BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047576
(602 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 38/263 (14%)
Query: 373 SKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETE--ELAF-----------------IR 413
+K +G G +G VYK +L +G + A+K+L T+ EL F +R
Sbjct: 34 NKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 93
Query: 414 SF----RNEAQVLSQMERGSLFRILHNDAEAVE-LDWAKRVNIVKAMAHALAYLHHDCSP 468
F V M GS+ L E+ LDW KR I A LAYLH C P
Sbjct: 94 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDP 153
Query: 469 SVVHRDISSNNILLNSKLEAFVADFGTARLL-HADSSNQTLLAGSYGYIAPELAYTMVMT 527
++HRD+ + NILL+ + EA V DFG A+L+ + D + G G+IAPE T +
Sbjct: 154 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSS 213
Query: 528 EKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLID-----VLDQRLPPPVDRKVI 582
EK DV+ +GV+ LE++ G+ DL + D +ML+D + +++L VD +
Sbjct: 214 EKTDVFGYGVMLLELITGQRAFDLARL---ANDDDVMLLDWVKGLLKEKKLEALVDVDLQ 270
Query: 583 -----QDILLVSTISFACLQSNP 600
+++ + ++ C QS+P
Sbjct: 271 GNYKDEEVEQLIQVALLCTQSSP 293
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 131/263 (49%), Gaps = 38/263 (14%)
Query: 373 SKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETE--ELAF-----------------IR 413
+K +G G +G VYK +L +G + A+K+L + EL F +R
Sbjct: 42 NKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLR 101
Query: 414 SF----RNEAQVLSQMERGSLFRILHNDAEAVE-LDWAKRVNIVKAMAHALAYLHHDCSP 468
F V M GS+ L E+ LDW KR I A LAYLH C P
Sbjct: 102 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDP 161
Query: 469 SVVHRDISSNNILLNSKLEAFVADFGTARLL-HADSSNQTLLAGSYGYIAPELAYTMVMT 527
++HRD+ + NILL+ + EA V DFG A+L+ + D + G+ G+IAPE T +
Sbjct: 162 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSS 221
Query: 528 EKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLID-----VLDQRLPPPVDRKVI 582
EK DV+ +GV+ LE++ G+ DL + L++ D +ML+D + +++L VD +
Sbjct: 222 EKTDVFGYGVMLLELITGQRAFDL-ARLAN--DDDVMLLDWVKGLLKEKKLEALVDVDLQ 278
Query: 583 -----QDILLVSTISFACLQSNP 600
+++ + ++ C QS+P
Sbjct: 279 GNYKDEEVEQLIQVALLCTQSSP 301
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 160/351 (45%), Gaps = 31/351 (8%)
Query: 143 FTGSIPSE-ISALSKLQLLDLSSNRLRGRL----TNLNYMSL-----SRNMLGGLLPQEI 192
F+G +P + + + L++LDLS N G L TNL+ L S N G +LP
Sbjct: 327 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 386
Query: 193 GNLKN-LIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSG-LPQEIGNLKNLMLLDV 250
N KN L EL + +N G IP TLS + L L L+ N LSG +P +G+L L L +
Sbjct: 387 QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 446
Query: 251 GNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQ 310
N + G IP L L L L N IP+ L+ T L + LS+N+L+G+IP
Sbjct: 447 WLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKW 506
Query: 311 IASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYSNKHLSSMPTPRK 370
I +E+L L LSNN+ G+IP E+ L +L+L+ N +G +P + S
Sbjct: 507 IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 566
Query: 371 IDSK---YCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER 427
I K Y G + A G + + + S + L S RN + S++
Sbjct: 567 IAGKRYVYIKNDGMKKECHGA----GNLLEFQGIRSEQLNRL----STRNPCNITSRVYG 618
Query: 428 GSLFRILHNDAEAVELDWAKRV--NIVKAMAHALAYL------HHDCSPSV 470
G N+ + LD + + + ++ YL H+D S S+
Sbjct: 619 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSI 669
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 123/264 (46%), Gaps = 38/264 (14%)
Query: 131 LESLRILAYYDG-FTGSIPSEIS-ALSKLQLLDLSSNRLRG------------------- 169
L+SL+ L+ + FTG IP +S A L LDLS N G
Sbjct: 265 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 324
Query: 170 -------------RLTNLNYMSLSRNMLGGLLPQEIGNLK-NLIELDVGDNSLIGPIPLT 215
++ L + LS N G LP+ + NL +L+ LD+ N+ GPI
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 384
Query: 216 LSR--LTSLKILILAQNQLSG-LPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYL 272
L + +L+ L L N +G +P + N L+ L + N + G IPS+LG S L L
Sbjct: 385 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 444
Query: 273 DLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIP 332
L N IP EL + L L L N L+G+IPS +++ +L W+ LSNN + G IP
Sbjct: 445 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 504
Query: 333 GEITKLSRLDYLNLSGNKLSGRVP 356
I +L L L LS N SG +P
Sbjct: 505 KWIGRLENLAILKLSNNSFSGNIP 528
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 123/258 (47%), Gaps = 36/258 (13%)
Query: 131 LESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNM 183
LE+L IL + D TG IPS +S + L + LS+NRL G RL NL + LS N
Sbjct: 465 LETL-ILDFND-LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNS 522
Query: 184 LGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTL--------SRLTSLKILILAQNQLSGL 235
G +P E+G+ ++LI LD+ N G IP + + + K + +N G+
Sbjct: 523 FSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKND--GM 580
Query: 236 PQEIGNLKNLMLL-----------------DVGNNDIIGPIPSTLGLFSDLSYLDLSCNQ 278
+E NL+ ++ + G T + +LD+S N
Sbjct: 581 KKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNM 640
Query: 279 FNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKL 338
+ IP E+ + LF L+L N +SG IP ++ + L LDLS+N + G IP ++ L
Sbjct: 641 LSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 700
Query: 339 SRLDYLNLSGNKLSGRVP 356
+ L ++LS N LSG +P
Sbjct: 701 TMLTEIDLSNNNLSGPIP 718
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 101/193 (52%), Gaps = 18/193 (9%)
Query: 174 LNYMSLSRNMLGGLLPQ--EIGNLKNLIELDVGDNSLIGPIPLTLS-RLTSLKILILAQN 230
L + LSRN L G + +G+ L L+V N+L P ++ +L SL++L L+ N
Sbjct: 99 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 158
Query: 231 QLSG-------LPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSI 283
+SG L G LK+L + N I G + + + +L +LD+S N F++ I
Sbjct: 159 SISGANVVGWVLSDGCGELKHLA---ISGNKISGDVDVSRCV--NLEFLDVSSNNFSTGI 213
Query: 284 PNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDY 343
P L + L HLD+S NKLSG I++ +L L++S+N G IP L L Y
Sbjct: 214 P-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP--PLPLKSLQY 270
Query: 344 LNLSGNKLSGRVP 356
L+L+ NK +G +P
Sbjct: 271 LSLAENKFTGEIP 283
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 49/248 (19%)
Query: 147 IPSEISA---LSKLQLLDLSSNRLRGRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDV 203
P ++S L+ L++LDLS+N + G N++G +L G LK+L +
Sbjct: 137 FPGKVSGGLKLNSLEVLDLSANSISGA-----------NVVGWVLSDGCGELKHLA---I 182
Query: 204 GDNSLIGPIPLTLSRLTSLKILILAQNQLS-GLPQEIGNLKNLMLLDVGNNDIIGPIPST 262
N + G + +SR +L+ L ++ N S G+P +G+ L LD+ N + G
Sbjct: 183 SGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRA 239
Query: 263 LGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMED-LTWLD 321
+ ++L L++S NQF IP L L +L L+ NK +G+IP ++ D LT LD
Sbjct: 240 ISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLD 297
Query: 322 LSNNNIKGSIP--------------------GEIT-----KLSRLDYLNLSGNKLSGRVP 356
LS N+ G++P GE+ K+ L L+LS N+ SG +P
Sbjct: 298 LSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELP 357
Query: 357 YSNKHLSS 364
S +LS+
Sbjct: 358 ESLTNLSA 365
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 28/119 (23%)
Query: 245 LMLLDVGNNDIIGPIPS--TLGLFSDLSYLDLSCNQFNSSIPNELT---RLTQLFHLDLS 299
L LD+ N + GP+ + +LG S L +L++S N + P +++ +L L LDLS
Sbjct: 99 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD--FPGKVSGGLKLNSLEVLDLS 156
Query: 300 SNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYS 358
+N +SG N+ G + + L +L +SGNK+SG V S
Sbjct: 157 ANSISGA-------------------NVVGWVLSD--GCGELKHLAISGNKISGDVDVS 194
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 165/364 (45%), Gaps = 33/364 (9%)
Query: 143 FTGSIPSE-ISALSKLQLLDLSSNRLRGRL----TNLNYMSL-----SRNMLGGLLPQEI 192
F+G +P + + + L++LDLS N G L TNL+ L S N G +LP
Sbjct: 330 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 389
Query: 193 GNLKN-LIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSG-LPQEIGNLKNLMLLDV 250
N KN L EL + +N G IP TLS + L L L+ N LSG +P +G+L L L +
Sbjct: 390 QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 449
Query: 251 GNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQ 310
N + G IP L L L L N IP+ L+ T L + LS+N+L+G+IP
Sbjct: 450 WLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKW 509
Query: 311 IASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYSNKHLSSMPTPRK 370
I +E+L L LSNN+ G+IP E+ L +L+L+ N +G +P + S
Sbjct: 510 IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 569
Query: 371 IDSK---YCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER 427
I K Y G + A G + + + S + L S RN + S++
Sbjct: 570 IAGKRYVYIKNDGMKKECHGA----GNLLEFQGIRSEQLNRL----STRNPCNITSRVYG 621
Query: 428 GSLFRILHNDAEAVELDWAKRV--NIVKAMAHALAYL------HHDCSPSVVHR--DISS 477
G N+ + LD + + + ++ YL H+D S S+ D+
Sbjct: 622 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRG 681
Query: 478 NNIL 481
NIL
Sbjct: 682 LNIL 685
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 123/264 (46%), Gaps = 38/264 (14%)
Query: 131 LESLRILAYYDG-FTGSIPSEIS-ALSKLQLLDLSSNRLRG------------------- 169
L+SL+ L+ + FTG IP +S A L LDLS N G
Sbjct: 268 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 327
Query: 170 -------------RLTNLNYMSLSRNMLGGLLPQEIGNLK-NLIELDVGDNSLIGPIPLT 215
++ L + LS N G LP+ + NL +L+ LD+ N+ GPI
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387
Query: 216 LSR--LTSLKILILAQNQLSG-LPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYL 272
L + +L+ L L N +G +P + N L+ L + N + G IPS+LG S L L
Sbjct: 388 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 447
Query: 273 DLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIP 332
L N IP EL + L L L N L+G+IPS +++ +L W+ LSNN + G IP
Sbjct: 448 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507
Query: 333 GEITKLSRLDYLNLSGNKLSGRVP 356
I +L L L LS N SG +P
Sbjct: 508 KWIGRLENLAILKLSNNSFSGNIP 531
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 123/258 (47%), Gaps = 36/258 (13%)
Query: 131 LESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNM 183
LE+L IL + D TG IPS +S + L + LS+NRL G RL NL + LS N
Sbjct: 468 LETL-ILDFND-LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNS 525
Query: 184 LGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTL--------SRLTSLKILILAQNQLSGL 235
G +P E+G+ ++LI LD+ N G IP + + + K + +N G+
Sbjct: 526 FSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKND--GM 583
Query: 236 PQEIGNLKNLMLL-----------------DVGNNDIIGPIPSTLGLFSDLSYLDLSCNQ 278
+E NL+ ++ + G T + +LD+S N
Sbjct: 584 KKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNM 643
Query: 279 FNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKL 338
+ IP E+ + LF L+L N +SG IP ++ + L LDLS+N + G IP ++ L
Sbjct: 644 LSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 703
Query: 339 SRLDYLNLSGNKLSGRVP 356
+ L ++LS N LSG +P
Sbjct: 704 TMLTEIDLSNNNLSGPIP 721
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 31/210 (14%)
Query: 155 SKLQLLDLSSNRLRGRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPL 214
+ L LDLS N L G +T L +G+ L L+V N+L P +
Sbjct: 100 ASLTSLDLSRNSLSGPVTTL---------------TSLGSCSGLKFLNVSSNTLDFPGKV 144
Query: 215 TLS-RLTSLKILILAQNQLSG-------LPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLF 266
+ +L SL++L L+ N +SG L G LK+L + N I G + + +
Sbjct: 145 SGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLA---ISGNKISGDVDVSRCV- 200
Query: 267 SDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNN 326
+L +LD+S N F++ IP L + L HLD+S NKLSG I++ +L L++S+N
Sbjct: 201 -NLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQ 258
Query: 327 IKGSIPGEITKLSRLDYLNLSGNKLSGRVP 356
G IP L L YL+L+ NK +G +P
Sbjct: 259 FVGPIP--PLPLKSLQYLSLAENKFTGEIP 286
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 49/248 (19%)
Query: 147 IPSEISA---LSKLQLLDLSSNRLRGRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDV 203
P ++S L+ L++LDLS+N + G N++G +L G LK+L +
Sbjct: 140 FPGKVSGGLKLNSLEVLDLSANSISGA-----------NVVGWVLSDGCGELKHLA---I 185
Query: 204 GDNSLIGPIPLTLSRLTSLKILILAQNQLS-GLPQEIGNLKNLMLLDVGNNDIIGPIPST 262
N + G + +SR +L+ L ++ N S G+P +G+ L LD+ N + G
Sbjct: 186 SGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRA 242
Query: 263 LGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMED-LTWLD 321
+ ++L L++S NQF IP L L +L L+ NK +G+IP ++ D LT LD
Sbjct: 243 ISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLD 300
Query: 322 LSNNNIKGSIP--------------------GEIT-----KLSRLDYLNLSGNKLSGRVP 356
LS N+ G++P GE+ K+ L L+LS N+ SG +P
Sbjct: 301 LSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELP 360
Query: 357 YSNKHLSS 364
S +LS+
Sbjct: 361 ESLTNLSA 368
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 28/119 (23%)
Query: 245 LMLLDVGNNDIIGPIPS--TLGLFSDLSYLDLSCNQFNSSIPNELT---RLTQLFHLDLS 299
L LD+ N + GP+ + +LG S L +L++S N + P +++ +L L LDLS
Sbjct: 102 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD--FPGKVSGGLKLNSLEVLDLS 159
Query: 300 SNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYS 358
+N +SG N+ G + + L +L +SGNK+SG V S
Sbjct: 160 ANSISGA-------------------NVVGWVLSD--GCGELKHLAISGNKISGDVDVS 197
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 103/204 (50%), Gaps = 34/204 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEE-----------LAFIR------ 413
D K+ IG G +G VYK L +G ALK+ +PE+ + L+F R
Sbjct: 41 FDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETEIETLSFCRHPHLVS 99
Query: 414 -----SFRNEAQVLSQ-MERGSLFRILH-NDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
RNE ++ + ME G+L R L+ +D + + W +R+ I A L YLH
Sbjct: 100 LIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH--- 156
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQT----LLAGSYGYIAPELAY 522
+ +++HRD+ S NILL+ + DFG ++ +QT ++ G+ GYI PE
Sbjct: 157 TRAIIHRDVKSINILLDENFVPKITDFGISK--KGTELDQTHLXXVVKGTLGYIDPEYFI 214
Query: 523 TMVMTEKYDVYSFGVVTLEVLMGK 546
+TEK DVYSFGVV EVL +
Sbjct: 215 KGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 102/204 (50%), Gaps = 34/204 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEE-----------LAFIR------ 413
D K+ IG G +G VYK L +G ALK+ +PE+ + L+F R
Sbjct: 41 FDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETEIETLSFCRHPHLVS 99
Query: 414 -----SFRNEAQVLSQ-MERGSLFRILH-NDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
RNE ++ + ME G+L R L+ +D + + W +R+ I A L YLH
Sbjct: 100 LIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH--- 156
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQT----LLAGSYGYIAPELAY 522
+ +++HRD+ S NILL+ + DFG ++ QT ++ G+ GYI PE
Sbjct: 157 TRAIIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXVVKGTLGYIDPEYFI 214
Query: 523 TMVMTEKYDVYSFGVVTLEVLMGK 546
+TEK DVYSFGVV EVL +
Sbjct: 215 KGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 26/199 (13%)
Query: 374 KYCIGTGAYGSVYKAQLPNGRVFALKKLNSPE---------TEELAFIRSFRNEAQVL-- 422
K IG G++G+V++A+ +G A+K L + E+A ++ R+ VL
Sbjct: 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 423 -------------SQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
+ RGSL+R+LH +LD +R+++ +A + YLH+ +P
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPP 159
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
+VHRD+ S N+L++ K V DFG +RL + AG+ ++APE+ EK
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEK 219
Query: 530 YDVYSFGVVTLEVLMGKHP 548
DVYSFGV+ E+ + P
Sbjct: 220 SDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 26/199 (13%)
Query: 374 KYCIGTGAYGSVYKAQLPNGRVFALKKLNSPE---------TEELAFIRSFRNEAQVL-- 422
K IG G++G+V++A+ +G A+K L + E+A ++ R+ VL
Sbjct: 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 423 -------------SQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
+ RGSL+R+LH +LD +R+++ +A + YLH+ +P
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPP 159
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
+VHR++ S N+L++ K V DFG +RL + + AG+ ++APE+ EK
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEK 219
Query: 530 YDVYSFGVVTLEVLMGKHP 548
DVYSFGV+ E+ + P
Sbjct: 220 SDVYSFGVILWELATLQQP 238
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 98/195 (50%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 435 -HNDAEAVEL--DWAKRVNIVKAM------------------AHALAYLHHDCSPSVVHR 473
+DA V L ++A R + K + A+AL+Y H S V+HR
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 137
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS +T L G+ Y+ PE+ + EK D++
Sbjct: 138 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 195
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 196 SLGVLCYEFLVGKPP 210
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS +T L G+ Y+ PE+ + EK D++
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 190
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 191 SLGVLCYEFLVGKPP 205
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 158
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS +T L G+ Y+ PE+ + EK D++
Sbjct: 159 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 216
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 217 SLGVLCYEFLVGKPP 231
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 135
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS +T L G+ Y+ PE+ + EK D++
Sbjct: 136 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 193
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 194 SLGVLCYEFLVGKPP 208
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS +T L G+ Y+ PE+ + EK D++
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLW 190
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 191 SLGVLCYEFLVGKPP 205
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 137
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS +T L G+ Y+ PE+ + EK D++
Sbjct: 138 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 195
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 196 SLGVLCYEFLVGKPP 210
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 149
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS +T L G+ Y+ PE+ + EK D++
Sbjct: 150 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 207
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 208 SLGVLCYEFLVGKPP 222
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 131
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS +T L G+ Y+ PE+ + EK D++
Sbjct: 132 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 189
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 190 SLGVLCYEFLVGKPP 204
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 135
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS +T L G+ Y+ PE+ + EK D++
Sbjct: 136 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 193
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 194 SLGVLCYEFLVGKPP 208
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS +T L G+ Y+ PE+ + EK D++
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLW 190
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 191 SLGVLCYEFLVGKPP 205
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 136
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS +T L G+ Y+ PE+ + EK D++
Sbjct: 137 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 194
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 195 SLGVLCYEFLVGKPP 209
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 133
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + HA SS +T L+G+ Y+ PE+ + EK D++
Sbjct: 134 DIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLW 191
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 192 SLGVLCYEFLVGKPP 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS +T L G+ Y+ PE+ + EK D++
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLW 190
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 191 SLGVLCYEFLVGKPP 205
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 28/200 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 435 -HNDAEAVEL--------------------DWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V L D + + +A+AL+Y H S V+HR
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH---SKRVIHR 136
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS +T L G+ Y+ PE+ + EK D++
Sbjct: 137 DIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 194
Query: 534 SFGVVTLEVLMGKHPRDLHS 553
S GV+ E L+G P + H+
Sbjct: 195 SLGVLCYEFLVGMPPFEAHT 214
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 133
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS +T L G+ Y+ PE+ + EK D++
Sbjct: 134 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLW 191
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 192 SLGVLCYEFLVGKPP 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 137
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS +T L G+ Y+ PE+ + EK D++
Sbjct: 138 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLW 195
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 196 SLGVLCYEFLVGKPP 210
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 129
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS +T L G+ Y+ PE+ + EK D++
Sbjct: 130 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 187
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 188 SLGVLCYEFLVGKPP 202
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRI-- 433
+G G +G+VY A+ N + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 434 -LHNDAEAV-------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
H+ + D + + +A+AL+Y H S V+HR
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKKVIHR 132
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS + L G+ Y+ PE+ + EK D++
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLW 190
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 191 SLGVLCYEFLVGKPP 205
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS +T L G+ Y+ PE+ + EK D++
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLW 190
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 191 SLGVLCYEFLVGKPP 205
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 435 -HNDAEAVEL--DWAKRVNIVKAM------------------AHALAYLHHDCSPSVVHR 473
+DA V L ++A R + K + A+AL+Y H S V+HR
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 137
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS + L G+ Y+ PE+ + EK D++
Sbjct: 138 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLW 195
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 196 SLGVLCYEFLVGKPP 210
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 134
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS + L G+ Y+ PE+ + EK D++
Sbjct: 135 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLW 192
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 193 SLGVLCYEFLVGKPP 207
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 93/195 (47%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 137
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS +T L G+ Y+ PE EK D++
Sbjct: 138 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLW 195
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 196 SLGVLCYEFLVGKPP 210
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 134
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +A+FG + +HA SS +T L G+ Y+ PE+ + EK D++
Sbjct: 135 DIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 192
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 193 SLGVLCYEFLVGKPP 207
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 133
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS + L G+ Y+ PE+ + EK D++
Sbjct: 134 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLW 191
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 192 SLGVLCYEFLVGKPP 206
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 135
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +A+FG + +HA SS +T L G+ Y+ PE+ + EK D++
Sbjct: 136 DIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 193
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 194 SLGVLCYEFLVGKPP 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 135
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS + L G+ Y+ PE+ + EK D++
Sbjct: 136 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLW 193
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 194 SLGVLCYEFLVGKPP 208
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS + L G+ Y+ PE+ + EK D++
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLW 190
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 191 SLGVLCYEFLVGKPP 205
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 135
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS + L G+ Y+ PE+ + EK D++
Sbjct: 136 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLW 193
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 194 SLGVLCYEFLVGKPP 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS + L G+ Y+ PE+ + EK D++
Sbjct: 133 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLW 190
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 191 SLGVLCYEFLVGKPP 205
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 28/200 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 435 -HNDAEAVEL--------------------DWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V L D + + +A+AL+Y H S V+HR
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH---SKRVIHR 136
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS + L G+ Y+ PE+ + EK D++
Sbjct: 137 DIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLW 194
Query: 534 SFGVVTLEVLMGKHPRDLHS 553
S GV+ E L+G P + H+
Sbjct: 195 SLGVLCYEFLVGMPPFEAHT 214
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 158
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS + L G+ Y+ PE+ + EK D++
Sbjct: 159 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLW 216
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 217 SLGVLCYEFLVGKPP 231
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 28/195 (14%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G +G+VY A+ + + ALK L + E+ R E ++ S + ++ R+
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 435 -HNDAEAV--------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+DA V + D + + +A+AL+Y H S V+HR
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 135
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI N+LL S E +ADFG + +HA SS + L G+ Y+ PE+ + EK D++
Sbjct: 136 DIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLW 193
Query: 534 SFGVVTLEVLMGKHP 548
S GV+ E L+GK P
Sbjct: 194 SLGVLCYEFLVGKPP 208
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 43/219 (19%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSP---ETEELAFIRSFRNEAQVLSQMERGSLFRI 433
+G G +G VYK + N V A+KKL + TEEL + F E +V+++ + +L +
Sbjct: 39 MGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELK--QQFDQEIKVMAKCQHENLVEL 95
Query: 434 LHNDAEAVEL-------------------------DWAKRVNIVKAMAHALAYLHHDCSP 468
L ++ +L W R I + A+ + +LH +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 469 SVVHRDISSNNILLNSKLEAFVADFGTARLLH--ADSSNQTLLAGSYGYIAPELAYTMVM 526
+HRDI S NILL+ A ++DFG AR A + + + G+ Y+APE A +
Sbjct: 155 --IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEI 211
Query: 527 TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIML 565
T K D+YSFGVV LE++ G D H +P+++L
Sbjct: 212 TPKSDIYSFGVVLLEIITGLPAVDEHR------EPQLLL 244
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 106/221 (47%), Gaps = 47/221 (21%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSP---ETEELAFIRSFRNEAQVLSQMERGSLFRI 433
+G G +G VYK + N V A+KKL + TEEL + F E +V+++ + +L +
Sbjct: 39 MGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELK--QQFDQEIKVMAKCQHENLVEL 95
Query: 434 LHNDAEAVEL-------------------------DWAKRVNIVKAMAHALAYLHHDCSP 468
L ++ +L W R I + A+ + +LH +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 469 SVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL----AGSYGYIAPELAYTM 524
+HRDI S NILL+ A ++DFG AR ++ QT++ G+ Y+APE A
Sbjct: 155 --IHRDIKSANILLDEAFTAKISDFGLARA--SEKFAQTVMXXRIVGTTAYMAPE-ALRG 209
Query: 525 VMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIML 565
+T K D+YSFGVV LE++ G D H +P+++L
Sbjct: 210 EITPKSDIYSFGVVLLEIITGLPAVDEHR------EPQLLL 244
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 43/219 (19%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSP---ETEELAFIRSFRNEAQVLSQMERGSLFRI 433
+G G +G VYK + N V A+KKL + TEEL + F E +V+++ + +L +
Sbjct: 33 MGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELK--QQFDQEIKVMAKCQHENLVEL 89
Query: 434 LHNDAEAVEL-------------------------DWAKRVNIVKAMAHALAYLHHDCSP 468
L ++ +L W R I + A+ + +LH +
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 148
Query: 469 SVVHRDISSNNILLNSKLEAFVADFGTARLLH--ADSSNQTLLAGSYGYIAPELAYTMVM 526
+HRDI S NILL+ A ++DFG AR A + G+ Y+APE A +
Sbjct: 149 --IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEI 205
Query: 527 TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIML 565
T K D+YSFGVV LE++ G D H +P+++L
Sbjct: 206 TPKSDIYSFGVVLLEIITGLPAVDEHR------EPQLLL 238
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 40/288 (13%)
Query: 81 SWTMDYDSDHCEWIGITCNSAGSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYY 140
SW D + W+G+ C++ D + R+++L+ L L + Y
Sbjct: 26 SWLPTTDCCNRTWLGVLCDT-----------DTQTY--RVNNLD------LSGLNLPKPY 66
Query: 141 DGFTGSIPSEISALSKLQLLDLSS-NRLRG-------RLTNLNYMSLSRNMLGGLLPQEI 192
IPS ++ L L L + N L G +LT L+Y+ ++ + G +P +
Sbjct: 67 -----PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFL 121
Query: 193 GNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSG-LPQEIGNLKNLML-LDV 250
+K L+ LD N+L G +P ++S L +L + N++SG +P G+ L + +
Sbjct: 122 SQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTI 181
Query: 251 GNNDIIGPIPSTLGLFSDLSYLDLSCNQF--NSSIPNELTRLTQLFHLDLSSNKLSGKIP 308
N + G IP T +L+++DLS N ++S+ + TQ H L+ N L+ +
Sbjct: 182 SRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIH--LAKNSLAFDL- 237
Query: 309 SQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVP 356
++ ++L LDL NN I G++P +T+L L LN+S N L G +P
Sbjct: 238 GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Query: 258 PIPSTLGLFSDLSYLDLS-CNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMED 316
PIPS+L L++L + N IP + +LTQL +L ++ +SG IP ++ ++
Sbjct: 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 317 LTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYSNKHLSSMPTPRKIDSKYC 376
L LD S N + G++P I+ L L + GN++SG +P S S + T I
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 377 IG 378
G
Sbjct: 187 TG 188
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 38/170 (22%)
Query: 126 SCFPNLESLRILAYYDG--FTGSIPSEISALSKL-QLLDLSSNRLRGRLT------NLNY 176
S PNL + +DG +G+IP + SKL + +S NRL G++ NL +
Sbjct: 146 SSLPNLVGIT----FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAF 201
Query: 177 MSLSRNMLGG--------------------LLPQEIGNL---KNLIELDVGDNSLIGPIP 213
+ LSRNML G L ++G + KNL LD+ +N + G +P
Sbjct: 202 VDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLP 261
Query: 214 LTLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDII--GPIPS 261
L++L L L ++ N L G + GNL+ + NN + P+P+
Sbjct: 262 QGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLPA 311
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 100/218 (45%), Gaps = 43/218 (19%)
Query: 378 GTGAYGSVYKAQLPNGRVFALKKLNSP---ETEELAFIRSFRNEAQVLSQMERGSLFRIL 434
G G +G VYK + N V A+KKL + TEEL + F E +V ++ + +L +L
Sbjct: 31 GEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELK--QQFDQEIKVXAKCQHENLVELL 87
Query: 435 HNDAEAVEL-------------------------DWAKRVNIVKAMAHALAYLHHDCSPS 469
++ +L W R I + A+ + +LH +
Sbjct: 88 GFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH-- 145
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLH--ADSSNQTLLAGSYGYIAPELAYTMVMT 527
+HRDI S NILL+ A ++DFG AR A + + G+ Y APE A +T
Sbjct: 146 -IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEIT 203
Query: 528 EKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIML 565
K D+YSFGVV LE++ G D H +P+++L
Sbjct: 204 PKSDIYSFGVVLLEIITGLPAVDEHR------EPQLLL 235
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 43/204 (21%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM----------- 425
IG+G++G+VYK + + + +P ++L ++F+NE VL +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 77
Query: 426 -------------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVH 472
E SL+ LH E+ K ++I + A + YLH + S++H
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSIIH 132
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGYIAPELAYTMVMTEK- 529
RD+ SNNI L+ L + DFG A + S + L+GS ++APE+ + M +K
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 189
Query: 530 -----YDVYSFGVVTLEVLMGKHP 548
DVY+FG+V E++ G+ P
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 43/204 (21%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM----------- 425
IG+G++G+VYK + + + +P ++L ++F+NE VL +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 72
Query: 426 -------------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVH 472
E SL+ LH E+ K ++I + A + YLH + S++H
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSIIH 127
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGYIAPELAYTMVMTEK- 529
RD+ SNNI L+ L + DFG A + S + L+GS ++APE+ + M +K
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 184
Query: 530 -----YDVYSFGVVTLEVLMGKHP 548
DVY+FG+V E++ G+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 43/204 (21%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM----------- 425
IG+G++G+VYK + + + +P ++L ++F+NE VL +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 77
Query: 426 -------------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVH 472
E SL+ LH E+ K ++I + A + YLH + S++H
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSIIH 132
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGYIAPELAYTMVMTEK- 529
RD+ SNNI L+ L + DFG A + S + L+GS ++APE+ + M +K
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 189
Query: 530 -----YDVYSFGVVTLEVLMGKHP 548
DVY+FG+V E++ G+ P
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 108/244 (44%), Gaps = 62/244 (25%)
Query: 377 IGTGAYGSVYKA--QLPNGR--VFALKKLNSPETEELAFIRSFRNEAQVLSQ-------- 424
IG G +G V +LP R A+K L S TE+ R F +EA ++ Q
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR--RDFLSEASIMGQFDHPNVIH 98
Query: 425 -----------------MERGSLFRIL-HNDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
ME GSL L ND + + + V +++ +A + YL
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL---A 152
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYI-----APELA 521
+ VHRD+++ NIL+NS L V+DFG +R L D+S+ T + G I APE
Sbjct: 153 DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 212
Query: 522 YTMVMTEKYDVYSFGVVTLEVL-MGKHP------RDLHSTLSSSYDPKIMLIDVLDQRLP 574
T DV+S+G+V EV+ G+ P +D+ + + Y RLP
Sbjct: 213 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDY------------RLP 260
Query: 575 PPVD 578
PP+D
Sbjct: 261 PPMD 264
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 43/204 (21%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM----------- 425
IG+G++G+VYK + + + +P ++L ++F+NE VL +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 72
Query: 426 -------------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVH 472
E SL+ LH E+ K ++I + A + YLH + S++H
Sbjct: 73 STAPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSIIH 127
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGYIAPELAYTMVMTEK- 529
RD+ SNNI L+ L + DFG A + S + L+GS ++APE+ + M +K
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 184
Query: 530 -----YDVYSFGVVTLEVLMGKHP 548
DVY+FG+V E++ G+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 43/204 (21%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM----------- 425
IG+G++G+VYK + + + +P ++L ++F+NE VL +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 74
Query: 426 -------------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVH 472
E SL+ LH E+ K ++I + A + YLH + S++H
Sbjct: 75 STKPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSIIH 129
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGYIAPELAYTMVMTEK- 529
RD+ SNNI L+ L + DFG A + S + L+GS ++APE+ + M +K
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 186
Query: 530 -----YDVYSFGVVTLEVLMGKHP 548
DVY+FG+V E++ G+ P
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 117/256 (45%), Gaps = 55/256 (21%)
Query: 364 SMPTPRKIDSKYC-----IGTGAYGSVYKAQL--PNGR--VFALKKLNSPETEELAFIRS 414
SM ++ID Y IG G +G V + +L P + A+K L TE R
Sbjct: 4 SMEFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR--RE 61
Query: 415 FRNEAQVLSQMERGSLFR------------ILHNDAEAVELDWAKRVN-----------I 451
F +EA ++ Q E ++ R IL E LD R+N +
Sbjct: 62 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGM 121
Query: 452 VKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAG 511
++ +A + YL S VHRD+++ NIL+NS L V+DFG +R L +SS+ T +
Sbjct: 122 LRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSS 178
Query: 512 SYGYI-----APELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPR-DLHSTLSSSYDPKIM 564
G I APE T D +S+G+V EV+ G+ P D+ S+ D
Sbjct: 179 LGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM-----SNQD---- 229
Query: 565 LIDVLDQ--RLPPPVD 578
+I+ ++Q RLPPP D
Sbjct: 230 VINAIEQDYRLPPPPD 245
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 43/204 (21%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM----------- 425
IG+G++G+VYK + + + +P ++L ++F+NE VL +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 100
Query: 426 -------------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVH 472
E SL+ LH E+ K ++I + A + YLH + S++H
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSIIH 155
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGYIAPELAYTMVMTEK- 529
RD+ SNNI L+ L + DFG A + S + L+GS ++APE+ + M +K
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 212
Query: 530 -----YDVYSFGVVTLEVLMGKHP 548
DVY+FG+V E++ G+ P
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 43/204 (21%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM----------- 425
IG+G++G+VYK + + + +P ++L ++F+NE VL +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 99
Query: 426 -------------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVH 472
E SL+ LH E+ K ++I + A + YLH + S++H
Sbjct: 100 STKPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSIIH 154
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGYIAPELAYTMVMTEK- 529
RD+ SNNI L+ L + DFG A + S + L+GS ++APE+ + M +K
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 211
Query: 530 -----YDVYSFGVVTLEVLMGKHP 548
DVY+FG+V E++ G+ P
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 43/204 (21%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM----------- 425
IG+G++G+VYK + + + +P ++L ++F+NE VL +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 72
Query: 426 -------------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVH 472
E SL+ LH E+ K ++I + A + YLH + S++H
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSIIH 127
Query: 473 RDISSNNILLNSKLEAFVADFG--TARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK- 529
RD+ SNNI L+ L + DFG T + + S L+GS ++APE+ + M +K
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 184
Query: 530 -----YDVYSFGVVTLEVLMGKHP 548
DVY+FG+V E++ G+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 43/204 (21%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM----------- 425
IG+G++G+VYK + + + +P ++L ++F+NE VL +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 92
Query: 426 -------------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVH 472
E SL+ LH E+ K ++I + A + YLH + S++H
Sbjct: 93 STKPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSIIH 147
Query: 473 RDISSNNILLNSKLEAFVADFG--TARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK- 529
RD+ SNNI L+ L + DFG T + + S L+GS ++APE+ + M +K
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 204
Query: 530 -----YDVYSFGVVTLEVLMGKHP 548
DVY+FG+V E++ G+ P
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 43/204 (21%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM----------- 425
IG+G++G+VYK + + + +P ++L ++F+NE VL +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 100
Query: 426 -------------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVH 472
E SL+ LH E+ K ++I + A + YLH + S++H
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSIIH 155
Query: 473 RDISSNNILLNSKLEAFVADFG--TARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK- 529
RD+ SNNI L+ L + DFG T + + S L+GS ++APE+ + M +K
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 212
Query: 530 -----YDVYSFGVVTLEVLMGKHP 548
DVY+FG+V E++ G+ P
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 39/202 (19%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM----------- 425
IG+G++G+VYK + + + +P ++L ++F+NE VL +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 76
Query: 426 -------------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVH 472
E SL+ LH A + + K ++I + A + YLH + S++H
Sbjct: 77 STKPQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLH---AKSIIH 131
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGYIAPELAYTMVMTEKY 530
RD+ SNNI L+ + DFG A + S + L+GS ++APE+ M + Y
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI-RMQDSNPY 190
Query: 531 ----DVYSFGVVTLEVLMGKHP 548
DVY+FG+V E++ G+ P
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLP 212
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 37/201 (18%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM----------- 425
IG+G++G+VYK + + K+ P E+ ++FRNE VL +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQF---QAFRNEVAVLRKTRHVNILLFMGY 100
Query: 426 -------------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVH 472
E SL++ LH + + + ++I + A + YLH + +++H
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHLH--VQETKFQMFQLIDIARQTAQGMDYLH---AKNIIH 155
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL--AGSYGYIAPELAYTM---VMT 527
RD+ SNNI L+ L + DFG A + S +Q + GS ++APE+ +
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
+ DVYS+G+V E++ G+ P
Sbjct: 216 FQSDVYSYGIVLYELMTGELP 236
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 39/202 (19%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM----------- 425
IG+G++G+VYK + + + +P ++L ++F+NE VL +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 88
Query: 426 -------------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVH 472
E SL+ LH A + + K ++I + A + YLH + S++H
Sbjct: 89 STKPQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLH---AKSIIH 143
Query: 473 RDISSNNILLNSKLEAFVADFG--TARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKY 530
RD+ SNNI L+ + DFG T + + S L+GS ++APE+ M + Y
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI-RMQDSNPY 202
Query: 531 ----DVYSFGVVTLEVLMGKHP 548
DVY+FG+V E++ G+ P
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLP 224
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 39/202 (19%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM----------- 425
IG+G++G+VYK + + + +P ++L ++F+NE VL +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 88
Query: 426 -------------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVH 472
E SL+ LH A + + K ++I + A + YLH + S++H
Sbjct: 89 STAPQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLH---AKSIIH 143
Query: 473 RDISSNNILLNSKLEAFVADFG--TARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKY 530
RD+ SNNI L+ + DFG T + + S L+GS ++APE+ M + Y
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI-RMQDSNPY 202
Query: 531 ----DVYSFGVVTLEVLMGKHP 548
DVY+FG+V E++ G+ P
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLP 224
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 25/202 (12%)
Query: 369 RKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQV------- 421
++I+ + +G GA+G V KA+ + A+K++ S E+E AFI R ++V
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIES-ESERKAFIVELRQLSRVNHPNIVK 66
Query: 422 ------------LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
+ E GSL+ +LH A ++ + +AYLH +
Sbjct: 67 LYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 470 VVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTE 528
++HRD+ N+LL + + DFGTA + +N GS ++APE+ +E
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---GSAAWMAPEVFEGSNYSE 183
Query: 529 KYDVYSFGVVTLEVLMGKHPRD 550
K DV+S+G++ EV+ + P D
Sbjct: 184 KCDVFSWGIILWEVITRRKPFD 205
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 25/202 (12%)
Query: 369 RKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQV------- 421
++I+ + +G GA+G V KA+ + A+K++ S E+E AFI R ++V
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIES-ESERKAFIVELRQLSRVNHPNIVK 65
Query: 422 ------------LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
+ E GSL+ +LH A ++ + +AYLH +
Sbjct: 66 LYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 470 VVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTE 528
++HRD+ N+LL + + DFGTA + +N GS ++APE+ +E
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---GSAAWMAPEVFEGSNYSE 182
Query: 529 KYDVYSFGVVTLEVLMGKHPRD 550
K DV+S+G++ EV+ + P D
Sbjct: 183 KCDVFSWGIILWEVITRRKPFD 204
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 41/227 (18%)
Query: 363 SSMPT--PRKIDSKYCIGTGAYGSVYKAQLPNGR-VFALKKL----NSPETEELAFIRSF 415
S +PT +I+ + IG G +G V+K +L + V A+K L + ETE + + F
Sbjct: 11 SRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEF 70
Query: 416 RNEAQVLSQMERGS---LFRILHNDAEAV------------------ELDWAKRVNIVKA 454
+ E ++S + + L+ ++HN V + W+ ++ ++
Sbjct: 71 QREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLD 130
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILL-----NSKLEAFVADFGTARL-LHADSSNQTL 508
+A + Y+ + +P +VHRD+ S NI L N+ + A VADFGT++ +H+ S
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSG---- 185
Query: 509 LAGSYGYIAPEL--AYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHS 553
L G++ ++APE A TEK D YSF ++ +L G+ P D +S
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 115/251 (45%), Gaps = 55/251 (21%)
Query: 369 RKIDSKYC-----IGTGAYGSVYKAQL--PNGR--VFALKKLNSPETEELAFIRSFRNEA 419
++ID Y IG G +G V + +L P + A+K L TE R F +EA
Sbjct: 11 KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR--REFLSEA 68
Query: 420 QVLSQMERGSLFR------------ILHNDAEAVELDWAKRVN-----------IVKAMA 456
++ Q E ++ R IL E LD R+N +++ +A
Sbjct: 69 SIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIA 128
Query: 457 HALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYI 516
+ YL S VHRD+++ NIL+NS L V+DFG +R L +SS+ T + G I
Sbjct: 129 SGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKI 185
Query: 517 -----APELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPR-DLHSTLSSSYDPKIMLIDVL 569
APE T D +S+G+V EV+ G+ P D+ S+ D +I+ +
Sbjct: 186 PIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM-----SNQD----VINAI 236
Query: 570 DQ--RLPPPVD 578
+Q RLPPP D
Sbjct: 237 EQDYRLPPPPD 247
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 44/205 (21%)
Query: 377 IGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFR--- 432
+G G +G K G V +K+L + E R+F E +V+ +E ++ +
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ---RTFLKEVKVMRCLEHPNVLKFIG 74
Query: 433 ILHNDAE--------------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSVVH 472
+L+ D + W++RV+ K +A +AYLH S +++H
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIH 131
Query: 473 RDISSNNILLNSKLEAFVADFGTARLL--------------HADSSNQTLLAGSYGYIAP 518
RD++S+N L+ VADFG ARL+ D + + G+ ++AP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL 543
E+ EK DV+SFG+V E++
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 107/244 (43%), Gaps = 62/244 (25%)
Query: 377 IGTGAYGSVYKA--QLPNGR--VFALKKLNSPETEELAFIRSFRNEAQVLSQ-------- 424
IG G +G V +LP R A+K L S TE+ R F +EA ++ Q
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR--RDFLSEASIMGQFDHPNVIH 72
Query: 425 -----------------MERGSLFRIL-HNDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
ME GSL L ND + + + V +++ +A + YL
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL---A 126
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYI-----APELA 521
+ VHR +++ NIL+NS L V+DFG +R L D+S+ T + G I APE
Sbjct: 127 DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 522 YTMVMTEKYDVYSFGVVTLEVL-MGKHP------RDLHSTLSSSYDPKIMLIDVLDQRLP 574
T DV+S+G+V EV+ G+ P +D+ + + Y RLP
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDY------------RLP 234
Query: 575 PPVD 578
PP+D
Sbjct: 235 PPMD 238
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 102/247 (41%), Gaps = 43/247 (17%)
Query: 359 NKHLSSMPTPR----KIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIR 413
N L+ MP + D +G G +G+VY A + N + ALK L + E+
Sbjct: 1 NTALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH 60
Query: 414 SFRNEAQVLSQME-------------------------RGSLFRILHNDAEAVELDWAKR 448
R E ++ S + RG L++ L D +
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRS 117
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
++ +A AL Y H V+HRDI N+L+ K E +ADFG + +HA S +
Sbjct: 118 ATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRX 172
Query: 509 LAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDV 568
+ G+ Y+ PE+ EK D++ GV+ E L+G P D S S+ I
Sbjct: 173 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD-----SPSHTETHRRIVN 227
Query: 569 LDQRLPP 575
+D + PP
Sbjct: 228 VDLKFPP 234
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 39/225 (17%)
Query: 377 IGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME--------- 426
+G G +G+VY A + N + ALK L + E+ R E ++ S +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 427 ----------------RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSV 470
RG L++ L D + ++ +A AL Y H V
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADALHYCHER---KV 135
Query: 471 VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKY 530
+HRDI N+L+ K E +ADFG + +HA S + + G+ Y+ PE+ EK
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKV 193
Query: 531 DVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPP 575
D++ GV+ E L+G P D S S+ I +D + PP
Sbjct: 194 DLWCAGVLCYEFLVGMPPFD-----SPSHTETHRRIVNVDLKFPP 233
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 31/212 (14%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRI--- 433
IG G +G VY+A V + P+ + I + R EA++ + ++ ++ +
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGV 74
Query: 434 -LHNDAEAVELDWAKR-----------------VNIVKAMAHALAYLHHDCSPSVVHRDI 475
L + +++A+ VN +A + YLH + ++HRD+
Sbjct: 75 CLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDL 134
Query: 476 SSNNILLNSKLE--------AFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMT 527
S+NIL+ K+E + DFG AR H + + AG+Y ++APE+ + +
Sbjct: 135 KSSNILILQKVENGDLSNKILKITDFGLAREWH--RTTKMSAAGAYAWMAPEVIRASMFS 192
Query: 528 EKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
+ DV+S+GV+ E+L G+ P L+ +Y
Sbjct: 193 KGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY 224
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 39/225 (17%)
Query: 377 IGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME--------- 426
+G G +G+VY A + N + ALK L + E+ R E ++ S +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 427 ----------------RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSV 470
RG L++ L D + ++ +A AL Y H V
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADALHYCHER---KV 135
Query: 471 VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKY 530
+HRDI N+L+ K E +ADFG + +HA S + + G+ Y+ PE+ EK
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKV 193
Query: 531 DVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPP 575
D++ GV+ E L+G P D S S+ I +D + PP
Sbjct: 194 DLWCAGVLCYEFLVGMPPFD-----SPSHTETHRRIVNVDLKFPP 233
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 112/227 (49%), Gaps = 41/227 (18%)
Query: 363 SSMPT--PRKIDSKYCIGTGAYGSVYKAQLPNGR-VFALKKL----NSPETEELAFIRSF 415
S +PT +I+ + IG G +G V+K +L + V A+K L + ETE + + F
Sbjct: 11 SRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEF 70
Query: 416 RNEAQVLSQMERGS---LFRILHNDAEAV------------------ELDWAKRVNIVKA 454
+ E ++S + + L+ ++HN V + W+ ++ ++
Sbjct: 71 QREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLD 130
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILL-----NSKLEAFVADFG-TARLLHADSSNQTL 508
+A + Y+ + +P +VHRD+ S NI L N+ + A VADFG + + +H+ S
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSG---- 185
Query: 509 LAGSYGYIAPEL--AYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHS 553
L G++ ++APE A TEK D YSF ++ +L G+ P D +S
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 31/213 (14%)
Query: 360 KHLSSMPTPRKIDSKY-CIGTGAYGSVYKA-QLPNGRVFALKKLN---SPETE----ELA 410
+ + S+ P+K +++ IG GA G+VY A + G+ A++++N P+ E E+
Sbjct: 10 RSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL 69
Query: 411 FIRSFRNEA---------------QVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAM 455
+R +N V+ + GSL ++ +D + + +
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCREC 125
Query: 456 AHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGY 515
AL +LH S V+HRDI S+NILL + DFG + + S ++ + G+ +
Sbjct: 126 LQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW 182
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
+APE+ K D++S G++ +E++ G+ P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 31/213 (14%)
Query: 360 KHLSSMPTPRKIDSKY-CIGTGAYGSVYKA-QLPNGRVFALKKLN---SPETE----ELA 410
+ + S+ P+K +++ IG GA G+VY A + G+ A++++N P+ E E+
Sbjct: 10 RSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL 69
Query: 411 FIRSFRNEA---------------QVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAM 455
+R +N V+ + GSL ++ +D + + +
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCREC 125
Query: 456 AHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGY 515
AL +LH S V+HRDI S+NILL + DFG + + S ++ + G+ +
Sbjct: 126 LQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYW 182
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
+APE+ K D++S G++ +E++ G+ P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 31/213 (14%)
Query: 360 KHLSSMPTPRKIDSKY-CIGTGAYGSVYKA-QLPNGRVFALKKLN---SPETE----ELA 410
+ + S+ P+K +++ IG GA G+VY A + G+ A++++N P+ E E+
Sbjct: 11 RSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL 70
Query: 411 FIRSFRNEA---------------QVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAM 455
+R +N V+ + GSL ++ +D + + +
Sbjct: 71 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCREC 126
Query: 456 AHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGY 515
AL +LH S V+HRDI S+NILL + DFG + + S ++ + G+ +
Sbjct: 127 LQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYW 183
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
+APE+ K D++S G++ +E++ G+ P
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 31/213 (14%)
Query: 360 KHLSSMPTPRKIDSKY-CIGTGAYGSVYKA-QLPNGRVFALKKLN---SPETE----ELA 410
+ + S+ P+K +++ IG GA G+VY A + G+ A++++N P+ E E+
Sbjct: 10 RSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL 69
Query: 411 FIRSFRNEA---------------QVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAM 455
+R +N V+ + GSL ++ +D + + +
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCREC 125
Query: 456 AHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGY 515
AL +LH S V+HRDI S+NILL + DFG + + S ++ + G+ +
Sbjct: 126 LQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYW 182
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
+APE+ K D++S G++ +E++ G+ P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 111/227 (48%), Gaps = 41/227 (18%)
Query: 363 SSMPT--PRKIDSKYCIGTGAYGSVYKAQLPNGR-VFALKKL----NSPETEELAFIRSF 415
S +PT +I+ + IG G +G V+K +L + V A+K L + ETE + + F
Sbjct: 11 SRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEF 70
Query: 416 RNEAQVLSQMERGS---LFRILHNDAEAV------------------ELDWAKRVNIVKA 454
+ E ++S + + L+ ++HN V + W+ ++ ++
Sbjct: 71 QREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLD 130
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILL-----NSKLEAFVADFG-TARLLHADSSNQTL 508
+A + Y+ + +P +VHRD+ S NI L N+ + A VADF + + +H+ S
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSG---- 185
Query: 509 LAGSYGYIAPEL--AYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHS 553
L G++ ++APE A TEK D YSF ++ +L G+ P D +S
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 60/242 (24%)
Query: 377 IGTGAYGSVYKAQL--PNGR--VFALKKLNSPETEELAFIRSFRNEAQVLSQ-------- 424
IG G +G V +L P R A+K L + T++ R F +EA ++ Q
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR--RDFLSEASIMGQFDHPNIIH 94
Query: 425 -----------------MERGSLFRILH-NDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
ME GSL L ND + + V +++ + + YL
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLS--- 148
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYT 523
S VHRD+++ NIL+NS L V+DFG +R+L D G + APE
Sbjct: 149 DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 208
Query: 524 MVMTEKYDVYSFGVVTLEVL-MGKHP------RDLHSTLSSSYDPKIMLIDVLDQRLPPP 576
T DV+S+G+V EV+ G+ P +D+ + Y RLPPP
Sbjct: 209 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY------------RLPPP 256
Query: 577 VD 578
+D
Sbjct: 257 MD 258
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 60/242 (24%)
Query: 377 IGTGAYGSVYKAQL--PNGR--VFALKKLNSPETEELAFIRSFRNEAQVLSQ-------- 424
IG G +G V +L P R A+K L + T++ R F +EA ++ Q
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR--RDFLSEASIMGQFDHPNIIH 73
Query: 425 -----------------MERGSLFRILH-NDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
ME GSL L ND + + V +++ + + YL
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLS--- 127
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYT 523
S VHRD+++ NIL+NS L V+DFG +R+L D G + APE
Sbjct: 128 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 187
Query: 524 MVMTEKYDVYSFGVVTLEVL-MGKHP------RDLHSTLSSSYDPKIMLIDVLDQRLPPP 576
T DV+S+G+V EV+ G+ P +D+ + Y RLPPP
Sbjct: 188 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY------------RLPPP 235
Query: 577 VD 578
+D
Sbjct: 236 MD 237
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 60/242 (24%)
Query: 377 IGTGAYGSVYKAQL--PNGR--VFALKKLNSPETEELAFIRSFRNEAQVLSQ-------- 424
IG G +G V +L P R A+K L + T++ R F +EA ++ Q
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR--RDFLSEASIMGQFDHPNIIH 79
Query: 425 -----------------MERGSLFRILH-NDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
ME GSL L ND + + V +++ + + YL
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLS--- 133
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYT 523
S VHRD+++ NIL+NS L V+DFG +R+L D G + APE
Sbjct: 134 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 193
Query: 524 MVMTEKYDVYSFGVVTLEVL-MGKHP------RDLHSTLSSSYDPKIMLIDVLDQRLPPP 576
T DV+S+G+V EV+ G+ P +D+ + Y RLPPP
Sbjct: 194 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY------------RLPPP 241
Query: 577 VD 578
+D
Sbjct: 242 MD 243
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 128/300 (42%), Gaps = 72/300 (24%)
Query: 357 YSNKHLSSMPTPRKIDSKYCI--------------------GTGAYGSVYKAQ-LPNGRV 395
+ SS P PR +DSK CI G GAYG V K + +P+G++
Sbjct: 20 FEQPQTSSTP-PRDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQI 78
Query: 396 FALKKL----NSPETEEL-----------------AFIRSFRNEAQVLSQMER-----GS 429
A+K++ NS E + L F + E V ME
Sbjct: 79 MAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDK 138
Query: 430 LFRILHNDAEAVELDWAKR--VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLE 487
++ + + + + D + V+IVKA+ H + L SV+HRD+ +N+L+N+ +
Sbjct: 139 FYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL------SVIHRDVKPSNVLINALGQ 192
Query: 488 AFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKY----DVYSFGVVTLEVL 543
+ DFG + L DS +T+ AG Y+APE + + Y D++S G+ +E+
Sbjct: 193 VKMCDFGISGYL-VDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA 251
Query: 544 MGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPP-PVDRKVIQDILLVSTISFACLQSNPKS 602
+ + P D T P L V+++ P P D+ + + S CL+ N K
Sbjct: 252 ILRFPYDSWGT------PFQQLKQVVEEPSPQLPADKFSAEFVDFTSQ----CLKKNSKE 301
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 41/202 (20%)
Query: 380 GAYGSVYKAQLPNG----RVFALKKLNSPETEELAFIR---SFRNEAQVLSQMERGS--- 429
G +G V+KAQL N ++F L+ S ++E F N Q ++ +RGS
Sbjct: 26 GRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLE 85
Query: 430 ----LFRILHNDAEAVE------LDWAKRVNIVKAMAHALAYLHHDC--------SPSVV 471
L H+ + + W + ++ + M+ L+YLH D PS+
Sbjct: 86 VELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIA 145
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLH-----ADSSNQTLLAGSYGYIAPELAYTMVM 526
HRD S N+LL S L A +ADFG A D+ Q G+ Y+APE+ +
Sbjct: 146 HRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV---GTRRYMAPEVLEGAIN 202
Query: 527 TE-----KYDVYSFGVVTLEVL 543
+ + D+Y+ G+V E++
Sbjct: 203 FQRDAFLRIDMYAMGLVLWELV 224
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 39/227 (17%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNSPETEELAFIRSFRNEAQVLSQME--------- 426
+G G +G+VY A+ + ALK L + E+ R E ++ + +
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 427 ----------------RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSV 470
RG L++ L ++ D + I++ +A AL Y H V
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQ---KSCTFDEQRTATIMEELADALMYCH---GKKV 144
Query: 471 VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKY 530
+HRDI N+LL K E +ADFG + +HA S + + G+ Y+ PE+ + EK
Sbjct: 145 IHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKV 202
Query: 531 DVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPV 577
D++ GV+ E+L+G P + S+S++ I +D + P V
Sbjct: 203 DLWCIGVLCYELLVGNPPFE-----SASHNETYRRIVKVDLKFPASV 244
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 31/211 (14%)
Query: 362 LSSMPTPRKIDSKY-CIGTGAYGSVYKA-QLPNGRVFALKKLN---SPETE----ELAFI 412
+ S+ P+K +++ IG GA G+VY A + G+ A++++N P+ E E+ +
Sbjct: 13 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 72
Query: 413 RSFRNEA---------------QVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAH 457
R +N V+ + GSL ++ +D + + +
Sbjct: 73 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQ 128
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIA 517
AL +LH S V+HR+I S+NILL + DFG + + S ++ + G+ ++A
Sbjct: 129 ALEFLH---SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMA 185
Query: 518 PELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
PE+ K D++S G++ +E++ G+ P
Sbjct: 186 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 34/197 (17%)
Query: 380 GAYGSVYKAQLPNG----RVFALKKLNSPETE-ELAFIRSFRNE--AQVLSQMERGS--- 429
G +G V+KAQL N ++F ++ S + E E+ + ++E Q + +RG+
Sbjct: 35 GRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVD 94
Query: 430 ----LFRILHNDA------EAVELDWAKRVNIVKAMAHALAYLHHDC-------SPSVVH 472
L H +A + W + +I + MA LAYLH D P++ H
Sbjct: 95 VDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISH 154
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSS--NQTLLAGSYGYIAPELAYTMVMTE-- 528
RDI S N+LL + L A +ADFG A A S + G+ Y+APE+ + +
Sbjct: 155 RDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRD 214
Query: 529 ---KYDVYSFGVVTLEV 542
+ D+Y+ G+V E+
Sbjct: 215 AFLRIDMYAMGLVLWEL 231
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 43/216 (19%)
Query: 368 PRKIDSKYCIGTGAYGSVYKAQLP--NGRV---FALKKLNSPETEELAFIRSFRNEAQVL 422
P + + IG G +G VYK L +G+ A+K L + TE+ F EA ++
Sbjct: 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV--DFLGEAGIM 100
Query: 423 SQ-------------------------MERGSLFRIL-HNDAEAVELDWAKRVNIVKAMA 456
Q ME G+L + L D E L + V +++ +A
Sbjct: 101 GQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL---QLVGMLRGIA 157
Query: 457 HALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---Y 513
+ YL + + VHRD+++ NIL+NS L V+DFG +R+L D +G
Sbjct: 158 AGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPI 214
Query: 514 GYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHP 548
+ APE T DV+SFG+V EV+ G+ P
Sbjct: 215 RWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 52/238 (21%)
Query: 377 IGTGAYGSVY--KAQLPNGRVF--ALKKLNSPETEELAFIRSFRNEAQVLSQ-------- 424
+G G +G V + +LP+ + A+K L TE+ R F EA ++ Q
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIR 110
Query: 425 -----------------MERGSLFRILH-NDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
ME GSL L +DA+ + + V +++ +A + YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL---S 164
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYT 523
VHRD+++ NIL+NS L V+DFG AR+L D G + +PE
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 524 MVMTEKYDVYSFGVVTLEVL-MGKHPRDLHSTLSSSYDPKIMLIDVLDQ--RLPPPVD 578
T DV+S+G+V EV+ G+ P + +S+ +I +D+ RLPPP+D
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQ-----DVIKAVDEGYRLPPPMD 274
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 120/276 (43%), Gaps = 63/276 (22%)
Query: 350 KLSGRVPYSNKHLSSMPT------PRKIDS-----KYCIGTGAYGSVY--KAQLPNGRVF 396
KL G Y + H PT +++D+ +G G +G V + +LP+ +
Sbjct: 15 KLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI 74
Query: 397 --ALKKLNSPETEELAFIRSFRNEAQVLSQ-------------------------MERGS 429
A+K L TE+ R F EA ++ Q ME GS
Sbjct: 75 SVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGS 132
Query: 430 LFRILH-NDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEA 488
L L +DA+ + + V +++ +A + YL VHRD+++ NIL+NS L
Sbjct: 133 LDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVC 186
Query: 489 FVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-M 544
V+DFG +R+L D G + +PE T DV+S+G+V EV+
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 545 GKHPRDLHSTLSSSYDPKIMLIDVLDQ--RLPPPVD 578
G+ P + +S+ +I +D+ RLPPP+D
Sbjct: 247 GERP---YWEMSNQ-----DVIKAVDEGYRLPPPMD 274
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 120/276 (43%), Gaps = 63/276 (22%)
Query: 350 KLSGRVPYSNKHLSSMPT------PRKIDS-----KYCIGTGAYGSVY--KAQLPNGRVF 396
KL G Y + H PT +++D+ +G G +G V + +LP+ +
Sbjct: 15 KLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI 74
Query: 397 --ALKKLNSPETEELAFIRSFRNEAQVLSQ-------------------------MERGS 429
A+K L TE+ R F EA ++ Q ME GS
Sbjct: 75 SVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 430 LFRILH-NDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEA 488
L L +DA+ + + V +++ +A + YL VHRD+++ NIL+NS L
Sbjct: 133 LDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVC 186
Query: 489 FVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-M 544
V+DFG +R+L D G + +PE T DV+S+G+V EV+
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 545 GKHPRDLHSTLSSSYDPKIMLIDVLDQ--RLPPPVD 578
G+ P + +S+ +I +D+ RLPPP+D
Sbjct: 247 GERP---YWEMSNQ-----DVIKAVDEGYRLPPPMD 274
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 109/247 (44%), Gaps = 23/247 (9%)
Query: 341 LDYLNLSGNKLSGRVPYSNKHLSSMPTPRKIDSKYCIGTGAYGSVYKAQLPN-GRVFALK 399
LD N+S +K+ G + + P K + I T G K + G +
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 400 KLNSPETEELAFIRSFRNEAQVLSQ-MERGSLFRILH-NDAEAVELDWAKRVNIVKAMAH 457
+ + P L + + ++++ ME GSL L +DA+ + + V +++ +A
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---QLVGMLRGIAS 129
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YG 514
+ YL VHRD+++ NIL+NS L V+DFG +R+L D G
Sbjct: 130 GMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 186
Query: 515 YIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRDLHSTLSSSYDPKIMLIDVLDQ-- 571
+ +PE T DV+S+G+V EV+ G+ P S +I +D+
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------VIKAVDEGY 238
Query: 572 RLPPPVD 578
RLPPP+D
Sbjct: 239 RLPPPMD 245
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 112/247 (45%), Gaps = 23/247 (9%)
Query: 341 LDYLNLSGNKLSGRVPYSNKHLSSMPTPRKIDSKYCIGTGAYGSVYKAQLPN-GRVFALK 399
LD N+S +K+ G + + P K + I T G K + G +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 400 KLNSPETEELAFIRSFRNEAQVLSQ-MERGSLFRILH-NDAEAVELDWAKRVNIVKAMAH 457
+ + P L + + ++++ ME GSL L +DA+ + + V +++ +A
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---QLVGMLRGIAS 158
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YG 514
+ YL VHRD+++ NIL+NS L V+DFG +R+L D G
Sbjct: 159 GMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 515 YIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRDLHSTLSSSYDPKIMLIDVLDQ-- 571
+ +PE T DV+S+G+V EV+ G+ P + +S+ +I +D+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQ-----DVIKAVDEGY 267
Query: 572 RLPPPVD 578
RLPPP+D
Sbjct: 268 RLPPPMD 274
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 120/276 (43%), Gaps = 63/276 (22%)
Query: 350 KLSGRVPYSNKHLSSMPT------PRKIDS-----KYCIGTGAYGSVY--KAQLPNGRVF 396
KL G Y + H PT +++D+ +G G +G V + +LP+ +
Sbjct: 15 KLPGLRTYVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI 74
Query: 397 --ALKKLNSPETEELAFIRSFRNEAQVLSQ-------------------------MERGS 429
A+K L TE+ R F EA ++ Q ME GS
Sbjct: 75 SVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 430 LFRILH-NDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEA 488
L L +DA+ + + V +++ +A + YL VHRD+++ NIL+NS L
Sbjct: 133 LDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVC 186
Query: 489 FVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-M 544
V+DFG +R+L D G + +PE T DV+S+G+V EV+
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 545 GKHPRDLHSTLSSSYDPKIMLIDVLDQ--RLPPPVD 578
G+ P + +S+ +I +D+ RLPPP+D
Sbjct: 247 GERP---YWEMSNQ-----DVIKAVDEGYRLPPPMD 274
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 120/276 (43%), Gaps = 63/276 (22%)
Query: 350 KLSGRVPYSNKHLSSMPT------PRKIDS-----KYCIGTGAYGSVY--KAQLPNGRVF 396
KL G Y + H PT +++D+ +G G +G V + +LP+ +
Sbjct: 13 KLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI 72
Query: 397 --ALKKLNSPETEELAFIRSFRNEAQVLSQ-------------------------MERGS 429
A+K L TE+ R F EA ++ Q ME GS
Sbjct: 73 SVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 130
Query: 430 LFRILH-NDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEA 488
L L +DA+ + + V +++ +A + YL VHRD+++ NIL+NS L
Sbjct: 131 LDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVC 184
Query: 489 FVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-M 544
V+DFG +R+L D G + +PE T DV+S+G+V EV+
Sbjct: 185 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 244
Query: 545 GKHPRDLHSTLSSSYDPKIMLIDVLDQ--RLPPPVD 578
G+ P + +S+ +I +D+ RLPPP+D
Sbjct: 245 GERP---YWEMSNQ-----DVIKAVDEGYRLPPPMD 272
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 47/215 (21%)
Query: 369 RKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEE------------------LA 410
R+I C+G G YG V++ G A+K +S + + L
Sbjct: 37 RQITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILG 95
Query: 411 FIRSFRNEAQVLSQM-------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
FI S +Q+ E GSL+ L + LD + IV ++A LA+LH
Sbjct: 96 FIASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLH 151
Query: 464 HDC-----SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLA-----GSY 513
+ P++ HRD+ S NIL+ + +AD G A ++H+ S+NQ + G+
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTK 210
Query: 514 GYIAPELAYTMVMTE------KYDVYSFGVVTLEV 542
Y+APE+ + + + D+++FG+V EV
Sbjct: 211 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 112/247 (45%), Gaps = 23/247 (9%)
Query: 341 LDYLNLSGNKLSGRVPYSNKHLSSMPTPRKIDSKYCIGTGAYGSVYKAQLPN-GRVFALK 399
LD N+S +K+ G + + P K + I T G K + G +
Sbjct: 30 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 89
Query: 400 KLNSPETEELAFIRSFRNEAQVLSQ-MERGSLFRILH-NDAEAVELDWAKRVNIVKAMAH 457
+ + P L + + ++++ ME GSL L +DA+ + + V +++ +A
Sbjct: 90 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIAS 146
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YG 514
+ YL VHRD+++ NIL+NS L V+DFG +R+L D G
Sbjct: 147 GMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 203
Query: 515 YIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRDLHSTLSSSYDPKIMLIDVLDQ-- 571
+ +PE T DV+S+G+V EV+ G+ P + +S+ +I +D+
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQ-----DVIKAVDEGY 255
Query: 572 RLPPPVD 578
RLPPP+D
Sbjct: 256 RLPPPMD 262
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 104/238 (43%), Gaps = 52/238 (21%)
Query: 377 IGTGAYGSVY--KAQLPNGRVF--ALKKLNSPETEELAFIRSFRNEAQVLSQ-------- 424
+G G +G V + +LP+ + A+K L TE+ R F EA ++ Q
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIR 81
Query: 425 -----------------MERGSLFRILH-NDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
ME GSL L +DA+ + + V +++ +A + YL
Sbjct: 82 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYLS--- 135
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYT 523
VHRD+++ NIL+NS L V+DFG +R+L D G + +PE
Sbjct: 136 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 524 MVMTEKYDVYSFGVVTLEVL-MGKHPRDLHSTLSSSYDPKIMLIDVLDQ--RLPPPVD 578
T DV+S+G+V EV+ G+ P S +I +D+ RLPPP+D
Sbjct: 196 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------VIKAVDEGYRLPPPMD 245
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 112/247 (45%), Gaps = 23/247 (9%)
Query: 341 LDYLNLSGNKLSGRVPYSNKHLSSMPTPRKIDSKYCIGTGAYGSVYKAQLPN-GRVFALK 399
LD N+S +K+ G + + P K + I T G K + G +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 400 KLNSPETEELAFIRSFRNEAQVLSQ-MERGSLFRILH-NDAEAVELDWAKRVNIVKAMAH 457
+ + P L + + ++++ ME GSL L +DA+ + + V +++ +A
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIAS 158
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YG 514
+ YL VHRD+++ NIL+NS L V+DFG +R+L D G
Sbjct: 159 GMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 515 YIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRDLHSTLSSSYDPKIMLIDVLDQ-- 571
+ +PE T DV+S+G+V EV+ G+ P + +S+ +I +D+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQ-----DVIKAVDEGY 267
Query: 572 RLPPPVD 578
RLPPP+D
Sbjct: 268 RLPPPMD 274
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 45/235 (19%)
Query: 363 SSMPTPRKIDSKY----CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRN 417
S M TP + +Y +G G V+ A+ L + R A+K L + + +F FR
Sbjct: 2 SHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRR 61
Query: 418 EAQ-----------------------------VLSQMERGSLFRILHNDAEAVELDWAKR 448
EAQ V+ ++ +L I+H + + +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRA 118
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN--- 505
+ ++ AL + H + ++HRD+ NIL+++ V DFG AR + ADS N
Sbjct: 119 IEVIADACQALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAI-ADSGNSVX 174
Query: 506 QTL-LAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
QT + G+ Y++PE A + + DVYS G V EVL G+ P S +S +Y
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 34/206 (16%)
Query: 368 PRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME 426
P+ S +G+GAYGSV A +G A+KKL+ P E+ R++R E +L M+
Sbjct: 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQ 99
Query: 427 RGSLFRIL----------------------HNDAEAV---ELDWAKRVNIVKAMAHALAY 461
++ +L D + + E K +V M L Y
Sbjct: 100 HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKY 159
Query: 462 LHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
+H S VVHRD+ N+ +N E + DFG AR HAD+ + + Y APE+
Sbjct: 160 IH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYVVTRW-YRAPEVI 213
Query: 522 YT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L GK
Sbjct: 214 LSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 112/247 (45%), Gaps = 23/247 (9%)
Query: 341 LDYLNLSGNKLSGRVPYSNKHLSSMPTPRKIDSKYCIGTGAYGSVYKAQLPN-GRVFALK 399
LD N+S +K+ G + + P K + I T G K + G +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 400 KLNSPETEELAFIRSFRNEAQVLSQ-MERGSLFRILH-NDAEAVELDWAKRVNIVKAMAH 457
+ + P L + + ++++ ME GSL L +DA+ + + V +++ +A
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIAS 158
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YG 514
+ YL VHRD+++ NIL+NS L V+DFG +R+L D G
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 515 YIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRDLHSTLSSSYDPKIMLIDVLDQ-- 571
+ +PE T DV+S+G+V EV+ G+ P + +S+ +I +D+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQ-----DVIKAVDEGY 267
Query: 572 RLPPPVD 578
RLPPP+D
Sbjct: 268 RLPPPMD 274
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 52/238 (21%)
Query: 377 IGTGAYGSVY--KAQLPNGRVF--ALKKLNSPETEELAFIRSFRNEAQVLSQ-------- 424
+G G +G V + +LP+ + A+K L TE+ R F EA ++ Q
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIR 110
Query: 425 -----------------MERGSLFRILH-NDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
ME GSL L +DA+ + + V +++ +A + YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL---S 164
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYT 523
VHRD+++ NIL+NS L V+DFG +R+L D G + +PE
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 524 MVMTEKYDVYSFGVVTLEVL-MGKHPRDLHSTLSSSYDPKIMLIDVLDQ--RLPPPVD 578
T DV+S+G+V EV+ G+ P + +S+ +I +D+ RLPPP+D
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQ-----DVIKAVDEGYRLPPPMD 274
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 111/247 (44%), Gaps = 23/247 (9%)
Query: 341 LDYLNLSGNKLSGRVPYSNKHLSSMPTPRKIDSKYCIGTGAYGSVYKAQLPN-GRVFALK 399
LD N+S +K+ G + + P K + I T G K + G +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 400 KLNSPETEELAFIRSFRNEAQVLSQ-MERGSLFRILH-NDAEAVELDWAKRVNIVKAMAH 457
+ + P L + + ++++ ME GSL L +DA+ + + V +++ +A
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIAS 158
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YG 514
+ YL VHRD+++ NIL+NS L V+DFG R+L D G
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIR 215
Query: 515 YIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRDLHSTLSSSYDPKIMLIDVLDQ-- 571
+ +PE T DV+S+G+V EV+ G+ P + +S+ +I +D+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQ-----DVIKAVDEGY 267
Query: 572 RLPPPVD 578
RLPPP+D
Sbjct: 268 RLPPPMD 274
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
VL R SL LH +A+ A+ ++ + YLH + V+HRD+ N+
Sbjct: 117 VLELCRRRSLLE-LHKRRKALTEPEAR--YYLRQIVLGCQYLHRN---RVIHRDLKLGNL 170
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTL 540
LN LE + DFG A + D + +L G+ YIAPE+ + + DV+S G +
Sbjct: 171 FLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY 230
Query: 541 EVLMGKHPRDLHSTLSSSY 559
+L+GK P + S L +Y
Sbjct: 231 TLLVGKPPFET-SCLKETY 248
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
VL R SL LH +A+ A+ ++ + YLH + V+HRD+ N+
Sbjct: 119 VLELCRRRSLLE-LHKRRKALTEPEAR--YYLRQIVLGCQYLHRN---RVIHRDLKLGNL 172
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTL 540
LN LE + DFG A + D + +L G+ YIAPE+ + + DV+S G +
Sbjct: 173 FLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY 232
Query: 541 EVLMGKHPRDLHSTLSSSY 559
+L+GK P + S L +Y
Sbjct: 233 TLLVGKPPFET-SCLKETY 250
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 377 IGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER-------- 427
+G G++ VY+A+ + G A+K ++ + ++ +NE ++ Q++
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 428 -----------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSV 470
G + R L N + + A+ + + + + YLH S +
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR--HFMHQIITGMLYLH---SHGI 133
Query: 471 VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKY 530
+HRD++ +N+LL + +ADFG A L L G+ YI+PE+A +
Sbjct: 134 LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLES 193
Query: 531 DVYSFGVVTLEVLMGKHPRD 550
DV+S G + +L+G+ P D
Sbjct: 194 DVWSLGCMFYTLLIGRPPFD 213
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 47/208 (22%)
Query: 376 CIGTGAYGSVYKAQLPNGRVFALKKLNSPETEE------------------LAFIRSFRN 417
C+G G YG V++ G A+K +S + + L FI S
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 418 EAQVLSQM-------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDC---- 466
+Q+ E GSL+ L + LD + IV ++A LA+LH +
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 467 -SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLA-----GSYGYIAPEL 520
P++ HRD+ S NIL+ + +AD G A ++H+ S+NQ + G+ Y+APE+
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 521 AYTMVMTE------KYDVYSFGVVTLEV 542
+ + + D+++FG+V EV
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 47/208 (22%)
Query: 376 CIGTGAYGSVYKAQLPNGRVFALKKLNSPETEE------------------LAFIRSFRN 417
C+G G YG V++ G A+K +S + + L FI S
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 418 EAQVLSQM-------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDC---- 466
+Q+ E GSL+ L + LD + IV ++A LA+LH +
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 467 -SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLA-----GSYGYIAPEL 520
P++ HRD+ S NIL+ + +AD G A ++H+ S+NQ + G+ Y+APE+
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 521 AYTMVMTE------KYDVYSFGVVTLEV 542
+ + + D+++FG+V EV
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
VL R SL LH +A+ A+ ++ + YLH + V+HRD+ N+
Sbjct: 93 VLELCRRRSLLE-LHKRRKALTEPEAR--YYLRQIVLGCQYLHRN---RVIHRDLKLGNL 146
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTL 540
LN LE + DFG A + D + +L G+ YIAPE+ + + DV+S G +
Sbjct: 147 FLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY 206
Query: 541 EVLMGKHPRDLHSTLSSSY 559
+L+GK P + S L +Y
Sbjct: 207 TLLVGKPPFET-SCLKETY 224
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 45/235 (19%)
Query: 363 SSMPTPRKIDSKY----CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRN 417
S M TP + +Y +G G V+ A+ L + R A+K L + + +F FR
Sbjct: 2 SHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRR 61
Query: 418 EAQ-----------------------------VLSQMERGSLFRILHNDAEAVELDWAKR 448
EAQ V+ ++ +L I+H + + +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRA 118
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN--- 505
+ ++ AL + H + ++HRD+ NI++++ V DFG AR + ADS N
Sbjct: 119 IEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVT 174
Query: 506 QT-LLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
QT + G+ Y++PE A + + DVYS G V EVL G+ P S +S +Y
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 7/139 (5%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
VL R SL LH +A+ A+ ++ + YLH + V+HRD+ N+
Sbjct: 95 VLELCRRRSLLE-LHKRRKALTEPEAR--YYLRQIVLGCQYLHRN---RVIHRDLKLGNL 148
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTL 540
LN LE + DFG A + D + L G+ YIAPE+ + + DV+S G +
Sbjct: 149 FLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY 208
Query: 541 EVLMGKHPRDLHSTLSSSY 559
+L+GK P + S L +Y
Sbjct: 209 TLLVGKPPFET-SCLKETY 226
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 7/139 (5%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
VL R SL LH +A+ A+ ++ + YLH + V+HRD+ N+
Sbjct: 99 VLELCRRRSLLE-LHKRRKALTEPEAR--YYLRQIVLGCQYLHRN---RVIHRDLKLGNL 152
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTL 540
LN LE + DFG A + D + L G+ YIAPE+ + + DV+S G +
Sbjct: 153 FLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY 212
Query: 541 EVLMGKHPRDLHSTLSSSY 559
+L+GK P + S L +Y
Sbjct: 213 TLLVGKPPFET-SCLKETY 230
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 7/139 (5%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
VL R SL LH +A+ A+ ++ + YLH + V+HRD+ N+
Sbjct: 95 VLELCRRRSLLE-LHKRRKALTEPEAR--YYLRQIVLGCQYLHRN---RVIHRDLKLGNL 148
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTL 540
LN LE + DFG A + D + L G+ YIAPE+ + + DV+S G +
Sbjct: 149 FLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY 208
Query: 541 EVLMGKHPRDLHSTLSSSY 559
+L+GK P + S L +Y
Sbjct: 209 TLLVGKPPFET-SCLKETY 226
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 33/195 (16%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGS---LFRI 433
IG G YG VYKAQ G FALKK+ E E+ + E +L +++ + L+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRL-EKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 434 LHNDA------EAVELDWAKRVNIVKA-------------MAHALAYLHHDCSPSVVHRD 474
+H E ++ D K +++ + + + +AY H V+HRD
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 475 ISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKY---- 530
+ N+L+N + E +ADFG AR T + Y AP++ ++ ++KY
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDV---LMGSKKYSTTI 182
Query: 531 DVYSFGVVTLEVLMG 545
D++S G + E++ G
Sbjct: 183 DIWSVGCIFAEMVNG 197
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 28/200 (14%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPN-GRVFALK--KLNSPETEELAF-----IRSFRN----- 417
+DS IG G+ G V A+ + GR A+K L + EL F +R +++
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 418 ---------EAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSP 468
E VL + +G L + V L+ + + +A+ ALAYLH +
Sbjct: 107 MYKSYLVGEELWVLMEFLQGG---ALTDIVSQVRLNEEQIATVCEAVLQALAYLH---AQ 160
Query: 469 SVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTE 528
V+HRDI S++ILL ++DFG + D + L G+ ++APE+ +
Sbjct: 161 GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYAT 220
Query: 529 KYDVYSFGVVTLEVLMGKHP 548
+ D++S G++ +E++ G+ P
Sbjct: 221 EVDIWSLGIMVIEMVDGEPP 240
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 33/195 (16%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGS---LFRI 433
IG G YG VYKAQ G FALKK+ E E+ + E +L +++ + L+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRL-EKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 434 LHNDA------EAVELDWAKRVNIVKA-------------MAHALAYLHHDCSPSVVHRD 474
+H E ++ D K +++ + + + +AY H V+HRD
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 475 ISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKY---- 530
+ N+L+N + E +ADFG AR T + Y AP++ ++ ++KY
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDV---LMGSKKYSTTI 182
Query: 531 DVYSFGVVTLEVLMG 545
D++S G + E++ G
Sbjct: 183 DIWSVGCIFAEMVNG 197
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 34/206 (16%)
Query: 368 PRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME 426
P+ S +G+GAYGSV A +G A+KKL+ P E+ R++R E +L M+
Sbjct: 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQ 81
Query: 427 RGSLFRIL----------------------HNDAEAV---ELDWAKRVNIVKAMAHALAY 461
++ +L D + + + K +V M L Y
Sbjct: 82 HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKY 141
Query: 462 LHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
+H S VVHRD+ N+ +N E + DFG AR HAD+ + + Y APE+
Sbjct: 142 IH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYVVTRW-YRAPEVI 195
Query: 522 YT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L GK
Sbjct: 196 LSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 33/195 (16%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGS---LFRI 433
IG G YG VYKAQ G FALKK+ E E+ + E +L +++ + L+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRL-EKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 434 LHNDA------EAVELDWAKRVNIVKA-------------MAHALAYLHHDCSPSVVHRD 474
+H E ++ D K +++ + + + +AY H V+HRD
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 475 ISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKY---- 530
+ N+L+N + E +ADFG AR T + Y AP++ ++ ++KY
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDV---LMGSKKYSTTI 182
Query: 531 DVYSFGVVTLEVLMG 545
D++S G + E++ G
Sbjct: 183 DIWSVGCIFAEMVNG 197
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 41/228 (17%)
Query: 377 IGTGAYGSVYKA-QLPNGRVFALKKL-------------------NSPETEELAFIRSFR 416
+G G+YGSVYKA G++ A+K++ +SP + + S+
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHV--VKYYGSYF 94
Query: 417 NEAQVLSQME---RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+ ME GS+ I+ + + D + I+++ L YLH +HR
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTED--EIATILQSTLKGLEYLHF---MRKIHR 149
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
DI + NILLN++ A +ADFG A L + + + G+ ++APE+ + D++
Sbjct: 150 DIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIW 209
Query: 534 SFGVVTLEVLMGKHP-RDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRK 580
S G+ +E+ GK P D+H + I +I PPP RK
Sbjct: 210 SLGITAIEMAEGKPPYADIHPMRA------IFMIPT----NPPPTFRK 247
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
VL R SL LH +AV A+ ++ + YLH++ V+HRD+ N+
Sbjct: 120 VLEICRRRSLLE-LHKRRKAVTEPEAR--YFMRQTIQGVQYLHNN---RVIHRDLKLGNL 173
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTL 540
LN ++ + DFG A + D + L G+ YIAPE+ + + D++S G +
Sbjct: 174 FLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILY 233
Query: 541 EVLMGKHPRDLHSTLSSSY 559
+L+GK P + S L +Y
Sbjct: 234 TLLVGKPPFET-SCLKETY 251
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 102/245 (41%), Gaps = 54/245 (22%)
Query: 370 KIDSKYCIGTGAYGSVYKAQL--PNGR--VFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
+I + IG+G G V +L P R A+K L + TE R F +EA ++ Q
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR--RDFLSEASIMGQF 107
Query: 426 E------------RGSLFRILHNDAEAVELDWAKR-----------VNIVKAMAHALAYL 462
+ RG L I+ E LD R V +++ + + YL
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE 519
VHRD+++ N+L++S L V+DFG +R+L D G + APE
Sbjct: 168 ---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPE 224
Query: 520 LAYTMVMTEKYDVYSFGVVTLEVL-MGKHP------RDLHSTLSSSYDPKIMLIDVLDQR 572
+ DV+SFGVV EVL G+ P RD+ S++ Y R
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY------------R 272
Query: 573 LPPPV 577
LP P+
Sbjct: 273 LPAPM 277
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
VL R SL LH +AV A+ ++ + YLH++ V+HRD+ N+
Sbjct: 120 VLEICRRRSLLE-LHKRRKAVTEPEAR--YFMRQTIQGVQYLHNN---RVIHRDLKLGNL 173
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTL 540
LN ++ + DFG A + D + L G+ YIAPE+ + + D++S G +
Sbjct: 174 FLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILY 233
Query: 541 EVLMGKHPRDLHSTLSSSY 559
+L+GK P + S L +Y
Sbjct: 234 TLLVGKPPFET-SCLKETY 251
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 45/224 (20%)
Query: 363 SSMPTPRKIDSKY----CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRN 417
S M TP + +Y +G G V+ A+ L + R A+K L + + +F FR
Sbjct: 2 SHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRR 61
Query: 418 EAQ-----------------------------VLSQMERGSLFRILHNDAEAVELDWAKR 448
EAQ V+ ++ +L I+H + + +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRA 118
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN--- 505
+ ++ AL + H + ++HRD+ NI++++ V DFG AR + ADS N
Sbjct: 119 IEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVT 174
Query: 506 QT-LLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
QT + G+ Y++PE A + + DVYS G V EVL G+ P
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 47/210 (22%)
Query: 377 IGTGAYGSVYKA-QLPNGRVF----ALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLF 431
+G+GA+G+VYK +P G A+K LN ET F +EA +++ M+ L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILN--ETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 432 RIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALAYLH 463
R+L H D + L+W V I K M YL
Sbjct: 104 RLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC--VQIAKGMM----YLE 157
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAPELA 521
+VHRD+++ N+L+ S + DFG ARLL D G ++A E
Sbjct: 158 ER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 214
Query: 522 YTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
+ T + DV+S+GV E++ G P D
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 100/242 (41%), Gaps = 60/242 (24%)
Query: 377 IGTGAYGSVY--KAQLPNGRVF--ALKKLNSPETEELAFIRSFRNEAQVLSQ-------- 424
IG G +G V + +LP R A+K L TE+ R F EA ++ Q
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIH 87
Query: 425 -----------------MERGSLFRILH-NDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
ME GSL L ND + + + V +++ ++ + YL
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI---QLVGMLRGISAGMKYL---S 141
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYT 523
VHRD+++ NIL+NS L V+DFG +R+L D G + APE
Sbjct: 142 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAF 201
Query: 524 MVMTEKYDVYSFGVVTLEVL-MGKHP------RDLHSTLSSSYDPKIMLIDVLDQRLPPP 576
T DV+S+G+V EV+ G+ P +D+ + Y RLP P
Sbjct: 202 RKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGY------------RLPSP 249
Query: 577 VD 578
+D
Sbjct: 250 MD 251
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
VL R SL LH +AV A+ ++ + YLH++ V+HRD+ N+
Sbjct: 104 VLEICRRRSLLE-LHKRRKAVTEPEAR--YFMRQTIQGVQYLHNN---RVIHRDLKLGNL 157
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTL 540
LN ++ + DFG A + D + L G+ YIAPE+ + + D++S G +
Sbjct: 158 FLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILY 217
Query: 541 EVLMGKHPRDLHSTLSSSY 559
+L+GK P + S L +Y
Sbjct: 218 TLLVGKPPFET-SCLKETY 235
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 102/245 (41%), Gaps = 54/245 (22%)
Query: 370 KIDSKYCIGTGAYGSVYKAQL--PNGR--VFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
+I + IG+G G V +L P R A+K L + TE R F +EA ++ Q
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR--RDFLSEASIMGQF 107
Query: 426 E------------RGSLFRILHNDAEAVELDWAKR-----------VNIVKAMAHALAYL 462
+ RG L I+ E LD R V +++ + + YL
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE 519
VHRD+++ N+L++S L V+DFG +R+L D G + APE
Sbjct: 168 ---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPE 224
Query: 520 LAYTMVMTEKYDVYSFGVVTLEVL-MGKHP------RDLHSTLSSSYDPKIMLIDVLDQR 572
+ DV+SFGVV EVL G+ P RD+ S++ Y R
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY------------R 272
Query: 573 LPPPV 577
LP P+
Sbjct: 273 LPAPM 277
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 363 SSMPTPRKIDSKY----CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRN 417
S M TP + +Y +G G V+ A+ L R A+K L + + +F FR
Sbjct: 2 SHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRR 61
Query: 418 EAQ-----------------------------VLSQMERGSLFRILHNDAEAVELDWAKR 448
EAQ V+ ++ +L I+H + + +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRA 118
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN--- 505
+ ++ AL + H + ++HRD+ NI++++ V DFG AR + ADS N
Sbjct: 119 IEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVT 174
Query: 506 QT-LLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
QT + G+ Y++PE A + + DVYS G V EVL G+ P S +S +Y
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 363 SSMPTPRKIDSKY----CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRN 417
S M TP + +Y +G G V+ A+ L R A+K L + + +F FR
Sbjct: 19 SHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRR 78
Query: 418 EAQ-----------------------------VLSQMERGSLFRILHNDAEAVELDWAKR 448
EAQ V+ ++ +L I+H + + +
Sbjct: 79 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRA 135
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN--- 505
+ ++ AL + H + ++HRD+ NI++++ V DFG AR + ADS N
Sbjct: 136 IEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVT 191
Query: 506 QT-LLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
QT + G+ Y++PE A + + DVYS G V EVL G+ P S +S +Y
Sbjct: 192 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 246
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 98/239 (41%), Gaps = 54/239 (22%)
Query: 377 IGTGAYGSVY--KAQLPNGR--VFALKKLNSPETEELAFIRSFRNEAQVLSQME------ 426
IG G +G V + +LP R A+K L TE+ R F EA ++ Q +
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQR--RDFLCEASIMGQFDHPNVVH 108
Query: 427 ------RGSLFRILHNDAEAVELDWAKR-----------VNIVKAMAHALAYLHHDCSPS 469
RG I+ E LD R V +++ +A + YL
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL---ADMG 165
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVM 526
VHRD+++ NIL+NS L V+DFG +R++ D G + APE
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKF 225
Query: 527 TEKYDVYSFGVVTLEVL-MGKHP------RDLHSTLSSSYDPKIMLIDVLDQRLPPPVD 578
T DV+S+G+V EV+ G+ P +D+ + Y RLP P+D
Sbjct: 226 TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY------------RLPAPMD 272
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 47/210 (22%)
Query: 377 IGTGAYGSVYKA-QLPNGRVF----ALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLF 431
+G+GA+G+VYK +P G A+K LN ET F +EA +++ M+ L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILN--ETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 432 RIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALAYLH 463
R+L H D + L+W V I K M YL
Sbjct: 81 RLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC--VQIAKGMM----YLE 134
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAPELA 521
+VHRD+++ N+L+ S + DFG ARLL D G ++A E
Sbjct: 135 ER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 522 YTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
+ T + DV+S+GV E++ G P D
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 363 SSMPTPRKIDSKY----CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRN 417
S M TP + +Y +G G V+ A+ L R A+K L + + +F FR
Sbjct: 2 SHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRR 61
Query: 418 EAQ-----------------------------VLSQMERGSLFRILHNDAEAVELDWAKR 448
EAQ V+ ++ +L I+H + + +
Sbjct: 62 EAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRA 118
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN--- 505
+ ++ AL + H + ++HRD+ NI++++ V DFG AR + ADS N
Sbjct: 119 IEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVT 174
Query: 506 QT-LLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
QT + G+ Y++PE A + + DVYS G V EVL G+ P S +S +Y
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 47/215 (21%)
Query: 369 RKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEE------------------LA 410
R++ C+G G YG V++ L +G A+K +S + + L
Sbjct: 8 RQVALVECVGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILG 66
Query: 411 FIRSFRNEAQVLSQM-------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
FI S +Q+ E GSL+ L + +E A R+ + + A LA+LH
Sbjct: 67 FIASDMTSRNSSTQLWLITHYHEHGSLYDFLQR--QTLEPHLALRLAV--SAACGLAHLH 122
Query: 464 HDC-----SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLA-----GSY 513
+ P++ HRD S N+L+ S L+ +AD G A ++H+ S+ + G+
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTK 181
Query: 514 GYIAPELAYTMVMTEKY------DVYSFGVVTLEV 542
Y+APE+ + T+ + D+++FG+V E+
Sbjct: 182 RYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
VL R SL LH +AV A+ ++ + YLH++ V+HRD+ N+
Sbjct: 120 VLEICRRRSLLE-LHKRRKAVTEPEAR--YFMRQTIQGVQYLHNN---RVIHRDLKLGNL 173
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTL 540
LN ++ + DFG A + D + L G+ YIAPE+ + + D++S G +
Sbjct: 174 FLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILY 233
Query: 541 EVLMGKHPRDLHSTLSSSY 559
+L+GK P + S L +Y
Sbjct: 234 TLLVGKPPFET-SCLKETY 251
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 112/255 (43%), Gaps = 51/255 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--EELAFIRSFRNEA-----QVLSQ- 424
+G G +G V+ A+K L SPE+ EE ++ +++ V+S+
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEE 76
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
M +GSL L D E L V++ +A +AY+ + +HRD+
Sbjct: 77 PIYIVTEYMNKGSLLDFL-KDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLR 132
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
S NIL+ + L +ADFG ARL+ + + T G+ + APE A T K DV+
Sbjct: 133 SANILVGNGLICKIADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 534 SFGVVTLE-VLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ-----RLPPPVDRKVIQDILL 587
SFG++ E V G+ P P + +VL+Q R+P P D + L+
Sbjct: 191 SFGILLTELVTKGRVPY-----------PGMNNREVLEQVERGYRMPCPQDCPISLHELM 239
Query: 588 VSTISFACLQSNPKS 602
+ C + +P+
Sbjct: 240 IH-----CWKKDPEE 249
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 30/210 (14%)
Query: 398 LKKLNSPETEELAFIRSFRNEAQV---LSQMERGSLFRILHNDAEAVELDWAKRVNIVKA 454
L + NSP + F +F ++ ++ + M+ GSL ++L E K V+I A
Sbjct: 61 LHECNSPYI--VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-VSI--A 115
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG 514
+ L YL ++HRD+ +NIL+NS+ E + DFG + L + +N+ G+
Sbjct: 116 VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANE--FVGTRS 171
Query: 515 YIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRL- 573
Y++PE + + D++S G+ +E+ +G++PR P + + ++LD +
Sbjct: 172 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPR-----------PPMAIFELLDYIVN 220
Query: 574 -PPPVDRKVIQDILLVSTISFA--CLQSNP 600
PPP K+ + + F CL NP
Sbjct: 221 EPPP---KLPSAVFSLEFQDFVNKCLIKNP 247
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 41/204 (20%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRNEA--QVLSQMERGSLFRI 433
IG GAYG+VYKA+ P+ G ALK + P EE I + R A + L E ++ R+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 434 LHNDA--------------EAVELDWAKRVN--------------IVKAMAHALAYLHHD 465
+ A E V+ D ++ +++ L +LH +
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 131
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAG---SYGYIAPELAY 522
C +VHRD+ NIL+ S +ADFG AR+ S Q LA + Y APE+
Sbjct: 132 C---IVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALAPVVVTLWYRAPEVLL 184
Query: 523 TMVMTEKYDVYSFGVVTLEVLMGK 546
D++S G + E+ K
Sbjct: 185 QSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 38/213 (17%)
Query: 376 CIGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL 434
IG G++G V Q + +++A+K +N + E +R+ E Q++ +E L +
Sbjct: 22 AIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLW 81
Query: 435 H--NDAEAV----------ELDWAKRVNI----------VKAMAHALAYLHHDCSPSVVH 472
+ D E + +L + + N+ + + AL YL + ++H
Sbjct: 82 YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIH 138
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPEL-------AYTMV 525
RD+ +NILL+ + DF A +L ++ T +AG+ Y+APE+ Y+
Sbjct: 139 RDMKPDNILLDEHGHVHITDFNIAAMLPRETQ-ITTMAGTKPYMAPEMFSSRKGAGYSFA 197
Query: 526 MTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSS 558
+ D +S GV E+L G+ P + S+ SS
Sbjct: 198 V----DWWSLGVTAYELLRGRRPYHIRSSTSSK 226
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 32/199 (16%)
Query: 375 YCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFR- 432
Y IGTG+YG K + +G++ K+L+ E A + +E +L +++ ++ R
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLLRELKHPNIVRY 70
Query: 433 ---------------------------ILHNDAEAVELDWAKRVNIVKAMAHALAYLHH- 464
I E LD + ++ + AL H
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 465 -DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYT 523
D +V+HRD+ N+ L+ K + DFG AR+L+ D+S G+ Y++PE
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNR 190
Query: 524 MVMTEKYDVYSFGVVTLEV 542
M EK D++S G + E+
Sbjct: 191 MSYNEKSDIWSLGCLLYEL 209
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 109/255 (42%), Gaps = 51/255 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--EELAFIRSFRNEAQV--------- 421
+G G +G V+ A+K L SPE +E ++ R+E V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 422 -----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
+ M +GSL L + L + V++ +A +AY+ + VHRD+
Sbjct: 86 PIYIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERM---NYVHRDLR 141
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL+ L VADFG ARL+ + + T G+ + APE A T K DV+
Sbjct: 142 AANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 534 SFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ-----RLP-PPVDRKVIQDILL 587
SFG++ E+ +T P ++ +VLDQ R+P PP + + D++
Sbjct: 200 SFGILLTEL----------TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 588 VSTISFACLQSNPKS 602
C + +P+
Sbjct: 250 ------QCWRKDPEE 258
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 35/201 (17%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRNEA--QVLSQMERGSLFRI 433
IG GAYG+VYKA+ P+ G ALK + P EE I + R A + L E ++ R+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 434 LHNDA--------------EAVELDWAKRVN--------------IVKAMAHALAYLHHD 465
+ A E V+ D ++ +++ L +LH +
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 131
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
C +VHRD+ NIL+ S +ADFG AR+ + ++ + Y APE+
Sbjct: 132 C---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLW-YRAPEVLLQST 187
Query: 526 MTEKYDVYSFGVVTLEVLMGK 546
D++S G + E+ K
Sbjct: 188 YATPVDMWSVGCIFAEMFRRK 208
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVATRW-YRAPE 192
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 74
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 135 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVATRW-YRAPE 188
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 37/205 (18%)
Query: 374 KYCIGTGAYGSVY-------------------KAQLPNGRVFA----LKKLNSPETEEL- 409
K +G+GA+G V+ ++Q+P ++ A LK L+ P ++
Sbjct: 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIF 86
Query: 410 AFIRSFRNEAQVLSQMERGSLF-RILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSP 468
+ N V+ E G L RI+ A L ++K M +ALAY H S
Sbjct: 87 EVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQ 143
Query: 469 SVVHRDISSNNILL-----NSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYT 523
VVH+D+ NIL +S ++ + DFG A L +D + T AG+ Y+APE+ +
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIK--IIDFGLAELFKSD-EHSTNAAGTALYMAPEV-FK 199
Query: 524 MVMTEKYDVYSFGVVTLEVLMGKHP 548
+T K D++S GVV +L G P
Sbjct: 200 RDVTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 32/199 (16%)
Query: 375 YCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFR- 432
Y IGTG+YG K + +G++ K+L+ E A + +E +L +++ ++ R
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLLRELKHPNIVRY 70
Query: 433 ---------------------------ILHNDAEAVELDWAKRVNIVKAMAHALAYLHH- 464
I E LD + ++ + AL H
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 465 -DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYT 523
D +V+HRD+ N+ L+ K + DFG AR+L+ D+S G+ Y++PE
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNR 190
Query: 524 MVMTEKYDVYSFGVVTLEV 542
M EK D++S G + E+
Sbjct: 191 MSYNEKSDIWSLGCLLYEL 209
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVATRW-YRAPE 192
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 111/256 (43%), Gaps = 53/256 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--EELAFIRSFRNEA-----QVLSQ- 424
+G G +G V+ A+K L SPE +E ++ R+E V+S+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
M +GSL L + L + V++ +A +AY+ + VHRD+
Sbjct: 252 PIYIVGEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 307
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY---GYIAPELAYTMVMTEKYDVY 533
+ NIL+ L VADFG ARL+ + + T G+ + APE A T K DV+
Sbjct: 308 AANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 534 SFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQ-----RLP-PPVDRKVIQDIL 586
SFG++ E+ G+ P P ++ +VLDQ R+P PP + + D++
Sbjct: 366 SFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPECPESLHDLM 414
Query: 587 LVSTISFACLQSNPKS 602
C + P+
Sbjct: 415 C------QCWRKEPEE 424
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 111/256 (43%), Gaps = 53/256 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--EELAFIRSFRNEA-----QVLSQ- 424
+G G +G V+ A+K L SPE +E ++ R+E V+S+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
M +GSL L + L + V++ +A +AY+ + VHRD+
Sbjct: 252 PIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 307
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY---GYIAPELAYTMVMTEKYDVY 533
+ NIL+ L VADFG ARL+ + + T G+ + APE A T K DV+
Sbjct: 308 AANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 534 SFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQ-----RLP-PPVDRKVIQDIL 586
SFG++ E+ G+ P P ++ +VLDQ R+P PP + + D++
Sbjct: 366 SFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPECPESLHDLM 414
Query: 587 LVSTISFACLQSNPKS 602
C + P+
Sbjct: 415 C------QCWRKEPEE 424
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 109/255 (42%), Gaps = 51/255 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--EELAFIRSFRNEAQV--------- 421
+G G +G V+ A+K L SPE +E ++ R+E V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 422 -----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
+ M +GSL L + L + V++ +A +AY+ + VHRD+
Sbjct: 86 PIYIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERM---NYVHRDLR 141
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL+ L VADFG ARL+ + + T G+ + APE A T K DV+
Sbjct: 142 AANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 534 SFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ-----RLP-PPVDRKVIQDILL 587
SFG++ E+ +T P ++ +VLDQ R+P PP + + D++
Sbjct: 200 SFGILLTEL----------TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 588 VSTISFACLQSNPKS 602
C + +P+
Sbjct: 250 ------QCWRKDPEE 258
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 40 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 98
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 159 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGXVATRW-YRAPE 212
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 39 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 97
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 98 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 157
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 158 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 211
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 111/256 (43%), Gaps = 53/256 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--EELAFIRSFRNEA-----QVLSQ- 424
+G G +G V+ A+K L SPE +E ++ R+E V+S+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
M +GSL L + L + V++ +A +AY+ + VHRD+
Sbjct: 252 PIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 307
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL+ L VADFG ARL+ + + T G+ + APE A T K DV+
Sbjct: 308 AANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 534 SFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQ-----RLP-PPVDRKVIQDIL 586
SFG++ E+ G+ P P ++ +VLDQ R+P PP + + D++
Sbjct: 366 SFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPECPESLHDLM 414
Query: 587 LVSTISFACLQSNPKS 602
C + P+
Sbjct: 415 C------QCWRKEPEE 424
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 40 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 98
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 159 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 212
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 112/255 (43%), Gaps = 51/255 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--EELAFIRSFRNEA-----QVLSQ- 424
+G G +G V+ A+K L SPE +E ++ R+E V+S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
M +GSL L + L + V++ +A +AY+ + VHRD++
Sbjct: 86 PIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERM---NYVHRDLA 141
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL+ L VADFG ARL+ + + T G+ + APE A T K DV+
Sbjct: 142 AANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 534 SFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ-----RLP-PPVDRKVIQDILL 587
SFG++ E+ +T P ++ +VLDQ R+P PP + + D++
Sbjct: 200 SFGILLTEL----------TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 588 VSTISFACLQSNPKS 602
C + +P+
Sbjct: 250 ------QCWRKDPEE 258
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 83/154 (53%), Gaps = 12/154 (7%)
Query: 398 LKKLNSPETEELAFIRSFRNEAQV---LSQMERGSLFRILHNDAEAVELDWAKRVNIVKA 454
L + NSP + F +F ++ ++ + M+ GSL ++L +A+ + + +V+I A
Sbjct: 68 LHECNSPYI--VGFYGAFYSDGEISICMEHMDGGSLDQVL-KEAKRIPEEILGKVSI--A 122
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG 514
+ LAYL ++HRD+ +NIL+NS+ E + DFG + L +N G+
Sbjct: 123 VLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRS 178
Query: 515 YIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y+APE + + D++S G+ +E+ +G++P
Sbjct: 179 YMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 74
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 135 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 188
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 30 VPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 88
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 89 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 148
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 149 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 202
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 203 IMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 192
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 443 LDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD 502
LD + I++ + L YLH S +HRDI + N+LL+ E +ADFG A L
Sbjct: 121 LDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 177
Query: 503 SSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPR-DLH 552
+ G+ ++APE+ K D++S G+ +E+ G+ P +LH
Sbjct: 178 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 228
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 110/255 (43%), Gaps = 51/255 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--EELAFIRSFRNEA-----QVLSQ- 424
+G G +G V+ A+K L SPE +E ++ R+E V+S+
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 75
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
M +GSL L + L + V++ +A +AY+ + VHRD+
Sbjct: 76 PIXIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERM---NYVHRDLR 131
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL+ L VADFG ARL+ + + T G+ + APE A T K DV+
Sbjct: 132 AANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 189
Query: 534 SFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ-----RLP-PPVDRKVIQDILL 587
SFG++ E+ +T P ++ +VLDQ R+P PP + + D++
Sbjct: 190 SFGILLTEL----------TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 239
Query: 588 VSTISFACLQSNPKS 602
C + P+
Sbjct: 240 ------QCWRKEPEE 248
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 111/256 (43%), Gaps = 53/256 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--EELAFIRSFRNEA-----QVLSQ- 424
+G G +G V+ A+K L SPE +E ++ R+E V+S+
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 334
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
M +GSL L + L + V++ +A +AY+ + VHRD+
Sbjct: 335 PIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERM---NYVHRDLR 390
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY---GYIAPELAYTMVMTEKYDVY 533
+ NIL+ L VADFG ARL+ + + T G+ + APE A T K DV+
Sbjct: 391 AANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 448
Query: 534 SFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQ-----RLP-PPVDRKVIQDIL 586
SFG++ E+ G+ P P ++ +VLDQ R+P PP + + D++
Sbjct: 449 SFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPECPESLHDLM 497
Query: 587 LVSTISFACLQSNPKS 602
C + P+
Sbjct: 498 C------QCWRKEPEE 507
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 443 LDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD 502
LD + I++ + L YLH S +HRDI + N+LL+ E +ADFG A L
Sbjct: 101 LDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 157
Query: 503 SSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPR-DLH 552
+ G+ ++APE+ K D++S G+ +E+ G+ P +LH
Sbjct: 158 QIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 208
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 39/210 (18%)
Query: 367 TPRKIDSKYCIGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLS 423
P+++ +G+GAYGSV Y A+L A+KKL+ P + R++R E ++L
Sbjct: 18 VPQRLQGLRPVGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYR-ELRLLK 74
Query: 424 QMERGSLFRILHNDAEAVELDWAKRV------------NIVKAMA--------------H 457
++ ++ +L A ++ V NIVK A
Sbjct: 75 HLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR 134
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIA 517
L Y+H S ++HRD+ +N+ +N E + DFG AR AD +A + Y A
Sbjct: 135 GLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR--QADEEMTGYVATRW-YRA 188
Query: 518 PELAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
PE+ M + D++S G + E+L GK
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 439 EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARL 498
E LD + I++ + L YLH S +HRDI + N+LL+ E +ADFG A
Sbjct: 112 EPGPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQ 168
Query: 499 LHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPR-DLH 552
L + G+ ++APE+ K D++S G+ +E+ G+ P +LH
Sbjct: 169 LTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 223
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 74
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKA--------------MAHAL 459
+ ++ +L ND V L A NIVK + L
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGL 134
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 135 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 188
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 108/255 (42%), Gaps = 51/255 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--EELAFIRSFRNEAQV--------- 421
+G G +G V+ A+K L SPE +E ++ R+E V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 422 -----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
M +GSL L + L + V++ +A +AY+ + VHRD+
Sbjct: 86 PIYIVCEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERM---NYVHRDLR 141
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL+ L VADFG ARL+ + + T G+ + APE A T K DV+
Sbjct: 142 AANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 534 SFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ-----RLP-PPVDRKVIQDILL 587
SFG++ E+ +T P ++ +VLDQ R+P PP + + D++
Sbjct: 200 SFGILLTEL----------TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 588 VSTISFACLQSNPKS 602
C + +P+
Sbjct: 250 ------QCWRKDPEE 258
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 443 LDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD 502
LD + I++ + L YLH S +HRDI + N+LL+ E +ADFG A L
Sbjct: 101 LDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 157
Query: 503 SSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPR-DLH 552
+ G+ ++APE+ K D++S G+ +E+ G+ P +LH
Sbjct: 158 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 208
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 35/201 (17%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRNEA--QVLSQMERGSLFRI 433
IG GAYG+VYKA+ P+ G ALK + P EE I + R A + L E ++ R+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 434 LHNDA--------------EAVELDWAKRVN--------------IVKAMAHALAYLHHD 465
+ A E V+ D ++ +++ L +LH +
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 131
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
C +VHRD+ NIL+ S +ADFG AR+ + ++ + Y APE+
Sbjct: 132 C---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLW-YRAPEVLLQST 187
Query: 526 MTEKYDVYSFGVVTLEVLMGK 546
D++S G + E+ K
Sbjct: 188 YATPVDMWSVGCIFAEMFRRK 208
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 37/209 (17%)
Query: 371 IDSKYCI----GTGAYGSVYKAQ--LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQ 424
I+ +Y I G G +VY A+ + N +V A+K + P E+ ++ F E SQ
Sbjct: 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKV-AIKAIFIPPREKEETLKRFEREVHNSSQ 67
Query: 425 MERGSLFRILHNDAE------------------------AVELDWAKRVNIVKAMAHALA 460
+ ++ ++ D E + +D A +N + +
Sbjct: 68 LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTA--INFTNQILDGIK 125
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQT-LLAGSYGYIAPE 519
+ H +VHRDI NIL++S + DFG A+ L S QT + G+ Y +PE
Sbjct: 126 HAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE 182
Query: 520 LAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
A E D+YS G+V E+L+G+ P
Sbjct: 183 QAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 51/260 (19%)
Query: 377 IGTGAYGSVYKAQ-LPNGRVFALKKL----NSPETEEL-----------------AFIRS 414
+G GAYG V K + +P+G++ A+K++ NS E + L F +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 415 FRNEAQVLSQMER-----GSLFRILHNDAEAVELDWAKR--VNIVKAMAHALAYLHHDCS 467
E V ME ++ + + + + D + V+IVKA+ H + L
Sbjct: 75 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL----- 129
Query: 468 PSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMT 527
SV+HRD+ +N+L+N+ + + DFG + L D + + AG Y+APE +
Sbjct: 130 -SVIHRDVKPSNVLINALGQVKMCDFGISGYL-VDDVAKDIDAGCKPYMAPERINPELNQ 187
Query: 528 EKY----DVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPP-PVDRKVI 582
+ Y D++S G+ +E+ + + P D T P L V+++ P P D+
Sbjct: 188 KGYSVKSDIWSLGITMIELAILRFPYDSWGT------PFQQLKQVVEEPSPQLPADKFSA 241
Query: 583 QDILLVSTISFACLQSNPKS 602
+ + S CL+ N K
Sbjct: 242 EFVDFTSQ----CLKKNSKE 257
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 26 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 84
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 145 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 198
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + IG+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 25 VPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 83
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 144 KYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 197
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 111/255 (43%), Gaps = 51/255 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--EELAFIRSFRNEA-----QVLSQ- 424
+G G +G V+ A+K L SPE +E ++ R+E V+S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
M +GSL L + L + V++ +A +AY+ + VHRD+
Sbjct: 86 PIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERM---NYVHRDLR 141
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL+ L VADFG ARL+ + + T G+ + APE A T K DV+
Sbjct: 142 AANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 534 SFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ-----RLP-PPVDRKVIQDILL 587
SFG++ E+ +T P ++ +VLDQ R+P PP + + D++
Sbjct: 200 SFGILLTEL----------TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 588 VSTISFACLQSNPKS 602
C + +P+
Sbjct: 250 ------QCWRKDPEE 258
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 39/210 (18%)
Query: 367 TPRKIDSKYCIGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLS 423
P+++ +G+GAYGSV Y A+L A+KKL+ P + R++R E ++L
Sbjct: 26 VPQRLQGLRPVGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYR-ELRLLK 82
Query: 424 QMERGSLFRILHNDAEAVELDWAKRV------------NIVKAMA--------------H 457
++ ++ +L A ++ V NIVK+ A
Sbjct: 83 HLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLR 142
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIA 517
L Y+H S ++HRD+ +N+ +N E + DFG AR AD +A + Y A
Sbjct: 143 GLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYVATRW-YRA 196
Query: 518 PELAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
PE+ M + D++S G + E+L GK
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 32 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHM 90
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 151 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 204
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 110/255 (43%), Gaps = 51/255 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--EELAFIRSFRNEA-----QVLSQ- 424
+G G +G V+ A+K L SPE +E ++ R+E V+S+
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 78
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
M +GSL L + L + V++ +A +AY+ + VHRD+
Sbjct: 79 PIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERM---NYVHRDLR 134
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL+ L VADFG ARL+ + + T G+ + APE A T K DV+
Sbjct: 135 AANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 192
Query: 534 SFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ-----RLP-PPVDRKVIQDILL 587
SFG++ E+ +T P ++ +VLDQ R+P PP + + D++
Sbjct: 193 SFGILLTEL----------TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 242
Query: 588 VSTISFACLQSNPKS 602
C + P+
Sbjct: 243 ------QCWRKEPEE 251
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 25 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 83
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 144 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 197
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKA--------------MAHAL 459
+ ++ +L ND V L A NIVK + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGXVATRW-YRAPE 192
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 111/255 (43%), Gaps = 51/255 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--EELAFIRSFRNEA-----QVLSQ- 424
+G G +G V+ A+K L SPE +E ++ R+E V+S+
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 74
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
M +GSL L + L + V++ +A +AY+ + VHRD+
Sbjct: 75 PIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERM---NYVHRDLR 130
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL+ L VADFG ARL+ + + T G+ + APE A T K DV+
Sbjct: 131 AANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 188
Query: 534 SFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ-----RLP-PPVDRKVIQDILL 587
SFG++ E+ +T P ++ +VLDQ R+P PP + + D++
Sbjct: 189 SFGILLTEL----------TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 238
Query: 588 VSTISFACLQSNPKS 602
C + +P+
Sbjct: 239 ------QCWRKDPEE 247
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 18 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 76
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 77 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 136
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 137 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 190
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 111/255 (43%), Gaps = 51/255 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--EELAFIRSFRNEA-----QVLSQ- 424
+G G +G V+ A+K L SPE +E ++ R+E V+S+
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 76
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
M +GSL L + L + V++ +A +AY+ + VHRD+
Sbjct: 77 PIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERM---NYVHRDLR 132
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL+ L VADFG ARL+ + + T G+ + APE A T K DV+
Sbjct: 133 AANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 534 SFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ-----RLP-PPVDRKVIQDILL 587
SFG++ E+ +T P ++ +VLDQ R+P PP + + D++
Sbjct: 191 SFGILLTEL----------TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 240
Query: 588 VSTISFACLQSNPKS 602
C + +P+
Sbjct: 241 ------QCWRKDPEE 249
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRILHNDAEAVELDWAKRV------------NIVKAMA--------------HAL 459
+ ++ +L A L+ V NIVK L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 192
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 74
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKA--------------MAHAL 459
+ ++ +L ND V L A NIVK + L
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 135 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 188
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 17 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 75
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKA--------------MAHAL 459
+ ++ +L ND V L A NIVK + L
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 136 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 189
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 111/256 (43%), Gaps = 53/256 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--EELAFIRSFRNEA-----QVLSQ- 424
+G G +G V+ A+K L SPE +E ++ R+E V+S+
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 252
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
M +GSL L + L + V++ +A +AY+ + VHRD+
Sbjct: 253 PIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 308
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL+ L VADFG RL+ + + T G+ + APE A T K DV+
Sbjct: 309 AANILVGENLVCKVADFGLGRLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 366
Query: 534 SFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQ-----RLP-PPVDRKVIQDIL 586
SFG++ E+ G+ P P ++ +VLDQ R+P PP + + D++
Sbjct: 367 SFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPECPESLHDLM 415
Query: 587 LVSTISFACLQSNPKS 602
C + +P+
Sbjct: 416 C------QCWRKDPEE 425
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 111/255 (43%), Gaps = 51/255 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--EELAFIRSFRNEA-----QVLSQ- 424
+G G +G V+ A+K L SPE +E ++ R+E V+S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEE 85
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
M +GSL L + L + V++ +A +AY+ + VHRD+
Sbjct: 86 PIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERM---NYVHRDLR 141
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL+ L VADFG ARL+ + + T G+ + APE A T K DV+
Sbjct: 142 AANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 534 SFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ-----RLP-PPVDRKVIQDILL 587
SFG++ E+ +T P ++ +VLDQ R+P PP + + D++
Sbjct: 200 SFGILLTEL----------TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 588 VSTISFACLQSNPKS 602
C + +P+
Sbjct: 250 ------QCWRKDPEE 258
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRILHNDAEAVELDWAKRV------------NIVKAMA--------------HAL 459
+ ++ +L A L+ V NIVK L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 192
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 40 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 98
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 159 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 212
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 108/255 (42%), Gaps = 51/255 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--EELAFIRSFRNEAQV--------- 421
+G G +G V+ A+K L SPE +E ++ R+E V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 422 -----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
+ M +G L L + L + V++ +A +AY+ + VHRD+
Sbjct: 86 PIYIVMEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERM---NYVHRDLR 141
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL+ L VADFG ARL+ + + T G+ + APE A T K DV+
Sbjct: 142 AANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 534 SFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ-----RLP-PPVDRKVIQDILL 587
SFG++ E+ +T P ++ +VLDQ R+P PP + + D++
Sbjct: 200 SFGILLTEL----------TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 588 VSTISFACLQSNPKS 602
C + +P+
Sbjct: 250 ------QCWRKDPEE 258
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKA--------------MAHAL 459
+ ++ +L ND V L A NIVK + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 192
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 43 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 101
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 161
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 162 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 215
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 39/210 (18%)
Query: 367 TPRKIDSKYCIGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLS 423
P+++ +G+GAYGSV Y A+L A+KKL+ P + R++R E ++L
Sbjct: 26 VPQRLQGLRPVGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYR-ELRLLK 82
Query: 424 QMERGSLFRILHNDAEAVELDWAKRV------------NIVKAMA--------------H 457
++ ++ +L A ++ V NIVK A
Sbjct: 83 HLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR 142
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIA 517
L Y+H S ++HRD+ +N+ +N E + DFG AR AD +A + Y A
Sbjct: 143 GLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYVATRW-YRA 196
Query: 518 PELAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
PE+ M + D++S G + E+L GK
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 27/193 (13%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERG---SLFRI 433
+G G YG VYKA+ GR+ ALK++ + E+ + E +L ++ SL +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRL-DAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 434 LHNDA------EAVELDWAKRVNIVKA----------MAHALAYLHHDCSPSVVHRDISS 477
+H++ E +E D K ++ K + L + H ++HRD+
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKP 147
Query: 478 NNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKY----DVY 533
N+L+NS +ADFG AR + T + Y AP++ ++ ++KY D++
Sbjct: 148 QNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDV---LMGSKKYSTSVDIW 204
Query: 534 SFGVVTLEVLMGK 546
S G + E++ GK
Sbjct: 205 SIGCIFAEMITGK 217
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 39 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 97
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 98 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 157
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 158 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 211
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 113/225 (50%), Gaps = 38/225 (16%)
Query: 154 LSKLQLLDLSSNRLR-----GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSL 208
L+ L L+LSSN + LT+L +S S N + L P + NL L LD+ N
Sbjct: 128 LTNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNK- 184
Query: 209 IGPIPLTLSRLTSLKILILAQNQLSGLP------------------QEIG---NLKNLML 247
+ I + L++LT+L+ LI NQ+S + ++IG +L NL
Sbjct: 185 VSDISV-LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTD 243
Query: 248 LDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKI 307
LD+ NN I P L + L+ L L NQ ++ P L LT L +L+L+ N+L
Sbjct: 244 LDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDIS 299
Query: 308 PSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLS 352
P I+++++LT+L L NNI P ++ L++L L S NK+S
Sbjct: 300 P--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKVS 340
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 99/190 (52%), Gaps = 13/190 (6%)
Query: 169 GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILA 228
LTNL ++L N + + P + NL NL L++ N+ I I LS LTSL+ L +
Sbjct: 104 ANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNT-ISDIS-ALSGLTSLQQLSFS 159
Query: 229 QNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELT 288
NQ++ L + + NL L LD+ +N + S L ++L L + NQ + P L
Sbjct: 160 SNQVTDL-KPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LG 214
Query: 289 RLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSG 348
LT L L L+ N+L K +AS+ +LT LDL+NN I P ++ L++L L L
Sbjct: 215 ILTNLDELSLNGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGA 270
Query: 349 NKLSGRVPYS 358
N++S P +
Sbjct: 271 NQISNISPLA 280
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 192
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 192
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 32 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 90
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 151 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 204
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 31 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 89
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 90 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 149
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 150 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 203
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 22 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 80
Query: 426 ERGSLFRILHNDAEAVELDWAKRV------------NIVKAMA--------------HAL 459
+ ++ +L A L+ V NIVK L
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 141 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 194
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 32 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 90
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 151 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 204
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 115/237 (48%), Gaps = 48/237 (20%)
Query: 124 NFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLR-----GRLTNLNYMS 178
+ S L SL+ L++ + T P ++ L+ L+ LD+SSN++ +LTNL +
Sbjct: 148 DISALSGLTSLQQLSFGNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLI 205
Query: 179 LSRNMLGGLLPQEIGNLKNLIELDVGDNSL--IGPIPLTLSRLTSLKILILAQNQLSGLP 236
+ N + + P +G L NL EL + N L IG TL+ LT+L L LA NQ+S L
Sbjct: 206 ATNNQISDITP--LGILTNLDELSLNGNQLKDIG----TLASLTNLTDLDLANNQISNLA 259
Query: 237 QEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHL 296
G + L+ L L NQ ++ P L LT L +L
Sbjct: 260 PLSG-------------------------LTKLTELKLGANQISNISP--LAGLTALTNL 292
Query: 297 DLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIP-GEITKLSRLDYLNLSGNKLS 352
+L+ N+L P I+++++LT+L L NNI P +TKL RL + N NK+S
Sbjct: 293 ELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN---NKVS 344
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 14/190 (7%)
Query: 169 GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILA 228
LTNL ++L N + + P + NL NL L++ N+ I I LS LTSL+ L
Sbjct: 109 ANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNT-ISDIS-ALSGLTSLQQLSFG 164
Query: 229 QNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELT 288
NQ++ L + + NL L LD+ +N + S L ++L L + NQ + P L
Sbjct: 165 -NQVTDL-KPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LG 218
Query: 289 RLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSG 348
LT L L L+ N+L K +AS+ +LT LDL+NN I P ++ L++L L L
Sbjct: 219 ILTNLDELSLNGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGA 274
Query: 349 NKLSGRVPYS 358
N++S P +
Sbjct: 275 NQISNISPLA 284
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 17 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 75
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 136 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 189
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 192
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 192
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 426 ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILL--- 482
E G LF + N + E D A NI+K + + YLH ++VHRDI NILL
Sbjct: 129 EGGELFEQIINRHKFDECDAA---NIMKQILSGICYLH---KHNIVHRDIKPENILLENK 182
Query: 483 NSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
NS L + DFG + D + L +Y YIAPE+ EK DV+S GV+ +
Sbjct: 183 NSLLNIKIVDFGLSSFFSKDYKLRDRLGTAY-YIAPEVL-KKKYNEKCDVWSCGVIMYIL 240
Query: 543 LMGKHP 548
L G P
Sbjct: 241 LCGYPP 246
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 26 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 84
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 145 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 198
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 192
Query: 520 LAY-TMVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 22 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 80
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 141 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 194
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 43 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 101
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 161
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 162 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGYVATRW-YRAPE 215
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 27/193 (13%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERG---SLFRI 433
+G G YG VYKA+ GR+ ALK++ + E+ + E +L ++ SL +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRL-DAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 434 LHNDA------EAVELDWAKRVNIVKA----------MAHALAYLHHDCSPSVVHRDISS 477
+H++ E +E D K ++ K + L + H ++HRD+
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKP 147
Query: 478 NNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKY----DVY 533
N+L+NS +ADFG AR + T + Y AP++ ++ ++KY D++
Sbjct: 148 QNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDV---LMGSKKYSTSVDIW 204
Query: 534 SFGVVTLEVLMGK 546
S G + E++ GK
Sbjct: 205 SIGCIFAEMITGK 217
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 25 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 83
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 144 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 197
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 19 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 77
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 78 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 137
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 138 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 191
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 192 IMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 85
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 146 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 199
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 25 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 83
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 144 KYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 197
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 115/237 (48%), Gaps = 48/237 (20%)
Query: 124 NFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLR-----GRLTNLNYMS 178
+ S L SL+ L++ + T P ++ L+ L+ LD+SSN++ +LTNL +
Sbjct: 147 DISALSGLTSLQQLSFGNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLI 204
Query: 179 LSRNMLGGLLPQEIGNLKNLIELDVGDNSL--IGPIPLTLSRLTSLKILILAQNQLSGLP 236
+ N + + P +G L NL EL + N L IG TL+ LT+L L LA NQ+S L
Sbjct: 205 ATNNQISDITP--LGILTNLDELSLNGNQLKDIG----TLASLTNLTDLDLANNQISNLA 258
Query: 237 QEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHL 296
G + L+ L L NQ ++ P L LT L +L
Sbjct: 259 PLSG-------------------------LTKLTELKLGANQISNISP--LAGLTALTNL 291
Query: 297 DLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIP-GEITKLSRLDYLNLSGNKLS 352
+L+ N+L P I+++++LT+L L NNI P +TKL RL + N NK+S
Sbjct: 292 ELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFAN---NKVS 343
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 14/190 (7%)
Query: 169 GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILA 228
LTNL ++L N + + P + NL NL L++ N+ I I LS LTSL+ L
Sbjct: 108 ANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNT-ISDIS-ALSGLTSLQQLSFG 163
Query: 229 QNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELT 288
NQ++ L + + NL L LD+ +N + S L ++L L + NQ + P L
Sbjct: 164 -NQVTDL-KPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LG 217
Query: 289 RLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSG 348
LT L L L+ N+L K +AS+ +LT LDL+NN I P ++ L++L L L
Sbjct: 218 ILTNLDELSLNGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGA 273
Query: 349 NKLSGRVPYS 358
N++S P +
Sbjct: 274 NQISNISPLA 283
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 31 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 89
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 90 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 149
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 150 KYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 203
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 22 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 80
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 141 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 194
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 113/226 (50%), Gaps = 40/226 (17%)
Query: 154 LSKLQLLDLSSNRLR-----GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSL 208
L+ L L+LSSN + LT+L +S S N + L P + NL L LD+ N
Sbjct: 128 LTNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNK- 184
Query: 209 IGPIPLTLSRLTSLKILILAQNQLSGLP------------------QEIG---NLKNLML 247
+ I + L++LT+L+ LI NQ+S + ++IG +L NL
Sbjct: 185 VSDISV-LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTD 243
Query: 248 LDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKI 307
LD+ NN I P L + L+ L L NQ ++ P L LT L +L+L+ N+L
Sbjct: 244 LDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDIS 299
Query: 308 PSQIASMEDLTWLDLSNNNIKGSIP-GEITKLSRLDYLNLSGNKLS 352
P I+++++LT+L L NNI P +TKL RL + N NK+S
Sbjct: 300 P--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN---NKVS 340
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 99/190 (52%), Gaps = 13/190 (6%)
Query: 169 GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILA 228
LTNL ++L N + + P + NL NL L++ N+ I I LS LTSL+ L +
Sbjct: 104 ANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNT-ISDIS-ALSGLTSLQQLSFS 159
Query: 229 QNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELT 288
NQ++ L + + NL L LD+ +N + S L ++L L + NQ + P L
Sbjct: 160 SNQVTDL-KPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LG 214
Query: 289 RLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSG 348
LT L L L+ N+L K +AS+ +LT LDL+NN I P ++ L++L L L
Sbjct: 215 ILTNLDELSLNGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGA 270
Query: 349 NKLSGRVPYS 358
N++S P +
Sbjct: 271 NQISNISPLA 280
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 110/255 (43%), Gaps = 51/255 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--EELAFIRSFRNEA-----QVLSQ- 424
+G G +G V+ A+K L SPE +E ++ R+E V+S+
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
M +GSL L + L + V++ +A +AY+ + VHRD+
Sbjct: 83 PIYIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVERM---NYVHRDLR 138
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL+ L VADFG ARL+ + + T G+ + APE A T K DV+
Sbjct: 139 AANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 534 SFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ-----RLP-PPVDRKVIQDILL 587
SFG++ E+ +T P ++ +VLDQ R+P PP + + D++
Sbjct: 197 SFGILLTEL----------TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 246
Query: 588 VSTISFACLQSNPKS 602
C + P+
Sbjct: 247 ------QCWRKEPEE 255
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 46/229 (20%)
Query: 377 IGTGAYG-SVYKAQLPNGRVFALKKLN-----SPETEE----------------LAFIRS 414
IG G++G ++ +GR + +K++N S E EE + + S
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 415 FRNEAQ---VLSQMERGSLFRILHNDA-----EAVELDWAKRVNIVKAMAHALAYLHHDC 466
F V+ E G LF+ ++ E LDW V I A+ H HD
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWF--VQICLALKHV-----HD- 143
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVM 526
++HRDI S NI L + DFG AR+L++ G+ Y++PE+
Sbjct: 144 -RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPY 202
Query: 527 TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPP 575
K D+++ G V E+ KH + S K +++ ++ PP
Sbjct: 203 NNKSDIWALGCVLYELCTLKHAFEAGSM-------KNLVLKIISGSFPP 244
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 192
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 26 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 84
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 145 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 198
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 114/236 (48%), Gaps = 46/236 (19%)
Query: 124 NFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLR-----GRLTNLNYMS 178
+ S L SL+ L + + T P ++ L+ L+ LD+SSN++ +LTNL +
Sbjct: 143 DISALSGLTSLQQLNFGNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLI 200
Query: 179 LSRNMLGGLLPQEIGNLKNLIELDVGDNSL--IGPIPLTLSRLTSLKILILAQNQLSGLP 236
+ N + + P +G L NL EL + N L IG TL+ LT+L L LA NQ+S L
Sbjct: 201 ATNNQISDITP--LGILTNLDELSLNGNQLKDIG----TLASLTNLTDLDLANNQISNLA 254
Query: 237 QEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHL 296
G + L+ L L NQ ++ P L LT L +L
Sbjct: 255 PLSG-------------------------LTKLTELKLGANQISNISP--LAGLTALTNL 287
Query: 297 DLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLS 352
+L+ N+L P I+++++LT+L L NNI P ++ L++L L S NK+S
Sbjct: 288 ELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKVS 339
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 14/190 (7%)
Query: 169 GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILA 228
LTNL ++L N + + P + NL NL L++ N+ I I LS LTSL+ L
Sbjct: 104 ANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNT-ISDIS-ALSGLTSLQQLNFG 159
Query: 229 QNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELT 288
NQ++ L + + NL L LD+ +N + S L ++L L + NQ + P L
Sbjct: 160 -NQVTDL-KPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LG 213
Query: 289 RLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSG 348
LT L L L+ N+L K +AS+ +LT LDL+NN I P ++ L++L L L
Sbjct: 214 ILTNLDELSLNGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGA 269
Query: 349 NKLSGRVPYS 358
N++S P +
Sbjct: 270 NQISNISPLA 279
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 110/255 (43%), Gaps = 51/255 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--EELAFIRSFRNEA-----QVLSQ- 424
+G G +G V+ A+K L SPE +E ++ R+E V+S+
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
M +GSL L + L + V++ +A +AY+ + VHRD+
Sbjct: 83 PIYIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVERM---NYVHRDLR 138
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL+ L VADFG ARL+ + + T G+ + APE A T K DV+
Sbjct: 139 AANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 534 SFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ-----RLP-PPVDRKVIQDILL 587
SFG++ E+ +T P ++ +VLDQ R+P PP + + D++
Sbjct: 197 SFGILLTEL----------TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 246
Query: 588 VSTISFACLQSNPKS 602
C + P+
Sbjct: 247 ------QCWRKEPEE 255
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 192
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 43/211 (20%)
Query: 368 PRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME 426
P + + +G+GAYGSV + + +G A+KKL+ P + R++R E ++L M+
Sbjct: 50 PERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK 108
Query: 427 RGSLFRILHNDAEAVELDWAKRV------------NIVKAMA--------------HALA 460
++ +L A L+ V NIVK L
Sbjct: 109 HENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 168
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE- 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 169 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW-YRAPEI 222
Query: 520 ----LAYTMVMTEKYDVYSFGVVTLEVLMGK 546
+ Y M + D++S G + E+L G+
Sbjct: 223 MLNWMHYNMTV----DIWSVGCIMAELLTGR 249
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 32/199 (16%)
Query: 375 YCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFR- 432
Y IGTG+YG K + +G++ K+L+ E A + +E +L +++ ++ R
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLLRELKHPNIVRY 70
Query: 433 ---------------------------ILHNDAEAVELDWAKRVNIVKAMAHALAYLHH- 464
I E LD + ++ + AL H
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 465 -DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYT 523
D +V+HRD+ N+ L+ K + DFG AR+L+ D G+ Y++PE
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNR 190
Query: 524 MVMTEKYDVYSFGVVTLEV 542
M EK D++S G + E+
Sbjct: 191 MSYNEKSDIWSLGCLLYEL 209
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 22 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 80
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 141 KYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 194
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 26 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 84
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR H D +A + Y APE
Sbjct: 145 KYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYVATRW-YRAPE 198
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 110/255 (43%), Gaps = 51/255 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--EELAFIRSFRNEA-----QVLSQ- 424
+G G +G V+ A+K L SPE +E ++ R+E V+S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
M +G L L + L + V++ +A +AY+ + VHRD+
Sbjct: 86 PIYIVTEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERM---NYVHRDLR 141
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL+ L VADFG ARL+ + + T G+ + APE A T K DV+
Sbjct: 142 AANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 534 SFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ-----RLP-PPVDRKVIQDILL 587
SFG++ E+ +T P ++ +VLDQ R+P PP + + D++
Sbjct: 200 SFGILLTEL----------TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 588 VSTISFACLQSNPKS 602
C + +P+
Sbjct: 250 ------QCWRKDPEE 258
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 114/237 (48%), Gaps = 48/237 (20%)
Query: 124 NFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLR-----GRLTNLNYMS 178
+ S L SL+ L + + T P ++ L+ L+ LD+SSN++ +LTNL +
Sbjct: 143 DISALSGLTSLQQLNFGNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLI 200
Query: 179 LSRNMLGGLLPQEIGNLKNLIELDVGDNSL--IGPIPLTLSRLTSLKILILAQNQLSGLP 236
+ N + + P +G L NL EL + N L IG TL+ LT+L L LA NQ+S L
Sbjct: 201 ATNNQISDITP--LGILTNLDELSLNGNQLKDIG----TLASLTNLTDLDLANNQISNLA 254
Query: 237 QEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHL 296
G + L+ L L NQ ++ P L LT L +L
Sbjct: 255 PLSG-------------------------LTKLTELKLGANQISNISP--LAGLTALTNL 287
Query: 297 DLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIP-GEITKLSRLDYLNLSGNKLS 352
+L+ N+L P I+++++LT+L L NNI P +TKL RL + N NK+S
Sbjct: 288 ELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN---NKVS 339
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 14/190 (7%)
Query: 169 GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILA 228
LTNL ++L N + + P + NL NL L++ N+ I I LS LTSL+ L
Sbjct: 104 ANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNT-ISDIS-ALSGLTSLQQLNFG 159
Query: 229 QNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELT 288
NQ++ L + + NL L LD+ +N + S L ++L L + NQ + P L
Sbjct: 160 -NQVTDL-KPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LG 213
Query: 289 RLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSG 348
LT L L L+ N+L K +AS+ +LT LDL+NN I P ++ L++L L L
Sbjct: 214 ILTNLDELSLNGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGA 269
Query: 349 NKLSGRVPYS 358
N++S P +
Sbjct: 270 NQISNISPLA 279
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
++K + L YLH S +HRDI + N+LL+ + + +ADFG A L +
Sbjct: 123 ATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 179
Query: 509 LAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPR-DLH 552
G+ ++APE+ K D++S G+ +E+ G+ P D+H
Sbjct: 180 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMH 224
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 41/202 (20%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIR--------------------- 413
+GTG++G V+ + NGR +A+K L L +
Sbjct: 13 TLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMW 72
Query: 414 -SFRNEAQV---LSQMERGSLFRILHNDAE---AVELDWAKRVNIVKAMAHALAYLHHDC 466
+F++ Q+ + +E G LF +L V +A V + AL YLH
Sbjct: 73 GTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCL------ALEYLH--- 123
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVM 526
S +++RD+ NILL+ + DFG A+ + L G+ YIAPE+ T
Sbjct: 124 SKDIIYRDLKPENILLDKNGHIKITDFGFAKYV---PDVTYXLCGTPDYIAPEVVSTKPY 180
Query: 527 TEKYDVYSFGVVTLEVLMGKHP 548
+ D +SFG++ E+L G P
Sbjct: 181 NKSIDWWSFGILIYEMLAGYTP 202
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + D+G AR H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLAR--HTDDEMTGYVATRW-YRAPE 192
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 33/213 (15%)
Query: 366 PTPRKI---DSKY--CIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEA 419
P PRK D K+ +G G++ +V A +L R +A+K L + + E
Sbjct: 2 PQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER 61
Query: 420 QVLSQMERG---SLFRILHNDAE-AVELDWAKRVNIVK------------------AMAH 457
V+S+++ L+ +D + L +AK ++K +
Sbjct: 62 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS 121
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNQTLLAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S + G+ Y
Sbjct: 122 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL + D+++ G + +++ G P
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 120/243 (49%), Gaps = 23/243 (9%)
Query: 116 FNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLR-----GR 170
FN +++ ++ NL +L L I S +S L+ LQ L+ SSN++
Sbjct: 115 FNNQITDID--PLKNLTNLNRLELSSNTISDI-SALSGLTSLQQLNFSSNQVTDLKPLAN 171
Query: 171 LTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQN 230
LT L + +S N + + + L NL L +N + PL + LT+L L L N
Sbjct: 172 LTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGN 227
Query: 231 QLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRL 290
QL + + +L NL LD+ NN I P L + L+ L L NQ ++ P L L
Sbjct: 228 QLKDI-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGL 282
Query: 291 TQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIP-GEITKLSRLDYLNLSGN 349
T L +L+L+ N+L P I+++++LT+L L NNI P +TKL RL + N N
Sbjct: 283 TALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN---N 337
Query: 350 KLS 352
K+S
Sbjct: 338 KVS 340
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 99/190 (52%), Gaps = 13/190 (6%)
Query: 169 GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILA 228
LTNL ++L N + + P + NL NL L++ N+ I I LS LTSL+ L +
Sbjct: 104 ANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNT-ISDIS-ALSGLTSLQQLNFS 159
Query: 229 QNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELT 288
NQ++ L + + NL L LD+ +N + S L ++L L + NQ + P L
Sbjct: 160 SNQVTDL-KPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LG 214
Query: 289 RLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSG 348
LT L L L+ N+L K +AS+ +LT LDL+NN I P ++ L++L L L
Sbjct: 215 ILTNLDELSLNGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGA 270
Query: 349 NKLSGRVPYS 358
N++S P +
Sbjct: 271 NQISNISPLA 280
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 55/218 (25%)
Query: 376 CIGTGAYGSVYKAQLP-NGRVFALKKLNSPET---------------------------- 406
+G GA+G V KA+ + R +A+KK+ E
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 407 EELAFIR---SFRNEAQVLSQME---RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALA 460
E F++ + + ++ + QME G+L+ ++H++ + D R + + + AL+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR--LFRQILEALS 130
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH--------------ADSSNQ 506
Y+H S ++HRD+ NI ++ + DFG A+ +H S N
Sbjct: 131 YIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 507 TLLAGSYGYIAPE-LAYTMVMTEKYDVYSFGVVTLEVL 543
T G+ Y+A E L T EK D+YS G++ E++
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 398 LKKLNSPETEELAFIRSFRNEAQV---LSQMERGSLFRILHNDAEAVELDWAKRVNIVKA 454
L + NSP + F +F ++ ++ + M+ GSL ++L E K V+I A
Sbjct: 58 LHECNSPYI--VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-VSI--A 112
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG 514
+ L YL ++HRD+ +NIL+NS+ E + DFG + L +N G+
Sbjct: 113 VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRS 168
Query: 515 YIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRL- 573
Y++PE + + D++S G+ +E+ +G++P S P + + ++LD +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSR-PPMAIFELLDYIVN 227
Query: 574 -PPPVDRKVIQDILLVSTISFA--CLQSNP 600
PPP K+ + + F CL NP
Sbjct: 228 EPPP---KLPSGVFSLEFQDFVNKCLIKNP 254
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 87/208 (41%), Gaps = 45/208 (21%)
Query: 377 IGTGAYGSVYKAQLPNG-RVFALKKLNSPETEELAFIRSFRNEAQVLSQMER-------- 427
IG GA+G V +L N +VFA+K LN E + A FR E VL +
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY 141
Query: 428 -----------------GSLFRILHNDAEAVELDWAK----RVNIVKAMAHALAYLHHDC 466
G L +L + + + A+ + I H L Y
Sbjct: 142 AFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY----- 196
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLA-GSYGYIAPELAYTMV 525
VHRDI +NIL++ +ADFG+ L D + Q+ +A G+ YI+PE+ M
Sbjct: 197 ----VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAME 252
Query: 526 MTE-----KYDVYSFGVVTLEVLMGKHP 548
+ + D +S GV E+L G+ P
Sbjct: 253 GGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 33/213 (15%)
Query: 366 PTPRKI---DSKY--CIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEA 419
P PRK D K+ +G G++ +V A +L R +A+K L + + E
Sbjct: 1 PQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRER 60
Query: 420 QVLSQMERG---SLFRILHNDAE-AVELDWAKRVNIVK------------------AMAH 457
V+S+++ L+ +D + L +AK ++K +
Sbjct: 61 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS 120
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNQTLLAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S + G+ Y
Sbjct: 121 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL + D+++ G + +++ G P
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 49/220 (22%)
Query: 369 RKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLN------SPETEELAFIR-SFRNEAQ 420
+K D K IG G V + G FA+K + SPE +L +R + R E
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPE--QLEEVREATRRETH 151
Query: 421 VLSQ--------------------------MERGSLFRILHNDAEAVELDWAKRVNIVKA 454
+L Q M +G LF L E V L + +I+++
Sbjct: 152 ILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL---TEKVALSEKETRSIMRS 208
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG 514
+ A+++LH + ++VHRD+ NILL+ ++ ++DFG + L + L G+ G
Sbjct: 209 LLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE-LCGTPG 264
Query: 515 YIAPE-LAYTMVMT-----EKYDVYSFGVVTLEVLMGKHP 548
Y+APE L +M T ++ D+++ GV+ +L G P
Sbjct: 265 YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
I++ + L YLH S +HRDI + N+LL+ + + +ADFG A L +
Sbjct: 119 ATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX 175
Query: 509 LAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPR-DLH 552
G+ ++APE+ K D++S G+ +E+ G+ P DLH
Sbjct: 176 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLH 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK+ L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG R H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCR--HTDDEMTGYVATRW-YRAPE 192
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 51/260 (19%)
Query: 377 IGTGAYGSVYKAQ-LPNGRVFALKKL----NSPETEEL-----------------AFIRS 414
+G GAYG V K + +P+G++ A+K++ NS E + L F +
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 415 FRNEAQV-----LSQMERGSLFRILHNDAEAVELDWAKR--VNIVKAMAHALAYLHHDCS 467
E V L ++ + + + + D + V+IVKA+ H + L
Sbjct: 102 LFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL----- 156
Query: 468 PSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMT 527
SV+HRD+ +N+L+N+ + DFG + L D + + AG Y APE +
Sbjct: 157 -SVIHRDVKPSNVLINALGQVKXCDFGISGYL-VDDVAKDIDAGCKPYXAPERINPELNQ 214
Query: 528 EKY----DVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPP-PVDRKVI 582
+ Y D++S G+ +E+ + + P D T P L V+++ P P D+
Sbjct: 215 KGYSVKSDIWSLGITXIELAILRFPYDSWGT------PFQQLKQVVEEPSPQLPADKFSA 268
Query: 583 QDILLVSTISFACLQSNPKS 602
+ + S CL+ N K
Sbjct: 269 EFVDFTSQ----CLKKNSKE 284
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 100/205 (48%), Gaps = 31/205 (15%)
Query: 368 PRK-IDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETE-------ELAFIRSFRNE 418
PR +D+ IG G+ G V A + +G++ A+KK++ + + E+ +R +++E
Sbjct: 22 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE 81
Query: 419 AQV---------------LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
V + +E G+L I+ + ++ + + A+ AL+ LH
Sbjct: 82 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLH 137
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYT 523
+ V+HRDI S++ILL ++DFG + + + L G+ ++APEL
Sbjct: 138 ---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR 194
Query: 524 MVMTEKYDVYSFGVVTLEVLMGKHP 548
+ + D++S G++ +E++ G+ P
Sbjct: 195 LPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 100/205 (48%), Gaps = 31/205 (15%)
Query: 368 PRK-IDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETE-------ELAFIRSFRNE 418
PR +D+ IG G+ G V A + +G++ A+KK++ + + E+ +R +++E
Sbjct: 18 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE 77
Query: 419 AQV---------------LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
V + +E G+L I+ + ++ + + A+ AL+ LH
Sbjct: 78 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLH 133
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYT 523
+ V+HRDI S++ILL ++DFG + + + L G+ ++APEL
Sbjct: 134 ---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR 190
Query: 524 MVMTEKYDVYSFGVVTLEVLMGKHP 548
+ + D++S G++ +E++ G+ P
Sbjct: 191 LPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 98/201 (48%), Gaps = 30/201 (14%)
Query: 371 IDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETE-------ELAFIRSFRNEAQV- 421
+D+ IG G+ G V A + +G++ A+KK++ + + E+ +R +++E V
Sbjct: 31 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 422 --------------LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCS 467
+ +E G+L I+ + ++ + + A+ AL+ LH +
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLH---A 143
Query: 468 PSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMT 527
V+HRDI S++ILL ++DFG + + + L G+ ++APEL +
Sbjct: 144 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 203
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
+ D++S G++ +E++ G+ P
Sbjct: 204 PEVDIWSLGIMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 98/201 (48%), Gaps = 30/201 (14%)
Query: 371 IDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETE-------ELAFIRSFRNEAQV- 421
+D+ IG G+ G V A + +G++ A+KK++ + + E+ +R +++E V
Sbjct: 33 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 422 --------------LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCS 467
+ +E G+L I+ + ++ + + A+ AL+ LH +
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLH---A 145
Query: 468 PSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMT 527
V+HRDI S++ILL ++DFG + + + L G+ ++APEL +
Sbjct: 146 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 205
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
+ D++S G++ +E++ G+ P
Sbjct: 206 PEVDIWSLGIMVIEMVDGEPP 226
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 39/215 (18%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPET-------EELAFIRSFRNEAQV-------- 421
+G G +G V+ N A+K L P T EE +++ +++ V
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 422 -------LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRD 474
M +GSL L +D E ++ K ++ +A +AY+ + +HRD
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRD 135
Query: 475 ISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYD 531
+ + N+L++ L +ADFG AR++ + + T G+ + APE T K D
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSD 193
Query: 532 VYSFGVVTLEVL-MGKHPR------DLHSTLSSSY 559
V+SFG++ E++ GK P D+ + LS Y
Sbjct: 194 VWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGY 228
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 90/204 (44%), Gaps = 37/204 (18%)
Query: 377 IGTGAYGSVYKAQLPNG-RVFALKKLNSPETEELAFIRSFRNEAQVLS------------ 423
IG GA+G V ++ N R++A+K LN E + A FR E VL
Sbjct: 82 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 141
Query: 424 --QMER-----------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSV 470
Q E G L +L + + D A+ + M A+ +H
Sbjct: 142 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFY--IGEMVLAIDSIHQ---LHY 196
Query: 471 VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLA-GSYGYIAPELAYTMV-MTE 528
VHRDI +N+LL+ +ADFG+ ++ D + Q+ +A G+ YI+PE+ M
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 529 KY----DVYSFGVVTLEVLMGKHP 548
KY D +S GV E+L G+ P
Sbjct: 257 KYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 377 IGTGAYGSVYKAQLPNG-RVFALKKLNSPETEELAFIRSFRNEAQVLSQME--------- 426
IG GA+G V ++ N R++A+K LN E + A FR E VL +
Sbjct: 98 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 157
Query: 427 ----------------RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSV 470
G L +L + + D A+ + M A+ +H
Sbjct: 158 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFY--IGEMVLAIDSIHQ---LHY 212
Query: 471 VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLA-GSYGYIAPELAYTMV-MTE 528
VHRDI +N+LL+ +ADFG+ ++ D + Q+ +A G+ YI+PE+ M
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 529 KY----DVYSFGVVTLEVLMGKHP 548
KY D +S GV E+L G+ P
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 85
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR + T + Y APE
Sbjct: 146 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYVATRWYRAPE 199
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 397 ALKKLNSPETEELAFIRSFRNEAQV---LSQMERGSLFRILHNDAEAVELDWAKRVNIVK 453
L + NSP + F +F ++ ++ + M+ GSL ++L E K V+I
Sbjct: 76 VLHECNSPYI--VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-VSI-- 130
Query: 454 AMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY 513
A+ L YL ++HRD+ +NIL+NS+ E + DFG + L +N G+
Sbjct: 131 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTR 186
Query: 514 GYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRL 573
Y++PE + + D++S G+ +E+ +G++P S + ++ L+D +
Sbjct: 187 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFE----LLDYIVNEP 242
Query: 574 PPPVDRKVIQDILLVSTISFACLQSNP 600
PP + V L CL NP
Sbjct: 243 PPKLPSGVFS--LEFQDFVNKCLIKNP 267
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DF AR H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEMTGYVATRW-YRAPE 192
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 85
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR + T + Y APE
Sbjct: 146 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYVATRWYRAPE 199
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 85
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + DFG AR + T + Y APE
Sbjct: 146 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYVATRWYRAPE 199
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 113/270 (41%), Gaps = 76/270 (28%)
Query: 376 CIGTGAYGSVYKAQLPNGRV----FALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLF 431
C+G G +G V++A+ +V +A+K++ P ELA + R E + L+++E +
Sbjct: 12 CLGRGGFGVVFEAK---NKVDDCNYAIKRIRLP-NRELAREKVMR-EVKALAKLEHPGIV 66
Query: 432 RILH-----NDAEAVE--------------------LDW-------AKR-----VNIVKA 454
R + N E ++ DW +R ++I
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL----- 509
+A A+ +LH S ++HRD+ +NI V DFG + D QT+L
Sbjct: 127 IAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 510 -------AGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPK 562
G+ Y++PE + + K D++S G++ E+L +P S+ +
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YP------FSTQMERV 234
Query: 563 IMLIDVLDQRLPP------PVDRKVIQDIL 586
L DV + + PP P + ++QD+L
Sbjct: 235 RTLTDVRNLKFPPLFTQKYPCEYVMVQDML 264
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + FG AR H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLAR--HTDDEMTGYVATRW-YRAPE 192
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 92/219 (42%), Gaps = 47/219 (21%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER-------- 427
IG GA+ V ++ G+V+A+K +N + + + FR E VL +R
Sbjct: 69 IGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHF 128
Query: 428 -----------------GSLFRILHNDAEAVELDWAKR--VNIVKAM--AHALAYLHHDC 466
G L +L E + + A+ IV A+ H L Y
Sbjct: 129 AFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGY----- 183
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLA-GSYGYIAPELAYTMV 525
VHRDI +NILL+ +ADFG+ L AD + ++L+A G+ Y++PE+ +
Sbjct: 184 ----VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVG 239
Query: 526 MTE-------KYDVYSFGVVTLEVLMGKHPRDLHSTLSS 557
+ D ++ GV E+ G+ P ST +
Sbjct: 240 GGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET 278
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 30/201 (14%)
Query: 371 IDSKYCIGTGAYGSVYKAQL-PNGRVFALKK--LNSPETEELAF-----IRSFRNEAQV- 421
+D+ IG G+ G V A + +G++ A+KK L + EL F +R +++E V
Sbjct: 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 212
Query: 422 --------------LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCS 467
+ +E G+L I+ + ++ + + A+ AL+ LH +
Sbjct: 213 MYNSYLVGDELWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLH---A 265
Query: 468 PSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMT 527
V+HRDI S++ILL ++DFG + + + L G+ ++APEL +
Sbjct: 266 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 325
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
+ D++S G++ +E++ G+ P
Sbjct: 326 PEVDIWSLGIMVIEMVDGEPP 346
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 98/201 (48%), Gaps = 30/201 (14%)
Query: 371 IDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETE-------ELAFIRSFRNEAQV- 421
+D+ IG G+ G V A + +G++ A+KK++ + + E+ +R +++E V
Sbjct: 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 135
Query: 422 --------------LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCS 467
+ +E G+L I+ + ++ + + A+ AL+ LH +
Sbjct: 136 MYNSYLVGDELWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLH---A 188
Query: 468 PSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMT 527
V+HRDI S++ILL ++DFG + + + L G+ ++APEL +
Sbjct: 189 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 248
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
+ D++S G++ +E++ G+ P
Sbjct: 249 PEVDIWSLGIMVIEMVDGEPP 269
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 39/200 (19%)
Query: 377 IGTGAYGSVYKAQLPNGRV---FALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRI 433
+G+GAYG+V A +GR A+KKL P EL R++R E ++L M ++ +
Sbjct: 33 VGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYR-ELRLLKHMRHENVIGL 89
Query: 434 LHNDAEAVELD-------------------------WAKRVN-IVKAMAHALAYLHHDCS 467
L LD R+ +V M L Y+H +
Sbjct: 90 LDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH---A 146
Query: 468 PSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYT-MVM 526
++HRD+ N+ +N E + DFG AR ADS + + Y APE+ M
Sbjct: 147 AGIIHRDLKPGNLAVNEDCELKILDFGLAR--QADSEMXGXVVTRW-YRAPEVILNWMRY 203
Query: 527 TEKYDVYSFGVVTLEVLMGK 546
T+ D++S G + E++ GK
Sbjct: 204 TQTVDIWSVGCIMAEMITGK 223
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 35/198 (17%)
Query: 377 IGTGAYGSVYK-AQLPNGRVFA----------------------LKKLNSPETEELAFIR 413
+G G G V+K + P+G V A L + NSP + F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI--VGFYG 71
Query: 414 SFRNEAQV---LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSV 470
+F ++ ++ + M+ GSL ++L E K V+I A+ L YL +
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-VSI--AVIKGLTYLRE--KHKI 126
Query: 471 VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKY 530
+HRD+ +NIL+NS+ E + DFG + L +N G+ Y++PE + +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQGTHYSVQS 184
Query: 531 DVYSFGVVTLEVLMGKHP 548
D++S G+ +E+ +G++P
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 35/198 (17%)
Query: 377 IGTGAYGSVYK-AQLPNGRVFA----------------------LKKLNSPETEELAFIR 413
+G G G V+K + P+G V A L + NSP + F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI--VGFYG 71
Query: 414 SFRNEAQV---LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSV 470
+F ++ ++ + M+ GSL ++L E K V+I A+ L YL +
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-VSI--AVIKGLTYLRE--KHKI 126
Query: 471 VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKY 530
+HRD+ +NIL+NS+ E + DFG + L +N G+ Y++PE + +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQGTHYSVQS 184
Query: 531 DVYSFGVVTLEVLMGKHP 548
D++S G+ +E+ +G++P
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 356 PYSNKHLSSMPTPRKIDS---KYCIGTGAYGSVYKAQLPNGRVF----ALKK---LNSPE 405
P NK S+ KI+ +G G++G V+ A+ F ALKK L +
Sbjct: 1 PELNKERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD 60
Query: 406 TE-------------ELAFIR----SFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKR 448
E E F+ +F+ + + ME + ++++ + D ++
Sbjct: 61 VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRA 120
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
+ L +LH S +V+RD+ +NILL+ +ADFG + +
Sbjct: 121 TFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNX 177
Query: 509 LAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
G+ YIAPE+ D +SFGV+ E+L+G+ P
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 35/198 (17%)
Query: 377 IGTGAYGSVYK-AQLPNGRVFA----------------------LKKLNSPETEELAFIR 413
+G G G V+K + P+G V A L + NSP + F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI--VGFYG 71
Query: 414 SFRNEAQV---LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSV 470
+F ++ ++ + M+ GSL ++L E K V+I A+ L YL +
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-VSI--AVIKGLTYLRE--KHKI 126
Query: 471 VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKY 530
+HRD+ +NIL+NS+ E + DFG + L +N G+ Y++PE + +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQGTHYSVQS 184
Query: 531 DVYSFGVVTLEVLMGKHP 548
D++S G+ +E+ +G++P
Sbjct: 185 DIWSMGLSLVEMAVGRYP 202
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 398 LKKLNSPETEELAFIRSFRNEAQV---LSQMERGSLFRILHNDAEAVELDWAKRVNIVKA 454
L + NSP + F +F ++ ++ + M+ GSL ++L E K V+I A
Sbjct: 120 LHECNSPYI--VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-VSI--A 174
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG 514
+ L YL ++HRD+ +NIL+NS+ E + DFG + L +N G+
Sbjct: 175 VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRS 230
Query: 515 YIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y++PE + + D++S G+ +E+ +G++P
Sbjct: 231 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + D G AR H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLAR--HTDDEMTGYVATRW-YRAPE 192
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 398 LKKLNSPETEELAFIRSFRNEAQV---LSQMERGSLFRILHNDAEAVELDWAKRVNIVKA 454
L + NSP + F +F ++ ++ + M+ GSL ++L E K V+I A
Sbjct: 58 LHECNSPYI--VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-VSI--A 112
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG 514
+ L YL ++HRD+ +NIL+NS+ E + DFG + L +N G+
Sbjct: 113 VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRS 168
Query: 515 YIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y++PE + + D++S G+ +E+ +G++P
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 59/283 (20%)
Query: 369 RKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEE------------------LA 410
R I + IG G +G V++ + G A+K +S E L
Sbjct: 29 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 87
Query: 411 FIRSFRNEAQVLSQM-------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
FI + + +Q+ E GSLF L+ VE + + + A LA+LH
Sbjct: 88 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLH 143
Query: 464 HDC-----SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL------LAGS 512
+ P++ HRD+ S NIL+ +AD G A + DS+ T+ G+
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGT 201
Query: 513 YGYIAPEL---AYTMVMTEKY---DVYSFGVVTLEVLMGKHPRDLHSTLSSSY------D 560
Y+APE+ + M E + D+Y+ G+V E+ +H Y D
Sbjct: 202 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 261
Query: 561 PKI--MLIDVLDQRLPP--PVDRKVIQDILLVSTISFACLQSN 599
P + M V +Q+L P P + + + +++ I C +N
Sbjct: 262 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 304
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 59/283 (20%)
Query: 369 RKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEE------------------LA 410
R I + IG G +G V++ + G A+K +S E L
Sbjct: 42 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 100
Query: 411 FIRSFRNEAQVLSQM-------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
FI + + +Q+ E GSLF L+ VE + + + A LA+LH
Sbjct: 101 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLH 156
Query: 464 HDC-----SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL------LAGS 512
+ P++ HRD+ S NIL+ +AD G A + DS+ T+ G+
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGT 214
Query: 513 YGYIAPEL---AYTMVMTEKY---DVYSFGVVTLEVLMGKHPRDLHSTLSSSY------D 560
Y+APE+ + M E + D+Y+ G+V E+ +H Y D
Sbjct: 215 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274
Query: 561 PKI--MLIDVLDQRLPP--PVDRKVIQDILLVSTISFACLQSN 599
P + M V +Q+L P P + + + +++ I C +N
Sbjct: 275 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 317
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 35/198 (17%)
Query: 377 IGTGAYGSVYK-AQLPNGRVFALK----------------------KLNSPETEELAFIR 413
+G G G V+K + P+G V A K + NSP + F
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI--VGFYG 98
Query: 414 SFRNEAQV---LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSV 470
+F ++ ++ + M+ GSL ++L E K V+I A+ L YL +
Sbjct: 99 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-VSI--AVIKGLTYLRE--KHKI 153
Query: 471 VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKY 530
+HRD+ +NIL+NS+ E + DFG + L +N G+ Y++PE + +
Sbjct: 154 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQGTHYSVQS 211
Query: 531 DVYSFGVVTLEVLMGKHP 548
D++S G+ +E+ +G++P
Sbjct: 212 DIWSMGLSLVEMAVGRYP 229
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 377 IGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G GA+G VYKA+ G + A K + + EEL + E ++L+ + + ++L
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL---EDYIVEIEILATCDHPYIVKLLG 75
Query: 435 ---HN---------------DAEAVELDWA---KRVNIV-KAMAHALAYLHHDCSPSVVH 472
H+ DA +ELD ++ +V + M AL +LH S ++H
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIH 132
Query: 473 RDISSNNILLNSKLEAFVADFG-TARLLHADSSNQTLLAGSYGYIAPELAYTMVMTE--- 528
RD+ + N+L+ + + +ADFG +A+ L + + Y ++APE+ M +
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPY-WMAPEVVMCETMKDTPY 191
Query: 529 --KYDVYSFGVVTLEVLMGKHP 548
K D++S G+ +E+ + P
Sbjct: 192 DYKADIWSLGITLIEMAQIEPP 213
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + D G AR H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDEMTGYVATRW-YRAPE 192
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 35/208 (16%)
Query: 367 TPRKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
P + + +G+GAYGSV A G A+KKL+ P + R++R E ++L M
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHM 78
Query: 426 ERGSLFRIL-----------HNDAEAV-ELDWAKRVNIVKAMA--------------HAL 459
+ ++ +L ND V L A NIVK L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
Y+H S ++HRD+ +N+ +N E + D G AR H D +A + Y APE
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDEMTGYVATRW-YRAPE 192
Query: 520 LAYT-MVMTEKYDVYSFGVVTLEVLMGK 546
+ M + D++S G + E+L G+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIA 517
AL+YLH+ V+HRDI S++ILL S ++DFG + + + L G+ ++A
Sbjct: 153 ALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMA 209
Query: 518 PELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
PE+ + + D++S G++ +E++ G+ P
Sbjct: 210 PEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNQTLLAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S + G+ Y
Sbjct: 119 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL + D+++ G + +++ G P
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNQTLLAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S + G+ Y
Sbjct: 120 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL + D+++ G + +++ G P
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S G+ Y
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL ++ D+++ G + +++ G P
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 377 IGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G GA+G VYKA+ G + A K + + EEL + E ++L+ + + ++L
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL---EDYIVEIEILATCDHPYIVKLLG 83
Query: 435 ---HN---------------DAEAVELDWA---KRVNIV-KAMAHALAYLHHDCSPSVVH 472
H+ DA +ELD ++ +V + M AL +LH S ++H
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIH 140
Query: 473 RDISSNNILLNSKLEAFVADFG-TARLLHADSSNQTLLAGSYGYIAPELAYTMVMTE--- 528
RD+ + N+L+ + + +ADFG +A+ L + + Y ++APE+ M +
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPY-WMAPEVVMCETMKDTPY 199
Query: 529 --KYDVYSFGVVTLEVLMGKHP 548
K D++S G+ +E+ + P
Sbjct: 200 DYKADIWSLGITLIEMAQIEPP 221
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 95/221 (42%), Gaps = 17/221 (7%)
Query: 348 GNKLSGRVPYSNKHLSSMPTPRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETE 407
G+ G V + + + KI SK G+ A + LKKLN P
Sbjct: 19 GSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII 78
Query: 408 ELAFIRSFRNEAQVLSQMERGSLF-RILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
++ + VL ME G LF +++ N L A M A+ YLH +
Sbjct: 79 KIKNFFDAEDYYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN- 133
Query: 467 SPSVVHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYT 523
++HRD+ N+LL+S+ E + DFG +++L S +T L G+ Y+APE+ +
Sbjct: 134 --GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPTYLAPEVLVS 190
Query: 524 MVMTEKY----DVYSFGVVTLEVLMGKHPRDLHSTLSSSYD 560
V T Y D +S GV+ L G P H T S D
Sbjct: 191 -VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 230
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 95/221 (42%), Gaps = 17/221 (7%)
Query: 348 GNKLSGRVPYSNKHLSSMPTPRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETE 407
G+ G V + + + KI SK G+ A + LKKLN P
Sbjct: 18 GSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII 77
Query: 408 ELAFIRSFRNEAQVLSQMERGSLF-RILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
++ + VL ME G LF +++ N L A M A+ YLH +
Sbjct: 78 KIKNFFDAEDYYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN- 132
Query: 467 SPSVVHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYT 523
++HRD+ N+LL+S+ E + DFG +++L S +T L G+ Y+APE+ +
Sbjct: 133 --GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPTYLAPEVLVS 189
Query: 524 MVMTEKY----DVYSFGVVTLEVLMGKHPRDLHSTLSSSYD 560
V T Y D +S GV+ L G P H T S D
Sbjct: 190 -VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 229
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNQTLLAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S + G+ Y
Sbjct: 149 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 205
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL + D+++ G + +++ G P
Sbjct: 206 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 59/283 (20%)
Query: 369 RKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEE------------------LA 410
R I + IG G +G V++ + G A+K +S E L
Sbjct: 6 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 64
Query: 411 FIRSFRNEAQVLSQM-------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
FI + + +Q+ E GSLF L+ VE + + + A LA+LH
Sbjct: 65 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLH 120
Query: 464 HDC-----SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL------LAGS 512
+ P++ HRD+ S NIL+ +AD G A + DS+ T+ G+
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGT 178
Query: 513 YGYIAPEL---AYTMVMTEKY---DVYSFGVVTLEVLMGKHPRDLHSTLSSSY------D 560
Y+APE+ + M E + D+Y+ G+V E+ +H Y D
Sbjct: 179 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 238
Query: 561 PKI--MLIDVLDQRLPP--PVDRKVIQDILLVSTISFACLQSN 599
P + M V +Q+L P P + + + +++ I C +N
Sbjct: 239 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 281
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNQTLLAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S + G+ Y
Sbjct: 147 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL + D+++ G + +++ G P
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNQTLLAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S + G+ Y
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL + D+++ G + +++ G P
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 39/215 (18%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPET-------EELAFIRSFRNEAQV-------- 421
+G G +G V+ N A+K L P T EE +++ +++ V
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 422 -------LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRD 474
M +GSL L +D E ++ K ++ +A +AY+ + +HRD
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRD 134
Query: 475 ISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYD 531
+ + N+L++ L +ADFG AR++ + + T G+ + APE T K +
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSN 192
Query: 532 VYSFGVVTLEVL-MGKHP------RDLHSTLSSSY 559
V+SFG++ E++ GK P D+ S LS Y
Sbjct: 193 VWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGY 227
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNQTLLAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S + G+ Y
Sbjct: 145 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL + D+++ G + +++ G P
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNQTLLAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S + G+ Y
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL + D+++ G + +++ G P
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 95/221 (42%), Gaps = 17/221 (7%)
Query: 348 GNKLSGRVPYSNKHLSSMPTPRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETE 407
G+ G V + + + KI SK G+ A + LKKLN P
Sbjct: 25 GSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII 84
Query: 408 ELAFIRSFRNEAQVLSQMERGSLF-RILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
++ + VL ME G LF +++ N L A M A+ YLH +
Sbjct: 85 KIKNFFDAEDYYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN- 139
Query: 467 SPSVVHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYT 523
++HRD+ N+LL+S+ E + DFG +++L S +T L G+ Y+APE+ +
Sbjct: 140 --GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPTYLAPEVLVS 196
Query: 524 MVMTEKY----DVYSFGVVTLEVLMGKHPRDLHSTLSSSYD 560
V T Y D +S GV+ L G P H T S D
Sbjct: 197 -VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 236
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNQTLLAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S + G+ Y
Sbjct: 142 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL + D+++ G + +++ G P
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 95/221 (42%), Gaps = 17/221 (7%)
Query: 348 GNKLSGRVPYSNKHLSSMPTPRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETE 407
G+ G V + + + KI SK G+ A + LKKLN P
Sbjct: 19 GSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII 78
Query: 408 ELAFIRSFRNEAQVLSQMERGSLF-RILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
++ + VL ME G LF +++ N L A M A+ YLH +
Sbjct: 79 KIKNFFDAEDYYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN- 133
Query: 467 SPSVVHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYT 523
++HRD+ N+LL+S+ E + DFG +++L S +T L G+ Y+APE+ +
Sbjct: 134 --GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPTYLAPEVLVS 190
Query: 524 MVMTEKY----DVYSFGVVTLEVLMGKHPRDLHSTLSSSYD 560
V T Y D +S GV+ L G P H T S D
Sbjct: 191 -VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNQTLLAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S + G+ Y
Sbjct: 142 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL + D+++ G + +++ G P
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNQTLLAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S + G+ Y
Sbjct: 142 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL + D+++ G + +++ G P
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 59/283 (20%)
Query: 369 RKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEE------------------LA 410
R I + IG G +G V++ + G A+K +S E L
Sbjct: 9 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 67
Query: 411 FIRSFRNEAQVLSQM-------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
FI + + +Q+ E GSLF L+ VE + + + A LA+LH
Sbjct: 68 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLH 123
Query: 464 HDC-----SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL------LAGS 512
+ P++ HRD+ S NIL+ +AD G A + DS+ T+ G+
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGT 181
Query: 513 YGYIAPEL---AYTMVMTEKY---DVYSFGVVTLEVLMGKHPRDLHSTLSSSY------D 560
Y+APE+ + M E + D+Y+ G+V E+ +H Y D
Sbjct: 182 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 241
Query: 561 PKI--MLIDVLDQRLPP--PVDRKVIQDILLVSTISFACLQSN 599
P + M V +Q+L P P + + + +++ I C +N
Sbjct: 242 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 284
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNQTLLAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S + G+ Y
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL + D+++ G + +++ G P
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
+ ME GSL L + ++L K +++ +A +A++ + +HRD+ + NI
Sbjct: 85 ITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 140
Query: 481 LLNSKLEAFVADFGTARLLH-ADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVT 539
L++ L +ADFG ARL+ A+ + + + APE T K DV+SFG++
Sbjct: 141 LVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 540 LEVLM-GKHP 548
E++ G+ P
Sbjct: 201 TEIVTHGRIP 210
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNQTLLAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S + G+ Y
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL + D+++ G + +++ G P
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNQTLLAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S + G+ Y
Sbjct: 126 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 182
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL + D+++ G + +++ G P
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNQTLLAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S + G+ Y
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL + D+++ G + +++ G P
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 59/283 (20%)
Query: 369 RKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEE------------------LA 410
R I + IG G +G V++ + G A+K +S E L
Sbjct: 4 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 62
Query: 411 FIRSFRNEAQVLSQM-------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
FI + + +Q+ E GSLF L+ VE + + + A LA+LH
Sbjct: 63 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLH 118
Query: 464 HDC-----SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL------LAGS 512
+ P++ HRD+ S NIL+ +AD G A + DS+ T+ G+
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGT 176
Query: 513 YGYIAPEL---AYTMVMTEKY---DVYSFGVVTLEVLMGKHPRDLHSTLSSSY------D 560
Y+APE+ + M E + D+Y+ G+V E+ +H Y D
Sbjct: 177 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 236
Query: 561 PKI--MLIDVLDQRLPP--PVDRKVIQDILLVSTISFACLQSN 599
P + M V +Q+L P P + + + +++ I C +N
Sbjct: 237 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 95/221 (42%), Gaps = 17/221 (7%)
Query: 348 GNKLSGRVPYSNKHLSSMPTPRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETE 407
G+ G V + + + KI SK G+ A + LKKLN P
Sbjct: 19 GSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII 78
Query: 408 ELAFIRSFRNEAQVLSQMERGSLF-RILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
++ + VL ME G LF +++ N L A M A+ YLH +
Sbjct: 79 KIKNFFDAEDYYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN- 133
Query: 467 SPSVVHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYT 523
++HRD+ N+LL+S+ E + DFG +++L S +T L G+ Y+APE+ +
Sbjct: 134 --GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPTYLAPEVLVS 190
Query: 524 MVMTEKY----DVYSFGVVTLEVLMGKHPRDLHSTLSSSYD 560
V T Y D +S GV+ L G P H T S D
Sbjct: 191 -VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 230
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 59/283 (20%)
Query: 369 RKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEE------------------LA 410
R I + IG G +G V++ + G A+K +S E L
Sbjct: 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 61
Query: 411 FIRSFRNEAQVLSQM-------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
FI + + +Q+ E GSLF L+ VE + + + A LA+LH
Sbjct: 62 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLH 117
Query: 464 HDC-----SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL------LAGS 512
+ P++ HRD+ S NIL+ +AD G A + DS+ T+ G+
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGT 175
Query: 513 YGYIAPEL---AYTMVMTEKY---DVYSFGVVTLEVLMGKHPRDLHSTLSSSY------D 560
Y+APE+ + M E + D+Y+ G+V E+ +H Y D
Sbjct: 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235
Query: 561 PKI--MLIDVLDQRLPP--PVDRKVIQDILLVSTISFACLQSN 599
P + M V +Q+L P P + + + +++ I C +N
Sbjct: 236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 278
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNQTLLAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S + G+ Y
Sbjct: 142 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL + D+++ G + +++ G P
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNQTLLAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S + G+ Y
Sbjct: 141 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL + D+++ G + +++ G P
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 356 PYSNKHLSSMPTPRKIDS---KYCIGTGAYGSVYKAQLPNGRVF----ALKK---LNSPE 405
P NK S+ KI+ +G G++G V+ A+ F ALKK L +
Sbjct: 2 PELNKERPSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD 61
Query: 406 TE-------------ELAFIR----SFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKR 448
E E F+ +F+ + + ME + ++++ + D ++
Sbjct: 62 VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRA 121
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
+ L +LH S +V+RD+ +NILL+ +ADFG + +
Sbjct: 122 TFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNE 178
Query: 509 LAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
G+ YIAPE+ D +SFGV+ E+L+G+ P
Sbjct: 179 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 29/198 (14%)
Query: 377 IGTGAYGSVYKAQ-LPNGRVFALKKL-------NSPETEELAFIRSFRNEAQV------- 421
+G G YG VY + L N A+K++ + P EE+A + +++ V
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 422 --------LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
+ Q+ GSL +L + ++ + K + L YLH + +VHR
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHR 146
Query: 474 DISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPEL--AYTMVMTEKY 530
DI +N+L+N+ ++DFGT++ L + G+ Y+APE+ +
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAA 206
Query: 531 DVYSFGVVTLEVLMGKHP 548
D++S G +E+ GK P
Sbjct: 207 DIWSLGCTIIEMATGKPP 224
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 394 RVFALKKLNSPETEEL-AFIRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIV 452
V LK L+ P +L F RN V+ + G LF + + + E+D A I+
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAA---VII 142
Query: 453 KAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNQTLL 509
K + + YLH ++VHRD+ N+LL SK + + DFG + + + L
Sbjct: 143 KQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL 199
Query: 510 AGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
+Y YIAPE+ EK DV+S GV+ +L G P
Sbjct: 200 GTAY-YIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPP 236
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S G+ Y
Sbjct: 145 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 201
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL + D+++ G + +++ G P
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 49/206 (23%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRN-EAQVLSQMERGSLFRI- 433
IG G++G VY+A+L + G + A+KK+ ++F+N E Q++ +++ ++ R+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQG--------KAFKNRELQIMRKLDHCNIVRLR 79
Query: 434 --LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYL 462
++ E + LD+ + + H +LAY+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL
Sbjct: 139 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 194
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T DV+S G V E+L+G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 55/218 (25%)
Query: 376 CIGTGAYGSVYKAQLP-NGRVFALKKLNSPET---------------------------- 406
+G GA+G V KA+ + R +A+KK+ E
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 407 EELAFIR---SFRNEAQVLSQME---RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALA 460
E F++ + + ++ + QME +L+ ++H++ + D R + + + AL+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR--LFRQILEALS 130
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH--------------ADSSNQ 506
Y+H S ++HRD+ NI ++ + DFG A+ +H S N
Sbjct: 131 YIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 507 TLLAGSYGYIAPE-LAYTMVMTEKYDVYSFGVVTLEVL 543
T G+ Y+A E L T EK D+YS G++ E++
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 49/206 (23%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRN-EAQVLSQMERGSLFRI- 433
IG G++G VY+A+L + G + A+KK+ ++F+N E Q++ +++ ++ R+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQG--------KAFKNRELQIMRKLDHCNIVRLR 79
Query: 434 --LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYL 462
++ E + LD+ + + H +LAY+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL
Sbjct: 139 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 194
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T DV+S G V E+L+G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 118/251 (47%), Gaps = 14/251 (5%)
Query: 125 FSCFPNLESLRILAYYDGFTGSI-PSEISALSKLQLLDLSSNRLR-------GRLTNLNY 176
F+ FP+LE L + + ++ P + L L+ L L SNRL+ L+NL
Sbjct: 52 FASFPHLEELEL---NENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTK 108
Query: 177 MSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLP 236
+ +S N + LL +L NL L+VGDN L+ S L SL+ L L + L+ +P
Sbjct: 109 LDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP 168
Query: 237 QE-IGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQF-NSSIPNELTRLTQLF 294
E + +L L++L + + +I + L L++S + ++ PN L L L
Sbjct: 169 TEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL-NLT 227
Query: 295 HLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGR 354
L ++ L+ + + L +L+LS N I + +L RL + L G +L+
Sbjct: 228 SLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVV 287
Query: 355 VPYSNKHLSSM 365
PY+ + L+ +
Sbjct: 288 EPYAFRGLNYL 298
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 1/177 (0%)
Query: 172 TNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQ 231
T + L +N + L E + +L EL++ +N + P + L +L+ L L N+
Sbjct: 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91
Query: 232 LSGLPQEI-GNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRL 290
L +P + L NL LD+ N I+ + +L L++ N + L
Sbjct: 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGL 151
Query: 291 TQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLS 347
L L L L+ ++ + L L L + NI +L RL L +S
Sbjct: 152 NSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEIS 208
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 73/188 (38%), Gaps = 18/188 (9%)
Query: 233 SGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQ 292
G+P E LLD+G N I F L L+L+ N ++ P L
Sbjct: 28 EGIPTET------RLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN 81
Query: 293 LFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLS 352
L L L SN+L + +LT LD+S N I + L L L + N L
Sbjct: 82 LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL- 140
Query: 353 GRVPYSNKHLSSMPTPRKIDSKYC----IGTGAYGSVYKAQLPNGRVFALKKLNSPETEE 408
V S++ S + + ++ + C I T A ++ V L+ LN +
Sbjct: 141 --VYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLI-----VLRLRHLNINAIRD 193
Query: 409 LAFIRSFR 416
+F R +R
Sbjct: 194 YSFKRLYR 201
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 220 TSLKILILAQNQLSGLPQ-EIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQ 278
T ++L L +N++ L Q E + +L L++ N + P +L L L N+
Sbjct: 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91
Query: 279 FNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKL 338
T L+ L LD+S NK+ + + +L L++ +N++ + L
Sbjct: 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGL 151
Query: 339 SRLDYLNLSGNKLS 352
+ L+ L L L+
Sbjct: 152 NSLEQLTLEKCNLT 165
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 90/226 (39%), Gaps = 39/226 (17%)
Query: 364 SMPTPRKIDSKYCIGTGAYGSVYKAQLPNGRV----FALK------KLNSPET------- 406
++P D +G GAYG V QL RV A+K ++ PE
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 57
Query: 407 ------EELAFIRSFRNEAQV----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMA 456
E + R E + L G LF + D E D A+R +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLM 114
Query: 457 HALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYG 514
+ YLH + HRDI N+LL+ + ++DFG A + ++ + L + G+
Sbjct: 115 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 515 YIAPE-LAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
Y+APE L E DV+S G+V +L G+ P D S Y
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 90/226 (39%), Gaps = 39/226 (17%)
Query: 364 SMPTPRKIDSKYCIGTGAYGSVYKAQLPNGRV----FALK------KLNSPET------- 406
++P D +G GAYG V QL RV A+K ++ PE
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 57
Query: 407 ------EELAFIRSFRNEAQV----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMA 456
E + R E + L G LF + D E D A+R +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLM 114
Query: 457 HALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYG 514
+ YLH + HRDI N+LL+ + ++DFG A + ++ + L + G+
Sbjct: 115 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 515 YIAPE-LAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
Y+APE L E DV+S G+V +L G+ P D S Y
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 90/226 (39%), Gaps = 39/226 (17%)
Query: 364 SMPTPRKIDSKYCIGTGAYGSVYKAQLPNGRV----FALK------KLNSPET------- 406
++P D +G GAYG V QL RV A+K ++ PE
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 58
Query: 407 ------EELAFIRSFRNEAQV----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMA 456
E + R E + L G LF + D E D A+R +
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLM 115
Query: 457 HALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYG 514
+ YLH + HRDI N+LL+ + ++DFG A + ++ + L + G+
Sbjct: 116 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 515 YIAPE-LAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
Y+APE L E DV+S G+V +L G+ P D S Y
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
+ ME GSL L + ++L K +++ +A +A++ + +HRD+ + NI
Sbjct: 93 ITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 148
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVYSFGV 537
L++ L +ADFG ARL+ + + T G+ + APE T K DV+SFG+
Sbjct: 149 LVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 206
Query: 538 VTLEVL 543
+ E++
Sbjct: 207 LLTEIV 212
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
+ ME GSL L + ++L K +++ +A +A++ + +HRD+ + NI
Sbjct: 91 ITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 146
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVYSFGV 537
L++ L +ADFG ARL+ + + T G+ + APE T K DV+SFG+
Sbjct: 147 LVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 204
Query: 538 VTLEVL 543
+ E++
Sbjct: 205 LLTEIV 210
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 49/206 (23%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRN-EAQVLSQMERGSLFRI- 433
IG G++G VY+A+L + G + A+KK+ ++F+N E Q++ +++ ++ R+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQG--------KAFKNRELQIMRKLDHCNIVRLR 79
Query: 434 --LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYL 462
++ E + LD+ + + H +LAY+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL
Sbjct: 139 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 194
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T DV+S G V E+L+G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 374 KYCIGTGAYGSVYKAQ-LPNGRVFALKKL-------NSPETEELAFIRSFRNEAQV---- 421
+ +G G YG VY + L N A+K++ + P EE+A + +++ V
Sbjct: 13 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG 72
Query: 422 -----------LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSV 470
+ Q+ GSL +L + ++ + K + L YLH + +
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QI 129
Query: 471 VHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPEL--AYTMVMT 527
VHRDI +N+L+N+ ++DFGT++ L + G+ Y+APE+
Sbjct: 130 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 189
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
+ D++S G +E+ GK P
Sbjct: 190 KAADIWSLGCTIIEMATGKPP 210
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
+ ME GSL L + ++L K +++ +A +A++ + +HRD+ + NI
Sbjct: 94 ITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 149
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVYSFGV 537
L++ L +ADFG ARL+ + + T G+ + APE T K DV+SFG+
Sbjct: 150 LVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 207
Query: 538 VTLEVL 543
+ E++
Sbjct: 208 LLTEIV 213
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 86/213 (40%), Gaps = 39/213 (18%)
Query: 377 IGTGAYGSVYKAQLPNGRV----FALK------KLNSPET-------------EELAFIR 413
+G GAYG V QL RV A+K ++ PE E +
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 414 SFRNEAQV----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
R E + L G LF + D E D A+R + + YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVVYLH---GIG 125
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGYIAPE-LAYTMVM 526
+ HRDI N+LL+ + ++DFG A + ++ + L + G+ Y+APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 527 TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
E DV+S G+V +L G+ P D S Y
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 90/226 (39%), Gaps = 39/226 (17%)
Query: 364 SMPTPRKIDSKYCIGTGAYGSVYKAQLPNGRV----FALK------KLNSPET------- 406
++P D +G GAYG V QL RV A+K ++ PE
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 57
Query: 407 ------EELAFIRSFRNEAQV----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMA 456
E + R E + L G LF + D E D A+R +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLM 114
Query: 457 HALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYG 514
+ YLH + HRDI N+LL+ + ++DFG A + ++ + L + G+
Sbjct: 115 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 515 YIAPE-LAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
Y+APE L E DV+S G+V +L G+ P D S Y
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGY 515
AL YLH ++HRD+ NILLN + + DFGTA++L +S G+ Y
Sbjct: 141 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 197
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PEL + D+++ G + +++ G P
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 95/221 (42%), Gaps = 17/221 (7%)
Query: 348 GNKLSGRVPYSNKHLSSMPTPRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETE 407
G+ G V + + + +I SK G+ A + LKKLN P
Sbjct: 158 GSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII 217
Query: 408 ELAFIRSFRNEAQVLSQMERGSLF-RILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
++ + VL ME G LF +++ N L A M A+ YLH +
Sbjct: 218 KIKNFFDAEDYYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN- 272
Query: 467 SPSVVHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYT 523
++HRD+ N+LL+S+ E + DFG +++L S +T L G+ Y+APE+ +
Sbjct: 273 --GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPTYLAPEVLVS 329
Query: 524 MVMTEKY----DVYSFGVVTLEVLMGKHPRDLHSTLSSSYD 560
V T Y D +S GV+ L G P H T S D
Sbjct: 330 -VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 369
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 49/206 (23%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRN-EAQVLSQMERGSLFRI- 433
IG G++G VY+A+L + G + A+KK+ + F+N E Q++ +++ ++ R+
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 80
Query: 434 --LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYL 462
++ E + LD+ + + H +LAY+
Sbjct: 81 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL
Sbjct: 140 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 195
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T DV+S G V E+L+G+
Sbjct: 196 FGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 30/196 (15%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--------EELAFIRSFRNEAQVLSQ 424
+G G +G V+ A+K L SP+ ++L R R A V +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
ME GSL L + ++L K +++ +A +A++ + +HRD+
Sbjct: 81 PIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLR 136
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL++ L +ADFG ARL+ + + T G+ + APE T K DV+
Sbjct: 137 AANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 534 SFGVVTLEVLM-GKHP 548
SFG++ E++ G+ P
Sbjct: 195 SFGILLTEIVTHGRIP 210
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 86/213 (40%), Gaps = 39/213 (18%)
Query: 377 IGTGAYGSVYKAQLPNGRV----FALK------KLNSPET-------------EELAFIR 413
+G GAYG V QL RV A+K ++ PE E +
Sbjct: 13 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 69
Query: 414 SFRNEAQV----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
R E + L G LF + D E D A+R + + YLH
Sbjct: 70 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVVYLH---GIG 123
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGYIAPE-LAYTMVM 526
+ HRDI N+LL+ + ++DFG A + ++ + L + G+ Y+APE L
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 527 TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
E DV+S G+V +L G+ P D S Y
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 216
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 49/206 (23%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRN-EAQVLSQMERGSLFRI- 433
IG G++G VY+A+L + G + A+KK+ + F+N E Q++ +++ ++ R+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 79
Query: 434 --LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYL 462
++ E + LD+ + + H +LAY+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL
Sbjct: 139 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 194
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T DV+S G V E+L+G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 30/196 (15%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--------EELAFIRSFRNEAQVLSQ 424
+G G +G V+ A+K L SP+ ++L R R A V +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 82
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
ME GSL L + ++L K +++ +A +A++ + +HRD+
Sbjct: 83 PIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLR 138
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL++ L +ADFG ARL+ + + T G+ + APE T K DV+
Sbjct: 139 AANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 196
Query: 534 SFGVVTLEVLM-GKHP 548
SFG++ E++ G+ P
Sbjct: 197 SFGILLTEIVTHGRIP 212
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 49/206 (23%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRN-EAQVLSQMERGSLFRI- 433
IG G++G VY+A+L + G + A+KK+ + F+N E Q++ +++ ++ R+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 79
Query: 434 --LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYL 462
++ E + LD+ + + H +LAY+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL
Sbjct: 139 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 194
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T DV+S G V E+L+G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 86/213 (40%), Gaps = 39/213 (18%)
Query: 377 IGTGAYGSVYKAQLPNGRV----FALK------KLNSPET-------------EELAFIR 413
+G GAYG V QL RV A+K ++ PE E +
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 414 SFRNEAQV----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
R E + L G LF + D E D A+R + + YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVVYLH---GIG 124
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGYIAPE-LAYTMVM 526
+ HRDI N+LL+ + ++DFG A + ++ + L + G+ Y+APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 527 TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
E DV+S G+V +L G+ P D S Y
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 30/196 (15%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--------EELAFIRSFRNEAQVLSQ 424
+G G +G V+ A+K L SP+ ++L R R A V +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 81
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
ME GSL L + ++L K +++ +A +A++ + +HRD+
Sbjct: 82 PIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLR 137
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL++ L +ADFG ARL+ + + T G+ + APE T K DV+
Sbjct: 138 AANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 195
Query: 534 SFGVVTLEVLM-GKHP 548
SFG++ E++ G+ P
Sbjct: 196 SFGILLTEIVTHGRIP 211
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 10/132 (7%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
+ ME GSL L + ++L K +++ +A +A++ + +HRD+ + NI
Sbjct: 85 ITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 140
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVYSFGV 537
L++ L +ADFG ARL+ + + T G+ + APE T K DV+SFG+
Sbjct: 141 LVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 538 VTLEVLM-GKHP 548
+ E++ G+ P
Sbjct: 199 LLTEIVTHGRIP 210
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 48/213 (22%)
Query: 374 KYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERG---S 429
K +G GAYG V A P G + A+KK+ P + L +R+ R E ++L + +
Sbjct: 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLR-EIKILKHFKHENIIT 73
Query: 430 LFRILHNDA-----------EAVELDWAKRVN-----------IVKAMAHALAYLHHDCS 467
+F I D+ E ++ D + ++ + A+ LH
Sbjct: 74 IFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH---G 130
Query: 468 PSVVHRDISSNNILLNSKLEAFVADFGTARLLH---ADSSNQT-------LLAGSYGYIA 517
+V+HRD+ +N+L+NS + V DFG AR++ AD+S T + Y A
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRA 190
Query: 518 PELAYTMVMTEKY----DVYSFGVVTLEVLMGK 546
PE+ M+ + KY DV+S G + E+ + +
Sbjct: 191 PEV---MLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 49/206 (23%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRN-EAQVLSQMERGSLFRI- 433
IG G++G VY+A+L + G + A+KK+ + F+N E Q++ +++ ++ R+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 79
Query: 434 --LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYL 462
++ E + LD+ + + H +LAY+
Sbjct: 80 YFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL
Sbjct: 139 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 194
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T DV+S G V E+L+G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 86/213 (40%), Gaps = 39/213 (18%)
Query: 377 IGTGAYGSVYKAQLPNGRV----FALK------KLNSPET-------------EELAFIR 413
+G GAYG V QL RV A+K ++ PE E +
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 414 SFRNEAQV----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
R E + L G LF + D E D A+R + + YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVVYLH---GIG 125
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGYIAPE-LAYTMVM 526
+ HRDI N+LL+ + ++DFG A + ++ + L + G+ Y+APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 527 TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
E DV+S G+V +L G+ P D S Y
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 86/213 (40%), Gaps = 39/213 (18%)
Query: 377 IGTGAYGSVYKAQLPNGRV----FALK------KLNSPET-------------EELAFIR 413
+G GAYG V QL RV A+K ++ PE E +
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 414 SFRNEAQV----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
R E + L G LF + D E D A+R + + YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVVYLH---GIG 125
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGYIAPE-LAYTMVM 526
+ HRDI N+LL+ + ++DFG A + ++ + L + G+ Y+APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 527 TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
E DV+S G+V +L G+ P D S Y
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 86/213 (40%), Gaps = 39/213 (18%)
Query: 377 IGTGAYGSVYKAQLPNGRV----FALK------KLNSPET-------------EELAFIR 413
+G GAYG V QL RV A+K ++ PE E +
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 414 SFRNEAQV----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
R E + L G LF + D E D A+R + + YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVVYLH---GIG 125
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGYIAPE-LAYTMVM 526
+ HRDI N+LL+ + ++DFG A + ++ + L + G+ Y+APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 527 TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
E DV+S G+V +L G+ P D S Y
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 49/206 (23%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRN-EAQVLSQMERGSLFRI- 433
IG G++G VY+A+L + G + A+KK+ + F+N E Q++ +++ ++ R+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 79
Query: 434 --LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYL 462
++ E + LD+ + + H +LAY+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL
Sbjct: 139 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 194
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T DV+S G V E+L+G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 86/213 (40%), Gaps = 39/213 (18%)
Query: 377 IGTGAYGSVYKAQLPNGRV----FALK------KLNSPET-------------EELAFIR 413
+G GAYG V QL RV A+K ++ PE E +
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 414 SFRNEAQV----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
R E + L G LF + D E D A+R + + YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVVYLH---GIG 125
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGYIAPE-LAYTMVM 526
+ HRDI N+LL+ + ++DFG A + ++ + L + G+ Y+APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 527 TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
E DV+S G+V +L G+ P D S Y
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 90/226 (39%), Gaps = 39/226 (17%)
Query: 364 SMPTPRKIDSKYCIGTGAYGSVYKAQLPNGRV----FALK------KLNSPET------- 406
++P D +G GAYG V QL RV A+K ++ PE
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 58
Query: 407 ------EELAFIRSFRNEAQV----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMA 456
E + R E + L G LF + D E D A+R +
Sbjct: 59 NAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLM 115
Query: 457 HALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYG 514
+ YLH + HRDI N+LL+ + ++DFG A + ++ + L + G+
Sbjct: 116 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 515 YIAPE-LAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
Y+APE L E DV+S G+V +L G+ P D S Y
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 49/206 (23%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRN-EAQVLSQMERGSLFRI- 433
IG G++G VY+A+L + G + A+KK+ + F+N E Q++ +++ ++ R+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 91
Query: 434 --LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYL 462
++ E + LD+ + + H +LAY+
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL
Sbjct: 151 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 206
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T DV+S G V E+L+G+
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 49/206 (23%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRN-EAQVLSQMERGSLFRI- 433
IG G++G VY+A+L + G + A+KK+ + F+N E Q++ +++ ++ R+
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 92
Query: 434 --LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYL 462
++ E + LD+ + + H +LAY+
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL
Sbjct: 152 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 207
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T DV+S G V E+L+G+
Sbjct: 208 FGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 200 ELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEI-GNLKNLMLLDVGNNDIIGP 258
+LD+ N L RLT L++L L N+L LP I LKNL L V +N +
Sbjct: 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQA- 99
Query: 259 IPSTLGLFS---DLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASME 315
+P +G+F +L+ L L NQ S P LT+L +L L N+L +
Sbjct: 100 LP--IGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157
Query: 316 DLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVP 356
L L L NN +K G KL+ L L L N+L RVP
Sbjct: 158 SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVP 197
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 85/212 (40%), Gaps = 34/212 (16%)
Query: 146 SIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLKNL 198
+IPS I A +K LDL SN+L RLT L + L+ N L L LKNL
Sbjct: 30 AIPSNIPADTKK--LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNL 87
Query: 199 IELDVGDNSLIG-PIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIG 257
L V DN L PI + +L +L L L +NQL LP
Sbjct: 88 ETLWVTDNKLQALPIGV-FDQLVNLAELRLDRNQLKSLP--------------------- 125
Query: 258 PIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDL 317
P + L+YL L N+ S +LT L L L +N+L + +L
Sbjct: 126 --PRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTEL 183
Query: 318 TWLDLSNNNIKGSIPGEITKLSRLDYLNLSGN 349
L L NN +K G L +L L L N
Sbjct: 184 KTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 259 IPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQI-ASMEDL 317
IPS + +D LDL N+ +S RLT+L L L+ NKL +P+ I +++L
Sbjct: 31 IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT-LPAGIFKELKNL 87
Query: 318 TWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVP 356
L +++N ++ G +L L L L N+L P
Sbjct: 88 ETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPP 126
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKAN-----KEILDEAYVMASVDNP 111
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 112 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 165
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 166 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 222
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 223 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Query: 428 GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLE 487
G LF + D E D A+R + + YLH + HRDI N+LL+ +
Sbjct: 89 GELFDRIEPDIGMPEPD-AQR--FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 142
Query: 488 AFVADFGTARLLHADSSNQTL--LAGSYGYIAPE-LAYTMVMTEKYDVYSFGVVTLEVLM 544
++DFG A + ++ + L + G+ Y+APE L E DV+S G+V +L
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 545 GKHPRDLHSTLSSSY 559
G+ P D S Y
Sbjct: 203 GELPWDQPSDSCQEY 217
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 90/226 (39%), Gaps = 39/226 (17%)
Query: 364 SMPTPRKIDSKYCIGTGAYGSVYKAQLPNGRV----FALK------KLNSPET------- 406
++P D +G GAYG V QL RV A+K ++ PE
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 57
Query: 407 ------EELAFIRSFRNEAQV----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMA 456
E + R E + L G LF + D E D A+R +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLM 114
Query: 457 HALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYG 514
+ YLH + HRDI N+LL+ + ++DFG A + ++ + L + G+
Sbjct: 115 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 515 YIAPE-LAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
Y+APE L E DV+S G+V +L G+ P D S Y
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 86/213 (40%), Gaps = 39/213 (18%)
Query: 377 IGTGAYGSVYKAQLPNGRV----FALK------KLNSPET-------------EELAFIR 413
+G GAYG V QL RV A+K ++ PE E +
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 414 SFRNEAQV----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
R E + L G LF + D E D A+R + + YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVVYLH---GIG 124
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGYIAPE-LAYTMVM 526
+ HRDI N+LL+ + ++DFG A + ++ + L + G+ Y+APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 527 TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
E DV+S G+V +L G+ P D S Y
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 49/206 (23%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRN-EAQVLSQMERGSLFRI- 433
IG G++G VY+A+L + G + A+KK+ + F+N E Q++ +++ ++ R+
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 87
Query: 434 --LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYL 462
++ E + LD+ + + H +LAY+
Sbjct: 88 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL
Sbjct: 147 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 202
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T DV+S G V E+L+G+
Sbjct: 203 FGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 17/221 (7%)
Query: 348 GNKLSGRVPYSNKHLSSMPTPRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETE 407
G+ G V + + + +I SK G+ A + LKKLN P
Sbjct: 144 GSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII 203
Query: 408 ELAFIRSFRNEAQVLSQMERGSLF-RILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
++ + VL ME G LF +++ N L A M A+ YLH +
Sbjct: 204 KIKNFFDAEDYYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN- 258
Query: 467 SPSVVHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYT 523
++HRD+ N+LL+S+ E + DFG +++L ++S L G+ Y+APE+ +
Sbjct: 259 --GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLAPEVLVS 315
Query: 524 MVMTEKY----DVYSFGVVTLEVLMGKHPRDLHSTLSSSYD 560
V T Y D +S GV+ L G P H T S D
Sbjct: 316 -VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 355
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 49/206 (23%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRN-EAQVLSQMERGSLFRI- 433
IG G++G VY+A+L + G + A+KK+ + F+N E Q++ +++ ++ R+
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 84
Query: 434 --LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYL 462
++ E + LD+ + + H +LAY+
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 143
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL
Sbjct: 144 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 199
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T DV+S G V E+L+G+
Sbjct: 200 FGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 36/197 (18%)
Query: 377 IGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLF---- 431
IG G+YG V+K + G++ A+KK E + + + R E ++L Q++ +L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALR-EIRMLKQLKHPNLVNLLE 69
Query: 432 -----RILHNDAEAV------ELDWAKR---VNIVKAMA----HALAYLH-HDCSPSVVH 472
R LH E ELD +R ++VK++ A+ + H H+C +H
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC----IH 125
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKY-- 530
RD+ NIL+ + DFG ARLL S + Y +PEL +V +Y
Sbjct: 126 RDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPEL---LVGDTQYGP 182
Query: 531 --DVYSFGVVTLEVLMG 545
DV++ G V E+L G
Sbjct: 183 PVDVWAIGCVFAELLSG 199
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 49/206 (23%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRN-EAQVLSQMERGSLFRI- 433
IG G++G VY+A+L + G + A+KK+ + F+N E Q++ +++ ++ R+
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 98
Query: 434 --LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYL 462
++ E + LD+ + + H +LAY+
Sbjct: 99 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL
Sbjct: 158 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 213
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T DV+S G V E+L+G+
Sbjct: 214 FGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 49/206 (23%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRN-EAQVLSQMERGSLFRI- 433
IG G++G VY+A+L + G + A+KK+ + F+N E Q++ +++ ++ R+
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 83
Query: 434 --LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYL 462
++ E + LD+ + + H +LAY+
Sbjct: 84 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL
Sbjct: 143 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 198
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T DV+S G V E+L+G+
Sbjct: 199 FGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPE------------TEELAFIRSFR--NEAQV 421
IG GAYG+VYKA+ P+ G ALK + P E+A +R V
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 422 LSQMERGSLFR----------ILHNDAE-AVELDWAKRV--------NIVKAMAHALAYL 462
+ M+ + R H D + LD A ++++ L +L
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 136
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAY 522
H +C +VHRD+ NIL+ S +ADFG AR +++ T + + Y APE+
Sbjct: 137 HANC---IVHRDLKPENILVTSGGTVKLADFGLAR-IYSYQMALTPVVVTLWYRAPEVLL 192
Query: 523 TMVMTEKYDVYSFGVVTLEVLMGK 546
D++S G + E+ K
Sbjct: 193 QSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Query: 428 GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLE 487
G LF + D E D A+R + + YLH + HRDI N+LL+ +
Sbjct: 89 GELFDRIEPDIGMPEPD-AQR--FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 142
Query: 488 AFVADFGTARLLHADSSNQTL--LAGSYGYIAPE-LAYTMVMTEKYDVYSFGVVTLEVLM 544
++DFG A + ++ + L + G+ Y+APE L E DV+S G+V +L
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 545 GKHPRDLHSTLSSSY 559
G+ P D S Y
Sbjct: 203 GELPWDQPSDSCQEY 217
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 30/196 (15%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--------EELAFIRSFRNEAQVLSQ 424
+G G +G V+ A+K L SP+ ++L R R A V +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
ME GSL L + ++L K +++ +A +A++ + +HRD+
Sbjct: 81 PIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLR 136
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL++ L +ADFG ARL+ + + T G+ + APE T K DV+
Sbjct: 137 AANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 534 SFGVVTLEVLM-GKHP 548
SFG++ E++ G+ P
Sbjct: 195 SFGILLTEIVTHGRIP 210
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 86/213 (40%), Gaps = 39/213 (18%)
Query: 377 IGTGAYGSVYKAQLPNGRV----FALK------KLNSPET-------------EELAFIR 413
+G GAYG V QL RV A+K ++ PE E +
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 414 SFRNEAQV----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
R E + L G LF + D E D A+R + + YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVVYLH---GIG 124
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGYIAPE-LAYTMVM 526
+ HRDI N+LL+ + ++DFG A + ++ + L + G+ Y+APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 527 TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
E DV+S G+V +L G+ P D S Y
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 49/206 (23%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRN-EAQVLSQMERGSLFRI- 433
IG G++G VY+A+L + G + A+KK+ + F+N E Q++ +++ ++ R+
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHCNIVRLR 115
Query: 434 --LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYL 462
++ E + LD+ + + H +LAY+
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 174
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL
Sbjct: 175 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 230
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T DV+S G V E+L+G+
Sbjct: 231 FGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 49/206 (23%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRN-EAQVLSQMERGSLFRI- 433
IG G++G VY+A+L + G + A+KK+ + F+N E Q++ +++ ++ R+
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 107
Query: 434 --LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYL 462
++ E + LD+ + + H +LAY+
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 166
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL
Sbjct: 167 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 222
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T DV+S G V E+L+G+
Sbjct: 223 FGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 49/206 (23%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRN-EAQVLSQMERGSLFRI- 433
IG G++G VY+A+L + G + A+KK+ + F+N E Q++ +++ ++ R+
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHCNIVRLR 117
Query: 434 --LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYL 462
++ E + LD+ + + H +LAY+
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 176
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL
Sbjct: 177 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 232
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T DV+S G V E+L+G+
Sbjct: 233 FGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 49/206 (23%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRN-EAQVLSQMERGSLFRI- 433
IG G++G VY+A+L + G + A+KK+ + F+N E Q++ +++ ++ R+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 91
Query: 434 --LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYL 462
++ E + LD+ + + H +LAY+
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL
Sbjct: 151 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 206
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T DV+S G V E+L+G+
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 49/206 (23%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRN-EAQVLSQMERGSLFRI- 433
IG G++G VY+A+L + G + A+KK+ + F+N E Q++ +++ ++ R+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHCNIVRLR 113
Query: 434 --LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYL 462
++ E + LD+ + + H +LAY+
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL
Sbjct: 173 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 228
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T DV+S G V E+L+G+
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 48/213 (22%)
Query: 374 KYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERG---S 429
K +G GAYG V A P G + A+KK+ P + L +R+ R E ++L + +
Sbjct: 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLR-EIKILKHFKHENIIT 73
Query: 430 LFRILHNDA-----------EAVELDWAKRVN-----------IVKAMAHALAYLHHDCS 467
+F I D+ E ++ D + ++ + A+ LH
Sbjct: 74 IFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH---G 130
Query: 468 PSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG----------YIA 517
+V+HRD+ +N+L+NS + V DFG AR++ +++ + G Y A
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRA 190
Query: 518 PELAYTMVMTEKY----DVYSFGVVTLEVLMGK 546
PE+ M+ + KY DV+S G + E+ + +
Sbjct: 191 PEV---MLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 48/213 (22%)
Query: 374 KYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERG---S 429
K +G GAYG V A P G + A+KK+ P + L +R+ R E ++L + +
Sbjct: 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLR-EIKILKHFKHENIIT 73
Query: 430 LFRILHNDA-----------EAVELDWAKRVN-----------IVKAMAHALAYLHHDCS 467
+F I D+ E ++ D + ++ + A+ LH
Sbjct: 74 IFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH---G 130
Query: 468 PSVVHRDISSNNILLNSKLEAFVADFGTARLLH----------ADSSNQTLLAGSYGYIA 517
+V+HRD+ +N+L+NS + V DFG AR++ S T + Y A
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRA 190
Query: 518 PELAYTMVMTEKY----DVYSFGVVTLEVLMGK 546
PE+ M+ + KY DV+S G + E+ + +
Sbjct: 191 PEV---MLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 49/206 (23%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRN-EAQVLSQMERGSLFRI- 433
IG G++G VY+A+L + G + A+KK+ + F+N E Q++ +++ ++ R+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHCNIVRLR 113
Query: 434 --LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYL 462
++ E + LD+ + + H +LAY+
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL
Sbjct: 173 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 228
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T DV+S G V E+L+G+
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 10/132 (7%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
+ ME GSL L + ++L K +++ +A +A++ + +HRD+ + NI
Sbjct: 90 ITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 145
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVYSFGV 537
L++ L +ADFG ARL+ + + T G+ + APE T K DV+SFG+
Sbjct: 146 LVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 203
Query: 538 VTLEVLM-GKHP 548
+ E++ G+ P
Sbjct: 204 LLTEIVTHGRIP 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 10/132 (7%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
+ ME GSL L + ++L K +++ +A +A++ + +HRD+ + NI
Sbjct: 91 ITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 146
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVYSFGV 537
L++ L +ADFG ARL+ + + T G+ + APE T K DV+SFG+
Sbjct: 147 LVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 204
Query: 538 VTLEVLM-GKHP 548
+ E++ G+ P
Sbjct: 205 LLTEIVTHGRIP 216
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
+ ME GSL L + ++L K +++ +A +A++ + +HRD+ + NI
Sbjct: 95 ITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 150
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVYSFGV 537
L++ L +ADFG ARL+ + + T G+ + APE T K DV+SFG+
Sbjct: 151 LVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 208
Query: 538 VTLEVL 543
+ E++
Sbjct: 209 LLTEIV 214
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 41/206 (19%)
Query: 377 IGTGAYGSVYK-AQLPNGRVFALKKLNSPETEE---------------------LAFIRS 414
IG GAYGSV K P+G++ A+K++ S E+ + F +
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 415 FRNEAQVLSQMERGS-----LFRILH---NDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
E ME S ++ ++ +D E+ + VKA+ H L
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL---- 145
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVM 526
++HRDI +NILL+ + DFG + L DS +T AG Y+APE
Sbjct: 146 --KIIHRDIKPSNILLDRSGNIKLCDFGISGQL-VDSIAKTRDAGCRPYMAPERIDPSAS 202
Query: 527 TEKY----DVYSFGVVTLEVLMGKHP 548
+ Y DV+S G+ E+ G+ P
Sbjct: 203 RQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 86/213 (40%), Gaps = 39/213 (18%)
Query: 377 IGTGAYGSVYKAQLPNGRV----FALK------KLNSPET-------------EELAFIR 413
+G GAYG V QL RV A+K ++ PE E +
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 414 SFRNEAQV----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
R E + L G LF + D E D A+R + + YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVVYLH---GIG 124
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYGYIAPE-LAYTMVM 526
+ HRDI N+LL+ + ++DFG A + ++ + L + G+ Y+APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 527 TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
E DV+S G+V +L G+ P D S Y
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 90/226 (39%), Gaps = 39/226 (17%)
Query: 364 SMPTPRKIDSKYCIGTGAYGSVYKAQLPNGRV----FALK------KLNSPET------- 406
++P D +G GAYG V QL RV A+K ++ PE
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXI 58
Query: 407 ------EELAFIRSFRNEAQV----LSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMA 456
E + R E + L G LF + D E D A+R +
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLM 115
Query: 457 HALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL--LAGSYG 514
+ YLH + HRDI N+LL+ + ++DFG A + ++ + L + G+
Sbjct: 116 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 172
Query: 515 YIAPE-LAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559
Y+APE L E DV+S G+V +L G+ P D S Y
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 30/196 (15%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLN----SPET--------EELAFIRSFRNEAQVLSQ 424
+G G +G V+ A+K L SP+ ++L R R A V +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 75
Query: 425 --------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
ME GSL L + ++L K +++ +A +A++ + +HRD+
Sbjct: 76 PIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLR 131
Query: 477 SNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVY 533
+ NIL++ L +ADFG ARL+ + + T G+ + APE T K DV+
Sbjct: 132 AANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 189
Query: 534 SFGVVTLEVLM-GKHP 548
SFG++ E++ G+ P
Sbjct: 190 SFGILLTEIVTHGRIP 205
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 47/205 (22%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRI-- 433
IG G++G VY+A+L + G + A+KK+ L R E Q++ +++ ++ R+
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLDHCNIVRLRY 159
Query: 434 -LHNDAEAVE-------LDWAKRVNIVKAMAH----------------------ALAYLH 463
++ E + LD+ + + H +LAY+H
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELAY 522
S + HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 219 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 274
Query: 523 TMV-MTEKYDVYSFGVVTLEVLMGK 546
T DV+S G V E+L+G+
Sbjct: 275 GATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 425 MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS 484
M +GSL L +D E + K ++ +A +A++ + +HRD+ + NIL+++
Sbjct: 91 MAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSA 146
Query: 485 KLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVYSFGVVTLE 541
L +ADFG AR++ + + T G+ + APE T K DV+SFG++ +E
Sbjct: 147 SLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLME 204
Query: 542 VL 543
++
Sbjct: 205 IV 206
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 81
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 82 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 135
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 136 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Query: 428 GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLE 487
G LF + D E D A+R + + YLH + HRDI N+LL+ +
Sbjct: 89 GELFDRIEPDIGMPEPD-AQR--FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 142
Query: 488 AFVADFGTARLLHADSSNQTL--LAGSYGYIAPE-LAYTMVMTEKYDVYSFGVVTLEVLM 544
++DFG A + ++ + L + G+ Y+APE L E DV+S G+V +L
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 545 GKHPRDLHSTLSSSY 559
G+ P D S Y
Sbjct: 203 GELPWDQPSDSCQEY 217
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Query: 428 GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLE 487
G LF + D E D A+R + + YLH + HRDI N+LL+ +
Sbjct: 89 GELFDRIEPDIGMPEPD-AQR--FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 142
Query: 488 AFVADFGTARLLHADSSNQTL--LAGSYGYIAPE-LAYTMVMTEKYDVYSFGVVTLEVLM 544
++DFG A + ++ + L + G+ Y+APE L E DV+S G+V +L
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 545 GKHPRDLHSTLSSSY 559
G+ P D S Y
Sbjct: 203 GELPWDQPSDSXQEY 217
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 79
Query: 429 SLFRIL--------------------------HNDAEAVE--LDWAKRVNIVKAMAHALA 460
+ R+L H D + L+W V I K M
Sbjct: 80 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 133
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 134 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 79
Query: 429 SLFRIL--------------------------HNDAEAVE--LDWAKRVNIVKAMAHALA 460
+ R+L H D + L+W V I K M
Sbjct: 80 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 133
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 134 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 77
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 78 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 131
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 132 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 425 MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS 484
M +GSL L +D E + K ++ +A +A++ + +HRD+ + NIL+++
Sbjct: 264 MAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSA 319
Query: 485 KLEAFVADFGTARLLHADSSNQTLLAGSY---GYIAPELAYTMVMTEKYDVYSFGVVTLE 541
L +ADFG AR++ + + T G+ + APE T K DV+SFG++ +E
Sbjct: 320 SLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLME 377
Query: 542 VL 543
++
Sbjct: 378 IV 379
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 28/194 (14%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
+G G+YG V K + + GR+ A+KK + +++ + R E ++L Q+ +L +L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR-EIKLLKQLRHENLVNLLE 91
Query: 435 ----------------HNDAEAVEL-----DWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
H + +EL D+ + + + + + H S +++HR
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH---SHNIIHR 148
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK-YDV 532
DI NIL++ + DFG AR L A + Y APEL V K DV
Sbjct: 149 DIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDV 208
Query: 533 YSFGVVTLEVLMGK 546
++ G + E+ MG+
Sbjct: 209 WAIGCLVTEMFMGE 222
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 79
Query: 429 SLFRIL--------------------------HNDAEAVE--LDWAKRVNIVKAMAHALA 460
+ R+L H D + L+W V I K M
Sbjct: 80 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 133
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 134 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 77
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 78 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 131
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 132 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 81
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 82 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 135
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 136 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 80
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 81 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 134
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 135 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 87
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 88 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 141
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 142 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 198
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 199 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 79
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 80 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 133
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 134 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 10/131 (7%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
VL + G LF + E D A + VK + A+AYLH + +VHRD+ N+
Sbjct: 126 VLELVTGGELFDRIVEKGYYSERDAA---DAVKQILEAVAYLHEN---GIVHRDLKPENL 179
Query: 481 LLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGV 537
L + +ADFG ++++ +T+ G+ GY APE+ + D++S G+
Sbjct: 180 LYATPAPDAPLKIADFGLSKIVEHQVLMKTV-CGTPGYCAPEILRGCAYGPEVDMWSVGI 238
Query: 538 VTLEVLMGKHP 548
+T +L G P
Sbjct: 239 ITYILLCGFEP 249
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 84
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 85 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 138
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 139 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 77
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 78 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 131
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 132 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 36/202 (17%)
Query: 377 IGTGAYGSVY--KAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQ-------------- 420
+G G +G V + QL +V A+K LN + L + + E Q
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKV-AVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLY 77
Query: 421 -----------VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
V+ + G LF + E++ A+R + + + A+ Y H
Sbjct: 78 QVISTPTDFFMVMEYVSGGELFDYICKHGRVEEME-ARR--LFQQILSAVDYCHRHM--- 131
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTE 528
VVHRD+ N+LL++ + A +ADFG + ++ +D GS Y APE ++ +
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRTSCGSPNYAAPEVISGRLYAGP 190
Query: 529 KYDVYSFGVVTLEVLMGKHPRD 550
+ D++S GV+ +L G P D
Sbjct: 191 EVDIWSCGVILYALLCGTLPFD 212
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 80
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 81 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 134
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 135 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 80
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 81 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 134
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 135 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 83
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 84 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 137
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 138 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 194
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 195 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 71
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 72 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 125
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 126 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 182
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 183 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 78
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 79 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 132
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 133 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 190 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 431 FRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFV 490
F HN E +L V+ +A + YL S +HRD+++ N+L+ +
Sbjct: 137 FNPSHNPEE--QLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKI 191
Query: 491 ADFGTARLLHADSSNQTLLAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
ADFG AR +H + G ++APE + + T + DV+SFGV+ E+
Sbjct: 192 ADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 77
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 78 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 131
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 132 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 80
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 81 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 134
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 135 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 84
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 85 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 138
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 139 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 79
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 80 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 133
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 134 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 102
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 103 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 156
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 157 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 213
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 214 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 68/145 (46%), Gaps = 15/145 (10%)
Query: 406 TEELAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHD 465
+ L F+ + N ++ +++ F+ E + +A ++I L +LH
Sbjct: 92 VDRLYFVMEYVNGGDLMYHIQQVGKFK------EPQAVFYAAEISI------GLFFLH-- 137
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
+++RD+ +N++L+S+ +ADFG + D G+ YIAPE+
Sbjct: 138 -KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQP 196
Query: 526 MTEKYDVYSFGVVTLEVLMGKHPRD 550
+ D +++GV+ E+L G+ P D
Sbjct: 197 YGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 77
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 78 HVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 131
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 132 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 89/217 (41%), Gaps = 56/217 (25%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQV--LSQMERGSLFRIL 434
IG G YG+VYK L + R A+K + A ++F NE + + ME ++ R +
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFS------FANRQNFINEKNIYRVPLMEHDNIARFI 73
Query: 435 HNDAEAVE--------------------------LDWAKRVNIVKAMAHALAYLHHDC-- 466
D DW + ++ LAYLH +
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPR 133
Query: 467 ----SPSVVHRDISSNNILLNSKLEAFVADFGTA------RLLHADSSNQTLLA--GSYG 514
P++ HRD++S N+L+ + ++DFG + RL+ + ++ G+
Sbjct: 134 GDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIR 193
Query: 515 YIAPELAYTMV-------MTEKYDVYSFGVVTLEVLM 544
Y+APE+ V ++ D+Y+ G++ E+ M
Sbjct: 194 YMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM 230
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 41/207 (19%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 74
Query: 429 SLFRIL----HNDAEAVE--------LDWAKR----------VNIVKAMAHALAYLHHDC 466
+ R+L + + + LD+ + +N +A + YL
Sbjct: 75 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLE--- 131
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAPELAYTM 524
+VHRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 132 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 191
Query: 525 VMTEKYDVYSFGVVTLEVL-MGKHPRD 550
+ T + DV+S+GV E++ G P D
Sbjct: 192 IYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+G+GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 78
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 79 HVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 132
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 133 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 190 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 77/179 (43%), Gaps = 17/179 (9%)
Query: 216 LSRLTSLKILILAQNQLSGLP----QEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSY 271
L LT+L LIL NQL LP ++ NLK L+L++ N + ++L+Y
Sbjct: 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVE---NQLQSLPDGVFDKLTNLTY 137
Query: 272 LDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSI 331
L+L+ NQ S +LT L LDLS N+L + L L L N +K
Sbjct: 138 LNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVP 197
Query: 332 PGEITKLSRLDYLNLSGNKLSGRVP-------YSNKH---LSSMPTPRKIDSKYCIGTG 380
G +L+ L Y+ L N P + NKH + + DS C G+G
Sbjct: 198 DGVFDRLTSLQYIWLHDNPWDCTCPGIRYLSEWINKHSGVVRNSAGSVAPDSAKCSGSG 256
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 124 NFSCFPNLESLRILAYYDGFTGSIPSEI-SALSKLQLLDLSSNRLRG-------RLTNLN 175
+ S L +L L S+P+ + L+ L+ L L N+L+ +LTNL
Sbjct: 77 DISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLT 136
Query: 176 YMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGL 235
Y++L+ N L L L NL ELD+ N L +LT LK L L QNQL +
Sbjct: 137 YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSV 196
Query: 236 PQEI 239
P +
Sbjct: 197 PDGV 200
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 22/141 (15%)
Query: 227 LAQNQLSGLPQEIGN------------LKNLMLLDVGNN---DIIGPIPSTLGLFSDLSY 271
+ QN+L+ + Q I N L N+ L +G N DI S L ++L+Y
Sbjct: 35 VTQNELNSIDQIIANNSDIKSVQGIQYLPNVRYLALGGNKLHDI-----SALKELTNLTY 89
Query: 272 LDLSCNQFNSSIPNEL-TRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGS 330
L L+ NQ S+PN + +LT L L L N+L + +LT+L+L++N ++
Sbjct: 90 LILTGNQL-QSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSL 148
Query: 331 IPGEITKLSRLDYLNLSGNKL 351
G KL+ L L+LS N+L
Sbjct: 149 PKGVFDKLTNLTELDLSYNQL 169
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 15/142 (10%)
Query: 407 EELAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
+ L F+ F N ++ +++ F D A+ + AL +LH
Sbjct: 97 DRLFFVMEFVNGGDLMFHIQKSRRF------------DEARARFYAAEIISALMFLH--- 141
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVM 526
+++RD+ +N+LL+ + +ADFG + + G+ YIAPE+ M+
Sbjct: 142 DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLY 201
Query: 527 TEKYDVYSFGVVTLEVLMGKHP 548
D ++ GV+ E+L G P
Sbjct: 202 GPAVDWWAMGVLLYEMLCGHAP 223
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 79/201 (39%), Gaps = 30/201 (14%)
Query: 370 KIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER 427
+I+ CIG G +G V++ P A+ + F EA + Q +
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 428 GSLFRILHNDAE----------------------AVELDWAKRVNIVKAMAHALAYLHHD 465
+ +++ E LD A + ++ ALAYL
Sbjct: 71 PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE-- 128
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS--YGYIAPELAYT 523
S VHRDI++ N+L++S + DFG +R + DS+ G ++APE
Sbjct: 129 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLPIKWMAPESINF 186
Query: 524 MVMTEKYDVYSFGVVTLEVLM 544
T DV+ FGV E+LM
Sbjct: 187 RRFTSASDVWMFGVCMWEILM 207
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 15/142 (10%)
Query: 407 EELAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
+ L F+ + N ++ +++ F+ H A E+ A L +L
Sbjct: 415 DRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEI------------AIGLFFLQ--- 459
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVM 526
S +++RD+ +N++L+S+ +ADFG + D G+ YIAPE+
Sbjct: 460 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPY 519
Query: 527 TEKYDVYSFGVVTLEVLMGKHP 548
+ D ++FGV+ E+L G+ P
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAP 541
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 377 IGTGAYGSVY--KAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQ-------------- 420
+G G +G V K +L G A+K LN + L + R E Q
Sbjct: 24 LGVGTFGKVKVGKHEL-TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLY 82
Query: 421 -----------VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
V+ + G LF + + LD + + + + + Y H
Sbjct: 83 QVISTPSDIFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYCHRHM--- 136
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTE 528
VVHRD+ N+LL++ + A +ADFG + ++ +D GS Y APE ++ +
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRXSCGSPNYAAPEVISGRLYAGP 195
Query: 529 KYDVYSFGVVTLEVLMGKHPRD 550
+ D++S GV+ +L G P D
Sbjct: 196 EVDIWSSGVILYALLCGTLPFD 217
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 15/142 (10%)
Query: 407 EELAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
+ L F+ + N ++ +++ F+ H A E+ A L +L
Sbjct: 94 DRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEI------------AIGLFFLQ--- 138
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVM 526
S +++RD+ +N++L+S+ +ADFG + D G+ YIAPE+
Sbjct: 139 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPY 198
Query: 527 TEKYDVYSFGVVTLEVLMGKHP 548
+ D ++FGV+ E+L G+ P
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAP 220
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 93/229 (40%), Gaps = 57/229 (24%)
Query: 369 RKIDSKYCIGTGAYGSVYKAQLPN------GRVFALKKLNSPETEELAFIRSFRNEAQVL 422
R I K +G GA+G V+ A+ N + A+K L P LA + F+ EA++L
Sbjct: 15 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT---LAARKDFQREAELL 71
Query: 423 SQMERGSLFRIL-----------------HNDAEAV---------------------ELD 444
+ ++ + + H D EL
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 445 WAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS- 503
++ ++I +A + YL S VHRD+++ N L+ + L + DFG +R +++
Sbjct: 132 LSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY 188
Query: 504 ---SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
T+L ++ PE T + DV+SFGV+ E+ GK P
Sbjct: 189 YRVGGHTML--PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 43/233 (18%)
Query: 351 LSGRVPYSNKHLSSMPTPRKIDSKYCIGTGAYGSVYKA-QLPNGR-------VFALKKLN 402
+SG P N+ L + ++ +G+GA+G+VYK +P+G + L++
Sbjct: 1 MSGAAP--NQALLRILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT 58
Query: 403 SPETEELAFIRSFRNEAQVLSQMERGSLFRIL----------------------HNDAEA 440
SP+ + +EA V++ + + R+L H
Sbjct: 59 SPKAN-----KEILDEAYVMAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENR 113
Query: 441 VELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500
L +N +A ++YL +VHRD+++ N+L+ S + DFG ARLL
Sbjct: 114 GRLGSQDLLNWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLD 170
Query: 501 ADSSNQTLLAGSY--GYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
D + G ++A E T + DV+S+GV E++ G P D
Sbjct: 171 IDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 23/172 (13%)
Query: 443 LDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD 502
LD + I++ + L YLH + +HRD+ + NILL +ADFG + L
Sbjct: 118 LDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATG 174
Query: 503 -----SSNQTLLAGSYGYIAPELAYTMVMTE-KYDVYSFGVVTLEVLMGKHPRDLHSTLS 556
+ + G+ ++APE+ + + K D++SFG+ +E+ G P
Sbjct: 175 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP-------Y 227
Query: 557 SSYDPKIMLIDVLDQRLPPPVDRKVI-QDILLVSTISFA-----CLQSNPKS 602
Y P +L+ L Q PP ++ V +++L SF CLQ +P+
Sbjct: 228 HKYPPMKVLMLTL-QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEK 278
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 41/198 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHN 436
+G GA+G VYKAQ V A K+ ++EE + + E +L+ + ++ ++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCDHPNIVKLLDA 102
Query: 437 -------------------DAEAVELDW---AKRVNIV-KAMAHALAYLHHDCSPSVVHR 473
DA +EL+ ++ +V K AL YLH + ++HR
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTE----- 528
D+ + NIL + +ADFG + + G+ ++APE+ VM E
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEV----VMCETSKDR 215
Query: 529 ----KYDVYSFGVVTLEV 542
K DV+S G+ +E+
Sbjct: 216 PYDYKADVWSLGITLIEM 233
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKA-MAHALAYLHHDCSPSVVHRDISSNN 479
VL + G LF L + +E R A +A AL YLH S ++V+RD+ N
Sbjct: 117 VLDYINGGELFYHLQRERCFLE----PRARFYAAEIASALGYLH---SLNIVYRDLKPEN 169
Query: 480 ILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVT 539
ILL+S+ + DFG + +S + G+ Y+APE+ + D + G V
Sbjct: 170 ILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVL 229
Query: 540 LEVLMGKHP 548
E+L G P
Sbjct: 230 YEMLYGLPP 238
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 36/202 (17%)
Query: 377 IGTGAYGSVY--KAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQ-------------- 420
+G G +G V + QL +V A+K LN + L + + E Q
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKV-AVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLY 77
Query: 421 -----------VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
V+ + G LF + E++ A+R + + + A+ Y H
Sbjct: 78 QVISTPTDFFMVMEYVSGGELFDYICKHGRVEEME-ARR--LFQQILSAVDYCHRHM--- 131
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTE 528
VVHRD+ N+LL++ + A +ADFG + ++ +D GS Y APE ++ +
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRDSCGSPNYAAPEVISGRLYAGP 190
Query: 529 KYDVYSFGVVTLEVLMGKHPRD 550
+ D++S GV+ +L G P D
Sbjct: 191 EVDIWSCGVILYALLCGTLPFD 212
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 73/158 (46%), Gaps = 12/158 (7%)
Query: 395 VFALKKLNSPETEEL-AFIRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVK 453
V LK+L+ P +L F RN V+ G LF + + E+D A I+K
Sbjct: 72 VAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA---VIMK 128
Query: 454 AMAHALAYLHHDCSPSVVHRDISSNNILLNSK-LEAF--VADFGTARLLHADSSNQTLLA 510
+ YLH ++VHRD+ N+LL SK +A + DFG + + L
Sbjct: 129 QVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLG 185
Query: 511 GSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
+Y YIAPE+ EK DV+S GV+ +L G P
Sbjct: 186 TAY-YIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPP 221
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 23/172 (13%)
Query: 443 LDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD 502
LD + I++ + L YLH + +HRD+ + NILL +ADFG + L
Sbjct: 113 LDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATG 169
Query: 503 -----SSNQTLLAGSYGYIAPELAYTMVMTE-KYDVYSFGVVTLEVLMGKHPRDLHSTLS 556
+ + G+ ++APE+ + + K D++SFG+ +E+ G P
Sbjct: 170 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP-------Y 222
Query: 557 SSYDPKIMLIDVLDQRLPPPVDRKVI-QDILLVSTISFA-----CLQSNPKS 602
Y P +L+ L Q PP ++ V +++L SF CLQ +P+
Sbjct: 223 HKYPPMKVLMLTL-QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEK 273
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Query: 398 LKKLNSPETEELAFIRSFRNEAQVLSQMERG-SLFRILHNDAEAVELDWAKRVNIVKAMA 456
LKKL+ P +L I + ++ ++ G LF + E D A+ I+K +
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVF 131
Query: 457 HALAYLHHDCSPSVVHRDISSNNILLNSK---LEAFVADFGTARLLHADSSNQTLLAGSY 513
+ Y+H ++VHRD+ NILL SK + + DFG + ++ + + +Y
Sbjct: 132 SGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY 188
Query: 514 GYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
YIAPE+ EK DV+S GV+ +L G P
Sbjct: 189 -YIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Query: 398 LKKLNSPETEELAFIRSFRNEAQVLSQMERG-SLFRILHNDAEAVELDWAKRVNIVKAMA 456
LKKL+ P +L I + ++ ++ G LF + E D A+ I+K +
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVF 131
Query: 457 HALAYLHHDCSPSVVHRDISSNNILLNSK---LEAFVADFGTARLLHADSSNQTLLAGSY 513
+ Y+H ++VHRD+ NILL SK + + DFG + ++ + + +Y
Sbjct: 132 SGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY 188
Query: 514 GYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
YIAPE+ EK DV+S GV+ +L G P
Sbjct: 189 -YIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 39/201 (19%)
Query: 377 IGTGAYGSVYKAQ-LPNGRVFALKKLNSPETE----------ELAFIRSFRNEAQVLSQM 425
IG G++G+VY A+ + N V A+KK++ + E+ F++ R+ +
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTI---Q 118
Query: 426 ERGSLFR----------ILHNDAEAVELDWAKRVNI-VKAMAHA----LAYLHHDCSPSV 470
RG R L + ++ +E+ + + A+ H LAYLH S ++
Sbjct: 119 YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNM 175
Query: 471 VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTE-- 528
+HRD+ + NILL+ + DFG+A ++ + G+ ++APE+ M +
Sbjct: 176 IHRDVKAGNILLSEPGLVKLGDFGSASIM----APANXFVGTPYWMAPEVILAMDEGQYD 231
Query: 529 -KYDVYSFGVVTLEVLMGKHP 548
K DV+S G+ +E+ K P
Sbjct: 232 GKVDVWSLGITCIELAERKPP 252
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 10/132 (7%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
+ ME GSL L + ++L K +++ +A +A++ + +HR++ + NI
Sbjct: 81 ITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRNLRAANI 136
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKYDVYSFGV 537
L++ L +ADFG ARL+ + + T G+ + APE T K DV+SFG+
Sbjct: 137 LVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 194
Query: 538 VTLEVLM-GKHP 548
+ E++ G+ P
Sbjct: 195 LLTEIVTHGRIP 206
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
V+ +A + YL S +HRD+++ N+L+ +ADFG AR +H +
Sbjct: 138 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 509 LAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
G ++APE + + T + DV+SFGV+ E+
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 231
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
V+ +A + YL S +HRD+++ N+L+ +ADFG AR +H +
Sbjct: 142 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 509 LAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
G ++APE + + T + DV+SFGV+ E+
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 235
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSK-LEAFVADFGTARLLHADSSNQTLLAGSY--- 513
L YLH S ++H D+ ++N+LL+S A + DFG A L D ++LL G Y
Sbjct: 197 GLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPG 253
Query: 514 --GYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++APE+ K DV+S + L +L G HP
Sbjct: 254 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 435 HNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFG 494
HN E +L V+ +A + YL S +HRD+++ N+L+ +ADFG
Sbjct: 182 HNPEE--QLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFG 236
Query: 495 TARLLHADSSNQTLLAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
AR +H + G ++APE + + T + DV+SFGV+ E+ +G P
Sbjct: 237 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
V+ +A + YL S +HRD+++ N+L+ +ADFG AR +H +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 509 LAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
G ++APE + + T + DV+SFGV+ E+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 39/201 (19%)
Query: 377 IGTGAYGSVYKAQ-LPNGRVFALKKLNSPETE----------ELAFIRSFRNEAQVLSQM 425
IG G++G+VY A+ + N V A+KK++ + E+ F++ R+ +
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTI---Q 79
Query: 426 ERGSLFR----------ILHNDAEAVELDWAKRVNI-VKAMAHA----LAYLHHDCSPSV 470
RG R L + ++ +E+ + + A+ H LAYLH S ++
Sbjct: 80 YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNM 136
Query: 471 VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTE-- 528
+HRD+ + NILL+ + DFG+A ++ + G+ ++APE+ M +
Sbjct: 137 IHRDVKAGNILLSEPGLVKLGDFGSASIM----APANXFVGTPYWMAPEVILAMDEGQYD 192
Query: 529 -KYDVYSFGVVTLEVLMGKHP 548
K DV+S G+ +E+ K P
Sbjct: 193 GKVDVWSLGITCIELAERKPP 213
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 34/202 (16%)
Query: 374 KYCIGTGAYGSVYKAQ-LPNGRVFALK-----KLNSPETE---ELAFIRSFRNE------ 418
K +GTGA+ V A+ G++FA+K L E+ E+A +R ++E
Sbjct: 27 KETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALE 86
Query: 419 ---------AQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
V+ + G LF + E D + +++ + A+ YLH
Sbjct: 87 DIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS---TLIRQVLDAVYYLHR---MG 140
Query: 470 VVHRDISSNNILLNSKLEA---FVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVM 526
+VHRD+ N+L S+ E ++DFG +++ + G+ GY+APE+
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFGLSKM-EGKGDVMSTACGTPGYVAPEVLAQKPY 199
Query: 527 TEKYDVYSFGVVTLEVLMGKHP 548
++ D +S GV+ +L G P
Sbjct: 200 SKAVDCWSIGVIAYILLCGYPP 221
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
V+ +A + YL S +HRD+++ N+L+ +ADFG AR +H +
Sbjct: 145 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 509 LAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
G ++APE + + T + DV+SFGV+ E+
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 238
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
V+ +A + YL S +HRD+++ N+L+ +ADFG AR +H +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 509 LAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
G ++APE + + T + DV+SFGV+ E+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
V+ +A + YL S +HRD+++ N+L+ +ADFG AR +H +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 509 LAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
G ++APE + + T + DV+SFGV+ E+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
V+ +A + YL S +HRD+++ N+L+ +ADFG AR +H +
Sbjct: 146 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 509 LAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
G ++APE + + T + DV+SFGV+ E+
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 239
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 38/200 (19%)
Query: 377 IGTGAYGSVY-KAQLPNGRVFALKKL-------NSPETEELAFIRSFRNE---------- 418
+G+GA+ V+ Q G++FALK + +S E+A ++ ++E
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 419 -----AQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
V+ + G LF + E D + +++ + A+ YLH + +VHR
Sbjct: 77 STTHYYLVMQLVSGGELFDRILERGVYTEKDASL---VIQQVLSAVKYLHEN---GIVHR 130
Query: 474 DISSNNILL-----NSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTE 528
D+ N+L NSK+ + DFG +++ + + G+ GY+APE+ ++
Sbjct: 131 DLKPENLLYLTPEENSKI--MITDFGLSKM--EQNGIMSTACGTPGYVAPEVLAQKPYSK 186
Query: 529 KYDVYSFGVVTLEVLMGKHP 548
D +S GV+T +L G P
Sbjct: 187 AVDCWSIGVITYILLCGYPP 206
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 79/201 (39%), Gaps = 30/201 (14%)
Query: 370 KIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER 427
+I+ CIG G +G V++ P A+ + F EA + Q +
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 428 GSLFRILHNDAE----------------------AVELDWAKRVNIVKAMAHALAYLHHD 465
+ +++ E LD A + ++ ALAYL
Sbjct: 71 PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE-- 128
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS--YGYIAPELAYT 523
S VHRDI++ N+L++S + DFG +R + DS+ G ++APE
Sbjct: 129 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 186
Query: 524 MVMTEKYDVYSFGVVTLEVLM 544
T DV+ FGV E+LM
Sbjct: 187 RRFTSASDVWMFGVCMWEILM 207
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 41/198 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHN 436
+G GA+G VYKAQ V A K+ ++EE + + E +L+ + ++ ++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCDHPNIVKLLDA 102
Query: 437 -------------------DAEAVELDW---AKRVNIV-KAMAHALAYLHHDCSPSVVHR 473
DA +EL+ ++ +V K AL YLH + ++HR
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTE----- 528
D+ + NIL + +ADFG + + G+ ++APE+ VM E
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEV----VMCETSKDR 215
Query: 529 ----KYDVYSFGVVTLEV 542
K DV+S G+ +E+
Sbjct: 216 PYDYKADVWSLGITLIEM 233
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 40/213 (18%)
Query: 370 KIDSKY-C---IGTGAYGSVYKAQ-LPNG-RVFALKKLNSPETEELAFIRSFRNEA--QV 421
+ D +Y C IG GAYG V+KA+ L NG R ALK++ EE + + R A +
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 422 LSQMERGSLFRIL------HNDAEA--------VELDWAKRVNIVKA------------- 454
L E ++ R+ D E V+ D ++ V
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 455 -MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY 513
+ L +LH S VVHRD+ NIL+ S + +ADFG AR+ + +++ +
Sbjct: 128 QLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW 184
Query: 514 GYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGK 546
Y APE+ D++S G + E+ K
Sbjct: 185 -YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 41/198 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHN 436
+G GA+G VYKAQ V A K+ ++EE + + E +L+ + ++ ++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCDHPNIVKLLDA 102
Query: 437 -------------------DAEAVELDW---AKRVNIV-KAMAHALAYLHHDCSPSVVHR 473
DA +EL+ ++ +V K AL YLH + ++HR
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTE----- 528
D+ + NIL + +ADFG + + G+ ++APE+ VM E
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEV----VMCETSKDR 215
Query: 529 ----KYDVYSFGVVTLEV 542
K DV+S G+ +E+
Sbjct: 216 PYDYKADVWSLGITLIEM 233
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 48/219 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
PR + Y IG GAYG V A L RV A+KK+ SP + R+ R E ++L +
Sbjct: 27 PRYTNLSY-IGEGAYGMVCSAYDNLNKVRV-AIKKI-SPFEHQTYCQRTLR-EIKILLRF 82
Query: 426 ERGSLFRILHNDA-EAVELDWAKRVNIVKAMAH--------------------------A 458
++ I ND A ++ K V IV+ +
Sbjct: 83 RHENIIGI--NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRG 140
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGY 515
L Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 141 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 516 IAPELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 79/201 (39%), Gaps = 30/201 (14%)
Query: 370 KIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER 427
+I+ CIG G +G V++ P A+ + F EA + Q +
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 428 GSLFRILHNDAE----------------------AVELDWAKRVNIVKAMAHALAYLHHD 465
+ +++ E LD A + ++ ALAYL
Sbjct: 71 PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE-- 128
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS--YGYIAPELAYT 523
S VHRDI++ N+L++S + DFG +R + DS+ G ++APE
Sbjct: 129 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 186
Query: 524 MVMTEKYDVYSFGVVTLEVLM 544
T DV+ FGV E+LM
Sbjct: 187 RRFTSASDVWMFGVCMWEILM 207
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 412 IRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+RS + VL M+ G L + N+ + + +A + YL S V
Sbjct: 119 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFV 173
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADS----SNQTLLAGSYGYIAPELAYTMVMT 527
HRD+++ N +L+ K VADFG AR ++ N+T ++A E T T
Sbjct: 174 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 233
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
K DV+SFGV+ E++ P
Sbjct: 234 TKSDVWSFGVLLWELMTRGAP 254
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 50/224 (22%)
Query: 369 RKIDSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER 427
RK + +G GAYG V+K+ G V A+KK+ R+FR E +L+++
Sbjct: 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSG 67
Query: 428 GS-------------------LFRILHNDAEAVE----LDWAKRVNIVKAMAHALAYLHH 464
+F + D AV L+ + +V + + YLH
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLH- 126
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTAR--------------LLHADSSN----Q 506
S ++HRD+ +NILLN++ VADFG +R ++ ++ N Q
Sbjct: 127 --SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 507 TLL---AGSYGYIAPE-LAYTMVMTEKYDVYSFGVVTLEVLMGK 546
+L + Y APE L + T+ D++S G + E+L GK
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 84/217 (38%), Gaps = 43/217 (19%)
Query: 364 SMPTPR-------KIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRS 414
+MP+ R +I+ CIG G +G V++ P A+ +
Sbjct: 378 TMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK 437
Query: 415 FRNEAQVLSQMERGSLFRILHNDAE----------------------AVELDWAKRVNIV 452
F EA + Q + + +++ E LD A +
Sbjct: 438 FLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 497
Query: 453 KAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS 512
++ ALAYL S VHRDI++ N+L++S + DFG +R + + T S
Sbjct: 498 YQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME----DSTYYKAS 550
Query: 513 YG-----YIAPELAYTMVMTEKYDVYSFGVVTLEVLM 544
G ++APE T DV+ FGV E+LM
Sbjct: 551 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 79/201 (39%), Gaps = 30/201 (14%)
Query: 370 KIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER 427
+I+ CIG G +G V++ P A+ + F EA + Q +
Sbjct: 39 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 98
Query: 428 GSLFRILHNDAE----------------------AVELDWAKRVNIVKAMAHALAYLHHD 465
+ +++ E LD A + ++ ALAYL
Sbjct: 99 PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE-- 156
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS--YGYIAPELAYT 523
S VHRDI++ N+L++S + DFG +R + DS+ G ++APE
Sbjct: 157 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 214
Query: 524 MVMTEKYDVYSFGVVTLEVLM 544
T DV+ FGV E+LM
Sbjct: 215 RRFTSASDVWMFGVCMWEILM 235
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 48/219 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
PR + Y IG GAYG V A L RV A+KK+ SP + R+ R E ++L +
Sbjct: 27 PRYTNLSY-IGEGAYGMVCSAYDNLNKVRV-AIKKI-SPFEHQTYCQRTLR-EIKILLRF 82
Query: 426 ERGSLFRILHNDA-EAVELDWAKRVNIVKAMAH--------------------------A 458
++ I ND A ++ K V IV+ +
Sbjct: 83 RHENIIGI--NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGY 515
L Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 141 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 197
Query: 516 IAPELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 48/219 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
PR + Y IG GAYG V A L RV A+KK+ SP + R+ R E ++L +
Sbjct: 28 PRYTNLSY-IGEGAYGMVCSAYDNLNKVRV-AIKKI-SPFEHQTYCQRTLR-EIKILLRF 83
Query: 426 ERGSLFRILHNDA-EAVELDWAKRVNIVKAMAH--------------------------A 458
++ I ND A ++ K V IV+ +
Sbjct: 84 RHENIIGI--NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 141
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGY 515
L Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 142 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 198
Query: 516 IAPELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 79/201 (39%), Gaps = 30/201 (14%)
Query: 370 KIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER 427
+I+ CIG G +G V++ P A+ + F EA + Q +
Sbjct: 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 75
Query: 428 GSLFRILHNDAE----------------------AVELDWAKRVNIVKAMAHALAYLHHD 465
+ +++ E LD A + ++ ALAYL
Sbjct: 76 PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE-- 133
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS--YGYIAPELAYT 523
S VHRDI++ N+L++S + DFG +R + DS+ G ++APE
Sbjct: 134 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 191
Query: 524 MVMTEKYDVYSFGVVTLEVLM 544
T DV+ FGV E+LM
Sbjct: 192 RRFTSASDVWMFGVCMWEILM 212
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 46/218 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETE--------ELAFIRSFRNE 418
PR + Y IG GAYG V A +V A+KK++ E + E+ + +FR+E
Sbjct: 25 PRYTNLSY-IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHE 83
Query: 419 ----------AQVLSQME---------RGSLFRILHNDAEAVELDWAKRVNIVKAMAHAL 459
A + QM+ L+++L + L + + L
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGL 139
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGYI 516
Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 140 KYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 517 APELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 40/222 (18%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ + A+K L E + F EA V+ +++ +
Sbjct: 13 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 68
Query: 430 LFRILHNDAEA------VE-------LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L +E LD+ + N + A L Y+ S ++
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESLAYNK 186
Query: 525 VMTEKYDVYSFGVVTLEVLM-------GKHPRDLHSTLSSSY 559
+ K DV++FGV+ E+ G P ++ L Y
Sbjct: 187 -FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY 227
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 73/159 (45%), Gaps = 12/159 (7%)
Query: 394 RVFALKKLNSPETEEL-AFIRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIV 452
V LK+L+ P +L F RN V+ G LF + + E+D A I+
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA---VIM 110
Query: 453 KAMAHALAYLHHDCSPSVVHRDISSNNILLNSK-LEAF--VADFGTARLLHADSSNQTLL 509
K + YLH ++VHRD+ N+LL SK +A + DFG + + L
Sbjct: 111 KQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL 167
Query: 510 AGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
+Y YIAPE+ EK DV+S GV+ +L G P
Sbjct: 168 GTAY-YIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPP 204
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 45/214 (21%)
Query: 377 IGTGAYGSVYKAQ-LPNGRVFALKKLN--SPETEEL---------------------AFI 412
+G G YG VYK + + G++ A+K ++ E EE+ AFI
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 413 RSFRN----EAQVLSQME---RGSLFRILHN-DAEAVELDWAKRVNIVKAMAHALAYLHH 464
+ +N + Q+ ME GS+ ++ N ++ +W I + + L++LH
Sbjct: 92 K--KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AYICREILRGLSHLHQ 147
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYT- 523
V+HRDI N+LL E + DFG + L + G+ ++APE+
Sbjct: 148 H---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 204
Query: 524 ----MVMTEKYDVYSFGVVTLEVLMGKHPR-DLH 552
K D++S G+ +E+ G P D+H
Sbjct: 205 ENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 238
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 412 IRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+RS + VL M+ G L + N+ + + +A + YL S V
Sbjct: 100 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFV 154
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADS----SNQTLLAGSYGYIAPELAYTMVMT 527
HRD+++ N +L+ K VADFG AR ++ N+T ++A E T T
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFT 214
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
K DV+SFGV+ E++ P
Sbjct: 215 TKSDVWSFGVLLWELMTRGAP 235
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 412 IRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+RS + VL M+ G L + N+ + + +A + YL S V
Sbjct: 120 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFV 174
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADS----SNQTLLAGSYGYIAPELAYTMVMT 527
HRD+++ N +L+ K VADFG AR ++ N+T ++A E T T
Sbjct: 175 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 234
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
K DV+SFGV+ E++ P
Sbjct: 235 TKSDVWSFGVLLWELMTRGAP 255
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 79/201 (39%), Gaps = 30/201 (14%)
Query: 370 KIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER 427
+I+ CIG G +G V++ P A+ + F EA + Q +
Sbjct: 14 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 73
Query: 428 GSLFRILHNDAE----------------------AVELDWAKRVNIVKAMAHALAYLHHD 465
+ +++ E LD A + ++ ALAYL
Sbjct: 74 PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE-- 131
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS--YGYIAPELAYT 523
S VHRDI++ N+L++S + DFG +R + DS+ G ++APE
Sbjct: 132 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 189
Query: 524 MVMTEKYDVYSFGVVTLEVLM 544
T DV+ FGV E+LM
Sbjct: 190 RRFTSASDVWMFGVCMWEILM 210
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 79/201 (39%), Gaps = 30/201 (14%)
Query: 370 KIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER 427
+I+ CIG G +G V++ P A+ + F EA + Q +
Sbjct: 13 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 72
Query: 428 GSLFRILHNDAE----------------------AVELDWAKRVNIVKAMAHALAYLHHD 465
+ +++ E LD A + ++ ALAYL
Sbjct: 73 PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE-- 130
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS--YGYIAPELAYT 523
S VHRDI++ N+L++S + DFG +R + DS+ G ++APE
Sbjct: 131 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 188
Query: 524 MVMTEKYDVYSFGVVTLEVLM 544
T DV+ FGV E+LM
Sbjct: 189 RRFTSASDVWMFGVCMWEILM 209
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 48/219 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
PR + Y IG GAYG V A L RV A+KK+ SP + R+ R E ++L +
Sbjct: 21 PRYTNLSY-IGEGAYGMVCSAYDNLNKVRV-AIKKI-SPFEHQTYCQRTLR-EIKILLRF 76
Query: 426 ERGSLFRILHNDA-EAVELDWAKRVNIVKAMAH--------------------------A 458
++ I ND A ++ K V IV+ +
Sbjct: 77 RHENIIGI--NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 134
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGY 515
L Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 135 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 516 IAPELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 48/219 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
PR + Y IG GAYG V A L RV A+KK+ SP + R+ R E ++L +
Sbjct: 28 PRYTNLSY-IGEGAYGMVCSAYDNLNKVRV-AIKKI-SPFEHQTYCQRTLR-EIKILLRF 83
Query: 426 ERGSLFRILHNDA-EAVELDWAKRVNIVKAMAH--------------------------A 458
++ I ND A ++ K V IV+ +
Sbjct: 84 RHENIIGI--NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 141
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGY 515
L Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 142 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 198
Query: 516 IAPELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 48/219 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
PR + Y IG GAYG V A L RV A+KK+ SP + R+ R E ++L +
Sbjct: 29 PRYTNLSY-IGEGAYGMVCSAYDNLNKVRV-AIKKI-SPFEHQTYCQRTLR-EIKILLRF 84
Query: 426 ERGSLFRILHNDA-EAVELDWAKRVNIVKAMAH--------------------------A 458
++ I ND A ++ K V IV+ +
Sbjct: 85 RHENIIGI--NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 142
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGY 515
L Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 143 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 199
Query: 516 IAPELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 200 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 238
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 48/219 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
PR + Y IG GAYG V A L RV A+KK+ SP + R+ R E ++L +
Sbjct: 20 PRYTNLSY-IGEGAYGMVCSAYDNLNKVRV-AIKKI-SPFEHQTYCQRTLR-EIKILLRF 75
Query: 426 ERGSLFRILHNDA-EAVELDWAKRVNIVKAMAH--------------------------A 458
++ I ND A ++ K V IV+ +
Sbjct: 76 RHENIIGI--NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 133
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGY 515
L Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 134 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 190
Query: 516 IAPELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 191 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 229
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 48/219 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
PR + Y IG GAYG V A L RV A+KK+ SP + R+ R E ++L +
Sbjct: 27 PRYTNLSY-IGEGAYGMVCSAYDNLNKVRV-AIKKI-SPFEHQTYCQRTLR-EIKILLRF 82
Query: 426 ERGSLFRILHNDA-EAVELDWAKRVNIVKAMAH--------------------------A 458
++ I ND A ++ K V IV+ +
Sbjct: 83 RHENIIGI--NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGY 515
L Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 141 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 516 IAPELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 46/218 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQME 426
PR + Y IG GAYG V A +V A+KK+ SP + R+ R E ++L +
Sbjct: 31 PRYTNLSY-IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLR-EIKILLRFR 87
Query: 427 RGSLFRILHNDA-EAVELDWAKRVNIVKAMAH--------------------------AL 459
++ I ND A ++ K V IV+ + L
Sbjct: 88 HENIIGI--NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 145
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGYI 516
Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 146 KYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 202
Query: 517 APELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 203 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 240
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 46/218 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQME 426
PR + Y IG GAYG V A +V A+KK+ SP + R+ R E ++L +
Sbjct: 23 PRYTNLSY-IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLR-EIKILLRFR 79
Query: 427 RGSLFRILHNDA-EAVELDWAKRVNIVKAMAH--------------------------AL 459
++ I ND A ++ K V IV+ + L
Sbjct: 80 HENIIGI--NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGYI 516
Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 138 KYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 517 APELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN--- 505
+ +V ++ + YL + VHRD+++ N+LL ++ A ++DFG ++ L AD +
Sbjct: 114 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKA 170
Query: 506 QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
QT + APE + K DV+SFGV+ E G+ P
Sbjct: 171 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 79/201 (39%), Gaps = 30/201 (14%)
Query: 370 KIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER 427
+I+ CIG G +G V++ P A+ + F EA + Q +
Sbjct: 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 67
Query: 428 GSLFRILHNDAE----------------------AVELDWAKRVNIVKAMAHALAYLHHD 465
+ +++ E LD A + ++ ALAYL
Sbjct: 68 PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE-- 125
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS--YGYIAPELAYT 523
S VHRDI++ N+L++S + DFG +R + DS+ G ++APE
Sbjct: 126 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 183
Query: 524 MVMTEKYDVYSFGVVTLEVLM 544
T DV+ FGV E+LM
Sbjct: 184 RRFTSASDVWMFGVCMWEILM 204
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 37/196 (18%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 71 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKY-- 530
RD+ N+L+N++ +ADFG AR T + Y APE+ ++ KY
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI----LLGXKYYS 182
Query: 531 ---DVYSFGVVTLEVL 543
D++S G + E++
Sbjct: 183 TAVDIWSLGCIFAEMV 198
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 48/219 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
PR + Y IG GAYG V A L RV A+KK+ SP + R+ R E ++L +
Sbjct: 21 PRYTNLSY-IGEGAYGMVCSAYDNLNKVRV-AIKKI-SPFEHQTYCQRTLR-EIKILLRF 76
Query: 426 ERGSLFRILHNDA-EAVELDWAKRVNIVKAMAH--------------------------A 458
++ I ND A ++ K V IV+ +
Sbjct: 77 RHENIIGI--NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 134
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGY 515
L Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 135 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 516 IAPELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS---N 505
+ +V ++ + YL + VHRD+++ N+LL ++ A ++DFG ++ L AD +
Sbjct: 472 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528
Query: 506 QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
QT + APE + K DV+SFGV+ E G+ P
Sbjct: 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Query: 398 LKKLNSPETEELAFIRSFRNEAQVLSQMERG-SLFRILHNDAEAVELDWAKRVNIVKAMA 456
LKKL+ P +L I + ++ ++ G LF + E D A+ I+K +
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVF 131
Query: 457 HALAYLHHDCSPSVVHRDISSNNILLNSK---LEAFVADFGTARLLHADSSNQTLLAGSY 513
+ Y+H ++VHRD+ NILL SK + + DFG + ++ + + +Y
Sbjct: 132 SGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY 188
Query: 514 GYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
YIAPE+ EK DV+S GV+ +L G P
Sbjct: 189 -YIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 412 IRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+RS + VL M+ G L + N+ + + +A + YL S V
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFV 155
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADS----SNQTLLAGSYGYIAPELAYTMVMT 527
HRD+++ N +L+ K VADFG AR ++ N+T ++A E T T
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 215
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
K DV+SFGV+ E++ P
Sbjct: 216 TKSDVWSFGVLLWELMTRGAP 236
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 412 IRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+RS + VL M+ G L + N+ + + +A + YL S V
Sbjct: 93 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFV 147
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADS----SNQTLLAGSYGYIAPELAYTMVMT 527
HRD+++ N +L+ K VADFG AR ++ N+T ++A E T T
Sbjct: 148 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 207
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
K DV+SFGV+ E++ P
Sbjct: 208 TKSDVWSFGVLLWELMTRGAP 228
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 40/213 (18%)
Query: 370 KIDSKY-C---IGTGAYGSVYKAQ-LPNG-RVFALKKLNSPETEELAFIRSFRNEA--QV 421
+ D +Y C IG GAYG V+KA+ L NG R ALK++ EE + + R A +
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 422 LSQMERGSLFRIL------HNDAEA--------VELDWAKRVNIVKA------------- 454
L E ++ R+ D E V+ D ++ V
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 455 -MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY 513
+ L +LH S VVHRD+ NIL+ S + +ADFG AR+ + +++ +
Sbjct: 128 QLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW 184
Query: 514 GYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGK 546
Y APE+ D++S G + E+ K
Sbjct: 185 -YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 46/218 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQME 426
PR + Y IG GAYG V A +V A+KK+ SP + R+ R E ++L +
Sbjct: 23 PRYTNLSY-IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLR-EIKILLRFR 79
Query: 427 RGSLFRILHNDA-EAVELDWAKRVNIVKAMAH--------------------------AL 459
++ I ND A ++ K V IV+ + L
Sbjct: 80 HENIIGI--NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGYI 516
Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 138 KYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 517 APELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 28/189 (14%)
Query: 377 IGTGAYGSVYKAQ-LPNGRVFALKKLNSP------ETEELAFIRSFRNEAQ------VLS 423
+G G+YG V+K + +GR++A+K+ SP +LA + S Q +
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 424 QMERGSLFRIL----------HNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
E G + + H +A L A+ ++ ALA+LH S +VH
Sbjct: 125 AWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHL 181
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
D+ NI L + + DFG L + + + G Y+APEL T DV+
Sbjct: 182 DVKPANIFLGPRGRCKLGDFGLLVELGTAGAGE-VQEGDPRYMAPELLQGSYGTAA-DVF 239
Query: 534 SFGVVTLEV 542
S G+ LEV
Sbjct: 240 SLGLTILEV 248
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS---N 505
+ +V ++ + YL + VHRD+++ N+LL ++ A ++DFG ++ L AD +
Sbjct: 473 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 529
Query: 506 QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
QT + APE + K DV+SFGV+ E G+ P
Sbjct: 530 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 40/213 (18%)
Query: 370 KIDSKY-C---IGTGAYGSVYKAQ-LPNG-RVFALKKLNSPETEELAFIRSFRNEA--QV 421
+ D +Y C IG GAYG V+KA+ L NG R ALK++ EE + + R A +
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 422 LSQMERGSLFRIL------HNDAEA--------VELDWAKRVNIVKA------------- 454
L E ++ R+ D E V+ D ++ V
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 455 -MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY 513
+ L +LH S VVHRD+ NIL+ S + +ADFG AR+ + +++ +
Sbjct: 128 QLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW 184
Query: 514 GYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGK 546
Y APE+ D++S G + E+ K
Sbjct: 185 -YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 31/203 (15%)
Query: 372 DSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSL 430
D K +G GA+ V + G FA K +N+ + F + EA++ +++ ++
Sbjct: 32 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARICRKLQHPNI 90
Query: 431 FRI---------------------LHNDAEAVEL-DWAKRVNIVKAMAHALAYLHHDCSP 468
R+ L D A E A + ++ + ++AY H S
Sbjct: 91 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH---SN 147
Query: 469 SVVHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
+VHR++ N+LL SK + +ADFG A ++ DS AG+ GY++PE+
Sbjct: 148 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDP 206
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
++ D+++ GV+ +L+G P
Sbjct: 207 YSKPVDIWACGVILYILLVGYPP 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 46/218 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQME 426
PR + Y IG GAYG V A +V A+KK+ SP + R+ R E ++L +
Sbjct: 43 PRYTNLSY-IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLR-EIKILLRFR 99
Query: 427 RGSLFRILHNDA-EAVELDWAKRVNIVKAMAH--------------------------AL 459
++ I ND A ++ K V IV+ + L
Sbjct: 100 HENIIGI--NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 157
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGYI 516
Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 158 KYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 517 APELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 37/196 (18%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 78 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 133
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKY-- 530
RD+ N+L+N++ +ADFG AR T + Y APE+ ++ KY
Sbjct: 134 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI----LLGXKYYS 189
Query: 531 ---DVYSFGVVTLEVL 543
D++S G + E++
Sbjct: 190 TAVDIWSLGCIFAEMV 205
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 46/218 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQME 426
PR + Y IG GAYG V A +V A+KK+ SP + R+ R E ++L +
Sbjct: 25 PRYTNLSY-IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLR-EIKILLRFR 81
Query: 427 RGSLFRILHNDA-EAVELDWAKRVNIVKAMAH--------------------------AL 459
++ I ND A ++ K V IV+ + L
Sbjct: 82 HENIIGI--NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 139
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGYI 516
Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 140 KYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 517 APELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 48/219 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
PR + Y IG GAYG V A L RV A+KK+ SP + R+ R E ++L +
Sbjct: 27 PRYTNLSY-IGEGAYGMVCSAYDNLNKVRV-AIKKI-SPFEHQTYCQRTLR-EIKILLRF 82
Query: 426 ERGSLFRILHNDA-EAVELDWAKRVNIVKAMAH--------------------------A 458
++ I ND A ++ K V IV+ +
Sbjct: 83 RHENIIGI--NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGY 515
L Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 141 LKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 516 IAPELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 48/219 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
PR + Y IG GAYG V A L RV A+KK+ SP + R+ R E ++L +
Sbjct: 27 PRYTNLSY-IGEGAYGMVCSAYDNLNKVRV-AIKKI-SPFEHQTYXQRTLR-EIKILLRF 82
Query: 426 ERGSLFRILHNDA-EAVELDWAKRVNIVKAMAH--------------------------A 458
++ I ND A ++ K V IV+ +
Sbjct: 83 RHENIIGI--NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGY 515
L Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 141 LKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 516 IAPELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 412 IRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+RS + VL M+ G L + N+ + + +A + YL S V
Sbjct: 96 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFV 150
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADS----SNQTLLAGSYGYIAPELAYTMVMT 527
HRD+++ N +L+ K VADFG AR ++ N+T ++A E T T
Sbjct: 151 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 210
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
K DV+SFGV+ E++ P
Sbjct: 211 TKSDVWSFGVLLWELMTRGAP 231
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS---N 505
+ +V ++ + YL + VHRD+++ N+LL ++ A ++DFG ++ L AD +
Sbjct: 108 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 164
Query: 506 QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
QT + APE + K DV+SFGV+ E G+ P
Sbjct: 165 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS---N 505
+ +V ++ + YL + VHRD+++ N+LL ++ A ++DFG ++ L AD +
Sbjct: 128 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 184
Query: 506 QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
QT + APE + K DV+SFGV+ E G+ P
Sbjct: 185 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELAYT 523
S VHRD+++ NIL+ S+ +ADFG A+LL D + + APE
Sbjct: 129 SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSD 188
Query: 524 MVMTEKYDVYSFGVVTLEVL 543
+ + + DV+SFGVV E+
Sbjct: 189 NIFSRQSDVWSFGVVLYELF 208
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS---N 505
+ +V ++ + YL + VHRD+++ N+LL ++ A ++DFG ++ L AD +
Sbjct: 120 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 176
Query: 506 QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
QT + APE + K DV+SFGV+ E G+ P
Sbjct: 177 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSK-LEAFVADFGTARLLHADSSNQTLLAGSY--- 513
L YLH S ++H D+ ++N+LL+S A + DFG A L D + LL G Y
Sbjct: 178 GLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPG 234
Query: 514 --GYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++APE+ K DV+S + L +L G HP
Sbjct: 235 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS---N 505
+ +V ++ + YL + VHRD+++ N+LL ++ A ++DFG ++ L AD +
Sbjct: 114 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 170
Query: 506 QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
QT + APE + K DV+SFGV+ E G+ P
Sbjct: 171 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 412 IRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+RS + VL M+ G L + N+ + + +A + YL S V
Sbjct: 99 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFV 153
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADS----SNQTLLAGSYGYIAPELAYTMVMT 527
HRD+++ N +L+ K VADFG AR ++ N+T ++A E T T
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 213
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
K DV+SFGV+ E++ P
Sbjct: 214 TKSDVWSFGVLLWELMTRGAP 234
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 9/135 (6%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
V+ + G LF + E + + I++ + A++++H VVHRD+ N+
Sbjct: 84 VMELLNGGELFERIKKKKHFSETEAS---YIMRKLVSAVSHMH---DVGVVHRDLKPENL 137
Query: 481 LL---NSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGV 537
L N LE + DFG ARL D+ + Y APEL E D++S GV
Sbjct: 138 LFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGV 197
Query: 538 VTLEVLMGKHPRDLH 552
+ +L G+ P H
Sbjct: 198 ILYTMLSGQVPFQSH 212
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 412 IRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+RS + VL M+ G L + N+ + + +A + YL S V
Sbjct: 98 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFV 152
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADS----SNQTLLAGSYGYIAPELAYTMVMT 527
HRD+++ N +L+ K VADFG AR ++ N+T ++A E T T
Sbjct: 153 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 212
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
K DV+SFGV+ E++ P
Sbjct: 213 TKSDVWSFGVLLWELMTRGAP 233
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 83/204 (40%), Gaps = 34/204 (16%)
Query: 376 CIGTGAYGSVYKAQL----PNGRVFALKKLNSPE-TEELAFIRSFRNEAQVLSQMERGSL 430
+GTGAYG V+ + G+++A+K L ++ R E QVL + +
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 431 FRILH----------------NDAE-AVELDWAKRVN------IVKAMAHALAYLHHDCS 467
LH N E L +R V + AL +LH
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH---K 177
Query: 468 PSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL-LAGSYGYIAPELAY--TM 524
+++RDI NILL+S + DFG ++ AD + + G+ Y+AP++
Sbjct: 178 LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDS 237
Query: 525 VMTEKYDVYSFGVVTLEVLMGKHP 548
+ D +S GV+ E+L G P
Sbjct: 238 GHDKAVDWWSLGVLMYELLTGASP 261
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS---N 505
+ +V ++ + YL + VHRD+++ N+LL ++ A ++DFG ++ L AD +
Sbjct: 110 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 166
Query: 506 QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
QT + APE + K DV+SFGV+ E G+ P
Sbjct: 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 412 IRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+RS + VL M+ G L + N+ + + +A + YL S V
Sbjct: 100 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFV 154
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADS----SNQTLLAGSYGYIAPELAYTMVMT 527
HRD+++ N +L+ K VADFG AR ++ N+T ++A E T T
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 214
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
K DV+SFGV+ E++ P
Sbjct: 215 TKSDVWSFGVLLWELMTRGAP 235
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS---N 505
+ +V ++ + YL + VHRD+++ N+LL ++ A ++DFG ++ L AD +
Sbjct: 130 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 186
Query: 506 QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
QT + APE + K DV+SFGV+ E G+ P
Sbjct: 187 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS---N 505
+ +V ++ + YL + VHRD+++ N+LL ++ A ++DFG ++ L AD +
Sbjct: 130 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 186
Query: 506 QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
QT + APE + K DV+SFGV+ E G+ P
Sbjct: 187 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 71 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR T + Y APE L + D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 187 IWSLGCIFAEMV 198
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 33/198 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ + A+K L E + F EA V+ +++ +
Sbjct: 16 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 71
Query: 430 LFRILHNDAEA------VE-------LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L +E LD+ + N + A L Y+ S ++
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 132 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESLAYNK 189
Query: 525 VMTEKYDVYSFGVVTLEV 542
+ K DV++FGV+ E+
Sbjct: 190 -FSIKSDVWAFGVLLWEI 206
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 72 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 127
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR T + Y APE L + D
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 188 IWSLGCIFAEMV 199
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 412 IRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+RS + VL M+ G L + N+ + + +A + YL S V
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFV 155
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADS----SNQTLLAGSYGYIAPELAYTMVMT 527
HRD+++ N +L+ K VADFG AR ++ N+T ++A E T T
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 215
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
K DV+SFGV+ E++ P
Sbjct: 216 TKSDVWSFGVLLWELMTRGAP 236
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 70 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 125
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR T + Y APE L + D
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 186 IWSLGCIFAEMV 197
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 79/201 (39%), Gaps = 30/201 (14%)
Query: 370 KIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER 427
+I+ CIG G +G V++ P A+ + F EA + Q +
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 428 GSLFRILHNDAE----------------------AVELDWAKRVNIVKAMAHALAYLHHD 465
+ +++ E LD A + ++ ALAYL
Sbjct: 71 PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE-- 128
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS--YGYIAPELAYT 523
S VHRDI++ N+L+++ + DFG +R + DS+ G ++APE
Sbjct: 129 -SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 186
Query: 524 MVMTEKYDVYSFGVVTLEVLM 544
T DV+ FGV E+LM
Sbjct: 187 RRFTSASDVWMFGVCMWEILM 207
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 71 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR T + Y APE L + D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 187 IWSLGCIFAEMV 198
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 75 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 130
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR T + Y APE L + D
Sbjct: 131 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 190
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 191 IWSLGCIFAEMV 202
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 46/218 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQME 426
PR + Y IG GAYG V A +V A+KK+ SP + R+ R E ++L +
Sbjct: 23 PRYTNLSY-IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLR-EIKILLRFR 79
Query: 427 RGSLFRILHNDA-EAVELDWAKRVNIVKAMAH--------------------------AL 459
++ I ND A ++ K V IV+ + L
Sbjct: 80 HENIIGI--NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGYI 516
Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 138 KYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 517 APELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 70 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 125
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR T + Y APE L + D
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 186 IWSLGCIFAEMV 197
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 16/166 (9%)
Query: 398 LKKLNSPETEELAFIRSFRNEAQ---VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKA 454
L ++N P +L + +F+ E + +L + G LF L + E D V A
Sbjct: 80 LVEVNHPFIVKLHY--AFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED----VKFYLA 133
Query: 455 -MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY 513
+A AL +LH S +++RD+ NILL+ + + DFG ++ G+
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 190
Query: 514 GYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP---RDLHSTLS 556
Y+APE+ T+ D +SFGV+ E+L G P +D T++
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMT 236
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSK-LEAFVADFGTARLLHADSSNQTLLAGSY--- 513
L YLH + ++H D+ ++N+LL+S A + DFG A L D ++LL G Y
Sbjct: 162 GLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 218
Query: 514 --GYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++APE+ K D++S + L +L G HP
Sbjct: 219 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 33/198 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ + A+K L E + F EA V+ +++ +
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 70
Query: 430 LFRILHNDAEA------VE-------LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L +E LD+ + N + A L Y+ S ++
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNK 188
Query: 525 VMTEKYDVYSFGVVTLEV 542
+ K DV++FGV+ E+
Sbjct: 189 -FSIKSDVWAFGVLLWEI 205
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSK-LEAFVADFGTARLLHADSSNQTLLAGSY--- 513
L YLH + ++H D+ ++N+LL+S A + DFG A L D ++LL G Y
Sbjct: 176 GLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 232
Query: 514 --GYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++APE+ K D++S + L +L G HP
Sbjct: 233 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 78 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 133
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR T + Y APE L + D
Sbjct: 134 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 193
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 194 IWSLGCIFAEMV 205
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+ +GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 77
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 78 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 131
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 132 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
V+ +A + YL S +HRD+++ N+L+ +ADFG AR ++ +
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 509 LAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 31/203 (15%)
Query: 372 DSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSL 430
D K +G GA+ V + G FA K +N+ + F + EA++ +++ ++
Sbjct: 9 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARICRKLQHPNI 67
Query: 431 FRI---------------------LHNDAEAVEL-DWAKRVNIVKAMAHALAYLHHDCSP 468
R+ L D A E A + ++ + ++AY H S
Sbjct: 68 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH---SN 124
Query: 469 SVVHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
+VHR++ N+LL SK + +ADFG A ++ DS AG+ GY++PE+
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
++ D+++ GV+ +L+G P
Sbjct: 184 YSKPVDIWACGVILYILLVGYPP 206
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
V+ +A + YL S +HRD+++ N+L+ +ADFG AR ++ +
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 509 LAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 80/197 (40%), Gaps = 33/197 (16%)
Query: 377 IGTGAYGSVYKAQLP-----NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME----- 426
+G G +GSV + G + A+K+L ++ R F+ E Q+L +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ---RDFQREIQILKALHSDFIV 75
Query: 427 ----------RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDC-------SPS 469
R SL ++ D+ +R + L Y C S
Sbjct: 76 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 135
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELAYTMVM 526
VHRD+++ NIL+ S+ +ADFG A+LL D + + APE +
Sbjct: 136 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 195
Query: 527 TEKYDVYSFGVVTLEVL 543
+ + DV+SFGVV E+
Sbjct: 196 SRQSDVWSFGVVLYELF 212
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+ +GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 84
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 85 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 138
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 139 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 33/198 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ + A+K L E + F EA V+ +++ +
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 70
Query: 430 LFRILHNDAEA------VE-------LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L +E LD+ + N + A L Y+ S ++
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNK 188
Query: 525 VMTEKYDVYSFGVVTLEV 542
+ K DV++FGV+ E+
Sbjct: 189 -FSIKSDVWAFGVLLWEI 205
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 53/213 (24%)
Query: 377 IGTGAYGSVYKA-QLPNGR-------VFALKKLNSPETEELAFIRSFRNEAQVLSQMERG 428
+ +GA+G+VYK +P G + L++ SP+ + +EA V++ ++
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-----KEILDEAYVMASVDNP 84
Query: 429 SLFRIL--------------------------HND--AEAVELDWAKRVNIVKAMAHALA 460
+ R+L H D L+W V I K M
Sbjct: 85 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN---- 138
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY--GYIAP 518
YL +VHRD+++ N+L+ + + DFG A+LL A+ G ++A
Sbjct: 139 YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
E + T + DV+S+GV E++ G P D
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 84/217 (38%), Gaps = 43/217 (19%)
Query: 364 SMPTPR-------KIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRS 414
+MP+ R +I+ CIG G +G V++ P A+ +
Sbjct: 378 TMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK 437
Query: 415 FRNEAQVLSQMERGSLFRILHNDAE----------------------AVELDWAKRVNIV 452
F EA + Q + + +++ E LD A +
Sbjct: 438 FLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 497
Query: 453 KAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS 512
++ ALAYL S VHRDI++ N+L+++ + DFG +R + + T S
Sbjct: 498 YQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME----DSTYYKAS 550
Query: 513 YG-----YIAPELAYTMVMTEKYDVYSFGVVTLEVLM 544
G ++APE T DV+ FGV E+LM
Sbjct: 551 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 398 LKKLNSPETEELAFIRSFRNEAQ---VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKA 454
L ++N P +L + +F+ E + +L + G LF L + E D V A
Sbjct: 81 LVEVNHPFIVKLHY--AFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED----VKFYLA 134
Query: 455 -MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY 513
+A AL +LH S +++RD+ NILL+ + + DFG ++ G+
Sbjct: 135 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 191
Query: 514 GYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y+APE+ T+ D +SFGV+ E+L G P
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 80/197 (40%), Gaps = 33/197 (16%)
Query: 377 IGTGAYGSVYKAQLP-----NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME----- 426
+G G +GSV + G + A+K+L ++ R F+ E Q+L +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ---RDFQREIQILKALHSDFIV 74
Query: 427 ----------RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDC-------SPS 469
R SL ++ D+ +R + L Y C S
Sbjct: 75 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 134
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELAYTMVM 526
VHRD+++ NIL+ S+ +ADFG A+LL D + + APE +
Sbjct: 135 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 194
Query: 527 TEKYDVYSFGVVTLEVL 543
+ + DV+SFGVV E+
Sbjct: 195 SRQSDVWSFGVVLYELF 211
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSK-LEAFVADFGTARLLHADSSNQTLLAGSY--- 513
L YLH + ++H D+ ++N+LL+S A + DFG A L D ++LL G Y
Sbjct: 178 GLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 234
Query: 514 --GYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++APE+ K D++S + L +L G HP
Sbjct: 235 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
V + G L L + + +E ++ + + + +A+L S +HRD+++ N
Sbjct: 81 VTEYISNGCLLNYLRSHGKGLEP--SQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNC 135
Query: 481 LLNSKLEAFVADFGTARLLHAD---SSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGV 537
L++ L V+DFG R + D SS T + APE+ + + K DV++FG+
Sbjct: 136 LVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWS--APEVFHYFKYSSKSDVWAFGI 193
Query: 538 VTLEVL-MGKHPRDLHS 553
+ EV +GK P DL++
Sbjct: 194 LMWEVFSLGKMPYDLYT 210
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 36/202 (17%)
Query: 377 IGTGAYGSVYKAQ----LPNGRVFALKKL-------NSPETEELAFIRSFRNEAQ----- 420
+G G YG V++ + G++FA+K L N+ +T R+ E +
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 421 --------------VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
+L + G LF L + +E D A + ++ AL +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFME-DTA--CFYLAEISMALGHLHQK- 140
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVM 526
+++RD+ NI+LN + + DFG + D + G+ Y+APE+
Sbjct: 141 --GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGH 198
Query: 527 TEKYDVYSFGVVTLEVLMGKHP 548
D +S G + ++L G P
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPP 220
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 16/166 (9%)
Query: 398 LKKLNSPETEELAFIRSFRNEAQ---VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKA 454
L ++N P +L + +F+ E + +L + G LF L + E D V A
Sbjct: 80 LVEVNHPFIVKLHY--AFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED----VKFYLA 133
Query: 455 -MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY 513
+A AL +LH S +++RD+ NILL+ + + DFG ++ G+
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 190
Query: 514 GYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP---RDLHSTLS 556
Y+APE+ T+ D +SFGV+ E+L G P +D T++
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMT 236
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 46/218 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQME 426
PR + Y IG GAYG V A +V A+KK+ SP + R+ R E ++L +
Sbjct: 23 PRYTNLSY-IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLR-EIKILLRFR 79
Query: 427 RGSLFRILHNDA-EAVELDWAKRVNIVKAMAH--------------------------AL 459
++ I ND A ++ K V IV+ + L
Sbjct: 80 HENIIGI--NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGYI 516
Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 138 KYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 517 APELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 80/197 (40%), Gaps = 33/197 (16%)
Query: 377 IGTGAYGSVYKAQLP-----NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME----- 426
+G G +GSV + G + A+K+L ++ R F+ E Q+L +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ---RDFQREIQILKALHSDFIV 87
Query: 427 ----------RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDC-------SPS 469
R SL ++ D+ +R + L Y C S
Sbjct: 88 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 147
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELAYTMVM 526
VHRD+++ NIL+ S+ +ADFG A+LL D + + APE +
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 207
Query: 527 TEKYDVYSFGVVTLEVL 543
+ + DV+SFGVV E+
Sbjct: 208 SRQSDVWSFGVVLYELF 224
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 40/208 (19%)
Query: 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETE--------ELAFIRSFRNE 418
PR + Y IG GAYG V A +V A+KK++ E + E+ + FR+E
Sbjct: 43 PRYTNLSY-IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 101
Query: 419 ----------AQVLSQMER---------GSLFRILHNDAEAVELDWAKRVNIVKAMAHAL 459
A + QM+ L+++L + L + + L
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLL----KTQHLSNDHICYFLYQILRGL 157
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGYI 516
Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 158 KYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 517 APELAY-TMVMTEKYDVYSFGVVTLEVL 543
APE+ + T+ D++S G + E+L
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEML 242
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 48/219 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425
PR + Y IG GAYG V A L RV A++K+ SP + R+ R E ++L +
Sbjct: 27 PRYTNLSY-IGEGAYGMVCSAYDNLNKVRV-AIRKI-SPFEHQTYCQRTLR-EIKILLRF 82
Query: 426 ERGSLFRILHNDA-EAVELDWAKRVNIVKAMAH--------------------------A 458
++ I ND A ++ K V IV+ +
Sbjct: 83 RHENIIGI--NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGY 515
L Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 141 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 516 IAPELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 31/203 (15%)
Query: 372 DSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSL 430
D K +G GA+ V + G FA K +N+ + F + EA++ +++ ++
Sbjct: 9 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARICRKLQHPNI 67
Query: 431 FRI---------------------LHNDAEAVEL-DWAKRVNIVKAMAHALAYLHHDCSP 468
R+ L D A E A + ++ + ++AY H S
Sbjct: 68 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH---SN 124
Query: 469 SVVHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
+VHR++ N+LL SK + +ADFG A ++ DS AG+ GY++PE+
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
++ D+++ GV+ +L+G P
Sbjct: 184 YSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 31/203 (15%)
Query: 372 DSKYCIGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSL 430
D K +G GA+ V + G FA K +N+ + F + EA++ +++ ++
Sbjct: 8 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARICRKLQHPNI 66
Query: 431 FRI---------------------LHNDAEAVEL-DWAKRVNIVKAMAHALAYLHHDCSP 468
R+ L D A E A + ++ + ++AY H S
Sbjct: 67 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH---SN 123
Query: 469 SVVHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
+VHR++ N+LL SK + +ADFG A ++ DS AG+ GY++PE+
Sbjct: 124 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDP 182
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
++ D+++ GV+ +L+G P
Sbjct: 183 YSKPVDIWACGVILYILLVGYPP 205
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 91/228 (39%), Gaps = 44/228 (19%)
Query: 353 GRVPYSNKHLSSMPTPRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFI 412
G VP + H+ P+ + IG+G +G V+ N A+K + E FI
Sbjct: 13 GLVPRGSLHMVIDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFI 70
Query: 413 RSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA-------------- 458
EA+V+ ++ L ++ V L+ A + + M H
Sbjct: 71 ----EEAEVMMKLSHPKLVQLY-----GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA 121
Query: 459 --------------LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS- 503
+AYL C V+HRD+++ N L+ V+DFG R + D
Sbjct: 122 AETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 178
Query: 504 SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRD 550
++ T + +PE+ + K DV+SFGV+ EV GK P +
Sbjct: 179 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 226
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 33/198 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY + A+K L E + F EA V+ +++ +
Sbjct: 34 ITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 89
Query: 430 LFRIL---------HNDAEAVE----LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L + E + LD+ + N + A L Y+ S ++
Sbjct: 90 LVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK 149
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 150 NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN- 206
Query: 525 VMTEKYDVYSFGVVTLEV 542
+ K DV++FGV+ E+
Sbjct: 207 TFSIKSDVWAFGVLLWEI 224
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 58/99 (58%), Gaps = 10/99 (10%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS-- 512
+A +A+L S + +HRD+++ N+LL + A + DFG AR + DS+ ++ G+
Sbjct: 161 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNAR 215
Query: 513 --YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
++APE + V T + DV+S+G++ E+ +G +P
Sbjct: 216 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 254
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 58/99 (58%), Gaps = 10/99 (10%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS-- 512
+A +A+L S + +HRD+++ N+LL + A + DFG AR + DS+ ++ G+
Sbjct: 167 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNAR 221
Query: 513 --YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
++APE + V T + DV+S+G++ E+ +G +P
Sbjct: 222 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 260
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 36/202 (17%)
Query: 377 IGTGAYGSVYKAQ----LPNGRVFALKKL-------NSPETEELAFIRSFRNEAQ----- 420
+G G YG V++ + G++FA+K L N+ +T R+ E +
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 421 --------------VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDC 466
+L + G LF L + +E D A + ++ AL +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFME-DTA--CFYLAEISMALGHLHQK- 140
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVM 526
+++RD+ NI+LN + + DFG + D + G+ Y+APE+
Sbjct: 141 --GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGH 198
Query: 527 TEKYDVYSFGVVTLEVLMGKHP 548
D +S G + ++L G P
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPP 220
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 58/99 (58%), Gaps = 10/99 (10%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS-- 512
+A +A+L S + +HRD+++ N+LL + A + DFG AR + DS+ ++ G+
Sbjct: 169 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNAR 223
Query: 513 --YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
++APE + V T + DV+S+G++ E+ +G +P
Sbjct: 224 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 262
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 33/198 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ + A+K L E + F EA V+ +++ +
Sbjct: 20 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 75
Query: 430 LFRIL---------HNDAEAVE----LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L + E + LD+ + N + A L Y+ S ++
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESLAYNK 193
Query: 525 VMTEKYDVYSFGVVTLEV 542
+ K DV++FGV+ E+
Sbjct: 194 -FSIKSDVWAFGVLLWEI 210
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 46/218 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETE--------ELAFIRSFRNE 418
PR + Y IG GAYG V A +V A+KK++ E + E+ + +FR+E
Sbjct: 25 PRYTNLSY-IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHE 83
Query: 419 ----------AQVLSQME---------RGSLFRILHNDAEAVELDWAKRVNIVKAMAHAL 459
A + QM+ L+++L + L + + L
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGL 139
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGYI 516
Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 140 KYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 517 APELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 33/198 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ + A+K L E + F EA V+ +++ +
Sbjct: 20 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 75
Query: 430 LFRILHNDAEA------VE-------LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L +E LD+ + N + A L Y+ S ++
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNK 193
Query: 525 VMTEKYDVYSFGVVTLEV 542
+ K DV++FGV+ E+
Sbjct: 194 -FSIKSDVWAFGVLLWEI 210
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 58/99 (58%), Gaps = 10/99 (10%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS-- 512
+A +A+L S + +HRD+++ N+LL + A + DFG AR + DS+ ++ G+
Sbjct: 173 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNAR 227
Query: 513 --YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
++APE + V T + DV+S+G++ E+ +G +P
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 32/206 (15%)
Query: 369 RKIDSKYC--IGTGAYGSVYKAQLPNGRVFALKKL---NSPETEELAFIRSFRN------ 417
R+I C IG G++G V++A+L A+KK+ + EL +R ++
Sbjct: 38 REIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDL 97
Query: 418 EAQVLSQMERGS---LFRILHNDAEAVELDWAKRVNIVKAMA------------HALAYL 462
+A S ++ L +L E V + + M +LAY+
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
H S + HRDI N+LL+ + DFG+A++L A N + + Y Y APEL
Sbjct: 158 H---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-YRAPELI 213
Query: 522 YTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ T D++S G V E++ G+
Sbjct: 214 FGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 32/207 (15%)
Query: 362 LSSMPTPRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAF 411
L SM +K++ IG G YG VYKA+ G V ALKK+ ETE E++
Sbjct: 3 LGSMENFQKVEK---IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL 59
Query: 412 IRSFR--NEAQVLSQMERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAH 457
++ N ++L + + +F LH D + +D + I +K+ +
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQ 118
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIA 517
LA+ H S V+HRD+ N+L+N++ +ADFG AR + Y A
Sbjct: 119 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 175
Query: 518 PE-LAYTMVMTEKYDVYSFGVVTLEVL 543
PE L + D++S G + E++
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 40/222 (18%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ + A+K L E + F EA V+ +++ +
Sbjct: 13 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 68
Query: 430 LFRIL---------HNDAEAVE----LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L + E + LD+ + N + A L Y+ S ++
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTF--TAHAGAKFPIKWTAPESLAYNK 186
Query: 525 VMTEKYDVYSFGVVTLEVLM-------GKHPRDLHSTLSSSY 559
+ K DV++FGV+ E+ G P ++ L Y
Sbjct: 187 -FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY 227
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 58/99 (58%), Gaps = 10/99 (10%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS-- 512
+A +A+L S + +HRD+++ N+LL + A + DFG AR + DS+ ++ G+
Sbjct: 173 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNAR 227
Query: 513 --YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
++APE + V T + DV+S+G++ E+ +G +P
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 54/93 (58%), Gaps = 9/93 (9%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS-- 512
+A +A+L S + +HRD+++ N+LL + A + DFG AR + DS+ ++ G+
Sbjct: 175 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNAR 229
Query: 513 --YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
++APE + V T + DV+S+G++ E+
Sbjct: 230 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 262
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 32/207 (15%)
Query: 362 LSSMPTPRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAF 411
L SM +K++ IG G YG VYKA+ G V ALKK+ ETE E++
Sbjct: 2 LGSMENFQKVEK---IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL 58
Query: 412 IRSFR--NEAQVLSQMERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAH 457
++ N ++L + + +F LH D + +D + I +K+ +
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQ 117
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIA 517
LA+ H S V+HRD+ N+L+N++ +ADFG AR + Y A
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 518 PE-LAYTMVMTEKYDVYSFGVVTLEVL 543
PE L + D++S G + E++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 33/198 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ + A+K L E + F EA V+ +++ +
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 70
Query: 430 LFRIL---------HNDAEAVE----LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L + E + LD+ + N + A L Y+ S ++
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNK 188
Query: 525 VMTEKYDVYSFGVVTLEV 542
+ K DV++FGV+ E+
Sbjct: 189 -FSIKSDVWAFGVLLWEI 205
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLN---SKLEAFVADFGTARLLHADSSNQTLLAG 511
++ AL YLH + ++HRD+ NI+L +L + D G A+ L T G
Sbjct: 131 ISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC-TEFVG 186
Query: 512 SYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
+ Y+APEL T D +SFG + E + G P
Sbjct: 187 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 33/198 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ + A+K L E + F EA V+ +++ +
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 70
Query: 430 LFRIL---------HNDAEAVE----LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L + E + LD+ + N + A L Y+ S ++
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNK 188
Query: 525 VMTEKYDVYSFGVVTLEV 542
+ K DV++FGV+ E+
Sbjct: 189 -FSIKSDVWAFGVLLWEI 205
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 7/126 (5%)
Query: 426 ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLN-- 483
E G L + L+ L ++ ++ AL YLH + ++HRD+ NI+L
Sbjct: 101 EGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPG 157
Query: 484 -SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
+L + D G A+ L T G+ Y+APEL T D +SFG + E
Sbjct: 158 PQRLIHKIIDLGYAKELDQGELC-TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFEC 216
Query: 543 LMGKHP 548
+ G P
Sbjct: 217 ITGFRP 222
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 55/218 (25%)
Query: 376 CIGTGAYGSVYKAQLP-NGRVFALKKLNSPET---------------------------- 406
+G GA+G V KA+ + R +A+KK+ E
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 407 EELAFIR---SFRNEAQVLSQME---RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALA 460
E F++ + + ++ + Q E +L+ ++H++ + D R + + + AL+
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR--LFRQILEALS 130
Query: 461 YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH--------------ADSSNQ 506
Y+H S ++HR++ NI ++ + DFG A+ +H S N
Sbjct: 131 YIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 507 TLLAGSYGYIAPE-LAYTMVMTEKYDVYSFGVVTLEVL 543
T G+ Y+A E L T EK D YS G++ E +
Sbjct: 188 TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 37/202 (18%)
Query: 376 CIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER------- 427
+G G++G V + G+ A+K ++ + ++ S E Q+L Q++
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 428 ------------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
G LF + + E+D A+ I++ + + Y+H +
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHKN---K 146
Query: 470 VVHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVM 526
+VHRD+ N+LL SK + + DFG + A + + +Y YIAPE+ +
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY-YIAPEVLHG-TY 204
Query: 527 TEKYDVYSFGVVTLEVLMGKHP 548
EK DV+S GV+ +L G P
Sbjct: 205 DEKCDVWSTGVILYILLSGCPP 226
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 89/226 (39%), Gaps = 23/226 (10%)
Query: 329 GSIPGEITKLSRLDYLNLSGNKLSGRVPYSNKHLSSMPTPRKIDSKYCI---GTGAYGSV 385
G++ ++T ++ DYL L G G+V + + KI K I A+
Sbjct: 1 GAMDPKVT-MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT 59
Query: 386 YKAQLPNGRVFALKKLNSP--ETEELAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVEL 443
L N R L L + L F+ + N ++ + R +F
Sbjct: 60 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT----------- 108
Query: 444 DWAKRVNIVKA-MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD 502
+R A + AL YLH S VV+RDI N++L+ + DFG + +D
Sbjct: 109 --EERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 163
Query: 503 SSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
+ G+ Y+APE+ D + GVV E++ G+ P
Sbjct: 164 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 46/218 (21%)
Query: 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQME 426
PR + Y IG GAYG V A +V A+KK+ SP + R+ R E ++L +
Sbjct: 23 PRYTNLSY-IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLR-EIKILLRFR 79
Query: 427 RGSLFRILHNDA-EAVELDWAKRVNIVKAMAH--------------------------AL 459
++ I ND A ++ K V IV+ + L
Sbjct: 80 HENIIGI--NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGYI 516
Y+H S +V+HRD+ +N+LLN+ + + DFG AR+ D + L + Y
Sbjct: 138 KYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 517 APELAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
APE+ + T+ D++S G + E+L GKH
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 33/198 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ + A+K L E + F EA V+ +++ +
Sbjct: 20 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 75
Query: 430 LFRIL---------HNDAEAVE----LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L + E + LD+ + N + A L Y+ S ++
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 135
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNK 193
Query: 525 VMTEKYDVYSFGVVTLEV 542
+ K DV++FGV+ E+
Sbjct: 194 -FSIKSDVWAFGVLLWEI 210
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 33/198 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ + A+K L E + F EA V+ +++ +
Sbjct: 20 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 75
Query: 430 LFRIL---------HNDAEAVE----LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L + E + LD+ + N + A L Y+ S ++
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNK 193
Query: 525 VMTEKYDVYSFGVVTLEV 542
+ K DV++FGV+ E+
Sbjct: 194 -FSIKSDVWAFGVLLWEI 210
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 24/195 (12%)
Query: 377 IGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILH 435
IG GA+ V + +L G +A K +N+ + + EA++ ++ ++ R+
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDH-QKLEREARICRLLKHSNIVRLHD 70
Query: 436 NDAEA-------------------VELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
+ +E V ++ + + L + H VVHRD+
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLK 130
Query: 477 SNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
N+LL SK + +ADFG A + D AG+ GY++PE+ + D++
Sbjct: 131 PENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIW 190
Query: 534 SFGVVTLEVLMGKHP 548
+ GV+ +L+G P
Sbjct: 191 ACGVILYILLVGYPP 205
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 37/201 (18%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER-------- 427
+G G++G V + G+ A+K ++ + ++ S E Q+L Q++
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 428 -----------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSV 470
G LF + + E+D A+ I++ + + Y+H + +
Sbjct: 100 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHKN---KI 153
Query: 471 VHRDISSNNILLNSKLE---AFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMT 527
VHRD+ N+LL SK + + DFG + A + + +Y YIAPE+ +
Sbjct: 154 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY-YIAPEVLHG-TYD 211
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
EK DV+S GV+ +L G P
Sbjct: 212 EKCDVWSTGVILYILLSGCPP 232
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 33/198 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ + A+K L E + F EA V+ +++ +
Sbjct: 16 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 71
Query: 430 LFRIL---------HNDAEAVE----LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L + E + LD+ + N + A L Y+ S ++
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 132 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAPAGAKFPIKWTAPESLAYNK 189
Query: 525 VMTEKYDVYSFGVVTLEV 542
+ K DV++FGV+ E+
Sbjct: 190 -FSIKSDVWAFGVLLWEI 206
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLL-----HADS 503
V+ +A + YL S +HRD+++ N+L+ +ADFG AR + + ++
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
Query: 504 SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
+N L ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 217 TNGRL---PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 8/134 (5%)
Query: 220 TSLKILILAQNQLSGL-PQEIGNLKNLMLLDVGNNDIIGPIPSTLGLF---SDLSYLDLS 275
T+ +IL L NQ++ L P +L NL L +G+N + G +P +G+F + L+ LDL
Sbjct: 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALP--VGVFDSLTQLTVLDLG 96
Query: 276 CNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEI 335
NQ RL L L + NKL+ ++P I + LT L L N +K G
Sbjct: 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAF 155
Query: 336 TKLSRLDYLNLSGN 349
+LS L + L GN
Sbjct: 156 DRLSSLTHAYLFGN 169
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 145 GSIPSEISALSKLQLLDLSSNRLR-------GRLTNLNYMSLSRNMLGGLLPQEIGNLKN 197
S+P+ I + Q+L L N++ L NL + L N LG L +L
Sbjct: 32 ASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQ 89
Query: 198 LIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIG 257
L LD+G N L RL LK L + N+L+ LP+ I L +L L + N +
Sbjct: 90 LTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKS 149
Query: 258 PIPSTLGLFSDLSYL 272
IP G F LS L
Sbjct: 150 -IPH--GAFDRLSSL 161
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 33/198 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ + A+K L E + F EA V+ +++ +
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 70
Query: 430 LFRIL---------HNDAEAVE----LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L + E + LD+ + N + A L Y+ S ++
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNK 188
Query: 525 VMTEKYDVYSFGVVTLEV 542
+ K DV++FGV+ E+
Sbjct: 189 -FSIKSDVWAFGVLLWEI 205
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 32/207 (15%)
Query: 362 LSSMPTPRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQ 420
L SM +K++ IG G YG VYKA+ G V ALKK+ +TE + E
Sbjct: 2 LGSMENFQKVEK---IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREIS 57
Query: 421 VLSQMERGSLFRIL---HND------AEAVELDWAKRVN----------IVKA----MAH 457
+L ++ ++ ++L H + E + +D K ++ ++K+ +
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIA 517
LA+ H S V+HRD+ N+L+N++ +ADFG AR + Y A
Sbjct: 118 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 518 PE-LAYTMVMTEKYDVYSFGVVTLEVL 543
PE L + D++S G + E++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
V+ +A + YL S +HRD+++ N+L+ +ADFG AR ++ +
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT 216
Query: 509 LAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 33/198 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ + A+K L E + F EA V+ +++ +
Sbjct: 17 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 72
Query: 430 LFRIL---------HNDAEAVE----LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L + E + LD+ + N + A L Y+ S ++
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAPAGAKFPIKWTAPESLAYNK 190
Query: 525 VMTEKYDVYSFGVVTLEV 542
+ K DV++FGV+ E+
Sbjct: 191 -FSIKSDVWAFGVLLWEI 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 17/143 (11%)
Query: 407 EELAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKA-MAHALAYLHHD 465
+ L F+ + N ++ + R +F +R A + AL YLH
Sbjct: 78 DRLCFVMEYANGGELFFHLSRERVFT-------------EERARFYGAEIVSALEYLH-- 122
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
S VV+RDI N++L+ + DFG + +D + G+ Y+APE+
Sbjct: 123 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
D + GVV E++ G+ P
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
V+ +A + YL S +HRD+++ N+L+ +ADFG AR ++ +
Sbjct: 147 VSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKT 203
Query: 509 LAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 204 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 246
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 33/198 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ + A+K L E + F EA V+ +++ +
Sbjct: 20 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 75
Query: 430 LFRIL---------HNDAEAVE----LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L + E + LD+ + N + A L Y+ S ++
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNK 193
Query: 525 VMTEKYDVYSFGVVTLEV 542
+ K DV++FGV+ E+
Sbjct: 194 -FSIKSDVWAFGVLLWEI 210
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 32/200 (16%)
Query: 377 IGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL 434
+G G +GSV + ++ ++ K+ TE+ A EAQ++ Q++ + R++
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK-ADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 435 H-NDAEAV---------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVVH 472
AEA+ E+ + ++ ++ + YL + VH
Sbjct: 77 GVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVH 133
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL-AGSY--GYIAPELAYTMVMTEK 529
RD+++ N+LL ++ A ++DFG ++ L AD S T AG + + APE + +
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 193
Query: 530 YDVYSFGVVTLEVL-MGKHP 548
DV+S+GV E L G+ P
Sbjct: 194 SDVWSYGVTMWEALSYGQKP 213
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 33/198 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ + A+K L E + F EA V+ +++ +
Sbjct: 28 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 83
Query: 430 LFRIL---------HNDAEAVE----LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L + E + LD+ + N + A L Y+ S ++
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 143
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 144 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNK 201
Query: 525 VMTEKYDVYSFGVVTLEV 542
+ K DV++FGV+ E+
Sbjct: 202 -FSIKSDVWAFGVLLWEI 218
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 33/198 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ + A+K L E + F EA V+ +++ +
Sbjct: 19 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 74
Query: 430 LFRIL---------HNDAEAVE----LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L + E + LD+ + N + A L Y+ S ++
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 134
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 135 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNK 192
Query: 525 VMTEKYDVYSFGVVTLEV 542
+ K DV++FGV+ E+
Sbjct: 193 -FSIKSDVWAFGVLLWEI 209
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 33/198 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ + A+K L E + F EA V+ +++ +
Sbjct: 17 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 72
Query: 430 LFRIL---------HNDAEAVE----LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L + E + LD+ + N + A L Y+ S ++
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNK 190
Query: 525 VMTEKYDVYSFGVVTLEV 542
+ K DV++FGV+ E+
Sbjct: 191 -FSIKSDVWAFGVLLWEI 207
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 33/198 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ + A+K L E + F EA V+ +++ +
Sbjct: 17 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 72
Query: 430 LFRIL---------HNDAEAVE----LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L + E + LD+ + N + A L Y+ S ++
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNK 190
Query: 525 VMTEKYDVYSFGVVTLEV 542
+ K DV++FGV+ E+
Sbjct: 191 -FSIKSDVWAFGVLLWEI 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 33/198 (16%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ + A+K L E + F EA V+ +++ +
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 70
Query: 430 LFRIL---------HNDAEAVE----LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L + E + LD+ + N + A L Y+ S ++
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNK 188
Query: 525 VMTEKYDVYSFGVVTLEV 542
+ K DV++FGV+ E+
Sbjct: 189 -FSIKSDVWAFGVLLWEI 205
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
V+ +A + YL S +HRD+++ N+L+ +ADFG AR ++ +
Sbjct: 149 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 205
Query: 509 LAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 206 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 248
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 77/202 (38%), Gaps = 43/202 (21%)
Query: 377 IGTGAYGSVYKA-----QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER---- 427
+G G +GSV Q G V A+KKL E L R F E ++L ++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 77
Query: 428 -----------------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
GSL L AE + D K + + + YL
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERI--DHIKLLQYTSQICKGMEYL-- 133
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELA 521
+ +HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 522 YTMVMTEKYDVYSFGVVTLEVL 543
+ DV+SFGVV E+
Sbjct: 193 TESKFSVASDVWSFGVVLYELF 214
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 17/143 (11%)
Query: 407 EELAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKA-MAHALAYLHHD 465
+ L F+ + N ++ + R +F +R A + AL YLH
Sbjct: 78 DRLCFVMEYANGGELFFHLSRERVFT-------------EERARFYGAEIVSALEYLH-- 122
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
S VV+RDI N++L+ + DFG + +D + G+ Y+APE+
Sbjct: 123 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
D + GVV E++ G+ P
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
V+ +A + YL S +HRD+++ N+L+ +ADFG AR ++ +
Sbjct: 206 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 262
Query: 509 LAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 263 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
V+ +A + YL S +HRD+++ N+L+ +ADFG AR ++ +
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 509 LAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
V+ +A + YL S +HRD+++ N+L+ +ADFG AR ++ +
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 509 LAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
V+ +A + YL S +HRD+++ N+L+ +ADFG AR ++ +
Sbjct: 152 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 208
Query: 509 LAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 209 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 251
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
V+ +A + YL S +HRD+++ N+L+ +ADFG AR ++ +
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 509 LAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 37/202 (18%)
Query: 376 CIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER------- 427
+G G++G V + G+ A+K ++ + ++ S E Q+L Q++
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 428 ------------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
G LF + + E+D A+ I++ + + Y+H +
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHKN---K 170
Query: 470 VVHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVM 526
+VHRD+ N+LL SK + + DFG + A + + +Y YIAPE+ +
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY-YIAPEVLHG-TY 228
Query: 527 TEKYDVYSFGVVTLEVLMGKHP 548
EK DV+S GV+ +L G P
Sbjct: 229 DEKCDVWSTGVILYILLSGCPP 250
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 37/202 (18%)
Query: 376 CIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER------- 427
+G G++G V + G+ A+K ++ + ++ S E Q+L Q++
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 428 ------------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
G LF + + E+D A+ I++ + + Y+H +
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHKN---K 169
Query: 470 VVHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVM 526
+VHRD+ N+LL SK + + DFG + A + + +Y YIAPE+ +
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY-YIAPEVLHG-TY 227
Query: 527 TEKYDVYSFGVVTLEVLMGKHP 548
EK DV+S GV+ +L G P
Sbjct: 228 DEKCDVWSTGVILYILLSGCPP 249
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 17/143 (11%)
Query: 407 EELAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKA-MAHALAYLHHD 465
+ L F+ + N ++ + R +F +R A + AL YLH
Sbjct: 78 DRLCFVMEYANGGELFFHLSRERVFT-------------EERARFYGAEIVSALEYLH-- 122
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
S VV+RDI N++L+ + DFG + +D + G+ Y+APE+
Sbjct: 123 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
D + GVV E++ G+ P
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
V+ +A + YL S +HRD+++ N+L+ +ADFG AR ++ +
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 509 LAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + L++ H S V+H
Sbjct: 71 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLSFCH---SHRVLH 126
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR T + Y APE L + D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 187 IWSLGCIFAEMV 198
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 17/143 (11%)
Query: 407 EELAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKA-MAHALAYLHHD 465
+ L F+ + N ++ + R +F +R A + AL YLH
Sbjct: 78 DRLCFVMEYANGGELFFHLSRERVFT-------------EERARFYGAEIVSALEYLH-- 122
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
S VV+RDI N++L+ + DFG + +D + G+ Y+APE+
Sbjct: 123 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
D + GVV E++ G+ P
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 76/202 (37%), Gaps = 43/202 (21%)
Query: 377 IGTGAYGSVYKA-----QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER---- 427
+G G +GSV Q G V A+KKL E L R F E ++L ++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 77
Query: 428 -----------------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
GSL L E + D K + + + YL
Sbjct: 78 KYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 133
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELA 521
+ +HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 522 YTMVMTEKYDVYSFGVVTLEVL 543
+ DV+SFGVV E+
Sbjct: 193 TESKFSVASDVWSFGVVLYELF 214
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 43/207 (20%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKL--------NSPET-EELAFIRSFRNE-------- 418
IG GAYG V A+ G+ A+KK+ N+ T EL ++ F+++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 419 -------------AQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHD 465
VL ME L +I+H+ ++ + L+ + + + L Y+H
Sbjct: 123 LRPTVPYGEFKSVYVVLDLME-SDLHQIIHS-SQPLTLEHVR--YFLYQLLRGLKYMH-- 176
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY----GYIAPELA 521
S V+HRD+ +N+L+N E + DFG AR L + Y Y APEL
Sbjct: 177 -SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 235
Query: 522 YTM-VMTEKYDVYSFGVVTLEVLMGKH 547
++ T+ D++S G + E+L +
Sbjct: 236 LSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 412 IRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+RS + VL M+ G L + N+ + + +A + +L S V
Sbjct: 160 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKFL---ASKKFV 214
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADS----SNQTLLAGSYGYIAPELAYTMVMT 527
HRD+++ N +L+ K VADFG AR ++ N+T ++A E T T
Sbjct: 215 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT 274
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
K DV+SFGV+ E++ P
Sbjct: 275 TKSDVWSFGVLLWELMTRGAP 295
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 412 IRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+RS + VL M+ G L + N+ + + +A + +L S V
Sbjct: 102 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASKKFV 156
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADS----SNQTLLAGSYGYIAPELAYTMVMT 527
HRD+++ N +L+ K VADFG AR ++ N+T ++A E T T
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT 216
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
K DV+SFGV+ E++ P
Sbjct: 217 TKSDVWSFGVLLWELMTRGAP 237
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
V+ +A + YL S +HRD+++ N+L+ +ADFG AR ++ +
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 509 LAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
G ++APE + V T + DV+SFGV+ E+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 40/222 (18%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G +G VY+ A+K L E + F EA V+ +++ +
Sbjct: 13 ITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPN 68
Query: 430 LFRIL---------HNDAEAVE----LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L + E + LD+ + N + A L Y+ S ++
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPE-LAYTM 524
+HRD+++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESLAYNK 186
Query: 525 VMTEKYDVYSFGVVTLEVLM-------GKHPRDLHSTLSSSY 559
+ K DV++FGV+ E+ G P ++ L Y
Sbjct: 187 -FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY 227
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
IG G YG VYKA+ G V ALKK+ +TE + E +L ++ ++ ++L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 435 --HND------AEAVELDWAKRVN----------IVKA----MAHALAYLHHDCSPSVVH 472
H + E V+ D K ++ ++K+ + LA+ H S V+H
Sbjct: 73 VIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 129
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR + Y APE L + D
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 190 IWSLGCIFAEMV 201
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 412 IRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+RS + VL M+ G L + N+ + + +A + +L S V
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASKKFV 155
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADS----SNQTLLAGSYGYIAPELAYTMVMT 527
HRD+++ N +L+ K VADFG AR ++ N+T ++A E T T
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT 215
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
K DV+SFGV+ E++ P
Sbjct: 216 TKSDVWSFGVLLWELMTRGAP 236
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 412 IRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+RS + VL M+ G L + N+ + + +A + +L S V
Sbjct: 106 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASKKFV 160
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADS----SNQTLLAGSYGYIAPELAYTMVMT 527
HRD+++ N +L+ K VADFG AR ++ N+T ++A E T T
Sbjct: 161 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT 220
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
K DV+SFGV+ E++ P
Sbjct: 221 TKSDVWSFGVLLWELMTRGAP 241
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NQTLLAGSYGYIAPELAYTM 524
S +HRD+++ NILL+ K + DFG AR ++ D + ++APE +
Sbjct: 166 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDR 225
Query: 525 VMTEKYDVYSFGVVTLEVL-MGKHP 548
V T + DV+SFGV+ E+ +G P
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 42/204 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHN 436
IG+G +G V+ N A+K + E FI EA+V+ ++ L ++
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFI----EEAEVMMKLSHPKLVQLY-- 69
Query: 437 DAEAVELDWAKRVNIVKAMAHA----------------------------LAYLHHDCSP 468
V L+ A + + M H +AYL C
Sbjct: 70 ---GVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC-- 124
Query: 469 SVVHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNQTLLAGSYGYIAPELAYTMVMT 527
V+HRD+++ N L+ V+DFG R + D ++ T + +PE+ +
Sbjct: 125 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 183
Query: 528 EKYDVYSFGVVTLEVL-MGKHPRD 550
K DV+SFGV+ EV GK P +
Sbjct: 184 SKSDVWSFGVLMWEVFSEGKIPYE 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 17/143 (11%)
Query: 407 EELAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKA-MAHALAYLHHD 465
+ L F+ + N ++ + R +F +R A + AL YLH
Sbjct: 78 DRLCFVMEYANGGELFFHLSRERVFT-------------EERARFYGAEIVSALEYLH-- 122
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
S VV+RDI N++L+ + DFG + +D + G+ Y+APE+
Sbjct: 123 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
D + GVV E++ G+ P
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NQTLLAGSYGYIAPELAYTM 524
S +HRD+++ NILL+ K + DFG AR ++ D + ++APE +
Sbjct: 216 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 275
Query: 525 VMTEKYDVYSFGVVTLEVL-MGKHP 548
V T + DV+SFGV+ E+ +G P
Sbjct: 276 VYTIQSDVWSFGVLLWEIFSLGASP 300
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NQTLLAGSYGYIAPELAYTM 524
S +HRD+++ NILL+ K + DFG AR ++ D + ++APE +
Sbjct: 166 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 225
Query: 525 VMTEKYDVYSFGVVTLEVL-MGKHP 548
V T + DV+SFGV+ E+ +G P
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 412 IRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+RS + VL M+ G L + N+ + + +A + +L S V
Sbjct: 99 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASKKFV 153
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADS----SNQTLLAGSYGYIAPELAYTMVMT 527
HRD+++ N +L+ K VADFG AR ++ N+T ++A E T T
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT 213
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
K DV+SFGV+ E++ P
Sbjct: 214 TKSDVWSFGVLLWELMTRGAP 234
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NQTLLAGSYGYIAPELAYTM 524
S +HRD+++ NILL+ K + DFG AR ++ D + ++APE +
Sbjct: 157 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 216
Query: 525 VMTEKYDVYSFGVVTLEVL-MGKHP 548
V T + DV+SFGV+ E+ +G P
Sbjct: 217 VYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NQTLLAGSYGYIAPELAYTM 524
S +HRD+++ NILL+ K + DFG AR ++ D + ++APE +
Sbjct: 168 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 227
Query: 525 VMTEKYDVYSFGVVTLEVL-MGKHP 548
V T + DV+SFGV+ E+ +G P
Sbjct: 228 VYTIQSDVWSFGVLLWEIFSLGASP 252
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NQTLLAGSYGYIAPELAYTM 524
S +HRD+++ NILL+ K + DFG AR ++ D + ++APE +
Sbjct: 211 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 270
Query: 525 VMTEKYDVYSFGVVTLEVL-MGKHP 548
V T + DV+SFGV+ E+ +G P
Sbjct: 271 VYTIQSDVWSFGVLLWEIFSLGASP 295
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 412 IRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+RS + VL M+ G L + N+ + + +A + +L S V
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASKKFV 155
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADS----SNQTLLAGSYGYIAPELAYTMVMT 527
HRD+++ N +L+ K VADFG AR ++ N+T ++A E T T
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT 215
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
K DV+SFGV+ E++ P
Sbjct: 216 TKSDVWSFGVLLWELMTRGAP 236
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NQTLLAGSYGYIAPELAYTM 524
S +HRD+++ NILL+ K + DFG AR ++ D + ++APE +
Sbjct: 203 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 262
Query: 525 VMTEKYDVYSFGVVTLEVL-MGKHP 548
V T + DV+SFGV+ E+ +G P
Sbjct: 263 VYTIQSDVWSFGVLLWEIFSLGASP 287
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NQTLLAGSYGYIAPELAYTM 524
S +HRD+++ NILL+ K + DFG AR ++ D + ++APE +
Sbjct: 209 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 268
Query: 525 VMTEKYDVYSFGVVTLEVL-MGKHP 548
V T + DV+SFGV+ E+ +G P
Sbjct: 269 VYTIQSDVWSFGVLLWEIFSLGASP 293
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 86/195 (44%), Gaps = 24/195 (12%)
Query: 377 IGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILH 435
+G GA+ V + ++P G+ +A K +N+ + + EA++ ++ ++ R+
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDH-QKLEREARICRLLKHPNIVRLHD 70
Query: 436 NDAEA-------------------VELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
+ +E V ++ + + L ++H +VHRD+
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLK 130
Query: 477 SNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
N+LL SK + +ADFG A + D AG+ GY++PE+ + D++
Sbjct: 131 PENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMW 190
Query: 534 SFGVVTLEVLMGKHP 548
+ GV+ +L+G P
Sbjct: 191 ACGVILYILLVGYPP 205
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NQTLLAGSYGYIAPELAYTM 524
S +HRD+++ NILL+ K + DFG AR ++ D + ++APE +
Sbjct: 157 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 216
Query: 525 VMTEKYDVYSFGVVTLEVL-MGKHP 548
V T + DV+SFGV+ E+ +G P
Sbjct: 217 VYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 40/215 (18%)
Query: 368 PRKIDSKYCIGTGAYGSVYKA--QLPNGRVFALKKLNSPETE--------ELAFIRSFRN 417
PR +Y IG GAYG V A + RV A+KK++ E + E+ + FR+
Sbjct: 43 PRYTQLQY-IGEGAYGMVSSAYDHVRKTRV-AIKKISPFEHQTYCQRTLREIQILLRFRH 100
Query: 418 EAQV-LSQMERGSLF---RILHNDAEAVELDWAKRVN-----------IVKAMAHALAYL 462
E + + + R S R ++ + +E D K + + + L Y+
Sbjct: 101 ENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYI 160
Query: 463 HHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL---AGSYGYIAPE 519
H S +V+HRD+ +N+L+N+ + + DFG AR+ + + L + Y APE
Sbjct: 161 H---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
Query: 520 LAY-TMVMTEKYDVYSFGVVTLEVLM------GKH 547
+ + T+ D++S G + E+L GKH
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 76/202 (37%), Gaps = 43/202 (21%)
Query: 377 IGTGAYGSVYKA-----QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER---- 427
+G G +GSV Q G V A+KKL E L R F E ++L ++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 72
Query: 428 -----------------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
GSL L E + D K + + + YL
Sbjct: 73 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 128
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELA 521
+ +HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 129 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 522 YTMVMTEKYDVYSFGVVTLEVL 543
+ DV+SFGVV E+
Sbjct: 188 TESKFSVASDVWSFGVVLYELF 209
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 17/143 (11%)
Query: 407 EELAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKA-MAHALAYLHHD 465
+ L F+ + N ++ + R +F +R A + AL YLH
Sbjct: 81 DRLCFVMEYANGGELFFHLSRERVFT-------------EERARFYGAEIVSALEYLH-- 125
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
S VV+RDI N++L+ + DFG + +D + G+ Y+APE+
Sbjct: 126 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 184
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
D + GVV E++ G+ P
Sbjct: 185 YGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 86/195 (44%), Gaps = 24/195 (12%)
Query: 377 IGTGAYGSVYKA-QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILH 435
+G GA+ V + ++P G+ +A K +N+ + + EA++ ++ ++ R+
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDH-QKLEREARICRLLKHPNIVRLHD 70
Query: 436 NDAEA-------------------VELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDIS 476
+ +E V ++ + + L ++H +VHRD+
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLK 130
Query: 477 SNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVY 533
N+LL SK + +ADFG A + D AG+ GY++PE+ + D++
Sbjct: 131 PENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMW 190
Query: 534 SFGVVTLEVLMGKHP 548
+ GV+ +L+G P
Sbjct: 191 ACGVILYILLVGYPP 205
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NQTLLAGSYGYIAPELAYTM 524
S +HRD+++ NILL+ K + DFG AR ++ D + ++APE +
Sbjct: 218 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 277
Query: 525 VMTEKYDVYSFGVVTLEVL-MGKHP 548
V T + DV+SFGV+ E+ +G P
Sbjct: 278 VYTIQSDVWSFGVLLWEIFSLGASP 302
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 76/202 (37%), Gaps = 43/202 (21%)
Query: 377 IGTGAYGSVYKA-----QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER---- 427
+G G +GSV Q G V A+KKL E L R F E ++L ++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 77
Query: 428 -----------------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
GSL L E + D K + + + YL
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 133
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELA 521
+ +HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 522 YTMVMTEKYDVYSFGVVTLEVL 543
+ DV+SFGVV E+
Sbjct: 193 TESKFSVASDVWSFGVVLYELF 214
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 74 IHTENKLYLVFEFLHQDLKTF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 129
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR + Y APE L + D
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 190 IWSLGCIFAEMV 201
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 42/204 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHN 436
IG+G +G V+ N A+K + E FI EA+V+ ++ L ++
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFI----EEAEVMMKLSHPKLVQLY-- 71
Query: 437 DAEAVELDWAKRVNIVKAMAHA----------------------------LAYLHHDCSP 468
V L+ A + + M H +AYL C
Sbjct: 72 ---GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC-- 126
Query: 469 SVVHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNQTLLAGSYGYIAPELAYTMVMT 527
V+HRD+++ N L+ V+DFG R + D ++ T + +PE+ +
Sbjct: 127 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 185
Query: 528 EKYDVYSFGVVTLEVL-MGKHPRD 550
K DV+SFGV+ EV GK P +
Sbjct: 186 SKSDVWSFGVLMWEVFSEGKIPYE 209
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 76/202 (37%), Gaps = 43/202 (21%)
Query: 377 IGTGAYGSVYKA-----QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER---- 427
+G G +GSV Q G V A+KKL E L R F E ++L ++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 74
Query: 428 -----------------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
GSL L E + D K + + + YL
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 130
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELA 521
+ +HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 522 YTMVMTEKYDVYSFGVVTLEVL 543
+ DV+SFGVV E+
Sbjct: 190 TESKFSVASDVWSFGVVLYELF 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 76/202 (37%), Gaps = 43/202 (21%)
Query: 377 IGTGAYGSVYKA-----QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER---- 427
+G G +GSV Q G V A+KKL E L R F E ++L ++
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 79
Query: 428 -----------------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
GSL L E + D K + + + YL
Sbjct: 80 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 135
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELA 521
+ +HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 136 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 522 YTMVMTEKYDVYSFGVVTLEVL 543
+ DV+SFGVV E+
Sbjct: 195 TESKFSVASDVWSFGVVLYELF 216
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 42/204 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHN 436
IG+G +G V+ N A+K + E FI EA+V+ ++ L ++
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFI----EEAEVMMKLSHPKLVQLY-- 68
Query: 437 DAEAVELDWAKRVNIVKAMAHA----------------------------LAYLHHDCSP 468
V L+ A + + M H +AYL C
Sbjct: 69 ---GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC-- 123
Query: 469 SVVHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNQTLLAGSYGYIAPELAYTMVMT 527
V+HRD+++ N L+ V+DFG R + D ++ T + +PE+ +
Sbjct: 124 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 528 EKYDVYSFGVVTLEVL-MGKHPRD 550
K DV+SFGV+ EV GK P +
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYE 206
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 76/202 (37%), Gaps = 43/202 (21%)
Query: 377 IGTGAYGSVYKA-----QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER---- 427
+G G +GSV Q G V A+KKL E L R F E ++L ++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 92
Query: 428 -----------------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
GSL L E + D K + + + YL
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 148
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELA 521
+ +HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 522 YTMVMTEKYDVYSFGVVTLEVL 543
+ DV+SFGVV E+
Sbjct: 208 TESKFSVASDVWSFGVVLYELF 229
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 42/204 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHN 436
IG+G +G V+ N A+K + E FI EA+V+ ++ L ++
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFI----EEAEVMMKLSHPKLVQLY-- 66
Query: 437 DAEAVELDWAKRVNIVKAMAHA----------------------------LAYLHHDCSP 468
V L+ A + + M H +AYL C
Sbjct: 67 ---GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC-- 121
Query: 469 SVVHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNQTLLAGSYGYIAPELAYTMVMT 527
V+HRD+++ N L+ V+DFG R + D ++ T + +PE+ +
Sbjct: 122 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 180
Query: 528 EKYDVYSFGVVTLEVL-MGKHPRD 550
K DV+SFGV+ EV GK P +
Sbjct: 181 SKSDVWSFGVLMWEVFSEGKIPYE 204
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 76/202 (37%), Gaps = 43/202 (21%)
Query: 377 IGTGAYGSVYKA-----QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER---- 427
+G G +GSV Q G V A+KKL E L R F E ++L ++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 73
Query: 428 -----------------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
GSL L E + D K + + + YL
Sbjct: 74 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 129
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELA 521
+ +HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 130 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 522 YTMVMTEKYDVYSFGVVTLEVL 543
+ DV+SFGVV E+
Sbjct: 189 TESKFSVASDVWSFGVVLYELF 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 76/202 (37%), Gaps = 43/202 (21%)
Query: 377 IGTGAYGSVYKA-----QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER---- 427
+G G +GSV Q G V A+KKL E L R F E ++L ++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 74
Query: 428 -----------------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
GSL L E + D K + + + YL
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 130
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELA 521
+ +HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 522 YTMVMTEKYDVYSFGVVTLEVL 543
+ DV+SFGVV E+
Sbjct: 190 TESKFSVASDVWSFGVVLYELF 211
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 28/196 (14%)
Query: 377 IGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFR--- 432
IG G YG+V+KA+ + ALK++ + +E + R E +L +++ ++ R
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELKHKNIVRLHD 68
Query: 433 ILHNDA------EAVELDWAKRVN---------IVKA----MAHALAYLHHDCSPSVVHR 473
+LH+D E + D K + IVK+ + L + H S +V+HR
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHR 125
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAY-TMVMTEKYDV 532
D+ N+L+N E +ADFG AR + + Y P++ + + + D+
Sbjct: 126 DLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185
Query: 533 YSFGVVTLEVLMGKHP 548
+S G + E+ P
Sbjct: 186 WSAGCIFAELANAARP 201
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 39/201 (19%)
Query: 377 IGTGAYGSVYK-AQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER-------- 427
+G+GA+G V++ + GRVF K +N+P + ++ NE +++Q+
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVK---NEISIMNQLHHPKLINLHD 115
Query: 428 -----------------GSLF-RILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
G LF RI AE ++ A+ +N ++ L ++H S
Sbjct: 116 AFEDKYEMVLILEFLSGGELFDRIA---AEDYKMSEAEVINYMRQACEGLKHMHEH---S 169
Query: 470 VVHRDISSNNILLNSKLEAFVA--DFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMT 527
+VH DI NI+ +K + V DFG A L+ D + A + + APE+ +
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATA-EFAAPEIVDREPVG 228
Query: 528 EKYDVYSFGVVTLEVLMGKHP 548
D+++ GV+ +L G P
Sbjct: 229 FYTDMWAIGVLGYVLLSGLSP 249
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 43/207 (20%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKL--------NSPET-EELAFIRSFRNE-------- 418
IG GAYG V A+ G+ A+KK+ N+ T EL ++ F+++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 419 -------------AQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHD 465
VL ME L +I+H+ ++ + L+ + + + L Y+H
Sbjct: 122 LRPTVPYGEFKSVYVVLDLME-SDLHQIIHS-SQPLTLEHVR--YFLYQLLRGLKYMH-- 175
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY----GYIAPELA 521
S V+HRD+ +N+L+N E + DFG AR L + Y Y APEL
Sbjct: 176 -SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 234
Query: 522 YTM-VMTEKYDVYSFGVVTLEVLMGKH 547
++ T+ D++S G + E+L +
Sbjct: 235 LSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 37/202 (18%)
Query: 376 CIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER------- 427
+G G++G V + G+ A+K ++ + ++ S E Q+L Q++
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 428 ------------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
G LF + + E+D A+ I++ + + Y H +
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYXHKN---K 146
Query: 470 VVHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVM 526
+VHRD+ N+LL SK + + DFG + A + + +Y YIAPE+ +
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAY-YIAPEVLHG-TY 204
Query: 527 TEKYDVYSFGVVTLEVLMGKHP 548
EK DV+S GV+ +L G P
Sbjct: 205 DEKCDVWSTGVILYILLSGCPP 226
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 76/202 (37%), Gaps = 43/202 (21%)
Query: 377 IGTGAYGSVYKA-----QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER---- 427
+G G +GSV Q G V A+KKL E L R F E ++L ++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 92
Query: 428 -----------------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
GSL L E + D K + + + YL
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 148
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELA 521
+ +HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 522 YTMVMTEKYDVYSFGVVTLEVL 543
+ DV+SFGVV E+
Sbjct: 208 TESKFSVASDVWSFGVVLYELF 229
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NQTLLAGSYGYIAPELAYTM 524
S +HRD+++ NILL+ K + DFG AR ++ D + ++APE +
Sbjct: 162 SRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 221
Query: 525 VMTEKYDVYSFGVVTLEVL-MGKHP 548
V T + DV+SFGV+ E+ +G P
Sbjct: 222 VYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 76/202 (37%), Gaps = 43/202 (21%)
Query: 377 IGTGAYGSVYKA-----QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER---- 427
+G G +GSV Q G V A+KKL E L R F E ++L ++
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 80
Query: 428 -----------------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
GSL L E + D K + + + YL
Sbjct: 81 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 136
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELA 521
+ +HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 137 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 522 YTMVMTEKYDVYSFGVVTLEVL 543
+ DV+SFGVV E+
Sbjct: 196 TESKFSVASDVWSFGVVLYELF 217
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 425 MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS 484
M +GSL L +D E + K ++ +A +A++ + +HRD+ + NIL+++
Sbjct: 258 MAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSA 313
Query: 485 KLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
L +ADFG AR+ T APE T K DV+SFG++ +E++
Sbjct: 314 SLVCKIADFGLARVGAKFPIKWT---------APEAINFGSFTIKSDVWSFGILLMEIV 363
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 73 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 128
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR + Y APE L + D
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 188
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 189 IWSLGCIFAEMV 200
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 73 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 128
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR + Y APE L + D
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 188
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 189 IWSLGCIFAEMV 200
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 76/202 (37%), Gaps = 43/202 (21%)
Query: 377 IGTGAYGSVYKA-----QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER---- 427
+G G +GSV Q G V A+KKL E L R F E ++L ++
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 78
Query: 428 -----------------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
GSL L E + D K + + + YL
Sbjct: 79 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 134
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELA 521
+ +HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 135 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 522 YTMVMTEKYDVYSFGVVTLEVL 543
+ DV+SFGVV E+
Sbjct: 194 TESKFSVASDVWSFGVVLYELF 215
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 32/205 (15%)
Query: 364 SMPTPRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIR 413
SM +K++ IG G YG VYKA+ G V ALKK+ ETE E++ ++
Sbjct: 1 SMENFQKVEK---IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 414 SFR--NEAQVLSQMERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHAL 459
N ++L + + +F LH D + +D + I +K+ + L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGL 116
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
A+ H S V+HRD+ N+L+N++ +ADFG AR + Y APE
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 520 -LAYTMVMTEKYDVYSFGVVTLEVL 543
L + D++S G + E++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 74 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 129
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR + Y APE L + D
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 190 IWSLGCIFAEMV 201
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 76/202 (37%), Gaps = 43/202 (21%)
Query: 377 IGTGAYGSVYKA-----QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER---- 427
+G G +GSV Q G V A+KKL E L R F E ++L ++
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 81
Query: 428 -----------------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
GSL L E + D K + + + YL
Sbjct: 82 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 137
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELA 521
+ +HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 138 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 522 YTMVMTEKYDVYSFGVVTLEVL 543
+ DV+SFGVV E+
Sbjct: 197 TESKFSVASDVWSFGVVLYELF 218
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 72 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 127
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR + Y APE L + D
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 188 IWSLGCIFAEMV 199
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 76/202 (37%), Gaps = 43/202 (21%)
Query: 377 IGTGAYGSVYKA-----QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER---- 427
+G G +GSV Q G V A+KKL E L R F E ++L ++
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 105
Query: 428 -----------------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
GSL L E + D K + + + YL
Sbjct: 106 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 161
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELA 521
+ +HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 162 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 522 YTMVMTEKYDVYSFGVVTLEVL 543
+ DV+SFGVV E+
Sbjct: 221 TESKFSVASDVWSFGVVLYELF 242
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 70 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 125
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR + Y APE L + D
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 186 IWSLGCIFAEMV 197
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 71 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR + Y APE L + D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 187 IWSLGCIFAEMV 198
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 71 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR + Y APE L + D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 187 IWSLGCIFAEMV 198
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 71 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR + Y APE L + D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 187 IWSLGCIFAEMV 198
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V AL K+ ETE E++ ++ N ++L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 71 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR T + Y APE L + D
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 187 IWSLGCIFAEMV 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V AL K+ ETE E++ ++ N ++L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 70 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 125
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR T + Y APE L + D
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 186 IWSLGCIFAEMV 197
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 73 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 128
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR + Y APE L + D
Sbjct: 129 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 188
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 189 IWSLGCIFAEMV 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 72 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 127
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR + Y APE L + D
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 188 IWSLGCIFAEMV 199
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 72 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 127
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR + Y APE L + D
Sbjct: 128 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 188 IWSLGCIFAEMV 199
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 70 IHTENKLYLVFEFLHQDLKKF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 125
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR + Y APE L + D
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 186 IWSLGCIFAEMV 197
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 91/221 (41%), Gaps = 37/221 (16%)
Query: 360 KHLSSMPTPRKIDSKYCIGTGAYGSVYKAQL--PNGRVF--ALKKLN--------SPETE 407
+H+ P+ + IG G +G VY L +G+ A+K LN S
Sbjct: 22 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 81
Query: 408 ELAFIRSF-------------RNEAQ---VLSQMERGSLFRILHNDAEAVELDWAKRVNI 451
E ++ F R+E VL M+ G L + N+ + +
Sbjct: 82 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGF 139
Query: 452 VKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLL---HADS-SNQT 507
+A + +L S VHRD+++ N +L+ K VADFG AR + DS N+T
Sbjct: 140 GLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKT 196
Query: 508 LLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++A E T T K DV+SFGV+ E++ P
Sbjct: 197 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 24/155 (15%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
++I +A A+ +LH S ++HRD+ +NI V DFG + D QT+
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 509 L------------AGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLS 556
L G+ Y++PE + + K D++S G++ E+L + S
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLY---------SFS 274
Query: 557 SSYDPKIMLIDVLDQRLPPPVDRKVIQDILLVSTI 591
+ + ++ DV + + P +K Q+ ++V +
Sbjct: 275 TQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDM 309
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
IG G YG VYKA+ G V ALKK+ +TE + E +L ++ ++ ++L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 435 --HND------AEAVELDWAKRVN----------IVKA----MAHALAYLHHDCSPSVVH 472
H + E + +D K ++ ++K+ + LA+ H S V+H
Sbjct: 71 VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 127
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR + Y APE L + D
Sbjct: 128 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 188 IWSLGCIFAEMV 199
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL- 434
IG G YG VYKA+ G V ALKK+ +TE + E +L ++ ++ ++L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 435 --HND------AEAVELDWAKRVN----------IVKA----MAHALAYLHHDCSPSVVH 472
H + E V D ++ ++K+ + LA+ H S V+H
Sbjct: 69 VIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 125
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR T + Y APE L + D
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 186 IWSLGCIFAEMV 197
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NQTLLAGSYGYIAPELAYT 523
S +HRD+++ NILL+ K + DFG AR ++ D + ++APE +
Sbjct: 161 ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 220
Query: 524 MVMTEKYDVYSFGVVTLEVL-MGKHP 548
V T + DV+SFGV+ E+ +G P
Sbjct: 221 RVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 10/101 (9%)
Query: 454 AMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFG-TARLLHADSSNQTLLAGS 512
A+ AL YL V+HRD+ +NILL+ + + + DFG + RL+ + +++ AG
Sbjct: 132 AIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS--AGC 187
Query: 513 YGYIAPELAYTMVMTE-----KYDVYSFGVVTLEVLMGKHP 548
Y+APE T+ + DV+S G+ +E+ G+ P
Sbjct: 188 AAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 398 LKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAH 457
LK L P +L + + + ++ + G LF + E D +R + +
Sbjct: 63 LKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTE-DEGRR--FFQQIIC 119
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIA 517
A+ Y H +VHRD+ N+LL+ L +ADFG + ++ D + GS Y A
Sbjct: 120 AIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAA 175
Query: 518 PELAY-TMVMTEKYDVYSFGVVTLEVLMGKHPRD 550
PE+ + + DV+S G+V +L+G+ P D
Sbjct: 176 PEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 33/197 (16%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR--------NEAQVLSQM 425
IG+GA G V Y A L R A+KKL+ P + R++R N ++S +
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 426 ERGSLFRILHN-----------DAE-----AVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
+ + L DA +ELD + ++ M + +LH S
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 184
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
++HRD+ +NI++ S + DFG AR + Y Y APE+ M E
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKEN 243
Query: 530 YDVYSFGVVTLEVLMGK 546
D++S G + E++ K
Sbjct: 244 VDIWSVGCIMGEMVRHK 260
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 108/263 (41%), Gaps = 57/263 (21%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ A+K L E+ + F EA V+ +++ +
Sbjct: 222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHPN 277
Query: 430 LFRILHNDAEAVE-------------LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L LD+ + N + A L Y+ S ++
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 337
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY---GYIAPE-LAYTM 524
+HR++++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 338 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNK 395
Query: 525 VMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVL-----DQRL--PPPV 577
+ K DV++FGV+ E+ +T S P I L V D R+ P
Sbjct: 396 -FSIKSDVWAFGVLLWEI----------ATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 444
Query: 578 DRKVIQDILLVSTISFACLQSNP 600
KV + + AC Q NP
Sbjct: 445 PEKVYE-------LMRACWQWNP 460
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 40/204 (19%)
Query: 376 CIGTGAYGSVY---KAQLPN-GRVFALKKL-----------------------NSPETEE 408
+G G++G V+ K P+ G ++A+K L N P +
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVK 94
Query: 409 LAFIRSFRNEAQ---VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKA-MAHALAYLHH 464
L + +F+ E + +L + G LF L + E D V A +A L +LH
Sbjct: 95 LHY--AFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED----VKFYLAELALGLDHLH- 147
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTM 524
S +++RD+ NILL+ + + DFG ++ G+ Y+APE+
Sbjct: 148 --SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQ 205
Query: 525 VMTEKYDVYSFGVVTLEVLMGKHP 548
+ D +S+GV+ E+L G P
Sbjct: 206 GHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS----YGYIAPELAY 522
S +HRD+++ NILL+ K + DFG AR + D + G ++APE +
Sbjct: 166 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD--XVRKGDARLPLKWMAPETIF 223
Query: 523 TMVMTEKYDVYSFGVVTLEVL-MGKHP 548
V T + DV+SFGV+ E+ +G P
Sbjct: 224 DRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS----YGYIAPELAY 522
S +HRD+++ NILL+ K + DFG AR + D + G ++APE +
Sbjct: 166 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD--XVRKGDARLPLKWMAPETIF 223
Query: 523 TMVMTEKYDVYSFGVVTLEVL-MGKHP 548
V T + DV+SFGV+ E+ +G P
Sbjct: 224 DRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALKKLN-SPETE--------ELAFIRSFR--NEAQVLSQ 424
IG G YG VYKA+ G V ALKK+ ETE E++ ++ N ++L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 425 MERGS----LFRILHNDAEAVELDWAKRVNI----VKA----MAHALAYLHHDCSPSVVH 472
+ + +F LH D + +D + I +K+ + LA+ H S V+H
Sbjct: 71 IHTENKLYLVFEFLHQDLKDF-MDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYD 531
RD+ N+L+N++ +ADFG AR + Y APE L + D
Sbjct: 127 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 532 VYSFGVVTLEVL 543
++S G + E++
Sbjct: 187 IWSLGCIFAEMV 198
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR--------NEAQVLSQM 425
IG+GA G V Y A L R A+KKL+ P + R++R N ++S +
Sbjct: 31 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 426 ----------ERGSLFRILH-NDAE-----AVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
E ++ ++ DA +ELD + ++ M + +LH S
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 145
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
++HRD+ +NI++ S + DFG AR + Y Y APE+ M E
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKEN 204
Query: 530 YDVYSFGVVTLEVLMGK 546
D++S G + E++ K
Sbjct: 205 VDIWSVGCIMGEMVRHK 221
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS----YGYIAPELAY 522
S +HRD+++ NILL+ K + DFG AR + D + G ++APE +
Sbjct: 157 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD--XVRKGDARLPLKWMAPETIF 214
Query: 523 TMVMTEKYDVYSFGVVTLEVL-MGKHP 548
V T + DV+SFGV+ E+ +G P
Sbjct: 215 DRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS----YGYIAPELAY 522
S +HRD+++ NILL+ K + DFG AR + D + G ++APE +
Sbjct: 157 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD--XVRKGDARLPLKWMAPETIF 214
Query: 523 TMVMTEKYDVYSFGVVTLEVL-MGKHP 548
V T + DV+SFGV+ E+ +G P
Sbjct: 215 DRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR--------NEAQVLSQM 425
IG+GA G V Y A L R A+KKL+ P + R++R N ++S +
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 426 ----------ERGSLFRILH-NDAE-----AVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
E ++ ++ DA +ELD + ++ M + +LH S
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 147
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
++HRD+ +NI++ S + DFG AR + Y Y APE+ M E
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKEN 206
Query: 530 YDVYSFGVVTLEVLMGK 546
D++S G + E++ K
Sbjct: 207 VDIWSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR--------NEAQVLSQM 425
IG+GA G V Y A L R A+KKL+ P + R++R N ++S +
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 426 ----------ERGSLFRILH-NDAE-----AVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
E ++ ++ DA +ELD + ++ M + +LH S
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
++HRD+ +NI++ S + DFG AR + Y Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKEN 205
Query: 530 YDVYSFGVVTLEVLMGK 546
D++S G + E++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR--------NEAQVLSQM 425
IG+GA G V Y A L R A+KKL+ P + R++R N ++S +
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 426 ----------ERGSLFRILH-NDAE-----AVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
E ++ ++ DA +ELD + ++ M + +LH S
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
++HRD+ +NI++ S + DFG AR + Y Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKEN 205
Query: 530 YDVYSFGVVTLEVLMGK 546
D++S G + E++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR--------NEAQVLSQM 425
IG+GA G V Y A L R A+KKL+ P + R++R N ++S +
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 426 ----------ERGSLFRILH-NDAE-----AVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
E ++ ++ DA +ELD + ++ M + +LH S
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 184
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
++HRD+ +NI++ S + DFG AR + Y Y APE+ M E
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKEN 243
Query: 530 YDVYSFGVVTLEVLMGK 546
D++S G + E++ K
Sbjct: 244 VDIWSVGCIMGEMVRHK 260
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR--------NEAQVLSQM 425
IG+GA G V Y A L R A+KKL+ P + R++R N ++S +
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 426 ----------ERGSLFRILH-NDAE-----AVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
E ++ ++ DA +ELD + ++ M + +LH S
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 139
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
++HRD+ +NI++ S + DFG AR + Y Y APE+ M E
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKEN 198
Query: 530 YDVYSFGVVTLEVLMGK 546
D++S G + E++ K
Sbjct: 199 VDIWSVGCIMGEMVRHK 215
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 78/200 (39%), Gaps = 27/200 (13%)
Query: 376 CIGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL 434
IG G+Y V +L R++A+K + + I + E V Q L
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 435 HN--DAEAVELDWAKRVNIVKAMAH---------------------ALAYLHHDCSPSVV 471
H+ E+ + VN M H AL YLH ++
Sbjct: 76 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGII 132
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ +N+LL+S+ + D+G + + G+ YIAPE+ D
Sbjct: 133 YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVD 192
Query: 532 VYSFGVVTLEVLMGKHPRDL 551
++ GV+ E++ G+ P D+
Sbjct: 193 WWALGVLMFEMMAGRSPFDI 212
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR--------NEAQVLSQM 425
IG+GA G V Y A L R A+KKL+ P + R++R N ++S +
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 426 ----------ERGSLFRILH-NDAE-----AVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
E ++ ++ DA +ELD + ++ M + +LH S
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH---SAG 139
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
++HRD+ +NI++ S + DFG AR + Y Y APE+ M E
Sbjct: 140 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKEN 198
Query: 530 YDVYSFGVVTLEVLMGK 546
D++S G + E++ K
Sbjct: 199 VDIWSVGCIMGEMVRHK 215
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR--------NEAQVLSQM 425
IG+GA G V Y A L R A+KKL+ P + R++R N ++S +
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 426 ----------ERGSLFRILH-NDAE-----AVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
E ++ ++ DA +ELD + ++ M + +LH S
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 147
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
++HRD+ +NI++ S + DFG AR + Y Y APE+ M E
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKEN 206
Query: 530 YDVYSFGVVTLEVLMGK 546
D++S G + E++ K
Sbjct: 207 VDIWSVGCIMGEMVRHK 223
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 43/201 (21%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR----------------- 416
IG+GA G V Y A L R A+KKL+ P + R++R
Sbjct: 34 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 91
Query: 417 ------------NEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
+ ++ ++ +L +++ +ELD + ++ M + +LH
Sbjct: 92 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH- 145
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTM 524
S ++HRD+ +NI++ S + DFG AR + Y Y APE+ M
Sbjct: 146 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRY-YRAPEVILGM 202
Query: 525 VMTEKYDVYSFGVVTLEVLMG 545
E D++S G + E++ G
Sbjct: 203 GYKENVDIWSVGCIMGEMIKG 223
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR--------NEAQVLSQM 425
IG+GA G V Y A L R A+KKL+ P + R++R N ++S +
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 426 ----------ERGSLFRILH-NDAE-----AVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
E ++ ++ DA +ELD + ++ M + +LH S
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH---SAG 146
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
++HRD+ +NI++ S + DFG AR + Y Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKEN 205
Query: 530 YDVYSFGVVTLEVLMGK 546
D++S G + E++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 108/263 (41%), Gaps = 57/263 (21%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ A+K L E+ + F EA V+ +++ +
Sbjct: 219 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHPN 274
Query: 430 LFRILHNDAEAVE-------------LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L LD+ + N + A L Y+ S ++
Sbjct: 275 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 334
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY---GYIAPE-LAYTM 524
+HR++++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 335 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNK 392
Query: 525 VMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVL-----DQRL--PPPV 577
+ K DV++FGV+ E+ +T S P I L V D R+ P
Sbjct: 393 -FSIKSDVWAFGVLLWEI----------ATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 441
Query: 578 DRKVIQDILLVSTISFACLQSNP 600
KV + + AC Q NP
Sbjct: 442 PEKVYE-------LMRACWQWNP 457
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR--------NEAQVLSQM 425
IG+GA G V Y A L R A+KKL+ P + R++R N ++S +
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 426 ----------ERGSLFRILH-NDAE-----AVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
E ++ ++ DA +ELD + ++ M + +LH S
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 140
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
++HRD+ +NI++ S + DFG AR + Y Y APE+ M E
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKEN 199
Query: 530 YDVYSFGVVTLEVLMGK 546
D++S G + E++ K
Sbjct: 200 VDIWSVGCIMGEMVRHK 216
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 33/196 (16%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR--------NEAQVL--- 422
IG+GA G V Y A L R A+KKL+ P + R++R N ++
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 423 -------SQMERGSLFRILH------NDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
S E ++ ++ + +ELD + ++ M + +LH S
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH---SAG 146
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
++HRD+ +NI++ S + DFG AR + Y Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKEN 205
Query: 530 YDVYSFGVVTLEVLMG 545
D++S GV+ E++ G
Sbjct: 206 VDIWSVGVIMGEMIKG 221
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 78/200 (39%), Gaps = 27/200 (13%)
Query: 376 CIGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL 434
IG G+Y V +L R++A+K + + I + E V Q L
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 435 HN--DAEAVELDWAKRVNIVKAMAH---------------------ALAYLHHDCSPSVV 471
H+ E+ + VN M H AL YLH ++
Sbjct: 72 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGII 128
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ +N+LL+S+ + D+G + + G+ YIAPE+ D
Sbjct: 129 YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVD 188
Query: 532 VYSFGVVTLEVLMGKHPRDL 551
++ GV+ E++ G+ P D+
Sbjct: 189 WWALGVLMFEMMAGRSPFDI 208
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 43/201 (21%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR----------------- 416
IG+GA G V Y A L R A+KKL+ P + R++R
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 417 ------------NEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
+ ++ ++ +L +++ +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH- 143
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTM 524
S ++HRD+ +NI++ S + DFG AR + Y Y APE+ M
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGM 200
Query: 525 VMTEKYDVYSFGVVTLEVLMG 545
E D++S G + E++ G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 43/201 (21%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR----------------- 416
IG+GA G V Y A L R A+KKL+ P + R++R
Sbjct: 33 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 417 ------------NEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
+ ++ ++ +L +++ +ELD + ++ M + +LH
Sbjct: 91 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH- 144
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTM 524
S ++HRD+ +NI++ S + DFG AR + Y Y APE+ M
Sbjct: 145 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGM 201
Query: 525 VMTEKYDVYSFGVVTLEVLMG 545
E D++S G + E++ G
Sbjct: 202 GYKENVDIWSVGCIMGEMIKG 222
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR--------NEAQVLSQM 425
IG+GA G V Y A L R A+KKL+ P + R++R N ++S +
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 426 ----------ERGSLFRILH-NDAE-----AVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
E ++ ++ DA +ELD + ++ M + +LH S
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 140
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
++HRD+ +NI++ S + DFG AR + Y Y APE+ M E
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKEN 199
Query: 530 YDVYSFGVVTLEVLMGK 546
D++S G + E++ K
Sbjct: 200 VDIWSVGCIMGEMVRHK 216
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 34/201 (16%)
Query: 377 IGTGAYGSVYKA--QLPNGRV-FALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRI 433
+G G +GSV + ++ ++ A+K L + E A EAQ++ Q++ + R+
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLK--QGTEKADTEEMMREAQIMHQLDNPYIVRL 401
Query: 434 LH-NDAEAV---------------------ELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+ AEA+ E+ + ++ ++ + YL + V
Sbjct: 402 IGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFV 458
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL-AGSY--GYIAPELAYTMVMTE 528
HR++++ N+LL ++ A ++DFG ++ L AD S T AG + + APE +
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 518
Query: 529 KYDVYSFGVVTLEVL-MGKHP 548
+ DV+S+GV E L G+ P
Sbjct: 519 RSDVWSYGVTMWEALSYGQKP 539
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR--------NEAQVLSQM 425
IG+GA G V Y A L R A+KKL+ P + R++R N ++S +
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 426 ----------ERGSLFRILH-NDAE-----AVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
E ++ ++ DA +ELD + ++ M + +LH S
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH---SAG 146
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
++HRD+ +NI++ S + DFG AR + Y Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKEN 205
Query: 530 YDVYSFGVVTLEVLMGK 546
D++S G + E++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 32/207 (15%)
Query: 362 LSSMPTPRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQ 420
L SM +K++ IG G YG VYKA+ G V ALKK+ +TE + E
Sbjct: 2 LGSMENFQKVEK---IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREIS 57
Query: 421 VLSQMERGSLFRIL---HND------AEAVELDWAKRVN----------IVKA----MAH 457
+L ++ ++ ++L H + E + +D ++ ++K+ +
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIA 517
LA+ H S V+HRD+ N+L+N++ +ADFG AR + Y A
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 518 PE-LAYTMVMTEKYDVYSFGVVTLEVL 543
PE L + D++S G + E++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 412 IRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+ F++ V+ M+ +L +++H +ELD + ++ M + +LH S ++
Sbjct: 96 LEEFQDVYLVMELMD-ANLCQVIH-----MELDHERMSYLLYQMLCGIKHLH---SAGII 146
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
HRD+ +NI++ S + DFG AR + + Y Y APE+ M E D
Sbjct: 147 HRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRY-YRAPEVILGMGYKENVD 205
Query: 532 VYSFGVVTLEVLMG 545
++S G + E++ G
Sbjct: 206 IWSVGCIMGELVKG 219
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 32/207 (15%)
Query: 362 LSSMPTPRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQ 420
L SM +K++ IG G YG VYKA+ G V ALKK+ +TE + E
Sbjct: 1 LGSMENFQKVEK---IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREIS 56
Query: 421 VLSQMERGSLFRIL---HND------AEAVELDWAKRVN----------IVKA----MAH 457
+L ++ ++ ++L H + E + +D ++ ++K+ +
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIA 517
LA+ H S V+HRD+ N+L+N++ +ADFG AR + Y A
Sbjct: 117 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 518 PE-LAYTMVMTEKYDVYSFGVVTLEVL 543
PE L + D++S G + E++
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 175 NYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQ--- 231
N+ M+ L P +I + LD +N L + LT L+ LIL NQ
Sbjct: 306 NFTVSGTRMVHMLCPSKISPF---LHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKE 362
Query: 232 LSGLPQEIGNLKNLMLLDVGNNDI-----IGPIPSTLGLFSDLSYLDLSCNQFNSSIPNE 286
LS + + +K+L LD+ N + G T L S L++S N +I
Sbjct: 363 LSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLS----LNMSSNILTDTIFRC 418
Query: 287 LTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNL 346
L ++ LDL SNK+ IP Q+ +E L L++++N +K G +L+ L + L
Sbjct: 419 LPPRIKV--LDLHSNKIKS-IPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWL 475
Query: 347 SGNKLSG---RVPYSNKHLSSMPTPRKIDSKYCIGTG 380
N R+ Y ++ L+ + ++ S C G+G
Sbjct: 476 HTNPWDCSCPRIDYLSRWLNK-NSQKEQGSAKCSGSG 511
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 22/130 (16%)
Query: 60 SALSPIQLETKALLNTGWWNNSWTMDYDSDHCEWIGITCNSAGSIIGLHLSKDNVNFNGR 119
S ++ + + K+L NS + D C W S++ L++S +
Sbjct: 364 SKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSW-------TKSLLSLNMSSN------I 410
Query: 120 LSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLT 172
L+ F C P +++L + SIP ++ L LQ L+++SN+L+ RLT
Sbjct: 411 LTDTIFRCLP--PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLKSVPDGIFDRLT 468
Query: 173 NLNYMSLSRN 182
+L + L N
Sbjct: 469 SLQKIWLHTN 478
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS----YGYIAPELAY 522
S +HRD+++ NILL+ K + DFG AR + D + G ++APE +
Sbjct: 166 SRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD--XVRKGDARLPLKWMAPETIF 223
Query: 523 TMVMTEKYDVYSFGVVTLEVL-MGKHP 548
V T + DV+SFGV+ E+ +G P
Sbjct: 224 DRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 78/199 (39%), Gaps = 27/199 (13%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILH 435
IG G+Y V +L R++A+K + + I + E V Q LH
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 436 N--DAEAVELDWAKRVNIVKAMAH---------------------ALAYLHHDCSPSVVH 472
+ E+ + VN M H AL YLH +++
Sbjct: 88 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGIIY 144
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDV 532
RD+ +N+LL+S+ + D+G + + G+ YIAPE+ D
Sbjct: 145 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDW 204
Query: 533 YSFGVVTLEVLMGKHPRDL 551
++ GV+ E++ G+ P D+
Sbjct: 205 WALGVLMFEMMAGRSPFDI 223
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 43/201 (21%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR----------------- 416
IG+GA G V Y A L R A+KKL+ P + R++R
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 417 ------------NEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
+ ++ ++ +L +++ +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH- 143
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTM 524
S ++HRD+ +NI++ S + DFG AR + Y Y APE+ M
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGM 200
Query: 525 VMTEKYDVYSFGVVTLEVLMG 545
E D++S G + E++ G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 441 VELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500
+ELD + ++ M + +LH S ++HRD+ +NI++ S + DFG AR
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG 177
Query: 501 ADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMG 545
+ Y Y APE+ M E D++S GV+ E++ G
Sbjct: 178 TSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR--------NEAQVLSQM 425
IG+GA G V Y A L R A+KKL+ P + R++R N ++S +
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 426 ----------ERGSLFRILH-NDAE-----AVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
E ++ ++ DA +ELD + ++ M + +LH S
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
++HRD+ +NI++ S + DFG AR + Y Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKEN 205
Query: 530 YDVYSFGVVTLEVLMGK 546
D++S G + E++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
V M++G LF L E V L + I++A+ + LH ++VHRD+ NI
Sbjct: 89 VFDLMKKGELFDYL---TEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENI 142
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV------MTEKYDVYS 534
LL+ + + DFG + L + + G+ Y+APE+ + ++ D++S
Sbjct: 143 LLDDDMNIKLTDFGFSCQLDPGEKLRE-VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 201
Query: 535 FGVVTLEVLMGKHP 548
GV+ +L G P
Sbjct: 202 TGVIMYTLLAGSPP 215
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
V M++G LF L E V L + I++A+ + LH ++VHRD+ NI
Sbjct: 102 VFDLMKKGELFDYL---TEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENI 155
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV------MTEKYDVYS 534
LL+ + + DFG + L ++ + G+ Y+APE+ + ++ D++S
Sbjct: 156 LLDDDMNIKLTDFGFSCQLDPGEKLRS-VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214
Query: 535 FGVVTLEVLMGKHP 548
GV+ +L G P
Sbjct: 215 TGVIMYTLLAGSPP 228
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 108/263 (41%), Gaps = 57/263 (21%)
Query: 371 IDSKYCIGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGS 429
I K+ +G G YG VY+ A+K L E+ + F EA V+ +++ +
Sbjct: 261 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHPN 316
Query: 430 LFRILHNDAEAVE-------------LDWAKRVNIVKAMAHALAYLHHDCSPSV------ 470
L ++L LD+ + N + A L Y+ S ++
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 376
Query: 471 --VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY---GYIAPE-LAYTM 524
+HR++++ N L+ VADFG +RL+ D+ T AG+ + APE LAY
Sbjct: 377 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNK 434
Query: 525 VMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVL-----DQRL--PPPV 577
+ K DV++FGV+ E+ +T S P I L V D R+ P
Sbjct: 435 -FSIKSDVWAFGVLLWEI----------ATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 483
Query: 578 DRKVIQDILLVSTISFACLQSNP 600
KV + + AC Q NP
Sbjct: 484 PEKVYE-------LMRACWQWNP 499
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 469 SVVHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
VVHRD+ N+LL SKL+ +ADFG A + + AG+ GY++PE+
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
+ D+++ GV+ +L+G P
Sbjct: 201 YGKPVDLWACGVILYILLVGYPP 223
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 43/201 (21%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR----------------- 416
IG+GA G V Y A L R A+KKL+ P + R++R
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 417 ------------NEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
+ ++ ++ +L +++ +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH- 143
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTM 524
S ++HRD+ +NI++ S + DFG AR + Y Y APE+ M
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRY-YRAPEVILGM 200
Query: 525 VMTEKYDVYSFGVVTLEVLMG 545
E D++S G + E++ G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 89/219 (40%), Gaps = 38/219 (17%)
Query: 360 KHLSSMPTPRKIDSKY-CIGTGAYGSVYKAQL-PNGRVFA-------------------- 397
K L P + +Y +G G +G V Q+ G+++A
Sbjct: 174 KWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALN 233
Query: 398 ----LKKLNSPETEELAFIRSFRNE-AQVLSQMERGSL-FRILHNDAEAVELDWAKRVNI 451
L+K+NS LA+ ++ VL+ M G L F I H A+ V
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFY 291
Query: 452 VKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLA- 510
+ L LH + +V+RD+ NILL+ ++D G A +H QT+
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA--VHV-PEGQTIKGR 345
Query: 511 -GSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
G+ GY+APE+ T D ++ G + E++ G+ P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR--------NEAQVLSQM 425
IG+GA G V Y A L R A+KKL+ P + R++R N ++S +
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 426 ----------ERGSLFRILH-NDAE-----AVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
E ++ ++ DA +ELD + ++ M + +LH S
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
++HRD+ +NI++ S + DFG AR + Y Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKEN 205
Query: 530 YDVYSFGVVTLEVLMGK 546
D++S G + E++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 49/219 (22%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM----------- 425
IG G +G V +V A+K + + T + +F EA V++Q+
Sbjct: 20 IGKGEFGDVMLGDYRGNKV-AVKCIKNDATAQ-----AFLAEASVMTQLRHSNLVQLLGV 73
Query: 426 ---ERGSLFRILHNDAEAVELDWAKR-----------VNIVKAMAHALAYLHHDCSPSVV 471
E+G L+ + A+ +D+ + + + A+ YL + + V
Sbjct: 74 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFV 130
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
HRD+++ N+L++ A V+DFG L SS Q + APE + K D
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLPVKWTAPEALREAAFSTKSD 187
Query: 532 VYSFGVVTLEVL-MGKHPRDLHSTLSSSYDPKIMLIDVL 569
V+SFG++ E+ G+ P P+I L DV+
Sbjct: 188 VWSFGILLWEIYSFGRVPY-----------PRIPLKDVV 215
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 42/196 (21%)
Query: 380 GAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHN--- 436
G +G VYKAQ V A K+ ++EE + + E +L+ + ++ ++L
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCDHPNIVKLLDAFYY 78
Query: 437 ----------------DAEAVELDW---AKRVNIV-KAMAHALAYLHHDCSPSVVHRDIS 476
DA +EL+ ++ +V K AL YLH + ++HRD+
Sbjct: 79 ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLK 135
Query: 477 SNNILLNSKLEAFVADFG-TARLLHADSSNQTLLAGSYGYIAPELAYTMVMTE------- 528
+ NIL + +ADFG +A+ + G+ ++APE+ VM E
Sbjct: 136 AGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEV----VMCETSKDRPY 191
Query: 529 --KYDVYSFGVVTLEV 542
K DV+S G+ +E+
Sbjct: 192 DYKADVWSLGITLIEM 207
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 76/202 (37%), Gaps = 43/202 (21%)
Query: 377 IGTGAYGSVYKA-----QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER---- 427
+G G +GSV Q G V A+KKL E L R F E ++L ++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 74
Query: 428 -----------------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
GSL L E + D K + + + YL
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 130
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELA 521
+ +HRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 522 YTMVMTEKYDVYSFGVVTLEVL 543
+ DV+SFGVV E+
Sbjct: 190 TESKFSVASDVWSFGVVLYELF 211
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 89/219 (40%), Gaps = 38/219 (17%)
Query: 360 KHLSSMPTPRKIDSKY-CIGTGAYGSVYKAQL-PNGRVFA-------------------- 397
K L P + +Y +G G +G V Q+ G+++A
Sbjct: 174 KWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALN 233
Query: 398 ----LKKLNSPETEELAFIRSFRNE-AQVLSQMERGSL-FRILHNDAEAVELDWAKRVNI 451
L+K+NS LA+ ++ VL+ M G L F I H A+ V
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFY 291
Query: 452 VKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLA- 510
+ L LH + +V+RD+ NILL+ ++D G A +H QT+
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA--VHV-PEGQTIKGR 345
Query: 511 -GSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
G+ GY+APE+ T D ++ G + E++ G+ P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIA 517
AL YLH +++RD+ +N+LL+S+ + D+G + + G+ YIA
Sbjct: 165 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIA 221
Query: 518 PELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ 571
PE+ D ++ GV+ E++ G+ P D+ + SS +P D L Q
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI---VGSSDNPDQNTEDYLFQ 272
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 34/205 (16%)
Query: 374 KYCIGTGAYGSVYKAQLPNGRVFALKKLNSPET-----EELAFIRSFRNEAQVLSQM--E 426
K +G GA G++ + + R A+K++ PE E+ +R V+ E
Sbjct: 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRI-LPECFSFADREVQLLRESDEHPNVIRYFCTE 87
Query: 427 RGSLFRILHNDAEAVEL-------DWA----KRVNIVKAMAHALAYLHHDCSPSVVHRDI 475
+ F+ + + A L D+A + + +++ LA+LH S ++VHRD+
Sbjct: 88 KDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDL 144
Query: 476 SSNNILL-----NSKLEAFVADFGTARLLHADS---SNQTLLAGSYGYIAPELAYTMVM- 526
+NIL+ + K++A ++DFG + L S ++ + G+ G+IAPE+
Sbjct: 145 KPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKE 204
Query: 527 --TEKYDVYSFGVVTLEVL-MGKHP 548
T D++S G V V+ G HP
Sbjct: 205 NPTYTVDIFSAGCVFYYVISEGSHP 229
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 33/196 (16%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR--------NEAQVL--- 422
IG+GA G V Y A L R A+KKL+ P + R++R N ++
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 423 -------SQMERGSLFRILH------NDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
S E ++ ++ + +ELD + ++ M + +LH S
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
++HRD+ +NI++ S + DFG AR + Y Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKEN 205
Query: 530 YDVYSFGVVTLEVLMG 545
D++S G + E++ G
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 95/243 (39%), Gaps = 62/243 (25%)
Query: 361 HLSSMPTPRKIDSKY------------------------CIGTGAYGSVYKAQL-PNGRV 395
HL P +DSKY +G G +G V+ Q+ G++
Sbjct: 153 HLGQAPFQEFLDSKYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKL 212
Query: 396 FA------------------------LKKLNSPETEELAFIRSFRNE-AQVLSQMERGSL 430
+A L K++S LA+ + + V++ M G +
Sbjct: 213 YACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDI 272
Query: 431 -FRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAF 489
+ I + D + + + + L +LH ++++RD+ N+LL+
Sbjct: 273 RYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVR 329
Query: 490 VADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDV----YSFGVVTLEVLMG 545
++D G A L A + AG+ G++APEL ++ E+YD ++ GV E++
Sbjct: 330 ISDLGLAVELKAGQTKTKGYAGTPGFMAPEL----LLGEEYDFSVDYFALGVTLYEMIAA 385
Query: 546 KHP 548
+ P
Sbjct: 386 RGP 388
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
V+ ++ G LF + + + + + I+K++ A+ YLH S ++ HRD+ N+
Sbjct: 107 VMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKPENL 162
Query: 481 LLNSKLEAFV---ADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGV 537
L SK + DFG A+ + +S T Y Y+APE+ + D++S GV
Sbjct: 163 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGV 221
Query: 538 VTLEVLMGKHP 548
+ +L G P
Sbjct: 222 IMYILLCGYPP 232
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
V+ ++ G LF + + + + + I+K++ A+ YLH S ++ HRD+ N+
Sbjct: 99 VMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKPENL 154
Query: 481 LLNSKLEAFV---ADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGV 537
L SK + DFG A+ + +S T Y Y+APE+ + D++S GV
Sbjct: 155 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGV 213
Query: 538 VTLEVLMGKHP 548
+ +L G P
Sbjct: 214 IMYILLCGYPP 224
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 369 RKIDSKYCIGTGAYGSVYKAQLPN------GRVFALKKLNSPETEELAFIRSFRNEAQVL 422
R I K+ +G GA+G V+ A+ N + A+K L E E A + F+ EA++L
Sbjct: 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK--EASESA-RQDFQREAELL 97
Query: 423 SQ-------------------------MERGSLFRILHN------------DAEAVELDW 445
+ M G L R L + D L
Sbjct: 98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157
Query: 446 AKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS-- 503
+ + + +A + YL VHRD+++ N L+ L + DFG +R +++
Sbjct: 158 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 214
Query: 504 --SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
+T+L ++ PE T + DV+SFGVV E+ GK P
Sbjct: 215 RVGGRTML--PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 42/204 (20%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHN 436
IG+G +G V+ N A+K + E FI EA+V+ ++ L ++
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFI----EEAEVMMKLSHPKLVQLY-- 68
Query: 437 DAEAVELDWAKRVNIVKAMAHA----------------------------LAYLHHDCSP 468
V L+ A + + M H +AYL
Sbjct: 69 ---GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---A 122
Query: 469 SVVHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNQTLLAGSYGYIAPELAYTMVMT 527
SV+HRD+++ N L+ V+DFG R + D ++ T + +PE+ +
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 528 EKYDVYSFGVVTLEVL-MGKHPRD 550
K DV+SFGV+ EV GK P +
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYE 206
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 43/202 (21%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR----------------- 416
IG+GA G V Y A L R A+KKL+ P + R++R
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 417 ------------NEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
+ ++ ++ +L +++ +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH- 143
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTM 524
S ++HRD+ +NI++ S + DFG AR + + Y Y APE+ M
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-YRAPEVILGM 200
Query: 525 VMTEKYDVYSFGVVTLEVLMGK 546
E D++S G + E++ K
Sbjct: 201 GYKENVDIWSVGCIMGEMVCHK 222
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
V+ ++ G LF + + + + + I+K++ A+ YLH S ++ HRD+ N+
Sbjct: 97 VMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKPENL 152
Query: 481 LLNSKLEAFV---ADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGV 537
L SK + DFG A+ + +S T Y Y+APE+ + D++S GV
Sbjct: 153 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGV 211
Query: 538 VTLEVLMGKHP 548
+ +L G P
Sbjct: 212 IMYILLCGYPP 222
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
V+ ++ G LF + + + + + I+K++ A+ YLH S ++ HRD+ N+
Sbjct: 137 VMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKPENL 192
Query: 481 LLNSKLEAFV---ADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGV 537
L SK + DFG A+ + +S T Y Y+APE+ + D++S GV
Sbjct: 193 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGV 251
Query: 538 VTLEVLMGKHP 548
+ +L G P
Sbjct: 252 IMYILLCGYPP 262
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 87/203 (42%), Gaps = 38/203 (18%)
Query: 377 IGTGAYGSVYKAQL-PNGRVFA------------------------LKKLNSPETEELAF 411
+G G +G V+ Q+ G+++A L K++S LA+
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 412 IRSFRNE-AQVLSQMERGSL-FRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
+ + V++ M G + + I + D + + + + L +LH +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---N 309
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
+++RD+ N+LL+ ++D G A L A + AG+ G++APEL ++ E+
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL----LLGEE 365
Query: 530 YDV----YSFGVVTLEVLMGKHP 548
YD ++ GV E++ + P
Sbjct: 366 YDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 456 AHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGY 515
A ++ L H ++++RD+ N+LL+ ++D G A L A + AG+ G+
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGF 355
Query: 516 IAPELAYTMVMTEKYDV----YSFGVVTLEVLMGKHP 548
+APEL ++ E+YD ++ GV E++ + P
Sbjct: 356 MAPEL----LLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
V+ ++ G LF + + + + + I+K++ A+ YLH S ++ HRD+ N+
Sbjct: 92 VMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKPENL 147
Query: 481 LLNSKLEAFV---ADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGV 537
L SK + DFG A+ + +S T Y Y+APE+ + D++S GV
Sbjct: 148 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGV 206
Query: 538 VTLEVLMGKHP 548
+ +L G P
Sbjct: 207 IMYILLCGYPP 217
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
V+ ++ G LF + + + + + I+K++ A+ YLH S ++ HRD+ N+
Sbjct: 91 VMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKPENL 146
Query: 481 LLNSKLEAFV---ADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGV 537
L SK + DFG A+ + +S T Y Y+APE+ + D++S GV
Sbjct: 147 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGV 205
Query: 538 VTLEVLMGKHP 548
+ +L G P
Sbjct: 206 IMYILLCGYPP 216
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 456 AHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGY 515
A ++ L H ++++RD+ N+LL+ ++D G A L A + AG+ G+
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGF 355
Query: 516 IAPELAYTMVMTEKYDV----YSFGVVTLEVLMGKHP 548
+APEL ++ E+YD ++ GV E++ + P
Sbjct: 356 MAPEL----LLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
V+ ++ G LF + + + + + I+K++ A+ YLH S ++ HRD+ N+
Sbjct: 98 VMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKPENL 153
Query: 481 LLNSKLEAFV---ADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGV 537
L SK + DFG A+ + +S T Y Y+APE+ + D++S GV
Sbjct: 154 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGV 212
Query: 538 VTLEVLMGKHP 548
+ +L G P
Sbjct: 213 IMYILLCGYPP 223
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
V M++G LF L E V L + I++A+ + LH ++VHRD+ NI
Sbjct: 102 VFDLMKKGELFDYL---TEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENI 155
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV------MTEKYDVYS 534
LL+ + + DFG + L + + G+ Y+APE+ + ++ D++S
Sbjct: 156 LLDDDMNIKLTDFGFSCQLDPGEKLRE-VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214
Query: 535 FGVVTLEVLMGKHP 548
GV+ +L G P
Sbjct: 215 TGVIMYTLLAGSPP 228
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 8/117 (6%)
Query: 435 HNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFG 494
H D A+ + ++ ++ + YL S+VHRD+++ NIL+ + ++DFG
Sbjct: 141 HPDERALTM--GDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFG 195
Query: 495 TARLLHADSSNQTLLAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
+R ++ + S G ++A E + + T + DV+SFGV+ E++ +G +P
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 28/196 (14%)
Query: 377 IGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFR--- 432
IG G YG+V+KA+ + ALK++ + +E + R E +L +++ ++ R
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELKHKNIVRLHD 68
Query: 433 ILHNDA------EAVELDWAKRVN---------IVKA----MAHALAYLHHDCSPSVVHR 473
+LH+D E + D K + IVK+ + L + H S +V+HR
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHR 125
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAY-TMVMTEKYDV 532
D+ N+L+N E +A+FG AR + + Y P++ + + + D+
Sbjct: 126 DLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185
Query: 533 YSFGVVTLEVLMGKHP 548
+S G + E+ P
Sbjct: 186 WSAGCIFAELANAGRP 201
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
V+ ++ G LF + + + + + I+K++ A+ YLH S ++ HRD+ N+
Sbjct: 143 VMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKPENL 198
Query: 481 LLNSKLEAFV---ADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGV 537
L SK + DFG A+ + +S T Y Y+APE+ + D++S GV
Sbjct: 199 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGV 257
Query: 538 VTLEVLMGKHP 548
+ +L G P
Sbjct: 258 IMYILLCGYPP 268
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 369 RKIDSKYCIGTGAYGSVYKAQLPN------GRVFALKKLNSPETEELAFIRSFRNEAQVL 422
R I K+ +G GA+G V+ A+ N + A+K L E E A + F+ EA++L
Sbjct: 12 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK--EASESA-RQDFQREAELL 68
Query: 423 SQ-------------------------MERGSLFRILHN------------DAEAVELDW 445
+ M G L R L + D L
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 128
Query: 446 AKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS-- 503
+ + + +A + YL VHRD+++ N L+ L + DFG +R +++
Sbjct: 129 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 185
Query: 504 --SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
+T+L ++ PE T + DV+SFGVV E+ GK P
Sbjct: 186 RVGGRTML--PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS-- 512
+A +A+L S + +HRD+++ NILL + DFG AR + DS+ ++ G+
Sbjct: 170 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN--YVVKGNAR 224
Query: 513 --YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
++APE + V T + DV+S+G+ E+ +G P
Sbjct: 225 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 263
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
V+ ++ G LF + + + + + I+K++ A+ YLH S ++ HRD+ N+
Sbjct: 93 VMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKPENL 148
Query: 481 LLNSKLEAFV---ADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGV 537
L SK + DFG A+ + +S T Y Y+APE+ + D++S GV
Sbjct: 149 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGV 207
Query: 538 VTLEVLMGKHP 548
+ +L G P
Sbjct: 208 IMYILLCGYPP 218
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
V+ ++ G LF + + + + + I+K++ A+ YLH S ++ HRD+ N+
Sbjct: 93 VMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKPENL 148
Query: 481 LLNSKLEAFV---ADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGV 537
L SK + DFG A+ + +S T Y Y+APE+ + D++S GV
Sbjct: 149 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGV 207
Query: 538 VTLEVLMGKHP 548
+ +L G P
Sbjct: 208 IMYILLCGYPP 218
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 369 RKIDSKYCIGTGAYGSVYKAQLPN------GRVFALKKLNSPETEELAFIRSFRNEAQVL 422
R I K+ +G GA+G V+ A+ N + A+K L E E A + F+ EA++L
Sbjct: 18 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK--EASESA-RQDFQREAELL 74
Query: 423 SQ-------------------------MERGSLFRILHN------------DAEAVELDW 445
+ M G L R L + D L
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 134
Query: 446 AKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS-- 503
+ + + +A + YL VHRD+++ N L+ L + DFG +R +++
Sbjct: 135 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 191
Query: 504 --SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
+T+L ++ PE T + DV+SFGVV E+ GK P
Sbjct: 192 RVGGRTML--PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 33/196 (16%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR--------NEAQVL--- 422
IG+GA G V Y A L R A+KKL+ P + R++R N ++
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 423 -------SQMERGSLFRILH------NDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
S E ++ ++ + +ELD + ++ M + +LH S
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
++HRD+ +NI++ S + DFG AR + Y Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKEN 205
Query: 530 YDVYSFGVVTLEVLMG 545
D++S G + E++ G
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 7/138 (5%)
Query: 216 LSRLTSLKILILAQNQLSGLP----QEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSY 271
L LT+L LIL NQL LP ++ NLK L+L++ N + ++L+Y
Sbjct: 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVE---NQLQSLPDGVFDKLTNLTY 137
Query: 272 LDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSI 331
L L NQ S +LT L LDL +N+L + L L L++N +K
Sbjct: 138 LYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVP 197
Query: 332 PGEITKLSRLDYLNLSGN 349
G +L+ L ++ L N
Sbjct: 198 DGVFDRLTSLTHIWLLNN 215
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Query: 124 NFSCFPNLESLRILAYYDGFTGSIPSEI-SALSKLQLLDLSSNRLRG-------RLTNLN 175
+ S L +L L S+P+ + L+ L+ L L N+L+ +LTNL
Sbjct: 77 DISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLT 136
Query: 176 YMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGL 235
Y+ L N L L L NL LD+ +N L +LT LK L L NQL +
Sbjct: 137 YLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSV 196
Query: 236 PQEI 239
P +
Sbjct: 197 PDGV 200
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 8/120 (6%)
Query: 119 RLSHLNFSCFPNLESLRILAYYDGFTGSIPSEI-SALSKLQLLDLSSNRLRG-------R 170
+L L F L +L+ L + S+P + L+ L L L N+L+ +
Sbjct: 96 QLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDK 155
Query: 171 LTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQN 230
LTNL + L N L L L L +L + DN L RLTSL + L N
Sbjct: 156 LTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVPDGVFDRLTSLTHIWLLNN 215
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIA 517
AL YLH + +VV+RD+ N++L+ + DFG + D + G+ Y+A
Sbjct: 263 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 320
Query: 518 PELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
PE+ D + GVV E++ G+ P
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS-- 512
+A +A+L S + +HRD+++ NILL + DFG AR + DS+ ++ G+
Sbjct: 177 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSN--YVVKGNAR 231
Query: 513 --YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
++APE + V T + DV+S+G+ E+ +G P
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 10/112 (8%)
Query: 442 ELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501
EL ++ ++I + +A + YL S VHRD+++ N L+ L + DFG +R +++
Sbjct: 124 ELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYS 180
Query: 502 DS----SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
T+L ++ PE T + DV+S GVV E+ GK P
Sbjct: 181 TDYYRVGGHTML--PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 20/145 (13%)
Query: 407 EELAFIRSFRNEAQVLSQMERGSLF---RILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
+ L F+ + N ++ + R +F R AE V AL YLH
Sbjct: 221 DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS---------------ALDYLH 265
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYT 523
+ +VV+RD+ N++L+ + DFG + D + G+ Y+APE+
Sbjct: 266 SE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED 323
Query: 524 MVMTEKYDVYSFGVVTLEVLMGKHP 548
D + GVV E++ G+ P
Sbjct: 324 NDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 36/201 (17%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSL------ 430
+GTG +G V + A+K + E FI EA+V+ + L
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLVQLYGV 87
Query: 431 -------FRILHNDAEAVELDWAKRV----------NIVKAMAHALAYLHHDCSPSVVHR 473
F I A L++ + + + K + A+ YL S +HR
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 144
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKY 530
D+++ N L+N + V+DFG +R + D ++ GS + PE+ + K
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSV--GSKFPVRWSPPEVLMYSKFSSKS 202
Query: 531 DVYSFGVVTLEVL-MGKHPRD 550
D+++FGV+ E+ +GK P +
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYE 223
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS-- 512
+A +A+L S + +HRD+++ NILL + DFG AR + DS+ ++ G+
Sbjct: 172 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN--YVVKGNAR 226
Query: 513 --YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
++APE + V T + DV+S+G+ E+ +G P
Sbjct: 227 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 265
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 33/196 (16%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR--------NEAQVL--- 422
IG+GA G V Y A L R A+KKL+ P + R++R N ++
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 423 -------SQMERGSLFRILH------NDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
S E ++ ++ + +ELD + ++ M + +LH S
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
++HRD+ +NI++ S + DFG AR + Y Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKEN 205
Query: 530 YDVYSFGVVTLEVLMG 545
D++S G + E++ G
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 49/219 (22%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM----------- 425
IG G +G V +V A+K + + T + +F EA V++Q+
Sbjct: 14 IGKGEFGDVMLGDYRGNKV-AVKCIKNDATAQ-----AFLAEASVMTQLRHSNLVQLLGV 67
Query: 426 ---ERGSLFRILHNDAEAVELDWAKR-----------VNIVKAMAHALAYLHHDCSPSVV 471
E+G L+ + A+ +D+ + + + A+ YL + + V
Sbjct: 68 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFV 124
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
HRD+++ N+L++ A V+DFG L SS Q + APE + K D
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSD 181
Query: 532 VYSFGVVTLEVL-MGKHPRDLHSTLSSSYDPKIMLIDVL 569
V+SFG++ E+ G+ P P+I L DV+
Sbjct: 182 VWSFGILLWEIYSFGRVPY-----------PRIPLKDVV 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 20/145 (13%)
Query: 407 EELAFIRSFRNEAQVLSQMERGSLF---RILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
+ L F+ + N ++ + R +F R AE V AL YLH
Sbjct: 81 DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS---------------ALDYLH 125
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYT 523
+ +VV+RD+ N++L+ + DFG + D + G+ Y+APE+
Sbjct: 126 SE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLED 183
Query: 524 MVMTEKYDVYSFGVVTLEVLMGKHP 548
D + GVV E++ G+ P
Sbjct: 184 NDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 20/145 (13%)
Query: 407 EELAFIRSFRNEAQVLSQMERGSLF---RILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
+ L F+ + N ++ + R +F R AE V AL YLH
Sbjct: 83 DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS---------------ALDYLH 127
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYT 523
+ +VV+RD+ N++L+ + DFG + D + G+ Y+APE+
Sbjct: 128 SE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLED 185
Query: 524 MVMTEKYDVYSFGVVTLEVLMGKHP 548
D + GVV E++ G+ P
Sbjct: 186 NDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS-- 512
+A +A+L S + +HRD+++ NILL + DFG AR + DS+ ++ G+
Sbjct: 177 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN--YVVKGNAR 231
Query: 513 --YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
++APE + V T + DV+S+G+ E+ +G P
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS-- 512
+A +A+L S + +HRD+++ NILL + DFG AR + DS+ ++ G+
Sbjct: 154 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN--YVVKGNAR 208
Query: 513 --YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
++APE + V T + DV+S+G+ E+ +G P
Sbjct: 209 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 85/217 (39%), Gaps = 53/217 (24%)
Query: 370 KIDSKYCIGTGAYGSVYKA-------QLPNGRVFALKKLNSPETEELAFIRS---FRNEA 419
KI +G G++G VY+ P RV A+K +N E A +R F NEA
Sbjct: 11 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVN-----EAASMRERIEFLNEA 64
Query: 420 QVLSQ-------------------------MERG-------SLFRILHNDAEAVELDWAK 447
V+ + M RG SL + N+ +K
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 124
Query: 448 RVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQT 507
+ + +A +AYL+ + VHRD+++ N ++ + DFG R + +
Sbjct: 125 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 181
Query: 508 LLAG--SYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
G +++PE V T DV+SFGVV E+
Sbjct: 182 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 33/196 (16%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR--------NEAQVL--- 422
IG+GA G V Y A L R A+KKL+ P + R++R N ++
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 423 -------SQMERGSLFRILH------NDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS 469
S E ++ ++ + +ELD + ++ M + +LH S
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH---SAG 146
Query: 470 VVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEK 529
++HRD+ +NI++ S + DFG AR + Y Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKEN 205
Query: 530 YDVYSFGVVTLEVLMG 545
D++S G + E++ G
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 44/204 (21%)
Query: 377 IGTGAYGSVYKA-QLPNGRVFALK--KLNSPE------TEELAFIRSFRNEAQVLSQMER 427
+G G Y +VYK G ALK KL+S E E++ ++ ++E V
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIV------ 66
Query: 428 GSLFRILHND------AEAVELDWAK--------------RVNIVK----AMAHALAYLH 463
L+ ++H + E ++ D K +N+VK + LA+ H
Sbjct: 67 -RLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH 125
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAY 522
+ ++HRD+ N+L+N + + + DFG AR + + + Y AP+ L
Sbjct: 126 EN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG 182
Query: 523 TMVMTEKYDVYSFGVVTLEVLMGK 546
+ + D++S G + E++ GK
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 15/118 (12%)
Query: 443 LDWAKR----VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILL--NSKLEAFVADFGTA 496
LD+ +R NI++ + AL YLH+ + HRDI N L N E + DFG +
Sbjct: 161 LDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLS 217
Query: 497 RLLH----ADSSNQTLLAGSYGYIAPELAYTMVMT--EKYDVYSFGVVTLEVLMGKHP 548
+ + + T AG+ ++APE+ T + K D +S GV+ +LMG P
Sbjct: 218 KEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGY 515
L ++H +VHRD+ N+LL SK + +ADFG A + + AG+ GY
Sbjct: 140 LESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGY 199
Query: 516 IAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
++PE+ + D+++ GV+ +L+G P
Sbjct: 200 LSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 49/219 (22%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM----------- 425
IG G +G V +V A+K + + T + +F EA V++Q+
Sbjct: 29 IGKGEFGDVMLGDYRGNKV-AVKCIKNDATAQ-----AFLAEASVMTQLRHSNLVQLLGV 82
Query: 426 ---ERGSLFRILHNDAEAVELDWAKR-----------VNIVKAMAHALAYLHHDCSPSVV 471
E+G L+ + A+ +D+ + + + A+ YL + + V
Sbjct: 83 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFV 139
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
HRD+++ N+L++ A V+DFG L SS Q + APE + K D
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSD 196
Query: 532 VYSFGVVTLEVL-MGKHPRDLHSTLSSSYDPKIMLIDVL 569
V+SFG++ E+ G+ P P+I L DV+
Sbjct: 197 VWSFGILLWEIYSFGRVPY-----------PRIPLKDVV 224
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 43/202 (21%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR----------------- 416
IG+GA G V Y A L R A+KKL+ P + R++R
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 417 ------------NEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
+ ++ ++ +L +++ +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH- 143
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTM 524
S ++HRD+ +NI++ S + DFG AR + + Y Y APE+ M
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-YRAPEVILGM 200
Query: 525 VMTEKYDVYSFGVVTLEVLMGK 546
E D++S G + E++ K
Sbjct: 201 GYKENVDLWSVGCIMGEMVCHK 222
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
V+ ++ G LF + + + + + I+K++ A+ YLH S ++ HRD+ N+
Sbjct: 91 VMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKPENL 146
Query: 481 LLNSKLEAFV---ADFGTARLLHADSSNQTLLAGSYG--YIAPELAYTMVMTEKYDVYSF 535
L SK + DFG A+ +S+ +L Y Y+APE+ + D++S
Sbjct: 147 LYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 536 GVVTLEVLMGKHP 548
GV+ +L G P
Sbjct: 204 GVIMYILLCGYPP 216
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 54/211 (25%)
Query: 377 IGTGAYGSV----YKAQLPNGRVFALKKLNS-------------PETEELAFIRS----- 414
IG GA+G V +KA + +V+A+K L+ E + +AF S
Sbjct: 83 IGRGAFGEVQLVRHKA---SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 139
Query: 415 ----FRNEA---QVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCS 467
F+++ V+ M G L ++ N V WAK + AL +H S
Sbjct: 140 LFCAFQDDKYLYMVMEYMPGGDLVNLMSN--YDVPEKWAKFY--TAEVVLALDAIH---S 192
Query: 468 PSVVHRDISSNNILLNSKLEAFVADFGTAR------LLHADSSNQTLLAGSYGYIAPELA 521
++HRD+ +N+LL+ +ADFGT ++H D++ G+ YI+PE+
Sbjct: 193 MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA-----VGTPDYISPEVL 247
Query: 522 YTMVMTEKY----DVYSFGVVTLEVLMGKHP 548
+ Y D +S GV E+L+G P
Sbjct: 248 KSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 20/145 (13%)
Query: 407 EELAFIRSFRNEAQVLSQMERGSLF---RILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
+ L F+ + N ++ + R +F R AE V AL YLH
Sbjct: 82 DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS---------------ALDYLH 126
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYT 523
+ +VV+RD+ N++L+ + DFG + D + G+ Y+APE+
Sbjct: 127 SE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLED 184
Query: 524 MVMTEKYDVYSFGVVTLEVLMGKHP 548
D + GVV E++ G+ P
Sbjct: 185 NDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 84/209 (40%), Gaps = 51/209 (24%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER--------- 427
IG G YG V+ + G A+K + TEE ++ R VL + E
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFT--TEEASWFRETEIYQTVLMRHENILGFIAADI 101
Query: 428 ---GSLFRI-----------LHNDAEAVELDWAKRVNIVKAMAHALAYLHHDC-----SP 468
GS ++ L++ ++ LD + + + L +LH + P
Sbjct: 102 KGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKP 161
Query: 469 SVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL----LAGSYGYIAPEL---- 520
++ HRD+ S NIL+ +AD G A +D++ + G+ Y+ PE+
Sbjct: 162 AIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDES 221
Query: 521 -------AYTMVMTEKYDVYSFGVVTLEV 542
+Y M D+YSFG++ EV
Sbjct: 222 LNRNHFQSYIMA-----DMYSFGLILWEV 245
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 85/217 (39%), Gaps = 53/217 (24%)
Query: 370 KIDSKYCIGTGAYGSVYKA-------QLPNGRVFALKKLNSPETEELAFIRS---FRNEA 419
KI +G G++G VY+ P RV A+K +N E A +R F NEA
Sbjct: 13 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVN-----EAASMRERIEFLNEA 66
Query: 420 QVLSQ-------------------------MERGSLFRIL-------HNDAEAVELDWAK 447
V+ + M RG L L N+ +K
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 448 RVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQT 507
+ + +A +AYL+ + VHRD+++ N ++ + DFG R ++ +
Sbjct: 127 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 183
Query: 508 LLAG--SYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
G +++PE V T DV+SFGVV E+
Sbjct: 184 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 49/219 (22%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM----------- 425
IG G +G V +V A+K + + T + +F EA V++Q+
Sbjct: 201 IGKGEFGDVMLGDYRGNKV-AVKCIKNDATAQ-----AFLAEASVMTQLRHSNLVQLLGV 254
Query: 426 ---ERGSLFRILHNDAEAVELDWAKR-----------VNIVKAMAHALAYLHHDCSPSVV 471
E+G L+ + A+ +D+ + + + A+ YL + + V
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFV 311
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
HRD+++ N+L++ A V+DFG L SS Q + APE + K D
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSD 368
Query: 532 VYSFGVVTLEVL-MGKHPRDLHSTLSSSYDPKIMLIDVL 569
V+SFG++ E+ G+ P P+I L DV+
Sbjct: 369 VWSFGILLWEIYSFGRVPY-----------PRIPLKDVV 396
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 453 KAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAG 511
+ + L +LH +P ++HRD+ +NI + + + D G A L A + + G
Sbjct: 136 RQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVI--G 192
Query: 512 SYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
+ + APE Y E DVY+FG LE ++P
Sbjct: 193 TPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 76/202 (37%), Gaps = 43/202 (21%)
Query: 377 IGTGAYGSVYKA-----QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER---- 427
+G G +GSV Q G V A+KKL E L R F E ++L ++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 75
Query: 428 -----------------------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
GSL L E + D K + + + YL
Sbjct: 76 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL-- 131
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELA 521
+ +HR++++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 132 -GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 522 YTMVMTEKYDVYSFGVVTLEVL 543
+ DV+SFGVV E+
Sbjct: 191 TESKFSVASDVWSFGVVLYELF 212
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 36/201 (17%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSL------ 430
+GTG +G V + A+K + E FI EA+V+ + L
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLVQLYGV 72
Query: 431 -------FRILHNDAEAVELDWAKRV----------NIVKAMAHALAYLHHDCSPSVVHR 473
F I A L++ + + + K + A+ YL S +HR
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 129
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKY 530
D+++ N L+N + V+DFG +R + D ++ GS + PE+ + K
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV--GSKFPVRWSPPEVLMYSKFSSKS 187
Query: 531 DVYSFGVVTLEVL-MGKHPRD 550
D+++FGV+ E+ +GK P +
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYE 208
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 13/103 (12%)
Query: 453 KAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS 512
+ + A+ Y H +VHRD+ + N+LL++ + +ADFG + T GS
Sbjct: 118 RQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT-FCGS 173
Query: 513 YGYIAPELAYTMVMTEKY-----DVYSFGVVTLEVLMGKHPRD 550
Y APEL +KY DV+S GV+ ++ G P D
Sbjct: 174 PPYAAPEL----FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 36/201 (17%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSL------ 430
+GTG +G V + A+K + E FI EA+V+ + L
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLVQLYGV 71
Query: 431 -------FRILHNDAEAVELDWAKRV----------NIVKAMAHALAYLHHDCSPSVVHR 473
F I A L++ + + + K + A+ YL S +HR
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 128
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKY 530
D+++ N L+N + V+DFG +R + D ++ GS + PE+ + K
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV--GSKFPVRWSPPEVLMYSKFSSKS 186
Query: 531 DVYSFGVVTLEVL-MGKHPRD 550
D+++FGV+ E+ +GK P +
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYE 207
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 36/201 (17%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSL------ 430
+GTG +G V + A+K + E FI EA+V+ + L
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLVQLYGV 87
Query: 431 -------FRILHNDAEAVELDWAKRV----------NIVKAMAHALAYLHHDCSPSVVHR 473
F I A L++ + + + K + A+ YL S +HR
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 144
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKY 530
D+++ N L+N + V+DFG +R + D ++ GS + PE+ + K
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV--GSKFPVRWSPPEVLMYSKFSSKS 202
Query: 531 DVYSFGVVTLEVL-MGKHPRD 550
D+++FGV+ E+ +GK P +
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYE 223
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 53/218 (24%)
Query: 369 RKIDSKYCIGTGAYGSVYKA-------QLPNGRVFALKKLNSPETEELAFIRS---FRNE 418
KI +G G++G VY+ P RV A+K +N E A +R F NE
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVN-----EAASMRERIEFLNE 78
Query: 419 AQVLSQ-------------------------MERGSLFRIL-------HNDAEAVELDWA 446
A V+ + M RG L L N+ +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 138
Query: 447 KRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQ 506
K + + +A +AYL+ + VHRD+++ N ++ + DFG R ++ +
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 195
Query: 507 TLLAG--SYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
G +++PE V T DV+SFGVV E+
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 36/201 (17%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSL------ 430
+GTG +G V + A+K + E FI EA+V+ + L
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLVQLYGV 67
Query: 431 -------FRILHNDAEAVELDWAKRV----------NIVKAMAHALAYLHHDCSPSVVHR 473
F I A L++ + + + K + A+ YL S +HR
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 124
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKY 530
D+++ N L+N + V+DFG +R + D ++ GS + PE+ + K
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV--GSKFPVRWSPPEVLMYSKFSSKS 182
Query: 531 DVYSFGVVTLEVL-MGKHPRD 550
D+++FGV+ E+ +GK P +
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYE 203
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 53/218 (24%)
Query: 369 RKIDSKYCIGTGAYGSVYKA-------QLPNGRVFALKKLNSPETEELAFIRS---FRNE 418
KI +G G++G VY+ P RV A+K +N E A +R F NE
Sbjct: 18 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVN-----EAASMRERIEFLNE 71
Query: 419 AQVLSQ-------------------------MERGSLFRIL-------HNDAEAVELDWA 446
A V+ + M RG L L N+ +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 447 KRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQ 506
K + + +A +AYL+ + VHRD+++ N ++ + DFG R ++ +
Sbjct: 132 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 188
Query: 507 TLLAG--SYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
G +++PE V T DV+SFGVV E+
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 53/218 (24%)
Query: 369 RKIDSKYCIGTGAYGSVYKA-------QLPNGRVFALKKLNSPETEELAFIRS---FRNE 418
KI +G G++G VY+ P RV A+K +N E A +R F NE
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVN-----EAASMRERIEFLNE 78
Query: 419 AQVLSQ-------------------------MERG-------SLFRILHNDAEAVELDWA 446
A V+ + M RG SL + N+ +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 138
Query: 447 KRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQ 506
K + + +A +AYL+ + VHRD+++ N ++ + DFG R ++ +
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 195
Query: 507 TLLAG--SYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
G +++PE V T DV+SFGVV E+
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 450 NIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFV---ADFGTARLLHADSSNQ 506
I K++ A+ YLH S ++ HRD+ N+L SK + DFG A+ + +S
Sbjct: 165 EIXKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 221
Query: 507 TLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
T Y Y+APE+ + D +S GV+ +L G P
Sbjct: 222 TPCYTPY-YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPP 262
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 85/217 (39%), Gaps = 53/217 (24%)
Query: 370 KIDSKYCIGTGAYGSVYKA-------QLPNGRVFALKKLNSPETEELAFIRS---FRNEA 419
KI +G G++G VY+ P RV A+K +N E A +R F NEA
Sbjct: 17 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVN-----EAASMRERIEFLNEA 70
Query: 420 QVLSQ-------------------------MERGSLFRIL-------HNDAEAVELDWAK 447
V+ + M RG L L N+ +K
Sbjct: 71 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 130
Query: 448 RVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQT 507
+ + +A +AYL+ + VHRD+++ N ++ + DFG R ++ +
Sbjct: 131 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 187
Query: 508 LLAG--SYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
G +++PE V T DV+SFGVV E+
Sbjct: 188 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 43/202 (21%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR----------------- 416
IG+GA G V Y A L R A+KKL+ P + R++R
Sbjct: 37 IGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 94
Query: 417 ------------NEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
+ ++ ++ +L +++ +ELD + ++ M + +LH
Sbjct: 95 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH- 148
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTM 524
S ++HRD+ +NI++ S + DFG AR + Y Y APE+ M
Sbjct: 149 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGM 205
Query: 525 VMTEKYDVYSFGVVTLEVLMGK 546
E D++S G + E++ K
Sbjct: 206 GYKENVDLWSVGCIMGEMVCHK 227
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 33/200 (16%)
Query: 377 IGTGAYGSVYKA-----------QLPNGRVFALKKLNSPETEELAFIRSFR--------- 416
+G G++G V A ++ N +V A + E++++R R
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 417 -----NEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+E ++ + LF + + E + A+R + + A+ Y H +V
Sbjct: 81 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE-ARR--FFQQIISAVEYCHRH---KIV 134
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKY 530
HRD+ N+LL+ L +ADFG + ++ D + GS Y APE ++ + +
Sbjct: 135 HRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 193
Query: 531 DVYSFGVVTLEVLMGKHPRD 550
DV+S GV+ +L + P D
Sbjct: 194 DVWSCGVILYVMLCRRLPFD 213
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 33/200 (16%)
Query: 377 IGTGAYGSVYKA-----------QLPNGRVFALKKLNSPETEELAFIRSFR--------- 416
+G G++G V A ++ N +V A + E++++R R
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 417 -----NEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+E ++ + LF + + E + A+R + + A+ Y H +V
Sbjct: 76 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE-ARR--FFQQIISAVEYCHRH---KIV 129
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKY 530
HRD+ N+LL+ L +ADFG + ++ D + GS Y APE ++ + +
Sbjct: 130 HRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 188
Query: 531 DVYSFGVVTLEVLMGKHPRD 550
DV+S GV+ +L + P D
Sbjct: 189 DVWSCGVILYVMLCRRLPFD 208
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 36/201 (17%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSL------ 430
+GTG +G V + A+K + E FI EA+V+ + L
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLVQLYGV 78
Query: 431 -------FRILHNDAEAVELDWAKRV----------NIVKAMAHALAYLHHDCSPSVVHR 473
F I A L++ + + + K + A+ YL S +HR
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 135
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKY 530
D+++ N L+N + V+DFG +R + D ++ GS + PE+ + K
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV--GSKFPVRWSPPEVLMYSKFSSKS 193
Query: 531 DVYSFGVVTLEVL-MGKHPRD 550
D+++FGV+ E+ +GK P +
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYE 214
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 84/217 (38%), Gaps = 53/217 (24%)
Query: 370 KIDSKYCIGTGAYGSVYKA-------QLPNGRVFALKKLNSPETEELAFIRS---FRNEA 419
KI +G G++G VY+ P RV A+K +N E A +R F NEA
Sbjct: 20 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVN-----EAASMRERIEFLNEA 73
Query: 420 QVLSQ-------------------------MERGSLFRIL-------HNDAEAVELDWAK 447
V+ + M RG L L N+ +K
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 448 RVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQT 507
+ + +A +AYL+ + VHRD+++ N ++ + DFG R + +
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 190
Query: 508 LLAG--SYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
G +++PE V T DV+SFGVV E+
Sbjct: 191 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 33/200 (16%)
Query: 377 IGTGAYGSVYKA-----------QLPNGRVFALKKLNSPETEELAFIRSFR--------- 416
+G G++G V A ++ N +V A + E++++R R
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 417 -----NEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+E ++ + LF + + E + A+R + + A+ Y H +V
Sbjct: 72 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE-ARR--FFQQIISAVEYCHRH---KIV 125
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKY 530
HRD+ N+LL+ L +ADFG + ++ D + GS Y APE ++ + +
Sbjct: 126 HRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 184
Query: 531 DVYSFGVVTLEVLMGKHPRD 550
DV+S GV+ +L + P D
Sbjct: 185 DVWSCGVILYVMLCRRLPFD 204
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 43/202 (21%)
Query: 377 IGTGAYGSV---YKAQLPNGRVFALKKLNSPETEELAFIRSFR----------------- 416
IG+GA G V Y A L R A+KKL+ P + R++R
Sbjct: 26 IGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 417 ------------NEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHH 464
+ ++ ++ +L +++ +ELD + ++ M + +LH
Sbjct: 84 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH- 137
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTM 524
S ++HRD+ +NI++ S + DFG AR + Y Y APE+ M
Sbjct: 138 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGM 194
Query: 525 VMTEKYDVYSFGVVTLEVLMGK 546
E D++S G + E++ K
Sbjct: 195 GYKENVDLWSVGCIMGEMVCHK 216
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 97/218 (44%), Gaps = 19/218 (8%)
Query: 147 IPSEISALSKLQLLDLSSNRLR-------GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLI 199
+P IS + +LL+L N+++ L +L + LSRN + + L NL
Sbjct: 58 VPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLN 115
Query: 200 ELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEIGN-LKNLMLLDVGNNDIIGP 258
L++ DN L L+ LK L L N + +P N + +L LD+G +
Sbjct: 116 TLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSY 175
Query: 259 IPSTLGLF---SDLSYLDLS-CNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASM 314
I G F S+L YL+L+ CN IPN LT L +L LDLS N LS P +
Sbjct: 176 ISE--GAFEGLSNLRYLNLAMCNL--REIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGL 230
Query: 315 EDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLS 352
L L + + I+ L L +NL+ N L+
Sbjct: 231 MHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT 268
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 8/148 (5%)
Query: 215 TLSRLTSLKILILAQNQLSGLPQEIG---NLKNLMLLDVGNNDIIGPIPSTLGLFSDLSY 271
+ L L+IL L++N + + EIG L NL L++ +N + S L
Sbjct: 83 SFKHLRHLEILQLSRNHIRTI--EIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKE 140
Query: 272 LDLSCNQFNSSIPNELTRLTQLFHLDLSS-NKLSGKIPSQIASMEDLTWLDLSNNNIKGS 330
L L N S R+ L LDL +LS + +L +L+L+ N++
Sbjct: 141 LWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-E 199
Query: 331 IPGEITKLSRLDYLNLSGNKLSGRVPYS 358
IP +T L +LD L+LSGN LS P S
Sbjct: 200 IPN-LTPLIKLDELDLSGNHLSAIRPGS 226
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 11/100 (11%)
Query: 449 VNIVKAMAHALAYL--HHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQ 506
V++V +A + YL HH VVH+D+++ N+L+ KL ++D G R ++A +
Sbjct: 131 VHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYA-ADYY 184
Query: 507 TLLAGS---YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
LL S ++APE + D++S+GVV EV
Sbjct: 185 KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 224
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 33/200 (16%)
Query: 377 IGTGAYGSVYKA-----------QLPNGRVFALKKLNSPETEELAFIRSFR--------- 416
+G G++G V A ++ N +V A + E++++R R
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 417 -----NEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+E ++ + LF + + E + A+R + + A+ Y H +V
Sbjct: 82 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE-ARR--FFQQIISAVEYCHRH---KIV 135
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKY 530
HRD+ N+LL+ L +ADFG + ++ D + GS Y APE ++ + +
Sbjct: 136 HRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 194
Query: 531 DVYSFGVVTLEVLMGKHPRD 550
DV+S GV+ +L + P D
Sbjct: 195 DVWSCGVILYVMLCRRLPFD 214
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 13/107 (12%)
Query: 443 LDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH-- 500
L A+++ I + +A +AYL VHRD+++ N L+ + +ADFG +R ++
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 501 ----ADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
AD ++ + ++ PE + T + DV+++GVV E+
Sbjct: 228 DYYKADGNDAIPIR----WMPPESIFYNRYTTESDVWAYGVVLWEIF 270
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 11/100 (11%)
Query: 449 VNIVKAMAHALAYL--HHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQ 506
V++V +A + YL HH VVH+D+++ N+L+ KL ++D G R ++A +
Sbjct: 148 VHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYA-ADYY 201
Query: 507 TLLAGS---YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
LL S ++APE + D++S+GVV EV
Sbjct: 202 KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 241
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 85/217 (39%), Gaps = 53/217 (24%)
Query: 370 KIDSKYCIGTGAYGSVYKA-------QLPNGRVFALKKLNSPETEELAFIRS---FRNEA 419
KI +G G++G VY+ P RV A+K +N E A +R F NEA
Sbjct: 19 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVN-----EAASMRERIEFLNEA 72
Query: 420 QVLSQ-------------------------MERGSLFRIL-------HNDAEAVELDWAK 447
V+ + M RG L L N+ +K
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 448 RVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQT 507
+ + +A +AYL+ + VHRD+++ N ++ + DFG R ++ +
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
Query: 508 LLAG--SYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
G +++PE V T DV+SFGVV E+
Sbjct: 190 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 85/217 (39%), Gaps = 53/217 (24%)
Query: 370 KIDSKYCIGTGAYGSVYKA-------QLPNGRVFALKKLNSPETEELAFIRS---FRNEA 419
KI +G G++G VY+ P RV A+K +N E A +R F NEA
Sbjct: 20 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVN-----EAASMRERIEFLNEA 73
Query: 420 QVLSQ-------------------------MERGSLFRIL-------HNDAEAVELDWAK 447
V+ + M RG L L N+ +K
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 448 RVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQT 507
+ + +A +AYL+ + VHRD+++ N ++ + DFG R ++ +
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 190
Query: 508 LLAG--SYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
G +++PE V T DV+SFGVV E+
Sbjct: 191 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 10/134 (7%)
Query: 412 IRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
+ F++ V+ M+ +L +++H +ELD + ++ M + +LH S ++
Sbjct: 98 LEEFQDVYLVMELMD-ANLCQVIH-----MELDHERMSYLLYQMLCGIKHLH---SAGII 148
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
HRD+ +NI++ S + DFG AR + + Y Y APE+ M D
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRY-YRAPEVILGMGYAANVD 207
Query: 532 VYSFGVVTLEVLMG 545
++S G + E++ G
Sbjct: 208 IWSVGCIMGELVKG 221
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 14/144 (9%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN---QTLLAG 511
+A + YL S +HRD+++ N+LL ++ + DFG R L + + Q
Sbjct: 124 VAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 512 SYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLD 570
+ + APE T + D + FGV E+ G+ P + + + ID
Sbjct: 181 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEG 235
Query: 571 QRLPPPVDRKVIQDILLVSTISFA 594
+RLP P D QDI V +A
Sbjct: 236 ERLPRPED--CPQDIYNVMVQCWA 257
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 435 HNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFG 494
H D A+ + ++ ++ + YL +VHRD+++ NIL+ + ++DFG
Sbjct: 141 HPDERALTM--GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 495 TARLLHADSSNQTLLAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
+R ++ + S G ++A E + + T + DV+SFGV+ E++ +G +P
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 7/85 (8%)
Query: 469 SVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS----YGYIAPELAYTM 524
S VHRD+++ N+L+ + DFG AR + +DS+ ++ G+ ++APE +
Sbjct: 192 SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN--YVVRGNARLPVKWMAPESLFEG 249
Query: 525 VMTEKYDVYSFGVVTLEVL-MGKHP 548
+ T K DV+S+G++ E+ +G +P
Sbjct: 250 IYTIKSDVWSYGILLWEIFSLGVNP 274
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 52/263 (19%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHN 436
IG+G V++ +++A+K +N E + + S+RNE L+++++ S I
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHSDKIIRLY 78
Query: 437 DAEAVE-----------------------LDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
D E + +D +R + K M A+ +H +VH
Sbjct: 79 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHS 135
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSN--QTLLAGSYGYIAPELAYTMVMTEK-- 529
D+ N L+ + + DFG A + D+++ + G+ Y+ PE M + +
Sbjct: 136 DLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 194
Query: 530 ---------YDVYSFGVVTLEVLMGKHP-RDLHSTLSSSYDPKIMLIDVLDQRLPPPVDR 579
DV+S G + + GK P + + + +S + +ID + P +
Sbjct: 195 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH----AIIDPNHEIEFPDIPE 250
Query: 580 KVIQDILLVSTISFACLQSNPKS 602
K +QD+L CL+ +PK
Sbjct: 251 KDLQDVLK------CCLKRDPKQ 267
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 85/217 (39%), Gaps = 53/217 (24%)
Query: 370 KIDSKYCIGTGAYGSVYKA-------QLPNGRVFALKKLNSPETEELAFIRS---FRNEA 419
KI +G G++G VY+ P RV A+K +N E A +R F NEA
Sbjct: 16 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVN-----EAASMRERIEFLNEA 69
Query: 420 QVLSQ-------------------------MERGSLFRILH-------NDAEAVELDWAK 447
V+ + M RG L L N+ +K
Sbjct: 70 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 129
Query: 448 RVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQT 507
+ + +A +AYL+ + VHRD+++ N ++ + DFG R ++ +
Sbjct: 130 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 186
Query: 508 LLAG--SYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
G +++PE V T DV+SFGVV E+
Sbjct: 187 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 63/139 (45%), Gaps = 23/139 (16%)
Query: 443 LDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD 502
L+W V I K M YL +VHR++++ N+LL S + VADFG A LL D
Sbjct: 136 LNWG--VQIAKGMY----YLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 186
Query: 503 SSNQTLLAGS---YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPR--------- 549
Q L + + ++A E + T + DV+S+GV E++ G P
Sbjct: 187 -DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP 245
Query: 550 DLHSTLSSSYDPKIMLIDV 568
DL P+I IDV
Sbjct: 246 DLLEKGERLAQPQICTIDV 264
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 421 VLSQMERGSLF-RILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNN 479
++ ME G LF RI +A A I++ + A+ +LH S ++ HRD+ N
Sbjct: 104 IMECMEGGELFSRIQERGDQAFTEREA--AEIMRDIGTAIQFLH---SHNIAHRDVKPEN 158
Query: 480 ILLNSKLEAFV---ADFGTARLLHADSSNQTLLAGSYG--YIAPELAYTMVMTEKYDVYS 534
+L SK + V DFG A+ +++ L Y Y+APE+ + D++S
Sbjct: 159 LLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWS 214
Query: 535 FGVVTLEVLMGKHP 548
GV+ +L G P
Sbjct: 215 LGVIMYILLCGFPP 228
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 421 VLSQMERGSLF-RILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNN 479
++ ME G LF RI +A A I++ + A+ +LH S ++ HRD+ N
Sbjct: 85 IMECMEGGELFSRIQERGDQAFTEREA--AEIMRDIGTAIQFLH---SHNIAHRDVKPEN 139
Query: 480 ILLNSKLEAFV---ADFGTARLLHADSSNQTLLAGSYG--YIAPELAYTMVMTEKYDVYS 534
+L SK + V DFG A+ +++ L Y Y+APE+ + D++S
Sbjct: 140 LLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWS 195
Query: 535 FGVVTLEVLMGKHP 548
GV+ +L G P
Sbjct: 196 LGVIMYILLCGFPP 209
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 36/201 (17%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSL------ 430
+GTG +G V + A+K + E FI EA+V+ + L
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLVQLYGV 72
Query: 431 -------FRILHNDAEAVELDWAKRV----------NIVKAMAHALAYLHHDCSPSVVHR 473
F I A L++ + + + K + A+ YL S +HR
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 129
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS---YGYIAPELAYTMVMTEKY 530
D+++ N L+N + V+DFG +R + D + GS + PE+ + K
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS--RGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 531 DVYSFGVVTLEVL-MGKHPRD 550
D+++FGV+ E+ +GK P +
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYE 208
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 92/225 (40%), Gaps = 47/225 (20%)
Query: 370 KIDSKYCIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETE-------ELAFIRSF------ 415
++ + + G + VY+AQ + +GR +ALK+L S E E E+ F++
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 416 -----------------RNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA 458
+ E +L+++ +G L L L + I A
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLL-----HADSSNQTLLAGSY 513
+ ++H P ++HRD+ N+LL+++ + DFG+A + ++ S+ + L
Sbjct: 149 VQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEE 207
Query: 514 -------GYIAPE---LAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y PE L + EK D+++ G + + +HP
Sbjct: 208 ITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLAGSYGYIAPELAY 522
H S +V HRDI +N+L+N + DFG+A+ L N + Y Y APEL +
Sbjct: 146 HLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY-YRAPELIF 204
Query: 523 -TMVMTEKYDVYSFGVVTLEVLMGK 546
T D++S G + E+++G+
Sbjct: 205 GNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 14/144 (9%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS-- 512
+A + YL S +HRD+++ N+LL ++ + DFG R L + + +
Sbjct: 130 VAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV 186
Query: 513 -YGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLD 570
+ + APE T + D + FGV E+ G+ P + + + ID
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEG 241
Query: 571 QRLPPPVDRKVIQDILLVSTISFA 594
+RLP P D QDI V +A
Sbjct: 242 ERLPRPED--CPQDIYNVMVQCWA 263
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 63/139 (45%), Gaps = 23/139 (16%)
Query: 443 LDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD 502
L+W V I K M YL +VHR++++ N+LL S + VADFG A LL D
Sbjct: 118 LNWG--VQIAKGMY----YLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168
Query: 503 SSNQTLLAGS---YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPR--------- 549
Q L + + ++A E + T + DV+S+GV E++ G P
Sbjct: 169 -DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP 227
Query: 550 DLHSTLSSSYDPKIMLIDV 568
DL P+I IDV
Sbjct: 228 DLLEKGERLAQPQICTIDV 246
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 424 QME---RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
QME +G+L + + +LD + + + + + Y+H S ++HRD+ +NI
Sbjct: 112 QMEFCDKGTLEQWIEK-RRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNI 167
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTL 540
L + + DFG L D +T G+ Y++PE + ++ D+Y+ G++
Sbjct: 168 FLVDTKQVKIGDFGLVTSLKND-GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILA 226
Query: 541 EVL 543
E+L
Sbjct: 227 ELL 229
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 14/144 (9%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS-- 512
+A + YL S +HRD+++ N+LL ++ + DFG R L + + +
Sbjct: 120 VAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV 176
Query: 513 -YGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLD 570
+ + APE T + D + FGV E+ G+ P + + + ID
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEG 231
Query: 571 QRLPPPVDRKVIQDILLVSTISFA 594
+RLP P D QDI V +A
Sbjct: 232 ERLPRPED--CPQDIYNVMVQCWA 253
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 470 VVHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVM 526
VVHR++ N+LL SKL+ +ADFG A + + AG+ GY++PE+
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 190
Query: 527 TEKYDVYSFGVVTLEVLMGKHP 548
+ D+++ GV+ +L+G P
Sbjct: 191 GKPVDLWACGVILYILLVGYPP 212
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 14/144 (9%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN---QTLLAG 511
+A + YL S +HRD+++ N+LL ++ + DFG R L + + Q
Sbjct: 124 VAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 512 SYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRDLHSTLSSSYDPKIMLIDVLD 570
+ + APE T + D + FGV E+ G+ P + + + ID
Sbjct: 181 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEG 235
Query: 571 QRLPPPVDRKVIQDILLVSTISFA 594
+RLP P D QDI V +A
Sbjct: 236 ERLPRPED--CPQDIYNVMVQCWA 257
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 52/263 (19%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHN 436
IG+G V++ +++A+K +N E + + S+RNE L+++++ S I
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHSDKIIRLY 74
Query: 437 DAEAVE-----------------------LDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
D E + +D +R + K M A+ +H +VH
Sbjct: 75 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHS 131
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSN--QTLLAGSYGYIAPELAYTMVMTEK-- 529
D+ N L+ + + DFG A + D+++ + G+ Y+ PE M + +
Sbjct: 132 DLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 190
Query: 530 ---------YDVYSFGVVTLEVLMGKHP-RDLHSTLSSSYDPKIMLIDVLDQRLPPPVDR 579
DV+S G + + GK P + + + +S + +ID + P +
Sbjct: 191 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH----AIIDPNHEIEFPDIPE 246
Query: 580 KVIQDILLVSTISFACLQSNPKS 602
K +QD+L CL+ +PK
Sbjct: 247 KDLQDVLK------CCLKRDPKQ 263
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 87/217 (40%), Gaps = 53/217 (24%)
Query: 370 KIDSKYCIGTGAYGSVYKA-------QLPNGRVFALKKLNSPETEELAFIRS---FRNEA 419
KI +G G++G VY+ P RV A+K +N E A +R F NEA
Sbjct: 48 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVN-----EAASMRERIEFLNEA 101
Query: 420 QVLSQ-------------------------MERGSLFRILHNDAEAVELD-------WAK 447
V+ + M RG L L + +E + +K
Sbjct: 102 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 161
Query: 448 RVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQT 507
+ + +A +AYL+ + VHRD+++ N ++ + DFG R ++ +
Sbjct: 162 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 218
Query: 508 LLAG--SYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
G +++PE V T DV+SFGVV E+
Sbjct: 219 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 14/144 (9%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN---QTLLAG 511
+A + YL S +HRD+++ N+LL ++ + DFG R L + + Q
Sbjct: 130 VAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 186
Query: 512 SYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLD 570
+ + APE T + D + FGV E+ G+ P + + + ID
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEG 241
Query: 571 QRLPPPVDRKVIQDILLVSTISFA 594
+RLP P D QDI V +A
Sbjct: 242 ERLPRPED--CPQDIYNVMVQCWA 263
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 435 HNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFG 494
H D A+ + ++ ++ + YL +VHRD+++ NIL+ + ++DFG
Sbjct: 141 HPDERALTM--GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 495 TARLLHADSSNQTLLAGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
+R ++ + S G ++A E + + T + DV+SFGV+ E++ +G +P
Sbjct: 196 LSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 17/151 (11%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN---QTLLAG 511
+A + YL S +HRD+++ N+LL ++ + DFG R L + + Q
Sbjct: 120 VAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 512 SYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRDLHSTLSSSYDPKIMLIDVLD 570
+ + APE T + D + FGV E+ G+ P + + + ID
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEG 231
Query: 571 QRLPPPVDRKVIQDILLVSTISFACLQSNPK 601
+RLP P D QDI + C P+
Sbjct: 232 ERLPRPED--CPQDIY---NVMVQCWAHKPE 257
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 52/263 (19%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHN 436
IG+G V++ +++A+K +N E + + S+RNE L+++++ S I
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 437 DAEAVE-----------------------LDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
D E + +D +R + K M A+ +H +VH
Sbjct: 95 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHS 151
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSN--QTLLAGSYGYIAPELAYTMVMTEK-- 529
D+ N L+ + + DFG A + D+++ + G+ Y+ PE M + +
Sbjct: 152 DLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 210
Query: 530 ---------YDVYSFGVVTLEVLMGKHP-RDLHSTLSSSYDPKIMLIDVLDQRLPPPVDR 579
DV+S G + + GK P + + + +S + +ID + P +
Sbjct: 211 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH----AIIDPNHEIEFPDIPE 266
Query: 580 KVIQDILLVSTISFACLQSNPKS 602
K +QD+L CL+ +PK
Sbjct: 267 KDLQDVLK------CCLKRDPKQ 283
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 24/121 (19%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS-------------KLEAFVADFGT 495
+++++ +A +A+LH S ++HRD+ NIL+++ L ++DFG
Sbjct: 136 ISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 496 ARLLHADS----SNQTLLAGSYGYIAPEL---AYTMVMTEKYDVYSFGVVTLEVL-MGKH 547
+ L + N +G+ G+ APEL + +T D++S G V +L GKH
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 548 P 548
P
Sbjct: 253 P 253
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 13/103 (12%)
Query: 453 KAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS 512
+ + A+ Y H +VHRD+ + N+LL+ + +ADFG + + T GS
Sbjct: 121 RQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT-FCGS 176
Query: 513 YGYIAPELAYTMVMTEKY-----DVYSFGVVTLEVLMGKHPRD 550
Y APEL +KY DV+S GV+ ++ G P D
Sbjct: 177 PPYAAPEL----FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 24/121 (19%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS-------------KLEAFVADFGT 495
+++++ +A +A+LH S ++HRD+ NIL+++ L ++DFG
Sbjct: 136 ISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 496 ARLLHADS----SNQTLLAGSYGYIAPEL---AYTMVMTEKYDVYSFGVVTLEVL-MGKH 547
+ L + N +G+ G+ APEL + +T D++S G V +L GKH
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 548 P 548
P
Sbjct: 253 P 253
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 14/144 (9%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN---QTLLAG 511
+A + YL S +HRD+++ N+LL ++ + DFG R L + + Q
Sbjct: 120 VAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 512 SYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHPRDLHSTLSSSYDPKIMLIDVLD 570
+ + APE T + D + FGV E+ G+ P + + + ID
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEG 231
Query: 571 QRLPPPVDRKVIQDILLVSTISFA 594
+RLP P D QDI V +A
Sbjct: 232 ERLPRPED--CPQDIYNVMVQCWA 253
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 52/263 (19%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHN 436
IG+G V++ +++A+K +N E + + S+RNE L+++++ S I
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 437 DAEAVE-----------------------LDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
D E + +D +R + K M A+ +H +VH
Sbjct: 76 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHS 132
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSN--QTLLAGSYGYIAPELAYTMVMTEK-- 529
D+ N L+ + + DFG A + D+++ + G+ Y+ PE M + +
Sbjct: 133 DLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 191
Query: 530 ---------YDVYSFGVVTLEVLMGKHP-RDLHSTLSSSYDPKIMLIDVLDQRLPPPVDR 579
DV+S G + + GK P + + + +S + +ID + P +
Sbjct: 192 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH----AIIDPNHEIEFPDIPE 247
Query: 580 KVIQDILLVSTISFACLQSNPKS 602
K +QD+L CL+ +PK
Sbjct: 248 KDLQDVLK------CCLKRDPKQ 264
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 28/125 (22%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS-------------KLEAFVADFGT 495
+++++ +A +A+LH S ++HRD+ NIL+++ L ++DFG
Sbjct: 118 ISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 496 ARLLHA-DSSNQTLL---AGSYGYIAPE-------LAYTMVMTEKYDVYSFGVVTLEVL- 543
+ L + SS +T L +G+ G+ APE L +T D++S G V +L
Sbjct: 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 544 MGKHP 548
GKHP
Sbjct: 235 KGKHP 239
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 453 KAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS 512
+ + A+ Y H +VHRD+ + N+LL++ + +ADFG + + T GS
Sbjct: 120 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-FCGS 175
Query: 513 YGYIAPELAYTMVMTEKY-----DVYSFGVVTLEVLMGKHPRD 550
Y APEL +KY DV+S GV+ ++ G P D
Sbjct: 176 PPYAAPEL----FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 52/263 (19%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHN 436
IG+G V++ +++A+K +N E + + S+RNE L+++++ S I
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 437 DAEAVE-----------------------LDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
D E + +D +R + K M A+ +H +VH
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHS 179
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSN--QTLLAGSYGYIAPELAYTMVMTEK-- 529
D+ N L+ + + DFG A + D+++ + G+ Y+ PE M + +
Sbjct: 180 DLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 238
Query: 530 ---------YDVYSFGVVTLEVLMGKHP-RDLHSTLSSSYDPKIMLIDVLDQRLPPPVDR 579
DV+S G + + GK P + + + +S + +ID + P +
Sbjct: 239 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH----AIIDPNHEIEFPDIPE 294
Query: 580 KVIQDILLVSTISFACLQSNPKS 602
K +QD+L CL+ +PK
Sbjct: 295 KDLQDVLK------CCLKRDPKQ 311
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 453 KAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS 512
+ + A+ Y H +VHRD+ + N+LL++ + +ADFG + + T GS
Sbjct: 113 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-FCGS 168
Query: 513 YGYIAPELAYTMVMTEKY-----DVYSFGVVTLEVLMGKHPRD 550
Y APEL +KY DV+S GV+ ++ G P D
Sbjct: 169 PPYAAPEL----FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 453 KAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS 512
+ + A+ Y H +VHRD+ + N+LL++ + +ADFG + + T GS
Sbjct: 120 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-FCGS 175
Query: 513 YGYIAPELAYTMVMTEKY-----DVYSFGVVTLEVLMGKHPRD 550
Y APEL +KY DV+S GV+ ++ G P D
Sbjct: 176 PPYAAPEL----FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 81/205 (39%), Gaps = 41/205 (20%)
Query: 377 IGTGAYGSVYKAQL------PNGRVFALKKLNS--PETEELAF------IRSFRNEAQV- 421
+G GA+G VY+ Q+ P+ A+K L E +EL F I F ++ V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 422 --------------LSQMERGSLFRILHN----DAEAVELDWAKRVNIVKAMAHALAYLH 463
L M G L L ++ L +++ + +A YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNQTLLAG--SYGYIAP 518
+ +HRDI++ N LL VA DFG AR ++ S + ++ P
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL 543
E + T K D +SFGV+ E+
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIF 231
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 453 KAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS 512
+ + A+ Y H +VHRD+ + N+LL++ + +ADFG + + T GS
Sbjct: 120 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-FCGS 175
Query: 513 YGYIAPELAYTMVMTEKY-----DVYSFGVVTLEVLMGKHPRD 550
Y APEL +KY DV+S GV+ ++ G P D
Sbjct: 176 PPYAAPEL----FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
+ + +A +AYL+ + VHRD+++ N ++ + DFG R ++ + +
Sbjct: 133 IQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKG 189
Query: 509 LAG--SYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
G ++APE V T D++SFGVV E+
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
Query: 377 IGTGAYGSVYK-AQLPNGRVFALKKLNSPETEELAFIR-------------------SFR 416
+GTGA+G V++ + G FA K + +P + +R +F
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 417 NEAQ---VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
++ + + M G LF + ++ + D A V ++ + L ++H + + VH
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA--VEYMRQVCKGLCHMHEN---NYVHL 279
Query: 474 DISSNNILLNSKL--EAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
D+ NI+ +K E + DFG L S + + G+ + APE+A + D
Sbjct: 280 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK-VTTGTAEFAAPEVAEGKPVGYYTD 338
Query: 532 VYSFGVVTLEVLMGKHP 548
++S GV++ +L G P
Sbjct: 339 MWSVGVLSYILLSGLSP 355
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 109/253 (43%), Gaps = 16/253 (6%)
Query: 113 NVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG--- 169
N N +L +N + FP+L L I + L LQ LDLS + +
Sbjct: 308 NANSFDQLCQINAASFPSLRDLYIKGNMRKLDLGTRC-LEKLENLQKLDLSHSDIEASDC 366
Query: 170 ------RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLT-LSRLTSL 222
L +L Y++LS N GL Q L LDV L P + L L
Sbjct: 367 CNLQLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLL 426
Query: 223 KILILAQNQLSGLPQEI-GNLKNLMLLDV-GNNDIIGPIPST--LGLFSDLSYLDLSCNQ 278
++L L+ L Q + L++L L++ GN+ G I T L + L L LS
Sbjct: 427 RVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCN 486
Query: 279 FNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKL 338
S L + HLDLS N L+G ++ ++ L +L++++NNI+ P + L
Sbjct: 487 LLSIDQQAFHGLRNVNHLDLSHNSLTGDSMDALSHLKGL-YLNMASNNIRIIPPHLLPAL 545
Query: 339 SRLDYLNLSGNKL 351
S+ +NLS N L
Sbjct: 546 SQQSIINLSHNPL 558
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 84/217 (38%), Gaps = 53/217 (24%)
Query: 370 KIDSKYCIGTGAYGSVYKA-------QLPNGRVFALKKLNSPETEELAFIRS---FRNEA 419
KI +G G++G VY+ P RV A+K +N E A +R F NEA
Sbjct: 13 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVN-----EAASMRERIEFLNEA 66
Query: 420 QVLSQ-------------------------MERGSLFRIL-------HNDAEAVELDWAK 447
V+ + M RG L L N+ +K
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 448 RVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQT 507
+ + +A +AYL+ + VHRD+++ N + + DFG R ++ +
Sbjct: 127 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRK 183
Query: 508 LLAG--SYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
G +++PE V T DV+SFGVV E+
Sbjct: 184 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNIL---LNSKLEAFVADFGTARLLHADSSNQTLLAGSYG 514
A+ YLH +VHRD+ N+L L+ + ++DFG +++ S T G+ G
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPG 183
Query: 515 YIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y+APE+ ++ D +S GV+ +L G P
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 83/209 (39%), Gaps = 49/209 (23%)
Query: 377 IGTGAYGSVYKAQL------PNGRVFALKKLNS--PETEELAFIRSFRNEAQVLSQMERG 428
+G GA+G VY+ Q+ P+ A+K L E +EL F+ EA ++S++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM----EALIISKLNHQ 94
Query: 429 SLFRILH-----------------------------NDAEAVELDWAKRVNIVKAMAHAL 459
++ R + ++ L +++ + +A
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNQTLLAG--SYG 514
YL + +HRDI++ N LL VA DFG AR ++ S +
Sbjct: 155 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 515 YIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
++ PE + T K D +SFGV+ E+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 40/202 (19%)
Query: 377 IGTGAYGSVYKAQLP-NGRVFALK--KLNSPETE-------------------------- 407
IG+G +G V+KA+ +G+ + +K K N+ + E
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDY 78
Query: 408 --ELAFIRSFRNEAQVLS-QME---RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAY 461
E + S R++ + L QME +G+L + + +LD + + + + + Y
Sbjct: 79 DPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK-RRGEKLDKVLALELFEQITKGVDY 137
Query: 462 LHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELA 521
+H S +++RD+ +NI L + + DFG L D + G+ Y++PE
Sbjct: 138 IH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND-GKRXRSKGTLRYMSPEQI 193
Query: 522 YTMVMTEKYDVYSFGVVTLEVL 543
+ ++ D+Y+ G++ E+L
Sbjct: 194 SSQDYGKEVDLYALGLILAELL 215
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNIL---LNSKLEAFVADFGTARLLHADSSNQTLLAGSYG 514
A+ YLH +VHRD+ N+L L+ + ++DFG +++ S T G+ G
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPG 183
Query: 515 YIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y+APE+ ++ D +S GV+ +L G P
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 81/205 (39%), Gaps = 41/205 (20%)
Query: 377 IGTGAYGSVYKAQL------PNGRVFALKKLNS--PETEELAF------IRSFRNEAQV- 421
+G GA+G VY+ Q+ P+ A+K L E +EL F I F ++ V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 422 --------------LSQMERGSLFRILHN----DAEAVELDWAKRVNIVKAMAHALAYLH 463
L M G L L ++ L +++ + +A YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNQTLLAG--SYGYIAP 518
+ +HRDI++ N LL VA DFG AR ++ S + ++ P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL 543
E + T K D +SFGV+ E+
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIF 239
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 83/209 (39%), Gaps = 49/209 (23%)
Query: 377 IGTGAYGSVYKAQL------PNGRVFALKKLNS--PETEELAFIRSFRNEAQVLSQMERG 428
+G GA+G VY+ Q+ P+ A+K L E +EL F+ EA ++S++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM----EALIISKLNHQ 108
Query: 429 SLFRILH-----------------------------NDAEAVELDWAKRVNIVKAMAHAL 459
++ R + ++ L +++ + +A
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNQTLLAG--SYG 514
YL + +HRDI++ N LL VA DFG AR ++ S +
Sbjct: 169 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 515 YIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
++ PE + T K D +SFGV+ E+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNIL---LNSKLEAFVADFGTARLLHADSSNQTLLAGSYG 514
A+ YLH +VHRD+ N+L L+ + ++DFG +++ S T G+ G
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPG 183
Query: 515 YIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y+APE+ ++ D +S GV+ +L G P
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 69/156 (44%), Gaps = 7/156 (4%)
Query: 200 ELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEI-GNLKNLMLLDVGNNDIIGP 258
+LD+ L T LT L L L NQL L + +L L L + NN +
Sbjct: 39 KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-AS 97
Query: 259 IPSTLGLFSDLSYLD---LSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASME 315
+P LG+F L+ LD L NQ S RLT+L L L++N+L +
Sbjct: 98 LP--LGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLT 155
Query: 316 DLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKL 351
+L L LS N ++ G +L +L + L GN+
Sbjct: 156 NLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 56/138 (40%), Gaps = 8/138 (5%)
Query: 153 ALSKLQLLDLSSNRLR-------GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGD 205
L+KL L+L N+L+ LT L + L+ N L L +L L +L +G
Sbjct: 57 GLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGG 116
Query: 206 NSLIGPIPLTLSRLTSLKILILAQNQLSGLPQ-EIGNLKNLMLLDVGNNDIIGPIPSTLG 264
N L RLT LK L L NQL +P L NL L + N +
Sbjct: 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFD 176
Query: 265 LFSDLSYLDLSCNQFNSS 282
L + L NQF+ S
Sbjct: 177 RLGKLQTITLFGNQFDCS 194
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 259 IPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLT 318
+PS G+ +D LDL + LT+L L+L N+L + +L
Sbjct: 29 VPS--GIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELG 86
Query: 319 WLDLSNNNIKGSIP-GEITKLSRLDYLNLSGNKL 351
L L+NN + S+P G L++LD L L GN+L
Sbjct: 87 TLGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQL 119
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 282 SIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRL 341
S+P+ + T+ LDL S L+ + + LTWL+L N ++ G L+ L
Sbjct: 28 SVPSGIPADTE--KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTEL 85
Query: 342 DYLNLSGNKLS 352
L L+ N+L+
Sbjct: 86 GTLGLANNQLA 96
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 108/262 (41%), Gaps = 52/262 (19%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHN 436
IG+G V++ +++A+K +N E + + S+RNE L+++++ S I
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 437 DAEAVE-----------------------LDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
D E + +D +R + K M A+ +H +VH
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHS 179
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSN--QTLLAGSYGYIAPELAYTMVMTEK-- 529
D+ N L+ + + DFG A + D+++ + G+ Y+ PE M + +
Sbjct: 180 DLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 238
Query: 530 ---------YDVYSFGVVTLEVLMGKHP-RDLHSTLSSSYDPKIMLIDVLDQRLPPPVDR 579
DV+S G + + GK P + + + +S + +ID + P +
Sbjct: 239 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH----AIIDPNHEIEFPDIPE 294
Query: 580 KVIQDILLVSTISFACLQSNPK 601
K +QD+L CL+ +PK
Sbjct: 295 KDLQDVLK------CCLKRDPK 310
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 458 ALAYLHHDCSPSVVHRDISSNNIL---LNSKLEAFVADFGTARLLHADSSNQTLLAGSYG 514
A+ YLH +VHRD+ N+L L+ + ++DFG +++ S T G+ G
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPG 183
Query: 515 YIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y+APE+ ++ D +S GV+ +L G P
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA--DSSNQTLLAGSYGYIAPELAYTM 524
S +HRD+++ NILL+ + DFG AR ++ D + ++APE +
Sbjct: 217 SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDK 276
Query: 525 VMTEKYDVYSFGVVTLEVL-MGKHP 548
+ + K DV+S+GV+ E+ +G P
Sbjct: 277 IYSTKSDVWSYGVLLWEIFSLGGSP 301
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
Query: 377 IGTGAYGSVYK-AQLPNGRVFALKKLNSPETEELAFIR-------------------SFR 416
+GTGA+G V++ + G FA K + +P + +R +F
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 417 NEAQ---VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
++ + + M G LF + ++ + D A V ++ + L ++H + + VH
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA--VEYMRQVCKGLCHMHEN---NYVHL 173
Query: 474 DISSNNILLNSKL--EAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
D+ NI+ +K E + DFG L S + + G+ + APE+A + D
Sbjct: 174 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK-VTTGTAEFAAPEVAEGKPVGYYTD 232
Query: 532 VYSFGVVTLEVLMGKHP 548
++S GV++ +L G P
Sbjct: 233 MWSVGVLSYILLSGLSP 249
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 38/203 (18%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNS-------------PETEELAFIRS-------- 414
IG GA+G V + + R V+A+K L+ E + +AF S
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 136
Query: 415 -FRNEA---QVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSV 470
F+++ V+ M G L ++ N V WA+ + AL +H S
Sbjct: 137 AFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARF--YTAEVVLALDAIH---SMGF 189
Query: 471 VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLA-GSYGYIAPELAYTMVMTEK 529
+HRD+ +N+LL+ +ADFGT ++ + + A G+ YI+PE+ +
Sbjct: 190 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 249
Query: 530 Y----DVYSFGVVTLEVLMGKHP 548
Y D +S GV E+L+G P
Sbjct: 250 YGRECDWWSVGVFLYEMLVGDTP 272
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 81/205 (39%), Gaps = 41/205 (20%)
Query: 377 IGTGAYGSVYKAQL------PNGRVFALKKLNS--PETEELAF------IRSFRNEAQV- 421
+G GA+G VY+ Q+ P+ A+K L E +EL F I F ++ V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 422 --------------LSQMERGSLFRILHN----DAEAVELDWAKRVNIVKAMAHALAYLH 463
L M G L L ++ L +++ + +A YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNQTLLAG--SYGYIAP 518
+ +HRDI++ N LL VA DFG AR ++ S + ++ P
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL 543
E + T K D +SFGV+ E+
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIF 246
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
+ + +A +AYL+ + VHRD+++ N ++ + DFG R + +
Sbjct: 130 IQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 186
Query: 509 LAG--SYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
G ++APE V T D++SFGVV E+
Sbjct: 187 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 108/262 (41%), Gaps = 52/262 (19%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHN 436
IG+G V++ +++A+K +N E + + S+RNE L+++++ S I
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 437 DAEAVE-----------------------LDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
D E + +D +R + K M A+ +H +VH
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHS 179
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSN--QTLLAGSYGYIAPELAYTMVMTEK-- 529
D+ N L+ + + DFG A + D+++ + G+ Y+ PE M + +
Sbjct: 180 DLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENG 238
Query: 530 ---------YDVYSFGVVTLEVLMGKHP-RDLHSTLSSSYDPKIMLIDVLDQRLPPPVDR 579
DV+S G + + GK P + + + +S + +ID + P +
Sbjct: 239 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH----AIIDPNHEIEFPDIPE 294
Query: 580 KVIQDILLVSTISFACLQSNPK 601
K +QD+L CL+ +PK
Sbjct: 295 KDLQDVLK------CCLKRDPK 310
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 38/203 (18%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNS-------------PETEELAFIRS-------- 414
IG GA+G V + + R V+A+K L+ E + +AF S
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 415 -FRNEA---QVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSV 470
F+++ V+ M G L ++ N V WA+ + AL +H S
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARF--YTAEVVLALDAIH---SMGF 194
Query: 471 VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLA-GSYGYIAPELAYTMVMTEK 529
+HRD+ +N+LL+ +ADFGT ++ + + A G+ YI+PE+ +
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 254
Query: 530 Y----DVYSFGVVTLEVLMGKHP 548
Y D +S GV E+L+G P
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 81/205 (39%), Gaps = 41/205 (20%)
Query: 377 IGTGAYGSVYKAQL------PNGRVFALKKLNS--PETEELAF------IRSFRNEAQV- 421
+G GA+G VY+ Q+ P+ A+K L E +EL F I F ++ V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 422 --------------LSQMERGSLFRILHN----DAEAVELDWAKRVNIVKAMAHALAYLH 463
L M G L L ++ L +++ + +A YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNQTLLAG--SYGYIAP 518
+ +HRDI++ N LL VA DFG AR ++ S + ++ P
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL 543
E + T K D +SFGV+ E+
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIF 256
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 9/155 (5%)
Query: 398 LKKLNSPETEELAFIRSFRNEAQ---VLSQMERGSLFRILHNDAEAVELDWAKRV-NIVK 453
LK+LN P + + SF + + VL + G L R++ + + L + V
Sbjct: 86 LKQLNHPNV--IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143
Query: 454 AMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSY 513
+ AL ++H S V+HRDI N+ + + + D G R + ++ L G+
Sbjct: 144 QLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTP 200
Query: 514 GYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y++PE + K D++S G + E+ + P
Sbjct: 201 YYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
+ + +A +AYL+ + VHRD+++ N ++ + DFG R + +
Sbjct: 133 IQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 189
Query: 509 LAG--SYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
G ++APE V T D++SFGVV E+
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 81/205 (39%), Gaps = 41/205 (20%)
Query: 377 IGTGAYGSVYKAQL------PNGRVFALKKLNS--PETEELAF------IRSFRNEAQV- 421
+G GA+G VY+ Q+ P+ A+K L E +EL F I F ++ V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 422 --------------LSQMERGSLFRILHN----DAEAVELDWAKRVNIVKAMAHALAYLH 463
L M G L L ++ L +++ + +A YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNQTLLAG--SYGYIAP 518
+ +HRDI++ N LL VA DFG AR ++ S + ++ P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL 543
E + T K D +SFGV+ E+
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIF 240
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 69/156 (44%), Gaps = 7/156 (4%)
Query: 200 ELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEI-GNLKNLMLLDVGNNDIIGP 258
+LD+ L T LT L L L NQL L + +L L L + NN +
Sbjct: 39 KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-AS 97
Query: 259 IPSTLGLFSDLSYLD---LSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASME 315
+P LG+F L+ LD L NQ S RLT+L L L++N+L +
Sbjct: 98 LP--LGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLT 155
Query: 316 DLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKL 351
+L L LS N ++ G +L +L + L GN+
Sbjct: 156 NLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 56/138 (40%), Gaps = 8/138 (5%)
Query: 153 ALSKLQLLDLSSNRLR-------GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGD 205
L+KL L+L N+L+ LT L + L+ N L L +L L +L +G
Sbjct: 57 GLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGG 116
Query: 206 NSLIGPIPLTLSRLTSLKILILAQNQLSGLPQ-EIGNLKNLMLLDVGNNDIIGPIPSTLG 264
N L RLT LK L L NQL +P L NL L + N +
Sbjct: 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFD 176
Query: 265 LFSDLSYLDLSCNQFNSS 282
L + L NQF+ S
Sbjct: 177 RLGKLQTITLFGNQFDCS 194
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 259 IPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLT 318
+PS G+ +D LDL + LT+L L+L N+L + +L
Sbjct: 29 VPS--GIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELG 86
Query: 319 WLDLSNNNIKGSIP-GEITKLSRLDYLNLSGNKL 351
L L+NN + S+P G L++LD L L GN+L
Sbjct: 87 TLGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQL 119
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
+ + +A +AYL+ + VHRD+++ N ++ + DFG R ++ +
Sbjct: 132 IQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 188
Query: 509 LAG--SYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
G ++APE V T D++SFGVV E+
Sbjct: 189 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
+ + +A +AYL+ + VHRD+++ N ++ + DFG R ++ +
Sbjct: 133 IQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 189
Query: 509 LAG--SYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
G ++APE V T D++SFGVV E+
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 111/252 (44%), Gaps = 41/252 (16%)
Query: 124 NFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRGRL------TNLNYM 177
+ S NL +LR L Y + S S ++ L+K L+L +N L T LNY+
Sbjct: 102 DISALQNLTNLREL-YLNEDNISDISPLANLTKXYSLNLGANHNLSDLSPLSNXTGLNYL 160
Query: 178 SLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQ 237
+++ + + + P I NL +L L + N + PL + LTSL NQ++ +
Sbjct: 161 TVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISPL--ASLTSLHYFTAYVNQITDIT- 215
Query: 238 EIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNS---------------- 281
+ N L L +GNN I P L S L++L++ NQ +
Sbjct: 216 PVANXTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDINAVKDLTKLKXLNVG 273
Query: 282 -------SIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIP-G 333
S+ N L++L LF L++N+L + I + +LT L LS N+I P
Sbjct: 274 SNQISDISVLNNLSQLNSLF---LNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRPLA 330
Query: 334 EITKLSRLDYLN 345
++K D+ N
Sbjct: 331 SLSKXDSADFAN 342
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 150 EISALSKLQLLDLSSNRLRG--RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNS 207
E+ +++KL + ++G LTNL Y++L+ N + + P + NL L L +G N
Sbjct: 42 ELESITKLVVAGEKVASIQGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNK 99
Query: 208 LIGPIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFS 267
I I L LT+L+ L L ++ +S + + NL L++G N + + S L +
Sbjct: 100 -ITDIS-ALQNLTNLRELYLNEDNISDI-SPLANLTKXYSLNLGANHNLSDL-SPLSNXT 155
Query: 268 DLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNI 327
L+YL ++ ++ P + LT L+ L L+ N++ P +AS+ L + N I
Sbjct: 156 GLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQI 211
Query: 328 KGSIPGEITKLSRLDYLNLSGNKLSGRVPYSN 359
P + +RL+ L + NK++ P +N
Sbjct: 212 TDITP--VANXTRLNSLKIGNNKITDLSPLAN 241
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 38/203 (18%)
Query: 377 IGTGAYGSVYKAQLPNGR-VFALKKLNS-------------PETEELAFIRS-------- 414
IG GA+G V + + R V+A+K L+ E + +AF S
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 415 -FRNEA---QVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSV 470
F+++ V+ M G L ++ N V WA+ + AL +H S
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARF--YTAEVVLALDAIH---SMGF 194
Query: 471 VHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLA-GSYGYIAPELAYTMVMTEK 529
+HRD+ +N+LL+ +ADFGT ++ + + A G+ YI+PE+ +
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 254
Query: 530 Y----DVYSFGVVTLEVLMGKHP 548
Y D +S GV E+L+G P
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGT--ARLLHADSSNQTLLAGSYG-------YIA 517
+ HRD+ NILL + + + D G+ +H + S Q L + Y A
Sbjct: 152 AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 518 PELAYTM---VMTEKYDVYSFGVVTLEVLMGKHPRDL 551
PEL V+ E+ DV+S G V ++ G+ P D+
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 451 IVKAMAHALAYLHHDCSPSVVHRDISSNNILL---NSKLEAF-VADFGTARLLHADSSNQ 506
++ + + YLH S VVHRD+ +NIL + E + DFG A+ L A+ N
Sbjct: 126 VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE--NG 180
Query: 507 TLLAGSY--GYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
L+ Y ++APE+ E D++S G++ +L G P
Sbjct: 181 LLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
+ + +A +AYL+ + VHRD+++ N ++ + DFG R + +
Sbjct: 133 IQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 189
Query: 509 LAG--SYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
G ++APE V T D++SFGVV E+
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH-ADSSNQTLLAGSY 513
+ A+AYL S + VHRDI+ NIL+ S + DFG +R + D ++
Sbjct: 134 ICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 190
Query: 514 GYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
+++PE T DV+ F V E+L GK P
Sbjct: 191 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH-ADSSNQTLLAGSY 513
+ A+AYL S + VHRDI+ NIL+ S + DFG +R + D ++
Sbjct: 118 ICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 174
Query: 514 GYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
+++PE T DV+ F V E+L GK P
Sbjct: 175 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 31/197 (15%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
IGTG++G V + + G +A+K L+ + +L I NE ++L +
Sbjct: 48 TIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHDCSPSVV 471
+ +L+ ++ +R+ + HA YLH S ++
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ N+L++ + VADFG A+ + + L G+ Y+APE+ + + D
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 532 VYSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 221 WWALGVLIYEMAAGYPP 237
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 370 KIDSKYCIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--- 425
+ D +GTG++G V + +G +A+K L+ + +L I NE ++L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 426 ----------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHD 465
+ +L+ ++ A +R+ + HA YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH-- 158
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
S +++RD+ N+L++ + V DFG A+ + + LAG+ Y+APE+ +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLAGTPEYLAPEIILSKG 214
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 49/209 (23%)
Query: 377 IGTGAYGSVYKAQL------PNGRVFALKKLNS--PETEELAFIRSFRNEAQVLSQMERG 428
+G GA+G VY+ Q+ P+ A+K L E +EL F+ EA ++S+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM----EALIISKFNHQ 93
Query: 429 SLFRILH-----------------------------NDAEAVELDWAKRVNIVKAMAHAL 459
++ R + ++ L +++ + +A
Sbjct: 94 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNQTLLAG--SYG 514
YL + +HRDI++ N LL VA DFG AR ++ S +
Sbjct: 154 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 515 YIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
++ PE + T K D +SFGV+ E+
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 451 IVKAMAHALAYLHHDCSPSVVHRDISSNNILL---NSKLEAF-VADFGTARLLHADSSNQ 506
++ + + YLH S VVHRD+ +NIL + E + DFG A+ L A+ N
Sbjct: 126 VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE--NG 180
Query: 507 TLLAGSY--GYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
L+ Y ++APE+ E D++S G++ +L G P
Sbjct: 181 LLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 452 VKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNQTLLA 510
+ + A+ ++H S + HRDI N+L+NSK + DFG+A+ L + +
Sbjct: 147 IYQLFRAVGFIH---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXIC 203
Query: 511 GSYGYIAPELAYTMV-MTEKYDVYSFGVVTLEVLMGK 546
+ Y APEL T D++S G V E+++GK
Sbjct: 204 SRF-YRAPELMLGATEYTPSIDLWSIGCVFGELILGK 239
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 81/205 (39%), Gaps = 41/205 (20%)
Query: 377 IGTGAYGSVYKAQL------PNGRVFALKKLNS--PETEELAF------IRSFRNEAQV- 421
+G GA+G VY+ Q+ P+ A+K L E +EL F I F ++ V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 422 --------------LSQMERGSLFRILHN----DAEAVELDWAKRVNIVKAMAHALAYLH 463
L M G L L ++ L +++ + +A YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNQTLLAG--SYGYIAP 518
+ +HRDI++ N LL VA DFG AR ++ S + ++ P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL 543
E + T K D +SFGV+ E+
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIF 254
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 49/209 (23%)
Query: 377 IGTGAYGSVYKAQL------PNGRVFALKKLNS--PETEELAFIRSFRNEAQVLSQMERG 428
+G GA+G VY+ Q+ P+ A+K L E +EL F+ EA ++S+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM----EALIISKFNHQ 108
Query: 429 SLFRILH-----------------------------NDAEAVELDWAKRVNIVKAMAHAL 459
++ R + ++ L +++ + +A
Sbjct: 109 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 460 AYLHHDCSPSVVHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNQTLLAG--SYG 514
YL + +HRDI++ N LL VA DFG AR ++ S +
Sbjct: 169 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 515 YIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
++ PE + T K D +SFGV+ E+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH-ADSSNQTLLAGSY 513
+ A+AYL S + VHRDI+ NIL+ S + DFG +R + D ++
Sbjct: 122 ICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 178
Query: 514 GYIAPELAYTMVMTEKYDVYSFGVVTLEVL-MGKHP 548
+++PE T DV+ F V E+L GK P
Sbjct: 179 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 31/197 (15%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
IGTG++G V + + G +A+K L+ + +L I NE ++L +
Sbjct: 48 TIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHDCSPSVV 471
+ +L+ ++ +R+ + HA YLH S ++
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ N+L++ + VADFG A+ + + L G+ Y+APE+ + + D
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 532 VYSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 221 WWALGVLIYEMAAGYPP 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 31/197 (15%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
IGTG++G V + + G +A+K L+ + +L I NE ++L +
Sbjct: 48 TIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHDCSPSVV 471
+ +L+ ++ +R+ + HA YLH S ++
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ N+L++ + VADFG A+ + + L G+ Y+APE+ + + D
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 532 VYSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 221 WWALGVLIYEMAAGYPP 237
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 22/161 (13%)
Query: 407 EELAFIRSFRNE-----AQVLSQMERGSLFRILH----NDAEAVELDWAKRVNIVKAMAH 457
+E+ +R R++ VL E+ ++ ++ E ++ KR + +A +
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGY 114
Query: 458 ------ALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLA- 510
L YLH S +VH+DI N+LL + ++ G A LH +++ T
Sbjct: 115 FCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS 171
Query: 511 -GSYGYIAPELAYTMVMTE--KYDVYSFGVVTLEVLMGKHP 548
GS + PE+A + K D++S GV + G +P
Sbjct: 172 QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 87/203 (42%), Gaps = 31/203 (15%)
Query: 370 KIDSKYCIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--- 425
+ D +GTG++G V + +G +A+K L+ + +L I NE ++L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 426 ----------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHD 465
+ +L+ ++ A +R+ A HA YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-AEPHARFYAAQIVLTFEYLH-- 158
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
S +++RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKG 214
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 81/205 (39%), Gaps = 41/205 (20%)
Query: 377 IGTGAYGSVYKAQL------PNGRVFALKKLNS--PETEELAF------IRSFRNEAQV- 421
+G GA+G VY+ Q+ P+ A+K L E +EL F I F ++ V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 422 --------------LSQMERGSLFRILHN----DAEAVELDWAKRVNIVKAMAHALAYLH 463
L M G L L ++ L +++ + +A YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNQTLLAG--SYGYIAP 518
+ +HRDI++ N LL VA DFG AR ++ S + ++ P
Sbjct: 185 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL 543
E + T K D +SFGV+ E+
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIF 266
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 453 KAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS 512
+ + A+ Y H +VHRD+ + N+LL++ + +ADFG + G+
Sbjct: 121 RQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDAFCGA 176
Query: 513 YGYIAPELAYTMVMTEKY-----DVYSFGVVTLEVLMGKHPRD 550
Y APEL +KY DV+S GV+ ++ G P D
Sbjct: 177 PPYAAPEL----FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 55/127 (43%), Gaps = 24/127 (18%)
Query: 225 LILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIP 284
L L NQ + +P+E+ N K+L L+D+ NN I STL N S
Sbjct: 36 LYLDGNQFTLVPKELSNYKHLTLIDLSNNRI-----STLS---------------NQSFS 75
Query: 285 NELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYL 344
N +TQL L LS N+L P ++ L L L N+I G LS L +L
Sbjct: 76 N----MTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHL 131
Query: 345 NLSGNKL 351
+ N L
Sbjct: 132 AIGANPL 138
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 187 LLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGL-PQEIGNLKNL 245
L+P+E+ N K+L +D+ +N + + S +T L LIL+ N+L + P+ LK+L
Sbjct: 45 LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSL 104
Query: 246 MLLDVGNNDIIGPIPSTLGLFSDLSYL 272
LL + ND I +P G F+DLS L
Sbjct: 105 RLLSLHGND-ISVVPE--GAFNDLSAL 128
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 264 GLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLS 323
G+ D++ L L NQF + +P EL+ L +DLS+N++S ++M L L LS
Sbjct: 28 GIPRDVTELYLDGNQF-TLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILS 86
Query: 324 NNNIKGSIPGEITKLSRLDYLNLSGNKLS 352
N ++ P L L L+L GN +S
Sbjct: 87 YNRLRCIPPRTFDGLKSLRLLSLHGNDIS 115
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 21/120 (17%)
Query: 139 YYDG--FTGSIPSEISALSKLQLLDLSSNRLRGRLTNLNYMSLSRNMLGGLLPQEIGNLK 196
Y DG FT +P E+S L L+DLS+NR+ L+N Q N+
Sbjct: 37 YLDGNQFT-LVPKELSNYKHLTLIDLSNNRI-STLSN----------------QSFSNMT 78
Query: 197 NLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQ-EIGNLKNLMLLDVGNNDI 255
L+ L + N L P T L SL++L L N +S +P+ +L L L +G N +
Sbjct: 79 QLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 471 VHRDISSNNILLNSKLEAFVADFGTARLLHA-DSSNQTLLAG-SYGYIAPELAYTMVMTE 528
+HRD+++ N +L + VADFG ++ +++ D Q +A +IA E V T
Sbjct: 169 LHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTS 228
Query: 529 KYDVYSFGVVTLEV 542
K DV++FGV E+
Sbjct: 229 KSDVWAFGVTMWEI 242
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 31/169 (18%)
Query: 362 LSSMPTPRKIDSKYCIGTGAYGSVYKAQLPNG-RVFALKKLNSPETEELAFIRSFRNEAQ 420
+ ++ P + K+ IG G+YG VY A N + A+KK+N E+L + E
Sbjct: 21 IKNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNR-MFEDLIDCKRILREIT 79
Query: 421 VLSQMERGSLFRI--------------LHNDAEAVELDWAKRVNI--------VKAMAHA 458
+L++++ + R+ L+ E + D K VK + +
Sbjct: 80 ILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYN 139
Query: 459 L----AYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS 503
L ++H ++HRD+ N LLN + DFG AR +++D
Sbjct: 140 LLLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDK 185
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 106/263 (40%), Gaps = 69/263 (26%)
Query: 346 LSGNKLSG---RVPYSNKHLSSMPTPR-------KIDSKYCIGTGAYGSVYKAQLP-NGR 394
+SG++ G + +S+K +SMP P + + ++ IGTG+YG V +A R
Sbjct: 20 VSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKR 79
Query: 395 VFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILH----NDAEA---------- 440
V A+KK+ E+L + E +L+++ + ++L D E
Sbjct: 80 VVAIKKILRV-FEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEI 138
Query: 441 VELDWAK--RVNIVKAMAH----------ALAYLHHDCSPSVVHRDISSNNILLNSKLEA 488
+ D+ K R + H + Y+H S ++HRD+ N L+N
Sbjct: 139 ADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSV 195
Query: 489 FVADFGTARLL-HADSSNQTL-----------------------LAG---SYGYIAPELA 521
V DFG AR + + ++ N L L G + Y APEL
Sbjct: 196 KVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELI 255
Query: 522 YTMV-MTEKYDVYSFGVVTLEVL 543
TE DV+S G + E+L
Sbjct: 256 LLQENYTEAIDVWSIGCIFAELL 278
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 82/213 (38%), Gaps = 57/213 (26%)
Query: 377 IGTGAYGSVYKAQL------PNGRVFALKKLNS--PETEELAF------IRSFRNEAQV- 421
+G GA+G VY+ Q+ P+ A+K L E +EL F I F ++ V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 422 --------------LSQMERGSLFRILHN----DAEAVELDWAKRVNIVKAMAHALAYLH 463
L M G L L ++ L +++ + +A YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNQTLLAGSY------- 513
+ +HRDI++ N LL VA DFG AR ++ AG Y
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR--------AGYYRKGGCAM 247
Query: 514 ---GYIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
++ PE + T K D +SFGV+ E+
Sbjct: 248 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 280
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 82/213 (38%), Gaps = 57/213 (26%)
Query: 377 IGTGAYGSVYKAQL------PNGRVFALKKLNS--PETEELAF------IRSFRNEAQV- 421
+G GA+G VY+ Q+ P+ A+K L E +EL F I F ++ V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 422 --------------LSQMERGSLFRILHN----DAEAVELDWAKRVNIVKAMAHALAYLH 463
L M G L L ++ L +++ + +A YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNQTLLAGSY------- 513
+ +HRDI++ N LL VA DFG AR ++ AG Y
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR--------AGYYRKGGCAM 224
Query: 514 ---GYIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
++ PE + T K D +SFGV+ E+
Sbjct: 225 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 257
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 105/263 (39%), Gaps = 52/263 (19%)
Query: 377 IGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHN 436
IG+G V++ +++A+K +N E + + S+RNE L+++++ S I
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 437 DAEAVE-----------------------LDWAKRVNIVKAMAHALAYLHHDCSPSVVHR 473
D E + +D +R + K M A+ +H +VH
Sbjct: 95 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHS 151
Query: 474 DISSNNILLNSKLEAFVADFGTARLLHADSSN--QTLLAGSYGYIAPELAYTMVMTEK-- 529
D+ N L+ + + DFG A + D + G+ Y+ PE M + +
Sbjct: 152 DLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENG 210
Query: 530 ---------YDVYSFGVVTLEVLMGKHP-RDLHSTLSSSYDPKIMLIDVLDQRLPPPVDR 579
DV+S G + + GK P + + + +S + +ID + P +
Sbjct: 211 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH----AIIDPNHEIEFPDIPE 266
Query: 580 KVIQDILLVSTISFACLQSNPKS 602
K +QD+L CL+ +PK
Sbjct: 267 KDLQDVLK------CCLKRDPKQ 283
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 31/197 (15%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
+GTG++G V + + G +A+K L+ + +L I NE ++L +
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHDCSPSVV 471
+ +L+ ++ A +R+ + HA YLH S ++
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ + + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 532 VYSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 221 WWALGVLIYEMAAGYPP 237
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 61/243 (25%)
Query: 353 GRVPYSNKHLSSM-PTPRK--IDSKYCIG----TGAYGSVYKA----------------- 388
G P ++ H + + P K ++S+Y +G +G +GSVY
Sbjct: 1 GAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 60
Query: 389 ------QLPNG-----RVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND 437
+LPNG V LKK++S F ++L ER F ++
Sbjct: 61 RISDWGELPNGTRVPMEVVLLKKVSS----------GFSGVIRLLDWFERPDSFVLILER 110
Query: 438 AEAVE--LDW-AKRVNIVKAMAHAL------AYLH-HDCSPSVVHRDISSNNILLN-SKL 486
E V+ D+ +R + + +A + A H H+C V+HRDI NIL++ ++
Sbjct: 111 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRG 168
Query: 487 EAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYDVYSFGVVTLEVLMG 545
E + DFG+ LL + T G+ Y PE + Y V+S G++ +++ G
Sbjct: 169 ELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
Query: 546 KHP 548
P
Sbjct: 227 DIP 229
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 91/227 (40%), Gaps = 38/227 (16%)
Query: 119 RLSHLNFSCFP--NLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRGR------ 170
L + F FP L+SL+ L + G+ SE+ L L+ LDLS N L +
Sbjct: 310 ELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVD-LPSLEFLDLSRNGLSFKGCCSQS 368
Query: 171 ---LTNLNYMSLSRNMLGGLLPQEIG------------------------NLKNLIELDV 203
T+L Y+ LS N + + +G +L+NLI LD+
Sbjct: 369 DFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 428
Query: 204 GDNSLIGPIPLTLSRLTSLKILILAQN--QLSGLPQEIGNLKNLMLLDVGNNDIIGPIPS 261
+ L+SL++L +A N Q + LP L+NL LD+ + P+
Sbjct: 429 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 488
Query: 262 TLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIP 308
S L L+++ NQ S RLT L + L +N P
Sbjct: 489 AFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 57/143 (39%), Gaps = 38/143 (26%)
Query: 115 NFNG--RLSHLNF--------SCFPNLESLRILAYYD--------GFTGSIPSEISALSK 156
NF G +L HL+F S F SLR L Y D F G + LS
Sbjct: 391 NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIF----NGLSS 446
Query: 157 LQLLDLSSNRLRGRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTL 216
L++L ++ N + LP L+NL LD+ L P
Sbjct: 447 LEVLKMAGNSFQE----------------NFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 490
Query: 217 SRLTSLKILILAQNQLSGLPQEI 239
+ L+SL++L +A NQL +P I
Sbjct: 491 NSLSSLQVLNMASNQLKSVPDGI 513
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 62/152 (40%), Gaps = 31/152 (20%)
Query: 160 LDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPI 212
LDLS N LR L + LSR + + +L +L L + N +
Sbjct: 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 92
Query: 213 PLTLSRLTSLKILILAQNQLSGLPQ-EIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSY 271
S L+SL+ L+ + L+ L IG+LK L L+V +N I
Sbjct: 93 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ--------------- 137
Query: 272 LDLSCNQFNSSIPNELTRLTQLFHLDLSSNKL 303
+ +P + LT L HLDLSSNK+
Sbjct: 138 --------SFKLPEYFSNLTNLEHLDLSSNKI 161
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 462 LHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLA--GSYGYIAPE 519
L H + VV+RD+ NILL+ ++D G A D S + A G++GY+APE
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPE 360
Query: 520 -LAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHST 554
L + D +S G + ++L G P H T
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 462 LHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLA--GSYGYIAPE 519
L H + VV+RD+ NILL+ ++D G A D S + A G++GY+APE
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPE 360
Query: 520 -LAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHST 554
L + D +S G + ++L G P H T
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 61/243 (25%)
Query: 353 GRVPYSNKHLSSM-PTPRK--IDSKYCIG----TGAYGSVYKA----------------- 388
G P ++ H + + P K ++S+Y +G +G +GSVY
Sbjct: 1 GAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 60
Query: 389 ------QLPNG-----RVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND 437
+LPNG V LKK++S F ++L ER F ++
Sbjct: 61 RISDWGELPNGTRVPMEVVLLKKVSS----------GFSGVIRLLDWFERPDSFVLILER 110
Query: 438 AEAVE--LDW-AKRVNIVKAMAHAL------AYLH-HDCSPSVVHRDISSNNILLN-SKL 486
E V+ D+ +R + + +A + A H H+C V+HRDI NIL++ ++
Sbjct: 111 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRG 168
Query: 487 EAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYDVYSFGVVTLEVLMG 545
E + DFG+ LL + T G+ Y PE + Y V+S G++ +++ G
Sbjct: 169 ELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
Query: 546 KHP 548
P
Sbjct: 227 DIP 229
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 462 LHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLA--GSYGYIAPE 519
L H + VV+RD+ NILL+ ++D G A D S + A G++GY+APE
Sbjct: 304 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPE 359
Query: 520 -LAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHST 554
L + D +S G + ++L G P H T
Sbjct: 360 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 395
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 462 LHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLA--GSYGYIAPE 519
L H + VV+RD+ NILL+ ++D G A D S + A G++GY+APE
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPE 360
Query: 520 -LAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHST 554
L + D +S G + ++L G P H T
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 61/243 (25%)
Query: 353 GRVPYSNKHLSSM-PTPRK--IDSKYCIG----TGAYGSVYKA----------------- 388
G P ++ H + + P K ++S+Y +G +G +GSVY
Sbjct: 1 GAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 60
Query: 389 ------QLPNG-----RVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND 437
+LPNG V LKK++S F ++L ER F ++
Sbjct: 61 RISDWGELPNGTRVPMEVVLLKKVSS----------GFSGVIRLLDWFERPDSFVLILER 110
Query: 438 AEAVE--LDW-AKRVNIVKAMAHAL------AYLH-HDCSPSVVHRDISSNNILLN-SKL 486
E V+ D+ +R + + +A + A H H+C V+HRDI NIL++ ++
Sbjct: 111 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRG 168
Query: 487 EAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LAYTMVMTEKYDVYSFGVVTLEVLMG 545
E + DFG+ LL + T G+ Y PE + Y V+S G++ +++ G
Sbjct: 169 ELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
Query: 546 KHP 548
P
Sbjct: 227 DIP 229
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 453 KAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFG-TARLLHADSSNQTLLAG 511
+ + A+ Y H +VHRD+ + N+LL++ + +ADFG + + ++ G
Sbjct: 120 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDE--FCG 174
Query: 512 SYGYIAPELAYTMVMTEKY-----DVYSFGVVTLEVLMGKHPRD 550
S Y APEL +KY DV+S GV+ ++ G P D
Sbjct: 175 SPPYAAPEL----FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 31/203 (15%)
Query: 370 KIDSKYCIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--- 425
+ D +GTG++G V + +G +A+K L+ + +L I NE ++L +
Sbjct: 29 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 88
Query: 426 ----------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHD 465
+ +L+ ++ A +R+ + HA YLH
Sbjct: 89 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH-- 145
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
S +++RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ +
Sbjct: 146 -SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKG 201
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
+ D ++ GV+ E+ G P
Sbjct: 202 YNKAVDWWALGVLIYEMAAGYPP 224
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 82/194 (42%), Gaps = 29/194 (14%)
Query: 377 IGTGAYGSVYKAQLPN-GRVFALKKLNSPETEEL--AFIRSFRNEAQVLSQMERGSL--- 430
+G G + +VYKA+ N ++ A+KK+ E R+ E ++L ++ ++
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 431 -------------FRILHNDAEAVELDWAKRVNIVKAMAH------ALAYLHHDCSPSVV 471
F + D E + D + + A+ L YLH ++
Sbjct: 78 LDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---IL 134
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTE-KY 530
HRD+ NN+LL+ +ADFG A+ + + + Y APEL + M
Sbjct: 135 HRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGV 194
Query: 531 DVYSFGVVTLEVLM 544
D+++ G + E+L+
Sbjct: 195 DMWAVGCILAELLL 208
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
+++++ R L +++H+ + +I M H L LH VVHRD+ NI
Sbjct: 111 LVTELMRTDLAQVIHDQRIVISPQ-----HIQYFMYHILLGLHVLHEAGVVHRDLHPGNI 165
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV-MTEKYDVYSFGVVT 539
LL + + DF AR AD +N+T Y APEL T+ D++S G V
Sbjct: 166 LLADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVM 224
Query: 540 LEVLMGK 546
E+ K
Sbjct: 225 AEMFNRK 231
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 421 VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480
+++++ R L +++H+ + +I M H L LH VVHRD+ NI
Sbjct: 111 LVTELMRTDLAQVIHDQRIVISPQ-----HIQYFMYHILLGLHVLHEAGVVHRDLHPGNI 165
Query: 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV-MTEKYDVYSFGVVT 539
LL + + DF AR AD +N+T Y APEL T+ D++S G V
Sbjct: 166 LLADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVM 224
Query: 540 LEVLMGK 546
E+ K
Sbjct: 225 AEMFNRK 231
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 131/295 (44%), Gaps = 22/295 (7%)
Query: 87 DSDHCEWIGITCNSAGSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGS 146
D H + I + +I L+L+ + + RL NF+ + L L A ++ +
Sbjct: 10 DCSHLKLTHIPDDLPSNITVLNLTHNQLR---RLPPTNFTRYSQLAILD--AGFNSISKL 64
Query: 147 IPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLKNLI 199
P L L++L+L N L TNL + L N + + N KNLI
Sbjct: 65 EPELCQILPLLKVLNLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLI 124
Query: 200 ELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQE----IGNLKNLMLLDVGNNDI 255
+LD+ N L T +L +L+ L+LA+N++ L E +GN +L LD+ +N +
Sbjct: 125 KLDLSHNGLSSTKLGTGVQLENLQELLLAKNKILALRSEELEFLGN-SSLRKLDLSSNPL 183
Query: 256 IGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELT---RLTQLFHLDLSSNKLSGKIPSQIA 312
P L L L+ Q N + +L T + +L L++N+L S +
Sbjct: 184 KEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFS 243
Query: 313 SME--DLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYSNKHLSSM 365
++ +LT LDLS NN+ G + L L YL+L N + P S LS++
Sbjct: 244 GLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNL 298
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 99/240 (41%), Gaps = 46/240 (19%)
Query: 121 SHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRGRLTNLNYMSLS 180
SH N F + + L+ L Y + +IPS SN G L +L Y+SLS
Sbjct: 316 SHPNIDDF-SFQWLKYLEYLNMDDNNIPST------------KSNTFTG-LVSLKYLSLS 361
Query: 181 RNM--LGGLLPQEIGNLKN--LIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQ----L 232
+ L L + +L + L+ L++ N + T S L L+IL L N+ L
Sbjct: 362 KTFTSLQTLTNETFVSLAHSPLLTLNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKL 421
Query: 233 SGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQ 292
SG QE L+N+ + + N + S+ L L L L R
Sbjct: 422 SG--QEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLML--------------RRVA 465
Query: 293 LFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLS 352
L ++D+S PS + +LT LDLSNNNI + L L+ L+ N L+
Sbjct: 466 LKNVDIS--------PSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEILDFQHNNLA 517
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 28/169 (16%)
Query: 151 ISALSKLQLLDLSSNRLRGRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIG 210
S L +L++LDL N + +L+ QE L+N+ E+ + N +
Sbjct: 401 FSWLGQLRILDLGLNEIEQKLSG----------------QEWRGLRNIFEIYLSYNKYLQ 444
Query: 211 PIPLTLSRLTSLKILILAQNQLSGL---PQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFS 267
+ + + SL+ L+L + L + P L+NL +LD+ NN+I L
Sbjct: 445 LSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIANINEDLLEGLE 504
Query: 268 DLSYLDLSCNQF-------NSSIP-NELTRLTQLFHLDLSSNKLSGKIP 308
+L LD N N P N L L+ L L+L SN L +IP
Sbjct: 505 NLEILDFQHNNLARLWKRANPGGPVNFLKGLSHLHILNLESNGLD-EIP 552
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 94/228 (41%), Gaps = 58/228 (25%)
Query: 365 MPTPRKIDSKYCIG----TGAYGSVYKA-----------------------QLPNG---- 393
M ++S+Y +G +G +GSVY +LPNG
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 394 -RVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVE--LDW-AKRV 449
V LKK++S F ++L ER F ++ E V+ D+ +R
Sbjct: 61 MEVVLLKKVSS----------GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG 110
Query: 450 NIVKAMAHAL------AYLH-HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHA 501
+ + +A + A H H+C V+HRDI NIL++ ++ E + DFG+ LL
Sbjct: 111 ALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL-- 166
Query: 502 DSSNQTLLAGSYGYIAPE-LAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
+ T G+ Y PE + Y V+S G++ +++ G P
Sbjct: 167 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 115/262 (43%), Gaps = 45/262 (17%)
Query: 117 NGRLSHLNFSCFPNLESLRILAY-YDGFTGSIPSEISALSKLQLLDLSSNRLRGRLTNLN 175
+G + LN F L+ L++L Y+ L LQ+L+LS N L G L + N
Sbjct: 275 HGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLL-GELYSSN 333
Query: 176 --------YMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILIL 227
Y+ L +N + + Q L+ L LD+ DN+L T+ + S+ + L
Sbjct: 334 FYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALT-----TIHFIPSIPDIFL 388
Query: 228 AQNQLSGLPQ--EIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNS---- 281
+ N+L LP+ NL +L + N DI+ + L L L+ N+F+S
Sbjct: 389 SGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRV----PHLQILILNQNRFSSCSGD 444
Query: 282 SIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTW-----------LDLSNNNIKGS 330
P+E L QLF L N L Q+A +L W L L++N +
Sbjct: 445 QTPSENPSLEQLF---LGENML------QLAWETELCWDVFEGLSHLQVLYLNHNYLNSL 495
Query: 331 IPGEITKLSRLDYLNLSGNKLS 352
PG + L+ L L+L+ N+L+
Sbjct: 496 PPGVFSHLTALRGLSLNSNRLT 517
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 19/137 (13%)
Query: 157 LQLLDLSSNRLR---GRLT-----NLNYMSLSRNMLGGLLPQEIG-----NLKNLIELDV 203
LQ+L L+ NR G T +L + L NML E+ L +L L +
Sbjct: 428 LQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYL 487
Query: 204 GDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEIGNL-KNLMLLDVGNNDIIGPIPST 262
N L P S LT+L+ L L N+L+ L +L NL +LD+ N ++ P P
Sbjct: 488 NHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSH--NDLPANLEILDISRNQLLAPNPD- 544
Query: 263 LGLFSDLSYLDLSCNQF 279
+F LS LD++ N+F
Sbjct: 545 --VFVSLSVLDITHNKF 559
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 5/124 (4%)
Query: 229 QNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELT 288
QN +GL + ++ LD+ + + DL L+L+ N+ N
Sbjct: 257 QNTFAGLARS-----SVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFY 311
Query: 289 RLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSG 348
L L L+LS N L S + + ++DL N+I L +L L+L
Sbjct: 312 GLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRD 371
Query: 349 NKLS 352
N L+
Sbjct: 372 NALT 375
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL---LAGSYGYIAPELAYT 523
S VHRD+++ N+L+ S+ + + DFG + + D T+ + APE
Sbjct: 132 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 191
Query: 524 MVMTEKYDVYSFGVVTLEVL 543
DV+SFGV E+L
Sbjct: 192 SKFYIASDVWSFGVTLHELL 211
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
Query: 415 FRNEAQVLSQME---RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
F N+ V+ +E G LF L AE L + +K + + YLH S +
Sbjct: 84 FENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYLH---SKRIA 137
Query: 472 HRDISSNNILL------NSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
H D+ NI+L N +++ + DFG A + A + + + G+ ++APE+
Sbjct: 138 HFDLKPENIMLLDKNVPNPRIK--LIDFGIAHKIEAGNEFKNIF-GTPEFVAPEIVNYEP 194
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
+ + D++S GV+T +L G P
Sbjct: 195 LGLEADMWSIGVITYILLSGASP 217
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG---YIAPELAYT 523
S VHRD+++ N+L+ S+ + + DFG + + D T+ + APE
Sbjct: 144 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 203
Query: 524 MVMTEKYDVYSFGVVTLEVL 543
DV+SFGV E+L
Sbjct: 204 SKFYIASDVWSFGVTLHELL 223
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 94/228 (41%), Gaps = 58/228 (25%)
Query: 365 MPTPRKIDSKYCIG----TGAYGSVYKA-----------------------QLPNG---- 393
M ++S+Y +G +G +GSVY +LPNG
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 394 -RVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVE--LDW-AKRV 449
V LKK++S F ++L ER F ++ E V+ D+ +R
Sbjct: 61 MEVVLLKKVSS----------GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG 110
Query: 450 NIVKAMAHAL------AYLH-HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHA 501
+ + +A + A H H+C V+HRDI NIL++ ++ E + DFG+ LL
Sbjct: 111 ALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL-- 166
Query: 502 DSSNQTLLAGSYGYIAPE-LAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
+ T G+ Y PE + Y V+S G++ +++ G P
Sbjct: 167 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 31/203 (15%)
Query: 370 KIDSKYCIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--- 425
+ D +GTG++G V + +G +A+K L+ + +L I NE ++L +
Sbjct: 43 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 426 ----------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHD 465
+ +L+ ++ A +R+ + HA YLH
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH-- 159
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
S +++RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ +
Sbjct: 160 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKG 215
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
+ D ++ GV+ E+ G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 31/203 (15%)
Query: 370 KIDSKYCIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--- 425
+ D +GTG++G V + +G +A+K L+ + +L I NE ++L +
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 426 ----------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHD 465
+ +L+ ++ A +R+ + HA YLH
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH-- 179
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
S +++RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ +
Sbjct: 180 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT---LCGTPEYLAPEIILSKG 235
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
+ D ++ GV+ E+ G P
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 31/203 (15%)
Query: 370 KIDSKYCIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--- 425
+ D +GTG++G V + +G +A+K L+ + +L I NE ++L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 426 ----------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHD 465
+ +L+ ++ A +R+ + HA YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH-- 158
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
S +++RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKG 214
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
Query: 415 FRNEAQVLSQME---RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
F N+ V+ +E G LF L AE L + +K + + YLH S +
Sbjct: 98 FENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYLH---SKRIA 151
Query: 472 HRDISSNNILL------NSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
H D+ NI+L N +++ + DFG A + A + + + G+ ++APE+
Sbjct: 152 HFDLKPENIMLLDKNVPNPRIK--LIDFGIAHKIEAGNEFKNIF-GTPEFVAPEIVNYEP 208
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
+ + D++S GV+T +L G P
Sbjct: 209 LGLEADMWSIGVITYILLSGASP 231
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 81/205 (39%), Gaps = 41/205 (20%)
Query: 377 IGTGAYGSVYKAQL------PNGRVFALKKLNS--PETEELAF------IRSFRNEAQV- 421
+G GA+G VY+ Q+ P+ A+K L E +EL F I F ++ V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 422 --------------LSQMERGSLFRILHN----DAEAVELDWAKRVNIVKAMAHALAYLH 463
L M G L L ++ L +++ + +A YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 464 HDCSPSVVHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNQTLLAG--SYGYIAP 518
+ +HRDI++ N LL VA DFG A+ ++ S + ++ P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVL 543
E + T K D +SFGV+ E+
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIF 240
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 85/202 (42%), Gaps = 29/202 (14%)
Query: 370 KIDSKYCIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--- 425
+ D +GTG++G V + +G +A+K L+ + +L I NE ++L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 426 ----------ERGSLFRILHNDAEAVELDWAKRVN---------IVKAMAHALAYLHHDC 466
+ +L+ ++ A +R+ + YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH--- 158
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVM 526
S +++RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGY 215
Query: 527 TEKYDVYSFGVVTLEVLMGKHP 548
+ D ++ GV+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 28/125 (22%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS-------------KLEAFVADFGT 495
+++++ +A +A+LH S ++HRD+ NIL+++ L ++DFG
Sbjct: 118 ISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 496 ARLLHADS----SNQTLLAGSYGYIAPE-------LAYTMVMTEKYDVYSFGVVTLEVL- 543
+ L + N +G+ G+ APE L +T D++S G V +L
Sbjct: 175 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 544 MGKHP 548
GKHP
Sbjct: 235 KGKHP 239
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 94/228 (41%), Gaps = 58/228 (25%)
Query: 365 MPTPRKIDSKYCIG----TGAYGSVYKA-----------------------QLPNG---- 393
M ++S+Y +G +G +GSVY +LPNG
Sbjct: 23 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 82
Query: 394 -RVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVE--LDW-AKRV 449
V LKK++S F ++L ER F ++ E V+ D+ +R
Sbjct: 83 MEVVLLKKVSS----------GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG 132
Query: 450 NIVKAMAHAL------AYLH-HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHA 501
+ + +A + A H H+C V+HRDI NIL++ ++ E + DFG+ LL
Sbjct: 133 ALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL-- 188
Query: 502 DSSNQTLLAGSYGYIAPE-LAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
+ T G+ Y PE + Y V+S G++ +++ G P
Sbjct: 189 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 236
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 34/200 (17%)
Query: 377 IGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILH 435
IG G +G V+ +L + + A+K ET F EA++L Q ++ R++
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCR--ETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 436 N-----------------------DAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVH 472
E L + +V A + YL C +H
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIH 236
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHAD---SSNQTLLAGSYGYIAPELAYTMVMTEK 529
RD+++ N L+ K ++DFG +R AD +++ L + APE + +
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSR-EEADGVXAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 530 YDVYSFGVVTLEVL-MGKHP 548
DV+SFG++ E +G P
Sbjct: 296 SDVWSFGILLWETFSLGASP 315
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 44/207 (21%)
Query: 377 IGTGAYGSVYKA-----------------------QLPNG-----RVFALKKLNSPETEE 408
+G+G +GSVY +LPNG V LKK++S +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 409 LAFIRSFRNEAQVLSQMERGS----LFR-ILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
+ + F + +ER LF I A EL + +++A+ H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC----- 159
Query: 464 HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LA 521
H+C V+HRDI NIL++ ++ E + DFG+ LL + T G+ Y PE +
Sbjct: 160 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIR 215
Query: 522 YTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y V+S G++ +++ G P
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
Query: 415 FRNEAQVLSQME---RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471
F N+ V+ +E G LF L AE L + +K + + YLH S +
Sbjct: 77 FENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYLH---SKRIA 130
Query: 472 HRDISSNNILL------NSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
H D+ NI+L N +++ + DFG A + A + + + G+ ++APE+
Sbjct: 131 HFDLKPENIMLLDKNVPNPRIK--LIDFGIAHKIEAGNEFKNIF-GTPEFVAPEIVNYEP 187
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
+ + D++S GV+T +L G P
Sbjct: 188 LGLEADMWSIGVITYILLSGASP 210
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 44/207 (21%)
Query: 377 IGTGAYGSVYKA-----------------------QLPNG-----RVFALKKLNSPETEE 408
+G+G +GSVY +LPNG V LKK++S +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 409 LAFIRSFRNEAQVLSQMERGS----LFR-ILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
+ + F + +ER LF I A EL + +++A+ H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC----- 158
Query: 464 HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LA 521
H+C V+HRDI NIL++ ++ E + DFG+ LL + T G+ Y PE +
Sbjct: 159 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIR 214
Query: 522 YTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y V+S G++ +++ G P
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAP 518
YLH S +++RD+ N+L++ + VADFG A+ + + L G+ Y+AP
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT---WXLCGTPEYLAP 208
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
E+ + + D ++ GV+ E+ G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 44/207 (21%)
Query: 377 IGTGAYGSVYKA-----------------------QLPNG-----RVFALKKLNSPETEE 408
+G+G +GSVY +LPNG V LKK++S +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 409 LAFIRSFRNEAQVLSQMERGS----LFR-ILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
+ + F + +ER LF I A EL + +++A+ H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC----- 159
Query: 464 HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LA 521
H+C V+HRDI NIL++ ++ E + DFG+ LL + T G+ Y PE +
Sbjct: 160 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIR 215
Query: 522 YTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y V+S G++ +++ G P
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 85/202 (42%), Gaps = 29/202 (14%)
Query: 370 KIDSKYCIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--- 425
+ D +GTG++G V + +G +A+K L+ + +L I NE ++L +
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 426 ----------ERGSLFRILHNDAEAVELDWAKRVN---------IVKAMAHALAYLHHDC 466
+ +L+ ++ A +R+ + YLH
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH--- 179
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVM 526
S +++RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ +
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGY 236
Query: 527 TEKYDVYSFGVVTLEVLMGKHP 548
+ D ++ GV+ E+ G P
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPP 258
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 85/202 (42%), Gaps = 29/202 (14%)
Query: 370 KIDSKYCIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--- 425
+ D +GTG++G V + +G +A+K L+ + +L I NE ++L +
Sbjct: 37 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 96
Query: 426 ----------ERGSLFRILHNDAEAVELDWAKRVN---------IVKAMAHALAYLHHDC 466
+ +L+ ++ A +R+ + YLH
Sbjct: 97 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH--- 153
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVM 526
S +++RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ +
Sbjct: 154 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGY 210
Query: 527 TEKYDVYSFGVVTLEVLMGKHP 548
+ D ++ GV+ E+ G P
Sbjct: 211 NKAVDWWALGVLIYEMAAGYPP 232
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 31/203 (15%)
Query: 370 KIDSKYCIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--- 425
+ D +GTG++G V + +G +A+K L+ + +L I NE ++L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 426 ----------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHD 465
+ +L+ ++ A +R+ + HA YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH-- 158
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
S +++RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKG 214
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYG 514
+A + YL VHRD+++ N +L+ VADFG AR + D ++ +
Sbjct: 133 VARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDI-LDREYYSVQQHRHA 188
Query: 515 -----YIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
+ A E T T K DV+SFGV+ E+L P
Sbjct: 189 RLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 94/228 (41%), Gaps = 58/228 (25%)
Query: 365 MPTPRKIDSKYCIG----TGAYGSVYKA-----------------------QLPNG---- 393
M ++S+Y +G +G +GSVY +LPNG
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 394 -RVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVE--LDW-AKRV 449
V LKK++S F ++L ER F ++ E V+ D+ +R
Sbjct: 61 MEVVLLKKVSS----------GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG 110
Query: 450 NIVKAMAHAL------AYLH-HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHA 501
+ + +A + A H H+C V+HRDI NIL++ ++ E + DFG+ LL
Sbjct: 111 ALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL-- 166
Query: 502 DSSNQTLLAGSYGYIAPE-LAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
+ T G+ Y PE + Y V+S G++ +++ G P
Sbjct: 167 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 25/115 (21%)
Query: 450 NIVKAMAHALAYLHHDCSPSVVHRDISSNNILL-NSKLEAF------------------V 490
++ + HAL +LH + + H D+ NIL NS+ E V
Sbjct: 127 HMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRV 183
Query: 491 ADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMG 545
ADFG+A D + T + + Y PE+ + + DV+S G + E G
Sbjct: 184 ADFGSATF---DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 44/207 (21%)
Query: 377 IGTGAYGSVYKA-----------------------QLPNG-----RVFALKKLNSPETEE 408
+G+G +GSVY +LPNG V LKK++S +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 409 LAFIRSFRNEAQVLSQMER----GSLFR-ILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
+ + F + +ER LF I A EL + +++A+ H
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC----- 173
Query: 464 HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LA 521
H+C V+HRDI NIL++ ++ E + DFG+ LL + T G+ Y PE +
Sbjct: 174 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIR 229
Query: 522 YTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y V+S G++ +++ G P
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 31/203 (15%)
Query: 370 KIDSKYCIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--- 425
+ D +GTG++G V + +G +A+K L+ + +L I NE ++L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 426 ----------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHD 465
+ +L+ ++ A +R+ + HA YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH-- 158
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
S +++RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKG 214
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 44/207 (21%)
Query: 377 IGTGAYGSVYKA-----------------------QLPNG-----RVFALKKLNSPETEE 408
+G+G +GSVY +LPNG V LKK++S +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 409 LAFIRSFRNEAQVLSQMERGS----LFR-ILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
+ + F + +ER LF I A EL + +++A+ H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC----- 159
Query: 464 HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LA 521
H+C V+HRDI NIL++ ++ E + DFG+ LL + T G+ Y PE +
Sbjct: 160 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIR 215
Query: 522 YTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y V+S G++ +++ G P
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 44/207 (21%)
Query: 377 IGTGAYGSVYKA-----------------------QLPNG-----RVFALKKLNSPETEE 408
+G+G +GSVY +LPNG V LKK++S +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 409 LAFIRSFRNEAQVLSQMERGS----LFR-ILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
+ + F + +ER LF I A EL + +++A+ H
Sbjct: 124 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC----- 178
Query: 464 HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LA 521
H+C V+HRDI NIL++ ++ E + DFG+ LL + T G+ Y PE +
Sbjct: 179 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIR 234
Query: 522 YTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y V+S G++ +++ G P
Sbjct: 235 YHRYHGRSAAVWSLGILLYDMVCGDIP 261
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 44/207 (21%)
Query: 377 IGTGAYGSVYKA-----------------------QLPNG-----RVFALKKLNSPETEE 408
+G+G +GSVY +LPNG V LKK++S +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 409 LAFIRSFRNEAQVLSQMERGS----LFR-ILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
+ + F + +ER LF I A EL + +++A+ H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC----- 158
Query: 464 HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LA 521
H+C V+HRDI NIL++ ++ E + DFG+ LL + T G+ Y PE +
Sbjct: 159 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIR 214
Query: 522 YTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y V+S G++ +++ G P
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 31/203 (15%)
Query: 370 KIDSKYCIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--- 425
+ D +GTG++G V + +G +A+K L+ + +L I NE ++L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 426 ----------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHD 465
+ +L+ ++ A +R+ + HA YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH-- 158
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
S +++RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKG 214
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 44/207 (21%)
Query: 377 IGTGAYGSVYKA-----------------------QLPNG-----RVFALKKLNSPETEE 408
+G+G +GSVY +LPNG V LKK++S +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 409 LAFIRSFRNEAQVLSQMERGS----LFR-ILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
+ + F + +ER LF I A EL + +++A+ H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC----- 158
Query: 464 HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LA 521
H+C V+HRDI NIL++ ++ E + DFG+ LL + T G+ Y PE +
Sbjct: 159 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIR 214
Query: 522 YTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y V+S G++ +++ G P
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 44/207 (21%)
Query: 377 IGTGAYGSVYKA-----------------------QLPNG-----RVFALKKLNSPETEE 408
+G+G +GSVY +LPNG V LKK++S +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 409 LAFIRSFRNEAQVLSQMERGS----LFR-ILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
+ + F + +ER LF I A EL + +++A+ H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC----- 159
Query: 464 HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LA 521
H+C V+HRDI NIL++ ++ E + DFG+ LL + T G+ Y PE +
Sbjct: 160 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIR 215
Query: 522 YTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y V+S G++ +++ G P
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 34/200 (17%)
Query: 377 IGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILH 435
IG G +G V+ +L + + A+K ET F EA++L Q ++ R++
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCR--ETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 436 N-----------------------DAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVH 472
E L + +V A + YL C +H
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIH 236
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHAD---SSNQTLLAGSYGYIAPELAYTMVMTEK 529
RD+++ N L+ K ++DFG +R AD +++ L + APE + +
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSR-EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 530 YDVYSFGVVTLEVL-MGKHP 548
DV+SFG++ E +G P
Sbjct: 296 SDVWSFGILLWETFSLGASP 315
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 25/115 (21%)
Query: 450 NIVKAMAHALAYLHHDCSPSVVHRDISSNNILL-NSKLEAF------------------V 490
++ + HAL +LH + + H D+ NIL NS+ E V
Sbjct: 136 HMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRV 192
Query: 491 ADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMG 545
ADFG+A D + T + + Y PE+ + + DV+S G + E G
Sbjct: 193 ADFGSATF---DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 31/203 (15%)
Query: 370 KIDSKYCIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--- 425
+ D +GTG++G V + +G +A+K L+ + +L I NE ++L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 426 ----------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHD 465
+ +L+ ++ A +R+ + HA YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH-- 158
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
S +++RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKG 214
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 44/207 (21%)
Query: 377 IGTGAYGSVYKA-----------------------QLPNG-----RVFALKKLNSPETEE 408
+G+G +GSVY +LPNG V LKK++S +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 409 LAFIRSFRNEAQVLSQMERGS----LFR-ILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
+ + F + +ER LF I A EL + +++A+ H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC----- 158
Query: 464 HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LA 521
H+C V+HRDI NIL++ ++ E + DFG+ LL + T G+ Y PE +
Sbjct: 159 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIR 214
Query: 522 YTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y V+S G++ +++ G P
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 13/103 (12%)
Query: 453 KAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS 512
+ + A+ Y H +VHRD+ + N+LL++ + +ADFG + + G+
Sbjct: 120 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDAFCGA 175
Query: 513 YGYIAPELAYTMVMTEKY-----DVYSFGVVTLEVLMGKHPRD 550
Y APEL +KY DV+S GV+ ++ G P D
Sbjct: 176 PPYAAPEL----FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 44/207 (21%)
Query: 377 IGTGAYGSVYKA-----------------------QLPNG-----RVFALKKLNSPETEE 408
+G+G +GSVY +LPNG V LKK++S +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 409 LAFIRSFRNEAQVLSQMERGS----LFR-ILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
+ + F + +ER LF I A EL + +++A+ H
Sbjct: 111 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC----- 165
Query: 464 HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LA 521
H+C V+HRDI NIL++ ++ E + DFG+ LL + T G+ Y PE +
Sbjct: 166 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIR 221
Query: 522 YTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y V+S G++ +++ G P
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMVCGDIP 248
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 44/207 (21%)
Query: 377 IGTGAYGSVYKA-----------------------QLPNG-----RVFALKKLNSPETEE 408
+G+G +GSVY +LPNG V LKK++S +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 409 LAFIRSFRNEAQVLSQMERGS----LFR-ILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
+ + F + +ER LF I A EL + +++A+ H
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC----- 173
Query: 464 HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LA 521
H+C V+HRDI NIL++ ++ E + DFG+ LL + T G+ Y PE +
Sbjct: 174 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIR 229
Query: 522 YTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y V+S G++ +++ G P
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 85/202 (42%), Gaps = 29/202 (14%)
Query: 370 KIDSKYCIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--- 425
+ D +GTG++G V + +G +A+K L+ + +L I NE ++L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 426 ----------ERGSLFRILHNDAEAVELDWAKRVN---------IVKAMAHALAYLHHDC 466
+ +L+ ++ A +R+ + YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH--- 158
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVM 526
S +++RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGY 215
Query: 527 TEKYDVYSFGVVTLEVLMGKHP 548
+ D ++ GV+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
+ + +A +AYL+ + VHR++++ N ++ + DFG R ++ +
Sbjct: 134 IQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 509 LAG--SYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
G ++APE V T D++SFGVV E+
Sbjct: 191 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 85/202 (42%), Gaps = 29/202 (14%)
Query: 370 KIDSKYCIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--- 425
+ D +GTG++G V + +G +A+K L+ + +L I NE ++L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 426 ----------ERGSLFRILHNDAEAVELDWAKRVN---------IVKAMAHALAYLHHDC 466
+ +L+ ++ A +R+ + YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH--- 158
Query: 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVM 526
S +++RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGY 215
Query: 527 TEKYDVYSFGVVTLEVLMGKHP 548
+ D ++ GV+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 54/212 (25%)
Query: 377 IGTGAYGSVYKA-----------------------QLPNG-----RVFALKKLNSPETEE 408
+G+G +GSVY +LPNG V LKK++S
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS----- 70
Query: 409 LAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVE--LDW-AKRVNIVKAMAHAL------ 459
F ++L ER F ++ E V+ D+ +R + + +A +
Sbjct: 71 -----GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 460 AYLH-HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIA 517
A H H+C V+HRDI NIL++ ++ E + DFG+ LL + T G+ Y
Sbjct: 126 AVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSP 181
Query: 518 PE-LAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
PE + Y V+S G++ +++ G P
Sbjct: 182 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 54/212 (25%)
Query: 377 IGTGAYGSVYKA-----------------------QLPNG-----RVFALKKLNSPETEE 408
+G+G +GSVY +LPNG V LKK++S
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS----- 85
Query: 409 LAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVE--LDW-AKRVNIVKAMAHAL------ 459
F ++L ER F ++ E V+ D+ +R + + +A +
Sbjct: 86 -----GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 140
Query: 460 AYLH-HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIA 517
A H H+C V+HRDI NIL++ ++ E + DFG+ LL + T G+ Y
Sbjct: 141 AVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSP 196
Query: 518 PE-LAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
PE + Y V+S G++ +++ G P
Sbjct: 197 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508
+ + +A +AYL+ + VHR++++ N ++ + DFG R ++ +
Sbjct: 133 IQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 189
Query: 509 LAG--SYGYIAPELAYTMVMTEKYDVYSFGVVTLEV 542
G ++APE V T D++SFGVV E+
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 31/203 (15%)
Query: 370 KIDSKYCIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--- 425
+ D +GTG++G V + +G +A+K L+ + +L I NE ++L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 426 ----------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHD 465
+ +L+ ++ A +R+ + HA YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH-- 158
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
S +++RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLXGTPEYLAPEIILSKG 214
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 25/115 (21%)
Query: 450 NIVKAMAHALAYLHHDCSPSVVHRDISSNNILL-NSKLEAF------------------V 490
++ + HAL +LH + + H D+ NIL NS+ E V
Sbjct: 159 HMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRV 215
Query: 491 ADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMG 545
ADFG+A D + T + + Y PE+ + + DV+S G + E G
Sbjct: 216 ADFGSATF---DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 267
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 146 SIPSEISALSKLQLLDLSSNRLR------GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLI 199
+P+EI LS L++LDLS NRL G L Y NM+ LP E GNL NL
Sbjct: 261 ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMV-TTLPWEFGNLCNLQ 319
Query: 200 ELDVGDNSL 208
L V N L
Sbjct: 320 FLGVEGNPL 328
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 222 LKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNS 281
L L L N L+ LP EI NL NL +LD+ +N + +P+ LG L Y N +
Sbjct: 249 LTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDNMV-T 306
Query: 282 SIPNELTRLTQLFHLDLSSNKLSGKI 307
++P E L L L + N L +
Sbjct: 307 TLPWEFGNLCNLQFLGVEGNPLEKQF 332
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 248 LDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKI 307
LD+ N I I + + + L+ L L+ N + +P E+ L+ L LDLS N+L+ +
Sbjct: 229 LDLSNLQIFN-ISANIFKYDFLTRLYLNGNSL-TELPAEIKNLSNLRVLDLSHNRLTS-L 285
Query: 308 PSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGR 354
P+++ S L + +N + ++P E L L +L + GN L +
Sbjct: 286 PAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQ 331
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 283 IPNELTRLTQLFH-LDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRL 341
+P + QL+H LDLS+ ++ I + I + LT L L+ N++ +P EI LS L
Sbjct: 215 MPKDSKYDDQLWHALDLSNLQIFN-ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNL 272
Query: 342 DYLNLSGNKLS 352
L+LS N+L+
Sbjct: 273 RVLDLSHNRLT 283
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 44/207 (21%)
Query: 377 IGTGAYGSVYKA-----------------------QLPNG-----RVFALKKLNSPETEE 408
+G+G +GSVY +LPNG V LKK++S +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 409 LAFIRSFRNEAQVLSQMER----GSLFR-ILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
+ + F + +ER LF I A EL + +++A+ H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC----- 126
Query: 464 HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LA 521
H+C V+HRDI NIL++ ++ E + DFG+ LL + T G+ Y PE +
Sbjct: 127 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIR 182
Query: 522 YTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y V+S G++ +++ G P
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 54/212 (25%)
Query: 377 IGTGAYGSVYKA-----------------------QLPNG-----RVFALKKLNSPETEE 408
+G+G +GSVY +LPNG V LKK++S
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS----- 85
Query: 409 LAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVE--LDW-AKRVNIVKAMAHAL------ 459
F ++L ER F ++ E V+ D+ +R + + +A +
Sbjct: 86 -----GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 140
Query: 460 AYLH-HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIA 517
A H H+C V+HRDI NIL++ ++ E + DFG+ LL + T G+ Y
Sbjct: 141 AVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSP 196
Query: 518 PE-LAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
PE + Y V+S G++ +++ G P
Sbjct: 197 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 44/207 (21%)
Query: 377 IGTGAYGSVYKA-----------------------QLPNG-----RVFALKKLNSPETEE 408
+G+G +GSVY +LPNG V LKK++S +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 409 LAFIRSFRNEAQVLSQMER----GSLFR-ILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
+ + F + +ER LF I A EL + +++A+ H
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC----- 130
Query: 464 HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LA 521
H+C V+HRDI NIL++ ++ E + DFG+ LL + T G+ Y PE +
Sbjct: 131 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIR 186
Query: 522 YTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y V+S G++ +++ G P
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 44/207 (21%)
Query: 377 IGTGAYGSVYKA-----------------------QLPNG-----RVFALKKLNSPETEE 408
+G+G +GSVY +LPNG V LKK++S +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 409 LAFIRSFRNEAQVLSQMER----GSLFR-ILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
+ + F + +ER LF I A EL + +++A+ H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC----- 126
Query: 464 HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LA 521
H+C V+HRDI NIL++ ++ E + DFG+ LL + T G+ Y PE +
Sbjct: 127 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIR 182
Query: 522 YTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y V+S G++ +++ G P
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 31/197 (15%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
+GTG++G V + + G +A+K L+ + +L I NE ++L +
Sbjct: 34 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 93
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHDCSPSVV 471
+ +L+ ++ +R+ + HA YLH S ++
Sbjct: 94 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH---SLDLI 149
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ + + D
Sbjct: 150 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT---LCGTPEYLAPEIILSKGYNKAVD 206
Query: 532 VYSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 207 WWALGVLIYEMAAGYPP 223
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 87/210 (41%), Gaps = 50/210 (23%)
Query: 377 IGTGAYGSVYKA-----------------------QLPNG-----RVFALKKLNSPETEE 408
+G+G +GSVY +LPNG V LKK++S
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS----- 66
Query: 409 LAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVE--LDW-AKRVNIVKAMAHALAY---- 461
F ++L ER F ++ E V+ D+ +R + + +A + +
Sbjct: 67 -----GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 462 -LHHDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE 519
+ H + V+HRDI NIL++ ++ E + DFG+ LL + T G+ Y PE
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPE 179
Query: 520 -LAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
+ Y V+S G++ +++ G P
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 44/207 (21%)
Query: 377 IGTGAYGSVYKA-----------------------QLPNG-----RVFALKKLNSPETEE 408
+G+G +GSVY +LPNG V LKK++S +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 409 LAFIRSFRNEAQVLSQMER----GSLFR-ILHNDAEAVELDWAKRVNIVKAMAHALAYLH 463
+ + F + +ER LF I A EL + +++A+ H
Sbjct: 75 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC----- 129
Query: 464 HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPE-LA 521
H+C V+HRDI NIL++ ++ E + DFG+ LL + T G+ Y PE +
Sbjct: 130 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIR 185
Query: 522 YTMVMTEKYDVYSFGVVTLEVLMGKHP 548
Y V+S G++ +++ G P
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMVCGDIP 212
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 87/203 (42%), Gaps = 31/203 (15%)
Query: 370 KIDSKYCIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--- 425
+ D +GTG++G V + +G +A+K L+ + +L I NE ++L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 426 ----------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHD 465
+ +L+ ++ A +R+ + HA YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH-- 158
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
S +++RD+ N++++ + V DFG A+ + + L G+ Y+APE+ +
Sbjct: 159 -SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIIISKG 214
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 31/197 (15%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
+GTG++G V + + G +A+K L+ + +L I NE ++L +
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHDCSPSVV 471
+ +L+ ++ +R+ + HA YLH S ++
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ + + D
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT---LCGTPEYLAPEIILSKGYNKAVD 221
Query: 532 VYSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 222 WWALGVLIYEMAAGYPP 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 31/197 (15%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
+GTG++G V + + G +A+K L+ + +L I NE ++L +
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHDCSPSVV 471
+ +L+ ++ +R+ + HA YLH S ++
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ + + D
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVD 221
Query: 532 VYSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 222 WWALGVLIYEMAAGYPP 238
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 31/156 (19%)
Query: 365 MPTPRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLS 423
M T K+D +G G Y +VYK + + ALK++ E EE A + R E +L
Sbjct: 1 METYIKLDK---LGEGTYATVYKGKSKLTDNLVALKEIRL-EHEEGAPCTAIR-EVSLLK 55
Query: 424 QMERG---SLFRILHNDA------EAVELDWAKRV----NIVK---------AMAHALAY 461
++ +L I+H + E ++ D + + NI+ + LAY
Sbjct: 56 DLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAY 115
Query: 462 LHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTAR 497
H V+HRD+ N+L+N + E +ADFG AR
Sbjct: 116 CHRQ---KVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 31/197 (15%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
+GTG++G V + + G +A+K L+ + +L I NE ++L +
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHDCSPSVV 471
+ +L+ ++ +R+ + HA YLH S ++
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ + + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 532 VYSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 221 WWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 31/197 (15%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
+GTG++G V + + G +A+K L+ + +L I NE ++L +
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHDCSPSVV 471
+ +L+ ++ +R+ + HA YLH S ++
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ + + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 532 VYSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 221 WWALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 31/197 (15%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
+GTG++G V + + G +A+K L+ + +L I NE ++L +
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHDCSPSVV 471
+ +L+ ++ +R+ + HA YLH S ++
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ + + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 532 VYSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 221 WWALGVLIYEMAAGYPP 237
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 398 LKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDAEAVELDWAKRVNIVKA--- 454
LKKL+ P +L + NE + E L N +E+ K ++ +A
Sbjct: 90 LKKLDHPNVVKLVEVLDDPNEDHLYMVFE-------LVNQGPVMEVPTLKPLSEDQARFY 142
Query: 455 ---MAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAG 511
+ + YLH+ ++HRDI +N+L+ +ADFG + + + G
Sbjct: 143 FQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVG 199
Query: 512 SYGYIAPE-LAYT--MVMTEKYDVYSFGVVTLEVLMGKHP 548
+ ++APE L+ T + + DV++ GV + G+ P
Sbjct: 200 TPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 71/168 (42%), Gaps = 13/168 (7%)
Query: 225 LILAQNQLSGLPQEI-GNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSI 283
L L N L LP + L +L L +G N + + L+YL+LS NQ S+
Sbjct: 33 LDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ-SL 91
Query: 284 PNEL-TRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLD 342
PN + +LTQL L L++N+L + L L L N +K G +L+ L
Sbjct: 92 PNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQ 151
Query: 343 YLNLSGNKLSGRVP-------YSNKH---LSSMPTPRKIDSKYCIGTG 380
Y+ L N P + NKH + + DS C G+G
Sbjct: 152 YIWLHDNPWDCTCPGIRYLSEWINKHSGVVRNSAGSVAPDSAKCSGSG 199
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 264 GLFSDLSYLDLSCNQFNSSIPN----ELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTW 319
G+ + +YLDL N S +PN ELT LTQL+ L NKL + LT+
Sbjct: 25 GIPAQTTYLDLETNSLKS-LPNGVFDELTSLTQLY---LGGNKLQSLPNGVFNKLTSLTY 80
Query: 320 LDLSNNNIKGSIPGEITKLSRLDYLNLSGNKL 351
L+LS N ++ G KL++L L L+ N+L
Sbjct: 81 LNLSTNQLQSLPNGVFDKLTQLKELALNTNQL 112
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 146 SIPSEI-SALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLKN 197
S+P+ + L+ L L L N+L+ +LT+L Y++LS N L L L
Sbjct: 42 SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQ 101
Query: 198 LIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEI 239
L EL + N L +LT LK L L QNQL +P +
Sbjct: 102 LKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGV 143
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 31/197 (15%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
+GTG++G V + + G +A+K L+ + +L I NE ++L +
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE 107
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHDCSPSVV 471
+ +L+ ++ +R+ + HA YLH S ++
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ N++++ + V DFG A+ + + L G+ Y+APE+ + + D
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGLAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 532 VYSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 221 WWALGVLIYEMAAGYPP 237
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 31/197 (15%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
+GTG++G V + + G +A+K L+ + +L I NE ++L +
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE 107
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHDCSPSVV 471
+ +L+ ++ +R+ + HA YLH S ++
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ N++++ + V DFG A+ + + L G+ Y+APE+ + + D
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGLAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 532 VYSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 221 WWALGVLIYEMAAGYPP 237
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 31/197 (15%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
+GTG++G V + + G +A+K L+ + +L I NE ++L +
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHDCSPSVV 471
+ +L+ ++ +R+ + HA YLH S ++
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ N++++ + V DFG A+ + + L G+ Y+APE+ + + D
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVD 221
Query: 532 VYSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 222 WWALGVLIYEMAAGYPP 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 31/197 (15%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
+GTG++G V + + G +A+K L+ + +L I NE ++L +
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHDCSPSVV 471
+ +L+ ++ +R+ + HA YLH S ++
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ N++++ + V DFG A+ + + L G+ Y+APE+ + + D
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVD 221
Query: 532 VYSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 222 WWALGVLIYEMAAGYPP 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 31/197 (15%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
+GTG++G V + + G +A+K L+ + +L I NE ++L +
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHDCSPSVV 471
+ +L+ ++ +R+ + HA YLH S ++
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ N++++ + V DFG A+ + + L G+ Y+APE+ + + D
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 532 VYSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 221 WWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
+GTG++G V + + G +A+K L+ + +L I NE ++L +
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVN---------IVKAMAHALAYLHHDCSPSVVH 472
+ +L+ ++ +R+ + YLH S +++
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIY 165
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDV 532
RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ + + D
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 533 YSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 223 WALGVLIYEMAAGYPP 238
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 31/197 (15%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
+GTG++G V + + G +A+K L+ + +L I NE ++L +
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHDCSPSVV 471
+ +L+ ++ +R+ + HA YLH S ++
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ N++++ + V DFG A+ + + L G+ Y+APE+ + + D
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 532 VYSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 221 WWALGVLIYEMAAGYPP 237
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 82/204 (40%), Gaps = 45/204 (22%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL 434
+GTG++G V + + G +A+K L+ + +L I NE ++L + L ++
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL- 106
Query: 435 HNDAEAVELDWAKRVNIVKAMAHA------------------------------LAYLHH 464
E + N+ M +A YLH
Sbjct: 107 -------EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH- 158
Query: 465 DCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTM 524
S +++RD+ N++++ + V DFG A+ + + L G+ Y+APE+ +
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSK 213
Query: 525 VMTEKYDVYSFGVVTLEVLMGKHP 548
+ D ++ GV+ E+ G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
+GTG++G V + + G +A+K L+ + +L I NE ++L +
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVN---------IVKAMAHALAYLHHDCSPSVVH 472
+ +L+ ++ +R+ + YLH S +++
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIY 164
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDV 532
RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ + + D
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 533 YSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
+GTG++G V + + G +A+K L+ + +L I NE ++L +
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVN---------IVKAMAHALAYLHHDCSPSVVH 472
+ +L+ ++ +R+ + YLH S +++
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIY 164
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDV 532
RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ + + D
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 533 YSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPP 237
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 87/203 (42%), Gaps = 31/203 (15%)
Query: 370 KIDSKYCIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--- 425
+ D +GTG++G V + +G +A+K L+ + +L I NE ++L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 426 ----------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHD 465
+ +L+ ++ A +R+ + HA YLH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH-- 158
Query: 466 CSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV 525
S +++RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKG 214
Query: 526 MTEKYDVYSFGVVTLEVLMGKHP 548
+ D ++ GV+ ++ G P
Sbjct: 215 YNKAVDWWALGVLIYQMAAGYPP 237
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 453 KAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGS 512
+ + A+ Y H +VHRD+ + N+LL++ +ADFG + + G+
Sbjct: 120 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEF-TFGNKLDAFCGA 175
Query: 513 YGYIAPELAYTMVMTEKY-----DVYSFGVVTLEVLMGKHPRD 550
Y APEL +KY DV+S GV+ ++ G P D
Sbjct: 176 PPYAAPEL----FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 31/197 (15%)
Query: 376 CIGTGAYGSVYKAQLPN-GRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
+GTG++G V + G FA+K L+ + +L I NE ++L +
Sbjct: 48 TLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHDCSPSVV 471
+ +L+ ++ +R+ + HA YLH S ++
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ + + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 532 VYSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 221 WWALGVLIYEMAAGYPP 237
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 16/144 (11%)
Query: 455 MAHALAYLHHDCSPSVVHRDISSNNILLNSKLE-AFVADFGTARLLHADSSNQTLLAGSY 513
+A + H S VVHRDI NIL++ + A + DFG+ LLH + T G+
Sbjct: 145 FGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP--YTDFDGTR 202
Query: 514 GYIAPE-LAYTMVMTEKYDVYSFGVVTLEVLMGKHP--RD-------LHSTLSSSYDPKI 563
Y PE ++ V+S G++ +++ G P RD LH S D
Sbjct: 203 VYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDCCA 262
Query: 564 MLIDVLDQRLPPPVDRKVIQDILL 587
++ L P P R +++ILL
Sbjct: 263 LIRRCL---APKPSSRPSLEEILL 283
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 31/197 (15%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
+GTG++G V + G FA+K L+ + +L I NE ++L +
Sbjct: 48 TLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHDCSPSVV 471
+ +L+ ++ +R+ + HA YLH S ++
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ + + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 532 VYSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 221 WWALGVLIYEMAAGYPP 237
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
+GTG++G V + + G +A+K L+ + +L I NE ++L +
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVN---------IVKAMAHALAYLHHDCSPSVVH 472
+ +L+ ++ +R+ + YLH S +++
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIY 165
Query: 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDV 532
RD+ N++++ + V DFG A+ + + L G+ Y+APE+ + + D
Sbjct: 166 RDLKPENLMIDQQGYIKVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 533 YSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 223 WALGVLIYEMAAGYPP 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 31/197 (15%)
Query: 376 CIGTGAYGSVYKAQ-LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------- 425
+GTG++G V + G FA+K L+ + +L I NE ++L +
Sbjct: 48 TLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHA----------LAYLHHDCSPSVV 471
+ +L+ ++ +R+ + HA YLH S ++
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYD 531
+RD+ N+L++ + V DFG A+ + + L G+ Y+APE+ + + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 532 VYSFGVVTLEVLMGKHP 548
++ GV+ E+ G P
Sbjct: 221 WWALGVLIYEMAAGYPP 237
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 451 IVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLL---HADSSNQT 507
+ + +AYLH + +HRD+++ N+LL++ + DFG A+ + H +
Sbjct: 139 FAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVRE 195
Query: 508 LLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
+ APE DV+SFGV E+L
Sbjct: 196 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 449 VNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKL---EAFVADFGTARLL-HADSS 504
+ ++K + + YLH + ++VH D+ NILL+S + + DFG +R + HA
Sbjct: 134 IRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL 190
Query: 505 NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
+ + G+ Y+APE+ +T D+++ G++ +L P
Sbjct: 191 REIM--GTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAP 518
YLH S +++RD+ N+L++ + V DFG A+ + + L G+ Y+AP
Sbjct: 147 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAP 200
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
E+ + + D ++ GV+ E+ G P
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAP 518
YLH S +++RD+ N+L++ + V DFG A+ + + L G+ Y+AP
Sbjct: 147 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAP 200
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
E+ + + D ++ GV+ E+ G P
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 450 NIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLL 509
+V+ M + + S + +HRD+++ N +L + VADFG +R +++ +
Sbjct: 138 TLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGC 197
Query: 510 AGS--YGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHP 548
A ++A E + T DV++FGV E++ G+ P
Sbjct: 198 ASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 106/257 (41%), Gaps = 69/257 (26%)
Query: 377 IGTGAYGSVYKA--QLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM---ERGSLF 431
+G GA+G V + GR A+K + + + + + R+E QVL + + S F
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDR----YCEAARSEIQVLEHLNTTDPNSTF 77
Query: 432 RIL-------HNDAEAVEL--------DWAK-------RVNIVKAMAHALA----YLHHD 465
R + H+ + D+ K R++ ++ MA+ + +LH
Sbjct: 78 RCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH-- 135
Query: 466 CSPSVVHRDISSNNILL--NSKLEAF-----------------VADFGTARLLHADSSNQ 506
S + H D+ NIL + EA+ V DFG+A D +
Sbjct: 136 -SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY---DDEHH 191
Query: 507 TLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLI 566
+ L + Y APE+ + ++ DV+S G + +E +G T+ ++D K L
Sbjct: 192 STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG-------FTVFPTHDSKEHL- 243
Query: 567 DVLDQRLPPPVDRKVIQ 583
+ +R+ P+ + +IQ
Sbjct: 244 -AMMERILGPLPKHMIQ 259
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAP 518
YLH S +++RD+ N+L++ + V DFG A+ + + L G+ Y+AP
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAP 208
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
E+ + + D ++ GV+ E+ G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAP 518
YLH S +++RD+ N+L++ + V DFG A+ + + L G+ Y+AP
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAP 208
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
E+ + + D ++ GV+ E+ G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAP 518
YLH S +++RD+ N+L++ + V DFG A+ + + L G+ Y+AP
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAP 208
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
E+ + + D ++ GV+ E+ G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 459 LAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAP 518
YLH S +++RD+ N+L++ + V DFG A+ + + L G+ Y+AP
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAP 228
Query: 519 ELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548
E+ + + D ++ GV+ E+ G P
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 63/131 (48%), Gaps = 12/131 (9%)
Query: 451 IVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLA 510
I+K++ ++ +Y+H++ ++ HRD+ +NIL++ ++DFG + + +
Sbjct: 156 IIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGS--R 211
Query: 511 GSYGYIAPELA--YTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDV 568
G+Y ++ PE + K D++S G+ + P L +L ++ ++
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFN------NI 265
Query: 569 LDQRLPPPVDR 579
+ + P+DR
Sbjct: 266 RTKNIEYPLDR 276
>pdb|2XOT|A Chain A, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
pdb|2XOT|B Chain B, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
Length = 361
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 70/162 (43%), Gaps = 37/162 (22%)
Query: 159 LLDLSSN---RLRG-----RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIG 210
LLDLS N RLR RLTNL+ + LS N L + + + NL LD+ N L
Sbjct: 43 LLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHT 102
Query: 211 PIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLS 270
S L +L++L+L NN I+ + + L
Sbjct: 103 LDEFLFSDLQALEVLLLY-----------------------NNHIVVVDRNAFEDMAQLQ 139
Query: 271 YLDLSCNQFNSSIPNEL----TRLTQLFHLDLSSNKLSGKIP 308
L LS NQ S P EL +L +L LDLSSNKL K+P
Sbjct: 140 KLYLSQNQI-SRFPVELIKDGNKLPKLMLLDLSSNKLK-KLP 179
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Query: 219 LTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDI----IGPIPSTLGLFSDLSYLDL 274
L + IL ++ QL +PQ + + LLD+ +N++ P+ L ++L L L
Sbjct: 17 LCASNILSCSKQQLPNVPQSLPSYT--ALLDLSHNNLSRLRAEWTPTRL---TNLHSLLL 71
Query: 275 SCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGE 334
S N N + L +LDLSSN L + ++ L L L NN+I
Sbjct: 72 SHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNA 131
Query: 335 ITKLSRLDYLNLSGNKLSGRVP 356
+++L L LS N++S R P
Sbjct: 132 FEDMAQLQKLYLSQNQIS-RFP 152
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 32/207 (15%)
Query: 171 LTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQN 230
L +L + LS+N++ + L +L L++ DN L L+ L+ L L N
Sbjct: 58 LRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNN 117
Query: 231 QLSGLPQEIGN-LKNLMLLDVGNNDIIGPI-PSTLGLFSDLSYLDLS-CNQFNSSIPNEL 287
+ +P N + +L LD+G + I + +L YL+L CN IPN L
Sbjct: 118 PIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNL--KDIPN-L 174
Query: 288 TRLTQLFHLDLSSNKLSGKIP----------------SQIASME--------DLTWLDLS 323
T L +L L+LS N+L P +Q+A++E L L+LS
Sbjct: 175 TALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLS 234
Query: 324 NNNIKGSIPGEI-TKLSRLDYLNLSGN 349
+NN+ S+P ++ T L RL+ ++L+ N
Sbjct: 235 HNNLM-SLPHDLFTPLHRLERVHLNHN 260
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 8/169 (4%)
Query: 201 LDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEIG---NLKNLMLLDVGNNDIIG 257
L++ +NS+ T L L+IL L++N + + E+G L +L L++ +N +
Sbjct: 40 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKI--EVGAFNGLPSLNTLELFDNRLTT 97
Query: 258 PIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSS-NKLSGKIPSQIASMED 316
S L L L N S R+ L LDL +L + + +
Sbjct: 98 VPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVN 157
Query: 317 LTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYSNKHLSSM 365
L +L+L N+K IP +T L RL+ L LSGN+L P S + L+S+
Sbjct: 158 LRYLNLGMCNLK-DIPN-LTALVRLEELELSGNRLDLIRPGSFQGLTSL 204
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 105/272 (38%), Gaps = 63/272 (23%)
Query: 119 RLSHLNFSCFP--NLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRGR------ 170
L + F FP L+SL+ L + G+ SE+ L L+ LDLS N L +
Sbjct: 310 ELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVD-LPSLEFLDLSRNGLSFKGCCSQS 368
Query: 171 ---LTNLNYMSLSRNMLGGLLPQEIG------------------------NLKNLIELDV 203
T+L Y+ LS N + + +G +L+NLI LD+
Sbjct: 369 DFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 428
Query: 204 GDNSLIGPIPLTLSRLTSLKILILAQN--QLSGLPQEIGNLKNLMLLDVGNNDIIGPIPS 261
+ L+SL++L +A N Q + LP L+NL LD+ + P+
Sbjct: 429 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 488
Query: 262 TLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLD 321
S L L++S N F F LD K + L LD
Sbjct: 489 AFNSLSSLQVLNMSHNNF--------------FSLDTFPYK----------CLNSLQVLD 524
Query: 322 LSNNNIKGSIPGEITKL-SRLDYLNLSGNKLS 352
S N+I S E+ S L +LNL+ N +
Sbjct: 525 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 556
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 61/152 (40%), Gaps = 31/152 (20%)
Query: 160 LDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPI 212
LDLS N LR L + LSR + + +L +L L + N +
Sbjct: 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 92
Query: 213 PLTLSRLTSLKILILAQNQLSGLPQ-EIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSY 271
S L+SL+ L+ + L+ L IG+LK L L+V +N I
Sbjct: 93 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS-------------- 138
Query: 272 LDLSCNQFNSSIPNELTRLTQLFHLDLSSNKL 303
+P + LT L HLDLSSNK+
Sbjct: 139 ---------FKLPEYFSNLTNLEHLDLSSNKI 161
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 11/161 (6%)
Query: 394 RVFALKKLNSPETEELAFIRSFRNEA-QVLSQMERGSLF-RILHNDAEAVELDWAKRVNI 451
+ ALK L +L + N+ VL G LF I+ D + E RV +
Sbjct: 58 EIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE---ETRV-V 113
Query: 452 VKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFG-TARLLHADSSNQTLLA 510
+ + A+AY+H S HRD+ N+L + + + DFG A+ +
Sbjct: 114 FRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC 170
Query: 511 GSYGYIAPELAY-TMVMTEKYDVYSFGVVTLEVLMGKHPRD 550
GS Y APEL + + DV+S G++ ++ G P D
Sbjct: 171 GSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 428 GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILL----N 483
G LF L AE L + +K + + + YLH S + H D+ NI+L
Sbjct: 99 GELFDFL---AEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNV 152
Query: 484 SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVL 543
K + DFG A + + + + G+ ++APE+ + + D++S GV+T +L
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNEFKNIF-GTPAFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 544 MGKHP 548
G P
Sbjct: 212 SGASP 216
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,070,251
Number of Sequences: 62578
Number of extensions: 696681
Number of successful extensions: 4542
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 376
Number of HSP's that attempted gapping in prelim test: 2088
Number of HSP's gapped (non-prelim): 1639
length of query: 602
length of database: 14,973,337
effective HSP length: 104
effective length of query: 498
effective length of database: 8,465,225
effective search space: 4215682050
effective search space used: 4215682050
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)