + +LS FA A + RG ++ A LE ++
Sbjct: 608 WFMLQTGQRLDSFMYATVLS-----AFASVA-----TLERGMEVHACSVRACLESDVVVG 657
Query: 657 --MIDILTRFGRIEEAHRF 673
++D+ ++ GR++ A RF
Sbjct: 658 SALVDMYSKCGRLDYALRF 676
Score = 179 bits (453), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 134/484 (27%), Positives = 230/484 (47%), Gaps = 31/484 (6%)
Query: 123 LVEGRLIHTHIRINGLEN------NGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPW 176
L +GR +H H+ GL + NG LV MY CGS DA +VF + + W
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNG-----LVNMYAKCGSIADARRVFYFMTDKDSVSW 383
Query: 177 NALL-----RGAVIAGKKRYRGVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGLK 231
N+++ G I +RY+ MR + +T + S A G +
Sbjct: 384 NSMITGLDQNGCFIEAVERYK-------SMRRHDILPGSFTLISSLSSCASLKWAKLGQQ 436
Query: 232 THALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDETGDRDIVVWGSMIAGFAHN-R 290
H +K G + + +L+ +Y + G + R++F + D V W S+I A + R
Sbjct: 437 IHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSER 496
Query: 291 LRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFVR 350
EA+ C R G N + + +L + +LG+++H LKN ++E
Sbjct: 497 SLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNN-IADEATTE 555
Query: 351 SSLVDMYCKCRDMNSAWRVFYE-TEERNEILWTALMSGYVSNGRLEQALRSIAWMQQEGF 409
++L+ Y KC +M+ ++F E R+ + W +++SGY+ N L +AL + +M Q G
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQ 615
Query: 410 RPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSIITSLMIMYSKCGVLDYSLK 469
R D ATV+ + + L G E+HA +V+ +V + ++L+ MYSKCG LDY+L+
Sbjct: 616 RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALR 675
Query: 470 LFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHR-PDSVAMARMLSVSGQLK 528
F+ M VRN SW +MI +G+ ++AL +F +M+L PD V +LS
Sbjct: 676 FFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAG 735
Query: 529 ALKLGKEIHGQVLKKDFASVPFVAAENI--KMYGMCGFLECAKLVFDAVPVKGSI-TWTA 585
L+ G + H + + + P + + + G G L+ + + +P+K ++ W
Sbjct: 736 LLEEGFK-HFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRT 794
Query: 586 IIEA 589
++ A
Sbjct: 795 VLGA 798
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 197/427 (46%), Gaps = 19/427 (4%)
Query: 214 SCVIKSFAGASALMQGLKT--HALLIKNGFVDYLILRTSLIDMYFKCGKIKLARRVFDET 271
+CV SF + +G H+ L KN + L +LI+ Y + G AR+VFDE
Sbjct: 3 NCVPLSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEM 62
Query: 272 GDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKL-- 329
R+ V W +++G++ N EAL R M++EGI+ N +L E + +
Sbjct: 63 PLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILF 122
Query: 330 GQEVHAYVLKNERYSEELFVRSSLVDMYCKC-RDMNSAWRVFYETEERNEILWTALMSGY 388
G+++H + K Y+ + V + L+ MY KC + A F + E +N + W +++S Y
Sbjct: 123 GRQIHGLMFK-LSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVY 181
Query: 389 VSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKA--LNHGKEIHAYAVKNQFLP 446
G A R + MQ +G RP T +++ L + ++I K+ L
Sbjct: 182 SQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLT 241
Query: 447 NVSIITSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQ 506
++ + + L+ ++K G L Y+ K+F++ME RN ++ ++ + ++A +F M
Sbjct: 242 DLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN 301
Query: 507 -LSKHRPDSVAMARMLSVSGQLK-----ALKLGKEIHGQVLKKDFASVPFVAAEN--IKM 558
+ P+S + +LS + LK G+E+HG V+ V N + M
Sbjct: 302 SMIDVSPESYVI--LLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDF-MVGIGNGLVNM 358
Query: 559 YGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFDKMRNGGFTPNHFTF 618
Y CG + A+ VF + K S++W ++I N EA+ + MR P FT
Sbjct: 359 YAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTL 418
Query: 619 KVLLSIC 625
LS C
Sbjct: 419 ISSLSSC 425
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%)
Query: 537 HGQVLKKDFASVPFVAAENIKMYGMCGFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLC 596
H ++ K ++ I Y G A+ VFD +P++ ++W I+ Y N
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 597 QEALSLFDKMRNGGFTPNHFTFKVLLSICNQAG 629
+EAL M G N + F +L C + G
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIG 116
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 241,367,377
Number of Sequences: 539616
Number of extensions: 9701216
Number of successful extensions: 38613
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 364
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 29210
Number of HSP's gapped (non-prelim): 2815
length of query: 681
length of database: 191,569,459
effective HSP length: 124
effective length of query: 557
effective length of database: 124,657,075
effective search space: 69433990775
effective search space used: 69433990775
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 65 (29.6 bits)