Query 047576
Match_columns 602
No_of_seqs 750 out of 4904
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 22:01:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047576.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047576hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aw0_A HPDK1, 3-phosphoinositi 100.0 1E-41 3.5E-46 346.5 8.4 217 368-602 31-275 (311)
2 3omv_A RAF proto-oncogene seri 100.0 2.2E-41 7.6E-46 344.6 10.7 219 369-602 36-284 (307)
3 4b9d_A Serine/threonine-protei 100.0 1.2E-41 4.1E-46 351.6 7.6 219 368-602 23-267 (350)
4 4asz_A BDNF/NT-3 growth factor 100.0 2E-41 6.7E-46 344.8 8.5 217 369-602 13-273 (299)
5 1ogq_A PGIP-2, polygalacturona 100.0 7.2E-40 2.5E-44 337.0 19.7 282 64-354 3-307 (313)
6 4gt4_A Tyrosine-protein kinase 100.0 3.9E-41 1.3E-45 344.1 9.4 218 369-602 26-290 (308)
7 4fih_A Serine/threonine-protei 100.0 7.4E-41 2.5E-45 345.2 10.9 219 369-602 74-314 (346)
8 4aoj_A High affinity nerve gro 100.0 8E-41 2.7E-45 344.9 10.9 216 369-602 41-303 (329)
9 3ubd_A Ribosomal protein S6 ki 100.0 3.6E-41 1.2E-45 342.3 4.5 216 368-602 23-267 (304)
10 3hyh_A Carbon catabolite-derep 100.0 8.1E-40 2.8E-44 327.9 11.9 218 369-602 13-253 (275)
11 3fpq_A Serine/threonine-protei 100.0 8.1E-40 2.8E-44 330.7 12.0 215 372-602 29-273 (290)
12 4fie_A Serine/threonine-protei 100.0 7.3E-40 2.5E-44 346.1 11.1 216 369-602 151-391 (423)
13 3hmm_A TGF-beta receptor type- 100.0 2.4E-39 8.2E-44 331.0 12.8 225 369-602 3-281 (303)
14 4g3f_A NF-kappa-beta-inducing 100.0 1.5E-39 5.2E-44 334.5 10.9 210 369-602 58-300 (336)
15 4ase_A Vascular endothelial gr 100.0 7.7E-40 2.6E-44 340.3 8.7 220 368-602 63-331 (353)
16 4g31_A Eukaryotic translation 100.0 1.6E-38 5.6E-43 323.6 9.7 216 369-602 5-270 (299)
17 4eco_A Uncharacterized protein 100.0 1.9E-37 6.4E-42 349.3 15.5 287 62-358 25-451 (636)
18 3rgz_A Protein brassinosteroid 100.0 5.9E-37 2E-41 352.7 15.8 280 65-356 10-335 (768)
19 3v5w_A G-protein coupled recep 100.0 6.8E-37 2.3E-41 337.7 11.0 218 368-602 188-435 (689)
20 4b99_A Mitogen-activated prote 100.0 4.2E-36 1.4E-40 317.5 12.7 182 368-553 53-267 (398)
21 4f9c_A Cell division cycle 7-r 100.0 1.5E-35 5.1E-40 309.8 13.2 170 368-551 20-249 (361)
22 4ecn_A Leucine-rich repeat pro 100.0 6.3E-35 2.2E-39 335.8 17.7 286 63-357 265-690 (876)
23 4fcg_A Uncharacterized protein 100.0 2.6E-34 8.8E-39 297.5 16.3 257 65-353 25-315 (328)
24 3uto_A Twitchin; kinase, muscl 100.0 6.8E-35 2.3E-39 322.8 10.5 218 368-602 156-401 (573)
25 3rgz_A Protein brassinosteroid 100.0 1E-33 3.4E-38 325.8 20.3 233 124-358 413-723 (768)
26 1o6l_A RAC-beta serine/threoni 100.0 4.4E-34 1.5E-38 296.7 11.6 220 368-602 4-246 (337)
27 4dc2_A Protein kinase C IOTA t 100.0 3.9E-34 1.3E-38 303.0 11.4 224 368-602 51-303 (396)
28 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.6E-34 5.5E-39 301.9 7.7 217 368-602 22-265 (353)
29 2i0e_A Protein kinase C-beta I 100.0 4.9E-34 1.7E-38 298.2 9.9 217 368-602 19-262 (353)
30 2qkw_B Protein kinase; three-h 100.0 3.2E-33 1.1E-37 288.1 15.5 227 367-602 37-299 (321)
31 3a8x_A Protein kinase C IOTA t 100.0 1.5E-33 5E-38 293.8 11.9 227 368-602 8-260 (345)
32 3p86_A Serine/threonine-protei 100.0 1.3E-33 4.6E-38 289.6 11.4 220 368-602 36-282 (309)
33 3uim_A Brassinosteroid insensi 100.0 1.3E-33 4.6E-38 291.4 11.1 230 368-602 29-295 (326)
34 1xjd_A Protein kinase C, theta 100.0 1.1E-33 3.6E-38 294.7 9.8 217 368-602 16-259 (345)
35 1ogq_A PGIP-2, polygalacturona 100.0 3.5E-33 1.2E-37 287.1 11.8 226 129-358 50-287 (313)
36 1fot_A TPK1 delta, CAMP-depend 100.0 4.1E-33 1.4E-37 287.1 12.3 214 368-602 5-244 (318)
37 3fxz_A Serine/threonine-protei 100.0 4.4E-33 1.5E-37 284.1 12.0 219 368-602 19-260 (297)
38 3pfq_A PKC-B, PKC-beta, protei 100.0 5.1E-33 1.7E-37 314.2 13.0 217 368-602 340-583 (674)
39 3s95_A LIMK-1, LIM domain kina 100.0 1.2E-32 4E-37 282.4 14.1 220 368-602 9-266 (310)
40 2r5t_A Serine/threonine-protei 100.0 2.1E-33 7.1E-38 295.5 8.4 217 368-602 37-280 (373)
41 3v47_A TOLL-like receptor 5B a 100.0 2.1E-31 7.3E-36 287.7 24.2 234 125-360 75-392 (455)
42 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.7E-33 1.6E-37 290.6 10.6 214 368-602 40-279 (350)
43 4eqm_A Protein kinase; transfe 100.0 1.8E-33 6.3E-38 286.4 6.9 225 368-602 10-258 (294)
44 4fr4_A YANK1, serine/threonine 100.0 8.3E-33 2.8E-37 291.7 12.0 222 368-602 14-261 (384)
45 3fe3_A MAP/microtubule affinit 100.0 6.3E-33 2.1E-37 287.0 10.8 219 367-602 13-255 (328)
46 4aw2_A Serine/threonine-protei 100.0 1.1E-33 3.9E-38 303.2 5.4 218 368-601 73-326 (437)
47 2vd5_A DMPK protein; serine/th 100.0 1.8E-33 6.3E-38 299.5 6.7 218 368-601 60-314 (412)
48 3c4z_A Rhodopsin kinase; Ser/T 100.0 7.3E-33 2.5E-37 303.7 11.3 224 368-602 184-434 (543)
49 3q4u_A Activin receptor type-1 100.0 1.4E-32 4.9E-37 280.0 11.0 221 368-602 7-286 (301)
50 2zv2_A Calcium/calmodulin-depe 100.0 2.8E-32 9.7E-37 277.9 13.2 222 368-602 12-283 (298)
51 4ejn_A RAC-alpha serine/threon 100.0 3.7E-33 1.3E-37 301.1 7.0 217 368-602 147-390 (446)
52 2psq_A Fibroblast growth facto 100.0 2.3E-32 7.7E-37 287.7 12.8 219 368-602 80-348 (370)
53 3niz_A Rhodanese family protei 100.0 5.3E-32 1.8E-36 277.9 14.9 181 368-552 20-223 (311)
54 3a62_A Ribosomal protein S6 ki 100.0 1.2E-32 4.2E-37 284.7 10.2 220 368-602 16-262 (327)
55 3zgw_A Maternal embryonic leuc 100.0 9.5E-33 3.2E-37 287.7 9.1 218 368-602 9-251 (347)
56 3soc_A Activin receptor type-2 100.0 2.1E-32 7.3E-37 282.2 11.0 227 368-602 23-302 (322)
57 3tki_A Serine/threonine-protei 100.0 3.2E-32 1.1E-36 281.1 12.2 221 365-602 3-252 (323)
58 2c30_A Serine/threonine-protei 100.0 3.5E-32 1.2E-36 280.6 12.1 218 370-602 46-285 (321)
59 2izr_A Casein kinase I isoform 100.0 1E-32 3.4E-37 285.6 7.6 220 368-602 8-265 (330)
60 3v8s_A RHO-associated protein 100.0 7.7E-33 2.6E-37 294.5 6.7 221 368-601 68-317 (410)
61 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3E-32 1E-36 286.2 11.0 175 368-551 64-287 (365)
62 4hgt_A Casein kinase I isoform 100.0 1.3E-32 4.3E-37 279.5 7.8 222 367-602 7-264 (296)
63 1csn_A Casein kinase-1; phosph 100.0 1.3E-32 4.5E-37 279.8 7.9 221 368-602 9-267 (298)
64 3kn6_A Ribosomal protein S6 ki 100.0 1.7E-32 5.9E-37 283.4 8.6 218 375-602 17-261 (325)
65 3ork_A Serine/threonine protei 100.0 4.9E-33 1.7E-37 285.5 4.4 224 368-602 11-264 (311)
66 3h4j_B AMPK kdaid, SNF1-like p 100.0 4.8E-32 1.7E-36 281.1 11.8 217 368-602 8-249 (336)
67 3q60_A ROP5B; pseudokinase, tr 100.0 2.7E-32 9.1E-37 287.2 9.9 226 368-602 61-343 (371)
68 3lb7_A RAF proto-oncogene seri 100.0 3.6E-32 1.2E-36 278.7 10.3 222 368-602 35-284 (307)
69 3uzp_A CKI-delta, CKID, casein 100.0 1.6E-32 5.6E-37 278.9 7.7 221 368-602 8-264 (296)
70 3dbq_A Dual specificity protei 100.0 4.4E-32 1.5E-36 282.4 11.0 221 368-602 8-264 (343)
71 3soa_A Calcium/calmodulin-depe 100.0 5.2E-32 1.8E-36 291.2 11.9 223 368-602 10-258 (444)
72 3ttj_A Mitogen-activated prote 100.0 1.9E-31 6.6E-36 288.8 16.3 181 368-553 61-267 (464)
73 4euu_A Serine/threonine-protei 100.0 6.2E-32 2.1E-36 278.2 11.9 225 368-602 8-293 (319)
74 2pmi_A Negative RE, cyclin-dep 100.0 1.2E-31 4E-36 276.1 13.6 180 368-552 4-212 (317)
75 3poz_A Epidermal growth factor 100.0 2.4E-32 8.3E-37 282.5 8.4 219 368-602 14-262 (327)
76 1tki_A Titin; serine kinase, m 100.0 3.5E-32 1.2E-36 280.6 9.5 219 368-602 4-248 (321)
77 3vhe_A Vascular endothelial gr 100.0 3.1E-32 1.1E-36 284.9 9.0 220 368-602 21-339 (359)
78 3kul_A Ephrin type-A receptor 100.0 5.5E-32 1.9E-36 279.6 10.6 217 368-602 48-297 (325)
79 3cbl_A C-FES, proto-oncogene t 100.0 4.1E-32 1.4E-36 286.5 9.7 217 368-602 113-358 (377)
80 1ob3_A PFPK5, cell division co 100.0 3.5E-32 1.2E-36 275.9 8.7 180 369-552 2-204 (288)
81 2yab_A Death-associated protei 100.0 5.4E-32 1.9E-36 283.5 10.4 224 367-602 10-263 (361)
82 3dzo_A Rhoptry kinase domain; 100.0 2.6E-32 9E-37 291.4 8.0 212 368-602 77-354 (413)
83 3cok_A Serine/threonine-protei 100.0 5.8E-32 2E-36 272.5 10.1 218 368-602 10-253 (278)
84 2zmd_A Dual specificity protei 100.0 1E-31 3.5E-36 284.7 12.3 220 369-602 56-311 (390)
85 2qol_A Ephrin receptor; recept 100.0 3.8E-32 1.3E-36 286.2 9.0 217 368-602 44-293 (373)
86 3c0i_A Peripheral plasma membr 100.0 3E-32 1E-36 284.7 8.1 223 368-602 23-277 (351)
87 2y94_A 5'-AMP-activated protei 100.0 1.2E-31 4E-36 290.5 12.9 219 368-602 15-257 (476)
88 3ugc_A Tyrosine-protein kinase 100.0 2.7E-32 9.1E-37 277.6 7.2 226 368-602 9-275 (295)
89 2acx_A G protein-coupled recep 100.0 4.9E-32 1.7E-36 298.0 9.7 220 368-602 183-430 (576)
90 2nru_A Interleukin-1 receptor- 100.0 3E-31 1E-35 271.2 14.8 221 373-602 35-290 (307)
91 3p1a_A MYT1 kinase, membrane-a 100.0 1.1E-31 3.7E-36 275.5 11.3 215 369-602 57-295 (311)
92 4f0f_A Serine/threonine-protei 100.0 2E-31 6.9E-36 269.8 12.9 221 368-602 18-273 (287)
93 2bdw_A Hypothetical protein K1 100.0 9.1E-32 3.1E-36 282.2 10.7 222 368-602 28-275 (362)
94 2z66_A Variable lymphocyte rec 100.0 8.6E-31 2.9E-35 268.0 17.5 247 89-356 5-265 (306)
95 2eue_A Carbon catabolite derep 100.0 1.5E-31 5.2E-36 269.1 11.7 219 368-602 12-253 (275)
96 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.1E-31 3.9E-36 268.8 10.5 217 368-602 7-248 (268)
97 1qcf_A Haematopoetic cell kina 100.0 5.5E-32 1.9E-36 292.5 8.6 216 368-602 187-428 (454)
98 4hcu_A Tyrosine-protein kinase 100.0 6.9E-32 2.4E-36 270.7 8.5 217 368-602 9-250 (269)
99 3sv0_A Casein kinase I-like; t 100.0 5.6E-32 1.9E-36 293.6 8.1 221 368-602 6-262 (483)
100 1u5q_A Serine/threonine protei 100.0 1.7E-31 5.6E-36 278.7 11.1 217 369-602 54-296 (348)
101 1rjb_A FL cytokine receptor; k 100.0 1.2E-31 4.2E-36 278.8 10.0 220 368-602 44-318 (344)
102 3o0g_A Cell division protein k 100.0 1.9E-31 6.5E-36 270.9 11.2 178 369-550 2-203 (292)
103 3qd2_B Eukaryotic translation 100.0 1.7E-31 5.7E-36 275.7 10.7 216 369-602 6-316 (332)
104 2x4f_A Myosin light chain kina 100.0 1.9E-31 6.5E-36 280.9 11.2 216 372-602 92-333 (373)
105 3op5_A Serine/threonine-protei 100.0 2.7E-32 9.2E-37 286.4 4.5 224 368-602 34-313 (364)
106 3l9p_A Anaplastic lymphoma kin 100.0 1.4E-31 4.7E-36 281.4 9.9 219 368-602 70-329 (367)
107 2eva_A TAK1 kinase - TAB1 chim 100.0 2.5E-31 8.4E-36 272.4 11.5 217 368-602 7-247 (307)
108 3gen_A Tyrosine-protein kinase 100.0 1.4E-31 4.8E-36 270.4 9.5 215 368-602 23-264 (283)
109 1luf_A Muscle-specific tyrosin 100.0 1.1E-31 3.6E-36 278.9 8.8 219 368-602 46-319 (343)
110 2rku_A Serine/threonine-protei 100.0 2.2E-31 7.6E-36 270.6 11.0 220 368-602 14-256 (294)
111 2y0a_A Death-associated protei 100.0 1.1E-31 3.7E-36 277.5 8.7 223 368-602 10-262 (326)
112 3g33_A Cell division protein k 100.0 1.3E-31 4.3E-36 274.4 9.1 181 368-552 8-222 (308)
113 3mdy_A Bone morphogenetic prot 100.0 3.1E-31 1.1E-35 274.5 11.9 218 368-602 36-315 (337)
114 3fdn_A Serine/threonine-protei 100.0 2.4E-31 8.2E-36 268.2 10.5 218 368-602 8-248 (279)
115 1kob_A Twitchin; kinase, intra 100.0 2.3E-31 7.9E-36 281.3 10.8 218 368-602 50-295 (387)
116 3kex_A Receptor tyrosine-prote 100.0 1.4E-31 4.8E-36 276.4 8.8 217 368-602 12-260 (325)
117 3tt0_A Basic fibroblast growth 100.0 2.2E-31 7.5E-36 281.4 10.3 219 368-602 68-336 (382)
118 2ft3_A Biglycan; proteoglycan, 100.0 1.9E-29 6.5E-34 261.2 24.7 255 89-352 31-307 (332)
119 3uc3_A Serine/threonine-protei 100.0 3.1E-31 1.1E-35 278.1 11.2 222 367-602 18-265 (361)
120 3i6u_A CDS1, serine/threonine- 100.0 3.5E-31 1.2E-35 283.3 11.8 221 368-602 134-390 (419)
121 3llt_A Serine/threonine kinase 100.0 5.2E-31 1.8E-35 275.9 12.7 175 368-552 34-262 (360)
122 2owb_A Serine/threonine-protei 100.0 2.8E-31 9.6E-36 275.4 10.5 218 368-602 40-282 (335)
123 2ivs_A Proto-oncogene tyrosine 100.0 2.8E-31 9.4E-36 272.1 10.3 219 368-602 22-295 (314)
124 3qup_A Tyrosine-protein kinase 100.0 2.1E-31 7.3E-36 274.5 9.4 220 368-602 22-282 (323)
125 3og7_A AKAP9-BRAF fusion prote 100.0 1.3E-31 4.3E-36 271.9 7.6 222 368-602 23-272 (289)
126 2w4o_A Calcium/calmodulin-depe 100.0 1.7E-31 5.8E-36 278.7 8.5 219 368-602 52-296 (349)
127 1nxk_A MAP kinase-activated pr 100.0 3.5E-31 1.2E-35 281.5 10.8 218 368-602 60-312 (400)
128 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.1E-31 7.2E-36 287.8 9.3 216 368-602 183-424 (452)
129 3dtc_A Mitogen-activated prote 100.0 2.2E-31 7.6E-36 267.1 8.8 219 368-602 6-257 (271)
130 2qr7_A Ribosomal protein S6 ki 100.0 1.6E-31 5.4E-36 278.1 8.0 217 368-602 21-268 (342)
131 1opk_A P150, C-ABL, proto-onco 100.0 2.7E-31 9.3E-36 290.1 10.0 216 368-602 219-462 (495)
132 3rp9_A Mitogen-activated prote 100.0 6.6E-31 2.3E-35 284.5 12.8 175 367-545 51-280 (458)
133 3hko_A Calcium/calmodulin-depe 100.0 4.4E-31 1.5E-35 274.6 10.6 224 368-602 25-321 (345)
134 3dls_A PAS domain-containing s 100.0 4.2E-31 1.4E-35 274.2 10.5 213 368-602 23-265 (335)
135 1t46_A HOMO sapiens V-KIT hard 100.0 3E-31 1E-35 271.8 9.2 220 368-602 22-291 (313)
136 3n9x_A Phosphotransferase; mal 100.0 1.5E-30 5.3E-35 279.4 15.1 183 364-550 21-253 (432)
137 4eut_A Serine/threonine-protei 100.0 3E-31 1E-35 281.7 9.3 225 368-602 8-293 (396)
138 3lxl_A Tyrosine-protein kinase 100.0 2.7E-31 9.4E-36 274.3 8.7 229 365-602 19-287 (327)
139 1mp8_A Focal adhesion kinase 1 100.0 3.8E-31 1.3E-35 267.2 9.6 219 368-602 14-260 (281)
140 1vzo_A Ribosomal protein S6 ki 100.0 1.3E-31 4.4E-36 280.3 6.3 221 368-602 53-307 (355)
141 3oz6_A Mitogen-activated prote 100.0 4.2E-31 1.4E-35 279.7 10.3 182 368-553 8-235 (388)
142 3g2f_A Bone morphogenetic prot 100.0 4.3E-31 1.5E-35 273.7 10.1 220 368-602 12-302 (336)
143 1k9a_A Carboxyl-terminal SRC k 100.0 5E-31 1.7E-35 284.7 10.9 211 368-602 192-429 (450)
144 3gni_B Strad alpha; kinase fol 100.0 1E-30 3.5E-35 276.9 12.9 183 366-552 22-240 (389)
145 4agu_A Cyclin-dependent kinase 100.0 3.5E-31 1.2E-35 271.3 9.0 181 369-553 3-207 (311)
146 1qpc_A LCK kinase; alpha beta 100.0 5.2E-31 1.8E-35 265.7 10.2 216 368-602 12-253 (279)
147 3mtl_A Cell division protein k 100.0 2.2E-31 7.7E-36 274.8 7.7 179 369-552 2-204 (324)
148 3byv_A Rhoptry kinase; malaria 100.0 1.4E-31 4.8E-36 282.3 6.2 212 368-602 72-350 (377)
149 2wqm_A Serine/threonine-protei 100.0 3.9E-31 1.3E-35 270.9 9.1 224 368-602 31-281 (310)
150 2vgo_A Serine/threonine-protei 100.0 6.1E-31 2.1E-35 266.0 10.4 218 368-602 13-253 (284)
151 2xrw_A Mitogen-activated prote 100.0 1.5E-30 5.2E-35 273.8 13.8 181 368-553 24-230 (371)
152 1xku_A Decorin; proteoglycan, 100.0 4.3E-29 1.5E-33 258.3 24.3 256 89-352 29-306 (330)
153 3kk8_A Calcium/calmodulin depe 100.0 8.9E-31 3.1E-35 264.5 11.2 222 368-602 5-252 (284)
154 2h34_A Serine/threonine-protei 100.0 3.9E-31 1.3E-35 271.1 8.7 223 368-602 33-279 (309)
155 2id5_A Lingo-1, leucine rich r 100.0 9.8E-30 3.3E-34 276.6 20.0 267 92-363 12-296 (477)
156 2y7j_A Phosphorylase B kinase 100.0 6.9E-31 2.4E-35 275.8 10.5 222 369-602 94-350 (365)
157 2xir_A Vascular endothelial gr 100.0 5E-31 1.7E-35 270.5 9.2 220 368-602 26-294 (316)
158 3gbz_A Kinase, CMGC CDK; ssgci 100.0 6.9E-31 2.4E-35 271.7 10.2 182 367-552 32-241 (329)
159 3gxj_A TGF-beta receptor type- 100.0 3.6E-32 1.2E-36 277.1 0.5 221 369-602 3-281 (303)
160 3mi9_A Cell division protein k 100.0 4.2E-30 1.4E-34 268.1 15.8 181 368-552 16-232 (351)
161 1u46_A ACK-1, activated CDC42 100.0 6.2E-31 2.1E-35 266.5 9.2 222 368-602 17-268 (291)
162 2pvf_A Fibroblast growth facto 100.0 1.1E-30 3.8E-35 270.7 11.3 219 368-602 34-302 (334)
163 3lzb_A Epidermal growth factor 100.0 3.5E-31 1.2E-35 273.8 7.5 219 368-602 14-262 (327)
164 2i1m_A Macrophage colony-stimu 100.0 8.1E-31 2.8E-35 271.3 10.2 220 368-602 45-310 (333)
165 2yex_A Serine/threonine-protei 100.0 2.6E-30 9E-35 259.8 13.6 218 368-602 6-252 (276)
166 2ac3_A MAP kinase-interacting 100.0 6.7E-31 2.3E-35 269.8 9.2 228 368-602 11-286 (316)
167 1cm8_A Phosphorylated MAP kina 100.0 2.6E-30 8.8E-35 271.7 13.8 179 368-553 24-230 (367)
168 2clq_A Mitogen-activated prote 100.0 1E-30 3.5E-35 265.5 10.2 218 370-602 23-269 (295)
169 2a2a_A Death-associated protei 100.0 6.8E-31 2.3E-35 270.7 8.9 223 368-602 11-263 (321)
170 3f3z_A Calcium/calmodulin-depe 100.0 8.3E-31 2.8E-35 263.9 9.1 219 368-602 8-252 (277)
171 3lxp_A Non-receptor tyrosine-p 100.0 6.7E-31 2.3E-35 270.5 8.6 224 371-602 33-294 (318)
172 1ua2_A CAK, cell division prot 100.0 9.6E-31 3.3E-35 272.6 9.7 182 368-552 9-216 (346)
173 1j1b_A Glycogen synthase kinas 100.0 2.1E-30 7.2E-35 277.3 12.6 174 368-552 53-260 (420)
174 3kfa_A Tyrosine-protein kinase 100.0 9.1E-31 3.1E-35 265.0 9.2 217 368-602 12-255 (288)
175 1u59_A Tyrosine-protein kinase 100.0 1.4E-30 4.8E-35 263.8 10.6 218 369-602 9-256 (287)
176 4e5w_A Tyrosine-protein kinase 100.0 3.9E-31 1.3E-35 269.6 6.5 227 368-602 20-286 (302)
177 3lm5_A Serine/threonine-protei 100.0 7.7E-31 2.6E-35 271.2 8.7 219 370-602 29-278 (327)
178 3cc6_A Protein tyrosine kinase 100.0 1.2E-30 4E-35 263.5 9.7 219 368-602 11-257 (281)
179 2vx3_A Dual specificity tyrosi 100.0 3.7E-30 1.3E-34 271.9 13.9 176 368-552 53-261 (382)
180 3t9t_A Tyrosine-protein kinase 100.0 7.6E-31 2.6E-35 262.4 8.0 217 368-602 7-248 (267)
181 3a7i_A MST3 kinase, serine/thr 100.0 1.5E-30 5.2E-35 265.6 10.4 216 368-602 21-261 (303)
182 2fst_X Mitogen-activated prote 100.0 1.6E-30 5.4E-35 273.2 10.7 179 368-553 28-234 (367)
183 4aaa_A Cyclin-dependent kinase 100.0 1.6E-30 5.5E-35 269.1 10.6 182 368-553 24-229 (331)
184 2w5a_A Serine/threonine-protei 100.0 3.9E-31 1.3E-35 266.4 5.7 220 368-602 5-258 (279)
185 2z80_A TOLL-like receptor 2, v 100.0 4.1E-30 1.4E-34 268.6 13.5 252 87-356 26-318 (353)
186 1p4o_A Insulin-like growth fac 100.0 6.3E-31 2.1E-35 270.7 7.2 219 368-602 24-283 (322)
187 3v47_A TOLL-like receptor 5B a 100.0 3.1E-29 1.1E-33 270.7 20.8 274 87-365 4-373 (455)
188 3kmu_A ILK, integrin-linked ki 100.0 1.1E-30 3.7E-35 261.6 8.7 214 368-602 9-254 (271)
189 3pls_A Macrophage-stimulating 100.0 2.1E-30 7.3E-35 263.5 10.7 218 370-602 22-271 (298)
190 3kvw_A DYRK2, dual specificity 100.0 3.9E-30 1.3E-34 276.0 13.2 175 368-552 96-302 (429)
191 1wak_A Serine/threonine-protei 100.0 8.4E-30 2.9E-34 269.8 15.5 175 368-552 36-296 (397)
192 3c1x_A Hepatocyte growth facto 100.0 9E-31 3.1E-35 275.6 8.0 218 369-602 89-339 (373)
193 3brb_A Proto-oncogene tyrosine 100.0 2.6E-30 8.9E-35 265.1 10.7 220 368-602 33-292 (313)
194 2h8h_A Proto-oncogene tyrosine 100.0 6.5E-31 2.2E-35 289.8 6.6 216 368-602 266-507 (535)
195 3nyv_A Calmodulin-domain prote 100.0 5.9E-31 2E-35 286.9 6.2 222 368-602 25-272 (484)
196 1byg_A CSK, protein (C-termina 100.0 1.9E-30 6.6E-35 261.5 9.4 212 368-602 20-257 (278)
197 2ozo_A Tyrosine-protein kinase 100.0 2.3E-30 7.9E-35 289.7 10.8 209 376-602 343-582 (613)
198 1t4h_A Serine/threonine-protei 100.0 4.7E-30 1.6E-34 260.2 12.0 219 368-602 25-273 (290)
199 2h6d_A 5'-AMP-activated protei 100.0 1.3E-30 4.3E-35 262.3 7.6 219 368-602 10-252 (276)
200 3qyz_A Mitogen-activated prote 100.0 1.2E-29 4.1E-34 266.2 15.3 180 368-552 26-235 (364)
201 3ll6_A Cyclin G-associated kin 100.0 2.5E-30 8.4E-35 267.5 9.8 215 368-602 27-292 (337)
202 2v62_A Serine/threonine-protei 100.0 1.8E-30 6.3E-35 270.4 8.8 229 368-602 36-312 (345)
203 2ycf_A Serine/threonine-protei 100.0 2E-30 6.9E-35 267.2 9.0 223 369-602 10-265 (322)
204 3com_A Serine/threonine-protei 100.0 4.4E-30 1.5E-34 263.5 11.4 217 368-602 28-269 (314)
205 3f66_A Hepatocyte growth facto 100.0 4.2E-30 1.4E-34 261.6 11.1 219 368-602 24-275 (298)
206 1mqb_A Ephrin type-A receptor 100.0 2.8E-30 9.6E-35 267.7 9.9 219 368-602 43-293 (333)
207 3fme_A Dual specificity mitoge 100.0 3.6E-30 1.2E-34 260.8 10.2 221 368-602 6-257 (290)
208 4fcg_A Uncharacterized protein 100.0 3.8E-29 1.3E-33 258.6 18.1 209 153-365 79-303 (328)
209 3cek_A Dual specificity protei 100.0 4.6E-30 1.6E-34 263.4 11.1 221 368-602 27-283 (313)
210 1z57_A Dual specificity protei 100.0 8.4E-30 2.9E-34 263.5 13.1 174 368-552 13-237 (339)
211 2b9h_A MAP kinase FUS3, mitoge 100.0 9.6E-30 3.3E-34 265.3 13.5 182 367-553 9-227 (353)
212 4e7w_A Glycogen synthase kinas 100.0 4.1E-30 1.4E-34 272.7 10.8 175 368-553 39-246 (394)
213 3eb0_A Putative uncharacterize 100.0 7.5E-30 2.6E-34 269.7 12.8 174 368-552 6-245 (383)
214 4exu_A Mitogen-activated prote 100.0 4.9E-30 1.7E-34 270.0 11.2 178 368-552 41-245 (371)
215 2a19_B Interferon-induced, dou 100.0 3.4E-30 1.2E-34 260.0 9.6 206 369-602 11-258 (284)
216 2jam_A Calcium/calmodulin-depe 100.0 2.9E-30 1E-34 263.7 9.2 217 368-602 8-252 (304)
217 3rgf_A Cyclin-dependent kinase 100.0 3.1E-30 1.1E-34 274.7 9.7 176 369-552 20-239 (405)
218 2w1i_A JAK2; chromosomal rearr 100.0 1.7E-30 6E-35 268.3 7.4 226 368-602 40-306 (326)
219 3mwu_A Calmodulin-domain prote 100.0 2.7E-30 9.3E-35 281.8 9.3 221 368-602 21-267 (486)
220 2x7f_A TRAF2 and NCK-interacti 100.0 2.7E-30 9.3E-35 266.4 8.8 218 368-602 23-277 (326)
221 3nsz_A CK II alpha, casein kin 100.0 7.9E-30 2.7E-34 263.4 12.3 174 368-551 35-233 (330)
222 2r3i_A Cell division protein k 100.0 5.1E-30 1.8E-34 260.9 10.7 181 369-553 3-208 (299)
223 1phk_A Phosphorylase kinase; g 100.0 6.5E-30 2.2E-34 260.0 11.4 223 368-602 16-274 (298)
224 3bhy_A Death-associated protei 100.0 2.2E-30 7.5E-35 261.5 7.8 222 369-602 5-256 (283)
225 2wtk_C Serine/threonine-protei 100.0 1.3E-29 4.6E-34 258.6 13.7 219 369-602 5-254 (305)
226 2jii_A Serine/threonine-protei 100.0 1.4E-30 4.9E-35 271.9 6.4 220 368-602 41-320 (352)
227 2pml_X PFPK7, Ser/Thr protein 100.0 3.8E-30 1.3E-34 267.8 9.6 178 368-552 30-255 (348)
228 1xbb_A Tyrosine-protein kinase 100.0 3.2E-30 1.1E-34 261.7 8.7 220 368-602 15-263 (291)
229 4fl3_A Tyrosine-protein kinase 100.0 2.4E-30 8.3E-35 290.3 8.5 213 375-602 375-615 (635)
230 1x8b_A WEE1HU, WEE1-like prote 100.0 3.9E-30 1.3E-34 259.7 8.8 213 368-602 10-270 (289)
231 2j7t_A Serine/threonine-protei 100.0 2.9E-30 1E-34 263.1 7.9 220 367-602 17-266 (302)
232 4fvq_A Tyrosine-protein kinase 100.0 2.4E-30 8.3E-35 262.0 7.0 208 368-602 7-259 (289)
233 3an0_A Dual specificity mitoge 100.0 2.5E-30 8.4E-35 268.6 7.1 220 368-602 50-301 (340)
234 3is5_A Calcium-dependent prote 100.0 2.8E-30 9.6E-35 261.5 7.3 219 368-602 21-269 (285)
235 3eqc_A Dual specificity mitoge 100.0 2.8E-30 9.7E-35 270.4 7.6 178 368-552 32-233 (360)
236 2buj_A Serine/threonine-protei 100.0 2.2E-30 7.6E-35 266.0 6.6 220 368-602 28-290 (317)
237 2yfx_A Tyrosine-protein kinase 100.0 6.4E-30 2.2E-34 264.1 9.7 219 368-602 29-288 (327)
238 2vwi_A Serine/threonine-protei 100.0 4.9E-30 1.7E-34 261.3 8.5 223 368-602 14-278 (303)
239 1b6c_B TGF-B superfamily recep 100.0 7.5E-30 2.6E-34 264.8 10.1 226 368-602 41-320 (342)
240 3zyi_A Leucine-rich repeat-con 100.0 2.5E-28 8.7E-33 263.7 22.4 224 127-354 73-305 (452)
241 3coi_A Mitogen-activated prote 100.0 2.6E-29 8.8E-34 262.4 14.0 178 368-552 23-227 (353)
242 2eu9_A Dual specificity protei 100.0 1.4E-29 4.7E-34 263.8 11.9 174 368-552 18-242 (355)
243 3q5i_A Protein kinase; CDPK, m 100.0 6.3E-30 2.2E-34 280.1 9.8 222 368-602 35-292 (504)
244 1fvr_A Tyrosine-protein kinase 100.0 6.1E-30 2.1E-34 264.2 8.9 218 368-602 24-284 (327)
245 3lij_A Calcium/calmodulin depe 100.0 7E-30 2.4E-34 279.1 9.8 221 368-602 36-282 (494)
246 3e3p_A Protein kinase, putativ 100.0 1.4E-29 4.9E-34 264.8 11.6 179 368-552 22-235 (360)
247 4eco_A Uncharacterized protein 100.0 1.1E-29 3.7E-34 286.0 11.4 224 131-360 83-423 (636)
248 3oja_B Anopheles plasmodium-re 100.0 1.1E-28 3.8E-33 275.9 19.4 232 120-359 66-344 (597)
249 3pg1_A Mitogen-activated prote 100.0 2E-29 6.7E-34 264.1 12.4 181 368-552 21-237 (362)
250 1q8y_A SR protein kinase; tran 100.0 5.3E-29 1.8E-33 261.6 15.3 175 368-552 18-238 (373)
251 3fhr_A MAP kinase-activated pr 100.0 6.7E-30 2.3E-34 265.2 8.3 223 366-602 25-278 (336)
252 2o6q_A Variable lymphocyte rec 100.0 4.3E-28 1.5E-32 243.6 20.9 183 173-355 38-221 (270)
253 2i6l_A Mitogen-activated prote 100.0 1.6E-29 5.6E-34 259.3 9.4 180 368-553 10-229 (320)
254 1blx_A Cyclin-dependent kinase 100.0 2.6E-29 8.9E-34 259.0 10.8 180 368-552 10-222 (326)
255 3a99_A Proto-oncogene serine/t 100.0 5.2E-30 1.8E-34 264.1 5.5 210 368-602 42-284 (320)
256 1ozn_A Reticulon 4 receptor; N 100.0 3.7E-28 1.3E-32 245.9 18.8 228 128-358 31-267 (285)
257 2id5_A Lingo-1, leucine rich r 100.0 4.3E-28 1.5E-32 263.6 20.4 254 102-360 56-317 (477)
258 3qa8_A MGC80376 protein; kinas 100.0 7.9E-29 2.7E-33 275.4 14.8 178 368-551 13-225 (676)
259 3zyj_A Leucine-rich repeat-con 100.0 7.4E-28 2.5E-32 259.2 21.9 225 125-353 60-293 (440)
260 3o6n_A APL1; leucine-rich repe 100.0 4E-28 1.4E-32 256.9 19.2 221 125-352 65-308 (390)
261 3t6q_A CD180 antigen; protein- 100.0 8.1E-28 2.8E-32 269.2 22.6 256 103-364 255-525 (606)
262 1ozn_A Reticulon 4 receptor; N 100.0 7.7E-28 2.6E-32 243.6 20.2 210 145-356 24-242 (285)
263 3aln_A Dual specificity mitoge 100.0 2E-29 6.7E-34 260.3 8.0 220 368-602 21-276 (327)
264 3j0a_A TOLL-like receptor 5; m 100.0 9.6E-28 3.3E-32 278.8 23.0 264 90-359 13-358 (844)
265 1zy4_A Serine/threonine-protei 100.0 2.5E-29 8.4E-34 255.8 7.3 216 368-602 5-274 (303)
266 2j0j_A Focal adhesion kinase 1 100.0 4.9E-29 1.7E-33 280.7 10.0 219 368-602 389-635 (656)
267 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.4E-27 4.9E-32 265.0 21.3 259 93-359 43-448 (562)
268 3t6q_A CD180 antigen; protein- 100.0 2.4E-27 8.3E-32 265.4 23.1 251 102-358 33-344 (606)
269 2y4i_B KSR2, HKSR2, kinase sup 100.0 2E-29 6.8E-34 259.0 5.6 216 368-602 32-286 (319)
270 2iwi_A Serine/threonine-protei 100.0 1.1E-28 3.7E-33 253.0 10.9 212 368-602 30-274 (312)
271 3vq2_A TLR4, TOLL-like recepto 100.0 1.9E-27 6.6E-32 266.2 22.1 125 240-365 373-499 (606)
272 2wei_A Calmodulin-domain prote 100.0 3.3E-29 1.1E-33 253.7 6.8 221 368-602 21-267 (287)
273 2dyl_A Dual specificity mitoge 100.0 1.6E-28 5.6E-33 252.0 11.5 221 368-602 24-274 (318)
274 2z81_A CD282 antigen, TOLL-lik 100.0 2.5E-28 8.7E-33 269.9 13.7 262 90-359 3-406 (549)
275 2z66_A Variable lymphocyte rec 100.0 8.5E-28 2.9E-32 245.8 16.3 254 102-360 28-295 (306)
276 3p23_A Serine/threonine-protei 99.9 1.6E-28 5.5E-33 263.4 11.1 217 368-602 23-274 (432)
277 2z7x_B TOLL-like receptor 1, v 99.9 1.7E-27 5.7E-32 261.8 18.8 245 102-356 21-391 (520)
278 1ziw_A TOLL-like receptor 3; i 99.9 2.7E-27 9.4E-32 268.6 20.5 241 102-347 25-304 (680)
279 2rio_A Serine/threonine-protei 99.9 3.3E-28 1.1E-32 261.4 12.1 216 369-602 15-286 (434)
280 3oja_A Leucine-rich immune mol 99.9 9.1E-29 3.1E-33 269.5 7.4 308 103-437 35-348 (487)
281 2ft3_A Biglycan; proteoglycan, 99.9 1.3E-26 4.6E-31 239.8 22.4 240 104-359 35-284 (332)
282 1xku_A Decorin; proteoglycan, 99.9 2.9E-26 1E-30 236.9 24.1 241 104-359 33-283 (330)
283 4ecn_A Leucine-rich repeat pro 99.9 1.3E-26 4.3E-31 266.8 22.9 246 102-358 448-746 (876)
284 3vq2_A TLR4, TOLL-like recepto 99.9 5E-27 1.7E-31 262.8 17.7 246 103-360 286-541 (606)
285 1wwl_A Monocyte differentiatio 99.9 4.4E-28 1.5E-32 248.8 8.3 195 153-353 93-310 (312)
286 4g8a_A TOLL-like receptor 4; l 99.9 2.2E-26 7.5E-31 258.1 22.9 127 103-234 53-187 (635)
287 1wwl_A Monocyte differentiatio 99.9 1.9E-28 6.4E-33 251.6 5.5 221 126-357 40-291 (312)
288 3j0a_A TOLL-like receptor 5; m 99.9 1.4E-26 4.8E-31 269.0 21.7 249 102-354 48-377 (844)
289 2z62_A TOLL-like receptor 4, v 99.9 9.3E-27 3.2E-31 234.4 17.5 208 146-356 21-241 (276)
290 3rfs_A Internalin B, repeat mo 99.9 2.6E-26 9E-31 230.8 20.2 204 150-362 36-245 (272)
291 1p9a_G Platelet glycoprotein I 99.9 2.3E-26 7.9E-31 233.5 19.9 202 150-354 5-210 (290)
292 2pzi_A Probable serine/threoni 99.9 6.9E-28 2.4E-32 273.4 9.6 206 368-602 79-311 (681)
293 3zyi_A Leucine-rich repeat-con 99.9 3.2E-26 1.1E-30 247.3 21.1 213 145-361 67-288 (452)
294 3o6n_A APL1; leucine-rich repe 99.9 2.5E-26 8.4E-31 243.2 19.8 222 124-356 88-335 (390)
295 3oja_B Anopheles plasmodium-re 99.9 1.8E-26 6.2E-31 257.9 19.5 224 124-355 94-361 (597)
296 2z63_A TOLL-like receptor 4, v 99.9 5.6E-26 1.9E-30 252.1 23.0 121 243-364 373-495 (570)
297 3zyj_A Leucine-rich repeat-con 99.9 6.3E-26 2.2E-30 244.1 22.2 215 144-362 55-278 (440)
298 1ziw_A TOLL-like receptor 3; i 99.9 6.4E-26 2.2E-30 257.3 22.6 234 124-359 324-580 (680)
299 2z7x_B TOLL-like receptor 1, v 99.9 1.8E-26 6.2E-31 253.5 17.4 229 127-364 19-375 (520)
300 3uqc_A Probable conserved tran 99.9 2.8E-27 9.7E-32 239.7 10.1 199 369-602 31-250 (286)
301 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 3.3E-26 1.1E-30 254.0 18.8 241 105-358 34-422 (562)
302 2vuw_A Serine/threonine-protei 99.9 1.4E-27 4.7E-32 247.6 6.1 214 368-600 19-324 (336)
303 3m2w_A MAP kinase-activated pr 99.9 1E-26 3.5E-31 237.0 11.1 197 368-602 16-247 (299)
304 2z63_A TOLL-like receptor 4, v 99.9 4.2E-26 1.4E-30 253.1 15.6 227 125-356 278-535 (570)
305 3oja_A Leucine-rich immune mol 99.9 1.1E-26 3.8E-31 253.1 10.3 219 127-359 32-258 (487)
306 3bz5_A Internalin-J, INLJ; leu 99.9 6.4E-25 2.2E-29 237.1 23.8 193 151-358 102-305 (457)
307 4fmz_A Internalin; leucine ric 99.9 4.8E-25 1.7E-29 229.2 21.4 235 102-356 88-328 (347)
308 2z80_A TOLL-like receptor 2, v 99.9 1.5E-26 5.3E-31 241.4 10.0 216 140-358 39-295 (353)
309 3o53_A Protein LRIM1, AGAP0063 99.9 1.3E-26 4.4E-31 238.4 7.8 223 125-358 54-282 (317)
310 3bz5_A Internalin-J, INLJ; leu 99.9 6.6E-25 2.3E-29 237.0 20.8 230 102-358 42-283 (457)
311 4fmz_A Internalin; leucine ric 99.9 1.2E-24 4.3E-29 226.1 22.1 241 102-363 66-311 (347)
312 2z62_A TOLL-like receptor 4, v 99.9 4.4E-25 1.5E-29 222.2 18.0 201 129-332 28-241 (276)
313 3rfs_A Internalin B, repeat mo 99.9 1.8E-25 6.3E-30 224.6 14.3 203 128-341 40-248 (272)
314 3m19_A Variable lymphocyte rec 99.9 6.3E-25 2.2E-29 218.0 17.9 158 173-330 36-194 (251)
315 4g8a_A TOLL-like receptor 4; l 99.9 1.4E-24 4.7E-29 243.5 22.5 128 129-258 52-188 (635)
316 3o53_A Protein LRIM1, AGAP0063 99.9 6.4E-26 2.2E-30 233.2 9.9 220 126-359 31-258 (317)
317 2z81_A CD282 antigen, TOLL-lik 99.9 1.6E-25 5.3E-30 247.6 12.9 184 120-305 17-210 (549)
318 1o6v_A Internalin A; bacterial 99.9 1.9E-24 6.4E-29 234.3 21.0 193 151-356 173-370 (466)
319 1o6v_A Internalin A; bacterial 99.9 2.2E-24 7.6E-29 233.7 21.3 190 151-353 195-389 (466)
320 4glp_A Monocyte differentiatio 99.9 3.2E-24 1.1E-28 219.8 18.4 194 156-353 65-286 (310)
321 3g06_A SSPH2 (leucine-rich rep 99.9 2.4E-24 8.1E-29 240.1 17.6 244 87-360 18-305 (622)
322 3m19_A Variable lymphocyte rec 99.9 6.9E-24 2.4E-28 210.5 19.0 181 173-356 15-196 (251)
323 1h6u_A Internalin H; cell adhe 99.9 3.3E-24 1.1E-28 219.5 16.7 189 152-353 38-231 (308)
324 2xwt_C Thyrotropin receptor; s 99.9 1.8E-24 6.2E-29 212.9 13.8 189 156-349 32-236 (239)
325 1jl5_A Outer protein YOPM; leu 99.9 1.7E-23 5.8E-28 225.8 22.6 212 129-362 131-382 (454)
326 4glp_A Monocyte differentiatio 99.9 1.3E-24 4.3E-29 222.8 13.1 195 153-353 89-308 (310)
327 1p9a_G Platelet glycoprotein I 99.9 2E-23 6.7E-28 211.9 19.9 196 126-330 7-210 (290)
328 1jl5_A Outer protein YOPM; leu 99.9 7.6E-24 2.6E-28 228.5 17.0 225 102-353 11-251 (454)
329 2o6q_A Variable lymphocyte rec 99.9 5.4E-23 1.9E-27 206.3 21.4 184 174-360 18-202 (270)
330 2ca6_A RAN GTPase-activating p 99.9 8E-26 2.7E-30 239.0 -0.3 230 125-356 28-320 (386)
331 2ast_B S-phase kinase-associat 99.9 1.8E-25 6.2E-30 231.3 2.3 257 89-359 35-313 (336)
332 1h6u_A Internalin H; cell adhe 99.9 2.6E-23 8.9E-28 212.9 16.0 188 128-330 40-232 (308)
333 3cvr_A Invasion plasmid antige 99.9 6.9E-24 2.4E-28 233.6 11.2 201 87-340 39-255 (571)
334 2xwt_C Thyrotropin receptor; s 99.9 1.4E-23 4.7E-28 206.6 10.9 189 171-362 30-228 (239)
335 2o6s_A Variable lymphocyte rec 99.9 1.3E-22 4.6E-27 195.1 15.1 176 176-361 11-187 (208)
336 3cvr_A Invasion plasmid antige 99.9 1.9E-22 6.6E-27 222.1 17.7 183 156-362 60-253 (571)
337 2o6s_A Variable lymphocyte rec 99.9 7.1E-22 2.4E-26 190.0 17.4 176 158-340 10-190 (208)
338 3goz_A Leucine-rich repeat-con 99.9 3E-23 1E-27 217.3 4.5 227 129-357 22-302 (362)
339 3g06_A SSPH2 (leucine-rich rep 99.9 3.6E-21 1.2E-25 214.5 21.3 209 130-364 41-285 (622)
340 4azs_A Methyltransferase WBDD; 99.9 8.6E-24 2.9E-28 233.8 -1.1 162 377-548 242-437 (569)
341 2ca6_A RAN GTPase-activating p 99.9 7.7E-24 2.6E-28 223.7 -1.5 218 142-359 19-298 (386)
342 1m9s_A Internalin B; cell inva 99.9 1.5E-21 5.2E-26 217.1 15.7 225 151-389 39-281 (605)
343 1h6t_A Internalin B; cell adhe 99.9 2.2E-21 7.7E-26 196.8 14.7 170 171-353 45-214 (291)
344 2ast_B S-phase kinase-associat 99.9 5.6E-23 1.9E-27 212.5 2.1 202 148-349 61-282 (336)
345 3goz_A Leucine-rich repeat-con 99.9 8.2E-23 2.8E-27 214.0 1.9 217 140-356 7-270 (362)
346 3e6j_A Variable lymphocyte rec 99.8 1.1E-20 3.8E-25 184.7 16.2 136 172-308 40-176 (229)
347 1h6t_A Internalin B; cell adhe 99.8 5E-21 1.7E-25 194.2 13.9 173 151-334 42-219 (291)
348 2v70_A SLIT-2, SLIT homolog 2 99.8 8E-21 2.7E-25 184.6 14.7 153 200-355 15-169 (220)
349 1z7x_W Ribonuclease inhibitor; 99.8 3.2E-23 1.1E-27 223.8 -3.7 199 154-352 141-383 (461)
350 1m9s_A Internalin B; cell inva 99.8 8.2E-21 2.8E-25 211.2 15.4 188 156-356 22-214 (605)
351 4ay9_X Follicle-stimulating ho 99.8 1.8E-20 6.2E-25 195.2 16.1 172 129-304 30-215 (350)
352 2xot_A Amphoterin-induced prot 99.8 8.4E-21 2.9E-25 198.6 13.6 157 197-353 40-203 (361)
353 2v70_A SLIT-2, SLIT homolog 2 99.8 2.5E-20 8.4E-25 181.1 15.0 153 176-331 15-169 (220)
354 1z7x_W Ribonuclease inhibitor; 99.8 1.5E-22 5.1E-27 218.5 -1.6 226 130-357 86-359 (461)
355 2v9t_B SLIT homolog 2 protein 99.8 4E-20 1.4E-24 179.6 15.2 133 196-328 32-165 (220)
356 2v9t_B SLIT homolog 2 protein 99.8 4.1E-20 1.4E-24 179.5 15.3 153 199-354 14-167 (220)
357 2xot_A Amphoterin-induced prot 99.8 1.1E-20 3.8E-25 197.7 12.1 173 158-330 21-204 (361)
358 4b8c_D Glucose-repressible alc 99.8 1.8E-21 6.1E-26 221.6 6.0 236 87-353 159-405 (727)
359 3e6j_A Variable lymphocyte rec 99.8 1.4E-19 4.8E-24 176.9 17.3 153 175-331 22-175 (229)
360 4ezg_A Putative uncharacterize 99.8 3.2E-20 1.1E-24 176.9 12.2 155 192-353 40-195 (197)
361 4ay9_X Follicle-stimulating ho 99.8 6E-20 2.1E-24 191.3 13.8 199 145-346 22-233 (350)
362 1xeu_A Internalin C; cellular 99.8 3.2E-20 1.1E-24 185.5 9.5 166 153-330 17-187 (263)
363 1dce_A Protein (RAB geranylger 99.8 5.4E-22 1.8E-26 219.4 -5.1 181 172-358 349-552 (567)
364 1xeu_A Internalin C; cellular 99.8 3.5E-20 1.2E-24 185.1 8.2 167 174-354 21-187 (263)
365 3en9_A Glycoprotease, O-sialog 99.8 8E-21 2.8E-25 208.9 3.4 172 373-550 340-539 (540)
366 1dce_A Protein (RAB geranylger 99.8 6.5E-22 2.2E-26 218.7 -5.9 191 151-346 345-567 (567)
367 4ezg_A Putative uncharacterize 99.8 1.7E-19 5.9E-24 171.9 10.9 152 171-329 43-195 (197)
368 4b8c_D Glucose-repressible alc 99.8 4.9E-20 1.7E-24 209.8 6.4 176 157-349 193-369 (727)
369 1w8a_A SLIT protein; signaling 99.8 1.6E-18 5.4E-23 164.6 12.5 131 199-332 11-143 (192)
370 1w8a_A SLIT protein; signaling 99.8 1.5E-18 5E-23 164.8 12.0 132 223-356 11-143 (192)
371 2ell_A Acidic leucine-rich nuc 99.7 5.4E-18 1.8E-22 157.0 9.4 130 172-303 24-159 (168)
372 2ell_A Acidic leucine-rich nuc 99.7 1E-17 3.5E-22 155.1 11.0 137 195-333 23-164 (168)
373 1zar_A RIO2 kinase; serine kin 99.7 1.2E-18 4.1E-23 175.7 5.0 136 371-523 92-253 (282)
374 2o6r_A Variable lymphocyte rec 99.7 4.5E-17 1.5E-21 152.2 13.5 130 224-355 11-140 (177)
375 2wfh_A SLIT homolog 2 protein 99.7 5.6E-17 1.9E-21 154.0 14.2 128 199-329 13-140 (193)
376 2je0_A Acidic leucine-rich nuc 99.7 9E-18 3.1E-22 152.2 8.2 127 171-299 16-148 (149)
377 2wfh_A SLIT homolog 2 protein 99.7 4E-17 1.4E-21 155.0 12.4 130 223-355 13-142 (193)
378 2je0_A Acidic leucine-rich nuc 99.7 3.2E-17 1.1E-21 148.6 8.9 126 220-347 17-148 (149)
379 3ogk_B Coronatine-insensitive 99.7 1.1E-18 3.8E-23 194.3 -3.9 212 142-354 280-528 (592)
380 2o6r_A Variable lymphocyte rec 99.7 3.9E-16 1.3E-20 145.8 13.8 131 199-332 10-141 (177)
381 1ds9_A Outer arm dynein; leuci 99.7 4.5E-19 1.5E-23 169.1 -7.9 115 190-308 42-157 (198)
382 1ds9_A Outer arm dynein; leuci 99.7 3.7E-19 1.3E-23 169.8 -9.7 157 191-353 13-186 (198)
383 1a9n_A U2A', U2A'; complex (nu 99.6 4.9E-16 1.7E-20 145.0 8.7 132 216-352 15-153 (176)
384 3ogk_B Coronatine-insensitive 99.6 1.7E-17 5.7E-22 184.8 -3.0 194 127-323 110-326 (592)
385 1a9n_A U2A', U2A'; complex (nu 99.6 1E-15 3.6E-20 142.8 8.6 103 197-303 43-152 (176)
386 3sb4_A Hypothetical leucine ri 99.6 1.9E-15 6.4E-20 155.8 8.9 201 154-360 48-318 (329)
387 3g39_A Variable lymphocyte rec 99.6 1E-14 3.6E-19 135.3 12.3 107 222-330 11-117 (170)
388 3sb4_A Hypothetical leucine ri 99.6 1.3E-15 4.6E-20 156.9 6.9 222 154-384 24-319 (329)
389 2r9u_A Variable lymphocyte rec 99.5 2.5E-14 8.5E-19 133.3 12.4 106 223-330 15-120 (174)
390 1zth_A RIO1 serine protein kin 99.5 4.2E-15 1.4E-19 147.7 7.4 125 371-499 49-219 (258)
391 3g39_A Variable lymphocyte rec 99.5 3.3E-14 1.1E-18 131.8 11.6 110 244-356 10-119 (170)
392 2p1m_B Transport inhibitor res 99.5 8.6E-17 3E-21 179.0 -7.2 207 145-353 279-520 (594)
393 2r9u_A Variable lymphocyte rec 99.5 9.2E-14 3.2E-18 129.4 11.8 108 245-355 14-121 (174)
394 2p1m_B Transport inhibitor res 99.5 1.1E-15 3.9E-20 169.9 -3.5 123 127-252 103-244 (594)
395 4fdw_A Leucine rich hypothetic 99.4 9.9E-13 3.4E-17 139.0 16.3 233 116-359 120-365 (401)
396 4fdw_A Leucine rich hypothetic 99.4 1.8E-12 6.3E-17 136.9 17.3 218 129-359 113-342 (401)
397 2ifg_A High affinity nerve gro 99.4 3.4E-13 1.2E-17 139.7 11.3 103 225-329 13-117 (347)
398 3un9_A NLR family member X1; l 99.4 1.8E-15 6.1E-20 158.5 -6.1 164 172-335 72-259 (372)
399 3un9_A NLR family member X1; l 99.4 5.9E-15 2E-19 154.5 -2.5 160 154-313 71-261 (372)
400 4gyi_A RIO2 kinase; protein ki 99.4 2.3E-13 7.9E-18 141.4 6.2 117 371-499 97-265 (397)
401 2ifg_A High affinity nerve gro 99.3 1.6E-12 5.5E-17 134.6 9.2 103 176-281 12-117 (347)
402 2ra8_A Uncharacterized protein 99.0 7.4E-11 2.5E-15 122.5 1.3 78 171-251 138-227 (362)
403 3rw6_A Nuclear RNA export fact 99.0 1.2E-11 4E-16 122.4 -4.7 18 90-107 77-95 (267)
404 2ra8_A Uncharacterized protein 98.9 1.5E-10 5.2E-15 120.2 2.0 77 149-228 133-227 (362)
405 4fs7_A Uncharacterized protein 98.6 2.4E-07 8.1E-12 97.4 13.8 213 125-349 158-376 (394)
406 1io0_A Tropomodulin; LRR prote 98.6 1.7E-08 5.7E-13 94.6 3.8 110 146-255 27-163 (185)
407 4fs7_A Uncharacterized protein 98.6 2.9E-07 1E-11 96.7 13.7 221 120-352 128-355 (394)
408 1io0_A Tropomodulin; LRR prote 98.6 6.5E-09 2.2E-13 97.4 0.4 66 191-256 31-106 (185)
409 3rw6_A Nuclear RNA export fact 98.6 9.4E-09 3.2E-13 101.6 0.7 63 194-257 168-234 (267)
410 4gt6_A Cell surface protein; l 98.5 3.9E-06 1.3E-10 88.0 18.8 109 239-351 261-369 (394)
411 4gt6_A Cell surface protein; l 98.5 1.7E-06 5.9E-11 90.8 14.7 131 215-351 260-390 (394)
412 3tm0_A Aminoglycoside 3'-phosp 98.3 6.5E-07 2.2E-11 88.2 6.6 124 370-497 15-212 (263)
413 4h09_A Hypothetical leucine ri 98.3 1.6E-05 5.5E-10 82.7 17.0 106 239-347 236-341 (379)
414 1nd4_A Aminoglycoside 3'-phosp 98.3 7.8E-07 2.7E-11 87.2 6.4 122 371-498 22-214 (264)
415 3sg8_A APH(2'')-ID; antibiotic 98.2 2.7E-07 9.1E-12 93.4 1.6 165 375-550 26-288 (304)
416 3dxp_A Putative acyl-COA dehyd 98.1 3.6E-06 1.2E-10 87.0 8.5 122 374-498 43-248 (359)
417 4h09_A Hypothetical leucine ri 98.0 7.5E-05 2.6E-09 77.6 16.2 185 148-338 151-355 (379)
418 3r70_A Aminoglycoside phosphot 97.6 5.4E-05 1.8E-09 76.9 6.4 167 372-547 40-296 (320)
419 3e4g_A ATP synthase subunit S, 97.5 2E-05 6.8E-10 72.3 1.5 79 174-253 63-149 (176)
420 3e4g_A ATP synthase subunit S, 97.5 1.7E-05 5.7E-10 72.8 0.1 82 244-325 62-149 (176)
421 1pgv_A TMD-1, tropomodulin TMD 97.4 9.4E-05 3.2E-09 69.1 4.2 81 149-229 35-135 (197)
422 1pgv_A TMD-1, tropomodulin TMD 97.4 3.7E-05 1.3E-09 71.8 0.9 39 218-256 68-111 (197)
423 3rfe_A Platelet glycoprotein I 97.1 0.00058 2E-08 59.4 5.6 34 270-303 34-67 (130)
424 3rfe_A Platelet glycoprotein I 96.8 0.002 6.8E-08 56.0 6.6 37 197-233 32-68 (130)
425 3tdw_A Gentamicin resistance p 96.7 0.0024 8.1E-08 64.2 7.2 116 375-499 25-225 (306)
426 3f7w_A Putative fructosamine-3 96.5 0.0014 4.8E-08 65.1 3.9 52 371-425 17-68 (288)
427 3d1u_A Putative fructosamine-3 96.3 0.002 6.9E-08 64.2 3.9 51 373-426 19-69 (288)
428 3ats_A Putative uncharacterize 96.0 0.0063 2.2E-07 62.2 5.9 32 467-498 221-252 (357)
429 3ovc_A Hygromycin-B 4-O-kinase 96.0 0.0069 2.3E-07 62.4 6.0 32 468-499 213-244 (362)
430 3dxq_A Choline/ethanolamine ki 96.0 0.015 5.2E-07 57.9 8.2 115 371-498 20-202 (301)
431 4gkh_A Aminoglycoside 3'-phosp 95.9 0.0071 2.4E-07 59.1 5.5 29 470-498 195-223 (272)
432 2olc_A MTR kinase, methylthior 95.4 0.018 6.2E-07 59.8 6.3 31 467-498 226-256 (397)
433 2q83_A YTAA protein; 2635576, 94.3 0.037 1.3E-06 55.8 5.1 32 467-498 221-252 (346)
434 2pyw_A Uncharacterized protein 92.0 0.1 3.5E-06 54.6 4.4 78 467-546 231-313 (420)
435 3csv_A Aminoglycoside phosphot 89.2 0.3 1E-05 49.0 4.7 33 467-499 182-218 (333)
436 2ppq_A HSK, HK, homoserine kin 86.9 0.14 4.9E-06 51.1 0.5 32 467-498 186-217 (322)
437 1zyl_A Hypothetical protein YI 86.1 0.46 1.6E-05 47.4 3.8 30 467-498 194-223 (328)
438 2yle_A Protein spire homolog 1 83.8 1.3 4.5E-05 41.5 5.4 103 429-549 34-136 (229)
439 2qg7_A Ethanolamine kinase PV0 82.6 0.76 2.6E-05 48.6 3.7 17 467-483 289-305 (458)
440 3i1a_A Spectinomycin phosphotr 81.9 0.8 2.7E-05 46.2 3.5 33 467-499 205-237 (339)
441 3c5i_A Choline kinase; choline 81.8 0.76 2.6E-05 46.8 3.3 31 467-498 211-241 (369)
442 1nw1_A Choline kinase (49.2 KD 76.5 0.76 2.6E-05 48.1 1.3 32 467-498 248-307 (429)
443 3feg_A Choline/ethanolamine ki 71.7 1.3 4.3E-05 45.6 1.5 32 467-498 219-254 (379)
444 3f2s_A CK, chetk-alpha, cholin 70.1 1.4 4.9E-05 45.5 1.5 31 467-497 243-279 (401)
445 4ann_A ESSB; membrane protein, 65.0 6.4 0.00022 36.6 4.7 81 443-550 78-158 (215)
446 3jr1_A Putative fructosamine-3 64.9 1.9 6.4E-05 43.0 1.1 27 467-494 206-232 (312)
447 3g15_A CK, chetk-alpha, cholin 62.7 2.7 9.1E-05 43.4 1.8 30 469-498 245-280 (401)
448 4ano_A ESSB; membrane protein, 60.3 6.5 0.00022 36.7 3.8 82 443-551 82-164 (219)
449 3mes_A Choline kinase; malaria 59.3 2.9 0.0001 43.5 1.4 31 467-498 261-291 (424)
450 2lz0_A Uncharacterized protein 31.8 56 0.0019 26.0 4.6 46 183-229 7-52 (100)
No 1
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1e-41 Score=346.52 Aligned_cols=217 Identities=22% Similarity=0.379 Sum_probs=172.0
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh---------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------------------- 425 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l--------------------- 425 (602)
.++|+..+.||+|+||+||+|+. .+|+.||||++.+.........+.+.+|++++..+
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46799999999999999999986 47999999999765544444556788999998444
Q ss_pred ----hcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 426 ----~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
++|+|.+++.. ...+++.++..|+.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 111 mEy~~gG~L~~~i~~---~~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 111 LSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp ECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 45555555432 345899999999999999999999 88999999999999999999999999999998754
Q ss_pred CC--CCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCCh
Q 047576 502 DS--SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDR 579 (602)
Q Consensus 502 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 579 (602)
+. ......+||+.|||||++.+..++.++||||+||++|||+||+.||...+ ....+..+....+..+.
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-------~~~~~~~i~~~~~~~p~-- 255 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN-------EGLIFAKIIKLEYDFPE-- 255 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHTCCCCCT--
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHcCCCCCCc--
Confidence 32 23345689999999999999999999999999999999999999997432 12233444444433221
Q ss_pred hhHHHHHHHHHHHhhccCcCCCC
Q 047576 580 KVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 580 ~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
. ....+.+++.+|+++||++
T Consensus 256 ~---~s~~~~dli~~lL~~dp~~ 275 (311)
T 4aw0_A 256 K---FFPKARDLVEKLLVLDATK 275 (311)
T ss_dssp T---CCHHHHHHHHHHSCSSGGG
T ss_pred c---cCHHHHHHHHHHccCCHhH
Confidence 1 1123788999999999974
No 2
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=344.65 Aligned_cols=219 Identities=26% Similarity=0.425 Sum_probs=161.8
Q ss_pred ccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHH------------------------Hh
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVL------------------------SQ 424 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il------------------------~~ 424 (602)
+++...+.||+|+||+||+|++.+ .||||+++..... ....+.|.+|+.++ ||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~-~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPT-PEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEc
Confidence 467778899999999999998753 5899998754332 23457899999988 66
Q ss_pred hhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCC-
Q 047576 425 MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS- 503 (602)
Q Consensus 425 l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~- 503 (602)
+++|+|.++++.. ...++|.++..|+.|||+||+||| +++||||||||+|||+|+++.+||+|||+|+......
T Consensus 113 ~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 113 CEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred CCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 6667776666542 235899999999999999999999 7899999999999999999999999999998764322
Q ss_pred -CCcccccccccccccccccc---CcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCC-CCCC
Q 047576 504 -SNQTLLAGSYGYIAPELAYT---MVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLP-PPVD 578 (602)
Q Consensus 504 -~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~-~~~~ 578 (602)
.......||+.|||||++.+ +.++.++|||||||++|||+||+.||..... ...+..++..... +...
T Consensus 188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~-------~~~~~~~~~~~~~~p~~~ 260 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN-------RDQIIFMVGRGYASPDLS 260 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-------HHHHHHHHHTTCCCCCST
T ss_pred ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh-------HHHHHHHHhcCCCCCCcc
Confidence 22344689999999999864 4589999999999999999999999975322 1112222222211 1111
Q ss_pred hhhHHHHHHHHHHHhhccCcCCCC
Q 047576 579 RKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 579 ~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.....+...+.+++.+||+.||++
T Consensus 261 ~~~~~~~~~l~~li~~cl~~dP~~ 284 (307)
T 3omv_A 261 KLYKNCPKAMKRLVADCVKKVKEE 284 (307)
T ss_dssp TSCTTSCHHHHHHHHHHTCSSSTT
T ss_pred cccccchHHHHHHHHHHcCCCHhH
Confidence 111123455889999999999985
No 3
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.2e-41 Score=351.65 Aligned_cols=219 Identities=24% Similarity=0.369 Sum_probs=165.5
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHH------------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVL------------------------ 422 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il------------------------ 422 (602)
.++|...+.||+|+||+||+|+. .+|+.||||++....... ...+.+.+|+.++
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS-KEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCH-HHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 36899999999999999999986 479999999987654332 2356788999988
Q ss_pred -HhhhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 423 -SQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 423 -~~l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
||+++|+|.+++... ....+++.+++.|+.||+.||+||| +++||||||||+|||++.++.+||+|||+|+....
T Consensus 102 mEy~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp EECCTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred EeCCCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 555566666655432 1234688999999999999999999 88999999999999999999999999999987654
Q ss_pred CCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhh
Q 047576 502 DSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
.....+..+||+.|||||++.+..|+.++||||+||++|||+||+.||.... ....+..++....++.. ..
T Consensus 178 ~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-------~~~~~~~i~~~~~~~~~-~~- 248 (350)
T 4b9d_A 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-------MKNLVLKIISGSFPPVS-LH- 248 (350)
T ss_dssp HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-------HHHHHHHHHHTCCCCCC-TT-
T ss_pred CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-------HHHHHHHHHcCCCCCCC-cc-
Confidence 3222344679999999999999999999999999999999999999997532 12233444444443221 11
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+||++||++
T Consensus 249 --~s~~~~~li~~~L~~dP~~ 267 (350)
T 4b9d_A 249 --YSYDLRSLVSQLFKRNPRD 267 (350)
T ss_dssp --SCHHHHHHHHHHTCSSGGG
T ss_pred --CCHHHHHHHHHHccCChhH
Confidence 2234789999999999974
No 4
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2e-41 Score=344.75 Aligned_cols=217 Identities=26% Similarity=0.385 Sum_probs=167.8
Q ss_pred ccccCcccccccccccceeeecC------CCcEEeeeccCCchhHHHHHhhhhHhHHHHH--------------------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLP------NGRVFALKKLNSPETEELAFIRSFRNEAQVL-------------------- 422 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~~E~~il-------------------- 422 (602)
++|...+.||+|+||+||+|++. +++.||||+++..... ..+.|.+|++++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~---~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 89 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDN---ARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 89 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHH---HHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChH---HHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence 56888899999999999999753 5789999999765432 457899999988
Q ss_pred -----HhhhcCcccccccccc----------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCc
Q 047576 423 -----SQMERGSLFRILHNDA----------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLE 487 (602)
Q Consensus 423 -----~~l~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~ 487 (602)
||+++|+|.++++... ....++|.+++.|+.|||+||+||| +++||||||||+|||++.++.
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~ 166 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLL 166 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGC
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCc
Confidence 6677777777776432 1235899999999999999999999 789999999999999999999
Q ss_pred ceeecccccccccCCCCC--ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccc
Q 047576 488 AFVADFGTARLLHADSSN--QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIM 564 (602)
Q Consensus 488 ~kL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~ 564 (602)
+||+|||+|+........ .....||+.|||||++.+..++.++|||||||++|||+| |+.||..... .+.
T Consensus 167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~-------~~~ 239 (299)
T 4asz_A 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-------NEV 239 (299)
T ss_dssp EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-------HHH
T ss_pred EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-------HHH
Confidence 999999999876443221 223468999999999999999999999999999999999 9999975321 222
Q ss_pred hhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 565 LIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 565 ~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
+..+.+.... +.++. ....+.+++.+||+.||++
T Consensus 240 ~~~i~~~~~~-~~p~~---~~~~~~~li~~cl~~dP~~ 273 (299)
T 4asz_A 240 IECITQGRVL-QRPRT---CPQEVYELMLGCWQREPHM 273 (299)
T ss_dssp HHHHHHTCCC-CCCTT---CCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHcCCCC-CCCcc---chHHHHHHHHHHcCCChhH
Confidence 3333333222 11111 3445889999999999974
No 5
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=7.2e-40 Score=336.97 Aligned_cols=282 Identities=27% Similarity=0.472 Sum_probs=235.0
Q ss_pred CCHHHHHHHhc------cCCCCCCCCCCCCCCCCC--CCCceeCCC---CCEEEEEecCCCCCCCc--ccccCCCCCCCC
Q 047576 64 PIQLETKALLN------TGWWNNSWTMDYDSDHCE--WIGITCNSA---GSIIGLHLSKDNVNFNG--RLSHLNFSCFPN 130 (602)
Q Consensus 64 ~~~~~~~al~~------~~~~~~~w~~~~~~~~C~--w~gv~C~~~---~~v~~l~l~~~~~~~~~--~l~~~~~~~l~~ 130 (602)
|.+.|++||++ ...+.++|.. +.+||. |.||+|+.. ++|+.|++++.++. | .++. .++.+++
T Consensus 3 c~~~~~~aL~~~k~~~~~~~~l~~W~~--~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~--~~~~~~~-~l~~l~~ 77 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLGNPTTLSSWLP--TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLP--KPYPIPS-SLANLPY 77 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCCGGGTTCCT--TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCS--SCEECCG-GGGGCTT
T ss_pred CCHHHHHHHHHHHHhcCCcccccCCCC--CCCCCcCCCcceEeCCCCCCceEEEEECCCCCcc--CCcccCh-hHhCCCC
Confidence 45677777765 1123356753 468998 999999864 79999999766543 4 4443 5677778
Q ss_pred CccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-------cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEe
Q 047576 131 LESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDV 203 (602)
Q Consensus 131 L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 203 (602)
|+.|++.. .+++.+.+|..|+++++|++|+|++|+|++ .+++|++|+|++|.+++.+|..|+++++|++|+|
T Consensus 78 L~~L~L~~-~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 156 (313)
T 1ogq_A 78 LNFLYIGG-INNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITF 156 (313)
T ss_dssp CSEEEEEE-ETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEEC
T ss_pred CCeeeCCC-CCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEEC
Confidence 88777751 277888899999999999999999998873 4788999999999999999999999999999999
Q ss_pred cCCCCCCCCcccccCcC-CCceeecccccCCC-CcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCC
Q 047576 204 GDNSLIGPIPLTLSRLT-SLKILILAQNQLSG-LPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNS 281 (602)
Q Consensus 204 ~~N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 281 (602)
++|++++.+|..++.++ +|++|++++|++++ +|..+..++ |+.|++++|++++.+|..+..+++|+.|+|++|.+++
T Consensus 157 ~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 235 (313)
T 1ogq_A 157 DGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp CSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECC
T ss_pred cCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceee
Confidence 99999888999998888 89999999999987 888888887 9999999999998888889999999999999999987
Q ss_pred CCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCc-CCCc
Q 047576 282 SIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNK-LSGR 354 (602)
Q Consensus 282 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~g~ 354 (602)
.+|. +..+++|++|+|++|+|++.+|..+..+++|+.|+|++|+++|.+|.. ..+++|+.+++++|+ ++|.
T Consensus 236 ~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 236 DLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp BGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEEST
T ss_pred ecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccCC
Confidence 7765 788889999999999999889999999999999999999999888876 888899999999997 6764
No 6
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.9e-41 Score=344.06 Aligned_cols=218 Identities=24% Similarity=0.338 Sum_probs=167.6
Q ss_pred ccccCcccccccccccceeeec------CCCcEEeeeccCCchhHHHHHhhhhHhHHHHH--------------------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQL------PNGRVFALKKLNSPETEELAFIRSFRNEAQVL-------------------- 422 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il-------------------- 422 (602)
.+++..+.||+|+||+||+|++ .+++.||||+++..... ...+.|.+|+.++
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~--~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~ 103 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG--PLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP 103 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccCh--HHHHHHHHHHHHHHhCCCCCCCCcceEEEECCE
Confidence 3566678899999999999985 25789999999754322 2346789999988
Q ss_pred -----HhhhcCcccccccccc-------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCC
Q 047576 423 -----SQMERGSLFRILHNDA-------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS 484 (602)
Q Consensus 423 -----~~l~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~ 484 (602)
||+++|+|.+++.... ....++|.++..|+.|||+||+||| +++||||||||+|||+|+
T Consensus 104 ~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~ 180 (308)
T 4gt4_A 104 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYD 180 (308)
T ss_dssp CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECG
T ss_pred EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECC
Confidence 6777777777775321 1235899999999999999999999 789999999999999999
Q ss_pred CCcceeecccccccccCCC--CCccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCc
Q 047576 485 KLEAFVADFGTARLLHADS--SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDP 561 (602)
Q Consensus 485 ~~~~kL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~ 561 (602)
++.+||+|||+++...... ...+...||+.|||||++.++.++.++|||||||++|||+| |+.||.....
T Consensus 181 ~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~------- 253 (308)
T 4gt4_A 181 KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------- 253 (308)
T ss_dssp GGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH-------
T ss_pred CCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH-------
Confidence 9999999999998764322 22334579999999999999999999999999999999999 8999975321
Q ss_pred ccchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 562 KIMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 562 ~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.+.+..+.+... .+.+.. +...+.+++..||+.||++
T Consensus 254 ~~~~~~i~~~~~-~~~p~~---~~~~~~~li~~C~~~dP~~ 290 (308)
T 4gt4_A 254 QDVVEMIRNRQV-LPCPDD---CPAWVYALMIECWNEFPSR 290 (308)
T ss_dssp HHHHHHHHTTCC-CCCCTT---CCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHHHHcCCC-CCCccc---chHHHHHHHHHHcCCChhH
Confidence 222223333222 222222 4455889999999999974
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=7.4e-41 Score=345.24 Aligned_cols=219 Identities=22% Similarity=0.343 Sum_probs=168.7
Q ss_pred ccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc----------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND---------- 437 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~---------- 437 (602)
..|+..+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|+.++..+.|+++.+++...
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh---HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 45888889999999999999864 7999999998654332 346688999999665555555443211
Q ss_pred -----------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCCc
Q 047576 438 -----------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQ 506 (602)
Q Consensus 438 -----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~~ 506 (602)
.....+++.++..|+.||+.||+||| +++||||||||+|||++.++.+||+|||+|+....+....
T Consensus 151 Ey~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 227 (346)
T 4fih_A 151 EFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 227 (346)
T ss_dssp CCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCB
T ss_pred eCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcc
Confidence 01234899999999999999999999 7899999999999999999999999999999876655555
Q ss_pred cccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHHHHH
Q 047576 507 TLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQDIL 586 (602)
Q Consensus 507 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 586 (602)
...+||+.|||||++.+..|+.++||||+||++|||+||+.||..... ...+..+.+. .++.... ......
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------~~~~~~i~~~-~~~~~~~-~~~~s~ 298 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-------LKAMKMIRDN-LPPRLKN-LHKVSP 298 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHS-SCCCCSC-GGGSCH
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HHHHHHHHcC-CCCCCCc-cccCCH
Confidence 567899999999999999999999999999999999999999975322 1122222222 1111110 011223
Q ss_pred HHHHHHhhccCcCCCC
Q 047576 587 LVSTISFACLQSNPKS 602 (602)
Q Consensus 587 ~l~~l~~~Cl~~dP~e 602 (602)
.+.+++.+||++||++
T Consensus 299 ~~~dli~~~L~~dP~~ 314 (346)
T 4fih_A 299 SLKGFLDRLLVRDPAQ 314 (346)
T ss_dssp HHHHHHHHHSCSSTTT
T ss_pred HHHHHHHHHcCCChhH
Confidence 4789999999999985
No 8
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=8e-41 Score=344.89 Aligned_cols=216 Identities=27% Similarity=0.395 Sum_probs=162.2
Q ss_pred ccccCcccccccccccceeeecC------CCcEEeeeccCCchhHHHHHhhhhHhHHHHH--------------------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLP------NGRVFALKKLNSPETEELAFIRSFRNEAQVL-------------------- 422 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~~E~~il-------------------- 422 (602)
++|...+.||+|+||+||+|++. +++.||||+++..... ..+.|.+|++++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~---~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 117 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASES---ARQDFQREAELLTMLQHQHIVRFFGVCTEGRP 117 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHH---HHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHH---HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence 56777889999999999999753 5789999999765432 457899999988
Q ss_pred -----HhhhcCccccccccccc------------hhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCC
Q 047576 423 -----SQMERGSLFRILHNDAE------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSK 485 (602)
Q Consensus 423 -----~~l~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~ 485 (602)
||+++|+|.++++.... ..+++|.+++.|+.|||+||+||| +++||||||||+|||++.+
T Consensus 118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~ 194 (329)
T 4aoj_A 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQG 194 (329)
T ss_dssp EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETT
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCC
Confidence 66777777777654321 235899999999999999999999 7899999999999999999
Q ss_pred CcceeecccccccccCCCC--CccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcc
Q 047576 486 LEAFVADFGTARLLHADSS--NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPK 562 (602)
Q Consensus 486 ~~~kL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~ 562 (602)
+.+||+|||+|+....... ..+...||+.|||||++.+..++.++|||||||++|||+| |+.||..... .
T Consensus 195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~-------~ 267 (329)
T 4aoj_A 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN-------T 267 (329)
T ss_dssp TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH-------H
T ss_pred CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH-------H
Confidence 9999999999987644322 2234579999999999999999999999999999999999 9999975322 1
Q ss_pred cchhhhhcc-CCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 563 IMLIDVLDQ-RLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 563 ~~~~~~~d~-~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
+.+..+.+. +++.| +. ....+.+++.+||+.||++
T Consensus 268 ~~~~~i~~g~~~~~p--~~---~~~~~~~li~~cl~~dP~~ 303 (329)
T 4aoj_A 268 EAIDCITQGRELERP--RA---CPPEVYAIMRGCWQREPQQ 303 (329)
T ss_dssp HHHHHHHHTCCCCCC--TT---CCHHHHHHHHHHCCSSTTT
T ss_pred HHHHHHHcCCCCCCc--cc---ccHHHHHHHHHHcCcChhH
Confidence 222233322 12222 11 3345889999999999985
No 9
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.6e-41 Score=342.33 Aligned_cols=216 Identities=24% Similarity=0.331 Sum_probs=163.8
Q ss_pred CccccCcccccccccccceeeec----CCCcEEeeeccCCchhHHHHHhhhhHhHHHHH---------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL----PNGRVFALKKLNSPETEELAFIRSFRNEAQVL--------------------- 422 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~----~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il--------------------- 422 (602)
+++|+..+.||+|+||+||+|+. ..++.||||++++...... ....+.+|++++
T Consensus 23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEVNHPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE-ECC------CCCCCCCCTTEECEEEEEEETTEE
T ss_pred ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH-HHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEE
Confidence 46899999999999999999974 2578999999875532211 123566787766
Q ss_pred ----HhhhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccc
Q 047576 423 ----SQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARL 498 (602)
Q Consensus 423 ----~~l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~ 498 (602)
||+++|+|.+++.. ...+++.++..|+.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.
T Consensus 102 ~ivmEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EEEECCCTTCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEEEcCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 66777777777654 345899999999999999999999 88999999999999999999999999999987
Q ss_pred ccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCC
Q 047576 499 LHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVD 578 (602)
Q Consensus 499 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 578 (602)
...........+||+.|||||++.+..++.++||||+||++|||+||+.||...+ ....+..+....++.|.
T Consensus 176 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-------~~~~~~~i~~~~~~~p~- 247 (304)
T 3ubd_A 176 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD-------RKETMTMILKAKLGMPQ- 247 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCCCT-
T ss_pred ccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC-------HHHHHHHHHcCCCCCCC-
Confidence 6544444455789999999999999999999999999999999999999997532 12233444444443321
Q ss_pred hhhHHHHHHHHHHHhhccCcCCCC
Q 047576 579 RKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 579 ~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
. ....+.+++.+||++||++
T Consensus 248 -~---~s~~~~~li~~~L~~dP~~ 267 (304)
T 3ubd_A 248 -F---LSPEAQSLLRMLFKRNPAN 267 (304)
T ss_dssp -T---SCHHHHHHHHHHTCSSGGG
T ss_pred -c---CCHHHHHHHHHHcccCHHH
Confidence 1 1234788999999999974
No 10
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.1e-40 Score=327.92 Aligned_cols=218 Identities=21% Similarity=0.296 Sum_probs=156.6
Q ss_pred ccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc----------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND---------- 437 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~---------- 437 (602)
++|...+.||+|+||+||+|+. .+|+.||||++.+.........+.+.+|+.++..+.|+++.++....
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 5799999999999999999986 47999999999766554444567789999999888887776654321
Q ss_pred -----------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCCc
Q 047576 438 -----------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQ 506 (602)
Q Consensus 438 -----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~~ 506 (602)
.....+++.+++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+...... ..
T Consensus 93 Ey~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~-~~ 168 (275)
T 3hyh_A 93 EYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FL 168 (275)
T ss_dssp ECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC-cc
Confidence 11235899999999999999999999 7899999999999999999999999999998765433 23
Q ss_pred cccccccccccccccccCcC-CccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHHHH
Q 047576 507 TLLAGSYGYIAPELAYTMVM-TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQDI 585 (602)
Q Consensus 507 ~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 585 (602)
....||+.|||||++.+..+ +.++||||+||++|||+||+.||+.... ...+..+.+...+.+. . ..
T Consensus 169 ~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~-------~~~~~~i~~~~~~~p~--~---~s 236 (275)
T 3hyh_A 169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-------PVLFKNISNGVYTLPK--F---LS 236 (275)
T ss_dssp ------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCCCCCT--T---SC
T ss_pred CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHcCCCCCCC--C---CC
Confidence 34689999999999998876 5799999999999999999999974321 1222333333333221 1 12
Q ss_pred HHHHHHHhhccCcCCCC
Q 047576 586 LLVSTISFACLQSNPKS 602 (602)
Q Consensus 586 ~~l~~l~~~Cl~~dP~e 602 (602)
..+.+++.+|+++||++
T Consensus 237 ~~~~~li~~~L~~dP~~ 253 (275)
T 3hyh_A 237 PGAAGLIKRMLIVNPLN 253 (275)
T ss_dssp HHHHHHHHHHSCSSGGG
T ss_pred HHHHHHHHHHccCChhH
Confidence 33778999999999974
No 11
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=8.1e-40 Score=330.72 Aligned_cols=215 Identities=22% Similarity=0.341 Sum_probs=160.6
Q ss_pred cCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc-------------
Q 047576 372 DSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND------------- 437 (602)
Q Consensus 372 ~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~------------- 437 (602)
.....||+|+||+||+|+.. +++.||+|++....... ...+.|.+|+.++..+.|+++..++...
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK-SERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH-HHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCH-HHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 55678999999999999864 68899999987544322 2356799999999777777766654310
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCC--eEEeCCCCCCeeeCC-CCcceeecccccccccC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPS--VVHRDISSNNILLNS-KLEAFVADFGTARLLHA 501 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~DLkp~NILld~-~~~~kL~DFG~a~~~~~ 501 (602)
.....+++.++..|+.||+.||+||| +++ ||||||||+|||++. ++.+||+|||+|+....
T Consensus 108 mEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 01234889999999999999999999 666 999999999999985 79999999999986432
Q ss_pred CCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhh
Q 047576 502 DSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
......+||+.|||||++.+ .++.++|||||||++|||+||+.||...... ......+.....+...+..
T Consensus 185 --~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~------~~~~~~i~~~~~~~~~~~~- 254 (290)
T 3fpq_A 185 --SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA------AQIYRRVTSGVKPASFDKV- 254 (290)
T ss_dssp --TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH------HHHHHHHTTTCCCGGGGGC-
T ss_pred --CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH------HHHHHHHHcCCCCCCCCcc-
Confidence 23445689999999998865 6999999999999999999999999743211 1111122222222111111
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+||++||++
T Consensus 255 --~~~~~~~li~~~L~~dP~~ 273 (290)
T 3fpq_A 255 --AIPEVKEIIEGCIRQNKDE 273 (290)
T ss_dssp --CCHHHHHHHHHHSCSSGGG
T ss_pred --CCHHHHHHHHHHccCChhH
Confidence 2234789999999999974
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=7.3e-40 Score=346.06 Aligned_cols=216 Identities=23% Similarity=0.335 Sum_probs=168.1
Q ss_pred ccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc---------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA--------- 438 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~--------- 438 (602)
..|+..+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.++..+.|+++.+++....
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS---SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh---HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 46888899999999999999864 7999999998654332 3456889999995555555554432110
Q ss_pred ------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCCc
Q 047576 439 ------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQ 506 (602)
Q Consensus 439 ------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~~ 506 (602)
....+++.++..|+.||+.||+||| +++||||||||+|||++.++.+||+|||+|+.+.......
T Consensus 228 Ey~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 304 (423)
T 4fie_A 228 EFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 304 (423)
T ss_dssp ECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCB
T ss_pred eCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccc
Confidence 1234899999999999999999999 8899999999999999999999999999999876655555
Q ss_pred cccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhcc---CCCCCCChhhHH
Q 047576 507 TLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ---RLPPPVDRKVIQ 583 (602)
Q Consensus 507 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~---~l~~~~~~~~~~ 583 (602)
...+||+.|||||++.+..|+.++||||+||++|||++|+.||...... ..+..+.+. .+... ..
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-------~~~~~i~~~~~~~~~~~--~~--- 372 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-------KAMKMIRDNLPPRLKNL--HK--- 372 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHSCCCCCSCT--TS---
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-------HHHHHHHcCCCCCCccc--cc---
Confidence 5678999999999999999999999999999999999999999753221 112222222 22111 11
Q ss_pred HHHHHHHHHhhccCcCCCC
Q 047576 584 DILLVSTISFACLQSNPKS 602 (602)
Q Consensus 584 ~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+||++||++
T Consensus 373 ~s~~~~dli~~~L~~dP~~ 391 (423)
T 4fie_A 373 VSPSLKGFLDRLLVRDPAQ 391 (423)
T ss_dssp SCHHHHHHHHHHSCSSTTT
T ss_pred CCHHHHHHHHHHcCCChhH
Confidence 2234789999999999985
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.4e-39 Score=330.99 Aligned_cols=225 Identities=25% Similarity=0.368 Sum_probs=160.8
Q ss_pred ccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHH--------------------------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVL-------------------------- 422 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il-------------------------- 422 (602)
++|...+.||+|+||+||+|++ +|+.||||++....... ..+..|+..+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~----~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~ 77 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERS----WFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHH----HHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhh----HHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEE
Confidence 4577788999999999999998 68999999997544321 1122344332
Q ss_pred ---HhhhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhc-----CCCCeEEeCCCCCCeeeCCCCcceeeccc
Q 047576 423 ---SQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHD-----CSPSVVHRDISSNNILLNSKLEAFVADFG 494 (602)
Q Consensus 423 ---~~l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-----~~~~ivH~DLkp~NILld~~~~~kL~DFG 494 (602)
||+++|+|.++++. ..++|.++.+++.|+++||+|||+. +.++||||||||+|||+|.++.+||+|||
T Consensus 78 lV~Ey~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 78 LVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EEecCCCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 55666666666643 3489999999999999999999943 13499999999999999999999999999
Q ss_pred ccccccCCCCC----ccccccccccccccccccC------cCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCC----
Q 047576 495 TARLLHADSSN----QTLLAGSYGYIAPELAYTM------VMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYD---- 560 (602)
Q Consensus 495 ~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~---- 560 (602)
+|+........ .....||+.|||||++.+. .++.++|||||||++|||+||+.||.........+.
T Consensus 154 la~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~ 233 (303)
T 3hmm_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp TCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSC
T ss_pred CCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccc
Confidence 99877543321 2235799999999998764 467899999999999999999998864332221111
Q ss_pred c----ccchhhhhccCCCCCCCh--hhHHHHHHHHHHHhhccCcCCCC
Q 047576 561 P----KIMLIDVLDQRLPPPVDR--KVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 561 ~----~~~~~~~~d~~l~~~~~~--~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
. ......+.+..++++.+. ...+....+.+++.+||+.||++
T Consensus 234 ~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~ 281 (303)
T 3hmm_A 234 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAA 281 (303)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGG
T ss_pred ccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhH
Confidence 0 111222344444333222 11245667899999999999974
No 14
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.5e-39 Score=334.46 Aligned_cols=210 Identities=22% Similarity=0.293 Sum_probs=159.3
Q ss_pred ccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHH-------------------------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVL------------------------- 422 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il------------------------- 422 (602)
+.|...+.||+|+||.||+|+. .+|+.||||+++... ...+|+.++
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~--------~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivm 129 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV--------FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFM 129 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--------CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH--------hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 4677778899999999999986 469999999986432 224577765
Q ss_pred HhhhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCC-cceeecccccccccC
Q 047576 423 SQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKL-EAFVADFGTARLLHA 501 (602)
Q Consensus 423 ~~l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~-~~kL~DFG~a~~~~~ 501 (602)
||+++|+|.++++. ...+++.++..|+.||+.||+||| +++||||||||+|||++.++ ++||+|||+|+....
T Consensus 130 Ey~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQ---MGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp CCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred eccCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 66677777776653 345899999999999999999999 88999999999999999987 699999999988754
Q ss_pred CCCC-----ccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCC-
Q 047576 502 DSSN-----QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPP- 575 (602)
Q Consensus 502 ~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~- 575 (602)
+... ....+||+.|||||++.+..++.++||||+||++|||+||+.||..... ...+..+.....+.
T Consensus 204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~-------~~~~~~i~~~~~~~~ 276 (336)
T 4g3f_A 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR-------GPLCLKIASEPPPIR 276 (336)
T ss_dssp ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC-------SCCHHHHHHSCCGGG
T ss_pred CCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH-------HHHHHHHHcCCCCch
Confidence 3221 2235799999999999999999999999999999999999999975322 11222333322110
Q ss_pred CCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 576 PVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 576 ~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
..... ....+.+++.+||++||++
T Consensus 277 ~~~~~---~s~~~~~li~~~L~~dP~~ 300 (336)
T 4g3f_A 277 EIPPS---CAPLTAQAIQEGLRKEPVH 300 (336)
T ss_dssp GSCTT---SCHHHHHHHHHHTCSSGGG
T ss_pred hcCcc---CCHHHHHHHHHHccCCHhH
Confidence 01111 2234788999999999974
No 15
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=7.7e-40 Score=340.32 Aligned_cols=220 Identities=24% Similarity=0.305 Sum_probs=167.8
Q ss_pred CccccCcccccccccccceeeecC------CCcEEeeeccCCchhHHHHHhhhhHhHHHHH-------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP------NGRVFALKKLNSPETEELAFIRSFRNEAQVL------------------- 422 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~~E~~il------------------- 422 (602)
.++|...+.||+|+||+||+|+.. .++.||||+++..... ...+.|.+|+.++
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~--~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~ 140 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGACTKP 140 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccCh--HHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence 357888899999999999999742 3468999999765433 2346788899887
Q ss_pred --------HhhhcCccccccccccc-------------hhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCee
Q 047576 423 --------SQMERGSLFRILHNDAE-------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNIL 481 (602)
Q Consensus 423 --------~~l~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NIL 481 (602)
||+++|+|.++++.... ...++|.+++.|+.|||+||+||| +++||||||||+|||
T Consensus 141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~~NIL 217 (353)
T 4ase_A 141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNIL 217 (353)
T ss_dssp TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEE
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCcccee
Confidence 55666666666653221 234899999999999999999999 789999999999999
Q ss_pred eCCCCcceeecccccccccCCCCC--ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccC
Q 047576 482 LNSKLEAFVADFGTARLLHADSSN--QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSS 558 (602)
Q Consensus 482 ld~~~~~kL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~ 558 (602)
+++++.+||+|||+|+....+... .+...||+.|||||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 218 l~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~---- 293 (353)
T 4ase_A 218 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI---- 293 (353)
T ss_dssp ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC----
T ss_pred eCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH----
Confidence 999999999999999876544322 234578999999999999999999999999999999998 9999975321
Q ss_pred CCcccchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 559 YDPKIMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 559 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
...+...+....+++.+.. ...++.+++..||+.||++
T Consensus 294 ---~~~~~~~i~~g~~~~~p~~---~~~~~~~li~~c~~~dP~~ 331 (353)
T 4ase_A 294 ---DEEFCRRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQ 331 (353)
T ss_dssp ---SHHHHHHHHHTCCCCCCTT---CCHHHHHHHHHHTCSSGGG
T ss_pred ---HHHHHHHHHcCCCCCCCcc---CCHHHHHHHHHHcCcChhH
Confidence 1122233322222121111 2345889999999999974
No 16
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.6e-38 Score=323.61 Aligned_cols=216 Identities=23% Similarity=0.395 Sum_probs=153.5
Q ss_pred ccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccc------------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILH------------ 435 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~------------ 435 (602)
.+|+..+.||+|+||+||+|+. .+|+.||||+++..... ...+.+.+|+.++..+.|+++.+++.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~--~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRE--LAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSH--HHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCH--HHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 4688889999999999999986 47999999998654332 23467889999997777777665442
Q ss_pred -------------------------cccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCccee
Q 047576 436 -------------------------NDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFV 490 (602)
Q Consensus 436 -------------------------~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL 490 (602)
........++..++.|+.||+.||+||| +++|+||||||+|||++.++.+||
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEE
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEE
Confidence 1111223456778899999999999999 789999999999999999999999
Q ss_pred ecccccccccCCCCC------------ccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccC
Q 047576 491 ADFGTARLLHADSSN------------QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSS 558 (602)
Q Consensus 491 ~DFG~a~~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~ 558 (602)
+|||+|+....+... .+..+||+.|||||++.+..++.++||||+||++|||++ ||.....
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~---- 232 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME---- 232 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH----
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH----
Confidence 999999877543211 123479999999999999999999999999999999996 7753211
Q ss_pred CCcccchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 559 YDPKIMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 559 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+..+.+...+ +...+......+++.+||++||++
T Consensus 233 --~~~~~~~~~~~~~p----~~~~~~~~~~~~li~~~L~~dP~~ 270 (299)
T 4g31_A 233 --RVRTLTDVRNLKFP----PLFTQKYPCEYVMVQDMLSPSPME 270 (299)
T ss_dssp --HHHHHHHHHTTCCC----HHHHHHCHHHHHHHHHHTCSSGGG
T ss_pred --HHHHHHHHhcCCCC----CCCcccCHHHHHHHHHHcCCChhH
Confidence 11112223332222 122223344678999999999974
No 17
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.9e-37 Score=349.29 Aligned_cols=287 Identities=23% Similarity=0.362 Sum_probs=252.4
Q ss_pred CCCCHHHHHHHhc------cCCCC---------CCCCCCCCCCCCCC---CCceeCCCCCEEEEEecCCCCCCCcccccC
Q 047576 62 LSPIQLETKALLN------TGWWN---------NSWTMDYDSDHCEW---IGITCNSAGSIIGLHLSKDNVNFNGRLSHL 123 (602)
Q Consensus 62 ~~~~~~~~~al~~------~~~~~---------~~w~~~~~~~~C~w---~gv~C~~~~~v~~l~l~~~~~~~~~~l~~~ 123 (602)
......|+.||.+ ...|. .+|+ .+.+||.| .||+|+..++|++|++++.+ +.|.++.
T Consensus 25 ~~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~--~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~--l~g~lp~- 99 (636)
T 4eco_A 25 TAEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWN--FNKELDMWGAQPGVSLNSNGRVTGLSLEGFG--ASGRVPD- 99 (636)
T ss_dssp CCHHHHHHHHHHHHHHHTTGGGCCCCC------CCCC--CSSCGGGTTCCTTEEECTTCCEEEEECTTSC--CEEEECG-
T ss_pred hhhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCC--CCCCcccccCCCCeEEcCCCCEEEEEecCcc--cCCcCCh-
Confidence 3445678888877 12243 1565 35899999 99999988999999997654 4577774
Q ss_pred CCCCCCCCccchhccc----------------------------------------------------------------
Q 047576 124 NFSCFPNLESLRILAY---------------------------------------------------------------- 139 (602)
Q Consensus 124 ~~~~l~~L~~L~l~~~---------------------------------------------------------------- 139 (602)
.++.+++|+.|++...
T Consensus 100 ~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 179 (636)
T 4eco_A 100 AIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSS 179 (636)
T ss_dssp GGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCC
T ss_pred HHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCcccccccccc
Confidence 6889999999888643
Q ss_pred ------------cCCccccCCccCCCCCCCCEEECcCCcCcc--------------------------cCCCcCEEECcC
Q 047576 140 ------------YDGFTGSIPSEISALSKLQLLDLSSNRLRG--------------------------RLTNLNYMSLSR 181 (602)
Q Consensus 140 ------------~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~--------------------------~l~~L~~L~L~~ 181 (602)
.+++.| ||++|+++++|++|+|++|+|++ .+++|++|+|++
T Consensus 180 ~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~ 258 (636)
T 4eco_A 180 RITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYN 258 (636)
T ss_dssp CCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEEC
T ss_pred ccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecC
Confidence 124556 89999999999999999999998 688999999999
Q ss_pred CcCCCCCchhhhCCCCCCEEEecCCC-CCC-CCcccccCc------CCCceeecccccCCCCcc--cccCCCCCcEEEcc
Q 047576 182 NMLGGLLPQEIGNLKNLIELDVGDNS-LIG-PIPLTLSRL------TSLKILILAQNQLSGLPQ--EIGNLKNLMLLDVG 251 (602)
Q Consensus 182 N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l------~~L~~L~L~~N~l~~ip~--~~~~l~~L~~L~L~ 251 (602)
|.+.+.+|..|+++++|++|+|++|+ ++| .+|..++.+ ++|++|++++|+++.+|. .++++++|++|+++
T Consensus 259 n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~ 338 (636)
T 4eco_A 259 CPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECL 338 (636)
T ss_dssp CTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECC
T ss_pred CcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCc
Confidence 99999999999999999999999998 998 899999887 999999999999999999 89999999999999
Q ss_pred CCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCC-CCEEeccCCCCCCCCCcccCCCC--CCCEEeCCCCCCC
Q 047576 252 NNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQ-LFHLDLSSNKLSGKIPSQIASME--DLTWLDLSNNNIK 328 (602)
Q Consensus 252 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~ 328 (602)
+|+++|.+| .++.+++|++|++++|+++ .+|..++.+++ |++|+|++|+++ .+|..+..++ +|+.|++++|+++
T Consensus 339 ~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~ 415 (636)
T 4eco_A 339 YNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIG 415 (636)
T ss_dssp SCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTT
T ss_pred CCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCC
Confidence 999999999 8999999999999999999 78888999999 999999999999 7888887765 8999999999999
Q ss_pred CCCCcccc-------cccccccccccCCcCCCccCCC
Q 047576 329 GSIPGEIT-------KLSRLDYLNLSGNKLSGRVPYS 358 (602)
Q Consensus 329 ~~~p~~~~-------~l~~L~~L~l~~N~l~g~~p~~ 358 (602)
+.+|..+. .+++|+.|++++|+++ .+|..
T Consensus 416 ~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~ 451 (636)
T 4eco_A 416 SVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKE 451 (636)
T ss_dssp TTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTH
T ss_pred CcchhhhcccccccccCCCCCEEECcCCccC-cCCHH
Confidence 99999888 8889999999999998 45543
No 18
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=5.9e-37 Score=352.73 Aligned_cols=280 Identities=29% Similarity=0.492 Sum_probs=174.1
Q ss_pred CHHHHHHHhcc--CC----CCCCCCCCCCCCCCCCCCceeCCCCCEEEEEecCCCCCCCcc---ccc-------------
Q 047576 65 IQLETKALLNT--GW----WNNSWTMDYDSDHCEWIGITCNSAGSIIGLHLSKDNVNFNGR---LSH------------- 122 (602)
Q Consensus 65 ~~~~~~al~~~--~~----~~~~w~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~~~~~~~---l~~------------- 122 (602)
...|++||++. +. ..++|. .+.|||.|.||+|+ .++|++|+++..++ .|. +++
T Consensus 10 ~~~~~~all~~k~~~~~~~~l~~W~--~~~~~C~w~gv~C~-~~~v~~L~L~~~~l--~g~~~~l~~~l~~L~~L~~l~~ 84 (768)
T 3rgz_A 10 LYREIHQLISFKDVLPDKNLLPDWS--SNKNPCTFDGVTCR-DDKVTSIDLSSKPL--NVGFSAVSSSLLSLTGLESLFL 84 (768)
T ss_dssp HHHHHHHHHHHHTTCSCTTSSTTCC--TTSCGGGSTTEEEE-TTEEEEEECTTSCC--CEEHHHHHHHTTTCTTCCEEEC
T ss_pred CHHHHHHHHHHHhhCCCcccccCCC--CCCCCcCCcceEEC-CCcEEEEECCCCCc--CCccCccChhHhccCcccccCC
Confidence 56889999862 11 235786 35799999999998 79999999976543 333 221
Q ss_pred ---------CCCCCCCCCccchhccccCCccccCCc--cCCCCCCCCEEECcCCcCc--------ccCCCcCEEECcCCc
Q 047576 123 ---------LNFSCFPNLESLRILAYYDGFTGSIPS--EISALSKLQLLDLSSNRLR--------GRLTNLNYMSLSRNM 183 (602)
Q Consensus 123 ---------~~~~~l~~L~~L~l~~~~~~~~~~ip~--~l~~L~~L~~L~Ls~N~i~--------~~l~~L~~L~L~~N~ 183 (602)
-.++.+++|++|++. ++.+.|.+|. .++++++|++|+|++|.+. +.+++|++|+|++|+
T Consensus 85 ~~~~~~~l~~~~~~l~~L~~L~Ls--~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 85 SNSHINGSVSGFKCSASLTSLDLS--RNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp TTSCEEECCCCCCCCTTCCEEECC--SSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred cCCCcCCCchhhccCCCCCEEECC--CCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 246677777777777 6778888888 8889999999999988876 346788888888888
Q ss_pred CCCCCchh---hhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCC-CcccccCCCCCcEEEccCCCCCCCC
Q 047576 184 LGGLLPQE---IGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSG-LPQEIGNLKNLMLLDVGNNDIIGPI 259 (602)
Q Consensus 184 l~~~~p~~---~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~~~~ 259 (602)
+++..|.. ++++++|++|+|++|.+++.+|. ..+++|++|+|++|++++ +|. ++++++|++|++++|++++.+
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~ 239 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDF 239 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCH
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcc
Confidence 88877766 56666666666666665554442 455555555555555555 333 555555555555555555555
Q ss_pred CCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCC-CCCCEEeCCCCCCCCCCCcccccc
Q 047576 260 PSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASM-EDLTWLDLSNNNIKGSIPGEITKL 338 (602)
Q Consensus 260 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l 338 (602)
|..++.+++|++|++++|.+++.+|.. .+++|++|+|++|+++|.+|..+... ++|++|+|++|++++.+|..++.+
T Consensus 240 ~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l 317 (768)
T 3rgz_A 240 SRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC 317 (768)
T ss_dssp HHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGC
T ss_pred cHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcC
Confidence 555555555555555555555544432 44444444444444444444444332 444444444444444444444444
Q ss_pred cccccccccCCcCCCccC
Q 047576 339 SRLDYLNLSGNKLSGRVP 356 (602)
Q Consensus 339 ~~L~~L~l~~N~l~g~~p 356 (602)
++|+.|++++|+++|.+|
T Consensus 318 ~~L~~L~L~~n~l~~~ip 335 (768)
T 3rgz_A 318 SLLESLALSSNNFSGELP 335 (768)
T ss_dssp TTCCEEECCSSEEEEECC
T ss_pred CCccEEECCCCcccCcCC
Confidence 444444444444444444
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=6.8e-37 Score=337.69 Aligned_cols=218 Identities=22% Similarity=0.274 Sum_probs=165.5
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhH---HHHH---------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNE---AQVL--------------------- 422 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E---~~il--------------------- 422 (602)
.++|...+.||+|+||.||+|+.. +|+.||||++.+.............+| +.++
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 478999999999999999999864 699999999975543322222223333 3333
Q ss_pred ----HhhhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccc
Q 047576 423 ----SQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARL 498 (602)
Q Consensus 423 ----~~l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~ 498 (602)
||+++|+|..++.. ...+++..++.|+.||+.||+||| +++||||||||+|||+|.+|.+||+|||+|+.
T Consensus 268 ylVmEy~~GGdL~~~l~~---~~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEEECCCCSCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeee
Confidence 67777888877764 345899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCCCcccccccccccccccccc-CcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCC
Q 047576 499 LHADSSNQTLLAGSYGYIAPELAYT-MVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPV 577 (602)
Q Consensus 499 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 577 (602)
..... ....+||+.|||||++.+ ..|+.++||||+||++|||+||+.||...... ........+.......+.
T Consensus 342 ~~~~~--~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~----~~~~i~~~i~~~~~~~p~ 415 (689)
T 3v5w_A 342 FSKKK--PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK----DKHEIDRMTLTMAVELPD 415 (689)
T ss_dssp CSSCC--CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC----CHHHHHHHHHHCCCCCCT
T ss_pred cCCCC--CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHhhcCCCCCCCc
Confidence 75433 234689999999999975 57999999999999999999999999743211 111112233333333221
Q ss_pred ChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 578 DRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 578 ~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
. ....+.+++.+|+++||++
T Consensus 416 --~---~S~~a~dLI~~lL~~dP~~ 435 (689)
T 3v5w_A 416 --S---FSPELRSLLEGLLQRDVNR 435 (689)
T ss_dssp --T---SCHHHHHHHHHHTCSCGGG
T ss_pred --c---CCHHHHHHHHHHccCCHhH
Confidence 1 1223789999999999974
No 20
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.2e-36 Score=317.48 Aligned_cols=182 Identities=25% Similarity=0.340 Sum_probs=150.1
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|...+.||+|+||+||+|+. .+|+.||||+++..... ....+.+.+|++++..+.|+++..+++..
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccc-hHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 35799999999999999999986 47999999999755432 22346788999999999998887665310
Q ss_pred ------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccc
Q 047576 438 ------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLL 499 (602)
Q Consensus 438 ------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~ 499 (602)
.....+++.++..|+.||+.||+||| +++||||||||+|||++.++.+||+|||+|+..
T Consensus 132 ~~~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 132 KSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp CCEEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred CEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 01345899999999999999999999 889999999999999999999999999999876
Q ss_pred cCC----CCCccccccccccccccccccC-cCCccchhHHHHHHHHHHHcCCCCCCCCc
Q 047576 500 HAD----SSNQTLLAGSYGYIAPELAYTM-VMTEKYDVYSFGVVTLEVLMGKHPRDLHS 553 (602)
Q Consensus 500 ~~~----~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~Pf~~~~ 553 (602)
... .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||...+
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~ 267 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN 267 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC
Confidence 432 1223446899999999998875 46899999999999999999999997643
No 21
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.5e-35 Score=309.80 Aligned_cols=170 Identities=29% Similarity=0.387 Sum_probs=136.4
Q ss_pred CccccCcccccccccccceeeec----CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHH--------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL----PNGRVFALKKLNSPETEELAFIRSFRNEAQVLS-------------------- 423 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~----~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~-------------------- 423 (602)
.+.|+..+.||+|+||+||+|+. .+++.||+|++...... .++.+|++++.
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~-----~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHP-----IRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCH-----HHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCH-----HHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 46799999999999999999974 25789999988655432 34667888774
Q ss_pred ------hhhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCC-Ccceeeccccc
Q 047576 424 ------QMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSK-LEAFVADFGTA 496 (602)
Q Consensus 424 ------~l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~-~~~kL~DFG~a 496 (602)
|+++|+|.+++. .+++.+++.|+.|++.||+||| +++|+||||||+|||++.+ +.+||+|||+|
T Consensus 95 ~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla 165 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLA 165 (361)
T ss_dssp EEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence 444444444442 3889999999999999999999 8899999999999999877 79999999999
Q ss_pred ccccCCCC----------------------------CccccccccccccccccccCc-CCccchhHHHHHHHHHHHcCCC
Q 047576 497 RLLHADSS----------------------------NQTLLAGSYGYIAPELAYTMV-MTEKYDVYSFGVVTLEVLMGKH 547 (602)
Q Consensus 497 ~~~~~~~~----------------------------~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~elltG~~ 547 (602)
+....... ..+..+||+.|+|||++.+.. ++.++||||+||++|||+||+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~ 245 (361)
T 4f9c_A 166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245 (361)
T ss_dssp EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence 76533211 112347999999999998764 8999999999999999999999
Q ss_pred CCCC
Q 047576 548 PRDL 551 (602)
Q Consensus 548 Pf~~ 551 (602)
||..
T Consensus 246 Pf~~ 249 (361)
T 4f9c_A 246 PFYK 249 (361)
T ss_dssp SSSC
T ss_pred CCCC
Confidence 9954
No 22
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=6.3e-35 Score=335.77 Aligned_cols=286 Identities=23% Similarity=0.321 Sum_probs=237.3
Q ss_pred CCCHHHHHHHhcc--CCCCCCCCCCC---CCCC--CCC------------CCceeCCCCCEEEEEecCCCCCCCcccccC
Q 047576 63 SPIQLETKALLNT--GWWNNSWTMDY---DSDH--CEW------------IGITCNSAGSIIGLHLSKDNVNFNGRLSHL 123 (602)
Q Consensus 63 ~~~~~~~~al~~~--~~~~~~w~~~~---~~~~--C~w------------~gv~C~~~~~v~~l~l~~~~~~~~~~l~~~ 123 (602)
.....|+.||++. ++-..+|+... ..+| |+| .||+|+..++|++|+|++.+ +.|.+++
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~--L~G~ip~- 341 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGKNWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFG--AKGRVPD- 341 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTC--CEEEECG-
T ss_pred ccchHHHHHHHHHHHHcCCCCCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCC--CCCcCch-
Confidence 3456788898872 11112454332 2344 999 99999988999999997654 4577774
Q ss_pred CCCCCCCCccchh-ccc---------------------------------------------------------------
Q 047576 124 NFSCFPNLESLRI-LAY--------------------------------------------------------------- 139 (602)
Q Consensus 124 ~~~~l~~L~~L~l-~~~--------------------------------------------------------------- 139 (602)
.++.+++|+.|++ ...
T Consensus 342 ~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~ 421 (876)
T 4ecn_A 342 AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDS 421 (876)
T ss_dssp GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCC
T ss_pred HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccccc
Confidence 6888888888888 210
Q ss_pred ------------cCCccccCCccCCCCCCCCEEECcCCcCcc--------------------------cCCCcCEEECcC
Q 047576 140 ------------YDGFTGSIPSEISALSKLQLLDLSSNRLRG--------------------------RLTNLNYMSLSR 181 (602)
Q Consensus 140 ------------~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~--------------------------~l~~L~~L~L~~ 181 (602)
.|++.+ ||..|+++++|++|+|++|+|++ .+++|++|+|++
T Consensus 422 ~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~ 500 (876)
T 4ecn_A 422 RISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYN 500 (876)
T ss_dssp CCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEES
T ss_pred ccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcC
Confidence 123333 89999999999999999999998 688999999999
Q ss_pred CcCCCCCchhhhCCCCCCEEEecCCC-CCC-CCcccccCcC-------CCceeecccccCCCCcc--cccCCCCCcEEEc
Q 047576 182 NMLGGLLPQEIGNLKNLIELDVGDNS-LIG-PIPLTLSRLT-------SLKILILAQNQLSGLPQ--EIGNLKNLMLLDV 250 (602)
Q Consensus 182 N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l~-------~L~~L~L~~N~l~~ip~--~~~~l~~L~~L~L 250 (602)
|.+.+.+|..|+++++|++|+|++|+ ++| .+|..++.++ +|+.|+|++|+++.+|. .++++++|+.|+|
T Consensus 501 N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~L 580 (876)
T 4ecn_A 501 CPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDC 580 (876)
T ss_dssp CTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEEC
T ss_pred CCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCCCCCEEEC
Confidence 99999999999999999999999998 998 8998777776 99999999999999998 8999999999999
Q ss_pred cCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCC-CCEEeccCCCCCCCCCcccCCCCC--CCEEeCCCCCC
Q 047576 251 GNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQ-LFHLDLSSNKLSGKIPSQIASMED--LTWLDLSNNNI 327 (602)
Q Consensus 251 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~L~~N~l 327 (602)
++|+++ .+| .|+.+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|+|+ .+|..+..++. |+.|+|++|++
T Consensus 581 s~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l 656 (876)
T 4ecn_A 581 VHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKI 656 (876)
T ss_dssp TTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCT
T ss_pred CCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcC
Confidence 999999 888 8999999999999999999 88888999999 999999999999 78888877654 99999999999
Q ss_pred CCCCCccc---c--cccccccccccCCcCCCccCC
Q 047576 328 KGSIPGEI---T--KLSRLDYLNLSGNKLSGRVPY 357 (602)
Q Consensus 328 ~~~~p~~~---~--~l~~L~~L~l~~N~l~g~~p~ 357 (602)
+|.+|... . .+++|+.|++++|+++ .+|.
T Consensus 657 ~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~ 690 (876)
T 4ecn_A 657 GSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPT 690 (876)
T ss_dssp TTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCH
T ss_pred CCccccchhhhccccCCCcCEEEccCCcCC-ccCH
Confidence 98776432 2 3447888999999888 4554
No 23
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=2.6e-34 Score=297.47 Aligned_cols=257 Identities=22% Similarity=0.280 Sum_probs=219.0
Q ss_pred CHHHHHHHhc--------cCCCCCCCC--CCCCCCCCCCCCceeCC---------CCCEEEEEecCCCCCCCcccccCCC
Q 047576 65 IQLETKALLN--------TGWWNNSWT--MDYDSDHCEWIGITCNS---------AGSIIGLHLSKDNVNFNGRLSHLNF 125 (602)
Q Consensus 65 ~~~~~~al~~--------~~~~~~~w~--~~~~~~~C~w~gv~C~~---------~~~v~~l~l~~~~~~~~~~l~~~~~ 125 (602)
...|++||++ ...|.++|. .+.+.++|.|.|++|+. ..+|+.|+++
T Consensus 25 ~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~--------------- 89 (328)
T 4fcg_A 25 LRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELR--------------- 89 (328)
T ss_dssp CCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEE---------------
T ss_pred CchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEcc---------------
Confidence 4467777765 123445663 12357899999999952 2456666663
Q ss_pred CCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCc------ccCCCcCEEECcCCcCCCCCchhhhCCCCCC
Q 047576 126 SCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLR------GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLI 199 (602)
Q Consensus 126 ~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 199 (602)
+++ ...+|+.++++++|++|+|++|.|+ +.+++|++|+|++|.++ .+|..++++++|+
T Consensus 90 --------------~n~-l~~lp~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~ 153 (328)
T 4fcg_A 90 --------------SVP-LPQFPDQAFRLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLR 153 (328)
T ss_dssp --------------SSC-CSSCCSCGGGGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCC
T ss_pred --------------CCC-chhcChhhhhCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCC
Confidence 233 3378888999999999999999887 34788999999999999 7788999999999
Q ss_pred EEEecCCCCCCCCcccccC---------cCCCceeecccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCc
Q 047576 200 ELDVGDNSLIGPIPLTLSR---------LTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLS 270 (602)
Q Consensus 200 ~L~L~~N~l~~~~p~~l~~---------l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 270 (602)
+|+|++|++.+.+|..++. +++|++|+|++|+++.+|..++++++|++|+|++|++++ +|..+..+++|+
T Consensus 154 ~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~ 232 (328)
T 4fcg_A 154 ELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLE 232 (328)
T ss_dssp EEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCC
T ss_pred EEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCC
Confidence 9999999999999987765 999999999999999999999999999999999999996 666789999999
Q ss_pred cccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCc
Q 047576 271 YLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNK 350 (602)
Q Consensus 271 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 350 (602)
+|+|++|++.+.+|..++.+++|++|+|++|++.+.+|..+..+++|+.|+|++|++.+.+|..+..+++|+.+++..|.
T Consensus 233 ~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~ 312 (328)
T 4fcg_A 233 ELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHL 312 (328)
T ss_dssp EEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGG
T ss_pred EEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred CCC
Q 047576 351 LSG 353 (602)
Q Consensus 351 l~g 353 (602)
+..
T Consensus 313 ~~~ 315 (328)
T 4fcg_A 313 QAQ 315 (328)
T ss_dssp SCC
T ss_pred HHH
Confidence 643
No 24
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=6.8e-35 Score=322.82 Aligned_cols=218 Identities=23% Similarity=0.289 Sum_probs=166.3
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhh--------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME-------------------- 426 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~-------------------- 426 (602)
.++|+..+.||+|+||.||+|+. .+|+.||+|++...... ..+.+.+|+.++..+.
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~---~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES---DKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH---HHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchh---hHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 36799999999999999999986 47999999998765433 2356788999885544
Q ss_pred -----cCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCC--Ccceeecccccccc
Q 047576 427 -----RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSK--LEAFVADFGTARLL 499 (602)
Q Consensus 427 -----~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~--~~~kL~DFG~a~~~ 499 (602)
+|+|.+++.. ....+++.++..|+.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+|+.+
T Consensus 233 ~E~~~gg~L~~~i~~--~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~ 307 (573)
T 3uto_A 233 YEFMSGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307 (573)
T ss_dssp EECCCCCBHHHHHTC--TTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred EeecCCCcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence 4555544432 2235899999999999999999999 8899999999999999854 89999999999987
Q ss_pred cCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCCh
Q 047576 500 HADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDR 579 (602)
Q Consensus 500 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 579 (602)
.... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ...+..+.......+..
T Consensus 308 ~~~~-~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~-------~~~~~~i~~~~~~~~~~- 378 (573)
T 3uto_A 308 DPKQ-SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND-------DETLRNVKSCDWNMDDS- 378 (573)
T ss_dssp CTTS-EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHHHHHHHTTCCCCCSG-
T ss_pred cCCC-ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HHHHHHHHhCCCCCCcc-
Confidence 5433 23446899999999999999999999999999999999999999975322 22223333322221110
Q ss_pred hhHHHHHHHHHHHhhccCcCCCC
Q 047576 580 KVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 580 ~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
........+.+++.+||++||++
T Consensus 379 ~~~~~s~~~~dli~~~L~~dp~~ 401 (573)
T 3uto_A 379 AFSGISEDGKDFIRKLLLADPNT 401 (573)
T ss_dssp GGTTSCHHHHHHHHTTSCSSGGG
T ss_pred cccCCCHHHHHHHHHHccCChhH
Confidence 00112234778999999999974
No 25
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1e-33 Score=325.84 Aligned_cols=233 Identities=36% Similarity=0.599 Sum_probs=197.1
Q ss_pred CCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-------cCCCcCEEECcCCcCCCCCchhhhCCC
Q 047576 124 NFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLK 196 (602)
Q Consensus 124 ~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~ 196 (602)
.++.+++|+.|++. .+.+.+.+|..++++++|++|+|++|++.+ .+++|++|+|++|++++.+|..+++++
T Consensus 413 ~l~~l~~L~~L~Ls--~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 490 (768)
T 3rgz_A 413 TLSNCSELVSLHLS--FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT 490 (768)
T ss_dssp GGGGCTTCCEEECC--SSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT
T ss_pred HHhcCCCCCEEECc--CCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCC
Confidence 46667777777776 667777888888888888888888888874 367888888888888888888888888
Q ss_pred CCCEEEecCCCCCCCCcccccCcCCCceeecccccCCC-CcccccCCCCCcEEEccCCCCCCCCCCcc------------
Q 047576 197 NLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSG-LPQEIGNLKNLMLLDVGNNDIIGPIPSTL------------ 263 (602)
Q Consensus 197 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~~~~p~~l------------ 263 (602)
+|++|+|++|++++.+|..++.+++|++|+|++|++++ +|..++++++|+.|++++|.++|.+|..+
T Consensus 491 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~ 570 (768)
T 3rgz_A 491 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFI 570 (768)
T ss_dssp TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTT
T ss_pred CCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcc
Confidence 88888888888888888888888888888888888887 88888888888888888888887776533
Q ss_pred ----------------------------------------------------------CCCCCCccccCCCCcCCCCCch
Q 047576 264 ----------------------------------------------------------GLFSDLSYLDLSCNQFNSSIPN 285 (602)
Q Consensus 264 ----------------------------------------------------------~~l~~L~~L~L~~N~l~~~~p~ 285 (602)
..+++|++|||++|+++|.+|.
T Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~ 650 (768)
T 3rgz_A 571 AGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPK 650 (768)
T ss_dssp CSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCG
T ss_pred ccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCH
Confidence 3356788888888888888888
Q ss_pred hhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccCCC
Q 047576 286 ELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYS 358 (602)
Q Consensus 286 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~ 358 (602)
.++++++|+.|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..+..+++|++|++++|+++|.+|..
T Consensus 651 ~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~ 723 (768)
T 3rgz_A 651 EIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723 (768)
T ss_dssp GGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS
T ss_pred HHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc
Confidence 8888888999999999998888888888888999999999998888888888888889999999998888865
No 26
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.4e-34 Score=296.71 Aligned_cols=220 Identities=22% Similarity=0.266 Sum_probs=168.0
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|+..+.||+|+||.||+|+.. +|+.||+|++++...........+.+|+.++..+.|+.+..+....
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 367899999999999999999865 6899999999755433333445677899888655555544432210
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS 504 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~ 504 (602)
.....+++.++..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 84 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 01234789999999999999999999 78999999999999999999999999999986544444
Q ss_pred CccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHHH
Q 047576 505 NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQD 584 (602)
Q Consensus 505 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 584 (602)
......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+. . .
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~~~~~p~--~---~ 228 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------ERLFELILMEEIRFPR--T---L 228 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCCCCCCT--T---S
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH-------HHHHHHHHcCCCCCCC--C---C
Confidence 44556899999999999999999999999999999999999999974321 1222333333333221 1 1
Q ss_pred HHHHHHHHhhccCcCCCC
Q 047576 585 ILLVSTISFACLQSNPKS 602 (602)
Q Consensus 585 ~~~l~~l~~~Cl~~dP~e 602 (602)
...+.+++.+|+++||++
T Consensus 229 s~~~~~li~~lL~~dP~~ 246 (337)
T 1o6l_A 229 SPEAKSLLAGLLKKDPKQ 246 (337)
T ss_dssp CHHHHHHHHHHTCSSTTT
T ss_pred CHHHHHHHHHHhhcCHHH
Confidence 233788999999999975
No 27
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3.9e-34 Score=302.96 Aligned_cols=224 Identities=21% Similarity=0.347 Sum_probs=167.9
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHh----------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQ---------------------- 424 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~---------------------- 424 (602)
.++|+..+.||+|+||.||+|+.. +++.||+|++++.........+.+.+|..++..
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 468999999999999999999865 688999999976654434445567778877743
Q ss_pred ----hhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 425 ----MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 425 ----l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
+++|+|..++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 131 V~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEcCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 344444444432 245899999999999999999999 7899999999999999999999999999998644
Q ss_pred CCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccC--CCcccchhhhhccCCCCCCC
Q 047576 501 ADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSS--YDPKIMLIDVLDQRLPPPVD 578 (602)
Q Consensus 501 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~--~~~~~~~~~~~d~~l~~~~~ 578 (602)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||+........ .........+....+..+..
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 284 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 284 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTT
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCc
Confidence 4444455578999999999999999999999999999999999999999753221111 11112233344444432221
Q ss_pred hhhHHHHHHHHHHHhhccCcCCCC
Q 047576 579 RKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 579 ~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+|+++||++
T Consensus 285 -----~s~~~~~li~~lL~~dP~~ 303 (396)
T 4dc2_A 285 -----LSVKAASVLKSFLNKDPKE 303 (396)
T ss_dssp -----SCHHHHHHHHHHTCSCTTT
T ss_pred -----CCHHHHHHHHHHhcCCHhH
Confidence 1234789999999999975
No 28
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.6e-34 Score=301.91 Aligned_cols=217 Identities=22% Similarity=0.336 Sum_probs=163.8
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh---------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------------------- 425 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l--------------------- 425 (602)
.++|...+.||+|+||.||+|+.. +|+.||||++++.........+.+.+|..++..+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 467999999999999999999864 6899999999765443333455677788877443
Q ss_pred -----hcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 426 -----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 426 -----~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
++|+|..++.. ...+++.++..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 102 v~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQK---SRRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 34444444432 245899999999999999999999 7899999999999999999999999999998654
Q ss_pred CCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChh
Q 047576 501 ADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRK 580 (602)
Q Consensus 501 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 580 (602)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||.... ....+..+.......+..
T Consensus 176 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-------~~~~~~~i~~~~~~~p~~-- 246 (353)
T 3txo_A 176 CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN-------EDDLFEAILNDEVVYPTW-- 246 (353)
T ss_dssp C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCCCTT--
T ss_pred cCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC-------HHHHHHHHHcCCCCCCCC--
Confidence 44444445689999999999999899999999999999999999999997532 223344455554433321
Q ss_pred hHHHHHHHHHHHhhccCcCCCC
Q 047576 581 VIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 581 ~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+|+++||++
T Consensus 247 ---~~~~~~~li~~lL~~dP~~ 265 (353)
T 3txo_A 247 ---LHEDATGILKSFMTKNPTM 265 (353)
T ss_dssp ---SCHHHHHHHHHHTCSSGGG
T ss_pred ---CCHHHHHHHHHHhhhCHHH
Confidence 1223778999999999974
No 29
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.9e-34 Score=298.19 Aligned_cols=217 Identities=20% Similarity=0.310 Sum_probs=169.6
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHH------------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVL------------------------ 422 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il------------------------ 422 (602)
.++|.....||+|+||.||+|+.. +|+.||+|++++.........+.+..|..++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 467999999999999999999875 5889999999765433233345667777777
Q ss_pred --HhhhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 423 --SQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 423 --~~l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
||+++|+|.+++.. ...+++.++..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 99 v~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 44555566655543 235899999999999999999999 7899999999999999999999999999998654
Q ss_pred CCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChh
Q 047576 501 ADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRK 580 (602)
Q Consensus 501 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 580 (602)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+....+..+..
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-------~~~~~~~i~~~~~~~p~~-- 243 (353)
T 2i0e_A 173 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-------EDELFQSIMEHNVAYPKS-- 243 (353)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCCCTT--
T ss_pred cCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC-------HHHHHHHHHhCCCCCCCC--
Confidence 44444455689999999999999999999999999999999999999997432 122334444444432211
Q ss_pred hHHHHHHHHHHHhhccCcCCCC
Q 047576 581 VIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 581 ~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+|+++||++
T Consensus 244 ---~s~~~~~li~~lL~~dP~~ 262 (353)
T 2i0e_A 244 ---MSKEAVAICKGLMTKHPGK 262 (353)
T ss_dssp ---SCHHHHHHHHHHTCSCTTS
T ss_pred ---CCHHHHHHHHHHhhcCHHH
Confidence 1234788999999999975
No 30
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.2e-33 Score=288.08 Aligned_cols=227 Identities=31% Similarity=0.494 Sum_probs=174.2
Q ss_pred CCccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHH-----------------------
Q 047576 367 TPRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLS----------------------- 423 (602)
Q Consensus 367 ~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~----------------------- 423 (602)
.+++|+....||+|+||.||+|+..+|+.||||++...... ..+.+.+|+.++.
T Consensus 37 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (321)
T 2qkw_B 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQ---GIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILI 113 (321)
T ss_dssp CCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSS---HHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEE
T ss_pred HHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChH---HHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 46789999999999999999999888999999988765432 2456778888774
Q ss_pred --hhhcCcccccccccc-chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 424 --QMERGSLFRILHNDA-EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 424 --~l~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
|+++|+|.+++.... ....+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 114 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 190 (321)
T 2qkw_B 114 YKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGT 190 (321)
T ss_dssp EECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTCEECS
T ss_pred EEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence 445556655554322 1234899999999999999999999 7899999999999999999999999999998654
Q ss_pred CCC--CCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCC--------Ccccchhhhhc
Q 047576 501 ADS--SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY--------DPKIMLIDVLD 570 (602)
Q Consensus 501 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~--------~~~~~~~~~~d 570 (602)
... .......||+.|+|||++.+..++.++||||||+++|||+||+.||....+..... .....+..+++
T Consensus 191 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (321)
T 2qkw_B 191 ELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVD 270 (321)
T ss_dssp SSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSS
T ss_pred cccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcC
Confidence 321 12233568999999999999999999999999999999999999997543221100 00112334455
Q ss_pred cCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 571 QRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 571 ~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
+.+..... .+....+.+++.+||+.||++
T Consensus 271 ~~~~~~~~---~~~~~~l~~li~~~l~~dP~~ 299 (321)
T 2qkw_B 271 PNLADKIR---PESLRKFGDTAVKCLALSSED 299 (321)
T ss_dssp SSCTTCSC---HHHHHHHHHHHHHHTCSSGGG
T ss_pred hhhccccC---HHHHHHHHHHHHHHcCCCccc
Confidence 55544443 346677999999999999974
No 31
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.5e-33 Score=293.83 Aligned_cols=227 Identities=21% Similarity=0.315 Sum_probs=168.7
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh-hcCccccccccc--------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM-ERGSLFRILHND-------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l-~~gsL~~~l~~~-------- 437 (602)
.++|...+.||+|+||.||+|+.. +++.||+|++.+.........+.+.+|..++..+ .|+++..++...
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 467999999999999999999865 6899999999765443334456677888887554 455544432210
Q ss_pred --------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCC
Q 047576 438 --------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS 503 (602)
Q Consensus 438 --------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~ 503 (602)
.....+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 88 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 01234889999999999999999999 7899999999999999999999999999998654333
Q ss_pred CCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccC--CCcccchhhhhccCCCCCCChhh
Q 047576 504 SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSS--YDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 504 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~--~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||......... .........+.......+..
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~--- 241 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS--- 241 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTT---
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCC---
Confidence 3445568999999999999999999999999999999999999999743211111 11111223333433332211
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+|+++||++
T Consensus 242 --~s~~~~~li~~lL~~dP~~ 260 (345)
T 3a8x_A 242 --LSVKAASVLKSFLNKDPKE 260 (345)
T ss_dssp --SCHHHHHHHHHHTCSSTTT
T ss_pred --CCHHHHHHHHHHhcCCHhH
Confidence 1234788999999999975
No 32
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.3e-33 Score=289.60 Aligned_cols=220 Identities=28% Similarity=0.423 Sum_probs=156.6
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh----------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM---------------------- 425 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l---------------------- 425 (602)
..+|+..+.||+|+||.||+|+. +|+.||||++...... ....+.+.+|+.++..+
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFH-AERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCS-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 45788899999999999999987 6889999998765432 22356788899988544
Q ss_pred ---hcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCC--eEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 426 ---ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS--VVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 426 ---~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
++|+|.+++........+++.++..++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 44555555544333445899999999999999999999 778 9999999999999999999999999998655
Q ss_pred CCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChh
Q 047576 501 ADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRK 580 (602)
Q Consensus 501 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 580 (602)
..........||+.|+|||++.+..++.++||||||+++|||+||+.||..... ......+.......+....
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~-------~~~~~~~~~~~~~~~~~~~ 263 (309)
T 3p86_A 191 STFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP-------AQVVAAVGFKCKRLEIPRN 263 (309)
T ss_dssp -----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH-------HHHHHHHHHSCCCCCCCTT
T ss_pred ccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhcCCCCCCCcc
Confidence 443334446799999999999999999999999999999999999999975322 1111111111111111111
Q ss_pred hHHHHHHHHHHHhhccCcCCCC
Q 047576 581 VIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 581 ~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++..||+.||++
T Consensus 264 ---~~~~l~~li~~~l~~dP~~ 282 (309)
T 3p86_A 264 ---LNPQVAAIIEGCWTNEPWK 282 (309)
T ss_dssp ---SCHHHHHHHHHHTCSSGGG
T ss_pred ---CCHHHHHHHHHHccCChhh
Confidence 2234789999999999974
No 33
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.3e-33 Score=291.35 Aligned_cols=230 Identities=32% Similarity=0.554 Sum_probs=174.4
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhh---------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME--------------------- 426 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~--------------------- 426 (602)
.++|...+.||+|+||.||+|+..+|+.||||++...... .....+.+|+.++..+.
T Consensus 29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 106 (326)
T 3uim_A 29 SDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 106 (326)
T ss_dssp TTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEE
T ss_pred hhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc--hHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEE
Confidence 5789999999999999999999888999999999765432 12346778888774444
Q ss_pred ----cCcccccccccc-chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 427 ----RGSLFRILHNDA-EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 427 ----~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
+|+|.+++.... ....+++..+..++.|++.||+|||+.+..+|+||||||+||+++.++.+||+|||++.....
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 186 (326)
T 3uim_A 107 PYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 186 (326)
T ss_dssp ECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCS
T ss_pred EeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCc
Confidence 445554444322 123489999999999999999999954344999999999999999999999999999987654
Q ss_pred CCCC-ccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCccc----------ccCCCcccchhhhhc
Q 047576 502 DSSN-QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTL----------SSSYDPKIMLIDVLD 570 (602)
Q Consensus 502 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~----------~~~~~~~~~~~~~~d 570 (602)
.... .....||+.|+|||++.+..++.++||||+|+++|+|+||+.||+..... ............+++
T Consensus 187 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (326)
T 3uim_A 187 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVD 266 (326)
T ss_dssp SSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSC
T ss_pred ccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcC
Confidence 3322 33346999999999999989999999999999999999999999632110 011222333455666
Q ss_pred cCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 571 QRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 571 ~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
..+...... +....+.+++..||+.||++
T Consensus 267 ~~~~~~~~~---~~~~~l~~li~~cl~~dP~~ 295 (326)
T 3uim_A 267 VDLQGNYKD---EEVEQLIQVALLCTQSSPME 295 (326)
T ss_dssp TTCTTSCCH---HHHHHHHHHHHHHTCSCGGG
T ss_pred hhhccccCH---HHHHHHHHHHHHHhCcCCcc
Confidence 666655543 46677999999999999974
No 34
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.1e-33 Score=294.69 Aligned_cols=217 Identities=22% Similarity=0.316 Sum_probs=165.4
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHH------------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVL------------------------ 422 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il------------------------ 422 (602)
.++|...+.||+|+||.||+|+.. +|+.||+|++++.........+.+..|..++
T Consensus 16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~l 95 (345)
T 1xjd_A 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF 95 (345)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEE
Confidence 568999999999999999999874 6899999999755332222334566677766
Q ss_pred --HhhhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 423 --SQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 423 --~~l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
||+++|+|.+++.. ...+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 96 v~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 169 (345)
T 1xjd_A 96 VMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENM 169 (345)
T ss_dssp EEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhcc
Confidence 34445555555432 234889999999999999999999 7899999999999999999999999999998654
Q ss_pred CCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChh
Q 047576 501 ADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRK 580 (602)
Q Consensus 501 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 580 (602)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+. .
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~~~~~p~--~ 240 (345)
T 1xjd_A 170 LGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-------EELFHSIRMDNPFYPR--W 240 (345)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCCCCCCT--T
T ss_pred cCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH-------HHHHHHHHhCCCCCCc--c
Confidence 433344556899999999999999999999999999999999999999975321 1222233322222111 1
Q ss_pred hHHHHHHHHHHHhhccCcCCCC
Q 047576 581 VIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 581 ~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+|++.||++
T Consensus 241 ---~s~~~~~li~~lL~~dp~~ 259 (345)
T 1xjd_A 241 ---LEKEAKDLLVKLFVREPEK 259 (345)
T ss_dssp ---SCHHHHHHHHHHSCSSGGG
T ss_pred ---cCHHHHHHHHHHhcCCHhH
Confidence 1234788999999999974
No 35
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.5e-33 Score=287.07 Aligned_cols=226 Identities=28% Similarity=0.483 Sum_probs=212.2
Q ss_pred CCCccchhccccCCccc--cCCccCCCCCCCCEEECcC-CcCcc-------cCCCcCEEECcCCcCCCCCchhhhCCCCC
Q 047576 129 PNLESLRILAYYDGFTG--SIPSEISALSKLQLLDLSS-NRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLKNL 198 (602)
Q Consensus 129 ~~L~~L~l~~~~~~~~~--~ip~~l~~L~~L~~L~Ls~-N~i~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 198 (602)
.+++.|++. ++++.+ .+|+.|+++++|++|+|++ |++.+ .+++|++|+|++|++++.+|..|+++++|
T Consensus 50 ~~l~~L~L~--~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L 127 (313)
T 1ogq_A 50 YRVNNLDLS--GLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127 (313)
T ss_dssp CCEEEEEEE--CCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTC
T ss_pred ceEEEEECC--CCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCC
Confidence 356667766 677888 8999999999999999995 88874 47899999999999999999999999999
Q ss_pred CEEEecCCCCCCCCcccccCcCCCceeecccccCCC-CcccccCCC-CCcEEEccCCCCCCCCCCccCCCCCCccccCCC
Q 047576 199 IELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSG-LPQEIGNLK-NLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSC 276 (602)
Q Consensus 199 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-ip~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 276 (602)
++|+|++|++++.+|..+..+++|++|+|++|++++ +|..+++++ +|++|++++|++++.+|..+..++ |++|++++
T Consensus 128 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~ 206 (313)
T 1ogq_A 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSR 206 (313)
T ss_dssp CEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCS
T ss_pred CEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcC
Confidence 999999999999999999999999999999999997 999999998 999999999999999999999997 99999999
Q ss_pred CcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccC
Q 047576 277 NQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVP 356 (602)
Q Consensus 277 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 356 (602)
|.+++.+|..+..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|+.|++++|+++|.+|
T Consensus 207 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp SEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred CcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCC
Confidence 999999999999999999999999999987776 8889999999999999999999999999999999999999999999
Q ss_pred CC
Q 047576 357 YS 358 (602)
Q Consensus 357 ~~ 358 (602)
..
T Consensus 286 ~~ 287 (313)
T 1ogq_A 286 QG 287 (313)
T ss_dssp CS
T ss_pred CC
Confidence 76
No 36
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.98 E-value=4.1e-33 Score=287.11 Aligned_cols=214 Identities=25% Similarity=0.319 Sum_probs=167.0
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccc--------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFR-------------- 432 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~-------------- 432 (602)
.++|...+.||+|+||.||+|+.. +|+.||+|++++.........+.+.+|+.++..+.|+++..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 467899999999999999999864 78999999997654333334456778888885555555444
Q ss_pred -----------ccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 433 -----------ILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 433 -----------~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
++.. ...+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp ECCCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred EeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 3332 234788999999999999999999 88999999999999999999999999999987543
Q ss_pred CCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhh
Q 047576 502 DSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
. .....||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......++...+..+..
T Consensus 159 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-------~~~~~~~i~~~~~~~p~~--- 225 (318)
T 1fot_A 159 V---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN-------TMKTYEKILNAELRFPPF--- 225 (318)
T ss_dssp C---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-------HHHHHHHHHHCCCCCCTT---
T ss_pred c---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhCCCCCCCC---
Confidence 2 233579999999999999999999999999999999999999997432 122334444444432211
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+|++.||++
T Consensus 226 --~~~~~~~li~~lL~~dp~~ 244 (318)
T 1fot_A 226 --FNEDVKDLLSRLITRDLSQ 244 (318)
T ss_dssp --SCHHHHHHHHHHTCSCTTT
T ss_pred --CCHHHHHHHHHHhccCHHH
Confidence 1233788999999999975
No 37
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.98 E-value=4.4e-33 Score=284.05 Aligned_cols=219 Identities=24% Similarity=0.344 Sum_probs=166.4
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc--------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA-------- 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~-------- 438 (602)
..+|...+.||+|+||.||+|+. .+|+.||||++...... ..+.+.+|+.++..+.|+++..++....
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc---HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 46799999999999999999985 57899999998644332 2345778888886666666555433110
Q ss_pred -------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCC
Q 047576 439 -------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 505 (602)
Q Consensus 439 -------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~ 505 (602)
....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.........
T Consensus 96 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 172 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (297)
T ss_dssp EECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred EECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc
Confidence 1223788999999999999999999 789999999999999999999999999999877655555
Q ss_pred ccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCC-CCCCChhhHHH
Q 047576 506 QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRL-PPPVDRKVIQD 584 (602)
Q Consensus 506 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~~ 584 (602)
.....||+.|+|||++.+..++.++||||+||++|||+||+.||...... .....+..... ....... .
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~~~~---~ 242 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-------RALYLIATNGTPELQNPEK---L 242 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHHCSCCCSCGGG---S
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCCCCCCCCccc---c
Confidence 55568999999999999999999999999999999999999999753221 11111111111 1111111 2
Q ss_pred HHHHHHHHhhccCcCCCC
Q 047576 585 ILLVSTISFACLQSNPKS 602 (602)
Q Consensus 585 ~~~l~~l~~~Cl~~dP~e 602 (602)
...+.+++.+||+.||++
T Consensus 243 ~~~~~~li~~~l~~dp~~ 260 (297)
T 3fxz_A 243 SAIFRDFLNRCLEMDVEK 260 (297)
T ss_dssp CHHHHHHHHHHSCSSTTT
T ss_pred CHHHHHHHHHHccCChhH
Confidence 334789999999999975
No 38
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.98 E-value=5.1e-33 Score=314.15 Aligned_cols=217 Identities=20% Similarity=0.310 Sum_probs=172.6
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHH------------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVL------------------------ 422 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il------------------------ 422 (602)
..+|.....||+|+||.||+|+.. +++.||||++++.........+.+..|..++
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 457888999999999999999864 6889999998755433333345566677766
Q ss_pred --HhhhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 423 --SQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 423 --~~l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
||+++|+|..++.. ...+++.+++.|+.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 420 V~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEeCcCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 56666777766654 245899999999999999999999 7899999999999999999999999999998754
Q ss_pred CCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChh
Q 047576 501 ADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRK 580 (602)
Q Consensus 501 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 580 (602)
..........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ....+..++...+..+..
T Consensus 494 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~-------~~~~~~~i~~~~~~~p~~-- 564 (674)
T 3pfq_A 494 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-------EDELFQSIMEHNVAYPKS-- 564 (674)
T ss_dssp CTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHSSCCCCCTT--
T ss_pred cCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC-------HHHHHHHHHhCCCCCCcc--
Confidence 44444555789999999999999999999999999999999999999997532 233345555555443321
Q ss_pred hHHHHHHHHHHHhhccCcCCCC
Q 047576 581 VIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 581 ~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++..|+++||++
T Consensus 565 ---~s~~~~~li~~lL~~dP~~ 583 (674)
T 3pfq_A 565 ---MSKEAVAICKGLMTKHPGK 583 (674)
T ss_dssp ---SCHHHHHHHHHHSCSSSTT
T ss_pred ---CCHHHHHHHHHHccCCHHH
Confidence 2234789999999999975
No 39
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.98 E-value=1.2e-32 Score=282.39 Aligned_cols=220 Identities=27% Similarity=0.458 Sum_probs=166.7
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|...+.||+|+||.||+|+.. +++.||+|++...... ..+.+.+|++++..+.|+++..++...
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEE---TQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHH---HHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHH---HHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEE
Confidence 568899999999999999999864 6899999988654332 456788999998666555554433210
Q ss_pred --------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCC
Q 047576 438 --------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS 503 (602)
Q Consensus 438 --------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~ 503 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp EECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred EEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 01245889999999999999999999 7899999999999999999999999999998764332
Q ss_pred CCc--------------cccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhh
Q 047576 504 SNQ--------------TLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVL 569 (602)
Q Consensus 504 ~~~--------------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~ 569 (602)
... ....||+.|+|||++.+..++.++||||||+++|||++|..||........ ..........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~--~~~~~~~~~~ 240 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTM--DFGLNVRGFL 240 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCT--TSSBCHHHHH
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHH--HHhhhhhccc
Confidence 211 135699999999999999999999999999999999999999875432211 1122233444
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 570 DQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 570 d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
+...+...++ .+.+++.+||+.||++
T Consensus 241 ~~~~~~~~~~-------~l~~li~~~l~~dP~~ 266 (310)
T 3s95_A 241 DRYCPPNCPP-------SFFPITVRCCDLDPEK 266 (310)
T ss_dssp HHTCCTTCCT-------THHHHHHHHTCSSGGG
T ss_pred cccCCCCCCH-------HHHHHHHHHccCChhh
Confidence 4444433332 2778999999999974
No 40
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.98 E-value=2.1e-33 Score=295.54 Aligned_cols=217 Identities=25% Similarity=0.315 Sum_probs=161.7
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHH------------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVL------------------------ 422 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il------------------------ 422 (602)
.++|...+.||+|+||.||+|+.. +++.||+|++++...........+.+|..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 468999999999999999999875 6889999998765433223334455555542
Q ss_pred --HhhhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 423 --SQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 423 --~~l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
||+++|+|.+++.. ...+++.++..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 117 v~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 55666666666543 334788999999999999999999 7899999999999999999999999999998754
Q ss_pred CCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChh
Q 047576 501 ADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRK 580 (602)
Q Consensus 501 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 580 (602)
..........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......++...+..+..
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-------~~~~~~i~~~~~~~~~~-- 261 (373)
T 2r5t_A 191 EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-------AEMYDNILNKPLQLKPN-- 261 (373)
T ss_dssp CCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-------HHHHHHHHHSCCCCCSS--
T ss_pred cCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-------HHHHHHHHhcccCCCCC--
Confidence 444444556899999999999999999999999999999999999999974321 22334444444332211
Q ss_pred hHHHHHHHHHHHhhccCcCCCC
Q 047576 581 VIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 581 ~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+|+++||++
T Consensus 262 ---~~~~~~~li~~lL~~dp~~ 280 (373)
T 2r5t_A 262 ---ITNSARHLLEGLLQKDRTK 280 (373)
T ss_dssp ---SCHHHHHHHHHHTCSSGGG
T ss_pred ---CCHHHHHHHHHHcccCHHh
Confidence 1223778999999999974
No 41
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.98 E-value=2.1e-31 Score=287.67 Aligned_cols=234 Identities=25% Similarity=0.309 Sum_probs=149.8
Q ss_pred CCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc---------cCCCcCEEECcCCcCCCCCchh-hhC
Q 047576 125 FSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG---------RLTNLNYMSLSRNMLGGLLPQE-IGN 194 (602)
Q Consensus 125 ~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~---------~l~~L~~L~L~~N~l~~~~p~~-~~~ 194 (602)
|+.+++|+.|++. ++.+.+..|..|+++++|++|+|++|++++ .+++|++|+|++|++++..|.. +++
T Consensus 75 ~~~l~~L~~L~Ls--~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 152 (455)
T 3v47_A 75 FRGLSSLIILKLD--YNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLN 152 (455)
T ss_dssp TTTCTTCCEEECT--TCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGG
T ss_pred ccccccCCEEeCC--CCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCC
Confidence 3444444444444 344444555566666666666666666542 2556666666666666665554 566
Q ss_pred CCCCCEEEecCCCCCCCCcccccCc----------------------------------CCCceeecccccCCC-Ccccc
Q 047576 195 LKNLIELDVGDNSLIGPIPLTLSRL----------------------------------TSLKILILAQNQLSG-LPQEI 239 (602)
Q Consensus 195 l~~L~~L~L~~N~l~~~~p~~l~~l----------------------------------~~L~~L~L~~N~l~~-ip~~~ 239 (602)
+++|++|+|++|++++..|..+..+ ++|++|++++|++++ +|..+
T Consensus 153 l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~ 232 (455)
T 3v47_A 153 MRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRF 232 (455)
T ss_dssp CTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHH
T ss_pred CCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhh
Confidence 6666666666666666555544333 345555555554443 22211
Q ss_pred cC---------------------------------------CCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCC
Q 047576 240 GN---------------------------------------LKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFN 280 (602)
Q Consensus 240 ~~---------------------------------------l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 280 (602)
.. .++|+.|++++|++++.+|..++.+++|++|+|++|+++
T Consensus 233 ~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 312 (455)
T 3v47_A 233 FDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEIN 312 (455)
T ss_dssp HHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred hccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCccc
Confidence 11 145666666666776667777777778888888888887
Q ss_pred CCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccCCCCC
Q 047576 281 SSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYSNK 360 (602)
Q Consensus 281 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~ 360 (602)
+..|..|..+++|++|+|++|++++..|..+..+++|+.|+|++|++++..|..+..+++|++|++++|++++..+..+.
T Consensus 313 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 392 (455)
T 3v47_A 313 KIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFD 392 (455)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred ccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhc
Confidence 77777777777888888888887776677777777888888888887777777777777788888888877765554433
No 42
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.98 E-value=4.7e-33 Score=290.57 Aligned_cols=214 Identities=21% Similarity=0.283 Sum_probs=167.8
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccc---------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLF--------------- 431 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~--------------- 431 (602)
.++|...+.||+|+||.||+|+.. +|+.||+|++...........+.+.+|+.++..+.|+.+.
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 568999999999999999999864 6899999998765443333456778899988555554444
Q ss_pred ----------cccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 432 ----------RILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 432 ----------~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
+++.. ...+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EECCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccC
Confidence 43332 234789999999999999999999 78999999999999999999999999999987643
Q ss_pred CCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhh
Q 047576 502 DSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
. .....||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+....+..+..
T Consensus 194 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-------~~~~~~~i~~~~~~~p~~--- 260 (350)
T 1rdq_E 194 R---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ-------PIQIYEKIVSGKVRFPSH--- 260 (350)
T ss_dssp C---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCCCTT---
T ss_pred C---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC-------HHHHHHHHHcCCCCCCCC---
Confidence 2 233579999999999999999999999999999999999999997432 122233444444332211
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+|++.||++
T Consensus 261 --~~~~~~~li~~lL~~dp~~ 279 (350)
T 1rdq_E 261 --FSSDLKDLLRNLLQVDLTK 279 (350)
T ss_dssp --CCHHHHHHHHHHSCSCTTT
T ss_pred --CCHHHHHHHHHHhhcCHHh
Confidence 1234789999999999975
No 43
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.98 E-value=1.8e-33 Score=286.41 Aligned_cols=225 Identities=22% Similarity=0.321 Sum_probs=161.8
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|...+.||+|+||.||+|+. .+++.||+|++...........+.+.+|+.++..+.|+++..++...
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 46799999999999999999985 46899999988654433344567888999988666665554433211
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS 504 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~ 504 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 90 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 01234789999999999999999999 78999999999999999999999999999987654322
Q ss_pred -CccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHH
Q 047576 505 -NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQ 583 (602)
Q Consensus 505 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 583 (602)
......||+.|+|||++.+..++.++||||+|+++|+|+||+.||...... ......+....+.........
T Consensus 167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 239 (294)
T 4eqm_A 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV-------SIAIKHIQDSVPNVTTDVRKD 239 (294)
T ss_dssp --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH-------HHHHHHHSSCCCCHHHHSCTT
T ss_pred cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhhccCCCcchhcccC
Confidence 223356999999999999999999999999999999999999999753321 111112222211110000001
Q ss_pred HHHHHHHHHhhccCcCCCC
Q 047576 584 DILLVSTISFACLQSNPKS 602 (602)
Q Consensus 584 ~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+|+++||++
T Consensus 240 ~~~~l~~li~~~l~~dp~~ 258 (294)
T 4eqm_A 240 IPQSLSNVILRATEKDKAN 258 (294)
T ss_dssp SCHHHHHHHHHHSCSSGGG
T ss_pred CCHHHHHHHHHHhcCCHhH
Confidence 2234788999999999964
No 44
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.98 E-value=8.3e-33 Score=291.73 Aligned_cols=222 Identities=23% Similarity=0.353 Sum_probs=167.7
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|.....||+|+||.||+|+.. +++.||+|++...........+.+.+|+.++..+.|+++..++...
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 467999999999999999999864 6889999998765444334456788899999777776665543211
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS 504 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~ 504 (602)
.....+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 94 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 169 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET- 169 (384)
T ss_dssp ECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC-
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC-
Confidence 01234889999999999999999999 7899999999999999999999999999998765432
Q ss_pred Ccccccccccccccccccc---CcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhh
Q 047576 505 NQTLLAGSYGYIAPELAYT---MVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 505 ~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... .........+.......+. .
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~----~~~~~~~~~~~~~~~~~p~--~- 242 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS----TSSKEIVHTFETTVVTYPS--A- 242 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT----SCHHHHHHHHHHCCCCCCT--T-
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCC----ccHHHHHHHHhhcccCCCC--c-
Confidence 3344679999999999874 4588999999999999999999999974321 1111112222222222221 1
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+||+.||++
T Consensus 243 --~s~~~~~li~~lL~~dP~~ 261 (384)
T 4fr4_A 243 --WSQEMVSLLKKLLEPNPDQ 261 (384)
T ss_dssp --SCHHHHHHHHHHSCSSGGG
T ss_pred --CCHHHHHHHHHHhcCCHhH
Confidence 2234789999999999974
No 45
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.98 E-value=6.3e-33 Score=287.01 Aligned_cols=219 Identities=21% Similarity=0.299 Sum_probs=168.5
Q ss_pred CCccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc--------
Q 047576 367 TPRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND-------- 437 (602)
Q Consensus 367 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~-------- 437 (602)
...+|...+.||+|+||.||+|+. .+|+.||||++...... ....+.+.+|+.++..+.|+++..++...
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-PTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 456899999999999999999986 57999999998655432 22456788899999776666655543211
Q ss_pred --------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCC
Q 047576 438 --------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS 503 (602)
Q Consensus 438 --------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~ 503 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 92 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp EECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred EEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence 01234788999999999999999999 7899999999999999999999999999998765432
Q ss_pred CCccccccccccccccccccCcCC-ccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhH
Q 047576 504 SNQTLLAGSYGYIAPELAYTMVMT-EKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVI 582 (602)
Q Consensus 504 ~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 582 (602)
......||+.|+|||++.+..++ .++||||+||++|+|+||+.||+.... ......+.......+..
T Consensus 169 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~i~~~~~~~p~~---- 236 (328)
T 3fe3_A 169 -KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL-------KELRERVLRGKYRIPFY---- 236 (328)
T ss_dssp -GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCCCCCCTT----
T ss_pred -ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCCCCCC----
Confidence 23446799999999999888765 789999999999999999999975321 22223333333332221
Q ss_pred HHHHHHHHHHhhccCcCCCC
Q 047576 583 QDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 583 ~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+|++.||++
T Consensus 237 -~s~~~~~li~~~L~~dP~~ 255 (328)
T 3fe3_A 237 -MSTDCENLLKRFLVLNPIK 255 (328)
T ss_dssp -SCHHHHHHHHHHCCSSTTT
T ss_pred -CCHHHHHHHHHHCCCChhH
Confidence 1233778999999999975
No 46
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.98 E-value=1.1e-33 Score=303.20 Aligned_cols=218 Identities=27% Similarity=0.330 Sum_probs=165.0
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHH------------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVL------------------------ 422 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il------------------------ 422 (602)
.++|...+.||+|+||+||+|+.. +++.||+|++.+.........+.+.+|+.++
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 152 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV 152 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEE
Confidence 578999999999999999999875 5889999999754433333344577888877
Q ss_pred -HhhhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 423 -SQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 423 -~~l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 153 ~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~ 227 (437)
T 4aw2_A 153 MDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 227 (437)
T ss_dssp ECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhhhhccc
Confidence 556667777766542 345899999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCC-ccccccccccccccccc-----cCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhcc----
Q 047576 502 DSSN-QTLLAGSYGYIAPELAY-----TMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ---- 571 (602)
Q Consensus 502 ~~~~-~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~---- 571 (602)
+... .....||+.|+|||++. ...++.++|||||||++|||+||+.||..... ......+++.
T Consensus 228 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~-------~~~~~~i~~~~~~~ 300 (437)
T 4aw2_A 228 DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL-------VETYGKIMNHKERF 300 (437)
T ss_dssp TSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHTHHHHC
T ss_pred CCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh-------hHHHHhhhhccccc
Confidence 3322 23357999999999987 45689999999999999999999999975321 1222233221
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhccCcCCC
Q 047576 572 RLPPPVDRKVIQDILLVSTISFACLQSNPK 601 (602)
Q Consensus 572 ~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~ 601 (602)
.++... .. ....+.+++.+|+..+|+
T Consensus 301 ~~p~~~-~~---~s~~~~dLi~~lL~~~~~ 326 (437)
T 4aw2_A 301 QFPTQV-TD---VSENAKDLIRRLICSREH 326 (437)
T ss_dssp CCCSSC-CC---SCHHHHHHHHTTSSCGGG
T ss_pred cCCccc-cc---CCHHHHHHHHHHhccccc
Confidence 122110 01 122377888898877664
No 47
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.98 E-value=1.8e-33 Score=299.48 Aligned_cols=218 Identities=25% Similarity=0.336 Sum_probs=164.9
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHH------------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVL------------------------ 422 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il------------------------ 422 (602)
.++|...+.||+|+||.||+|+.. +|+.||+|++++.........+.+.+|..++
T Consensus 60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 139 (412)
T 2vd5_A 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLV 139 (412)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence 578999999999999999999874 7999999999765443333456688888877
Q ss_pred -HhhhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 423 -SQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 423 -~~l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
||+++|+|.+++... ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 140 mE~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~ 214 (412)
T 2vd5_A 140 MEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRA 214 (412)
T ss_dssp ECCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EcCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhheeccC
Confidence 455566666666432 235899999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCC-ccccccccccccccccc-------cCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhcc--
Q 047576 502 DSSN-QTLLAGSYGYIAPELAY-------TMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ-- 571 (602)
Q Consensus 502 ~~~~-~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~-- 571 (602)
.... .....||+.|+|||++. +..++.++|||||||++|||++|+.||..... ......++..
T Consensus 215 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-------~~~~~~i~~~~~ 287 (412)
T 2vd5_A 215 DGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST-------AETYGKIVHYKE 287 (412)
T ss_dssp TSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHTHHH
T ss_pred CCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH-------HHHHHHHHhccc
Confidence 4332 22357999999999987 35689999999999999999999999975321 1222233321
Q ss_pred CCCCC-CChhhHHHHHHHHHHHhhccCcCCC
Q 047576 572 RLPPP-VDRKVIQDILLVSTISFACLQSNPK 601 (602)
Q Consensus 572 ~l~~~-~~~~~~~~~~~l~~l~~~Cl~~dP~ 601 (602)
.+..+ .... ....+.+++.+|++ +|+
T Consensus 288 ~~~~p~~~~~---~s~~~~dli~~lL~-~p~ 314 (412)
T 2vd5_A 288 HLSLPLVDEG---VPEEARDFIQRLLC-PPE 314 (412)
T ss_dssp HCCCC----C---CCHHHHHHHHTTSS-CGG
T ss_pred CcCCCccccC---CCHHHHHHHHHHcC-Chh
Confidence 11111 0111 22347889999998 875
No 48
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.98 E-value=7.3e-33 Score=303.66 Aligned_cols=224 Identities=23% Similarity=0.325 Sum_probs=171.4
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHH-----------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLS----------------------- 423 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~----------------------- 423 (602)
.++|...+.||+|+||.||+|+.. +|+.||+|++.+.........+.+.+|+.++.
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 467888999999999999999874 69999999997654443334566788888884
Q ss_pred --hhhcCccccccccccc-hhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 424 --QMERGSLFRILHNDAE-AVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 424 --~l~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
|+++|+|..++..... ...+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 4455555555443221 235899999999999999999999 7899999999999999999999999999998776
Q ss_pred CCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChh
Q 047576 501 ADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRK 580 (602)
Q Consensus 501 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 580 (602)
..........||+.|+|||++.+..++.++||||+||++|||+||+.||..... ..........+.+.....+. .
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~---~~~~~~~~~~i~~~~~~~p~--~ 415 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE---KVENKELKQRVLEQAVTYPD--K 415 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTC---CCCHHHHHHHHHHCCCCCCT--T
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCcc---chhHHHHHHHHhhcccCCCc--c
Confidence 544444446899999999999999999999999999999999999999975321 11112222334444333221 1
Q ss_pred hHHHHHHHHHHHhhccCcCCCC
Q 047576 581 VIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 581 ~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+|+++||++
T Consensus 416 ---~s~~~~~li~~lL~~dP~~ 434 (543)
T 3c4z_A 416 ---FSPASKDFCEALLQKDPEK 434 (543)
T ss_dssp ---SCHHHHHHHHHHSCSSGGG
T ss_pred ---cCHHHHHHHHHhccCCHhH
Confidence 1234778999999999974
No 49
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.97 E-value=1.4e-32 Score=280.00 Aligned_cols=221 Identities=26% Similarity=0.402 Sum_probs=157.2
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHh--hhcC-----------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQ--MERG----------------- 428 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~--l~~g----------------- 428 (602)
.++|...+.||+|+||.||+|+. +++.||||++..... ..+..|.+++.. +.|+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~------~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDE------KSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGGH------HHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccccc------hhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 56899999999999999999988 789999999865432 233445554433 3444
Q ss_pred ------------ccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhc-----CCCCeEEeCCCCCCeeeCCCCcceee
Q 047576 429 ------------SLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHD-----CSPSVVHRDISSNNILLNSKLEAFVA 491 (602)
Q Consensus 429 ------------sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-----~~~~ivH~DLkp~NILld~~~~~kL~ 491 (602)
+|.++++ ...+++..+..++.|++.||+|||.. ++++|+||||||+||+++.++.+||+
T Consensus 80 ~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 155 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIA 155 (301)
T ss_dssp EEEEEECCCTTCBHHHHHT----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEEC
T ss_pred eeEEehhhccCCCHHHHHh----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEe
Confidence 4444442 23488999999999999999999932 15699999999999999999999999
Q ss_pred cccccccccCCCCC----ccccccccccccccccccC------cCCccchhHHHHHHHHHHHcC----------CCCCCC
Q 047576 492 DFGTARLLHADSSN----QTLLAGSYGYIAPELAYTM------VMTEKYDVYSFGVVTLEVLMG----------KHPRDL 551 (602)
Q Consensus 492 DFG~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltG----------~~Pf~~ 551 (602)
|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||+|| +.||..
T Consensus 156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~ 235 (301)
T 3q4u_A 156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD 235 (301)
T ss_dssp CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence 99999876543322 1224799999999998876 456799999999999999999 777754
Q ss_pred CcccccCCCcccchhhhhc-cCCCCCCC--hhhHHHHHHHHHHHhhccCcCCCC
Q 047576 552 HSTLSSSYDPKIMLIDVLD-QRLPPPVD--RKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~d-~~l~~~~~--~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....... .......+. ....+... .........+.+++..||+.||++
T Consensus 236 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 286 (301)
T 3q4u_A 236 VVPNDPS---FEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSA 286 (301)
T ss_dssp TSCSSCC---HHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGG
T ss_pred cCCCCcc---hhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhh
Confidence 3211111 111111111 11111111 111235567999999999999974
No 50
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.97 E-value=2.8e-32 Score=277.85 Aligned_cols=222 Identities=20% Similarity=0.273 Sum_probs=163.4
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHH-----------------------HHHhhhhHhHHHHHH
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEE-----------------------LAFIRSFRNEAQVLS 423 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~-----------------------~~~~~~~~~E~~il~ 423 (602)
.++|...+.||+|+||.||+|+. .+++.||||++....... ....+.+.+|++++.
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46799999999999999999986 468999999986543211 112456889999998
Q ss_pred hhhcCccccccccc-----------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCe
Q 047576 424 QMERGSLFRILHND-----------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480 (602)
Q Consensus 424 ~l~~gsL~~~l~~~-----------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NI 480 (602)
.+.|+++..++... .....+++.++..++.|++.||+||| +.+|+||||||+||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Ni 168 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNL 168 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGE
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHE
Confidence 88877766554321 01234889999999999999999999 78999999999999
Q ss_pred eeCCCCcceeecccccccccCCCCCccccccccccccccccccCc---CCccchhHHHHHHHHHHHcCCCCCCCCccccc
Q 047576 481 LLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV---MTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSS 557 (602)
Q Consensus 481 Lld~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~ 557 (602)
+++.++.+||+|||++..............||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.....
T Consensus 169 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--- 245 (298)
T 2zv2_A 169 LVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI--- 245 (298)
T ss_dssp EECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH---
T ss_pred EECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH---
Confidence 999999999999999987755443344467999999999988765 47889999999999999999999974321
Q ss_pred CCCcccchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 558 SYDPKIMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 558 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
......+.......+.... ....+.+++.+||+.||++
T Consensus 246 ----~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~ 283 (298)
T 2zv2_A 246 ----MCLHSKIKSQALEFPDQPD---IAEDLKDLITRMLDKNPES 283 (298)
T ss_dssp ----HHHHHHHHHCCCCCCSSSC---CCHHHHHHHHHHTCSCTTT
T ss_pred ----HHHHHHHhcccCCCCCccc---cCHHHHHHHHHHhhcChhh
Confidence 1111222222222221111 2234789999999999985
No 51
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.97 E-value=3.7e-33 Score=301.10 Aligned_cols=217 Identities=23% Similarity=0.296 Sum_probs=156.6
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh---------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM--------------------- 425 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l--------------------- 425 (602)
.++|...+.||+|+||.||+|+. .+|+.||||++.............+.+|+.++..+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46799999999999999999985 47899999998754333333445667788776444
Q ss_pred ----hcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCC-CCeEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 426 ----ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCS-PSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 426 ----~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~-~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
++|+|..++.. ...+++..+..++.|++.||+||| + ++|+||||||+|||++.++.+||+|||+++...
T Consensus 227 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 227 MEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp ECCCSSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EeeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 44444444432 234789999999999999999999 6 799999999999999999999999999998654
Q ss_pred CCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChh
Q 047576 501 ADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRK 580 (602)
Q Consensus 501 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 580 (602)
..........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+..
T Consensus 301 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~~~~~p~~-- 371 (446)
T 4ejn_A 301 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------EKLFELILMEEIRFPRT-- 371 (446)
T ss_dssp C-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCCCCCCTT--
T ss_pred CCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-------HHHHHHHHhCCCCCCcc--
Confidence 444444556899999999999999999999999999999999999999974321 22223333333332211
Q ss_pred hHHHHHHHHHHHhhccCcCCCC
Q 047576 581 VIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 581 ~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+||++||++
T Consensus 372 ---~~~~~~~li~~~L~~dP~~ 390 (446)
T 4ejn_A 372 ---LGPEAKSLLSGLLKKDPKQ 390 (446)
T ss_dssp ---SCHHHHHHHHHHTCSSTTT
T ss_pred ---CCHHHHHHHHHHcccCHHH
Confidence 1234789999999999975
No 52
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.97 E-value=2.3e-32 Score=287.69 Aligned_cols=219 Identities=22% Similarity=0.319 Sum_probs=162.4
Q ss_pred CccccCcccccccccccceeeec--------CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh-hcCc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL--------PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM-ERGS--------- 429 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~--------~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l-~~gs--------- 429 (602)
.++|...+.||+|+||.||+|+. .++..||||+++..... ...+.+.+|+.++..+ .|++
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBH--HHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCH--HHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 46788899999999999999974 24668999999765332 3456788899988555 4444
Q ss_pred ----------------cccccccccc-------------hhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCe
Q 047576 430 ----------------LFRILHNDAE-------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480 (602)
Q Consensus 430 ----------------L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NI 480 (602)
|.+++..... ...+++.++..++.||+.||+||| +++|+||||||+||
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NI 234 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV 234 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGE
T ss_pred cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhE
Confidence 4444432210 123788999999999999999999 78999999999999
Q ss_pred eeCCCCcceeecccccccccCCCC--CccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCccccc
Q 047576 481 LLNSKLEAFVADFGTARLLHADSS--NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSS 557 (602)
Q Consensus 481 Lld~~~~~kL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~ 557 (602)
|++.++.+||+|||+++....... ......+++.|+|||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 235 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~--- 311 (370)
T 2psq_A 235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--- 311 (370)
T ss_dssp EECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG---
T ss_pred EECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH---
Confidence 999999999999999986654322 1223457789999999999999999999999999999999 9999975321
Q ss_pred CCCcccchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 558 SYDPKIMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 558 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.. +...+......+.... ....+.+++..||+.||++
T Consensus 312 ----~~-~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dP~~ 348 (370)
T 2psq_A 312 ----EE-LFKLLKEGHRMDKPAN---CTNELYMMMRDCWHAVPSQ 348 (370)
T ss_dssp ----GG-HHHHHHTTCCCCCCTT---SCHHHHHHHHHHTCSSGGG
T ss_pred ----HH-HHHHHhcCCCCCCCCC---CCHHHHHHHHHHcCCChhh
Confidence 11 1122222211111111 2344889999999999974
No 53
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.97 E-value=5.3e-32 Score=277.91 Aligned_cols=181 Identities=23% Similarity=0.316 Sum_probs=148.3
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA--------- 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~--------- 438 (602)
.++|...+.||+|+||.||+|+..+|+.||+|++...... ....+.+.+|+.++..+.|+++..++....
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAED-EGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEeccccc-chhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 4689999999999999999999988999999998754332 223467788999999888888776654210
Q ss_pred -------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCC
Q 047576 439 -------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 505 (602)
Q Consensus 439 -------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~ 505 (602)
....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++........
T Consensus 99 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 175 (311)
T 3niz_A 99 EFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS 175 (311)
T ss_dssp ECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred cCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCccc
Confidence 1223789999999999999999999 789999999999999999999999999999877554444
Q ss_pred cccccccccccccccccc-CcCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 506 QTLLAGSYGYIAPELAYT-MVMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 506 ~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
.....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 223 (311)
T 3niz_A 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGV 223 (311)
T ss_dssp --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCC
Confidence 445678999999999876 45899999999999999999999999753
No 54
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.97 E-value=1.2e-32 Score=284.74 Aligned_cols=220 Identities=20% Similarity=0.298 Sum_probs=158.7
Q ss_pred CccccCcccccccccccceeeec----CCCcEEeeeccCCchhH-HHHHhhhhHhHHHHHHhhhcCcccccccccc----
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL----PNGRVFALKKLNSPETE-ELAFIRSFRNEAQVLSQMERGSLFRILHNDA---- 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~----~~g~~vavK~l~~~~~~-~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~---- 438 (602)
.++|...+.||+|+||.||+|+. .+|+.||+|+++..... .......+.+|+.+++.+.|+++..++....
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 56899999999999999999986 47899999999765422 1223456788999997777777666543210
Q ss_pred ------------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 439 ------------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 439 ------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
....+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 1234788899999999999999999 7899999999999999999999999999998654
Q ss_pred CCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChh
Q 047576 501 ADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRK 580 (602)
Q Consensus 501 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 580 (602)
..........||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+.......+..
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------~~~~~~i~~~~~~~p~~-- 243 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR-------KKTIDKILKCKLNLPPY-- 243 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHTCCCCCTT--
T ss_pred cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhCCCCCCCC--
Confidence 433334446799999999999998999999999999999999999999975321 22233344433332211
Q ss_pred hHHHHHHHHHHHhhccCcCCCC
Q 047576 581 VIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 581 ~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+|++.||++
T Consensus 244 ---~~~~~~~li~~~L~~dp~~ 262 (327)
T 3a62_A 244 ---LTQEARDLLKKLLKRNAAS 262 (327)
T ss_dssp ---SCHHHHHHHHHHSCSCGGG
T ss_pred ---CCHHHHHHHHHHHhcCHhh
Confidence 1234788999999999974
No 55
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.97 E-value=9.5e-33 Score=287.66 Aligned_cols=218 Identities=21% Similarity=0.288 Sum_probs=158.3
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|...+.||+|+||.||+|+. .+|+.||||++...... ...+.+.+|+.++..+.|+++..++...
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv 86 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG--SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMV 86 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEE
Confidence 46799999999999999999985 57999999998765432 1346688899998666666555443210
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCC-
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS- 503 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~- 503 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 87 ~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 87 LEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 01234889999999999999999999 7899999999999999999999999999987654332
Q ss_pred CCccccccccccccccccccCcC-CccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhH
Q 047576 504 SNQTLLAGSYGYIAPELAYTMVM-TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVI 582 (602)
Q Consensus 504 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 582 (602)
.......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||+.... ......+.......+..
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~~~~~p~~---- 232 (347)
T 3zgw_A 164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV-------MALYKKIMRGKYDVPKW---- 232 (347)
T ss_dssp --------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCCCCCTT----
T ss_pred ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHcCCCCCCCC----
Confidence 22334579999999999988775 8899999999999999999999975321 22223344433332211
Q ss_pred HHHHHHHHHHhhccCcCCCC
Q 047576 583 QDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 583 ~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+|++.||++
T Consensus 233 -~s~~~~~li~~~L~~dP~~ 251 (347)
T 3zgw_A 233 -LSPSSILLLQQMLQVDPKK 251 (347)
T ss_dssp -CCHHHHHHHHHHTCSSGGG
T ss_pred -CCHHHHHHHHHHcccCHhH
Confidence 1123678999999999974
No 56
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.97 E-value=2.1e-32 Score=282.25 Aligned_cols=227 Identities=23% Similarity=0.335 Sum_probs=161.9
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA--------- 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~--------- 438 (602)
.++|...+.||+|+||.||+|+.. ++.||||++...... ...+..|+.++..+.|+++..++....
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 97 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQ----SWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHH----HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchH----HHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence 467999999999999999999874 799999998654432 233445777665555555444332100
Q ss_pred ----------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCC----------CeEEeCCCCCCeeeCCCCcceeec
Q 047576 439 ----------------EAVELDWAKRVNIVKAMAHALAYLHHDCSP----------SVVHRDISSNNILLNSKLEAFVAD 492 (602)
Q Consensus 439 ----------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~----------~ivH~DLkp~NILld~~~~~kL~D 492 (602)
....+++.++..++.|++.||+||| +. +|+||||||+||+++.++.+||+|
T Consensus 98 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred EEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 1233789999999999999999999 77 999999999999999999999999
Q ss_pred ccccccccCCCCC--cccccccccccccccccc-----CcCCccchhHHHHHHHHHHHcCCCCCCCCcccccC-------
Q 047576 493 FGTARLLHADSSN--QTLLAGSYGYIAPELAYT-----MVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSS------- 558 (602)
Q Consensus 493 FG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~------- 558 (602)
||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||.........
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 9999876543222 233578999999999886 35677899999999999999999999753321110
Q ss_pred -CCcccchhh-hhccCCCCCCCh--hhHHHHHHHHHHHhhccCcCCCC
Q 047576 559 -YDPKIMLID-VLDQRLPPPVDR--KVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 559 -~~~~~~~~~-~~d~~l~~~~~~--~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
......+.+ +......+.... ........+.+++.+||+.||++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 302 (322)
T 3soc_A 255 QHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEA 302 (322)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGG
T ss_pred cCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhh
Confidence 001111111 222222222111 11235566999999999999974
No 57
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.97 E-value=3.2e-32 Score=281.11 Aligned_cols=221 Identities=22% Similarity=0.304 Sum_probs=162.6
Q ss_pred CCCCccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcc-------------
Q 047576 365 MPTPRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSL------------- 430 (602)
Q Consensus 365 lp~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL------------- 430 (602)
.+..++|...+.||+|+||.||+|+.. +++.||||++...... ...+.+.+|+.++..+.|+++
T Consensus 3 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 80 (323)
T 3tki_A 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 80 (323)
T ss_dssp CTTTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred CcHhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc--chHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeE
Confidence 345678999999999999999999865 7899999998654332 234677889988855555444
Q ss_pred ------------ccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccc
Q 047576 431 ------------FRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARL 498 (602)
Q Consensus 431 ------------~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~ 498 (602)
.+++.. ...+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 154 (323)
T 3tki_A 81 YLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATV 154 (323)
T ss_dssp EEEEECCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEcCCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccce
Confidence 444432 234899999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCC--CCccccccccccccccccccCcC-CccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCC
Q 047576 499 LHADS--SNQTLLAGSYGYIAPELAYTMVM-TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPP 575 (602)
Q Consensus 499 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~ 575 (602)
..... .......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||+..... ..............
T Consensus 155 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~~~~~~~~~~ 228 (323)
T 3tki_A 155 FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS------CQEYSDWKEKKTYL 228 (323)
T ss_dssp CEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT------SHHHHHHHTTCTTS
T ss_pred eccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH------HHHHHHHhcccccC
Confidence 64322 22234579999999999987775 77899999999999999999999753221 11112222222211
Q ss_pred CCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 576 PVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 576 ~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
+.... ....+.+++.+|++.||++
T Consensus 229 ~~~~~---~~~~~~~li~~~L~~dP~~ 252 (323)
T 3tki_A 229 NPWKK---IDSAPLALLHKILVENPSA 252 (323)
T ss_dssp TTGGG---SCHHHHHHHHHHSCSSTTT
T ss_pred Ccccc---CCHHHHHHHHHHccCChhh
Confidence 11111 2234778999999999975
No 58
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.97 E-value=3.5e-32 Score=280.62 Aligned_cols=218 Identities=24% Similarity=0.349 Sum_probs=163.5
Q ss_pred cccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc-----------
Q 047576 370 KIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND----------- 437 (602)
Q Consensus 370 ~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~----------- 437 (602)
.|+....||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.++..+.|+++..++...
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 122 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ---RRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLME 122 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC---SHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh---HHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 3666778999999999999875 7999999998654322 235677899988666555554433210
Q ss_pred ----------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCCcc
Q 047576 438 ----------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQT 507 (602)
Q Consensus 438 ----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~~~ 507 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++...........
T Consensus 123 ~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 199 (321)
T 2c30_A 123 FLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK 199 (321)
T ss_dssp CCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred cCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccc
Confidence 01224889999999999999999999 78999999999999999999999999999987765444444
Q ss_pred ccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHHHHHH
Q 047576 508 LLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQDILL 587 (602)
Q Consensus 508 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 587 (602)
...||+.|+|||++.+..++.++||||||+++|||++|+.||...... .....+.+...+.... .......
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~--~~~~~~~ 270 (321)
T 2c30_A 200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV-------QAMKRLRDSPPPKLKN--SHKVSPV 270 (321)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHSSCCCCTT--GGGSCHH
T ss_pred cccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHhcCCCCCcCc--cccCCHH
Confidence 567999999999999999999999999999999999999999753221 1112222221111000 0112234
Q ss_pred HHHHHhhccCcCCCC
Q 047576 588 VSTISFACLQSNPKS 602 (602)
Q Consensus 588 l~~l~~~Cl~~dP~e 602 (602)
+.+++.+||+.||++
T Consensus 271 l~~li~~~l~~dp~~ 285 (321)
T 2c30_A 271 LRDFLERMLVRDPQE 285 (321)
T ss_dssp HHHHHHHHSCSSTTT
T ss_pred HHHHHHHHccCChhh
Confidence 788999999999975
No 59
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.97 E-value=1e-32 Score=285.59 Aligned_cols=220 Identities=14% Similarity=0.147 Sum_probs=162.7
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh-hcCccccc------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM-ERGSLFRI------------ 433 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l-~~gsL~~~------------ 433 (602)
.++|...+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|+.++..+ .|+++..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 82 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAM 82 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEE
Confidence 46799999999999999999985 5789999999865432 24677888888666 55544433
Q ss_pred ------------cccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCc-----ceeeccccc
Q 047576 434 ------------LHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLE-----AFVADFGTA 496 (602)
Q Consensus 434 ------------l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~-----~kL~DFG~a 496 (602)
+... ...+++.++..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||++
T Consensus 83 v~e~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a 157 (330)
T 2izr_A 83 VLELLGPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157 (330)
T ss_dssp EEECCCCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred EEEeCCCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence 3221 245899999999999999999999 789999999999999999887 999999999
Q ss_pred ccccCCCCC-------ccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhh
Q 047576 497 RLLHADSSN-------QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVL 569 (602)
Q Consensus 497 ~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~ 569 (602)
+........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+..+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~----~~~~~~~~~i~ 233 (330)
T 2izr_A 158 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA----DTLKERYQKIG 233 (330)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC----SSHHHHHHHHH
T ss_pred eeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccc----ccHHHHHHHHH
Confidence 876443221 2346799999999999999999999999999999999999999975321 11111122222
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 570 DQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 570 d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
+...+.+......... .+.+++..||+.||++
T Consensus 234 ~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~ 265 (330)
T 2izr_A 234 DTKRATPIEVLCENFP-EMATYLRYVRRLDFFE 265 (330)
T ss_dssp HHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTC
T ss_pred hhhccCCHHHHhccCh-HHHHHHHHHHhCCCCC
Confidence 2222111110000012 6889999999999975
No 60
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.97 E-value=7.7e-33 Score=294.51 Aligned_cols=221 Identities=21% Similarity=0.264 Sum_probs=162.5
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc--------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA-------- 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~-------- 438 (602)
.++|...+.||+|+||.||+|+.. +++.||+|++.+.........+.+.+|+.++..+.|+++..++....
T Consensus 68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 147 (410)
T 3v8s_A 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV 147 (410)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 578999999999999999999875 68899999987544333333456778888885555554444322100
Q ss_pred -------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC-
Q 047576 439 -------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS- 504 (602)
Q Consensus 439 -------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~- 504 (602)
....+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus 148 ~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~ 224 (410)
T 3v8s_A 148 MEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 224 (410)
T ss_dssp ECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEE
T ss_pred EeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcc
Confidence 1224788999999999999999999 78999999999999999999999999999987654322
Q ss_pred CccccccccccccccccccCc----CCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccC--CCCCCC
Q 047576 505 NQTLLAGSYGYIAPELAYTMV----MTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQR--LPPPVD 578 (602)
Q Consensus 505 ~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~--l~~~~~ 578 (602)
......||+.|+|||++.+.. ++.++|||||||++|||+||+.||..... ......++... +..+..
T Consensus 225 ~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-------~~~~~~i~~~~~~~~~p~~ 297 (410)
T 3v8s_A 225 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-------VGTYSKIMNHKNSLTFPDD 297 (410)
T ss_dssp ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHTHHHHCCCCTT
T ss_pred cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh-------hhHHHHHHhccccccCCCc
Confidence 123467999999999987655 78999999999999999999999974321 22223333221 111111
Q ss_pred hhhHHHHHHHHHHHhhccCcCCC
Q 047576 579 RKVIQDILLVSTISFACLQSNPK 601 (602)
Q Consensus 579 ~~~~~~~~~l~~l~~~Cl~~dP~ 601 (602)
.. ....+.+++.+|++.+|+
T Consensus 298 ~~---~s~~~~~li~~lL~~~~~ 317 (410)
T 3v8s_A 298 ND---ISKEAKNLICAFLTDREV 317 (410)
T ss_dssp CC---CCHHHHHHHHHHSSCGGG
T ss_pred cc---ccHHHHHHHHHHccChhh
Confidence 11 123377889999997764
No 61
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.97 E-value=3e-32 Score=286.17 Aligned_cols=175 Identities=17% Similarity=0.226 Sum_probs=143.3
Q ss_pred CccccCcccccccccccceeee------cCCCcEEeeeccCCchhHHHHHhhhhHhHHHHH-------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQ------LPNGRVFALKKLNSPETEELAFIRSFRNEAQVL------------------- 422 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~------~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il------------------- 422 (602)
.++|...+.||+|+||.||+|. ..+++.||||++...... .+..|++++
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPW------EFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHH------HHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChh------HHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 4678899999999999999994 446889999999765432 233344333
Q ss_pred ---------HhhhcCcccccccccc--chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCC-------
Q 047576 423 ---------SQMERGSLFRILHNDA--EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS------- 484 (602)
Q Consensus 423 ---------~~l~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~------- 484 (602)
||+++|+|.+++.... ....+++.++..|+.||+.||+||| +.+|+||||||+|||++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC--
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccc
Confidence 6777888888876422 2345999999999999999999999 889999999999999998
Q ss_pred ----CCcceeecccccccccCC--CCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCC
Q 047576 485 ----KLEAFVADFGTARLLHAD--SSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDL 551 (602)
Q Consensus 485 ----~~~~kL~DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~ 551 (602)
++.+||+|||+++.+... ........||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 287 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK 287 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcccc
Confidence 899999999999765422 2223345799999999999999999999999999999999999999953
No 62
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.97 E-value=1.3e-32 Score=279.52 Aligned_cols=222 Identities=17% Similarity=0.253 Sum_probs=160.3
Q ss_pred CCccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhc------------------
Q 047576 367 TPRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER------------------ 427 (602)
Q Consensus 367 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~------------------ 427 (602)
..++|...+.||+|+||.||+|+. .+++.||||++..... .+.+.+|+.++..+.+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 357899999999999999999985 5789999998654332 2456777777754443
Q ss_pred -------CccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeee---CCCCcceeecccccc
Q 047576 428 -------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILL---NSKLEAFVADFGTAR 497 (602)
Q Consensus 428 -------gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILl---d~~~~~kL~DFG~a~ 497 (602)
++|.+++.. ....+++.++..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++
T Consensus 82 lv~e~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~ 156 (296)
T 4hgt_A 82 MVMELLGPSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EEEECCCCBHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEEEccCCCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccce
Confidence 444444432 1234899999999999999999999 7899999999999999 788999999999998
Q ss_pred cccCCCC-------CccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhc
Q 047576 498 LLHADSS-------NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLD 570 (602)
Q Consensus 498 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d 570 (602)
....... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .....+..+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~ 232 (296)
T 4hgt_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA----TKRQKYERISE 232 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS----SSSSHHHHHHH
T ss_pred eccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchh----hhhhhhhhhhc
Confidence 7654322 123457899999999999999999999999999999999999999753321 11112222222
Q ss_pred cCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 571 QRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 571 ~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.....+...........+.+++..||+.||++
T Consensus 233 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~ 264 (296)
T 4hgt_A 233 KKMSTPIEVLCKGYPSEFATYLNFCRSLRFDD 264 (296)
T ss_dssp HHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTC
T ss_pred ccccchhhhhhccCCHHHHHHHHHHHhcCCCC
Confidence 22222210000011245889999999999975
No 63
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.97 E-value=1.3e-32 Score=279.84 Aligned_cols=221 Identities=17% Similarity=0.187 Sum_probs=162.0
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh-h-------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM-E------------------- 426 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l-~------------------- 426 (602)
.++|...+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|+.++..+ .
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 83 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 83 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc-----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence 35799999999999999999985 5799999998864432 24566777776444 2
Q ss_pred -----cCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCc-----ceeeccccc
Q 047576 427 -----RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLE-----AFVADFGTA 496 (602)
Q Consensus 427 -----~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~-----~kL~DFG~a 496 (602)
+++|.+++... ...+++.++..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||++
T Consensus 84 v~e~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~ 158 (298)
T 1csn_A 84 VIDLLGPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158 (298)
T ss_dssp EEECCCCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred EEEecCCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence 44455544431 234899999999999999999999 889999999999999987776 999999999
Q ss_pred ccccCCCC-------CccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhh
Q 047576 497 RLLHADSS-------NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVL 569 (602)
Q Consensus 497 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~ 569 (602)
+....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... .....+..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~----~~~~~~~~~~ 234 (298)
T 1csn_A 159 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA----TNKQKYERIG 234 (298)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC----CHHHHHHHHH
T ss_pred cccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcc----ccHHHHHHHH
Confidence 87754322 123457999999999999999999999999999999999999999753211 1111122222
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 570 DQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 570 d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
......+...........+.+++..||+.||++
T Consensus 235 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~ 267 (298)
T 1csn_A 235 EKKQSTPLRELCAGFPEEFYKYMHYARNLAFDA 267 (298)
T ss_dssp HHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTC
T ss_pred hhccCccHHHHHhhCcHHHHHHHHHHhcCCccc
Confidence 211111110000012345889999999999975
No 64
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.97 E-value=1.7e-32 Score=283.38 Aligned_cols=218 Identities=20% Similarity=0.257 Sum_probs=139.4
Q ss_pred ccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhh-cCccccccccc---------------
Q 047576 375 YCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME-RGSLFRILHND--------------- 437 (602)
Q Consensus 375 ~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~-~gsL~~~l~~~--------------- 437 (602)
+.||+|+||.||+|+.. +++.||||++.... ...+.+|+.++..+. |+++..++...
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRM------EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGGG------HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChhh------hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 67999999999999864 68999999986432 234566777775554 44444432210
Q ss_pred -------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCC---cceeecccccccccCCCCCcc
Q 047576 438 -------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKL---EAFVADFGTARLLHADSSNQT 507 (602)
Q Consensus 438 -------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~---~~kL~DFG~a~~~~~~~~~~~ 507 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+++..........
T Consensus 91 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 167 (325)
T 3kn6_A 91 GELFERIKKKKHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK 167 (325)
T ss_dssp CBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCccc
Confidence 01234889999999999999999999 78999999999999997665 899999999987655444444
Q ss_pred ccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHHHHHH
Q 047576 508 LLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQDILL 587 (602)
Q Consensus 508 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 587 (602)
...||+.|+|||++.+..++.++||||+||++|+|++|+.||...............+..+.......+. .........
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~s~~ 246 (325)
T 3kn6_A 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEG-EAWKNVSQE 246 (325)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCS-HHHHTSCHH
T ss_pred ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCc-ccccCCCHH
Confidence 5678999999999999999999999999999999999999997543221111222222333333332221 111223455
Q ss_pred HHHHHhhccCcCCCC
Q 047576 588 VSTISFACLQSNPKS 602 (602)
Q Consensus 588 l~~l~~~Cl~~dP~e 602 (602)
+.+++..|++.||++
T Consensus 247 ~~~li~~~L~~dP~~ 261 (325)
T 3kn6_A 247 AKDLIQGLLTVDPNK 261 (325)
T ss_dssp HHHHHHHHHCCCTTT
T ss_pred HHHHHHHHCCCChhH
Confidence 889999999999975
No 65
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.97 E-value=4.9e-33 Score=285.49 Aligned_cols=224 Identities=22% Similarity=0.350 Sum_probs=161.4
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|...+.||+|+||.||+|+. .+++.||||++.............+.+|+.++..+.|+++..++...
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46799999999999999999985 57899999999876544445567788899888666666655543210
Q ss_pred -----------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 438 -----------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 438 -----------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred cEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 01234789999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCC---CccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCC
Q 047576 501 ADSS---NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPV 577 (602)
Q Consensus 501 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 577 (602)
.... ......||+.|+|||++.+..++.++||||||+++|||+||+.||...... ......+.....++.
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-------~~~~~~~~~~~~~~~ 240 (311)
T 3ork_A 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV-------SVAYQHVREDPIPPS 240 (311)
T ss_dssp --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-------HHHHHHHHCCCCCHH
T ss_pred ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhcCCCCCcc
Confidence 4322 122356899999999999999999999999999999999999999753221 111222222211110
Q ss_pred ChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 578 DRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 578 ~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.........+.+++.+||+.||++
T Consensus 241 -~~~~~~~~~l~~li~~~l~~dP~~ 264 (311)
T 3ork_A 241 -ARHEGLSADLDAVVLKALAKNPEN 264 (311)
T ss_dssp -HHSTTCCHHHHHHHHHHTCSSGGG
T ss_pred -cccCCCCHHHHHHHHHHHhcCHhh
Confidence 000112234788999999999974
No 66
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.97 E-value=4.8e-32 Score=281.12 Aligned_cols=217 Identities=20% Similarity=0.285 Sum_probs=166.7
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
..+|...+.||+|+||.||+|+. .+++.||+|++...........+.+.+|+.++..+.|+++..++...
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35789999999999999999986 57899999998755443333445788999999888887776654321
Q ss_pred ------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCC
Q 047576 438 ------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 505 (602)
Q Consensus 438 ------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~ 505 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 88 ~E~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~- 163 (336)
T 3h4j_B 88 IEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF- 163 (336)
T ss_dssp ECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT-
T ss_pred EECCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcc-
Confidence 01234789999999999999999999 77999999999999999999999999999987654332
Q ss_pred ccccccccccccccccccCcC-CccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhcc--CCCCCCChhhH
Q 047576 506 QTLLAGSYGYIAPELAYTMVM-TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ--RLPPPVDRKVI 582 (602)
Q Consensus 506 ~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~--~l~~~~~~~~~ 582 (602)
.....||+.|+|||++.+..+ +.++||||+||++|+|++|+.||+....... ...+... .++...+
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-------~~~i~~~~~~~p~~~s---- 232 (336)
T 3h4j_B 164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-------FKKVNSCVYVMPDFLS---- 232 (336)
T ss_dssp TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-------BCCCCSSCCCCCTTSC----
T ss_pred cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-------HHHHHcCCCCCcccCC----
Confidence 234579999999999988776 6899999999999999999999975321100 0111111 1122222
Q ss_pred HHHHHHHHHHhhccCcCCCC
Q 047576 583 QDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 583 ~~~~~l~~l~~~Cl~~dP~e 602 (602)
..+.+++.+|++.||++
T Consensus 233 ---~~~~~li~~~L~~dP~~ 249 (336)
T 3h4j_B 233 ---PGAQSLIRRMIVADPMQ 249 (336)
T ss_dssp ---HHHHHHHHTTSCSSGGG
T ss_pred ---HHHHHHHHHHcCCChhH
Confidence 23778999999999974
No 67
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.97 E-value=2.7e-32 Score=287.20 Aligned_cols=226 Identities=12% Similarity=0.044 Sum_probs=156.6
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhh--cCcccccccc--------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME--RGSLFRILHN-------- 436 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~--~gsL~~~l~~-------- 436 (602)
..+|...+.||+|+||.||+|+.. +|+.||||++...........+.+.+|+.+++.+. |+++..++..
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 456889999999999999999854 78999999998765544445667788866665554 6664331100
Q ss_pred ----------------------------c--c--------chhhhcHHHH------HHHHHHHHHHHHHhhhcCCCCeEE
Q 047576 437 ----------------------------D--A--------EAVELDWAKR------VNIVKAMAHALAYLHHDCSPSVVH 472 (602)
Q Consensus 437 ----------------------------~--~--------~~~~l~~~~~------~~i~~~ia~~L~~LH~~~~~~ivH 472 (602)
. + ....+++..+ ..++.||+.||+||| +++|+|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ivH 217 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVH 217 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCcc
Confidence 0 0 0112344445 677899999999999 789999
Q ss_pred eCCCCCCeeeCCCCcceeecccccccccCCCCCcccccccccccccccccc--CcCCccchhHHHHHHHHHHHcCCCCCC
Q 047576 473 RDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYT--MVMTEKYDVYSFGVVTLEVLMGKHPRD 550 (602)
Q Consensus 473 ~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltG~~Pf~ 550 (602)
|||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||.
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~ 294 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTR---GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG 294 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCE---EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCC---ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999999865421 213467799999999987 679999999999999999999999998
Q ss_pred CCcccccCCCcccchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 551 LHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.........................+.... ....+.+++.+||+.||++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~L~~dP~~ 343 (371)
T 3q60_A 295 LVTPGIKGSWKRPSLRVPGTDSLAFGSCTP---LPDFVKTLIGRFLNFDRRR 343 (371)
T ss_dssp BCCTTCTTCCCBCCTTSCCCCSCCCTTSSC---CCHHHHHHHHHHTCSSTTT
T ss_pred CcCcccccchhhhhhhhccccccchhhccC---CCHHHHHHHHHHcCCChhh
Confidence 643221111111111111112222111111 2334889999999999975
No 68
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.97 E-value=3.6e-32 Score=278.65 Aligned_cols=222 Identities=23% Similarity=0.386 Sum_probs=157.0
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc----------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND---------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~---------- 437 (602)
.++|.....||+|+||.||+|+... .+|+|+++..... ....+.+.+|+.++..+.|+++..++...
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPT-PEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCcEEEEEe
Confidence 4578889999999999999998743 5788877643322 22456788999998666555554433210
Q ss_pred ------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCC--C
Q 047576 438 ------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD--S 503 (602)
Q Consensus 438 ------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~--~ 503 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++...... .
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 01234889999999999999999999 789999999999999999999999999999765421 1
Q ss_pred CCccccccccccccccccc---cCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCC-CCCCCh
Q 047576 504 SNQTLLAGSYGYIAPELAY---TMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRL-PPPVDR 579 (602)
Q Consensus 504 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l-~~~~~~ 579 (602)
.......||+.|+|||++. +..++.++||||||+++|||+||+.||...... ......+.... .+....
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~-------~~~~~~~~~~~~~~~~~~ 261 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-------DQIIFMVGRGYASPDLSK 261 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-------HHHHHHHHHTCCCCCSTT
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcH-------HHHHHHHhcCCCCcchhh
Confidence 2233457999999999886 566889999999999999999999999753221 11111111111 111100
Q ss_pred hhHHHHHHHHHHHhhccCcCCCC
Q 047576 580 KVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 580 ~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
........+.+++..||+.||++
T Consensus 262 ~~~~~~~~l~~li~~~l~~~p~~ 284 (307)
T 3lb7_A 262 LYKNCPKAMKRLVADCVKKVKEE 284 (307)
T ss_dssp SCSSSCHHHHHHHHHHSCSSSTT
T ss_pred hhcCCcHHHHHHHHHHhhCChhh
Confidence 00113345889999999999985
No 69
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.97 E-value=1.6e-32 Score=278.85 Aligned_cols=221 Identities=17% Similarity=0.254 Sum_probs=163.4
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhc-------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER------------------- 427 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~------------------- 427 (602)
.++|...+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|+.++..+.+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 57899999999999999999985 5799999998765432 2456678777755444
Q ss_pred ------CccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeee---CCCCcceeeccccccc
Q 047576 428 ------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILL---NSKLEAFVADFGTARL 498 (602)
Q Consensus 428 ------gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILl---d~~~~~kL~DFG~a~~ 498 (602)
++|.+++.. ....+++.++..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++..
T Consensus 83 v~e~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 157 (296)
T 3uzp_A 83 VMELLGPSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp EEECCCCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEEecCCCHHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence 444444432 1235899999999999999999999 7899999999999999 4888999999999987
Q ss_pred ccCCCC-------CccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhcc
Q 047576 499 LHADSS-------NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ 571 (602)
Q Consensus 499 ~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~ 571 (602)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+..+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~ 233 (296)
T 3uzp_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA----TKRQKYERISEK 233 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS----SSSSHHHHHHHH
T ss_pred ccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCch----hhhhhhhhhccc
Confidence 654332 123457999999999999999999999999999999999999999753221 111122222222
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 572 RLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 572 ~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+...........+.+++..||+.||++
T Consensus 234 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~ 264 (296)
T 3uzp_A 234 KMSTPIEVLCKGYPSEFATYLNFCRSLRFDD 264 (296)
T ss_dssp HHHSCHHHHTTTSCHHHHHHHHHHHTSCTTC
T ss_pred ccCCchHHHHhhCCHHHHHHHHHHHhcCcCc
Confidence 2221110000012234889999999999975
No 70
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.97 E-value=4.4e-32 Score=282.45 Aligned_cols=221 Identities=22% Similarity=0.337 Sum_probs=163.1
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhc--Cccccccccc--------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER--GSLFRILHND-------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~--gsL~~~l~~~-------- 437 (602)
.++|...+.||+|+||.||+|...+++.||||++...... ....+.+.+|+.++..+.+ +++..++...
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccc-hHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 4679999999999999999999988999999998654332 2345678899999988765 5555443321
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS 504 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~ 504 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+|||++ ++.+||+|||+++.......
T Consensus 87 v~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~ 162 (343)
T 3dbq_A 87 VMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 162 (343)
T ss_dssp EECCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----
T ss_pred EEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCcccc
Confidence 01234788999999999999999999 78999999999999997 57899999999987654322
Q ss_pred --Ccccccccccccccccccc-----------CcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhcc
Q 047576 505 --NQTLLAGSYGYIAPELAYT-----------MVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ 571 (602)
Q Consensus 505 --~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~ 571 (602)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .....+..++++
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~~~~~~ 236 (343)
T 3dbq_A 163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII------NQISKLHAIIDP 236 (343)
T ss_dssp -------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC------SHHHHHHHHHCT
T ss_pred cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh------hHHHHHHHHhcC
Confidence 1234579999999999865 668899999999999999999999997421 122234455554
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 572 RLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 572 ~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
......... ....+.+++..||+.||++
T Consensus 237 ~~~~~~~~~---~~~~l~~li~~~L~~dp~~ 264 (343)
T 3dbq_A 237 NHEIEFPDI---PEKDLQDVLKCCLKRDPKQ 264 (343)
T ss_dssp TSCCCCCCC---SCHHHHHHHHHHTCSSTTT
T ss_pred CcccCCccc---CCHHHHHHHHHHcCCChhH
Confidence 443222221 1234789999999999975
No 71
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.97 E-value=5.2e-32 Score=291.22 Aligned_cols=223 Identities=18% Similarity=0.223 Sum_probs=168.1
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc--------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA-------- 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~-------- 438 (602)
.++|...+.||+|+||.||+|.. .+|+.||+|++....... ...+.+.+|+.++..+.|+++..++....
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSA-RDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHH-HHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCH-HHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 46789999999999999999975 478999999987654332 23567889999997777777665543210
Q ss_pred --------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeC---CCCcceeecccccccccC
Q 047576 439 --------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLN---SKLEAFVADFGTARLLHA 501 (602)
Q Consensus 439 --------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld---~~~~~kL~DFG~a~~~~~ 501 (602)
....+++.++..++.||+.||+||| +.+|+||||||+||+++ .++.+||+|||++.....
T Consensus 89 ~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 89 FDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp ECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 1234789999999999999999999 78999999999999998 457899999999987765
Q ss_pred CCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhh
Q 047576 502 DSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
.........||+.|+|||++.+..++.++||||+||++|+|++|+.||.... .......+.......+... .
T Consensus 166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~-------~~~~~~~i~~~~~~~~~~~-~ 237 (444)
T 3soa_A 166 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED-------QHRLYQQIKAGAYDFPSPE-W 237 (444)
T ss_dssp TCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS-------HHHHHHHHHHTCCCCCTTT-T
T ss_pred CCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc-------HHHHHHHHHhCCCCCCccc-c
Confidence 4444445679999999999999999999999999999999999999997432 1222233333332211110 0
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
......+.+++.+|++.||++
T Consensus 238 ~~~s~~~~~li~~~L~~dP~~ 258 (444)
T 3soa_A 238 DTVTPEAKDLINKMLTINPSK 258 (444)
T ss_dssp TTSCHHHHHHHHHHSCSSTTT
T ss_pred ccCCHHHHHHHHHHcCCChhH
Confidence 112334789999999999985
No 72
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.97 E-value=1.9e-31 Score=288.78 Aligned_cols=181 Identities=25% Similarity=0.293 Sum_probs=146.5
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccccc-------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDAE------- 439 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~~------- 439 (602)
.++|...+.||+|+||.||+|+. .+|+.||||++...... ....+.+.+|+.++..+.|+++..++.....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGS-HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccC-hHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 46799999999999999999975 46899999999765322 2345678899999999999888776542100
Q ss_pred ------------------hhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 440 ------------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 440 ------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
...+++.++..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 140 ~~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 140 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216 (464)
T ss_dssp CEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred CeEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence 123788999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCc
Q 047576 502 DSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHS 553 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~ 553 (602)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 217 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~ 267 (464)
T 3ttj_A 217 SF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 267 (464)
T ss_dssp CC-CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred Cc-ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 32 2344679999999999999999999999999999999999999997643
No 73
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.97 E-value=6.2e-32 Score=278.18 Aligned_cols=225 Identities=19% Similarity=0.286 Sum_probs=164.6
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccc--------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFR-------------- 432 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~-------------- 432 (602)
.++|...+.||+|+||.||+|+.. +++.||||++...... ...+.+.+|++++..+.|+++..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG--SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence 467999999999999999999875 5899999998754332 12355678888885555554444
Q ss_pred -------------ccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeee----CCCCcceeecccc
Q 047576 433 -------------ILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILL----NSKLEAFVADFGT 495 (602)
Q Consensus 433 -------------~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILl----d~~~~~kL~DFG~ 495 (602)
++........+++.++..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 3333222223899999999999999999999 7899999999999999 8888999999999
Q ss_pred cccccCCCCCccccccccccccccccc--------cCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhh
Q 047576 496 ARLLHADSSNQTLLAGSYGYIAPELAY--------TMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLID 567 (602)
Q Consensus 496 a~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~ 567 (602)
++....... .....||+.|+|||++. +..++.++|||||||++|||+||+.||........ ....+..
T Consensus 163 a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~~~~~ 238 (319)
T 4euu_A 163 ARELEDDEQ-FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR---NKEVMYK 238 (319)
T ss_dssp CEECCTTCC-BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGG---CHHHHHH
T ss_pred ceecCCCCc-eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccch---hHHHHHH
Confidence 987754432 23356999999999886 46789999999999999999999999964321110 0111111
Q ss_pred hhcc---------------------CCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 568 VLDQ---------------------RLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 568 ~~d~---------------------~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
++.. .++... .........+.+++.+|++.||++
T Consensus 239 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~ll~~~L~~dP~~ 293 (319)
T 4euu_A 239 IITGKPSGAISGVQKAENGPIDWSGDMPVSC-SLSRGLQVLLTPVLANILEADQEK 293 (319)
T ss_dssp HHHHCCTTCCEEEECSTTCCEEEESSCCTTC-SSCHHHHHHHHHHHHHHSCCCTTT
T ss_pred HhcCCCcccchhhhcccCCccccCccCCccc-ccchhHHHHhHHHHHHhccCChhh
Confidence 1111 112111 111335556889999999999985
No 74
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.97 E-value=1.2e-31 Score=276.08 Aligned_cols=180 Identities=21% Similarity=0.306 Sum_probs=134.3
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc--------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA-------- 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~-------- 438 (602)
.++|...+.||+|+||.||+|+.. +|+.||+|+++..... ...+.+.+|+.++..+.|+++..++....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE--GTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTT--CSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccccc--ccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence 467999999999999999999864 6899999998654321 12356778999998888877766543210
Q ss_pred -------------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccc
Q 047576 439 -------------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLL 499 (602)
Q Consensus 439 -------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~ 499 (602)
....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 82 ~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 82 FEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp EECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 0123788899999999999999999 789999999999999999999999999999876
Q ss_pred cCCCCCccccccccccccccccccC-cCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 500 HADSSNQTLLAGSYGYIAPELAYTM-VMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 500 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
...........||+.|+|||++.+. .++.++||||+||++|||+||+.||...
T Consensus 159 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 212 (317)
T 2pmi_A 159 GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT 212 (317)
T ss_dssp TSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 5443334445789999999998764 5899999999999999999999999754
No 75
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.97 E-value=2.4e-32 Score=282.45 Aligned_cols=219 Identities=23% Similarity=0.351 Sum_probs=159.7
Q ss_pred CccccCcccccccccccceeeecC-CCcE----EeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc-----
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRV----FALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND----- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~----vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~----- 437 (602)
.++|...+.||+|+||.||+|+.. +++. ||+|.+..... ....+.+.+|+.++..+.|+++..++...
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 91 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTSTV 91 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccC--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCe
Confidence 567999999999999999999853 4443 58888754332 23456788999999777776666544311
Q ss_pred -----------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 438 -----------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 438 -----------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
.....+++..+..|+.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 92 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 168 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence 01234789999999999999999999 7899999999999999999999999999998775
Q ss_pred CCCCC--ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCC
Q 047576 501 ADSSN--QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPV 577 (602)
Q Consensus 501 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 577 (602)
..... .....+|+.|+|||++.+..++.++|||||||++|||+| |+.||+.... ..+...+......+.
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------~~~~~~~~~~~~~~~ 240 (327)
T 3poz_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--------SEISSILEKGERLPQ 240 (327)
T ss_dssp TTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--------GGHHHHHHTTCCCCC
T ss_pred CCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH--------HHHHHHHHcCCCCCC
Confidence 43322 223456789999999999999999999999999999999 9999975321 122333333322222
Q ss_pred ChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 578 DRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 578 ~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
... ....+.+++.+||+.||++
T Consensus 241 ~~~---~~~~~~~li~~~l~~~p~~ 262 (327)
T 3poz_A 241 PPI---CTIDVYMIMVKCWMIDADS 262 (327)
T ss_dssp CTT---BCHHHHHHHHHHTCSCGGG
T ss_pred Ccc---CCHHHHHHHHHHcCCChhh
Confidence 222 3345889999999999974
No 76
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=3.5e-32 Score=280.64 Aligned_cols=219 Identities=21% Similarity=0.276 Sum_probs=166.5
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|...+.||+|+||.||+|+.. +++.||+|.+...... ...+.+|+.++..+.|+++..++...
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~----~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD----QVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHH----HHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCccc----HHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 467889999999999999999864 6889999998755432 34577899988666655554433210
Q ss_pred --------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCC--CCcceeecccccccccC
Q 047576 438 --------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS--KLEAFVADFGTARLLHA 501 (602)
Q Consensus 438 --------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~--~~~~kL~DFG~a~~~~~ 501 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||++.....
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 80 FEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp ECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred EEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 01234889999999999999999999 789999999999999987 78999999999987654
Q ss_pred CCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhh
Q 047576 502 DSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
.. ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ....+..+.+.....+. ...
T Consensus 157 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~~~~i~~~~~~~~~-~~~ 227 (321)
T 1tki_A 157 GD-NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET-------NQQIIENIMNAEYTFDE-EAF 227 (321)
T ss_dssp TC-EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS-------HHHHHHHHHHTCCCCCH-HHH
T ss_pred CC-ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC-------HHHHHHHHHcCCCCCCh-hhh
Confidence 32 2344679999999999999889999999999999999999999997432 12233444444433221 111
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
......+.+++.+|++.||++
T Consensus 228 ~~~s~~~~~li~~~L~~dp~~ 248 (321)
T 1tki_A 228 KEISIEAMDFVDRLLVKERKS 248 (321)
T ss_dssp TTSCHHHHHHHHTTSCSSGGG
T ss_pred ccCCHHHHHHHHHHcCCChhH
Confidence 112345889999999999974
No 77
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.97 E-value=3.1e-32 Score=284.88 Aligned_cols=220 Identities=23% Similarity=0.311 Sum_probs=162.0
Q ss_pred CccccCcccccccccccceeee------cCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh-hcCcccc--------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQ------LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM-ERGSLFR-------- 432 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~------~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l-~~gsL~~-------- 432 (602)
.++|...+.||+|+||.||+|+ ..+++.||||+++..... ...+.+.+|++++..+ .|+++..
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 98 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGACTKP 98 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCH--HHHHHHHHHHHHHHhhcCCcceeeeeeeeecC
Confidence 5689999999999999999996 245789999999765432 2346788899888555 3444443
Q ss_pred ------------------ccccccc-------------------------------------------------------
Q 047576 433 ------------------ILHNDAE------------------------------------------------------- 439 (602)
Q Consensus 433 ------------------~l~~~~~------------------------------------------------------- 439 (602)
++.....
T Consensus 99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (359)
T 3vhe_A 99 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 178 (359)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------------
T ss_pred CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhh
Confidence 3322110
Q ss_pred --------hhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC--Ccccc
Q 047576 440 --------AVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NQTLL 509 (602)
Q Consensus 440 --------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~--~~~~~ 509 (602)
...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....... .....
T Consensus 179 ~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 255 (359)
T 3vhe_A 179 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255 (359)
T ss_dssp -----CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--C
T ss_pred cccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhcccc
Confidence 111889999999999999999999 78999999999999999999999999999987644322 22335
Q ss_pred ccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHHHHHHH
Q 047576 510 AGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQDILLV 588 (602)
Q Consensus 510 ~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l 588 (602)
.||+.|+|||++.+..++.++||||||+++|||+| |+.||..... .......+......+.... ....+
T Consensus 256 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~l 325 (359)
T 3vhe_A 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-------DEEFCRRLKEGTRMRAPDY---TTPEM 325 (359)
T ss_dssp EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-------SHHHHHHHHHTCCCCCCTT---CCHHH
T ss_pred CCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccch-------hHHHHHHHHcCCCCCCCCC---CCHHH
Confidence 68889999999999999999999999999999999 9999975321 1111222222211111111 22347
Q ss_pred HHHHhhccCcCCCC
Q 047576 589 STISFACLQSNPKS 602 (602)
Q Consensus 589 ~~l~~~Cl~~dP~e 602 (602)
.+++..||+.||++
T Consensus 326 ~~li~~~l~~dP~~ 339 (359)
T 3vhe_A 326 YQTMLDCWHGEPSQ 339 (359)
T ss_dssp HHHHHHHTCSSGGG
T ss_pred HHHHHHHccCChhh
Confidence 89999999999974
No 78
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.97 E-value=5.5e-32 Score=279.60 Aligned_cols=217 Identities=27% Similarity=0.381 Sum_probs=160.2
Q ss_pred CccccCcccccccccccceeeecC----CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhc----------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP----NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER---------------- 427 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~---------------- 427 (602)
..+|...+.||+|+||.||+|+.. .+..||||+++..... ...+.+.+|+.++..+.|
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTE--RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCH--HHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCH--HHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence 457888999999999999999864 4556999999765332 234678889998855544
Q ss_pred ---------CccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccc
Q 047576 428 ---------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARL 498 (602)
Q Consensus 428 ---------gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~ 498 (602)
|+|.+++.. ....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 126 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRT--HDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEEEECCTTCBHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEEeeCCCCCcHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 444444432 1235889999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCC---ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCC
Q 047576 499 LHADSSN---QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLP 574 (602)
Q Consensus 499 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~ 574 (602)
....... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+. ....
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-------~~~~~~~~-~~~~ 272 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN-------RDVISSVE-EGYR 272 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH-------HHHHHHHH-TTCC
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH-------HHHHHHHH-cCCC
Confidence 6543222 112345778999999998899999999999999999999 9999974321 11112222 2222
Q ss_pred CCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 575 PPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 575 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.+.... ....+.+++..||+.||++
T Consensus 273 ~~~~~~---~~~~l~~li~~~l~~dp~~ 297 (325)
T 3kul_A 273 LPAPMG---CPHALHQLMLDCWHKDRAQ 297 (325)
T ss_dssp CCCCTT---CCHHHHHHHHHHTCSSGGG
T ss_pred CCCCCC---cCHHHHHHHHHHccCChhh
Confidence 222111 2345889999999999974
No 79
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.97 E-value=4.1e-32 Score=286.45 Aligned_cols=217 Identities=23% Similarity=0.304 Sum_probs=163.5
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccc--------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFR-------------- 432 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~-------------- 432 (602)
.++|...+.||+|+||.||+|+.. +++.||||+++..... ...+.|.+|+.++..+.|+++..
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 190 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPP--DLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV 190 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCH--HHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCH--HHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence 457888899999999999999875 7899999998754322 34567889999986555555444
Q ss_pred -----------ccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 433 -----------ILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 433 -----------~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
++.. ....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 191 ~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 191 MELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp EECCTTCBHHHHHHH--HGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred EEcCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 3332 1234889999999999999999999 78999999999999999999999999999986533
Q ss_pred CCCC--ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCC
Q 047576 502 DSSN--QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVD 578 (602)
Q Consensus 502 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 578 (602)
.... .....+++.|+|||++.+..++.++|||||||++|||+| |+.||..... ....+.+......+..
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~ 337 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN--------QQTREFVEKGGRLPCP 337 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH--------HHHHHHHHTTCCCCCC
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCCC
Confidence 2111 111235678999999998899999999999999999998 9999975321 1122233322222222
Q ss_pred hhhHHHHHHHHHHHhhccCcCCCC
Q 047576 579 RKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 579 ~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.. ....+.+++..||+.||++
T Consensus 338 ~~---~~~~l~~li~~cl~~dP~~ 358 (377)
T 3cbl_A 338 EL---CPDAVFRLMEQCWAYEPGQ 358 (377)
T ss_dssp TT---CCHHHHHHHHHHTCSSGGG
T ss_pred CC---CCHHHHHHHHHHcCCCchh
Confidence 21 2345889999999999974
No 80
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.97 E-value=3.5e-32 Score=275.89 Aligned_cols=180 Identities=26% Similarity=0.350 Sum_probs=145.2
Q ss_pred ccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc----------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA---------- 438 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~---------- 438 (602)
++|...+.||+|+||.||+|+..+|+.||+|++...... ....+.+.+|+.++..+.|+++..++....
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED-EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG-GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc-cccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 468888999999999999999888999999998755432 123356778999998888888776654210
Q ss_pred ------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCCc
Q 047576 439 ------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQ 506 (602)
Q Consensus 439 ------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~~ 506 (602)
....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (288)
T 1ob3_A 81 HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157 (288)
T ss_dssp CCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred ecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccccc
Confidence 1234788999999999999999999 7899999999999999999999999999998765433333
Q ss_pred cccccccccccccccccC-cCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 507 TLLAGSYGYIAPELAYTM-VMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 507 ~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
....||+.|+|||++.+. .++.++||||+||++|||+||+.||...
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 204 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV 204 (288)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 445789999999998764 5899999999999999999999999754
No 81
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.97 E-value=5.4e-32 Score=283.54 Aligned_cols=224 Identities=19% Similarity=0.242 Sum_probs=165.7
Q ss_pred CCccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHH---HHhhhhHhHHHHHHhhhcCccccccccc-----
Q 047576 367 TPRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEEL---AFIRSFRNEAQVLSQMERGSLFRILHND----- 437 (602)
Q Consensus 367 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~---~~~~~~~~E~~il~~l~~gsL~~~l~~~----- 437 (602)
..+.|...+.||+|+||.||+|+.. +|+.||+|+++....... ...+.+.+|+.++..+.|+++..++...
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 3567999999999999999999865 689999999875433210 1235678899988555555544432210
Q ss_pred -----------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCC----cceeeccccc
Q 047576 438 -----------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKL----EAFVADFGTA 496 (602)
Q Consensus 438 -----------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~----~~kL~DFG~a 496 (602)
.....+++.++..++.||+.||+||| +.+|+||||||+||+++.++ .+||+|||++
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 01234899999999999999999999 78999999999999998776 7999999999
Q ss_pred ccccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCC
Q 047576 497 RLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPP 576 (602)
Q Consensus 497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~ 576 (602)
....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ....+..+.......+
T Consensus 167 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~-------~~~~~~~i~~~~~~~~ 238 (361)
T 2yab_A 167 HEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-------KQETLANITAVSYDFD 238 (361)
T ss_dssp EECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-------HHHHHHHHHTTCCCCC
T ss_pred eEcCCCC-ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhcCCCCC
Confidence 8765432 2334579999999999999899999999999999999999999997532 1222233333322211
Q ss_pred CChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 577 VDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 577 ~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
. +........+.+++..|+++||++
T Consensus 239 ~-~~~~~~s~~~~~li~~~L~~dP~~ 263 (361)
T 2yab_A 239 E-EFFSQTSELAKDFIRKLLVKETRK 263 (361)
T ss_dssp H-HHHTTSCHHHHHHHHHHSCSSTTT
T ss_pred c-hhccCCCHHHHHHHHHHCCCChhH
Confidence 1 000112234789999999999975
No 82
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97 E-value=2.6e-32 Score=291.44 Aligned_cols=212 Identities=17% Similarity=0.181 Sum_probs=155.9
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhc-------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER------------------- 427 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~------------------- 427 (602)
++.|...+.||+|+||.||+|+. .+|+.||||++...........+.+.+|+.++..+.+
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 45688889999999999999984 5799999999884443333345567777776655543
Q ss_pred --------------------------------Ccccccccc----ccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeE
Q 047576 428 --------------------------------GSLFRILHN----DAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471 (602)
Q Consensus 428 --------------------------------gsL~~~l~~----~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iv 471 (602)
++|.+++.. ......+++..+..++.|+++||+||| +++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ii 233 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 233 (413)
T ss_dssp EECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred cccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 222222211 011345888999999999999999999 78999
Q ss_pred EeCCCCCCeeeCCCCcceeecccccccccCCCCCcccccccccccccccc----------ccCcCCccchhHHHHHHHHH
Q 047576 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELA----------YTMVMTEKYDVYSFGVVTLE 541 (602)
Q Consensus 472 H~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwSlGvil~e 541 (602)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++||
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999998865433 233467 999999998 55568899999999999999
Q ss_pred HHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 542 VLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 542 lltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
|+||+.||...... .....++.... ..+ ..+.+++.+||+.||++
T Consensus 310 lltg~~Pf~~~~~~-------~~~~~~~~~~~--~~~-------~~~~~li~~~l~~dP~~ 354 (413)
T 3dzo_A 310 IWCADLPNTDDAAL-------GGSEWIFRSCK--NIP-------QPVRALLEGFLRYPKED 354 (413)
T ss_dssp HHHSSCCCCTTGGG-------SCSGGGGSSCC--CCC-------HHHHHHHHHHTCSSGGG
T ss_pred HHHCCCCCCCcchh-------hhHHHHHhhcc--cCC-------HHHHHHHHHHccCChhh
Confidence 99999999753321 11122222111 111 33788999999999974
No 83
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.97 E-value=5.8e-32 Score=272.47 Aligned_cols=218 Identities=22% Similarity=0.405 Sum_probs=145.1
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|.....||+|+||.||+|+. .+|+.||+|++...........+.+.+|+.++..+.|+++..++...
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35788999999999999999986 57899999998655433333456788899998777766665543211
Q ss_pred --------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCC
Q 047576 438 --------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS 503 (602)
Q Consensus 438 --------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~ 503 (602)
.....+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||.+.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 01134789999999999999999999 7899999999999999999999999999998765433
Q ss_pred CCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhcc--CCCCCCChhh
Q 047576 504 SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ--RLPPPVDRKV 581 (602)
Q Consensus 504 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~--~l~~~~~~~~ 581 (602)
.......|++.|+|||++.+..++.++||||+|+++|||++|+.||....... .+..+... ..+...+
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~--- 236 (278)
T 3cok_A 167 EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-------TLNKVVLADYEMPSFLS--- 236 (278)
T ss_dssp -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------CCSSCCCCCTTSC---
T ss_pred CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-------HHHHHhhcccCCccccC---
Confidence 33334578999999999998889999999999999999999999997532211 11111111 1222222
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
..+.+++.+|++.||++
T Consensus 237 ----~~~~~li~~~l~~dp~~ 253 (278)
T 3cok_A 237 ----IEAKDLIHQLLRRNPAD 253 (278)
T ss_dssp ----HHHHHHHHHHSCSSGGG
T ss_pred ----HHHHHHHHHHcccCHhh
Confidence 24779999999999974
No 84
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.97 E-value=1e-31 Score=284.69 Aligned_cols=220 Identities=22% Similarity=0.340 Sum_probs=164.0
Q ss_pred ccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhc--Cccccccccc---------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER--GSLFRILHND--------- 437 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~--gsL~~~l~~~--------- 437 (602)
+.|...+.||+|+||.||+|...+++.||||++...... ....+.+.+|+.++..+.+ +++..++...
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEeccccc-HHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 468999999999999999999888999999998654332 2345778899999988764 5565544211
Q ss_pred ------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC-
Q 047576 438 ------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS- 504 (602)
Q Consensus 438 ------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~- 504 (602)
.....+++.++..++.||+.||.||| +.+|+||||||+|||++ ++.+||+|||+++.......
T Consensus 135 ~E~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 135 MECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp EECCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred EecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 01224688899999999999999999 88999999999999996 57899999999987654322
Q ss_pred -Ccccccccccccccccccc-----------CcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccC
Q 047576 505 -NQTLLAGSYGYIAPELAYT-----------MVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQR 572 (602)
Q Consensus 505 -~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~ 572 (602)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .....+..++++.
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~------~~~~~~~~~~~~~ 284 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII------NQISKLHAIIDPN 284 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC------CHHHHHHHHHCTT
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh------HHHHHHHHHhCcc
Confidence 1234579999999999865 368899999999999999999999997421 1123345555554
Q ss_pred CCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 573 LPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 573 l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
...+.... ....+.+++.+||+.||++
T Consensus 285 ~~~~~~~~---~~~~~~~li~~~L~~dP~~ 311 (390)
T 2zmd_A 285 HEIEFPDI---PEKDLQDVLKCCLKRDPKQ 311 (390)
T ss_dssp SCCCCCCC---SCHHHHHHHHHHTCSSTTT
T ss_pred ccCCCCcc---chHHHHHHHHHHcccChhh
Confidence 43322221 1234789999999999975
No 85
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.97 E-value=3.8e-32 Score=286.20 Aligned_cols=217 Identities=27% Similarity=0.401 Sum_probs=152.1
Q ss_pred CccccCcccccccccccceeeecC----CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhc----------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP----NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER---------------- 427 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~---------------- 427 (602)
..+|...+.||+|+||.||+|+.. ++..||||+++..... ...+.|.+|+.++..+.|
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE--KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCH--HHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCH--HHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence 467999999999999999999864 5778999999754322 235678899998855544
Q ss_pred ---------CccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccc
Q 047576 428 ---------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARL 498 (602)
Q Consensus 428 ---------gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~ 498 (602)
|+|.++++.. ...+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 4444444321 235899999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCC---ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCC
Q 047576 499 LHADSSN---QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLP 574 (602)
Q Consensus 499 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~ 574 (602)
....... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......++....
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~--------~~~~~~i~~~~~ 268 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN--------QDVIKAVDEGYR 268 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH--------HHHHHHHHTTEE
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCC
Confidence 6543221 112235678999999999999999999999999999998 9999974321 112222222222
Q ss_pred CCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 575 PPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 575 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.+.... ....+.+++..||+.||++
T Consensus 269 ~~~~~~---~~~~l~~li~~cl~~dp~~ 293 (373)
T 2qol_A 269 LPPPMD---CPAALYQLMLDCWQKDRNN 293 (373)
T ss_dssp CCCCTT---CBHHHHHHHHHHTCSSGGG
T ss_pred CCCCcc---ccHHHHHHHHHHhCcChhh
Confidence 111111 3345889999999999974
No 86
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.97 E-value=3e-32 Score=284.66 Aligned_cols=223 Identities=19% Similarity=0.246 Sum_probs=166.7
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHH--HHhhhhHhHHHHHHhhhcCccccccccc-------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEEL--AFIRSFRNEAQVLSQMERGSLFRILHND------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~--~~~~~~~~E~~il~~l~~gsL~~~l~~~------- 437 (602)
.+.|...+.||+|+||.||+|+. .+|+.||||++........ ...+.+.+|+.++..+.|+++..++...
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46789999999999999999986 4789999999854322110 1235688899999777776666544311
Q ss_pred ------------------c-chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCc---ceeecccc
Q 047576 438 ------------------A-EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLE---AFVADFGT 495 (602)
Q Consensus 438 ------------------~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~---~kL~DFG~ 495 (602)
. ....+++..+..++.||+.||+||| +++|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 0 0113788899999999999999999 789999999999999987654 99999999
Q ss_pred cccccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCC
Q 047576 496 ARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPP 575 (602)
Q Consensus 496 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~ 575 (602)
+..............||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ......+.......
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~i~~~~~~~ 251 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK--------ERLFEGIIKGKYKM 251 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH--------HHHHHHHHHTCCCC
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH--------HHHHHHHHcCCCCC
Confidence 9877654443445679999999999999999999999999999999999999997521 12223333333322
Q ss_pred CCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 576 PVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 576 ~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
+. +........+.+++.+|++.||++
T Consensus 252 ~~-~~~~~~s~~~~~li~~~L~~dP~~ 277 (351)
T 3c0i_A 252 NP-RQWSHISESAKDLVRRMLMLDPAE 277 (351)
T ss_dssp CH-HHHTTSCHHHHHHHHHHTCSSTTT
T ss_pred Cc-cccccCCHHHHHHHHHHCCCChhH
Confidence 11 100112345789999999999975
No 87
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.97 E-value=1.2e-31 Score=290.53 Aligned_cols=219 Identities=23% Similarity=0.329 Sum_probs=167.7
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
..+|.....||+|+||.||+|+.. +|+.||||++...........+.+.+|+.++..+.|+++..++...
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 457889999999999999999865 7999999999755443333456788999998666555554433210
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS 504 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~ 504 (602)
.....+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~- 170 (476)
T 2y94_A 95 MEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE- 170 (476)
T ss_dssp EECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC-
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc-
Confidence 01234889999999999999999999 8899999999999999999999999999998765432
Q ss_pred CccccccccccccccccccCcC-CccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHH
Q 047576 505 NQTLLAGSYGYIAPELAYTMVM-TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQ 583 (602)
Q Consensus 505 ~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 583 (602)
......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||+.... ......+.+.....+..
T Consensus 171 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-------~~~~~~i~~~~~~~p~~----- 238 (476)
T 2y94_A 171 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV-------PTLFKKICDGIFYTPQY----- 238 (476)
T ss_dssp CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS-------HHHHHHHHTTCCCCCTT-----
T ss_pred cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH-------HHHHHHHhcCCcCCCcc-----
Confidence 2334579999999999988765 6899999999999999999999974321 12233344443332211
Q ss_pred HHHHHHHHHhhccCcCCCC
Q 047576 584 DILLVSTISFACLQSNPKS 602 (602)
Q Consensus 584 ~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+|++.||++
T Consensus 239 ~s~~~~~Li~~~L~~dP~~ 257 (476)
T 2y94_A 239 LNPSVISLLKHMLQVDPMK 257 (476)
T ss_dssp CCHHHHHHHHHHTCSSTTT
T ss_pred CCHHHHHHHHHHcCCCchh
Confidence 1123788999999999975
No 88
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.97 E-value=2.7e-32 Score=277.56 Aligned_cols=226 Identities=22% Similarity=0.325 Sum_probs=161.6
Q ss_pred CccccCcccccccccccceeeec-----CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc-----
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-----PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND----- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~----- 437 (602)
.++|...+.||+|+||.||+|++ .+++.||||++...... ..+.+.+|+.++..+.|+++..++...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHH---HHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHH---HHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 46799999999999999999973 36899999998765433 346788899988666666555443210
Q ss_pred --------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccc
Q 047576 438 --------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTAR 497 (602)
Q Consensus 438 --------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~ 497 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred CceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 01234889999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCC---CccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccc-----cCCCcc---cchh
Q 047576 498 LLHADSS---NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLS-----SSYDPK---IMLI 566 (602)
Q Consensus 498 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~-----~~~~~~---~~~~ 566 (602)
....... ......++..|+|||++.+..++.++||||||+++|||+||..||....... ...... ....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHH
Confidence 7654322 1222356778999999999999999999999999999999999987432110 000000 0112
Q ss_pred hhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 567 DVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 567 ~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
+.+......+.... ....+.+++..||+.||++
T Consensus 243 ~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~ 275 (295)
T 3ugc_A 243 ELLKNNGRLPRPDG---CPDEIYMIMTECWNNNVNQ 275 (295)
T ss_dssp HHHHTTCCCCCCTT---CCHHHHHHHHHHSCSSGGG
T ss_pred HHHhccCcCCCCcC---cCHHHHHHHHHHcCCChhh
Confidence 22222222222221 3345889999999999974
No 89
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.97 E-value=4.9e-32 Score=297.98 Aligned_cols=220 Identities=21% Similarity=0.273 Sum_probs=166.2
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhh--------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME-------------------- 426 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~-------------------- 426 (602)
.++|...+.||+|+||.||+|+.. +|+.||+|++.............+.+|+.++..+.
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999864 79999999997654433334456778998885444
Q ss_pred -----cCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 427 -----RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 427 -----~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
+|+|.+++.... ...+++..+..|+.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 263 mEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp ECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 445544443321 223889999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhcc--CCCCCCCh
Q 047576 502 DSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ--RLPPPVDR 579 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~--~l~~~~~~ 579 (602)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .........+... .++...+
T Consensus 339 ~~-~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~---~~~~~i~~~i~~~~~~~p~~~s- 413 (576)
T 2acx_A 339 GQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK---IKREEVERLVKEVPEEYSERFS- 413 (576)
T ss_dssp TC-CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC---CCHHHHHHHHHHCCCCCCTTSC-
T ss_pred Cc-cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccc---hhHHHHHHHhhcccccCCccCC-
Confidence 33 233457999999999999989999999999999999999999999753211 1111111112211 1222222
Q ss_pred hhHHHHHHHHHHHhhccCcCCCC
Q 047576 580 KVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 580 ~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
..+.+++.+|+++||++
T Consensus 414 ------~~~~dLI~~lL~~dP~~ 430 (576)
T 2acx_A 414 ------PQARSLCSQLLCKDPAE 430 (576)
T ss_dssp ------HHHHHHHHHHTCSSGGG
T ss_pred ------HHHHHHHHHhccCCHHH
Confidence 34788999999999974
No 90
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.97 E-value=3e-31 Score=271.21 Aligned_cols=221 Identities=28% Similarity=0.463 Sum_probs=163.9
Q ss_pred CcccccccccccceeeecCCCcEEeeeccCCchh-HHHHHhhhhHhHHHHHHhhhcCccccc------------------
Q 047576 373 SKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPET-EELAFIRSFRNEAQVLSQMERGSLFRI------------------ 433 (602)
Q Consensus 373 ~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~-~~~~~~~~~~~E~~il~~l~~gsL~~~------------------ 433 (602)
..+.||+|+||.||+|+. +++.||||++..... ......+.+.+|+.++..+.|+++..+
T Consensus 35 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 113 (307)
T 2nru_A 35 GGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMP 113 (307)
T ss_dssp TCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred cCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecC
Confidence 348899999999999987 688999998865321 112235678889998866655555443
Q ss_pred -------cccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCC-
Q 047576 434 -------LHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN- 505 (602)
Q Consensus 434 -------l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~- 505 (602)
+........+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.........
T Consensus 114 ~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 190 (307)
T 2nru_A 114 NGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190 (307)
T ss_dssp TCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCE
T ss_pred CCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccc
Confidence 332222334889999999999999999999 789999999999999999999999999999876543221
Q ss_pred -ccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCC-------CcccchhhhhccCCCCCC
Q 047576 506 -QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY-------DPKIMLIDVLDQRLPPPV 577 (602)
Q Consensus 506 -~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~-------~~~~~~~~~~d~~l~~~~ 577 (602)
.....|++.|+|||++.+ .++.++||||||+++|+|++|+.||+......... .....+.+.+++.+....
T Consensus 191 ~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (307)
T 2nru_A 191 MTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDAD 269 (307)
T ss_dssp ECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCC
T ss_pred cccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccc
Confidence 223468999999998765 47899999999999999999999997543221100 111223444555444322
Q ss_pred ChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 578 DRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 578 ~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
......+.+++..||+.||++
T Consensus 270 ----~~~~~~l~~li~~cl~~~p~~ 290 (307)
T 2nru_A 270 ----STSVEAMYSVASQCLHEKKNK 290 (307)
T ss_dssp ----HHHHHHHHHHHHHHTCSSTTT
T ss_pred ----hHHHHHHHHHHHHHcCCCccc
Confidence 335667899999999999975
No 91
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.97 E-value=1.1e-31 Score=275.54 Aligned_cols=215 Identities=24% Similarity=0.294 Sum_probs=154.1
Q ss_pred ccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh-hcCccccccccc---------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM-ERGSLFRILHND--------- 437 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l-~~gsL~~~l~~~--------- 437 (602)
++|+....||+|+||+||+|+.. +|+.||||++......... ...+..|+..+... .|+++..++...
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKD-RARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHH-HHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHH-HHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 57888999999999999999875 7999999988654333222 23334444444322 555555443211
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS 504 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~ 504 (602)
.....++|.++..|+.|++.||+||| +.+|+||||||+|||++.++.+||+|||++.......
T Consensus 136 ~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~- 211 (311)
T 3p1a_A 136 TELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG- 211 (311)
T ss_dssp EECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred EeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence 01234899999999999999999999 7899999999999999999999999999988764432
Q ss_pred CccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHHH
Q 047576 505 NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQD 584 (602)
Q Consensus 505 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 584 (602)
......||+.|+|||++.+ .++.++|||||||++|||++|..||..... ...+.+...++.... ..
T Consensus 212 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~----------~~~~~~~~~~~~~~~---~~ 277 (311)
T 3p1a_A 212 AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG----------WQQLRQGYLPPEFTA---GL 277 (311)
T ss_dssp ---CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH----------HHHHTTTCCCHHHHT---TS
T ss_pred CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH----------HHHHhccCCCccccc---CC
Confidence 2334569999999998876 789999999999999999999877653221 122222222211111 12
Q ss_pred HHHHHHHHhhccCcCCCC
Q 047576 585 ILLVSTISFACLQSNPKS 602 (602)
Q Consensus 585 ~~~l~~l~~~Cl~~dP~e 602 (602)
...+.+++.+|++.||++
T Consensus 278 ~~~l~~li~~~L~~dP~~ 295 (311)
T 3p1a_A 278 SSELRSVLVMMLEPDPKL 295 (311)
T ss_dssp CHHHHHHHHHHSCSSTTT
T ss_pred CHHHHHHHHHHcCCChhh
Confidence 244889999999999975
No 92
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.97 E-value=2e-31 Score=269.80 Aligned_cols=221 Identities=26% Similarity=0.416 Sum_probs=162.5
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHH----HHhhhhHhHHHHHHhhhcCccccccccc-----
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEEL----AFIRSFRNEAQVLSQMERGSLFRILHND----- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~----~~~~~~~~E~~il~~l~~gsL~~~l~~~----- 437 (602)
.++|...+.||+|+||.||+|+. .+++.||+|++........ ...+.+.+|+.++..+.|+++..++...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 97 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR 97 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTTE
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCCe
Confidence 46799999999999999999986 4789999999865433211 1225788899998666665555443210
Q ss_pred ----------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCC--eEEeCCCCCCeeeCCCCc-----ceeeccc
Q 047576 438 ----------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPS--VVHRDISSNNILLNSKLE-----AFVADFG 494 (602)
Q Consensus 438 ----------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~DLkp~NILld~~~~-----~kL~DFG 494 (602)
.....+++..+..++.|++.||+||| +.+ |+||||||+||+++.++. +||+|||
T Consensus 98 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 98 MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp EEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred EEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 01234889999999999999999999 778 999999999999988776 9999999
Q ss_pred ccccccCCCCCccccccccccccccccc--cCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccC
Q 047576 495 TARLLHADSSNQTLLAGSYGYIAPELAY--TMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQR 572 (602)
Q Consensus 495 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~ 572 (602)
+++.... ......||+.|+|||++. ...++.++||||+|+++|||++|+.||..... ........+....
T Consensus 175 ~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~ 246 (287)
T 4f0f_A 175 LSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY-----GKIKFINMIREEG 246 (287)
T ss_dssp TCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC-----CHHHHHHHHHHSC
T ss_pred ccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccc-----cHHHHHHHHhccC
Confidence 9975432 233457899999999984 45578999999999999999999999974321 1111122222222
Q ss_pred CCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 573 LPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 573 l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
..+..... ....+.+++..||+.||++
T Consensus 247 ~~~~~~~~---~~~~l~~li~~~l~~dp~~ 273 (287)
T 4f0f_A 247 LRPTIPED---CPPRLRNVIELCWSGDPKK 273 (287)
T ss_dssp CCCCCCTT---SCHHHHHHHHHHTCSSGGG
T ss_pred CCCCCCcc---cCHHHHHHHHHHhcCChhh
Confidence 32222222 2344889999999999974
No 93
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.97 E-value=9.1e-32 Score=282.18 Aligned_cols=222 Identities=22% Similarity=0.305 Sum_probs=166.6
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|...+.||+|+||.||+|+.. +|+.||+|++....... ...+.+.+|+.++..+.|+++..++...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCH-HHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 457899999999999999999864 68999999987554322 2346788999999777776665543311
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCC---cceeecccccccccC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKL---EAFVADFGTARLLHA 501 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~---~~kL~DFG~a~~~~~ 501 (602)
.....+++.++..++.||+.||+||| +.+|+||||||+||+++.++ .+||+|||++.....
T Consensus 107 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp ECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 01234789999999999999999999 78999999999999998654 599999999987653
Q ss_pred CCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhh
Q 047576 502 DSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
.. ......||+.|+|||++.+..++.++||||+||++|+|++|+.||..... ......+.......+... .
T Consensus 184 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-------~~~~~~i~~~~~~~~~~~-~ 254 (362)
T 2bdw_A 184 SE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-------HRLYAQIKAGAYDYPSPE-W 254 (362)
T ss_dssp CC-SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCCCCCTTG-G
T ss_pred Cc-ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhCCCCCCccc-c
Confidence 32 23346799999999999998999999999999999999999999974321 122223333332222110 0
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
......+.+++.+|++.||++
T Consensus 255 ~~~~~~~~~li~~~L~~dP~~ 275 (362)
T 2bdw_A 255 DTVTPEAKSLIDSMLTVNPKK 275 (362)
T ss_dssp GGSCHHHHHHHHHHSCSSGGG
T ss_pred cCCCHHHHHHHHHHcCCChhh
Confidence 112344789999999999974
No 94
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=8.6e-31 Score=268.03 Aligned_cols=247 Identities=25% Similarity=0.313 Sum_probs=212.9
Q ss_pred CCCCCCCceeCCCCCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCc-cCCCCCCCCEEECcCCcC
Q 047576 89 DHCEWIGITCNSAGSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPS-EISALSKLQLLDLSSNRL 167 (602)
Q Consensus 89 ~~C~w~gv~C~~~~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~-~l~~L~~L~~L~Ls~N~i 167 (602)
..|.|.+|.|+..+ ++.+..+..++++.|++. ++++. .+|. .|+++++|++|+|++|++
T Consensus 5 C~C~~~~l~c~~~~-----------------l~~ip~~~~~~l~~L~L~--~n~l~-~i~~~~~~~l~~L~~L~L~~n~l 64 (306)
T 2z66_A 5 CSCSGTEIRCNSKG-----------------LTSVPTGIPSSATRLELE--SNKLQ-SLPHGVFDKLTQLTKLSLSSNGL 64 (306)
T ss_dssp CEEETTEEECCSSC-----------------CSSCCSCCCTTCCEEECC--SSCCC-CCCTTTTTTCTTCSEEECCSSCC
T ss_pred CeeCCCEEEcCCCC-----------------cccCCCCCCCCCCEEECC--CCccC-ccCHhHhhccccCCEEECCCCcc
Confidence 45899999997532 122223334677777775 44444 6665 479999999999999998
Q ss_pred cc---------cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCc-ccccCcCCCceeecccccCCC-Cc
Q 047576 168 RG---------RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIP-LTLSRLTSLKILILAQNQLSG-LP 236 (602)
Q Consensus 168 ~~---------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~-ip 236 (602)
+. .+++|++|+|++|.++. +|..+..+++|++|+|++|++++..+ ..+..+++|++|++++|++++ .|
T Consensus 65 ~~~~~~~~~~~~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 143 (306)
T 2z66_A 65 SFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFN 143 (306)
T ss_dssp CEEEEEEHHHHSCSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECST
T ss_pred CcccCcccccccccccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccch
Confidence 72 37999999999999984 67779999999999999999987665 679999999999999999998 56
Q ss_pred ccccCCCCCcEEEccCCCCCC-CCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCC
Q 047576 237 QEIGNLKNLMLLDVGNNDIIG-PIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASME 315 (602)
Q Consensus 237 ~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 315 (602)
..+.++++|++|++++|.+++ .+|..+..+++|++|++++|++++..|..+..+++|+.|+|++|++++..+..+..++
T Consensus 144 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 223 (306)
T 2z66_A 144 GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLN 223 (306)
T ss_dssp TTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCT
T ss_pred hhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcc
Confidence 778999999999999999987 6789999999999999999999998899999999999999999999988777899999
Q ss_pred CCCEEeCCCCCCCCCCCccccccc-ccccccccCCcCCCccC
Q 047576 316 DLTWLDLSNNNIKGSIPGEITKLS-RLDYLNLSGNKLSGRVP 356 (602)
Q Consensus 316 ~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~g~~p 356 (602)
+|+.|+|++|++++..|..+..++ +|+.|++++|++++.-+
T Consensus 224 ~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 224 SLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp TCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred cCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 999999999999999999999985 99999999999988643
No 95
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.97 E-value=1.5e-31 Score=269.08 Aligned_cols=219 Identities=21% Similarity=0.280 Sum_probs=147.8
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc--------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA-------- 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~-------- 438 (602)
.++|...+.||+|+||.||+|+. .+|+.||+|++...........+.+.+|+.++..+.|+++..++....
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 46799999999999999999985 478999999998665444445667889999998888888776554210
Q ss_pred -------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCC
Q 047576 439 -------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 505 (602)
Q Consensus 439 -------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~ 505 (602)
....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+........
T Consensus 92 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 167 (275)
T 2eue_A 92 IEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF- 167 (275)
T ss_dssp EECCCEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC---------
T ss_pred ehhcCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCccc-
Confidence 1234789999999999999999999 78999999999999999999999999999987654322
Q ss_pred ccccccccccccccccccCcC-CccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHHH
Q 047576 506 QTLLAGSYGYIAPELAYTMVM-TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQD 584 (602)
Q Consensus 506 ~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 584 (602)
.....||+.|+|||++.+..+ +.++||||+|+++|||++|+.||+.... ......+.......+.. .
T Consensus 168 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~~~~~-----~ 235 (275)
T 2eue_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-------PVLFKNISNGVYTLPKF-----L 235 (275)
T ss_dssp -------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCCCCCTT-----S
T ss_pred ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCCCCcc-----C
Confidence 233568999999999988765 7899999999999999999999975321 11122222222221111 1
Q ss_pred HHHHHHHHhhccCcCCCC
Q 047576 585 ILLVSTISFACLQSNPKS 602 (602)
Q Consensus 585 ~~~l~~l~~~Cl~~dP~e 602 (602)
...+.+++.+|++.||++
T Consensus 236 ~~~~~~li~~~l~~dP~~ 253 (275)
T 2eue_A 236 SPGAAGLIKRMLIVNPLN 253 (275)
T ss_dssp CHHHHHHHHHHSCSSGGG
T ss_pred CHHHHHHHHHHhhcCHhH
Confidence 233778999999999974
No 96
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.97 E-value=1.1e-31 Score=268.83 Aligned_cols=217 Identities=22% Similarity=0.314 Sum_probs=162.7
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc----------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND---------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~---------- 437 (602)
.++|.....||+|+||.||+|+..++..||+|++...... .+.+.+|+.++..+.|+++..++...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS----EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence 4678899999999999999999988889999999765433 24577888888666655554433210
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS 504 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~ 504 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+........
T Consensus 83 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 83 EYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred EccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 01234899999999999999999999 78999999999999999999999999999987654322
Q ss_pred C-ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhH
Q 047576 505 N-QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVI 582 (602)
Q Consensus 505 ~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 582 (602)
. .....+++.|+|||++.+..++.++||||+|+++|+|+| |+.||+.... ......+...... .....
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~~~~~~~~~~~~-~~~~~-- 229 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN-------SEVVLKVSQGHRL-YRPHL-- 229 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH-------HHHHHHHHTTCCC-CCCTT--
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh-------HHHHHHHHcCCCC-CCCCc--
Confidence 1 122346678999999998889999999999999999999 9999975322 1111122211111 11111
Q ss_pred HHHHHHHHHHhhccCcCCCC
Q 047576 583 QDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 583 ~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++..||+.||++
T Consensus 230 -~~~~l~~li~~~l~~~p~~ 248 (268)
T 3sxs_A 230 -ASDTIYQIMYSCWHELPEK 248 (268)
T ss_dssp -SCHHHHHHHHHTTCSSGGG
T ss_pred -ChHHHHHHHHHHcCCChhh
Confidence 1234788999999999974
No 97
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.97 E-value=5.5e-32 Score=292.55 Aligned_cols=216 Identities=24% Similarity=0.404 Sum_probs=163.9
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhc--------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER-------------------- 427 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~-------------------- 427 (602)
.++|...+.||+|+||.||+|+..+++.||||+++.... ..+.|.+|+.++..+.|
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e 262 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITE 262 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB----CHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc----cHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEe
Confidence 467888999999999999999998889999999976443 24678889998855554
Q ss_pred ----CccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCC
Q 047576 428 ----GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS 503 (602)
Q Consensus 428 ----gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~ 503 (602)
|+|.++++.. ....+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 263 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~ 338 (454)
T 1qcf_A 263 FMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338 (454)
T ss_dssp CCTTCBHHHHHHSH-HHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred ecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence 4444444321 1235788899999999999999999 7899999999999999999999999999998764321
Q ss_pred C-CccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCChhh
Q 047576 504 S-NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 504 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
. ......++..|+|||++.+..++.++|||||||++|||+| |+.||..... ...... +......+....
T Consensus 339 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~-------~~~~~~-i~~~~~~~~~~~- 409 (454)
T 1qcf_A 339 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-------PEVIRA-LERGYRMPRPEN- 409 (454)
T ss_dssp HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------HHHHHH-HHHTCCCCCCTT-
T ss_pred eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH-------HHHHHH-HHcCCCCCCCCC-
Confidence 1 1122346788999999998899999999999999999999 9999974321 111122 222222121111
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++..||+.||++
T Consensus 410 --~~~~l~~li~~cl~~dp~~ 428 (454)
T 1qcf_A 410 --CPEELYNIMMRCWKNRPEE 428 (454)
T ss_dssp --SCHHHHHHHHHHTCSSGGG
T ss_pred --CCHHHHHHHHHHccCChhH
Confidence 3345889999999999974
No 98
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.97 E-value=6.9e-32 Score=270.72 Aligned_cols=217 Identities=24% Similarity=0.323 Sum_probs=163.2
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc----------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND---------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~---------- 437 (602)
.++|...+.||+|+||.||+|+..+++.||+|++...... .+.+.+|+.++..+.|+++..++...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 84 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC----HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence 4678999999999999999999888999999999765433 24578899988666655554433210
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCC-
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS- 503 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~- 503 (602)
.....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 85 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp ECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred EeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 01234789999999999999999999 7899999999999999999999999999998664321
Q ss_pred CCccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhH
Q 047576 504 SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVI 582 (602)
Q Consensus 504 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 582 (602)
.......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||..... ......+... ........
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~-------~~~~~~~~~~-~~~~~~~~-- 231 (269)
T 4hcu_A 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-------SEVVEDISTG-FRLYKPRL-- 231 (269)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTT-CCCCCCTT--
T ss_pred ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH-------HHHHHHHhcC-ccCCCCCc--
Confidence 11222456788999999998999999999999999999999 9999975321 1112222222 11111111
Q ss_pred HHHHHHHHHHhhccCcCCCC
Q 047576 583 QDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 583 ~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++..||+.||++
T Consensus 232 -~~~~~~~li~~~l~~~p~~ 250 (269)
T 4hcu_A 232 -ASTHVYQIMNHCWRERPED 250 (269)
T ss_dssp -SCHHHHHHHHHHTCSSGGG
T ss_pred -CCHHHHHHHHHHccCCccc
Confidence 2234788999999999974
No 99
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.97 E-value=5.6e-32 Score=293.57 Aligned_cols=221 Identities=18% Similarity=0.258 Sum_probs=163.3
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhc-------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER------------------- 427 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~------------------- 427 (602)
.++|...+.||+|+||.||+|+. .+++.||||++..... ...+.+|++++..+.+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 46799999999999999999985 5789999998764432 2456778877755443
Q ss_pred ------CccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeee---CCCCcceeeccccccc
Q 047576 428 ------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILL---NSKLEAFVADFGTARL 498 (602)
Q Consensus 428 ------gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILl---d~~~~~kL~DFG~a~~ 498 (602)
++|.+++... ...+++.+++.|+.||+.||+||| +++|+||||||+|||+ +.++.+||+|||+++.
T Consensus 81 vme~~g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (483)
T 3sv0_A 81 VMDLLGPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155 (483)
T ss_dssp EEECCCCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEECCCCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence 4444444321 335899999999999999999999 7899999999999999 6889999999999987
Q ss_pred ccCCCCC-------ccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhcc
Q 047576 499 LHADSSN-------QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ 571 (602)
Q Consensus 499 ~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~ 571 (602)
....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+..+.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~----~~~~~~~~i~~~ 231 (483)
T 3sv0_A 156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG----TKKQKYEKISEK 231 (483)
T ss_dssp CBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS----SHHHHHHHHHHH
T ss_pred ccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccch----hHHHHHHHHhhc
Confidence 6543321 22457999999999999999999999999999999999999999753221 111112222222
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 572 RLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 572 ~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.+.............++.+++..||+.||++
T Consensus 232 ~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~ 262 (483)
T 3sv0_A 232 KVATSIEALCRGYPTEFASYFHYCRSLRFDD 262 (483)
T ss_dssp HHHSCHHHHHTTSCHHHHHHHHHHHTCCTTC
T ss_pred cccccHHHHhcCCcHHHHHHHHHHhcCChhh
Confidence 2211111000112345889999999999975
No 100
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.97 E-value=1.7e-31 Score=278.68 Aligned_cols=217 Identities=23% Similarity=0.330 Sum_probs=166.8
Q ss_pred ccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc----------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND---------- 437 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~---------- 437 (602)
..|...+.||+|+||.||+|+. .+|+.||||++...........+.+.+|+.++..+.|+++..++...
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588889999999999999985 57999999998755433344557788999999888888877655321
Q ss_pred ------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCC
Q 047576 438 ------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 505 (602)
Q Consensus 438 ------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~ 505 (602)
.....+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 134 e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--- 207 (348)
T 1u5q_A 134 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 207 (348)
T ss_dssp ECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---
T ss_pred ecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC---
Confidence 01234789999999999999999999 789999999999999999999999999999865432
Q ss_pred ccccccccccccccccc---cCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhH
Q 047576 506 QTLLAGSYGYIAPELAY---TMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVI 582 (602)
Q Consensus 506 ~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 582 (602)
....||+.|+|||++. +..++.++|||||||++|||++|+.||...... ..+..+.....+......
T Consensus 208 -~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~-- 277 (348)
T 1u5q_A 208 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-------SALYHIAQNESPALQSGH-- 277 (348)
T ss_dssp -CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHSCCCCCCCTT--
T ss_pred -CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHHhcCCCCCCCCC--
Confidence 2357999999999884 567899999999999999999999999753221 112222222222111111
Q ss_pred HHHHHHHHHHhhccCcCCCC
Q 047576 583 QDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 583 ~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++..||+.||++
T Consensus 278 -~~~~l~~li~~~l~~dP~~ 296 (348)
T 1u5q_A 278 -WSEYFRNFVDSCLQKIPQD 296 (348)
T ss_dssp -SCHHHHHHHHHHTCSSGGG
T ss_pred -CCHHHHHHHHHHcccChhh
Confidence 2234778999999999974
No 101
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.2e-31 Score=278.80 Aligned_cols=220 Identities=20% Similarity=0.308 Sum_probs=161.7
Q ss_pred CccccCcccccccccccceeeec------CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh-hcCc-----------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL------PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM-ERGS----------- 429 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l-~~gs----------- 429 (602)
.++|...+.||+|+||.||+|+. .++..||||++...... ...+.+.+|+.++..+ .|++
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADS--SEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCH--HHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 46788999999999999999985 35678999999754322 2346788898888555 4444
Q ss_pred --------------cccccccccc--------------------hhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCC
Q 047576 430 --------------LFRILHNDAE--------------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDI 475 (602)
Q Consensus 430 --------------L~~~l~~~~~--------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DL 475 (602)
|.+++..... ...+++.++..++.|++.||+||| +.+|+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCC
Confidence 4444432211 123789999999999999999999 789999999
Q ss_pred CCCCeeeCCCCcceeecccccccccCCCCC--ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 047576 476 SSNNILLNSKLEAFVADFGTARLLHADSSN--QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLH 552 (602)
Q Consensus 476 kp~NILld~~~~~kL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~ 552 (602)
||+||+++.++.+||+|||++......... .....||+.|+|||++.+..++.++||||||+++|||+| |+.||...
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 999999999999999999999876543322 223457889999999999999999999999999999998 99999753
Q ss_pred cccccCCCcccchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 553 STLSSSYDPKIMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 553 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.. ...+...+......+.... ....+.+++..||+.||++
T Consensus 279 ~~-------~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~ 318 (344)
T 1rjb_A 279 PV-------DANFYKLIQNGFKMDQPFY---ATEEIYIIMQSCWAFDSRK 318 (344)
T ss_dssp CC-------SHHHHHHHHTTCCCCCCTT---CCHHHHHHHHHHTCSSGGG
T ss_pred Cc-------HHHHHHHHhcCCCCCCCCC---CCHHHHHHHHHHcCCCchh
Confidence 21 1122333333322222211 2344888999999999974
No 102
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.97 E-value=1.9e-31 Score=270.91 Aligned_cols=178 Identities=23% Similarity=0.321 Sum_probs=148.4
Q ss_pred ccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc---------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA--------- 438 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~--------- 438 (602)
++|...+.||+|+||+||+|+.. +++.||+|++...... ....+.+.+|+.++..+.|+++..++....
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSS-TTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCc-CCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 46888999999999999999864 6899999998754332 123456788999999988888777654210
Q ss_pred -------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCC
Q 047576 439 -------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 505 (602)
Q Consensus 439 -------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~ 505 (602)
....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.........
T Consensus 81 e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (292)
T 3o0g_A 81 EFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp ECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred ecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence 1235889999999999999999999 789999999999999999999999999999877654444
Q ss_pred ccccccccccccccccccCc-CCccchhHHHHHHHHHHHcCCCCCC
Q 047576 506 QTLLAGSYGYIAPELAYTMV-MTEKYDVYSFGVVTLEVLMGKHPRD 550 (602)
Q Consensus 506 ~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~elltG~~Pf~ 550 (602)
.....||+.|+|||++.+.. ++.++||||+||++|||+||..||.
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~ 203 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 203 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSC
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCc
Confidence 45567899999999998766 7999999999999999999998863
No 103
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.97 E-value=1.7e-31 Score=275.71 Aligned_cols=216 Identities=22% Similarity=0.382 Sum_probs=161.9
Q ss_pred ccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccc-----------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHN----------- 436 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~----------- 436 (602)
++|+..+.||+|+||.||+|+.. +|+.||||++...... ...+.+.+|+.++..+.|+++..++..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRE--LAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTT--THHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 57888999999999999999875 7999999998654322 234678889999988888877765431
Q ss_pred -----------------------------------------------------------------------ccchhhhcH
Q 047576 437 -----------------------------------------------------------------------DAEAVELDW 445 (602)
Q Consensus 437 -----------------------------------------------------------------------~~~~~~l~~ 445 (602)
.......++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 111123456
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC------------Ccccccccc
Q 047576 446 AKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS------------NQTLLAGSY 513 (602)
Q Consensus 446 ~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~------------~~~~~~gt~ 513 (602)
..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....... ......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 678899999999999999 78999999999999999999999999999987754321 122346999
Q ss_pred ccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHHHHHHHHHHHh
Q 047576 514 GYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQDILLVSTISF 593 (602)
Q Consensus 514 ~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~ 593 (602)
.|+|||++.+..++.++||||+|+++|||++|..|+... ......+.....+ .........+.+++.
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~---------~~~~~~~~~~~~~----~~~~~~~~~~~~li~ 307 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER---------VRIITDVRNLKFP----LLFTQKYPQEHMMVQ 307 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH---------HHHHHHHHTTCCC----HHHHHHCHHHHHHHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH---------HHHHHHhhccCCC----cccccCChhHHHHHH
Confidence 999999999999999999999999999999998875321 1111122222221 222334455789999
Q ss_pred hccCcCCCC
Q 047576 594 ACLQSNPKS 602 (602)
Q Consensus 594 ~Cl~~dP~e 602 (602)
.||+.||++
T Consensus 308 ~~l~~~p~~ 316 (332)
T 3qd2_B 308 DMLSPSPTE 316 (332)
T ss_dssp HHHCSSGGG
T ss_pred HHccCCCCc
Confidence 999999974
No 104
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.97 E-value=1.9e-31 Score=280.86 Aligned_cols=216 Identities=19% Similarity=0.251 Sum_probs=157.5
Q ss_pred cCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc-------------
Q 047576 372 DSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND------------- 437 (602)
Q Consensus 372 ~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~------------- 437 (602)
...+.||+|+||.||+|+. .+|+.||+|+++..... ..+.+.+|+.++..+.|+++..++...
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 168 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK---DKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV 168 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHH---HHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccc---cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence 3456899999999999986 47899999998765433 346788999999666665555443210
Q ss_pred ----------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeee--CCCCcceeecccccccccCCCCC
Q 047576 438 ----------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILL--NSKLEAFVADFGTARLLHADSSN 505 (602)
Q Consensus 438 ----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILl--d~~~~~kL~DFG~a~~~~~~~~~ 505 (602)
.....+++.++..++.||+.||+||| +.+|+||||||+||++ +.++.+||+|||+++.......
T Consensus 169 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~- 244 (373)
T 2x4f_A 169 DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK- 244 (373)
T ss_dssp TTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB-
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc-
Confidence 01234889999999999999999999 7899999999999999 6678999999999987654322
Q ss_pred ccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHHHH
Q 047576 506 QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQDI 585 (602)
Q Consensus 506 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 585 (602)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...+..++......+.. ......
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-------~~~~~~i~~~~~~~~~~-~~~~~~ 316 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND-------AETLNNILACRWDLEDE-EFQDIS 316 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHHTCCCSCSG-GGTTSC
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhccCCCChh-hhccCC
Confidence 2335699999999999988999999999999999999999999975321 22233444433322111 001123
Q ss_pred HHHHHHHhhccCcCCCC
Q 047576 586 LLVSTISFACLQSNPKS 602 (602)
Q Consensus 586 ~~l~~l~~~Cl~~dP~e 602 (602)
..+.+++.+|++.||++
T Consensus 317 ~~~~~li~~~L~~dp~~ 333 (373)
T 2x4f_A 317 EEAKEFISKLLIKEKSW 333 (373)
T ss_dssp HHHHHHHHTTSCSSGGG
T ss_pred HHHHHHHHHHcCCChhh
Confidence 45889999999999974
No 105
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.97 E-value=2.7e-32 Score=286.42 Aligned_cols=224 Identities=15% Similarity=0.199 Sum_probs=158.4
Q ss_pred CccccCcccccccccccceeeecCC------CcEEeeeccCCchhHHH---HHhh-----hhHhHHHHHHhhhcCccc--
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPN------GRVFALKKLNSPETEEL---AFIR-----SFRNEAQVLSQMERGSLF-- 431 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~~---~~~~-----~~~~E~~il~~l~~gsL~-- 431 (602)
.++|...+.||+|+||.||+|+... ++.||||++........ ...+ .+..|+..+..+.|.++.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4589999999999999999998754 47899999875542211 1111 122333334334444443
Q ss_pred --------------------------cccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeC--
Q 047576 432 --------------------------RILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLN-- 483 (602)
Q Consensus 432 --------------------------~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld-- 483 (602)
+++.. ....+++.++..|+.||+.||+||| +.+|+||||||+|||++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRFGSDLQKIYEA--NAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECEEEEHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESS
T ss_pred EeeeeeccCCcceEEEEEeCCCCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecC
Confidence 33322 1245899999999999999999999 78999999999999999
Q ss_pred CCCcceeecccccccccCCCCC-------ccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccc
Q 047576 484 SKLEAFVADFGTARLLHADSSN-------QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLS 556 (602)
Q Consensus 484 ~~~~~kL~DFG~a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~ 556 (602)
.++.+||+|||+++........ .....||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 8899999999999876432211 123459999999999999999999999999999999999999997422110
Q ss_pred cCC-----CcccchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 557 SSY-----DPKIMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 557 ~~~-----~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
... .....+.+++++.++... ....+.+++..||+.||++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~li~~cl~~~p~~ 313 (364)
T 3op5_A 269 KYVRDSKIRYRENIASLMDKCFPAAN------APGEIAKYMETVKLLDYTE 313 (364)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHSCTTC------CCHHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHhhhhHHHHHHHhccccc------CHHHHHHHHHHHhcCCCCC
Confidence 000 001223444555443221 1234788999999999975
No 106
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.4e-31 Score=281.39 Aligned_cols=219 Identities=25% Similarity=0.345 Sum_probs=160.2
Q ss_pred CccccCcccccccccccceeeec------CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL------PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFR--------- 432 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~--------- 432 (602)
.++|...+.||+|+||.||+|+. .+++.||||+++..... .....+.+|+.++..+.|+++..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLMEALIISKFNHQNIVRCIGVSLQSL 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCH--HHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccCh--hhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 46788999999999999999984 25778999999754332 23456778998886655555544
Q ss_pred ----------------cccccc----chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCC---cce
Q 047576 433 ----------------ILHNDA----EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKL---EAF 489 (602)
Q Consensus 433 ----------------~l~~~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~---~~k 489 (602)
++.... ....+++.++..++.||+.||+||| +++|+||||||+|||++.++ .+|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEE
Confidence 333211 1134888999999999999999999 78999999999999999554 599
Q ss_pred eecccccccccCCC--CCccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchh
Q 047576 490 VADFGTARLLHADS--SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLI 566 (602)
Q Consensus 490 L~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~ 566 (602)
|+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||+| |+.||..... .. +.
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~-------~~-~~ 296 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-------QE-VL 296 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------HH-HH
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-------HH-HH
Confidence 99999998653321 22233567899999999999999999999999999999998 9999975321 11 12
Q ss_pred hhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 567 DVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 567 ~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
+.+......+.... ....+.+++..||+.||++
T Consensus 297 ~~i~~~~~~~~~~~---~~~~l~~li~~~l~~dP~~ 329 (367)
T 3l9p_A 297 EFVTSGGRMDPPKN---CPGPVYRIMTQCWQHQPED 329 (367)
T ss_dssp HHHHTTCCCCCCTT---CCHHHHHHHHHHTCSSGGG
T ss_pred HHHHcCCCCCCCcc---CCHHHHHHHHHHcCCCHhH
Confidence 22222111111111 2334889999999999974
No 107
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.97 E-value=2.5e-31 Score=272.39 Aligned_cols=217 Identities=25% Similarity=0.381 Sum_probs=153.7
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccc----------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLF---------------- 431 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~---------------- 431 (602)
.++|...+.||+|+||.||+|+. .++.||+|++..... .+.+.+|+.++..+.|+++.
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~ 80 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESE-----RKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEY 80 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSSTTH-----HHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEEC
T ss_pred HhHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecChhH-----HHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEc
Confidence 45788899999999999999987 478899999975432 35678888888555555444
Q ss_pred -------cccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCc-ceeecccccccccCCC
Q 047576 432 -------RILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLE-AFVADFGTARLLHADS 503 (602)
Q Consensus 432 -------~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~-~kL~DFG~a~~~~~~~ 503 (602)
+++........+++..+..++.|+++||+|||+.+.++|+||||||+||+++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~- 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH- 159 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-
Confidence 44433222223678899999999999999999433389999999999999988876 799999999765432
Q ss_pred CCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHH
Q 047576 504 SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQ 583 (602)
Q Consensus 504 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 583 (602)
.....||+.|+|||++.+..++.++||||||+++|||+||+.||+..... .......+... ..++....
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~~~-~~~~~~~~--- 228 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP-----AFRIMWAVHNG-TRPPLIKN--- 228 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS-----HHHHHHHHHTT-CCCCCBTT---
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc-----HHHHHHHHhcC-CCCCcccc---
Confidence 22346899999999999999999999999999999999999999743211 00011111111 11111111
Q ss_pred HHHHHHHHHhhccCcCCCC
Q 047576 584 DILLVSTISFACLQSNPKS 602 (602)
Q Consensus 584 ~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+||+.||++
T Consensus 229 ~~~~l~~li~~~l~~dp~~ 247 (307)
T 2eva_A 229 LPKPIESLMTRCWSKDPSQ 247 (307)
T ss_dssp CCHHHHHHHHHHTCSSGGG
T ss_pred cCHHHHHHHHHHhcCChhh
Confidence 2234788999999999974
No 108
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.97 E-value=1.4e-31 Score=270.44 Aligned_cols=215 Identities=22% Similarity=0.325 Sum_probs=159.7
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccc---------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFR--------------- 432 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~--------------- 432 (602)
.++|...+.||+|+||.||+|+..+++.||+|++...... .+.+.+|++++..+.|.++..
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS----EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT 98 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC----HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEE
Confidence 5678899999999999999999988889999999765433 245778998886555555443
Q ss_pred ----------ccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCC
Q 047576 433 ----------ILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD 502 (602)
Q Consensus 433 ----------~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~ 502 (602)
++.. ....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 99 e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 99 EYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp CCCTTCBHHHHHHC--GGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred eccCCCcHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 3332 1245899999999999999999999 789999999999999999999999999999866432
Q ss_pred CC-CccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCChh
Q 047576 503 SS-NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRK 580 (602)
Q Consensus 503 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 580 (602)
.. ......+++.|+|||++.+..++.++||||+|+++|+|+| |+.||..... ......+.+ .........
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~-------~~~~~~~~~-~~~~~~~~~ 245 (283)
T 3gen_A 174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN-------SETAEHIAQ-GLRLYRPHL 245 (283)
T ss_dssp HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH-------HHHHHHHHT-TCCCCCCTT
T ss_pred ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh-------hHHHHHHhc-ccCCCCCCc
Confidence 11 1122346788999999998899999999999999999999 9999975321 111122222 111111111
Q ss_pred hHHHHHHHHHHHhhccCcCCCC
Q 047576 581 VIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 581 ~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++..||+.||++
T Consensus 246 ---~~~~l~~li~~~l~~~p~~ 264 (283)
T 3gen_A 246 ---ASEKVYTIMYSCWHEKADE 264 (283)
T ss_dssp ---CCHHHHHHHHHTTCSSGGG
T ss_pred ---CCHHHHHHHHHHccCChhH
Confidence 1234789999999999974
No 109
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.97 E-value=1.1e-31 Score=278.92 Aligned_cols=219 Identities=24% Similarity=0.362 Sum_probs=163.3
Q ss_pred CccccCcccccccccccceeeecC------CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcC-------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP------NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERG------------- 428 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~g------------- 428 (602)
.++|...+.||+|+||.||+|+.. +++.||||+++..... ...+.+.+|+.++..+.|+
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASA--DMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCH--HHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCH--HHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 467889999999999999999863 4589999999765432 2456788999988555544
Q ss_pred ------------ccccccccccc---------------------hhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCC
Q 047576 429 ------------SLFRILHNDAE---------------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDI 475 (602)
Q Consensus 429 ------------sL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DL 475 (602)
+|.+++..... ...+++.++..++.||++||+||| +.+|+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCC
Confidence 44444432110 145889999999999999999999 789999999
Q ss_pred CCCCeeeCCCCcceeecccccccccCCC--CCccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 047576 476 SSNNILLNSKLEAFVADFGTARLLHADS--SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLH 552 (602)
Q Consensus 476 kp~NILld~~~~~kL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~ 552 (602)
||+||+++.++.+||+|||+++...... .......+++.|+|||++.+..++.++||||||+++|||+| |+.||...
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 9999999999999999999998664322 12233467889999999999899999999999999999999 99999743
Q ss_pred cccccCCCcccchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 553 STLSSSYDPKIMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 553 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.. ......+.+...... ... ....+.+++..||+.||++
T Consensus 281 ~~-------~~~~~~~~~~~~~~~-~~~---~~~~l~~li~~~l~~~p~~ 319 (343)
T 1luf_A 281 AH-------EEVIYYVRDGNILAC-PEN---CPLELYNLMRLCWSKLPAD 319 (343)
T ss_dssp CH-------HHHHHHHHTTCCCCC-CTT---CCHHHHHHHHHHTCSSGGG
T ss_pred Ch-------HHHHHHHhCCCcCCC-CCC---CCHHHHHHHHHHcccCccc
Confidence 21 122223333322211 111 2234889999999999974
No 110
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.97 E-value=2.2e-31 Score=270.59 Aligned_cols=220 Identities=21% Similarity=0.301 Sum_probs=170.1
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|...+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+.++..+.|.++..++...
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467999999999999999999875 5889999998655433334456788899999777777766554321
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS 504 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~ 504 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+........
T Consensus 94 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 94 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp EECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 01234789999999999999999999 78999999999999999999999999999987754444
Q ss_pred CccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHHH
Q 047576 505 NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQD 584 (602)
Q Consensus 505 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 584 (602)
......|++.|+|||++.+..++.++||||+|+++|+|++|+.||..... ......+.......+. . .
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~--~---~ 238 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-------KETYLRIKKNEYSIPK--H---I 238 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHTTCCCCCT--T---S
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHhhccCCCcc--c---c
Confidence 44456799999999999998899999999999999999999999975321 1112222222222111 1 1
Q ss_pred HHHHHHHHhhccCcCCCC
Q 047576 585 ILLVSTISFACLQSNPKS 602 (602)
Q Consensus 585 ~~~l~~l~~~Cl~~dP~e 602 (602)
...+.+++..|++.||++
T Consensus 239 ~~~~~~li~~~l~~~p~~ 256 (294)
T 2rku_A 239 NPVAASLIQKMLQTDPTA 256 (294)
T ss_dssp CHHHHHHHHHHTCSSGGG
T ss_pred CHHHHHHHHHHcccChhh
Confidence 234778999999999974
No 111
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.97 E-value=1.1e-31 Score=277.54 Aligned_cols=223 Identities=21% Similarity=0.269 Sum_probs=164.2
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHH---HHhhhhHhHHHHHHhhhcCccccccccc------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEEL---AFIRSFRNEAQVLSQMERGSLFRILHND------ 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~---~~~~~~~~E~~il~~l~~gsL~~~l~~~------ 437 (602)
.+.|...+.||+|+||.||+|+.. +|+.||+|++........ ...+.+.+|+.++..+.|+++..++...
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 457889999999999999999864 689999998865432110 1235678899988666665554443210
Q ss_pred ----------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCC----cceeecccccc
Q 047576 438 ----------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKL----EAFVADFGTAR 497 (602)
Q Consensus 438 ----------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~----~~kL~DFG~a~ 497 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||++.
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 01234889999999999999999999 78999999999999999887 79999999998
Q ss_pred cccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCC
Q 047576 498 LLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPV 577 (602)
Q Consensus 498 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 577 (602)
....... .....||+.|+|||++.+..++.++||||+||++|+|++|+.||..... ...+..+.......+.
T Consensus 167 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~~~~~~~~~~~ 238 (326)
T 2y0a_A 167 KIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-------QETLANVSAVNYEFED 238 (326)
T ss_dssp ECCTTSC-CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHHHHHHHHTCCCCCH
T ss_pred ECCCCCc-cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH-------HHHHHHHHhcCCCcCc
Confidence 7654322 2335799999999999988999999999999999999999999974321 1112222222221110
Q ss_pred ChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 578 DRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 578 ~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.........+.+++.+|++.||++
T Consensus 239 -~~~~~~~~~~~~li~~~L~~dP~~ 262 (326)
T 2y0a_A 239 -EYFSNTSALAKDFIRRLLVKDPKK 262 (326)
T ss_dssp -HHHTTSCHHHHHHHHHHSCSSGGG
T ss_pred -cccccCCHHHHHHHHHHccCChhh
Confidence 000112244789999999999974
No 112
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.97 E-value=1.3e-31 Score=274.38 Aligned_cols=181 Identities=27% Similarity=0.368 Sum_probs=143.0
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhH--HHHHhhhhHhHHHHHHhhh---cCccccccccc----
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETE--ELAFIRSFRNEAQVLSQME---RGSLFRILHND---- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~~~~~E~~il~~l~---~gsL~~~l~~~---- 437 (602)
.++|.....||+|+||.||+|+. .+++.||||++...... .......+.+|+.+++.+. |+++..++...
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 56899999999999999999986 47899999998633211 0111234556777665554 76665544311
Q ss_pred ------------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecc
Q 047576 438 ------------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADF 493 (602)
Q Consensus 438 ------------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DF 493 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 88 ~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Df 164 (308)
T 3g33_A 88 TDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADF 164 (308)
T ss_dssp SSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEECSC
T ss_pred CCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEeeC
Confidence 01122889999999999999999999 789999999999999999999999999
Q ss_pred cccccccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 494 GTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 494 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
|+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 165 g~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 222 (308)
T 3g33_A 165 GLARIYSYQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 222 (308)
T ss_dssp SCTTTSTTCC-CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCS
T ss_pred ccccccCCCc-ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9998765433 234467899999999999999999999999999999999999999754
No 113
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=3.1e-31 Score=274.53 Aligned_cols=218 Identities=24% Similarity=0.386 Sum_probs=154.0
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHH-------------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVL------------------------- 422 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il------------------------- 422 (602)
.++|...+.||+|+||.||+|+.. ++.||||++...... .+..|.+++
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~------~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 36 AKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEA------SWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGHH------HHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred ccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccccc------hhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 467999999999999999999885 899999998644322 222333333
Q ss_pred ------HhhhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCC--------CeEEeCCCCCCeeeCCCCcc
Q 047576 423 ------SQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSP--------SVVHRDISSNNILLNSKLEA 488 (602)
Q Consensus 423 ------~~l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~--------~ivH~DLkp~NILld~~~~~ 488 (602)
||+++|+|.++++. ..+++.++..++.|++.||+||| +. +|+||||||+||+++.++.+
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred ceEEEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 44455555555532 24889999999999999999999 66 99999999999999999999
Q ss_pred eeecccccccccCCCCC----ccccccccccccccccccCcCCcc------chhHHHHHHHHHHHcC----------CCC
Q 047576 489 FVADFGTARLLHADSSN----QTLLAGSYGYIAPELAYTMVMTEK------YDVYSFGVVTLEVLMG----------KHP 548 (602)
Q Consensus 489 kL~DFG~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~------~DvwSlGvil~elltG----------~~P 548 (602)
||+|||++......... .....||+.|+|||++.+...+.+ +|||||||++|||+|| +.|
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 99999999766443221 123579999999999987766654 9999999999999999 445
Q ss_pred CCCCcccccCCCcccchhhhh-ccCCCCCCCh--hhHHHHHHHHHHHhhccCcCCCC
Q 047576 549 RDLHSTLSSSYDPKIMLIDVL-DQRLPPPVDR--KVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 549 f~~~~~~~~~~~~~~~~~~~~-d~~l~~~~~~--~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
|....... .......+.+ .....+.... ...+....+.+++..||+.||++
T Consensus 262 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~ 315 (337)
T 3mdy_A 262 YHDLVPSD---PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPAS 315 (337)
T ss_dssp TTTTSCSS---CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGG
T ss_pred HhhhcCCC---CchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhh
Confidence 44221110 1111111211 1222222211 11246677999999999999974
No 114
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.97 E-value=2.4e-31 Score=268.23 Aligned_cols=218 Identities=26% Similarity=0.380 Sum_probs=164.1
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|.....||+|+||.||+|+.. +++.||+|++.............+.+|+.++..+.|+++..++...
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 578999999999999999999764 6779999998665544444456788899999777777766554321
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS 504 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~ 504 (602)
.....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~- 163 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 163 (279)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCccc-
Confidence 01234788999999999999999999 8899999999999999999999999999986554322
Q ss_pred CccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHHH
Q 047576 505 NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQD 584 (602)
Q Consensus 505 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 584 (602)
.....|++.|+|||++.+..++.++||||+|+++|+|++|+.||..... ......+.......+. . .
T Consensus 164 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~--~---~ 230 (279)
T 3fdn_A 164 -RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-------QETYKRISRVEFTFPD--F---V 230 (279)
T ss_dssp -----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHHTCCCCCT--T---S
T ss_pred -ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH-------HHHHHHHHhCCCCCCC--c---C
Confidence 2345789999999999999999999999999999999999999974321 1112222222222111 1 1
Q ss_pred HHHHHHHHhhccCcCCCC
Q 047576 585 ILLVSTISFACLQSNPKS 602 (602)
Q Consensus 585 ~~~l~~l~~~Cl~~dP~e 602 (602)
...+.+++.+|++.||++
T Consensus 231 ~~~~~~li~~~l~~~p~~ 248 (279)
T 3fdn_A 231 TEGARDLISRLLKHNPSQ 248 (279)
T ss_dssp CHHHHHHHHHHCCSSGGG
T ss_pred CHHHHHHHHHHhccChhh
Confidence 233778999999999974
No 115
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.97 E-value=2.3e-31 Score=281.34 Aligned_cols=218 Identities=23% Similarity=0.285 Sum_probs=163.0
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCc-----------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGS----------------- 429 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gs----------------- 429 (602)
.+.|...+.||+|+||.||+|+.. +|+.||+|++...... ....+.+|+.++..+.|++
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~---~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL---DKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH---HHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchh---hHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 467899999999999999999864 6899999998765432 2346788999885555544
Q ss_pred --------cccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCC--CCcceeecccccccc
Q 047576 430 --------LFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS--KLEAFVADFGTARLL 499 (602)
Q Consensus 430 --------L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~--~~~~kL~DFG~a~~~ 499 (602)
|.+++.. ....+++.++..++.||+.||+||| +.+|+||||||+||+++. ++.+||+|||++...
T Consensus 127 ~E~~~gg~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 127 LEFLSGGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp EECCCCCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceec
Confidence 4444432 1235899999999999999999999 789999999999999974 478999999999876
Q ss_pred cCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCCh
Q 047576 500 HADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDR 579 (602)
Q Consensus 500 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 579 (602)
.... ......||+.|+|||++.+..++.++||||+||++|||+||+.||..... ...+..+.......+...
T Consensus 202 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-------~~~~~~i~~~~~~~~~~~ 273 (387)
T 1kob_A 202 NPDE-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-------LETLQNVKRCDWEFDEDA 273 (387)
T ss_dssp CTTS-CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHHHHHHHHCCCCCCSST
T ss_pred CCCc-ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCCCCccc
Confidence 5433 23345799999999999999999999999999999999999999975322 111222222211111000
Q ss_pred hhHHHHHHHHHHHhhccCcCCCC
Q 047576 580 KVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 580 ~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.......+.+++..||+.||++
T Consensus 274 -~~~~s~~~~~li~~~L~~dP~~ 295 (387)
T 1kob_A 274 -FSSVSPEAKDFIKNLLQKEPRK 295 (387)
T ss_dssp -TTTSCHHHHHHHHTTSCSSGGG
T ss_pred -cccCCHHHHHHHHHHcCCChhH
Confidence 0012234789999999999974
No 116
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.97 E-value=1.4e-31 Score=276.44 Aligned_cols=217 Identities=20% Similarity=0.280 Sum_probs=157.1
Q ss_pred CccccCcccccccccccceeeecC-CCcE----EeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccc-----------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRV----FALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLF----------- 431 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~----vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~----------- 431 (602)
.++|.....||+|+||.||+|+.. +++. ||+|.+...... ...+.+.+|+.++..+.|+++.
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 89 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSL 89 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC--SCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH--HHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcc
Confidence 467899999999999999999853 4444 777876543221 2345677788877555554444
Q ss_pred -------------cccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccc
Q 047576 432 -------------RILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARL 498 (602)
Q Consensus 432 -------------~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~ 498 (602)
+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 90 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEEEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccc
Confidence 444321 345889999999999999999999 78999999999999999999999999999988
Q ss_pred ccCCCC--CccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCC
Q 047576 499 LHADSS--NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPP 575 (602)
Q Consensus 499 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~ 575 (602)
...... ......|+..|+|||++.+..++.++||||||+++|||+| |+.||..... ....+.+......
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~~ 236 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL--------AEVPDLLEKGERL 236 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT--------THHHHHHHTTCBC
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH--------HHHHHHHHcCCCC
Confidence 754322 2234567889999999999999999999999999999999 9999975321 1112222221111
Q ss_pred CCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 576 PVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 576 ~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
..... ....+.+++.+||+.||++
T Consensus 237 ~~~~~---~~~~~~~li~~~l~~dp~~ 260 (325)
T 3kex_A 237 AQPQI---CTIDVYMVMVKCWMIDENI 260 (325)
T ss_dssp CCCTT---BCTTTTHHHHHHTCSCTTT
T ss_pred CCCCc---CcHHHHHHHHHHcCCChhh
Confidence 11111 1223778999999999975
No 117
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.97 E-value=2.2e-31 Score=281.37 Aligned_cols=219 Identities=24% Similarity=0.319 Sum_probs=162.6
Q ss_pred CccccCcccccccccccceeeec--------CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh-hc-----------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL--------PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM-ER----------- 427 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~--------~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l-~~----------- 427 (602)
.++|...+.||+|+||.||+|+. .++..||||+++..... ...+.+.+|++++..+ .|
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCH--HHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 46788999999999999999974 23468999999765432 2346778888888555 44
Q ss_pred --------------Cccccccccccc-------------hhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCe
Q 047576 428 --------------GSLFRILHNDAE-------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480 (602)
Q Consensus 428 --------------gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NI 480 (602)
|+|.+++..... ...+++.++..|+.|++.||+||| +.+|+||||||+||
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NI 222 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNV 222 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGE
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceE
Confidence 444444433211 134899999999999999999999 78999999999999
Q ss_pred eeCCCCcceeecccccccccCCCC--CccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCccccc
Q 047576 481 LLNSKLEAFVADFGTARLLHADSS--NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSS 557 (602)
Q Consensus 481 Lld~~~~~kL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~ 557 (602)
+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~--- 299 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--- 299 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH---
Confidence 999999999999999987654321 2233457889999999999999999999999999999999 9999974321
Q ss_pred CCCcccchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 558 SYDPKIMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 558 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
. .+.+.+........... ....+.+++..||+.||++
T Consensus 300 ----~-~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dP~~ 336 (382)
T 3tt0_A 300 ----E-ELFKLLKEGHRMDKPSN---CTNELYMMMRDCWHAVPSQ 336 (382)
T ss_dssp ----H-HHHHHHHTTCCCCCCSS---CCHHHHHHHHHHTCSSGGG
T ss_pred ----H-HHHHHHHcCCCCCCCcc---CCHHHHHHHHHHcCCChhh
Confidence 1 11222222211111111 2334888999999999974
No 118
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=1.9e-29 Score=261.24 Aligned_cols=255 Identities=24% Similarity=0.325 Sum_probs=201.3
Q ss_pred CCCCCCCceeCCC----------CCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCC
Q 047576 89 DHCEWIGITCNSA----------GSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQ 158 (602)
Q Consensus 89 ~~C~w~gv~C~~~----------~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~ 158 (602)
+.|.|..+.|... .+++.|+++...+. .+..-.|+.+++|+.|++. .+.+.+..|..|+++++|+
T Consensus 31 c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~---~~~~~~~~~l~~L~~L~L~--~n~l~~~~~~~~~~l~~L~ 105 (332)
T 2ft3_A 31 CHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDIS---ELRKDDFKGLQHLYALVLV--NNKISKIHEKAFSPLRKLQ 105 (332)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCC---EECTTTTTTCTTCCEEECC--SSCCCEECGGGSTTCTTCC
T ss_pred CcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCC---ccCHhHhhCCCCCcEEECC--CCccCccCHhHhhCcCCCC
Confidence 3478999999632 24566777554332 3333356777777777776 5666666688888888999
Q ss_pred EEECcCCcCcc----cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCC--CCCcccccCcCCCceeecccccC
Q 047576 159 LLDLSSNRLRG----RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLI--GPIPLTLSRLTSLKILILAQNQL 232 (602)
Q Consensus 159 ~L~Ls~N~i~~----~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~L~~N~l 232 (602)
+|+|++|++.. ..++|++|++++|++++..+..|.++++|++|++++|.++ +..|..+..+ +|++|++++|++
T Consensus 106 ~L~L~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 106 KLYISKNHLVEIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKL 184 (332)
T ss_dssp EEECCSSCCCSCCSSCCTTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBC
T ss_pred EEECCCCcCCccCccccccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCC
Confidence 99998888873 2468889999999888877778888888999999988885 4677778777 888899999988
Q ss_pred CCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccC
Q 047576 233 SGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIA 312 (602)
Q Consensus 233 ~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 312 (602)
+++|..+. ++|++|++++|.+++..|..+..+++|++|++++|++++..+..+..+++|+.|+|++|+++ .+|..+.
T Consensus 185 ~~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 261 (332)
T 2ft3_A 185 TGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLP 261 (332)
T ss_dssp SSCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGG
T ss_pred CccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhh
Confidence 88887665 68888889999888888888888888999999999888887778888888999999998888 6788888
Q ss_pred CCCCCCEEeCCCCCCCCCCCcccccc------cccccccccCCcCC
Q 047576 313 SMEDLTWLDLSNNNIKGSIPGEITKL------SRLDYLNLSGNKLS 352 (602)
Q Consensus 313 ~l~~L~~L~L~~N~l~~~~p~~~~~l------~~L~~L~l~~N~l~ 352 (602)
.+++|+.|++++|++++..+..+... +.|+.|++++|++.
T Consensus 262 ~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 262 DLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp GCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSC
T ss_pred cCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccc
Confidence 88889999999888887766666543 56788888888886
No 119
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.97 E-value=3.1e-31 Score=278.06 Aligned_cols=222 Identities=19% Similarity=0.238 Sum_probs=155.4
Q ss_pred CCccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc--------
Q 047576 367 TPRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND-------- 437 (602)
Q Consensus 367 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~-------- 437 (602)
..++|...+.||+|+||.||+|+.. +++.||||++...... .+.+.+|+.++..+.|+++..++...
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 93 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----DENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 93 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS----CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc----cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEE
Confidence 3578999999999999999999875 7899999998754332 24567888888666666655443211
Q ss_pred --------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCc--ceeecccccccccC
Q 047576 438 --------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLE--AFVADFGTARLLHA 501 (602)
Q Consensus 438 --------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~--~kL~DFG~a~~~~~ 501 (602)
.....+++.++..++.|++.||+||| +++|+||||||+||+++.++. +||+|||+++....
T Consensus 94 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 94 IMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred EEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 01234889999999999999999999 789999999999999987765 99999999975432
Q ss_pred CCCCccccccccccccccccccCcCCcc-chhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChh
Q 047576 502 DSSNQTLLAGSYGYIAPELAYTMVMTEK-YDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRK 580 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 580 (602)
.. ......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||...... ......+..+.......+....
T Consensus 171 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
T 3uc3_A 171 HS-QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP---RDYRKTIQRILSVKYSIPDDIR 246 (361)
T ss_dssp -----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C---CCHHHHHHHHHTTCCCCCTTSC
T ss_pred cC-CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH---HHHHHHHHHHhcCCCCCCCcCC
Confidence 22 2233579999999999988887655 89999999999999999999753221 1112222333333333222111
Q ss_pred hHHHHHHHHHHHhhccCcCCCC
Q 047576 581 VIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 581 ~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+||+.||++
T Consensus 247 ---~s~~~~~li~~~L~~dP~~ 265 (361)
T 3uc3_A 247 ---ISPECCHLISRIFVADPAT 265 (361)
T ss_dssp ---CCHHHHHHHHHHSCSCTTT
T ss_pred ---CCHHHHHHHHHHccCChhH
Confidence 2234789999999999975
No 120
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.97 E-value=3.5e-31 Score=283.26 Aligned_cols=221 Identities=21% Similarity=0.256 Sum_probs=153.4
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchh-----HHHHHhhhhHhHHHHHHhhhcCccc----------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPET-----EELAFIRSFRNEAQVLSQMERGSLF---------- 431 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-----~~~~~~~~~~~E~~il~~l~~gsL~---------- 431 (602)
.++|...+.||+|+||.||+|.. .+++.||||++..... ........+.+|+.++..+.|+++.
T Consensus 134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 213 (419)
T 3i6u_A 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 213 (419)
T ss_dssp HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESSE
T ss_pred hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecCc
Confidence 46788999999999999999976 4689999999865432 1122345688899988655555544
Q ss_pred --------------cccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCC---cceeeccc
Q 047576 432 --------------RILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKL---EAFVADFG 494 (602)
Q Consensus 432 --------------~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~---~~kL~DFG 494 (602)
+++.. ...+++.++..++.|++.||+||| +.+|+||||||+|||++.++ .+||+|||
T Consensus 214 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp EEEEEECCTTCBGGGGTSS---SCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred eEEEEEcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeecc
Confidence 33332 234899999999999999999999 78999999999999997544 59999999
Q ss_pred ccccccCCCCCcccccccccccccccccc---CcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhcc
Q 047576 495 TARLLHADSSNQTLLAGSYGYIAPELAYT---MVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ 571 (602)
Q Consensus 495 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~ 571 (602)
+++...... ......||+.|+|||++.+ ..++.++||||+||++|+|+||+.||...... ......+...
T Consensus 288 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~------~~~~~~i~~~ 360 (419)
T 3i6u_A 288 HSKILGETS-LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ------VSLKDQITSG 360 (419)
T ss_dssp TTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS------CCHHHHHHTT
T ss_pred cceecCCCc-cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch------HHHHHHHhcC
Confidence 998765432 2334679999999999863 56788999999999999999999999743211 1111122222
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 572 RLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 572 ~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
..... .+........+.+++.+|++.||++
T Consensus 361 ~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~ 390 (419)
T 3i6u_A 361 KYNFI-PEVWAEVSEKALDLVKKLLVVDPKA 390 (419)
T ss_dssp CCCCC-HHHHTTSCHHHHHHHHHHSCSSTTT
T ss_pred CCCCC-chhhcccCHHHHHHHHHHccCChhH
Confidence 22111 1111112345889999999999975
No 121
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.97 E-value=5.2e-31 Score=275.91 Aligned_cols=175 Identities=23% Similarity=0.319 Sum_probs=142.0
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhh-----cCccccccccc----
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME-----RGSLFRILHND---- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~-----~gsL~~~l~~~---- 437 (602)
.++|...+.||+|+||.||+|+. .+++.||||++..... ..+.+..|+.+++.+. |+++..++...
T Consensus 34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~ 109 (360)
T 3llt_A 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKK----YTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD 109 (360)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHH----HHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT
T ss_pred cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchh----hhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC
Confidence 56899999999999999999986 4788999999975432 2345666888776664 54544433210
Q ss_pred -------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCC--------------
Q 047576 438 -------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS-------------- 484 (602)
Q Consensus 438 -------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~-------------- 484 (602)
.....+++.++..++.||+.||+||| +.+|+||||||+|||++.
T Consensus 110 ~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~ 186 (360)
T 3llt_A 110 HMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVT 186 (360)
T ss_dssp EEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEEEEEECTT
T ss_pred eeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccccccccchhccc
Confidence 01123788999999999999999999 789999999999999975
Q ss_pred -----------CCcceeecccccccccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 485 -----------KLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 485 -----------~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
++.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|+|+||+.||...
T Consensus 187 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 187 DGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp TCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 788999999999865432 23357899999999999999999999999999999999999999753
No 122
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.97 E-value=2.8e-31 Score=275.43 Aligned_cols=218 Identities=21% Similarity=0.325 Sum_probs=169.5
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|...+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+.++..+.|.++..++...
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467999999999999999999875 5789999998755433334456788899999777777766554311
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS 504 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~ 504 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 120 ~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 120 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp ECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred EecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 01234789999999999999999999 78999999999999999999999999999987754444
Q ss_pred CccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCC--CCCCChhhH
Q 047576 505 NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRL--PPPVDRKVI 582 (602)
Q Consensus 505 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l--~~~~~~~~~ 582 (602)
......|++.|+|||++.+..++.++||||||+++|+|++|+.||..... ......+..... +...+
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~~~~~~~---- 265 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-------KETYLRIKKNEYSIPKHIN---- 265 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHHTCCCCCTTSC----
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH-------HHHHHHHhcCCCCCCccCC----
Confidence 44456799999999999998899999999999999999999999975321 111222222222 22222
Q ss_pred HHHHHHHHHHhhccCcCCCC
Q 047576 583 QDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 583 ~~~~~l~~l~~~Cl~~dP~e 602 (602)
..+.+++.+||+.||++
T Consensus 266 ---~~~~~li~~~l~~dp~~ 282 (335)
T 2owb_A 266 ---PVAASLIQKMLQTDPTA 282 (335)
T ss_dssp ---HHHHHHHHHHTCSSGGG
T ss_pred ---HHHHHHHHHHccCChhH
Confidence 23778999999999974
No 123
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.97 E-value=2.8e-31 Score=272.14 Aligned_cols=219 Identities=21% Similarity=0.326 Sum_probs=163.1
Q ss_pred CccccCcccccccccccceeeec------CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL------PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFR--------- 432 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~--------- 432 (602)
.++|...+.||+|+||.||+|+. .+++.||+|++...... ...+.+.+|+.++..+.|+++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 99 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP--SELRDLLSEFNVLKQVNHPHVIKLYGACSQDG 99 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCH--HHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCH--HHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence 46788999999999999999974 34688999999755432 34567888999886555555444
Q ss_pred ----------------ccccccc---------------------hhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCC
Q 047576 433 ----------------ILHNDAE---------------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDI 475 (602)
Q Consensus 433 ----------------~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DL 475 (602)
++..... ...+++.++..++.|++.||+||| +.+|+||||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~di 176 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDL 176 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCC
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCccccc
Confidence 3332111 123789999999999999999999 789999999
Q ss_pred CCCCeeeCCCCcceeecccccccccCCCCC--ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 047576 476 SSNNILLNSKLEAFVADFGTARLLHADSSN--QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLH 552 (602)
Q Consensus 476 kp~NILld~~~~~kL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~ 552 (602)
||+||+++.++.+||+|||++......... .....+++.|+|||++.+..++.++||||+|+++|||+| |+.||...
T Consensus 177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999876443221 223456788999999999889999999999999999999 99999753
Q ss_pred cccccCCCcccchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 553 STLSSSYDPKIMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 553 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.. ..+.+.+......+.... ....+.+++..||+.||++
T Consensus 257 ~~--------~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~dp~~ 295 (314)
T 2ivs_A 257 PP--------ERLFNLLKTGHRMERPDN---CSEEMYRLMLQCWKQEPDK 295 (314)
T ss_dssp CG--------GGHHHHHHTTCCCCCCTT---CCHHHHHHHHHHTCSSGGG
T ss_pred CH--------HHHHHHhhcCCcCCCCcc---CCHHHHHHHHHHccCChhh
Confidence 21 111222222221111111 2334889999999999974
No 124
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.97 E-value=2.1e-31 Score=274.50 Aligned_cols=220 Identities=21% Similarity=0.325 Sum_probs=151.4
Q ss_pred CccccCcccccccccccceeeecCCC----cEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNG----RVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND------ 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g----~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~------ 437 (602)
.++|...+.||+|+||.||+|+.... ..||||+++...... ...+.+.+|+.++..+.|+++..++...
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS-SDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------C-HHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCH-HHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 56799999999999999999987543 279999987543221 2356788999999777776665543210
Q ss_pred -------------------------c---chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcce
Q 047576 438 -------------------------A---EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAF 489 (602)
Q Consensus 438 -------------------------~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~k 489 (602)
. ....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEE
Confidence 0 0013788999999999999999999 78999999999999999999999
Q ss_pred eecccccccccCCCC--CccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchh
Q 047576 490 VADFGTARLLHADSS--NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLI 566 (602)
Q Consensus 490 L~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~ 566 (602)
|+|||+++....... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||..... .....
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-------~~~~~ 250 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-------AEIYN 250 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-------GGHHH
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh-------HHHHH
Confidence 999999987644322 1223456788999999999999999999999999999999 9999975322 11222
Q ss_pred hhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 567 DVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 567 ~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.+........ ... ....+.+++..||+.||++
T Consensus 251 ~~~~~~~~~~-~~~---~~~~l~~li~~~l~~dp~~ 282 (323)
T 3qup_A 251 YLIGGNRLKQ-PPE---CMEEVYDLMYQCWSADPKQ 282 (323)
T ss_dssp HHHTTCCCCC-CTT---CCHHHHHHHHHTTCSSGGG
T ss_pred HHhcCCCCCC-CCc---cCHHHHHHHHHHccCChhh
Confidence 2222221111 111 2344889999999999974
No 125
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.97 E-value=1.3e-31 Score=271.92 Aligned_cols=222 Identities=26% Similarity=0.426 Sum_probs=153.6
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc----------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND---------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~---------- 437 (602)
.++|...+.||+|+||.||+|+... .||+|+++..... ....+.+.+|+.++..+.|.++..++...
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPT-PQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEE
Confidence 4578999999999999999998743 5999988754332 23456788999999777666655443210
Q ss_pred ------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCC--C
Q 047576 438 ------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD--S 503 (602)
Q Consensus 438 ------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~--~ 503 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++...... .
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 11344889999999999999999999 789999999999999999999999999999765432 1
Q ss_pred CCccccccccccccccccc---cCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhh-ccCCCCCCCh
Q 047576 504 SNQTLLAGSYGYIAPELAY---TMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVL-DQRLPPPVDR 579 (602)
Q Consensus 504 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~-d~~l~~~~~~ 579 (602)
.......||+.|+|||++. +..++.++||||+|+++|+|++|+.||..... ...+.+.+ .....+....
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~ 249 (289)
T 3og7_A 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN-------RDQIIEMVGRGSLSPDLSK 249 (289)
T ss_dssp -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC-------HHHHHHHHHHTSCCCCTTS
T ss_pred ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch-------HHHHHHHhcccccCcchhh
Confidence 2223356899999999986 56688899999999999999999999975322 11112222 1222211111
Q ss_pred hhHHHHHHHHHHHhhccCcCCCC
Q 047576 580 KVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 580 ~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
........+.+++..||+.||++
T Consensus 250 ~~~~~~~~l~~li~~~l~~~p~~ 272 (289)
T 3og7_A 250 VRSNCPKRMKRLMAECLKKKRDE 272 (289)
T ss_dssp SCTTSCHHHHHHHHHHTCSSGGG
T ss_pred ccccCCHHHHHHHHHHccCChhh
Confidence 11113345889999999999974
No 126
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.97 E-value=1.7e-31 Score=278.74 Aligned_cols=219 Identities=22% Similarity=0.307 Sum_probs=148.3
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.+.|.....||+|+||.||+|+.. +++.||||++..... .+.+.+|+.++..+.|+++..++...
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 126 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-----KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV 126 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchh-----HHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence 467899999999999999999875 588999999875432 35677888888666555554433210
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCC---CCcceeecccccccccC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS---KLEAFVADFGTARLLHA 501 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~---~~~~kL~DFG~a~~~~~ 501 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++....
T Consensus 127 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 127 LELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp ECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred EEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 01233789999999999999999999 789999999999999975 88999999999987643
Q ss_pred CCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhh
Q 047576 502 DSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+..+.+.....+.. ..
T Consensus 204 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~~i~~~~~~~~~~-~~ 275 (349)
T 2w4o_A 204 QV-LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG------DQFMFRRILNCEYYFISP-WW 275 (349)
T ss_dssp ----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC------HHHHHHHHHTTCCCCCTT-TT
T ss_pred cc-ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc------cHHHHHHHHhCCCccCCc-hh
Confidence 32 22345789999999999999999999999999999999999999964321 111223333333221110 00
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.+....+.+++.+|++.||++
T Consensus 276 ~~~~~~~~~li~~~L~~dP~~ 296 (349)
T 2w4o_A 276 DEVSLNAKDLVRKLIVLDPKK 296 (349)
T ss_dssp TTSCHHHHHHHHTTSCSSGGG
T ss_pred hhCCHHHHHHHHHHccCChhh
Confidence 112334789999999999974
No 127
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.97 E-value=3.5e-31 Score=281.51 Aligned_cols=218 Identities=23% Similarity=0.282 Sum_probs=151.6
Q ss_pred CccccCc-ccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHH-----------------------
Q 047576 368 PRKIDSK-YCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVL----------------------- 422 (602)
Q Consensus 368 t~~f~~~-~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il----------------------- 422 (602)
.++|... +.||+|+||.||+|+.. +|+.||||++.... .+.+|++++
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--------~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~ 131 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP--------KARREVELHWRASQCPHIVRIVDVYENLYAGR 131 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSH--------HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcch--------hHHHHHHHHHHhcCCCCcceEeEEEeecccCC
Confidence 3456655 68999999999999864 68899999986432 223344433
Q ss_pred -------HhhhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCC---CCcceeec
Q 047576 423 -------SQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS---KLEAFVAD 492 (602)
Q Consensus 423 -------~~l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~---~~~~kL~D 492 (602)
||+++|+|.+++.... ...+++.++..|+.||+.||+||| +.+|+||||||+|||++. ++.+||+|
T Consensus 132 ~~~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~D 207 (400)
T 1nxk_A 132 KCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTD 207 (400)
T ss_dssp EEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred cEEEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEe
Confidence 4555666666665422 234899999999999999999999 789999999999999987 78999999
Q ss_pred ccccccccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccC
Q 047576 493 FGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQR 572 (602)
Q Consensus 493 FG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~ 572 (602)
||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ......+....
T Consensus 208 FG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~~~~~i~~~~ 283 (400)
T 1nxk_A 208 FGFAKETTSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS---PGMKTRIRMGQ 283 (400)
T ss_dssp CTTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC---CSHHHHHHHTC
T ss_pred cccccccCCCC-ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc---HHHHHHHHcCc
Confidence 99998764322 223457899999999999999999999999999999999999999754321110 11112222222
Q ss_pred CCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 573 LPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 573 l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
...+... .......+.+++.+||+.||++
T Consensus 284 ~~~~~~~-~~~~s~~~~~li~~~L~~dP~~ 312 (400)
T 1nxk_A 284 YEFPNPE-WSEVSEEVKMLIRNLLKTEPTQ 312 (400)
T ss_dssp CCCCTTT-TTTSCHHHHHHHHTTSCSSGGG
T ss_pred ccCCCcc-cccCCHHHHHHHHHHCCCChhH
Confidence 2111100 0112234789999999999974
No 128
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.97 E-value=2.1e-31 Score=287.79 Aligned_cols=216 Identities=25% Similarity=0.381 Sum_probs=158.7
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcC-------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERG------------------- 428 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~g------------------- 428 (602)
.++|.....||+|+||.||+|+..++..||||+++..... .+.|.+|+.++..+.|+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e 258 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTE 258 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEeh
Confidence 4578889999999999999999988888999999765432 35678899988555554
Q ss_pred -----ccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCC
Q 047576 429 -----SLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS 503 (602)
Q Consensus 429 -----sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~ 503 (602)
+|.+++... ....+++.++..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 259 ~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 334 (452)
T 1fmk_A 259 YMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334 (452)
T ss_dssp CCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred hhcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence 444444321 1234889999999999999999999 7899999999999999999999999999998765332
Q ss_pred CC-ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCChhh
Q 047576 504 SN-QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 504 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
.. .....++..|+|||++.+..++.++||||||+++|||+| |+.||..... ...... +......+....
T Consensus 335 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-------~~~~~~-i~~~~~~~~~~~- 405 (452)
T 1fmk_A 335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-------REVLDQ-VERGYRMPCPPE- 405 (452)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-------HHHHHH-HHTTCCCCCCTT-
T ss_pred eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH-------HHHHHH-HHcCCCCCCCCC-
Confidence 21 223456788999999999999999999999999999999 9999974321 111122 222222121111
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++..||+.||++
T Consensus 406 --~~~~l~~li~~cl~~dP~~ 424 (452)
T 1fmk_A 406 --CPESLHDLMCQCWRKEPEE 424 (452)
T ss_dssp --SCHHHHHHHHHHTCSSGGG
T ss_pred --CCHHHHHHHHHHccCChhh
Confidence 3345889999999999974
No 129
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.97 E-value=2.2e-31 Score=267.06 Aligned_cols=219 Identities=25% Similarity=0.385 Sum_probs=154.6
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHH-HHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEE-LAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~-~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|...+.||+|+||.||+|+. .++.||||++....... ....+.+.+|++++..+.|+++..++...
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 35788999999999999999997 48899999987554322 23346788899998777776665543311
Q ss_pred ------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCC---eEEeCCCCCCeeeCC--------CCcceeeccc
Q 047576 438 ------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPS---VVHRDISSNNILLNS--------KLEAFVADFG 494 (602)
Q Consensus 438 ------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~---ivH~DLkp~NILld~--------~~~~kL~DFG 494 (602)
.....+++..+..++.|++.||+||| +.+ |+||||||+||+++. ++.+||+|||
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp EECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 01234789999999999999999999 556 999999999999986 6789999999
Q ss_pred ccccccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCC
Q 047576 495 TARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLP 574 (602)
Q Consensus 495 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~ 574 (602)
.+........ ....|++.|+|||++.+..++.++||||+|+++|+|++|+.||..... ......+......
T Consensus 162 ~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~ 232 (271)
T 3dtc_A 162 LAREWHRTTK--MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG-------LAVAYGVAMNKLA 232 (271)
T ss_dssp C---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH-------HHHHHHHHTSCCC
T ss_pred cccccccccc--cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHhhhcCCCC
Confidence 9986644322 235689999999999998999999999999999999999999975322 1111222222222
Q ss_pred CCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 575 PPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 575 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.+.... ....+.+++..||+.||++
T Consensus 233 ~~~~~~---~~~~~~~li~~~l~~~p~~ 257 (271)
T 3dtc_A 233 LPIPST---CPEPFAKLMEDCWNPDPHS 257 (271)
T ss_dssp CCCCTT---CCHHHHHHHHHHTCSSGGG
T ss_pred CCCCcc---cCHHHHHHHHHHhcCCccc
Confidence 222211 2344889999999999974
No 130
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.97 E-value=1.6e-31 Score=278.10 Aligned_cols=217 Identities=20% Similarity=0.282 Sum_probs=159.4
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHH------------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVL------------------------ 422 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il------------------------ 422 (602)
.++|...+.||+|+||.||+|+.. +|+.||||++..... ...+|++++
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 567899999999999999999864 689999999865432 234466655
Q ss_pred --HhhhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCC----Ccceeeccccc
Q 047576 423 --SQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSK----LEAFVADFGTA 496 (602)
Q Consensus 423 --~~l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~----~~~kL~DFG~a 496 (602)
||+++|+|.+.+.. ...+++.++..++.||+.||+||| +.+|+||||||+||++..+ +.+||+|||++
T Consensus 94 v~E~~~gg~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a 167 (342)
T 2qr7_A 94 VTELMKGGELLDKILR---QKFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFA 167 (342)
T ss_dssp EECCCCSCBHHHHHHT---CTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred EEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence 44445555554433 234899999999999999999999 7899999999999998433 35999999999
Q ss_pred ccccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCC
Q 047576 497 RLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPP 576 (602)
Q Consensus 497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~ 576 (602)
+.............||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+..+.......+
T Consensus 168 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~----~~~~~~~~~i~~~~~~~~ 243 (342)
T 2qr7_A 168 KQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD----DTPEEILARIGSGKFSLS 243 (342)
T ss_dssp EECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT----SCHHHHHHHHHHCCCCCC
T ss_pred ccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc----CCHHHHHHHHccCCcccC
Confidence 8776544444456789999999999888899999999999999999999999974211 111122223333332211
Q ss_pred CChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 577 VDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 577 ~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.. ........+.+++.+|++.||++
T Consensus 244 ~~-~~~~~s~~~~~li~~~L~~dP~~ 268 (342)
T 2qr7_A 244 GG-YWNSVSDTAKDLVSKMLHVDPHQ 268 (342)
T ss_dssp ST-TTTTSCHHHHHHHHHHTCSSTTT
T ss_pred cc-ccccCCHHHHHHHHHHCCCChhH
Confidence 10 00012234789999999999985
No 131
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.97 E-value=2.7e-31 Score=290.13 Aligned_cols=216 Identities=25% Similarity=0.344 Sum_probs=164.1
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcc----------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSL---------------- 430 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL---------------- 430 (602)
..+|...+.||+|+||.||+|+.. ++..||||+++..... .+.|.+|+.++..+.|+++
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 294 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc----hHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence 456888899999999999999875 4889999999765432 4568889998855555444
Q ss_pred ---------ccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 431 ---------FRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 431 ---------~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
.+++... ....+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++....
T Consensus 295 ~E~~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 295 TEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp EECCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred EEccCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 4444321 1234789999999999999999999 78999999999999999999999999999987644
Q ss_pred CCCC-ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCCh
Q 047576 502 DSSN-QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDR 579 (602)
Q Consensus 502 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 579 (602)
+... .....++..|+|||++.+..++.++|||||||++|||+| |+.||..... ....+.+......+...
T Consensus 371 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~ 442 (495)
T 1opk_A 371 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--------SQVYELLEKDYRMERPE 442 (495)
T ss_dssp CCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--------GGHHHHHHTTCCCCCCT
T ss_pred CceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCCCC
Confidence 3211 122346778999999999999999999999999999999 9999975321 11223333333222222
Q ss_pred hhHHHHHHHHHHHhhccCcCCCC
Q 047576 580 KVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 580 ~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
. ....+.+++..||+.||++
T Consensus 443 ~---~~~~l~~li~~cl~~dP~~ 462 (495)
T 1opk_A 443 G---CPEKVYELMRACWQWNPSD 462 (495)
T ss_dssp T---CCHHHHHHHHHHTCSSGGG
T ss_pred C---CCHHHHHHHHHHcCcChhH
Confidence 1 3345889999999999974
No 132
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.97 E-value=6.6e-31 Score=284.47 Aligned_cols=175 Identities=28% Similarity=0.372 Sum_probs=132.6
Q ss_pred CCccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc-------
Q 047576 367 TPRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA------- 438 (602)
Q Consensus 367 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~------- 438 (602)
..++|...+.||+|+||.||+|+.. +++.||||++...... ....+++.+|+.++..+.|+++..++....
T Consensus 51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 129 (458)
T 3rp9_A 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFED-LIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKF 129 (458)
T ss_dssp SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcC-HHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccC
Confidence 3578999999999999999999864 7899999998654322 234567889999999999988877654210
Q ss_pred -------------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccc
Q 047576 439 -------------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLL 499 (602)
Q Consensus 439 -------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~ 499 (602)
....+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 130 ~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 130 DELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp CCEEEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred ceEEEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 1123789999999999999999999 789999999999999999999999999999876
Q ss_pred cCCCC---------------------------Ccccccccccccccccc-ccCcCCccchhHHHHHHHHHHHcC
Q 047576 500 HADSS---------------------------NQTLLAGSYGYIAPELA-YTMVMTEKYDVYSFGVVTLEVLMG 545 (602)
Q Consensus 500 ~~~~~---------------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGvil~elltG 545 (602)
..... ......||+.|+|||++ .+..++.++||||+||++|||+||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 43211 12335689999999976 456699999999999999999994
No 133
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=4.4e-31 Score=274.61 Aligned_cols=224 Identities=24% Similarity=0.270 Sum_probs=161.6
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhH--HHHHhhhhHhHHHHHHhhhcCcccc------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETE--ELAFIRSFRNEAQVLSQMERGSLFR------------ 432 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~~~~~E~~il~~l~~gsL~~------------ 432 (602)
.++|...+.||+|+||.||+|+. .+++.||+|++...... .....+.+.+|+.++..+.|+++..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 46799999999999999999986 46889999998654321 1223467888999885555555444
Q ss_pred -------------cccccc-------------------------------------chhhhcHHHHHHHHHHHHHHHHHh
Q 047576 433 -------------ILHNDA-------------------------------------EAVELDWAKRVNIVKAMAHALAYL 462 (602)
Q Consensus 433 -------------~l~~~~-------------------------------------~~~~l~~~~~~~i~~~ia~~L~~L 462 (602)
++.... ....+++..+..++.|++.||+||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 332100 022346788889999999999999
Q ss_pred hhcCCCCeEEeCCCCCCeeeCCCC--cceeecccccccccCCCC----Ccccccccccccccccccc--CcCCccchhHH
Q 047576 463 HHDCSPSVVHRDISSNNILLNSKL--EAFVADFGTARLLHADSS----NQTLLAGSYGYIAPELAYT--MVMTEKYDVYS 534 (602)
Q Consensus 463 H~~~~~~ivH~DLkp~NILld~~~--~~kL~DFG~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS 534 (602)
| +.+|+||||||+||+++.++ .+||+|||++........ ......||+.|+|||++.+ ..++.++||||
T Consensus 185 H---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diws 261 (345)
T 3hko_A 185 H---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261 (345)
T ss_dssp H---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHH
T ss_pred H---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHH
Confidence 9 78999999999999998776 899999999986643211 1234579999999999875 56889999999
Q ss_pred HHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 535 FGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 535 lGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
||+++|||++|+.||.... .......+++.....+... .......+.+++..|++.||++
T Consensus 262 lG~il~el~~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~ 321 (345)
T 3hko_A 262 AGVLLHLLLMGAVPFPGVN-------DADTISQVLNKKLCFENPN-YNVLSPLARDLLSNLLNRNVDE 321 (345)
T ss_dssp HHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCTTSGG-GGGSCHHHHHHHHHHSCSCTTT
T ss_pred HHHHHHHHHHCCCCCCCCC-------hHHHHHHHHhcccccCCcc-cccCCHHHHHHHHHHcCCChhH
Confidence 9999999999999997532 2223344444443322111 0112344789999999999975
No 134
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.97 E-value=4.2e-31 Score=274.16 Aligned_cols=213 Identities=21% Similarity=0.326 Sum_probs=164.8
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHH-----HHHhhhhHhHHHHHHhhhcCccccccccc----
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEE-----LAFIRSFRNEAQVLSQMERGSLFRILHND---- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~-----~~~~~~~~~E~~il~~l~~gsL~~~l~~~---- 437 (602)
.++|.....||+|+||.||+|+. .+++.||||++....... ....+.+.+|+.++..+.|+++..++...
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 46788999999999999999985 578999999987653211 11345678899999888777776654311
Q ss_pred -------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccc
Q 047576 438 -------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARL 498 (602)
Q Consensus 438 -------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~ 498 (602)
.....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 01224789999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCCccccccccccccccccccCcC-CccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCC
Q 047576 499 LHADSSNQTLLAGSYGYIAPELAYTMVM-TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPV 577 (602)
Q Consensus 499 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 577 (602)
...... .....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||..... .+......+.
T Consensus 180 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------------~~~~~~~~~~ 245 (335)
T 3dls_A 180 LERGKL-FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE-------------TVEAAIHPPY 245 (335)
T ss_dssp CCTTCC-BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-------------GTTTCCCCSS
T ss_pred CCCCCc-eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-------------HHhhccCCCc
Confidence 654332 334579999999999988876 7899999999999999999999974221 1222222221
Q ss_pred ChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 578 DRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 578 ~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
. ....+.+++..|+++||++
T Consensus 246 ~-----~~~~l~~li~~~L~~dP~~ 265 (335)
T 3dls_A 246 L-----VSKELMSLVSGLLQPVPER 265 (335)
T ss_dssp C-----CCHHHHHHHHHHTCSSGGG
T ss_pred c-----cCHHHHHHHHHHccCChhh
Confidence 1 1223788999999999974
No 135
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.97 E-value=3e-31 Score=271.76 Aligned_cols=220 Identities=22% Similarity=0.339 Sum_probs=164.7
Q ss_pred CccccCcccccccccccceeeec------CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh-hcCccccccc-----
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL------PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM-ERGSLFRILH----- 435 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l-~~gsL~~~l~----- 435 (602)
.++|...+.||+|+||.||+|+. .+++.||+|++...... ...+.+.+|+.++..+ .|+++..++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL--TEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhH--HHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 45788899999999999999973 35789999999755432 2346788899988776 5655554432
Q ss_pred --------------------cccc---------------hhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCe
Q 047576 436 --------------------NDAE---------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480 (602)
Q Consensus 436 --------------------~~~~---------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NI 480 (602)
.... ...+++.++..++.|++.||+||| +.+|+||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceE
Confidence 2110 113789999999999999999999 78999999999999
Q ss_pred eeCCCCcceeecccccccccCCCCC--ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCccccc
Q 047576 481 LLNSKLEAFVADFGTARLLHADSSN--QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSS 557 (602)
Q Consensus 481 Lld~~~~~kL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~ 557 (602)
+++.++.+||+|||++......... .....+++.|+|||++.+..++.++||||||+++|||+| |+.||.....
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--- 253 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV--- 253 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS---
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc---
Confidence 9999999999999999876544322 223457788999999999999999999999999999999 9999975321
Q ss_pred CCCcccchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 558 SYDPKIMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 558 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.......+........... ....+.+++.+|++.||++
T Consensus 254 ----~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~ 291 (313)
T 1t46_A 254 ----DSKFYKMIKEGFRMLSPEH---APAEMYDIMKTCWDADPLK 291 (313)
T ss_dssp ----SHHHHHHHHHTCCCCCCTT---SCHHHHHHHHHHTCSSGGG
T ss_pred ----hhHHHHHhccCCCCCCccc---CCHHHHHHHHHHcCCCchh
Confidence 1122233333222221111 2234889999999999974
No 136
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.97 E-value=1.5e-30 Score=279.43 Aligned_cols=183 Identities=25% Similarity=0.331 Sum_probs=145.9
Q ss_pred CCCCCccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc----
Q 047576 364 SMPTPRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA---- 438 (602)
Q Consensus 364 ~lp~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~---- 438 (602)
.....++|...+.||+|+||.||+|+.. +++.||||++...... ....+++.+|+.++..+.|+++..++....
T Consensus 21 ~~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 99 (432)
T 3n9x_A 21 NVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFED-LIDCKRILREITILNRLKSDYIIRLYDLIIPDDL 99 (432)
T ss_dssp GCCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCT
T ss_pred cceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcC-hHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCC
Confidence 3444678999999999999999999864 6889999999754332 234567889999999998888776553210
Q ss_pred ----------------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccc
Q 047576 439 ----------------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTA 496 (602)
Q Consensus 439 ----------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a 496 (602)
....+++..+..++.||++||+||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 100 ~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 100 LKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp TTCCCEEEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred CcCCeEEEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 1123789999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCC----------------------Ccccccccccccccccc-ccCcCCccchhHHHHHHHHHHHcCCCCCC
Q 047576 497 RLLHADSS----------------------NQTLLAGSYGYIAPELA-YTMVMTEKYDVYSFGVVTLEVLMGKHPRD 550 (602)
Q Consensus 497 ~~~~~~~~----------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGvil~elltG~~Pf~ 550 (602)
+....... ..+...||+.|+|||++ .+..++.++||||+||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 87654321 12446789999999986 55669999999999999999999766664
No 137
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.97 E-value=3e-31 Score=281.69 Aligned_cols=225 Identities=19% Similarity=0.286 Sum_probs=163.9
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccc--------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFR-------------- 432 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~-------------- 432 (602)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ...+.+.+|++++..+.|+++..
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 85 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG--SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence 467999999999999999999875 5899999998754322 12355678888886555555444
Q ss_pred -------------ccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeee----CCCCcceeecccc
Q 047576 433 -------------ILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILL----NSKLEAFVADFGT 495 (602)
Q Consensus 433 -------------~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILl----d~~~~~kL~DFG~ 495 (602)
++........+++.++..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 3333222223899999999999999999999 7899999999999999 8888899999999
Q ss_pred cccccCCCCCcccccccccccccccccc--------CcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhh
Q 047576 496 ARLLHADSSNQTLLAGSYGYIAPELAYT--------MVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLID 567 (602)
Q Consensus 496 a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~ 567 (602)
++....... .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||....... .....+..
T Consensus 163 a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~---~~~~~~~~ 238 (396)
T 4eut_A 163 ARELEDDEQ-FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR---RNKEVMYK 238 (396)
T ss_dssp CEECCCGGG-SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTT---TCHHHHHH
T ss_pred ceEccCCCc-cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCccc---chHHHHHH
Confidence 987654322 223569999999998865 567889999999999999999999996432110 11111111
Q ss_pred hhcc---------------------CCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 568 VLDQ---------------------RLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 568 ~~d~---------------------~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
++.. .++... .........+.+++.+|++.||++
T Consensus 239 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~l~~ll~~~L~~dP~~ 293 (396)
T 4eut_A 239 IITGKPSGAISGVQKAENGPIDWSGDMPVSC-SLSRGLQVLLTPVLANILEADQEK 293 (396)
T ss_dssp HHHSCCTTCCEEEECSTTCCEEEESSCCTTC-SSCHHHHHHHHHHHHHHSCCCTTT
T ss_pred HhcCCCcccchhheeccCCCcccCccCCccc-ccchHHHhhchHHHHHhhccChhh
Confidence 2111 111111 111335566889999999999985
No 138
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.97 E-value=2.7e-31 Score=274.35 Aligned_cols=229 Identities=24% Similarity=0.328 Sum_probs=168.5
Q ss_pred CCCCccccCcccccccccccceeeec-----CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc--
Q 047576 365 MPTPRKIDSKYCIGTGAYGSVYKAQL-----PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND-- 437 (602)
Q Consensus 365 lp~t~~f~~~~~LG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~-- 437 (602)
+-..++|...+.||+|+||.||+|++ .+++.||||++...... ..+.+.+|++++..+.|+++..++...
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 95 (327)
T 3lxl_A 19 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPD---QQRDFQREIQILKALHSDFIVKYRGVSYG 95 (327)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHH---HHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred hhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHH---HHHHHHHHHHHHHhcCCCceeEEEEEEec
Confidence 33457899999999999999999983 46889999999765433 346788999998666665555432210
Q ss_pred -----------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccc
Q 047576 438 -----------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFG 494 (602)
Q Consensus 438 -----------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG 494 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 172 (327)
T 3lxl_A 96 PGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFG 172 (327)
T ss_dssp SSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGG
T ss_pred CCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccc
Confidence 01234899999999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCCCC---ccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccc-------cCCCcccc
Q 047576 495 TARLLHADSSN---QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLS-------SSYDPKIM 564 (602)
Q Consensus 495 ~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~-------~~~~~~~~ 564 (602)
++......... .....|++.|+|||++.+..++.++||||||+++|+|++|+.||....... ........
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 252 (327)
T 3lxl_A 173 LAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSR 252 (327)
T ss_dssp GCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHH
T ss_pred cceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHH
Confidence 99876543321 222457888999999999889999999999999999999999986432210 00111112
Q ss_pred hhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 565 LIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 565 ~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
..+.+......+.... ....+.+++..||+.||++
T Consensus 253 ~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dP~~ 287 (327)
T 3lxl_A 253 LLELLEEGQRLPAPPA---CPAEVHELMKLCWAPSPQD 287 (327)
T ss_dssp HHHHHHTTCCCCCCTT---CCHHHHHHHHHHTCSSGGG
T ss_pred HHHHhhcccCCCCCCc---ccHHHHHHHHHHcCCChhh
Confidence 2233333333222222 3344889999999999974
No 139
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.97 E-value=3.8e-31 Score=267.15 Aligned_cols=219 Identities=23% Similarity=0.336 Sum_probs=153.9
Q ss_pred CccccCcccccccccccceeeecC----CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP----NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND------ 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~------ 437 (602)
.++|...+.||+|+||.||+|+.. .+..||+|++...... ...+.+.+|+.++..+.|+++..++...
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 91 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD--SVREKFLQEALTMRQFDHPHIVKLIGVITENPVW 91 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSH--HHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCccceEEEEEccCccE
Confidence 467889999999999999999864 3567999998754332 3456788999999777776665543211
Q ss_pred ----------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 438 ----------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 438 ----------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp EEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCc
Confidence 01224889999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCC-ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCCh
Q 047576 502 DSSN-QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDR 579 (602)
Q Consensus 502 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 579 (602)
.... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+.+.... +...
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~-------~~~~~~i~~~~~~-~~~~ 240 (281)
T 1mp8_A 169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-------NDVIGRIENGERL-PMPP 240 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG-------GGHHHHHHTTCCC-CCCT
T ss_pred ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH-------HHHHHHHHcCCCC-CCCC
Confidence 3221 223456788999999998899999999999999999997 9999975321 1112222222111 1111
Q ss_pred hhHHHHHHHHHHHhhccCcCCCC
Q 047576 580 KVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 580 ~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
. ....+.+++..||+.||++
T Consensus 241 ~---~~~~l~~li~~~l~~~p~~ 260 (281)
T 1mp8_A 241 N---CPPTLYSLMTKCWAYDPSR 260 (281)
T ss_dssp T---CCHHHHHHHHHHTCSSGGG
T ss_pred C---CCHHHHHHHHHHccCChhh
Confidence 1 2334789999999999974
No 140
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.3e-31 Score=280.34 Aligned_cols=221 Identities=26% Similarity=0.377 Sum_probs=159.0
Q ss_pred CccccCcccccccccccceeeec----CCCcEEeeeccCCchhH-HHHHhhhhHhHHHHHHhh-----------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL----PNGRVFALKKLNSPETE-ELAFIRSFRNEAQVLSQM----------------- 425 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~----~~g~~vavK~l~~~~~~-~~~~~~~~~~E~~il~~l----------------- 425 (602)
.++|...+.||+|+||.||+|+. .+++.||||+++..... .....+.+.+|++++..+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46899999999999999999986 47899999998754321 111234566777777544
Q ss_pred ---------hcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccc
Q 047576 426 ---------ERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTA 496 (602)
Q Consensus 426 ---------~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a 496 (602)
++++|.+++.. ...+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred eEEEEeecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 34444444432 234889999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCC-CCccccccccccccccccccC--cCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCC
Q 047576 497 RLLHADS-SNQTLLAGSYGYIAPELAYTM--VMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRL 573 (602)
Q Consensus 497 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l 573 (602)
+...... .......||+.|+|||++.+. .++.++|||||||++|||+||+.||...... .........+.....
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~---~~~~~~~~~~~~~~~ 283 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK---NSQAEISRRILKSEP 283 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC---CCHHHHHHHHHHCCC
T ss_pred eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc---chHHHHHHHHhccCC
Confidence 8654322 122335799999999999863 4788999999999999999999999743211 011111122222222
Q ss_pred CCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 574 PPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 574 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
+.+ .. ....+.+++.+||+.||++
T Consensus 284 ~~~--~~---~~~~~~~li~~~L~~dP~~ 307 (355)
T 1vzo_A 284 PYP--QE---MSALAKDLIQRLLMKDPKK 307 (355)
T ss_dssp CCC--TT---SCHHHHHHHHHHTCSSGGG
T ss_pred CCC--cc---cCHHHHHHHHHHhhhCHHH
Confidence 211 11 2234788999999999974
No 141
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=4.2e-31 Score=279.75 Aligned_cols=182 Identities=29% Similarity=0.355 Sum_probs=137.8
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhh-cCcccccccccc-------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME-RGSLFRILHNDA------- 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~-~gsL~~~l~~~~------- 438 (602)
.++|.....||+|+||.||+|+. .+|+.||||++...... ....+.+.+|+.++..+. |+++..++....
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQN-STDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CC-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccC-hHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 35788999999999999999985 47899999998654322 223456778999998886 877766544210
Q ss_pred ---------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCC-
Q 047576 439 ---------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD- 502 (602)
Q Consensus 439 ---------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~- 502 (602)
....+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 87 ~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 87 YLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp EEEEECCSEEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred EEEecccCcCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 1234788889999999999999999 789999999999999999999999999999865321
Q ss_pred --------------------CCCcccccccccccccccccc-CcCCccchhHHHHHHHHHHHcCCCCCCCCc
Q 047576 503 --------------------SSNQTLLAGSYGYIAPELAYT-MVMTEKYDVYSFGVVTLEVLMGKHPRDLHS 553 (602)
Q Consensus 503 --------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~Pf~~~~ 553 (602)
....+...||+.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 235 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 111233579999999999887 568999999999999999999999997543
No 142
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.97 E-value=4.3e-31 Score=273.67 Aligned_cols=220 Identities=22% Similarity=0.365 Sum_probs=153.7
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHH-------------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVL------------------------- 422 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il------------------------- 422 (602)
.++|...+.||+|+||.||+|+. +++.||||++...... .+..|.++.
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~------~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 84 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQ------NFINEKNIYRVPLMEHDNIARFIVGDERVTADGR 84 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHH------HHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSC
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchh------hHHHHHHHHHHHhccCcchhhheecccccccCCC
Confidence 46799999999999999999987 6899999998644322 222233332
Q ss_pred -------HhhhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCC---------CeEEeCCCCCCeeeCCCC
Q 047576 423 -------SQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSP---------SVVHRDISSNNILLNSKL 486 (602)
Q Consensus 423 -------~~l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~---------~ivH~DLkp~NILld~~~ 486 (602)
||+++|+|.+++.. ...++..+..++.|++.||+||| +. +|+||||||+|||++.++
T Consensus 85 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~ 157 (336)
T 3g2f_A 85 MEYLLVMEYYPNGSLXKYLSL----HTSDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDG 157 (336)
T ss_dssp EEEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTS
T ss_pred ceEEEEEecCCCCcHHHHHhh----cccchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCC
Confidence 44445555555532 23578899999999999999999 67 999999999999999999
Q ss_pred cceeecccccccccCCCC--------Ccccccccccccccccccc-------CcCCccchhHHHHHHHHHHHcCCCCCCC
Q 047576 487 EAFVADFGTARLLHADSS--------NQTLLAGSYGYIAPELAYT-------MVMTEKYDVYSFGVVTLEVLMGKHPRDL 551 (602)
Q Consensus 487 ~~kL~DFG~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGvil~elltG~~Pf~~ 551 (602)
.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|||+||..||..
T Consensus 158 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~ 237 (336)
T 3g2f_A 158 TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP 237 (336)
T ss_dssp CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence 999999999987643221 1223469999999999887 4567889999999999999999887643
Q ss_pred CcccccCCC----------cccchhhhh-----ccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 552 HSTLSSSYD----------PKIMLIDVL-----DQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 552 ~~~~~~~~~----------~~~~~~~~~-----d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
......... ........+ .+.++..... .......+.+++..||+.||++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~ 302 (336)
T 3g2f_A 238 GESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKE-NSLAVRSLKETIEDCWDQDAEA 302 (336)
T ss_dssp TSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCC-CSHHHHHHHHHHHHHSCSSGGG
T ss_pred ccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCccccc-ccchHHHHHHHHHHHhcCChhh
Confidence 322111000 000001111 1112211111 1224556899999999999974
No 143
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.97 E-value=5e-31 Score=284.71 Aligned_cols=211 Identities=22% Similarity=0.314 Sum_probs=159.5
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccc-------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRIL------------- 434 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l------------- 434 (602)
.++|...+.||+|+||.||+|+.. |+.||||+++... ..+.|.+|+.++..+.|+++..++
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv 265 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence 457888899999999999999884 7899999997654 246788899998666665555443
Q ss_pred -------------ccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 435 -------------HNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 435 -------------~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
... ....+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++....
T Consensus 266 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341 (450)
T ss_dssp EECCTTCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence 221 1122688999999999999999999 78999999999999999999999999999986432
Q ss_pred CCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCChh
Q 047576 502 DSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRK 580 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 580 (602)
.. ....+++.|+|||++.+..++.++|||||||++|||+| |+.||..... ......+ ....+.+....
T Consensus 342 ~~---~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-------~~~~~~i-~~~~~~~~p~~ 410 (450)
T 1k9a_A 342 TQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-------KDVVPRV-EKGYKMDAPDG 410 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT-------TTHHHHH-HTTCCCCCCTT
T ss_pred cc---cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHH-HcCCCCCCCCc
Confidence 21 22357889999999999999999999999999999998 9999975321 1111222 22111111111
Q ss_pred hHHHHHHHHHHHhhccCcCCCC
Q 047576 581 VIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 581 ~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++..||+.||++
T Consensus 411 ---~~~~l~~li~~cl~~dp~~ 429 (450)
T 1k9a_A 411 ---CPPAVYDVMKNCWHLDAAT 429 (450)
T ss_dssp ---CCHHHHHHHHHHTCSSGGG
T ss_pred ---CCHHHHHHHHHHcCCChhH
Confidence 3345889999999999974
No 144
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.97 E-value=1e-30 Score=276.88 Aligned_cols=183 Identities=16% Similarity=0.237 Sum_probs=147.8
Q ss_pred CCCccccCccccccc--ccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc-----
Q 047576 366 PTPRKIDSKYCIGTG--AYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND----- 437 (602)
Q Consensus 366 p~t~~f~~~~~LG~G--~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~----- 437 (602)
+...+|...+.||+| +||.||+|+.. +|+.||||++...... ....+.+.+|+.++..+.|+++..++...
T Consensus 22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 100 (389)
T 3gni_B 22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS-NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE 100 (389)
T ss_dssp CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC-hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCE
Confidence 456789999999999 99999999875 7999999998755432 23456788899999776666665543210
Q ss_pred -------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccc
Q 047576 438 -------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARL 498 (602)
Q Consensus 438 -------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~ 498 (602)
.....+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||.+..
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 101 LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 01134789999999999999999999 78999999999999999999999999998865
Q ss_pred ccCCC-------CCcccccccccccccccccc--CcCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 499 LHADS-------SNQTLLAGSYGYIAPELAYT--MVMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 499 ~~~~~-------~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 240 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 240 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 43211 11223468999999999987 57899999999999999999999999753
No 145
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.97 E-value=3.5e-31 Score=271.29 Aligned_cols=181 Identities=26% Similarity=0.319 Sum_probs=143.2
Q ss_pred ccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc---------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA--------- 438 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~--------- 438 (602)
++|...+.||+|+||.||+|+.. +|+.||+|++...... ....+.+.+|+.++..+.|+++..++....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDD-PVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 56888999999999999999875 5899999988655432 234567888999998888888776543210
Q ss_pred -------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCC
Q 047576 439 -------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 505 (602)
Q Consensus 439 -------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~ 505 (602)
....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+.........
T Consensus 82 e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 82 EYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp ECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 1233788999999999999999999 789999999999999999999999999999877644444
Q ss_pred cccccccccccccccccc-CcCCccchhHHHHHHHHHHHcCCCCCCCCc
Q 047576 506 QTLLAGSYGYIAPELAYT-MVMTEKYDVYSFGVVTLEVLMGKHPRDLHS 553 (602)
Q Consensus 506 ~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~Pf~~~~ 553 (602)
.....||+.|+|||++.+ ..++.++||||+|+++|+|+||+.||....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 207 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS 207 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 445678999999999876 568999999999999999999999997543
No 146
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.97 E-value=5.2e-31 Score=265.66 Aligned_cols=216 Identities=22% Similarity=0.349 Sum_probs=162.5
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccc---------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFR--------------- 432 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~--------------- 432 (602)
.++|...+.||+|+||.||+|+..+++.||+|++...... .+.+.+|++++..+.|+++..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e 87 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITE 87 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCccc----HHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEe
Confidence 4678889999999999999999888889999998755432 356788999886655555443
Q ss_pred ---------ccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCC
Q 047576 433 ---------ILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS 503 (602)
Q Consensus 433 ---------~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~ 503 (602)
++... ....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+.......
T Consensus 88 ~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T 1qpc_A 88 YMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163 (279)
T ss_dssp CCTTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred cCCCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc
Confidence 33321 1235889999999999999999999 7899999999999999999999999999998765432
Q ss_pred CC-ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCChhh
Q 047576 504 SN-QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 504 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
.. .....++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+. ..........
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------~~~~~~~~-~~~~~~~~~~- 234 (279)
T 1qpc_A 164 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-------PEVIQNLE-RGYRMVRPDN- 234 (279)
T ss_dssp EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-------HHHHHHHH-TTCCCCCCTT-
T ss_pred cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH-------HHHHHHHh-cccCCCCccc-
Confidence 11 222456788999999998889999999999999999999 9999975321 11111111 1111111111
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++..|++.||++
T Consensus 235 --~~~~l~~li~~~l~~~p~~ 253 (279)
T 1qpc_A 235 --CPEELYQLMRLCWKERPED 253 (279)
T ss_dssp --CCHHHHHHHHHHTCSSGGG
T ss_pred --ccHHHHHHHHHHhccChhh
Confidence 2234889999999999974
No 147
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.97 E-value=2.2e-31 Score=274.82 Aligned_cols=179 Identities=20% Similarity=0.274 Sum_probs=139.1
Q ss_pred ccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc---------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA--------- 438 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~--------- 438 (602)
++|...+.||+|+||.||+|+.. +++.||+|++...... .....+.+|+.++..+.|+++..++....
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc--ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence 46888899999999999999875 7899999998754432 23346678999998888877766543210
Q ss_pred -------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCC
Q 047576 439 -------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 505 (602)
Q Consensus 439 -------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~ 505 (602)
....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.........
T Consensus 80 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 156 (324)
T 3mtl_A 80 EYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 156 (324)
T ss_dssp ECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred cccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccc
Confidence 1233788999999999999999999 789999999999999999999999999999876544444
Q ss_pred cccccccccccccccccc-CcCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 506 QTLLAGSYGYIAPELAYT-MVMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 506 ~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
.....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 204 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGS 204 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 444578999999999876 56899999999999999999999999754
No 148
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.97 E-value=1.4e-31 Score=282.32 Aligned_cols=212 Identities=17% Similarity=0.170 Sum_probs=152.1
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh---hcCc--------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM---ERGS-------------- 429 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l---~~gs-------------- 429 (602)
.++|...+.||+|+||.||+|+. .+|+.||||++...........+.+.+|+.+++.+ .|++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788999999999999999996 46999999998643222222345667777443222 3333
Q ss_pred ----------------------------------ccccccccc----chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeE
Q 047576 430 ----------------------------------LFRILHNDA----EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVV 471 (602)
Q Consensus 430 ----------------------------------L~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iv 471 (602)
|.+++.... ....+++..+..|+.||+.||+||| +.+|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iv 228 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 228 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCee
Confidence 333332211 0123456888899999999999999 78999
Q ss_pred EeCCCCCCeeeCCCCcceeecccccccccCCCCCccccccccccccccccccC-----------cCCccchhHHHHHHHH
Q 047576 472 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTM-----------VMTEKYDVYSFGVVTL 540 (602)
Q Consensus 472 H~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwSlGvil~ 540 (602)
||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++|
T Consensus 229 HrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ 304 (377)
T 3byv_A 229 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY 304 (377)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred cCCCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence 999999999999999999999999986432 2333567 999999999887 8999999999999999
Q ss_pred HHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 541 EVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 541 elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
||+||+.||...... .....+... . ...+ ..+.+++.+||+.||++
T Consensus 305 elltg~~Pf~~~~~~-------~~~~~~~~~-~-~~~~-------~~~~~li~~~L~~dp~~ 350 (377)
T 3byv_A 305 WIWCADLPITKDAAL-------GGSEWIFRS-C-KNIP-------QPVRALLEGFLRYPKED 350 (377)
T ss_dssp HHHHSSCCC-------------CCSGGGGSS-C-CCCC-------HHHHHHHHHHTCSSGGG
T ss_pred HHHHCCCCCcccccc-------cchhhhhhh-c-cCCC-------HHHHHHHHHHcCCCchh
Confidence 999999999743221 111112211 1 1222 23788999999999974
No 149
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.97 E-value=3.9e-31 Score=270.91 Aligned_cols=224 Identities=19% Similarity=0.251 Sum_probs=153.4
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccc-----------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILH----------- 435 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~----------- 435 (602)
..+|...+.||+|+||.||+|+. .+|+.||+|++...........+.+.+|+.++..+.|+++..++.
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 46789999999999999999985 578999999987543333345567888999987666666554432
Q ss_pred --------------ccc-chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 436 --------------NDA-EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 436 --------------~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
... ....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 110 1233788899999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChh
Q 047576 501 ADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRK 580 (602)
Q Consensus 501 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 580 (602)
..........|++.|+|||++.+..++.++||||||+++|+|++|+.||..... ........+.....+......
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 262 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-----NLYSLCKKIEQCDYPPLPSDH 262 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C-----CHHHHHHHHHTTCSCCCCTTT
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch-----hHHHHHHHhhcccCCCCcccc
Confidence 443333445789999999999999999999999999999999999999964321 111111112222222111111
Q ss_pred hHHHHHHHHHHHhhccCcCCCC
Q 047576 581 VIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 581 ~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++..||+.||++
T Consensus 263 ---~~~~l~~li~~~l~~dp~~ 281 (310)
T 2wqm_A 263 ---YSEELRQLVNMCINPDPEK 281 (310)
T ss_dssp ---SCHHHHHHHHHHTCSSGGG
T ss_pred ---cCHHHHHHHHHHcCCChhh
Confidence 2234889999999999974
No 150
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.97 E-value=6.1e-31 Score=265.99 Aligned_cols=218 Identities=25% Similarity=0.341 Sum_probs=166.9
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|.....||+|+||.||+|+.. +++.||+|++...........+.+.+|++++..+.|+++..++...
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 467999999999999999999865 6889999998655433333346788899999777777666543311
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS 504 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~ 504 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~-- 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-- 167 (284)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS--
T ss_pred EEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCccc--
Confidence 01234788999999999999999999 889999999999999999999999999998765432
Q ss_pred CccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHHH
Q 047576 505 NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQD 584 (602)
Q Consensus 505 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 584 (602)
......|++.|+|||++.+..++.++||||+|+++|+|++|+.||+.... ......+.......+. . .
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~~~~--~---~ 235 (284)
T 2vgo_A 168 RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH-------TETHRRIVNVDLKFPP--F---L 235 (284)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHTTCCCCCT--T---S
T ss_pred ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH-------hHHHHHHhccccCCCC--c---C
Confidence 22345789999999999999999999999999999999999999975321 1112233333222111 1 1
Q ss_pred HHHHHHHHhhccCcCCCC
Q 047576 585 ILLVSTISFACLQSNPKS 602 (602)
Q Consensus 585 ~~~l~~l~~~Cl~~dP~e 602 (602)
...+.+++..|++.||++
T Consensus 236 ~~~~~~li~~~l~~~p~~ 253 (284)
T 2vgo_A 236 SDGSKDLISKLLRYHPPQ 253 (284)
T ss_dssp CHHHHHHHHHHSCSSGGG
T ss_pred CHHHHHHHHHHhhcCHhh
Confidence 233788999999999974
No 151
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.97 E-value=1.5e-30 Score=273.81 Aligned_cols=181 Identities=25% Similarity=0.296 Sum_probs=141.3
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccccc-------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDAE------- 439 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~~------- 439 (602)
.++|.....||+|+||.||+|+. .+++.||||++...... ....+.+.+|+.++..+.|+++..++.....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCC-hHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 46799999999999999999975 46899999998754322 2245678899999999999888766542100
Q ss_pred ------------------hhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 440 ------------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 440 ------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
...+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 103 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 103 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179 (371)
T ss_dssp CEEEEEEECCSEEHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred cceEEEEEcCCCCHHHHHhhccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence 123688899999999999999999 78999999999999999999999999999987643
Q ss_pred CCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCc
Q 047576 502 DSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHS 553 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~ 553 (602)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 180 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 230 (371)
T 2xrw_A 180 SF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 230 (371)
T ss_dssp -----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cc-ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 22 2233578999999999999999999999999999999999999997543
No 152
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=4.3e-29 Score=258.28 Aligned_cols=256 Identities=21% Similarity=0.311 Sum_probs=201.6
Q ss_pred CCCCCCCceeCCC----------CCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCC
Q 047576 89 DHCEWIGITCNSA----------GSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQ 158 (602)
Q Consensus 89 ~~C~w~gv~C~~~----------~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~ 158 (602)
+.|+|..+.|... ..++.++++...+. .+..-.|+.+++|+.|++. .+.+.+..|..|+++++|+
T Consensus 29 c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~---~~~~~~~~~l~~L~~L~L~--~n~l~~~~~~~~~~l~~L~ 103 (330)
T 1xku_A 29 CQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKIT---EIKDGDFKNLKNLHTLILI--NNKISKISPGAFAPLVKLE 103 (330)
T ss_dssp CEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCC---CBCTTTTTTCTTCCEEECC--SSCCCCBCTTTTTTCTTCC
T ss_pred CcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCC---EeChhhhccCCCCCEEECC--CCcCCeeCHHHhcCCCCCC
Confidence 4578999999632 24556676544332 2333346667777777776 5566666688888888899
Q ss_pred EEECcCCcCcc----cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCC--CCcccccCcCCCceeecccccC
Q 047576 159 LLDLSSNRLRG----RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIG--PIPLTLSRLTSLKILILAQNQL 232 (602)
Q Consensus 159 ~L~Ls~N~i~~----~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~L~~N~l 232 (602)
+|+|++|+|+. ..++|++|++++|.+++..+..|.++++|++|++++|.++. ..+..+.++++|++|++++|++
T Consensus 104 ~L~Ls~n~l~~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 104 RLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp EEECCSSCCSBCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred EEECCCCcCCccChhhcccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 99998888873 24688889998888888888888888889999998888853 6677888888889999988888
Q ss_pred CCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccC
Q 047576 233 SGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIA 312 (602)
Q Consensus 233 ~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 312 (602)
+.+|..+. ++|+.|++++|++++..|..+..+++|++|++++|.+++..+..+..+++|++|+|++|+++ .+|..+.
T Consensus 184 ~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 260 (330)
T 1xku_A 184 TTIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLA 260 (330)
T ss_dssp CSCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTT
T ss_pred ccCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhc
Confidence 88887665 78888899888888887888888888888999888888877778888888889999988888 6788888
Q ss_pred CCCCCCEEeCCCCCCCCCCCcccccc------cccccccccCCcCC
Q 047576 313 SMEDLTWLDLSNNNIKGSIPGEITKL------SRLDYLNLSGNKLS 352 (602)
Q Consensus 313 ~l~~L~~L~L~~N~l~~~~p~~~~~l------~~L~~L~l~~N~l~ 352 (602)
.+++|+.|++++|++++..+..|... +.|+.|++++|++.
T Consensus 261 ~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 261 DHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp TCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred cCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccc
Confidence 88888899998888887766666543 66788888888875
No 153
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.97 E-value=8.9e-31 Score=264.50 Aligned_cols=222 Identities=22% Similarity=0.305 Sum_probs=166.4
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc--------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA-------- 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~-------- 438 (602)
.++|...+.||+|+||.||+|... +|+.||+|++...... ....+.+.+|+.++..+.|+++..++....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 578999999999999999999864 6899999998654432 223467888999998777777665543210
Q ss_pred --------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCc---ceeecccccccccC
Q 047576 439 --------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLE---AFVADFGTARLLHA 501 (602)
Q Consensus 439 --------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~---~kL~DFG~a~~~~~ 501 (602)
....+++.++..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||.+.....
T Consensus 84 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 1233788999999999999999999 789999999999999987655 99999999987654
Q ss_pred CCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhh
Q 047576 502 DSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
.. ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||..... ......+.......+... .
T Consensus 161 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~~~~~~-~ 231 (284)
T 3kk8_A 161 SE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-------HRLYAQIKAGAYDYPSPE-W 231 (284)
T ss_dssp SC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCCCCCTTT-T
T ss_pred Cc-cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch-------hHHHHHHHhccccCCchh-h
Confidence 32 22335789999999999999999999999999999999999999964321 111222222222211100 0
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
......+.+++..|++.||++
T Consensus 232 ~~~~~~~~~li~~~l~~dp~~ 252 (284)
T 3kk8_A 232 DTVTPEAKSLIDSMLTVNPKK 252 (284)
T ss_dssp TTSCHHHHHHHHHHSCSSTTT
T ss_pred cccCHHHHHHHHHHcccChhh
Confidence 112234789999999999975
No 154
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.97 E-value=3.9e-31 Score=271.11 Aligned_cols=223 Identities=22% Similarity=0.311 Sum_probs=157.3
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|...+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+.++..+.|+++..++...
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467999999999999999999864 7899999999766544445567888999999777776665543311
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS 504 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~ 504 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp EECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 01234789999999999999999999 78999999999999999999999999999977644321
Q ss_pred -CccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHH
Q 047576 505 -NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQ 583 (602)
Q Consensus 505 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 583 (602)
......|++.|+|||++.+..++.++||||||+++|||++|+.||...... .+...+....+.+. .....
T Consensus 190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~-~~~~~ 260 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--------VMGAHINQAIPRPS-TVRPG 260 (309)
T ss_dssp -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--------HHHHHHHSCCCCGG-GTSTT
T ss_pred ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--------HHHHHhccCCCCcc-ccCCC
Confidence 223356899999999999989999999999999999999999999753221 11122222211110 00001
Q ss_pred HHHHHHHHHhhccCcCCCC
Q 047576 584 DILLVSTISFACLQSNPKS 602 (602)
Q Consensus 584 ~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+||+.||++
T Consensus 261 ~~~~l~~li~~~l~~dP~~ 279 (309)
T 2h34_A 261 IPVAFDAVIARGMAKNPED 279 (309)
T ss_dssp CCTHHHHHHHHHTCSSGGG
T ss_pred CCHHHHHHHHHhccCCHHH
Confidence 1233778999999999974
No 155
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.97 E-value=9.8e-30 Score=276.57 Aligned_cols=267 Identities=26% Similarity=0.336 Sum_probs=213.5
Q ss_pred CCCCceeCCC----------CCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEE
Q 047576 92 EWIGITCNSA----------GSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLD 161 (602)
Q Consensus 92 ~w~gv~C~~~----------~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~ 161 (602)
.|..|.|... ..++.|+++...+. .+..-.|..+++|+.|++. .+.+.+..|..|+++++|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~---~~~~~~~~~l~~L~~L~L~--~n~i~~~~~~~~~~l~~L~~L~ 86 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIK---TLNQDEFASFPHLEELELN--ENIVSAVEPGAFNNLFNLRTLG 86 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCC---EECTTTTTTCTTCCEEECT--TSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccc---eECHhHccCCCCCCEEECC--CCccCEeChhhhhCCccCCEEE
Confidence 4778888632 25667777654432 3334457778888888876 5677777789999999999999
Q ss_pred CcCCcCcc-------cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCC
Q 047576 162 LSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSG 234 (602)
Q Consensus 162 Ls~N~i~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 234 (602)
|++|+|++ .+++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|+.|+|++|++++
T Consensus 87 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 166 (477)
T 2id5_A 87 LRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS 166 (477)
T ss_dssp CCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSS
T ss_pred CCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcc
Confidence 99999873 47899999999999999999999999999999999999999889999999999999999999999
Q ss_pred Ccc-cccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCC
Q 047576 235 LPQ-EIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIAS 313 (602)
Q Consensus 235 ip~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 313 (602)
+|. .+.++++|+.|+|++|.+++..+..|..+++|++|++++|.+.+.+|.......+|+.|+|++|++++..+..+..
T Consensus 167 ~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 246 (477)
T 2id5_A 167 IPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRH 246 (477)
T ss_dssp CCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTT
T ss_pred cChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcC
Confidence 764 5889999999999999999888888888888888888888777776666666667777777777777544456777
Q ss_pred CCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccCCCCCcCC
Q 047576 314 MEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYSNKHLS 363 (602)
Q Consensus 314 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~ 363 (602)
+++|+.|+|++|++++..+..+..+++|+.|++++|++++..|..+..+.
T Consensus 247 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 296 (477)
T 2id5_A 247 LVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLN 296 (477)
T ss_dssp CTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCT
T ss_pred ccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcc
Confidence 77777777777777766666777777777777777777776666654433
No 156
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.97 E-value=6.9e-31 Score=275.85 Aligned_cols=222 Identities=24% Similarity=0.378 Sum_probs=163.4
Q ss_pred ccccCcccccccccccceeeecC-CCcEEeeeccCCch-----hHHHHHhhhhHhHHHHHHhh-hcCccccccccc----
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPE-----TEELAFIRSFRNEAQVLSQM-ERGSLFRILHND---- 437 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~-----~~~~~~~~~~~~E~~il~~l-~~gsL~~~l~~~---- 437 (602)
++|.....||+|+||.||+|+.. +|+.||||++.... .......+.+.+|+.++..+ .|+++..++...
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 56888899999999999999875 79999999886432 12233456788899888665 455554433210
Q ss_pred ------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccc
Q 047576 438 ------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLL 499 (602)
Q Consensus 438 ------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~ 499 (602)
.....+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 01234789999999999999999999 789999999999999999999999999999876
Q ss_pred cCCCCCccccccccccccccccccC------cCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCC
Q 047576 500 HADSSNQTLLAGSYGYIAPELAYTM------VMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRL 573 (602)
Q Consensus 500 ~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l 573 (602)
.... ......||+.|+|||++.+. .++.++|||||||++|+|+||+.||..... ...+..+.....
T Consensus 251 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-------~~~~~~i~~~~~ 322 (365)
T 2y7j_A 251 EPGE-KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ-------ILMLRMIMEGQY 322 (365)
T ss_dssp CTTC-CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCC
T ss_pred CCCc-ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhCCC
Confidence 5433 23346799999999988643 578899999999999999999999974321 112222333322
Q ss_pred CCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 574 PPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 574 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
..+. .........+.+++.+|++.||++
T Consensus 323 ~~~~-~~~~~~~~~~~~li~~~L~~dP~~ 350 (365)
T 2y7j_A 323 QFSS-PEWDDRSSTVKDLISRLLQVDPEA 350 (365)
T ss_dssp CCCH-HHHSSSCHHHHHHHHHHSCSSTTT
T ss_pred CCCC-cccccCCHHHHHHHHHHcCCChhH
Confidence 2211 000112344889999999999975
No 157
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.97 E-value=5e-31 Score=270.45 Aligned_cols=220 Identities=23% Similarity=0.314 Sum_probs=161.5
Q ss_pred CccccCcccccccccccceeeec------CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh-hcCccccc-------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL------PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM-ERGSLFRI------- 433 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l-~~gsL~~~------- 433 (602)
.++|...+.||+|+||.||+|+. .+++.||||++...... ...+.+.+|+.++..+ .|+++..+
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 103 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGACTKP 103 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCc--HHHHHHHHHHHHHHhcccCCCeeeEEEEEecC
Confidence 46789999999999999999963 46789999999765432 2345678898888665 34444433
Q ss_pred -------------------cccccc-------------hhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCee
Q 047576 434 -------------------LHNDAE-------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNIL 481 (602)
Q Consensus 434 -------------------l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NIL 481 (602)
+..... ...+++.++..++.|++.||.||| +.+|+||||||+||+
T Consensus 104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil 180 (316)
T 2xir_A 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNIL 180 (316)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEE
T ss_pred CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEE
Confidence 322111 112789999999999999999999 789999999999999
Q ss_pred eCCCCcceeecccccccccCCCCC--ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccC
Q 047576 482 LNSKLEAFVADFGTARLLHADSSN--QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSS 558 (602)
Q Consensus 482 ld~~~~~kL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~ 558 (602)
++.++.+||+|||+++........ .....||+.|+|||++.+..++.++||||||+++|||+| |+.||.....
T Consensus 181 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~---- 256 (316)
T 2xir_A 181 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI---- 256 (316)
T ss_dssp ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC----
T ss_pred ECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccch----
Confidence 999999999999999876443322 223457889999999999999999999999999999998 9999975321
Q ss_pred CCcccchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 559 YDPKIMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 559 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
...+...+......+.... ....+.+++..||+.||++
T Consensus 257 ---~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~ 294 (316)
T 2xir_A 257 ---DEEFCRRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQ 294 (316)
T ss_dssp ---SHHHHHHHHHTCCCCCCTT---CCHHHHHHHHHHTCSSGGG
T ss_pred ---hHHHHHHhccCccCCCCCC---CCHHHHHHHHHHcCCChhh
Confidence 1111112211111111111 2234788999999999974
No 158
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.97 E-value=6.9e-31 Score=271.74 Aligned_cols=182 Identities=19% Similarity=0.257 Sum_probs=138.8
Q ss_pred CCccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc-------
Q 047576 367 TPRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA------- 438 (602)
Q Consensus 367 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~------- 438 (602)
..++|...+.||+|+||.||+|+. .+++.||||+++..... ....+.+.+|+.++..+.|+++..++....
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE-EGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccc-cccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 357899999999999999999975 47899999999755432 234467788999998888887776543210
Q ss_pred --------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeee-----CCCCcceeecccccccc
Q 047576 439 --------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILL-----NSKLEAFVADFGTARLL 499 (602)
Q Consensus 439 --------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILl-----d~~~~~kL~DFG~a~~~ 499 (602)
....+++.++..|+.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++...
T Consensus 111 v~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 111 IFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp EEECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred EEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 1224789999999999999999999 7899999999999999 45556999999999877
Q ss_pred cCCCCCccccccccccccccccccCc-CCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 500 HADSSNQTLLAGSYGYIAPELAYTMV-MTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 500 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
...........||+.|+|||++.+.. ++.++||||+||++|||++|+.||...
T Consensus 188 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 241 (329)
T 3gbz_A 188 GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD 241 (329)
T ss_dssp C-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCC
Confidence 54444444467899999999998754 899999999999999999999999754
No 159
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.97 E-value=3.6e-32 Score=277.10 Aligned_cols=221 Identities=26% Similarity=0.401 Sum_probs=145.9
Q ss_pred ccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHh--hhc-------------------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQ--MER------------------- 427 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~--l~~------------------- 427 (602)
++|...+.||+|+||.||+|+. +|+.||||++..... ..+.+|.+++.. +.|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~------~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 75 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE------RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-TTH------HHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEecccch------hhHHHHHHHHHHHhccCcceeeeeeecccCCCccce
Confidence 5788999999999999999987 488999999875432 334556666533 344
Q ss_pred ----------CccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhc-----CCCCeEEeCCCCCCeeeCCCCcceeec
Q 047576 428 ----------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHD-----CSPSVVHRDISSNNILLNSKLEAFVAD 492 (602)
Q Consensus 428 ----------gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-----~~~~ivH~DLkp~NILld~~~~~kL~D 492 (602)
|+|.+++. ...+++.++..++.|++.||+|||.. ++++|+||||||+||+++.++.+||+|
T Consensus 76 ~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 151 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEEEECCTTCCHHHHHH----HCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred eEEEEeccCCCCHHHHHh----ccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEee
Confidence 44444442 22467888999999999999999932 157999999999999999999999999
Q ss_pred ccccccccCCCCC----ccccccccccccccccccC------cCCccchhHHHHHHHHHHHcC----------CCCCCCC
Q 047576 493 FGTARLLHADSSN----QTLLAGSYGYIAPELAYTM------VMTEKYDVYSFGVVTLEVLMG----------KHPRDLH 552 (602)
Q Consensus 493 FG~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltG----------~~Pf~~~ 552 (602)
||++......... .....||+.|+|||++.+. .++.++|||||||++|||+|| +.||...
T Consensus 152 Fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~ 231 (303)
T 3gxj_A 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 231 (303)
T ss_dssp CCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTT
T ss_pred cCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccccc
Confidence 9999776543322 2234699999999998776 445789999999999999999 5555432
Q ss_pred cccccCCCcccchhhhhccCCCCCCCh--hhHHHHHHHHHHHhhccCcCCCC
Q 047576 553 STLSSSYDPKIMLIDVLDQRLPPPVDR--KVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 553 ~~~~~~~~~~~~~~~~~d~~l~~~~~~--~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....... ......+.+..+.+.... ...+....+.+++..||+.||++
T Consensus 232 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 281 (303)
T 3gxj_A 232 VPSDPSV--EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAA 281 (303)
T ss_dssp CC-CCCC--C-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGG
T ss_pred CCCCccH--HHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCccc
Confidence 2111111 122233333444333222 11245667999999999999974
No 160
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.97 E-value=4.2e-30 Score=268.15 Aligned_cols=181 Identities=22% Similarity=0.310 Sum_probs=147.4
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc--------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA-------- 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~-------- 438 (602)
..+|...+.||+|+||.||+|+. .+|+.||+|++...... ......+.+|+.++..+.|+++..++....
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS-SSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccc-ccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 46799999999999999999986 57899999988654332 112345678999999888888776543110
Q ss_pred ----------------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccc
Q 047576 439 ----------------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTA 496 (602)
Q Consensus 439 ----------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a 496 (602)
....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 95 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 95 CKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp --CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 1134789999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCC----CCcccccccccccccccccc-CcCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 497 RLLHADS----SNQTLLAGSYGYIAPELAYT-MVMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 497 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
+...... .......||+.|+|||++.+ ..++.++||||+||++|||+||+.||...
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 232 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 232 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCC
Confidence 8764321 12233568999999999876 45799999999999999999999999754
No 161
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.97 E-value=6.2e-31 Score=266.49 Aligned_cols=222 Identities=19% Similarity=0.302 Sum_probs=155.9
Q ss_pred CccccCcccccccccccceeeecC--CC--cEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP--NG--RVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND------ 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~--~g--~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~------ 437 (602)
.++|...+.||+|+||.||+|++. ++ ..||||+++..........+.+.+|+.++..+.|+++..++...
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK 96 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCE
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCce
Confidence 568999999999999999999752 33 36899999765443344567888999999777776665543311
Q ss_pred ----------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 438 ----------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 438 ----------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 01244889999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCC---ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCC
Q 047576 502 DSSN---QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPV 577 (602)
Q Consensus 502 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 577 (602)
.... .....++..|+|||++.+..++.++||||||+++|+|++ |+.||..... ......+.......+.
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~ 246 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-------SQILHKIDKEGERLPR 246 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTSCCCCCC
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-------HHHHHHHHccCCCCCC
Confidence 3221 222457788999999998889999999999999999999 9999975321 1222222222222221
Q ss_pred ChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 578 DRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 578 ~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
... ....+.+++..||+.||++
T Consensus 247 ~~~---~~~~l~~li~~~l~~~p~~ 268 (291)
T 1u46_A 247 PED---CPQDIYNVMVQCWAHKPED 268 (291)
T ss_dssp CTT---CCHHHHHHHHHHTCSSGGG
T ss_pred CcC---cCHHHHHHHHHHccCCccc
Confidence 111 2344889999999999974
No 162
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.97 E-value=1.1e-30 Score=270.68 Aligned_cols=219 Identities=23% Similarity=0.322 Sum_probs=159.3
Q ss_pred CccccCcccccccccccceeeec--------CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh-hcC----------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL--------PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM-ERG---------- 428 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~--------~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l-~~g---------- 428 (602)
.++|...+.||+|+||.||+|+. .+++.||+|++...... ...+.+.+|+.++..+ .|+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcH--HHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 46788999999999999999975 35778999999755432 2356778888888555 444
Q ss_pred ---------------ccccccccccc-------------hhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCe
Q 047576 429 ---------------SLFRILHNDAE-------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNI 480 (602)
Q Consensus 429 ---------------sL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NI 480 (602)
+|.+++..... ...+++.++..++.|++.||+||| +.+|+||||||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NI 188 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV 188 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGE
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceE
Confidence 44444433211 123789999999999999999999 78999999999999
Q ss_pred eeCCCCcceeecccccccccCCCC--CccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCccccc
Q 047576 481 LLNSKLEAFVADFGTARLLHADSS--NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSS 557 (602)
Q Consensus 481 Lld~~~~~kL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~ 557 (602)
+++.++.+||+|||++........ ......+++.|+|||++.+..++.++||||||+++|||+| |+.||.....
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--- 265 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--- 265 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH---
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH---
Confidence 999999999999999987654321 1222356788999999998889999999999999999999 9999975321
Q ss_pred CCCcccchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 558 SYDPKIMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 558 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.. +...+......+.... ....+.+++..||+.||++
T Consensus 266 ----~~-~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~ 302 (334)
T 2pvf_A 266 ----EE-LFKLLKEGHRMDKPAN---CTNELYMMMRDCWHAVPSQ 302 (334)
T ss_dssp ----HH-HHHHHHHTCCCCCCTT---CCHHHHHHHHHHTCSSGGG
T ss_pred ----HH-HHHHHhcCCCCCCCcc---CCHHHHHHHHHHccCChhh
Confidence 11 1111111111111111 2234788999999999964
No 163
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.96 E-value=3.5e-31 Score=273.80 Aligned_cols=219 Identities=23% Similarity=0.349 Sum_probs=156.8
Q ss_pred CccccCcccccccccccceeeecC-CCcE----EeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc-----
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRV----FALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND----- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~----vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~----- 437 (602)
.++|...+.||+|+||.||+|+.. +++. ||+|.+...... ...+.+.+|+.++..+.|+++..++...
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 91 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP--KANKEILDEAYVMASVDNPHVCRLLGICLTSTV 91 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSC--CCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCH--HHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCc
Confidence 567999999999999999999853 4554 477766543221 2346788899999777777666544311
Q ss_pred -----------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 438 -----------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 438 -----------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
.....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 92 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred eEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 01234789999999999999999999 7899999999999999999999999999998764
Q ss_pred CCCCC--ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCC
Q 047576 501 ADSSN--QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPV 577 (602)
Q Consensus 501 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 577 (602)
..... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||+.... ..+...+......+.
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--------~~~~~~~~~~~~~~~ 240 (327)
T 3lzb_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--------SEISSILEKGERLPQ 240 (327)
T ss_dssp -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--------GGHHHHHHTTCCCCC
T ss_pred CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH--------HHHHHHHHcCCCCCC
Confidence 43221 223456788999999999999999999999999999999 9999975321 122333333322222
Q ss_pred ChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 578 DRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 578 ~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
... ....+.+++..||+.||++
T Consensus 241 ~~~---~~~~l~~li~~~l~~dp~~ 262 (327)
T 3lzb_A 241 PPI---CTIDVYMIMRKCWMIDADS 262 (327)
T ss_dssp CTT---BCHHHHHHHHHHTCSSGGG
T ss_pred Ccc---CCHHHHHHHHHHcCCChhH
Confidence 221 2334788999999999974
No 164
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.96 E-value=8.1e-31 Score=271.31 Aligned_cols=220 Identities=21% Similarity=0.306 Sum_probs=163.4
Q ss_pred CccccCcccccccccccceeeecC-C-----CcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh-hcCcccccccc----
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-N-----GRVFALKKLNSPETEELAFIRSFRNEAQVLSQM-ERGSLFRILHN---- 436 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~-----g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l-~~gsL~~~l~~---- 436 (602)
.++|...+.||+|+||.||+|+.. + +..||+|++...... ...+.+.+|+.++..+ .|+++..++..
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 122 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA--DEKEALMSELKIMSHLGQHENIVNLLGACTHG 122 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccCh--HHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence 467888999999999999999853 2 347999998765432 2346788899998777 66666554431
Q ss_pred ---------------------ccc-----------hhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCC
Q 047576 437 ---------------------DAE-----------AVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS 484 (602)
Q Consensus 437 ---------------------~~~-----------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~ 484 (602)
... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.
T Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTN 199 (333)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEG
T ss_pred CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECC
Confidence 100 123588899999999999999999 789999999999999999
Q ss_pred CCcceeecccccccccCCCCC--ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCc
Q 047576 485 KLEAFVADFGTARLLHADSSN--QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDP 561 (602)
Q Consensus 485 ~~~~kL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~ 561 (602)
++.+||+|||++......... .....+++.|+|||++.+..++.++||||||+++|||+| |..||.....
T Consensus 200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~------- 272 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV------- 272 (333)
T ss_dssp GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS-------
T ss_pred CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch-------
Confidence 999999999999876543322 223456789999999999899999999999999999999 9999974321
Q ss_pred ccchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 562 KIMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 562 ~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
...+..++......+.... ....+.+++..||+.||++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~~p~~ 310 (333)
T 2i1m_A 273 NSKFYKLVKDGYQMAQPAF---APKNIYSIMQACWALEPTH 310 (333)
T ss_dssp SHHHHHHHHHTCCCCCCTT---CCHHHHHHHHHHTCSSGGG
T ss_pred hHHHHHHHhcCCCCCCCCC---CCHHHHHHHHHHhccChhh
Confidence 1122233333222221111 2234788999999999974
No 165
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.96 E-value=2.6e-30 Score=259.79 Aligned_cols=218 Identities=22% Similarity=0.297 Sum_probs=161.6
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcc----------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSL---------------- 430 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL---------------- 430 (602)
.++|...+.||+|+||.||+|+.. +++.||+|++...... ...+.+.+|+.++..+.|+++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT--THHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch--hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 467889999999999999999865 7899999998644322 234567888888855555444
Q ss_pred ---------ccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 431 ---------FRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 431 ---------~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
.+++.. ...+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+.....
T Consensus 84 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 157 (276)
T 2yex_A 84 LEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (276)
T ss_dssp EECCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EEecCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence 443332 234889999999999999999999 78999999999999999999999999999986543
Q ss_pred CC--CCccccccccccccccccccCcC-CccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCC
Q 047576 502 DS--SNQTLLAGSYGYIAPELAYTMVM-TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVD 578 (602)
Q Consensus 502 ~~--~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 578 (602)
.. .......|++.|+|||++.+..+ +.++||||+|+++|||++|+.||+..... ..............+..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~ 231 (276)
T 2yex_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS------CQEYSDWKEKKTYLNPW 231 (276)
T ss_dssp TTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT------SHHHHHHHTTCTTSTTG
T ss_pred CcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH------HHHHHHhhhcccccCch
Confidence 22 12234568999999999987765 77899999999999999999999753221 11112222211111111
Q ss_pred hhhHHHHHHHHHHHhhccCcCCCC
Q 047576 579 RKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 579 ~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.. ....+.+++..|++.||++
T Consensus 232 ~~---~~~~~~~li~~~l~~~p~~ 252 (276)
T 2yex_A 232 KK---IDSAPLALLHKILVENPSA 252 (276)
T ss_dssp GG---SCHHHHHHHHHHSCSSTTT
T ss_pred hh---cCHHHHHHHHHHCCCCchh
Confidence 11 2234778999999999975
No 166
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.96 E-value=6.7e-31 Score=269.77 Aligned_cols=228 Identities=18% Similarity=0.252 Sum_probs=155.4
Q ss_pred CccccC-cccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHh-hhcCccccccccc-------
Q 047576 368 PRKIDS-KYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQ-MERGSLFRILHND------- 437 (602)
Q Consensus 368 t~~f~~-~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~-l~~gsL~~~l~~~------- 437 (602)
.+.|.. .+.||+|+||.||+|+. .+++.||||++...... ..+.+.+|+.++.. ..|+++..++...
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~ 87 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGH---IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY 87 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSC---CHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcch---hHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 345666 47899999999999986 47899999998654322 23567788887754 2354444433210
Q ss_pred ---------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCc---ceeecccccccc
Q 047576 438 ---------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLE---AFVADFGTARLL 499 (602)
Q Consensus 438 ---------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~---~kL~DFG~a~~~ 499 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||++...
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~ 164 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164 (316)
T ss_dssp EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred EEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence 01234789999999999999999999 789999999999999988776 999999998765
Q ss_pred cCCCC-------Ccccccccccccccccccc-----CcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcc-----
Q 047576 500 HADSS-------NQTLLAGSYGYIAPELAYT-----MVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPK----- 562 (602)
Q Consensus 500 ~~~~~-------~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~----- 562 (602)
..... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.........+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 244 (316)
T 2ac3_A 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244 (316)
T ss_dssp -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHH
T ss_pred ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchh
Confidence 42211 1122458999999999875 558899999999999999999999997643322222111
Q ss_pred ---cchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 563 ---IMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 563 ---~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.....+.+.....+. .........+.+++.+|++.||++
T Consensus 245 ~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~ 286 (316)
T 2ac3_A 245 CQNMLFESIQEGKYEFPD-KDWAHISCAAKDLISKLLVRDAKQ 286 (316)
T ss_dssp HHHHHHHHHHHCCCCCCH-HHHTTSCHHHHHHHHHHSCSSTTT
T ss_pred HHHHHHHHHhccCcccCc-hhcccCCHHHHHHHHHHhhCChhh
Confidence 112223333332221 100112345889999999999975
No 167
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=2.6e-30 Score=271.69 Aligned_cols=179 Identities=27% Similarity=0.372 Sum_probs=143.4
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc--------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA-------- 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~-------- 438 (602)
.++|.....||+|+||.||+|+. .+|+.||||++...... ....+.+.+|+.++..+.|+++..++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQS-ELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSS-HHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccC-HHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 46789999999999999999986 47999999998654332 234567889999999998888776543210
Q ss_pred ------------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 439 ------------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 439 ------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
....+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 103 ~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 103 TDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp CCCEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred ceEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 1234788899999999999999999 7899999999999999999999999999998764
Q ss_pred CCCCCcccccccccccccccccc-CcCCccchhHHHHHHHHHHHcCCCCCCCCc
Q 047576 501 ADSSNQTLLAGSYGYIAPELAYT-MVMTEKYDVYSFGVVTLEVLMGKHPRDLHS 553 (602)
Q Consensus 501 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~Pf~~~~ 553 (602)
.. .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 180 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 230 (367)
T 1cm8_A 180 SE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD 230 (367)
T ss_dssp SS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 32 233578999999999887 678999999999999999999999997543
No 168
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.96 E-value=1e-30 Score=265.48 Aligned_cols=218 Identities=20% Similarity=0.356 Sum_probs=156.2
Q ss_pred cccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccc-------------
Q 047576 370 KIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILH------------- 435 (602)
Q Consensus 370 ~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~------------- 435 (602)
.|.....||+|+||.||+|+. .+++.||+|++...... ..+.+.+|+.++..+.|+++..++.
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 99 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSR---YSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFME 99 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC------HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchH---HHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEE
Confidence 445556899999999999985 46889999998755432 3466888999987777666655432
Q ss_pred ------------cccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCC-CCcceeecccccccccCC
Q 047576 436 ------------NDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS-KLEAFVADFGTARLLHAD 502 (602)
Q Consensus 436 ------------~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~-~~~~kL~DFG~a~~~~~~ 502 (602)
.......+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||.+......
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~ 176 (295)
T 2clq_A 100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI 176 (295)
T ss_dssp CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-
T ss_pred eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCC
Confidence 1111223568888999999999999999 789999999999999987 899999999999876543
Q ss_pred CCCccccccccccccccccccCc--CCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChh
Q 047576 503 SSNQTLLAGSYGYIAPELAYTMV--MTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRK 580 (602)
Q Consensus 503 ~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 580 (602)
........|++.|+|||++.+.. ++.++||||||+++|+|++|+.||........... ........+.++...
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~~~~--- 251 (295)
T 2clq_A 177 NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF--KVGMFKVHPEIPESM--- 251 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHH--HHHHHCCCCCCCTTS---
T ss_pred CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHH--hhccccccccccccC---
Confidence 33334457899999999987654 78999999999999999999999964221100000 000001112222222
Q ss_pred hHHHHHHHHHHHhhccCcCCCC
Q 047576 581 VIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 581 ~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
...+.+++.+||+.||++
T Consensus 252 ----~~~~~~li~~~l~~dp~~ 269 (295)
T 2clq_A 252 ----SAEAKAFILKCFEPDPDK 269 (295)
T ss_dssp ----CHHHHHHHHHTTCSSTTT
T ss_pred ----CHHHHHHHHHHccCChhh
Confidence 234788999999999975
No 169
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.96 E-value=6.8e-31 Score=270.72 Aligned_cols=223 Identities=19% Similarity=0.239 Sum_probs=164.2
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHH---HHhhhhHhHHHHHHhhhcCccccccccc------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEEL---AFIRSFRNEAQVLSQMERGSLFRILHND------ 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~---~~~~~~~~E~~il~~l~~gsL~~~l~~~------ 437 (602)
.+.|...+.||+|+||.||+|+.. +|+.||+|++........ ...+.+.+|+.++..+.|+++..++...
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 467899999999999999999865 689999999865432210 1235678899988666665554433210
Q ss_pred ----------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCC----cceeecccccc
Q 047576 438 ----------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKL----EAFVADFGTAR 497 (602)
Q Consensus 438 ----------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~----~~kL~DFG~a~ 497 (602)
.....+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||++.
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 01234789999999999999999999 78999999999999999887 79999999998
Q ss_pred cccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCC
Q 047576 498 LLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPV 577 (602)
Q Consensus 498 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 577 (602)
...... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||..... ...+..+.......+.
T Consensus 168 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~i~~~~~~~~~ 239 (321)
T 2a2a_A 168 EIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-------QETLANITSVSYDFDE 239 (321)
T ss_dssp ECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHHHHHHHTTCCCCCH
T ss_pred ecCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhcccccCh
Confidence 765432 22345699999999999999999999999999999999999999974321 1122222222221110
Q ss_pred ChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 578 DRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 578 ~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.........+.+++..|++.||++
T Consensus 240 -~~~~~~~~~~~~li~~~l~~dp~~ 263 (321)
T 2a2a_A 240 -EFFSHTSELAKDFIRKLLVKETRK 263 (321)
T ss_dssp -HHHTTCCHHHHHHHHTTSCSSTTT
T ss_pred -hhhcccCHHHHHHHHHHcCCChhh
Confidence 000112234789999999999975
No 170
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.96 E-value=8.3e-31 Score=263.88 Aligned_cols=219 Identities=20% Similarity=0.283 Sum_probs=165.3
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|...+.||+|+||.||+|+.. ++..||+|++...... ..+.+.+|++++..+.|+++..++...
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc---hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 457889999999999999999865 5778999998654332 245688899999777777766544311
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeee---CCCCcceeecccccccccC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILL---NSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILl---d~~~~~kL~DFG~a~~~~~ 501 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||.+.....
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 85 MELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred EeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 01233789999999999999999999 7899999999999999 7889999999999987654
Q ss_pred CCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhh
Q 047576 502 DSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
.. ......||+.|+|||++.+. ++.++||||+|+++|+|++|+.||.... .......+.......+. ...
T Consensus 162 ~~-~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~-~~~ 231 (277)
T 3f3z_A 162 GK-MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPT-------DSEVMLKIREGTFTFPE-KDW 231 (277)
T ss_dssp TS-CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCCCH-HHH
T ss_pred cc-chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCC-------HHHHHHHHHhCCCCCCc-hhh
Confidence 33 23345799999999988654 8999999999999999999999997532 12222333333333221 110
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
......+.+++..|++.||++
T Consensus 232 ~~~~~~~~~li~~~l~~dp~~ 252 (277)
T 3f3z_A 232 LNVSPQAESLIRRLLTKSPKQ 252 (277)
T ss_dssp TTSCHHHHHHHHHHTCSSTTT
T ss_pred hcCCHHHHHHHHHHccCChhh
Confidence 112345889999999999975
No 171
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.96 E-value=6.7e-31 Score=270.50 Aligned_cols=224 Identities=19% Similarity=0.259 Sum_probs=163.5
Q ss_pred ccCcccccccccccceeeec-----CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc-------
Q 047576 371 IDSKYCIGTGAYGSVYKAQL-----PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA------- 438 (602)
Q Consensus 371 f~~~~~LG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~------- 438 (602)
|...+.||+|+||.||++++ .+++.||||++...... ...+.+.+|++++..+.|+++..++....
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 110 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGP--QHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASL 110 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCH--HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccCh--HHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceE
Confidence 48889999999999988753 26889999999765322 34567889999997776666555432110
Q ss_pred ----------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCC
Q 047576 439 ----------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD 502 (602)
Q Consensus 439 ----------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~ 502 (602)
....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 111 QLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 1123789999999999999999999 789999999999999999999999999999877543
Q ss_pred CC---CccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccc---cCCC----cccchhhhhccC
Q 047576 503 SS---NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLS---SSYD----PKIMLIDVLDQR 572 (602)
Q Consensus 503 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~---~~~~----~~~~~~~~~d~~ 572 (602)
.. ......++..|+|||++.+..++.++||||+|+++|+|+||+.||....... .... ....+.+.++..
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence 32 1223457888999999999899999999999999999999999986432110 0000 011123333333
Q ss_pred CCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 573 LPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 573 l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
...+.... ....+.+++..||+.||++
T Consensus 268 ~~~~~~~~---~~~~l~~li~~~l~~dP~~ 294 (318)
T 3lxp_A 268 ERLPRPDK---CPAEVYHLMKNCWETEASF 294 (318)
T ss_dssp CCCCCCTT---CCHHHHHHHHHHTCSSGGG
T ss_pred cCCCCCcc---ccHHHHHHHHHHcCCCccc
Confidence 33222222 3345889999999999974
No 172
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=9.6e-31 Score=272.65 Aligned_cols=182 Identities=23% Similarity=0.328 Sum_probs=143.5
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHH--HHHhhhhHhHHHHHHhhhcCcccccccccc------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEE--LAFIRSFRNEAQVLSQMERGSLFRILHNDA------ 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~--~~~~~~~~~E~~il~~l~~gsL~~~l~~~~------ 438 (602)
.++|.....||+|+||.||+|+.. +|+.||||++....... ....+.+.+|+.++..+.|+++..++....
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 467999999999999999999875 68999999987543221 123456788999998888888776654210
Q ss_pred ----------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCC
Q 047576 439 ----------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD 502 (602)
Q Consensus 439 ----------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~ 502 (602)
....+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 89 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 89 LVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp EEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred EEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 1123778899999999999999999 789999999999999999999999999999877554
Q ss_pred CCCccccccccccccccccccC-cCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 503 SSNQTLLAGSYGYIAPELAYTM-VMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 503 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
........||+.|+|||++.+. .++.++||||+||++|||++|..||...
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~ 216 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD 216 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 4444456789999999998764 4889999999999999999999999754
No 173
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.96 E-value=2.1e-30 Score=277.28 Aligned_cols=174 Identities=28% Similarity=0.376 Sum_probs=143.1
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
..+|...+.||+|+||.||+|+.. +|+.||||++.... ....+|++++..+.|.++..++...
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~ 125 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDE 125 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcc
Confidence 457899999999999999999874 68999999986432 2345799999999998887653211
Q ss_pred ----------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCC-Ccceeeccc
Q 047576 438 ----------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSK-LEAFVADFG 494 (602)
Q Consensus 438 ----------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~-~~~kL~DFG 494 (602)
.....+++..+..++.||++||+||| +.+|+||||||+|||++.+ +.+||+|||
T Consensus 126 ~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 126 VYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred eeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccch
Confidence 01234788889999999999999999 8899999999999999965 578999999
Q ss_pred ccccccCCCCCccccccccccccccccccC-cCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 495 TARLLHADSSNQTLLAGSYGYIAPELAYTM-VMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 495 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 203 ~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~ 260 (420)
T 1j1b_A 203 SAKQLVRGEP-NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260 (420)
T ss_dssp TCEECCTTCC-CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hhhhcccCCC-ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 9987644322 2335789999999998765 6899999999999999999999999754
No 174
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.96 E-value=9.1e-31 Score=265.01 Aligned_cols=217 Identities=25% Similarity=0.344 Sum_probs=165.2
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|.....||+|+||.||+|+.. ++..||+|++...... .+.+.+|+.++..+.|+++..++...
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTH----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHH----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 567889999999999999999875 4889999998765432 45678899988776666655443210
Q ss_pred ---------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCC
Q 047576 438 ---------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD 502 (602)
Q Consensus 438 ---------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~ 502 (602)
.....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+......
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 164 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164 (288)
T ss_dssp EECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred EEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence 01234889999999999999999999 779999999999999999999999999999876543
Q ss_pred CCC-ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCChh
Q 047576 503 SSN-QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRK 580 (602)
Q Consensus 503 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 580 (602)
... .....+++.|+|||++.+..++.++||||+|+++|+|++ |+.||..... ....+.+......+....
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~ 236 (288)
T 3kfa_A 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--------SQVYELLEKDYRMERPEG 236 (288)
T ss_dssp SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--------GGHHHHHHTTCCCCCCTT
T ss_pred ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHhccCCCCCCCC
Confidence 322 222456788999999999999999999999999999999 9999975321 112222322222222111
Q ss_pred hHHHHHHHHHHHhhccCcCCCC
Q 047576 581 VIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 581 ~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++..|++.||++
T Consensus 237 ---~~~~l~~li~~~l~~dp~~ 255 (288)
T 3kfa_A 237 ---CPEKVYELMRACWQWNPSD 255 (288)
T ss_dssp ---CCHHHHHHHHHHTCSSGGG
T ss_pred ---CCHHHHHHHHHHhCCChhh
Confidence 2344889999999999974
No 175
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=1.4e-30 Score=263.81 Aligned_cols=218 Identities=21% Similarity=0.291 Sum_probs=161.7
Q ss_pred ccccCcc-cccccccccceeeecC---CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc-------
Q 047576 369 RKIDSKY-CIGTGAYGSVYKAQLP---NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND------- 437 (602)
Q Consensus 369 ~~f~~~~-~LG~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~------- 437 (602)
++|.... .||+|+||.||+|... +++.||+|+++..... ...+.+.+|+.++..+.|+++..++...
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~l 86 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK--ADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALML 86 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCH--HHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEE
Confidence 4565555 8999999999999753 6788999999765322 3456788999998776666655443210
Q ss_pred ---------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCC
Q 047576 438 ---------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD 502 (602)
Q Consensus 438 ---------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~ 502 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 163 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163 (287)
T ss_dssp EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence 01234889999999999999999999 789999999999999999999999999999876543
Q ss_pred CCC---ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCC
Q 047576 503 SSN---QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVD 578 (602)
Q Consensus 503 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 578 (602)
... .....+++.|+|||++.+..++.++||||||+++|||+| |+.||..... .. ....+......+..
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-------~~-~~~~i~~~~~~~~~ 235 (287)
T 1u59_A 164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-------PE-VMAFIEQGKRMECP 235 (287)
T ss_dssp SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT-------HH-HHHHHHTTCCCCCC
T ss_pred cceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-------HH-HHHHHhcCCcCCCC
Confidence 221 122346789999999988889999999999999999999 9999975321 11 11122111111111
Q ss_pred hhhHHHHHHHHHHHhhccCcCCCC
Q 047576 579 RKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 579 ~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.. ....+.+++..||+.||++
T Consensus 236 ~~---~~~~l~~li~~~l~~~p~~ 256 (287)
T 1u59_A 236 PE---CPPELYALMSDCWIYKWED 256 (287)
T ss_dssp TT---CCHHHHHHHHHTTCSSGGG
T ss_pred CC---cCHHHHHHHHHHcCCChhh
Confidence 11 2334889999999999974
No 176
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.96 E-value=3.9e-31 Score=269.61 Aligned_cols=227 Identities=19% Similarity=0.272 Sum_probs=161.9
Q ss_pred CccccCcccccccccccceeee-----cCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc-----
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQ-----LPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND----- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~-----~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~----- 437 (602)
.+.|...+.||+|+||.||+|+ ..+++.||+|++...... ...+.+.+|+.++..+.|+++..++...
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 97 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG--NHIADLKKEIEILRNLYHENIVKYKGICTEDGG 97 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccc--hhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 3468888999999999999998 346899999998754322 2346678899988666665554433210
Q ss_pred --------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccc
Q 047576 438 --------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTAR 497 (602)
Q Consensus 438 --------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~ 497 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred ceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECcccccc
Confidence 01234789999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCC---CccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCccc----ccCCCc---ccchhh
Q 047576 498 LLHADSS---NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTL----SSSYDP---KIMLID 567 (602)
Q Consensus 498 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~----~~~~~~---~~~~~~ 567 (602)
....... ......||..|+|||++.+..++.++||||+|+++|+|+||+.|+...... ...... ......
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH
Confidence 7754432 122346788899999999999999999999999999999999997532110 000111 111122
Q ss_pred hhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 568 VLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 568 ~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.+......+.... ....+.+++.+||+.||++
T Consensus 255 ~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~ 286 (302)
T 4e5w_A 255 TLKEGKRLPCPPN---CPDEVYQLMRKCWEFQPSN 286 (302)
T ss_dssp HHHTTCCCCCCTT---CCHHHHHHHHHTTCSSGGG
T ss_pred HHhccCCCCCCCC---CCHHHHHHHHHHcCCCCCC
Confidence 2222222211111 2344889999999999974
No 177
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.96 E-value=7.7e-31 Score=271.16 Aligned_cols=219 Identities=20% Similarity=0.279 Sum_probs=157.0
Q ss_pred cccCc-ccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHH-------------------------
Q 047576 370 KIDSK-YCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVL------------------------- 422 (602)
Q Consensus 370 ~f~~~-~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il------------------------- 422 (602)
.|... +.||+|+||.||+|+.. +++.||+|++....... .....+.+|+.++
T Consensus 29 ~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv 107 (327)
T 3lm5_A 29 FYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ-DCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILI 107 (327)
T ss_dssp HEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTE-ECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred EEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcch-HHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEE
Confidence 44444 78999999999999865 68999999987543321 1234566777776
Q ss_pred -HhhhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCC---CCcceeeccccccc
Q 047576 423 -SQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS---KLEAFVADFGTARL 498 (602)
Q Consensus 423 -~~l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~---~~~~kL~DFG~a~~ 498 (602)
||+++|+|.+++... ....+++.++..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||++..
T Consensus 108 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~ 183 (327)
T 3lm5_A 108 LEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK 183 (327)
T ss_dssp EECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEE
T ss_pred EEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCccccc
Confidence 444555666555432 1345899999999999999999999 789999999999999988 78999999999987
Q ss_pred ccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCC
Q 047576 499 LHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVD 578 (602)
Q Consensus 499 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 578 (602)
...... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||..... ......+.......+..
T Consensus 184 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~~~~~~~ 255 (327)
T 3lm5_A 184 IGHACE-LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN-------QETYLNISQVNVDYSEE 255 (327)
T ss_dssp C----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCCCCCTT
T ss_pred cCCccc-cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-------hHHHHHHHhcccccCch
Confidence 654322 2335799999999999999999999999999999999999999975322 11112222222111110
Q ss_pred hhhHHHHHHHHHHHhhccCcCCCC
Q 047576 579 RKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 579 ~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
........+.+++..|++.||++
T Consensus 256 -~~~~~~~~~~~li~~~L~~dP~~ 278 (327)
T 3lm5_A 256 -TFSSVSQLATDFIQSLLVKNPEK 278 (327)
T ss_dssp -TTTTSCHHHHHHHHHHSCSSGGG
T ss_pred -hhcccCHHHHHHHHHHcCCChhh
Confidence 00112334789999999999974
No 178
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.96 E-value=1.2e-30 Score=263.48 Aligned_cols=219 Identities=23% Similarity=0.303 Sum_probs=160.5
Q ss_pred CccccCcccccccccccceeeecC----CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP----NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND------ 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~------ 437 (602)
.++|...+.||+|+||.||+|+.. ++..||+|++...... ...+.+.+|+.++..+.|+++..++...
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 88 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTL--DNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTW 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCH--HHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCc--hHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCE
Confidence 568999999999999999999753 2446999998765322 2356788999999777776665543311
Q ss_pred ----------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 438 ----------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 438 ----------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
.....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+.....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 01234788999999999999999999 78999999999999999999999999999987654
Q ss_pred CCC-CccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCCh
Q 047576 502 DSS-NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDR 579 (602)
Q Consensus 502 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 579 (602)
... ......+++.|+|||++.+..++.++||||||+++|||+| |+.||..... ... ...+......+...
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~-------~~~-~~~~~~~~~~~~~~ 237 (281)
T 3cc6_A 166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN-------KDV-IGVLEKGDRLPKPD 237 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG-------GGH-HHHHHHTCCCCCCT
T ss_pred ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh-------HHH-HHHHhcCCCCCCCC
Confidence 322 1233457789999999998899999999999999999998 9999974321 111 11111111111111
Q ss_pred hhHHHHHHHHHHHhhccCcCCCC
Q 047576 580 KVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 580 ~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
. ....+.+++.+||+.||++
T Consensus 238 ~---~~~~l~~li~~~l~~~p~~ 257 (281)
T 3cc6_A 238 L---CPPVLYTLMTRCWDYDPSD 257 (281)
T ss_dssp T---CCHHHHHHHHHHTCSSGGG
T ss_pred C---CCHHHHHHHHHHccCCchh
Confidence 1 2234889999999999974
No 179
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.96 E-value=3.7e-30 Score=271.94 Aligned_cols=176 Identities=23% Similarity=0.328 Sum_probs=140.2
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhc-------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER------------------- 427 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~------------------- 427 (602)
.++|.....||+|+||.||+|+.. +++.||||+++.... ....+..|+.+++.+.+
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKA----FLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHH----HHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHH----HHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 568999999999999999999864 688999999975432 23456667776655432
Q ss_pred -----------CccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeC--CCCcceeeccc
Q 047576 428 -----------GSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLN--SKLEAFVADFG 494 (602)
Q Consensus 428 -----------gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld--~~~~~kL~DFG 494 (602)
++|.+++... ....+++..+..++.|++.||.|||.+ ..+|+||||||+|||++ .++.+||+|||
T Consensus 129 ~~~~lv~e~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 129 NHLCLVFEMLSYNLYDLLRNT-NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp TEEEEEEECCCCBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred CceEEEEecCCCCHHHHHhhc-CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 2233333221 113478999999999999999999943 57999999999999994 57889999999
Q ss_pred ccccccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 495 TARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 495 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 207 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 207 SSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred Cceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99876432 23357899999999999999999999999999999999999999854
No 180
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.96 E-value=7.6e-31 Score=262.43 Aligned_cols=217 Identities=24% Similarity=0.323 Sum_probs=162.1
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc----------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND---------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~---------- 437 (602)
.++|...+.||+|+||.||+|+..+++.||+|++...... .+.+.+|++++..+.|+++..++...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT 82 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence 4678889999999999999999888899999999765433 24678899988666655554433210
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCC-
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS- 503 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~- 503 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+.......
T Consensus 83 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 159 (267)
T 3t9t_A 83 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159 (267)
T ss_dssp CCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred eCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEcccccccccccccc
Confidence 01234789999999999999999999 7899999999999999999999999999998654321
Q ss_pred CCccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhH
Q 047576 504 SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVI 582 (602)
Q Consensus 504 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 582 (602)
.......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||..... ......+... ........
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~~~~~i~~~-~~~~~~~~-- 229 (267)
T 3t9t_A 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-------SEVVEDISTG-FRLYKPRL-- 229 (267)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTT-CCCCCCTT--
T ss_pred cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-------HHHHHHHhcC-CcCCCCcc--
Confidence 11122456788999999998889999999999999999999 8999975321 1111222211 11111111
Q ss_pred HHHHHHHHHHhhccCcCCCC
Q 047576 583 QDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 583 ~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++..||+.||++
T Consensus 230 -~~~~l~~li~~~l~~~p~~ 248 (267)
T 3t9t_A 230 -ASTHVYQIMNHCWRERPED 248 (267)
T ss_dssp -SCHHHHHHHHHHTCSSGGG
T ss_pred -CcHHHHHHHHHHccCChhh
Confidence 2234788999999999974
No 181
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.96 E-value=1.5e-30 Score=265.60 Aligned_cols=216 Identities=26% Similarity=0.380 Sum_probs=165.4
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.+.|...+.||+|+||.||+|+. .+++.||+|++...... ...+.+.+|+.++..+.|+++..++...
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 98 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 98 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS--TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH--HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 45688899999999999999975 47899999998654322 2346788899988766666655443211
Q ss_pred ------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCC
Q 047576 438 ------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 505 (602)
Q Consensus 438 ------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~ 505 (602)
.....+++.++..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||.+.........
T Consensus 99 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 175 (303)
T 3a7i_A 99 MEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175 (303)
T ss_dssp EECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC
T ss_pred EEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccccc
Confidence 01234789999999999999999999 789999999999999999999999999999877554434
Q ss_pred ccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhc---cCCCCCCChhhH
Q 047576 506 QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLD---QRLPPPVDRKVI 582 (602)
Q Consensus 506 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d---~~l~~~~~~~~~ 582 (602)
.....|++.|+|||++.+..++.++||||||+++|+|++|+.||...... .....+.. +.++...
T Consensus 176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~----- 243 (303)
T 3a7i_A 176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-------KVLFLIPKNNPPTLEGNY----- 243 (303)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHSCCCCCCSSC-----
T ss_pred cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH-------HHHHHhhcCCCCCCcccc-----
Confidence 44567899999999999999999999999999999999999999753221 11111111 1122222
Q ss_pred HHHHHHHHHHhhccCcCCCC
Q 047576 583 QDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 583 ~~~~~l~~l~~~Cl~~dP~e 602 (602)
...+.+++..||+.||++
T Consensus 244 --~~~l~~li~~~l~~dp~~ 261 (303)
T 3a7i_A 244 --SKPLKEFVEACLNKEPSF 261 (303)
T ss_dssp --CHHHHHHHHHHCCSSGGG
T ss_pred --CHHHHHHHHHHcCCChhh
Confidence 233789999999999974
No 182
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.96 E-value=1.6e-30 Score=273.22 Aligned_cols=179 Identities=26% Similarity=0.396 Sum_probs=135.5
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc--------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA-------- 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~-------- 438 (602)
.++|.....||+|+||.||+|+. .+|+.||||++...... ....+.+.+|+.++..+.|+++..++....
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSS-HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 46789999999999999999985 57899999998754322 224567889999999998888776553210
Q ss_pred ------------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 439 ------------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 439 ------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
....+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 107 ~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 107 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CCCEEEEECCCEECC-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred CeEEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 1234789999999999999999999 7899999999999999999999999999998754
Q ss_pred CCCCCcccccccccccccccccc-CcCCccchhHHHHHHHHHHHcCCCCCCCCc
Q 047576 501 ADSSNQTLLAGSYGYIAPELAYT-MVMTEKYDVYSFGVVTLEVLMGKHPRDLHS 553 (602)
Q Consensus 501 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~Pf~~~~ 553 (602)
.. .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 184 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 234 (367)
T 2fst_X 184 DE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234 (367)
T ss_dssp ----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 32 233578999999999887 678999999999999999999999997643
No 183
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.96 E-value=1.6e-30 Score=269.13 Aligned_cols=182 Identities=26% Similarity=0.346 Sum_probs=144.5
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc--------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA-------- 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~-------- 438 (602)
.++|.....||+|+||.||+|+.. +|+.||+|++...... ....+.+.+|+.++..+.|+++..++....
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDD-KMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCc-hHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 467899999999999999999875 5899999988654332 223466788999998888888777654210
Q ss_pred --------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC
Q 047576 439 --------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS 504 (602)
Q Consensus 439 --------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~ 504 (602)
....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 103 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp EECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred EecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 1234788999999999999999999 78999999999999999999999999999987655444
Q ss_pred CccccccccccccccccccC-cCCccchhHHHHHHHHHHHcCCCCCCCCc
Q 047576 505 NQTLLAGSYGYIAPELAYTM-VMTEKYDVYSFGVVTLEVLMGKHPRDLHS 553 (602)
Q Consensus 505 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~Pf~~~~ 553 (602)
......|++.|+|||++.+. .++.++||||+||++|+|++|+.||....
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 229 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS 229 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 44446789999999998875 68999999999999999999999997543
No 184
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.96 E-value=3.9e-31 Score=266.44 Aligned_cols=220 Identities=24% Similarity=0.338 Sum_probs=163.5
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|.....||+|+||.||+|+.. +++.||+|++...... ....+.+.+|+.++..+.|+++..++...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 468999999999999999999864 7899999998754332 12356788999999777777766654311
Q ss_pred ------------------c-chhhhcHHHHHHHHHHHHHHHHHhhhcCCCC-----eEEeCCCCCCeeeCCCCcceeecc
Q 047576 438 ------------------A-EAVELDWAKRVNIVKAMAHALAYLHHDCSPS-----VVHRDISSNNILLNSKLEAFVADF 493 (602)
Q Consensus 438 ------------------~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-----ivH~DLkp~NILld~~~~~kL~DF 493 (602)
. ....+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.+||+||
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 0 0112789999999999999999999 556 999999999999999999999999
Q ss_pred cccccccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCC
Q 047576 494 GTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRL 573 (602)
Q Consensus 494 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l 573 (602)
|.+..............|++.|+|||++.+..++.++||||||+++|+|+||+.||..... ......+.+...
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~i~~~~~ 233 (279)
T 2w5a_A 161 GLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-------KELAGKIREGKF 233 (279)
T ss_dssp CHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCC
T ss_pred chheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH-------HHHHHHHhhccc
Confidence 9998765433223345689999999999998899999999999999999999999975321 111122222222
Q ss_pred CCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 574 PPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 574 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
+ ..... ....+.+++.+||+.||++
T Consensus 234 ~-~~~~~---~~~~l~~li~~~l~~~p~~ 258 (279)
T 2w5a_A 234 R-RIPYR---YSDELNEIITRMLNLKDYH 258 (279)
T ss_dssp C-CCCTT---SCHHHHHHHHHHTCSSGGG
T ss_pred c-cCCcc---cCHHHHHHHHHHcCCCccc
Confidence 1 11111 2234789999999999974
No 185
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=4.1e-30 Score=268.57 Aligned_cols=252 Identities=23% Similarity=0.261 Sum_probs=191.3
Q ss_pred CCCCCCCCCceeCCCCCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCc
Q 047576 87 DSDHCEWIGITCNSAGSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNR 166 (602)
Q Consensus 87 ~~~~C~w~gv~C~~~~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~ 166 (602)
...+|.|.|+ |+..+ +.++.+..+..++|+.|++. ++++.+..+..|.++++|++|+|++|+
T Consensus 26 ~~~~C~~~~~-c~~~~---------------~~l~~iP~~~~~~L~~L~l~--~n~i~~~~~~~~~~l~~L~~L~L~~n~ 87 (353)
T 2z80_A 26 ASLSCDRNGI-CKGSS---------------GSLNSIPSGLTEAVKSLDLS--NNRITYISNSDLQRCVNLQALVLTSNG 87 (353)
T ss_dssp -CCEECTTSE-EECCS---------------TTCSSCCTTCCTTCCEEECT--TSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred cCCCCCCCeE-eeCCC---------------CCcccccccccccCcEEECC--CCcCcccCHHHhccCCCCCEEECCCCc
Confidence 3578999998 86321 12333333444677777776 455555445578888888888888888
Q ss_pred Ccc-------cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCc-ccccCcCCCceeecccc-cCCCC-c
Q 047576 167 LRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIP-LTLSRLTSLKILILAQN-QLSGL-P 236 (602)
Q Consensus 167 i~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N-~l~~i-p 236 (602)
|++ .+++|++|+|++|++++..+..|+++++|++|+|++|++++..+ ..+.++++|++|++++| .++++ |
T Consensus 88 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 167 (353)
T 2z80_A 88 INTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQR 167 (353)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT
T ss_pred cCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCH
Confidence 873 36788888888888887766678888888888888888885444 47888888888888888 46664 5
Q ss_pred ccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCC----------
Q 047576 237 QEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGK---------- 306 (602)
Q Consensus 237 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---------- 306 (602)
..++++++|++|++++|++++..|..+..+++|++|++++|.++...+..+..+++|+.|+|++|++++.
T Consensus 168 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~ 247 (353)
T 2z80_A 168 KDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGET 247 (353)
T ss_dssp TTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------C
T ss_pred HHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccc
Confidence 6788888888888888888888888888888888888888888644444455678888888888888764
Q ss_pred ---------------------CCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccC
Q 047576 307 ---------------------IPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVP 356 (602)
Q Consensus 307 ---------------------~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 356 (602)
+|..+..+++|+.|++++|+++...+..+..+++|+.|++++|++++..|
T Consensus 248 ~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 248 NSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 34456678899999999999984433345889999999999999988766
No 186
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.96 E-value=6.3e-31 Score=270.73 Aligned_cols=219 Identities=24% Similarity=0.312 Sum_probs=161.7
Q ss_pred CccccCcccccccccccceeeecC------CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccc----------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP------NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLF---------- 431 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~---------- 431 (602)
.++|...+.||+|+||.||+|+.. +++.||+|++...... .....+.+|+.++..+.|+++.
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 101 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM--RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 101 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCH--HHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCH--HHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC
Confidence 467999999999999999999753 4788999999755432 2345688899988555554444
Q ss_pred ---------------cccccccch-------hhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcce
Q 047576 432 ---------------RILHNDAEA-------VELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAF 489 (602)
Q Consensus 432 ---------------~~l~~~~~~-------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~k 489 (602)
+++...... ..+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+|
T Consensus 102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~~k 178 (322)
T 1p4o_A 102 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVK 178 (322)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEE
T ss_pred ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCCeEE
Confidence 433321110 23588899999999999999999 78999999999999999999999
Q ss_pred eecccccccccCCCCC--ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchh
Q 047576 490 VADFGTARLLHADSSN--QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLI 566 (602)
Q Consensus 490 L~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~ 566 (602)
|+|||++......... .....+++.|+|||++.+..++.++||||+|+++|+|+| |+.||..... .....
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------~~~~~ 251 (322)
T 1p4o_A 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-------EQVLR 251 (322)
T ss_dssp ECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-------HHHHH
T ss_pred ECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-------HHHHH
Confidence 9999999866433221 122356889999999999899999999999999999999 8999974321 12222
Q ss_pred hhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 567 DVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 567 ~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.+.+....... .. ....+.+++.+||+.||++
T Consensus 252 ~~~~~~~~~~~-~~---~~~~l~~li~~~l~~dp~~ 283 (322)
T 1p4o_A 252 FVMEGGLLDKP-DN---CPDMLFELMRMCWQYNPKM 283 (322)
T ss_dssp HHHTTCCCCCC-TT---CCHHHHHHHHHHTCSSGGG
T ss_pred HHHcCCcCCCC-CC---CCHHHHHHHHHHcCCCccc
Confidence 23332222111 11 2334788999999999974
No 187
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.96 E-value=3.1e-29 Score=270.71 Aligned_cols=274 Identities=22% Similarity=0.275 Sum_probs=222.7
Q ss_pred CCCCCCCCC--ceeCCC---------CCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCC-ccCCCC
Q 047576 87 DSDHCEWIG--ITCNSA---------GSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIP-SEISAL 154 (602)
Q Consensus 87 ~~~~C~w~g--v~C~~~---------~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip-~~l~~L 154 (602)
....|.|.+ |.|+.. .+++.|+++...+. .+..-.++.+++|+.|++. .+.+.+.++ ..|.++
T Consensus 4 ~~~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~---~~~~~~~~~l~~L~~L~L~--~n~~~~~i~~~~~~~l 78 (455)
T 3v47_A 4 GTSECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIA---ELNETSFSRLQDLQFLKVE--QQTPGLVIRNNTFRGL 78 (455)
T ss_dssp ---CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCC---EECTTTTSSCTTCCEEECC--CCSTTCEECTTTTTTC
T ss_pred ccceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccC---cCChhHhccCccccEEECc--CCcccceECccccccc
Confidence 345566655 778632 35788888755432 3334457778888888876 556666664 579999
Q ss_pred CCCCEEECcCCcCcc-------cCCCcCEEECcCCcCCCCCchh--hhCCCCCCEEEecCCCCCCCCccc-ccCcCCCce
Q 047576 155 SKLQLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQE--IGNLKNLIELDVGDNSLIGPIPLT-LSRLTSLKI 224 (602)
Q Consensus 155 ~~L~~L~Ls~N~i~~-------~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~ 224 (602)
++|++|+|++|++.+ .+++|++|+|++|++++..|.. |+++++|++|+|++|++++..|.. +.++++|++
T Consensus 79 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~ 158 (455)
T 3v47_A 79 SSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHV 158 (455)
T ss_dssp TTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCE
T ss_pred ccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccE
Confidence 999999999999873 4789999999999999866665 999999999999999999888876 889999999
Q ss_pred eecccccCCC-CcccccCC----------------------------------CCCcEEEccCCCCCCCCCCccC-----
Q 047576 225 LILAQNQLSG-LPQEIGNL----------------------------------KNLMLLDVGNNDIIGPIPSTLG----- 264 (602)
Q Consensus 225 L~L~~N~l~~-ip~~~~~l----------------------------------~~L~~L~L~~N~l~~~~p~~l~----- 264 (602)
|++++|++++ .|..+.++ ++|+.|++++|++++.+|..+.
T Consensus 159 L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~ 238 (455)
T 3v47_A 159 LDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAG 238 (455)
T ss_dssp EECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTT
T ss_pred EeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccc
Confidence 9999999998 45555443 6788888888888764443221
Q ss_pred ----------------------------------CCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcc
Q 047576 265 ----------------------------------LFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQ 310 (602)
Q Consensus 265 ----------------------------------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 310 (602)
..++|++|++++|.+++.+|..++.+++|++|+|++|++++..|..
T Consensus 239 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 318 (455)
T 3v47_A 239 TKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNA 318 (455)
T ss_dssp CCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTT
T ss_pred cceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhH
Confidence 1258999999999999999999999999999999999999988999
Q ss_pred cCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccCCCCCcCCCC
Q 047576 311 IASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYSNKHLSSM 365 (602)
Q Consensus 311 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~l 365 (602)
+..+++|+.|+|++|++++..|..+..+++|+.|++++|++++..|..+..+..+
T Consensus 319 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 373 (455)
T 3v47_A 319 FWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNL 373 (455)
T ss_dssp TTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred hcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccc
Confidence 9999999999999999998889999999999999999999999988877555444
No 188
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.96 E-value=1.1e-30 Score=261.59 Aligned_cols=214 Identities=19% Similarity=0.274 Sum_probs=158.3
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhh---------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME--------------------- 426 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~--------------------- 426 (602)
.++|.....||+|+||.||+|+. +++.||||++....... ...+.+.+|+.++..+.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWST-RKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCH-HHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCH-HHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 46788999999999999999998 48899999987654322 23456888888774444
Q ss_pred ------cCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCC--eEEeCCCCCCeeeCCCCcceeeccccccc
Q 047576 427 ------RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPS--VVHRDISSNNILLNSKLEAFVADFGTARL 498 (602)
Q Consensus 427 ------~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~DLkp~NILld~~~~~kL~DFG~a~~ 498 (602)
+|+|.+++.... ...+++.++..++.|++.||+||| +.+ |+||||||+||+++.++.++++|||++..
T Consensus 87 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EEECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred eecccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceee
Confidence 444444444321 224799999999999999999999 677 99999999999999999999999988765
Q ss_pred ccCCCCCccccccccccccccccccCcCCc---cchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCC
Q 047576 499 LHADSSNQTLLAGSYGYIAPELAYTMVMTE---KYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPP 575 (602)
Q Consensus 499 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~ 575 (602)
... ....||+.|+|||++.+..++. ++||||||+++|||+||+.||..... ......+......+
T Consensus 163 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~ 230 (271)
T 3kmu_A 163 FQS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN-------MEIGMKVALEGLRP 230 (271)
T ss_dssp TSC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH-------HHHHHHHHHSCCCC
T ss_pred ecc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh-------HHHHHHHHhcCCCC
Confidence 322 2246889999999998766544 79999999999999999999975322 11122222222222
Q ss_pred CCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 576 PVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 576 ~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
..... ....+.+++..||+.||++
T Consensus 231 ~~~~~---~~~~~~~li~~~l~~~p~~ 254 (271)
T 3kmu_A 231 TIPPG---ISPHVSKLMKICMNEDPAK 254 (271)
T ss_dssp CCCTT---CCHHHHHHHHHHTCSSGGG
T ss_pred CCCCC---CCHHHHHHHHHHcCCChhh
Confidence 22111 2234889999999999974
No 189
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=2.1e-30 Score=263.49 Aligned_cols=218 Identities=23% Similarity=0.300 Sum_probs=158.0
Q ss_pred cccCcccccccccccceeeecC----CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc--------
Q 047576 370 KIDSKYCIGTGAYGSVYKAQLP----NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND-------- 437 (602)
Q Consensus 370 ~f~~~~~LG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~-------- 437 (602)
.|...+.||+|+||.||+|+.. ++..||+|++...... ...+.+.+|+.++..+.|+++..++...
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 99 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEM--QQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH 99 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSH--HHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccH--HHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcE
Confidence 4666789999999999999753 2337999998754332 3456788999999776666655543211
Q ss_pred ----------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 438 ----------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 438 ----------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 100 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 176 (298)
T 3pls_A 100 VLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILD 176 (298)
T ss_dssp EEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred EEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence 01234788999999999999999999 78999999999999999999999999999976533
Q ss_pred CC----CCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCC
Q 047576 502 DS----SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPV 577 (602)
Q Consensus 502 ~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 577 (602)
.. .......+++.|+|||.+.+..++.++||||||+++|+|+||..|+.... . .......+......+.
T Consensus 177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~------~-~~~~~~~~~~~~~~~~ 249 (298)
T 3pls_A 177 REYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI------D-PFDLTHFLAQGRRLPQ 249 (298)
T ss_dssp GGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS------C-GGGHHHHHHTTCCCCC
T ss_pred CcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC------C-HHHHHHHhhcCCCCCC
Confidence 21 12233467889999999999999999999999999999999666643211 1 1111222222222111
Q ss_pred ChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 578 DRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 578 ~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
... ....+.+++..|++.||++
T Consensus 250 ~~~---~~~~l~~li~~~l~~~p~~ 271 (298)
T 3pls_A 250 PEY---CPDSLYQVMQQCWEADPAV 271 (298)
T ss_dssp CTT---CCHHHHHHHHHHTCSSGGG
T ss_pred Ccc---chHHHHHHHHHHccCChhh
Confidence 111 2234889999999999974
No 190
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.96 E-value=3.9e-30 Score=275.97 Aligned_cols=175 Identities=23% Similarity=0.307 Sum_probs=140.9
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcC------ccccccccc---
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERG------SLFRILHND--- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~g------sL~~~l~~~--- 437 (602)
..+|...+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|+.+++.+.+. ++..++...
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR----FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHH----HHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccc----hHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 457999999999999999999764 689999999976532 235566788877665332 333322110
Q ss_pred --------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCc--ceeecccc
Q 047576 438 --------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLE--AFVADFGT 495 (602)
Q Consensus 438 --------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~--~kL~DFG~ 495 (602)
.....+++..+..|+.||+.||+||| +.+|+||||||+|||++.++. +||+|||+
T Consensus 172 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 172 NHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp TEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred CeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 01123889999999999999999999 779999999999999999887 99999999
Q ss_pred cccccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 496 ARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 496 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
+...... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 249 a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 249 SCYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CEETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 9765432 22357899999999999999999999999999999999999999754
No 191
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.96 E-value=8.4e-30 Score=269.79 Aligned_cols=175 Identities=21% Similarity=0.304 Sum_probs=142.6
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhh--------cCccccccccc-
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME--------RGSLFRILHND- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~--------~gsL~~~l~~~- 437 (602)
.++|...+.||+|+||.||+|+. .+++.||||++..... ..+.+.+|+.++..+. +.++..++...
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~ 111 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEH----YTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK 111 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH----HHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCc----chHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence 36799999999999999999975 4689999999975532 3456778998887775 33344333210
Q ss_pred --------------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCC-CeEEeCCCCCCeeeCCCC----
Q 047576 438 --------------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSP-SVVHRDISSNNILLNSKL---- 486 (602)
Q Consensus 438 --------------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~ivH~DLkp~NILld~~~---- 486 (602)
.....+++.++..|+.||+.||+||| ++ +|+||||||+|||++.++
T Consensus 112 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~ 188 (397)
T 1wak_A 112 ISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIR 188 (397)
T ss_dssp EEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHH
T ss_pred ecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhh
Confidence 01134889999999999999999999 66 999999999999999775
Q ss_pred ---------------------------------------------cceeecccccccccCCCCCcccccccccccccccc
Q 047576 487 ---------------------------------------------EAFVADFGTARLLHADSSNQTLLAGSYGYIAPELA 521 (602)
Q Consensus 487 ---------------------------------------------~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~ 521 (602)
.+||+|||.+...... .....||+.|+|||++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHHH
T ss_pred hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChhh
Confidence 7999999999876433 2335789999999999
Q ss_pred ccCcCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 522 YTMVMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 522 ~~~~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
.+..++.++|||||||++|||+||+.||...
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~ 296 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPH 296 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 9999999999999999999999999999753
No 192
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=9e-31 Score=275.65 Aligned_cols=218 Identities=24% Similarity=0.296 Sum_probs=148.8
Q ss_pred ccccCcccccccccccceeeecC--C--CcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc-------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLP--N--GRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND------- 437 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~--~--g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~------- 437 (602)
..|...+.||+|+||.||+|+.. + +..||+|.++..... ...+.+.+|+.++..+.|+++..++...
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 166 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI--GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 166 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCS--HHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCC
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCH--HHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCe
Confidence 45777889999999999999853 2 246899998654322 2356788888887555555554443210
Q ss_pred -----------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 438 -----------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 438 -----------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
.....+++.++..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 167 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 167 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccc
Confidence 01233788999999999999999999 7899999999999999999999999999998664
Q ss_pred CCCC----CccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCC
Q 047576 501 ADSS----NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPP 575 (602)
Q Consensus 501 ~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~ 575 (602)
.... ......+++.|+|||++.+..++.++||||||+++|||+| |..||...... .....+.......
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~-------~~~~~~~~~~~~~ 316 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-------DITVYLLQGRRLL 316 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS-------CHHHHHHTTCCCC
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH-------HHHHHHHcCCCCC
Confidence 3221 1223457788999999999999999999999999999999 67787643211 1111222221111
Q ss_pred CCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 576 PVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 576 ~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
. ... ....+.+++..||+.||++
T Consensus 317 ~-p~~---~~~~l~~li~~cl~~dp~~ 339 (373)
T 3c1x_A 317 Q-PEY---CPDPLYEVMLKCWHPKAEM 339 (373)
T ss_dssp C-CTT---CCHHHHHHHHHHTCSSGGG
T ss_pred C-CCC---CCHHHHHHHHHHcCCChhh
Confidence 1 111 2334889999999999974
No 193
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.96 E-value=2.6e-30 Score=265.12 Aligned_cols=220 Identities=21% Similarity=0.315 Sum_probs=154.8
Q ss_pred CccccCcccccccccccceeeecC----CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccc-------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP----NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHN------- 436 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~------- 436 (602)
.++|...+.||+|+||.||+|+.. .++.||+|++...... ....+.+.+|+.++..+.|+++..++..
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS-QREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCC-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccc-hhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 567889999999999999999753 3558999998754332 2234678889998876666665544321
Q ss_pred -----------------------c---cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCccee
Q 047576 437 -----------------------D---AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFV 490 (602)
Q Consensus 437 -----------------------~---~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL 490 (602)
. .....+++.++..++.|+++||.||| +.+|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEE
Confidence 0 01234789999999999999999999 889999999999999999999999
Q ss_pred ecccccccccCCCC--CccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhh
Q 047576 491 ADFGTARLLHADSS--NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLID 567 (602)
Q Consensus 491 ~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ 567 (602)
+|||++........ ......+++.|+|||++.+..++.++||||||+++|+|++ |+.||..... ......
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------~~~~~~ 261 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN-------HEMYDY 261 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-------GGHHHH
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH-------HHHHHH
Confidence 99999987643321 1223457889999999999999999999999999999999 8999975321 111222
Q ss_pred hhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 568 VLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 568 ~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
+...... +.... ....+.+++..||+.||++
T Consensus 262 ~~~~~~~-~~~~~---~~~~l~~li~~~l~~dp~~ 292 (313)
T 3brb_A 262 LLHGHRL-KQPED---CLDELYEIMYSCWRTDPLD 292 (313)
T ss_dssp HHTTCCC-CCBTT---CCHHHHHHHHHTTCSSGGG
T ss_pred HHcCCCC-CCCcc---ccHHHHHHHHHHcCCChhh
Confidence 2222111 11111 2234889999999999974
No 194
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.96 E-value=6.5e-31 Score=289.77 Aligned_cols=216 Identities=25% Similarity=0.383 Sum_probs=162.7
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccc---------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFR--------------- 432 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~--------------- 432 (602)
.++|...+.||+|+||.||+|+..++..||||+++..... .+.|.+|+.++..+.|.++..
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e 341 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTE 341 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeee
Confidence 4568888999999999999999988889999999765432 356888999886665555444
Q ss_pred ---------ccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCC
Q 047576 433 ---------ILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS 503 (602)
Q Consensus 433 ---------~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~ 503 (602)
++... ....+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 342 ~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 417 (535)
T 2h8h_A 342 YMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417 (535)
T ss_dssp CCTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH
T ss_pred hhcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc
Confidence 33321 1234889999999999999999999 7899999999999999999999999999998764321
Q ss_pred C-CccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCChhh
Q 047576 504 S-NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 504 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
. ......++..|+|||++.+..++.++|||||||++|||+| |+.||..... ... .+.+......+....
T Consensus 418 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~-------~~~-~~~i~~~~~~~~~~~- 488 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-------REV-LDQVERGYRMPCPPE- 488 (535)
T ss_dssp HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH-------HHH-HHHHHTTCCCCCCTT-
T ss_pred eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-------HHH-HHHHHcCCCCCCCCC-
Confidence 1 1122346788999999999999999999999999999999 9999974321 111 112222222121111
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++..||+.||++
T Consensus 489 --~~~~l~~li~~cl~~dP~~ 507 (535)
T 2h8h_A 489 --CPESLHDLMCQCWRKEPEE 507 (535)
T ss_dssp --CCHHHHHHHHHHTCSSGGG
T ss_pred --CCHHHHHHHHHHcCCChhH
Confidence 3345889999999999974
No 195
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.96 E-value=5.9e-31 Score=286.87 Aligned_cols=222 Identities=21% Similarity=0.300 Sum_probs=167.4
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|...+.||+|+||.||+|+.. +|+.||||++...........+.+.+|+.++..+.|+++..++...
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 467899999999999999999865 7899999998654332222346788899999777777766554311
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeee---CCCCcceeecccccccccC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILL---NSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILl---d~~~~~kL~DFG~a~~~~~ 501 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++.....
T Consensus 105 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp ECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 01234789999999999999999999 7899999999999999 5678999999999987654
Q ss_pred CCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhh
Q 047576 502 DSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
.. ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ...+..+.......+.+. .
T Consensus 182 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~~~~~~~~-~ 251 (484)
T 3nyv_A 182 SK-KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE-------YDILKKVEKGKYTFELPQ-W 251 (484)
T ss_dssp CC-SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCCCCCCSGG-G
T ss_pred cc-ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHcCCCCCCCcc-c
Confidence 33 2334579999999998876 689999999999999999999999975322 222233333333222111 1
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
......+.+++.+|+++||++
T Consensus 252 ~~~s~~~~~li~~~L~~dp~~ 272 (484)
T 3nyv_A 252 KKVSESAKDLIRKMLTYVPSM 272 (484)
T ss_dssp GGSCHHHHHHHHHHTCSSGGG
T ss_pred ccCCHHHHHHHHHHCCCChhH
Confidence 112344789999999999974
No 196
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.96 E-value=1.9e-30 Score=261.47 Aligned_cols=212 Identities=22% Similarity=0.302 Sum_probs=155.0
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc----------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND---------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~---------- 437 (602)
.++|...+.||+|+||.||+|+. .|+.||||+++.... .+.+.+|+.++..+.|+++..++...
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv 93 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDAT-----AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 93 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchhH-----HHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEE
Confidence 46789999999999999999987 488999999976542 35678899998777776665544310
Q ss_pred ---------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCC
Q 047576 438 ---------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD 502 (602)
Q Consensus 438 ---------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~ 502 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 170 (278)
T 1byg_A 94 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 170 (278)
T ss_dssp ECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred EecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccc
Confidence 01122688889999999999999999 789999999999999999999999999998765432
Q ss_pred CCCccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCChhh
Q 047576 503 SSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 503 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
. ....+++.|+|||++.+..++.++||||||+++|||+| |+.||..... ... ...+......+....
T Consensus 171 ~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-------~~~-~~~~~~~~~~~~~~~- 238 (278)
T 1byg_A 171 Q---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-------KDV-VPRVEKGYKMDAPDG- 238 (278)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-------GGH-HHHHTTTCCCCCCTT-
T ss_pred c---cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-------HHH-HHHHhcCCCCCCccc-
Confidence 2 22357889999999998899999999999999999998 9999975321 111 111211111111111
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++..||+.||++
T Consensus 239 --~~~~l~~li~~~l~~~p~~ 257 (278)
T 1byg_A 239 --CPPAVYEVMKNCWHLDAAM 257 (278)
T ss_dssp --CCHHHHHHHHHHTCSSGGG
T ss_pred --CCHHHHHHHHHHhcCChhh
Confidence 2334888999999999974
No 197
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.96 E-value=2.3e-30 Score=289.66 Aligned_cols=209 Identities=22% Similarity=0.330 Sum_probs=153.3
Q ss_pred cccccccccceeeecC---CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhc------------------------C
Q 047576 376 CIGTGAYGSVYKAQLP---NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER------------------------G 428 (602)
Q Consensus 376 ~LG~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~------------------------g 428 (602)
.||+|+||.||+|.+. ++..||||+++..... ...+.+.+|+.++..+.| |
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK--ADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSS--TTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEEeCCCC
Confidence 7999999999999753 5678999999765322 234678889998855544 4
Q ss_pred ccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCC---
Q 047576 429 SLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN--- 505 (602)
Q Consensus 429 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~--- 505 (602)
+|.+++.. ....+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++........
T Consensus 421 ~L~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 421 PLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp BHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred cHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 44444432 2345899999999999999999999 789999999999999999999999999999876433221
Q ss_pred ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHHH
Q 047576 506 QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQD 584 (602)
Q Consensus 506 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 584 (602)
.....+++.|+|||++.+..++.++|||||||++|||+| |+.||..... .. ..+.+......+.... .
T Consensus 496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-------~~-~~~~i~~~~~~~~p~~---~ 564 (613)
T 2ozo_A 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-------PE-VMAFIEQGKRMECPPE---C 564 (613)
T ss_dssp ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS-------HH-HHHHHHTTCCCCCCTT---C
T ss_pred ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH-------HH-HHHHHHcCCCCCCCCc---C
Confidence 112345688999999999999999999999999999998 9999975321 11 1222222222111111 3
Q ss_pred HHHHHHHHhhccCcCCCC
Q 047576 585 ILLVSTISFACLQSNPKS 602 (602)
Q Consensus 585 ~~~l~~l~~~Cl~~dP~e 602 (602)
...+.+++..||+.||++
T Consensus 565 ~~~l~~li~~cl~~dP~~ 582 (613)
T 2ozo_A 565 PPELYALMSDCWIYKWED 582 (613)
T ss_dssp CHHHHHHHHHTTCSSTTT
T ss_pred CHHHHHHHHHHcCCChhH
Confidence 345889999999999975
No 198
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.96 E-value=4.7e-30 Score=260.23 Aligned_cols=219 Identities=22% Similarity=0.331 Sum_probs=161.8
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.+.|.....||+|+||.||+|.. .++..||+|++...... ....+.+.+|+.++..+.|+++..++...
T Consensus 25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 103 (290)
T 1t4h_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC 103 (290)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEE
T ss_pred ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCce
Confidence 34577788999999999999986 46889999998654332 22356788999999887777776554310
Q ss_pred -----------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCC--eEEeCCCCCCeeeC-CCCcceeecccccc
Q 047576 438 -----------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPS--VVHRDISSNNILLN-SKLEAFVADFGTAR 497 (602)
Q Consensus 438 -----------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~DLkp~NILld-~~~~~kL~DFG~a~ 497 (602)
.....+++..+..++.|++.||+||| +.+ |+||||||+||+++ .++.+||+|||++.
T Consensus 104 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 104 IVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 01134788999999999999999999 677 99999999999998 78999999999997
Q ss_pred cccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCC
Q 047576 498 LLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPV 577 (602)
Q Consensus 498 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 577 (602)
..... ......|++.|+|||++.+ .++.++||||+|+++|+|++|+.||...... ......+.....+...
T Consensus 181 ~~~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~ 251 (290)
T 1t4h_A 181 LKRAS--FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA------AQIYRRVTSGVKPASF 251 (290)
T ss_dssp GCCTT--SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH------HHHHHHHTTTCCCGGG
T ss_pred ccccc--ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcH------HHHHHHHhccCCcccc
Confidence 65332 2334579999999998764 5899999999999999999999999753221 1111112221111111
Q ss_pred ChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 578 DRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 578 ~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
... ....+.+++..||+.||++
T Consensus 252 ~~~---~~~~l~~li~~~l~~dp~~ 273 (290)
T 1t4h_A 252 DKV---AIPEVKEIIEGCIRQNKDE 273 (290)
T ss_dssp GGC---CCHHHHHHHHHHSCSSGGG
T ss_pred CCC---CCHHHHHHHHHHccCChhh
Confidence 111 1234889999999999974
No 199
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.96 E-value=1.3e-30 Score=262.25 Aligned_cols=219 Identities=22% Similarity=0.326 Sum_probs=157.0
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|...+.||+|+||.||+|+.. +|+.||||++...........+.+.+|+.++..+.|+++..++...
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 357889999999999999999875 7899999998655433333456788899998777666665543311
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS 504 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~ 504 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~- 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE- 165 (276)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred EeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCCc-
Confidence 01234788999999999999999999 7799999999999999999999999999998765432
Q ss_pred CccccccccccccccccccCcC-CccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHH
Q 047576 505 NQTLLAGSYGYIAPELAYTMVM-TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQ 583 (602)
Q Consensus 505 ~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 583 (602)
......|++.|+|||++.+..+ +.++||||+|+++|+|++|+.||+.... ......+.......+. .
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~--~--- 233 (276)
T 2h6d_A 166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-------PTLFKKIRGGVFYIPE--Y--- 233 (276)
T ss_dssp -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCCCCCCT--T---
T ss_pred ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-------HHHHHHhhcCcccCch--h---
Confidence 2233568999999999988765 6899999999999999999999974321 1111222222221111 0
Q ss_pred HHHHHHHHHhhccCcCCCC
Q 047576 584 DILLVSTISFACLQSNPKS 602 (602)
Q Consensus 584 ~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++.+|++.||++
T Consensus 234 ~~~~l~~li~~~l~~~p~~ 252 (276)
T 2h6d_A 234 LNRSVATLLMHMLQVDPLK 252 (276)
T ss_dssp SCHHHHHHHHHHTCSSGGG
T ss_pred cCHHHHHHHHHHccCChhh
Confidence 1233788999999999974
No 200
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.96 E-value=1.2e-29 Score=266.19 Aligned_cols=180 Identities=26% Similarity=0.355 Sum_probs=148.0
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
..+|.....||+|+||.||+|+.. +++.||||++...... ...+.+.+|+.++..+.|+++..++...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCH--HHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCc--HHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 467999999999999999999854 7889999998754322 2456788999999999888877654311
Q ss_pred ----------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 438 ----------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 438 ----------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 104 ~~~iv~e~~~~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 104 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp CEEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred eEEEEEcccCcCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 01234788999999999999999999 78999999999999999999999999999987653
Q ss_pred CCCC---ccccccccccccccccccC-cCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 502 DSSN---QTLLAGSYGYIAPELAYTM-VMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 502 ~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
.... .....||+.|+|||++.+. .++.++||||+||++|+|++|+.||...
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 235 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCC
Confidence 3221 2335799999999987654 4899999999999999999999999754
No 201
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.96 E-value=2.5e-30 Score=267.49 Aligned_cols=215 Identities=21% Similarity=0.352 Sum_probs=145.7
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhh-cCccccccccc--------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME-RGSLFRILHND-------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~-~gsL~~~l~~~-------- 437 (602)
..+|...+.||+|+||.||+|+. .+++.||||++...... ..+.+.+|+.++..+. |+++..++...
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEE---KNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHH---HHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchH---HHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 34788999999999999999986 47899999988554332 3456788999998885 87776653211
Q ss_pred ------------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCC--eEEeCCCCCCeeeCCCCcceee
Q 047576 438 ------------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPS--VVHRDISSNNILLNSKLEAFVA 491 (602)
Q Consensus 438 ------------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~DLkp~NILld~~~~~kL~ 491 (602)
.....+++.++..++.|++.||+||| +.+ |+||||||+||+++.++.+||+
T Consensus 104 ~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~ 180 (337)
T 3ll6_A 104 TGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLC 180 (337)
T ss_dssp TSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBC
T ss_pred cCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEe
Confidence 01234889999999999999999999 777 9999999999999999999999
Q ss_pred cccccccccCCCCC------------cccccccccccccccc---ccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccc
Q 047576 492 DFGTARLLHADSSN------------QTLLAGSYGYIAPELA---YTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLS 556 (602)
Q Consensus 492 DFG~a~~~~~~~~~------------~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~ 556 (602)
|||++......... .....||+.|+|||++ .+..++.++||||||+++|+|+||+.||......
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~- 259 (337)
T 3ll6_A 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL- 259 (337)
T ss_dssp CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH-
Confidence 99999876543211 1124589999999998 5667889999999999999999999999743221
Q ss_pred cCCCcccchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 557 SSYDPKIMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 557 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.+++.....+.... ....+.+++..||+.||++
T Consensus 260 ----------~~~~~~~~~~~~~~---~~~~~~~li~~~l~~~p~~ 292 (337)
T 3ll6_A 260 ----------RIVNGKYSIPPHDT---QYTVFHSLIRAMLQVNPEE 292 (337)
T ss_dssp ----------------CCCCTTCC---SSGGGHHHHHHHSCSSGGG
T ss_pred ----------HhhcCcccCCcccc---cchHHHHHHHHHccCChhh
Confidence 11111111111110 1122678889999999964
No 202
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.96 E-value=1.8e-30 Score=270.37 Aligned_cols=229 Identities=16% Similarity=0.160 Sum_probs=153.3
Q ss_pred CccccCcccccccccccceeeecC----CCcEEeeeccCCchhHH---HH-----HhhhhHhHHHHHHhhhcCccccccc
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP----NGRVFALKKLNSPETEE---LA-----FIRSFRNEAQVLSQMERGSLFRILH 435 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~---~~-----~~~~~~~E~~il~~l~~gsL~~~l~ 435 (602)
.++|...+.||+|+||.||+|+.. ++..||+|+........ .. ....+.+|+.++..+.|+++..++.
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 467999999999999999999875 57889999987553211 11 1123556777776666655544332
Q ss_pred cc-------------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCC--cc
Q 047576 436 ND-------------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKL--EA 488 (602)
Q Consensus 436 ~~-------------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~--~~ 488 (602)
.. .....+++.++..++.||+.||+||| +.+|+||||||+||+++.++ .+
T Consensus 116 ~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp EEEEESSSCEEEEEEEECEEEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTTSE
T ss_pred ccccccCCCcEEEEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCCcE
Confidence 10 01225899999999999999999999 78999999999999998887 99
Q ss_pred eeecccccccccCCCC-------CccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCc
Q 047576 489 FVADFGTARLLHADSS-------NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDP 561 (602)
Q Consensus 489 kL~DFG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~ 561 (602)
||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~--- 269 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA--- 269 (345)
T ss_dssp EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH---
T ss_pred EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH---
Confidence 9999999987643211 123457999999999999999999999999999999999999999632110000
Q ss_pred ccchhhhhccCCCCCCChhh--HHHHHHHHHHHhhccCcCCCC
Q 047576 562 KIMLIDVLDQRLPPPVDRKV--IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 562 ~~~~~~~~d~~l~~~~~~~~--~~~~~~l~~l~~~Cl~~dP~e 602 (602)
...........++....... ......+.+++..||+.||++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~ 312 (345)
T 2v62_A 270 VQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDE 312 (345)
T ss_dssp HHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTC
T ss_pred HHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCccc
Confidence 00001111111111000000 012235889999999999975
No 203
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.96 E-value=2e-30 Score=267.23 Aligned_cols=223 Identities=23% Similarity=0.265 Sum_probs=158.4
Q ss_pred ccccCcccccccccccceeeecC-CCcEEeeeccCCchhH-----HHHHhhhhHhHHHHHHhhhcCccccccccc-----
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETE-----ELAFIRSFRNEAQVLSQMERGSLFRILHND----- 437 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-----~~~~~~~~~~E~~il~~l~~gsL~~~l~~~----- 437 (602)
++|.....||+|+||.||+|+.. +++.||||++...... .......+.+|++++..+.|+++..++...
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 89 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY 89 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSSE
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCce
Confidence 57888999999999999999864 6889999998754321 122345688899999777776665543210
Q ss_pred ----------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCc---ceeeccccccc
Q 047576 438 ----------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLE---AFVADFGTARL 498 (602)
Q Consensus 438 ----------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~---~kL~DFG~a~~ 498 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||++..
T Consensus 90 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 166 (322)
T 2ycf_A 90 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166 (322)
T ss_dssp EEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence 01234788999999999999999999 789999999999999987654 99999999987
Q ss_pred ccCCCCCccccccccccccccccc---cCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCC
Q 047576 499 LHADSSNQTLLAGSYGYIAPELAY---TMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPP 575 (602)
Q Consensus 499 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~ 575 (602)
..... ......|++.|+|||++. +..++.++|||||||++|+|++|+.||...... ......+.+.....
T Consensus 167 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~ 239 (322)
T 2ycf_A 167 LGETS-LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ------VSLKDQITSGKYNF 239 (322)
T ss_dssp CCCCH-HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS------SCHHHHHHHTCCCC
T ss_pred ccccc-ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH------HHHHHHHHhCcccc
Confidence 64321 123356899999999874 456889999999999999999999999743211 01111122221111
Q ss_pred CCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 576 PVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 576 ~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
. ..........+.+++.+|++.||++
T Consensus 240 ~-~~~~~~~~~~~~~li~~~l~~dP~~ 265 (322)
T 2ycf_A 240 I-PEVWAEVSEKALDLVKKLLVVDPKA 265 (322)
T ss_dssp C-HHHHTTSCHHHHHHHHHHSCSSTTT
T ss_pred C-chhhhhcCHHHHHHHHHHcccCHhh
Confidence 1 0100112345889999999999985
No 204
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.96 E-value=4.4e-30 Score=263.45 Aligned_cols=217 Identities=24% Similarity=0.347 Sum_probs=159.9
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.+.|+....||+|+||.||+|+.. +|+.||+|++..... .+.+.+|+.++..+.|+++..++...
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 102 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-----LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC-----CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH-----HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence 457889999999999999999865 589999999865432 35677899988777766665544311
Q ss_pred --------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCC
Q 047576 438 --------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADS 503 (602)
Q Consensus 438 --------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~ 503 (602)
.....+++.++..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||.+.......
T Consensus 103 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (314)
T 3com_A 103 MEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM 179 (314)
T ss_dssp EECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred eecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence 01234789999999999999999999 7899999999999999999999999999998765443
Q ss_pred CCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCC-CCCChhhH
Q 047576 504 SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLP-PPVDRKVI 582 (602)
Q Consensus 504 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~ 582 (602)
.......|++.|+|||++.+..++.++||||||+++|+|++|+.||....... ....+.....+ ......
T Consensus 180 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~-- 250 (314)
T 3com_A 180 AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR-------AIFMIPTNPPPTFRKPEL-- 250 (314)
T ss_dssp SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-------HHHHHHHSCCCCCSSGGG--
T ss_pred cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH-------HHHHHhcCCCcccCCccc--
Confidence 33444578999999999999899999999999999999999999997533211 11111111100 000111
Q ss_pred HHHHHHHHHHhhccCcCCCC
Q 047576 583 QDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 583 ~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.+++..||+.||++
T Consensus 251 -~~~~l~~li~~~l~~dp~~ 269 (314)
T 3com_A 251 -WSDNFTDFVKQCLVKSPEQ 269 (314)
T ss_dssp -SCHHHHHHHHHHTCSCTTT
T ss_pred -CCHHHHHHHHHHccCChhh
Confidence 2234889999999999975
No 205
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.96 E-value=4.2e-30 Score=261.60 Aligned_cols=219 Identities=24% Similarity=0.295 Sum_probs=157.2
Q ss_pred CccccCcccccccccccceeeecCC----CcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPN----GRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND------ 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~------ 437 (602)
...|...+.||+|+||.||+|+..+ ...||+|.+...... ...+.+.+|+.++..+.|+++..++...
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI--GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSH--HHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCH--HHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence 3568888999999999999998532 336899998754332 3456788899988666666555543310
Q ss_pred ------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccc
Q 047576 438 ------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLL 499 (602)
Q Consensus 438 ------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~ 499 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 178 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred eEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccccc
Confidence 01233788999999999999999999 789999999999999999999999999999866
Q ss_pred cCCC----CCccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCC
Q 047576 500 HADS----SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLP 574 (602)
Q Consensus 500 ~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~ 574 (602)
.... .......+|+.|+|||.+.+..++.++||||+|+++|+|++ |.+||..... ......+......
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 251 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-------FDITVYLLQGRRL 251 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT-------TTHHHHHHTTCCC
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH-------HHHHHHHhcCCCC
Confidence 4321 11233457789999999999999999999999999999999 5556653221 1111122222111
Q ss_pred CCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 575 PPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 575 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.. ... ....+.+++..||+.||++
T Consensus 252 ~~-~~~---~~~~l~~li~~~l~~~p~~ 275 (298)
T 3f66_A 252 LQ-PEY---CPDPLYEVMLKCWHPKAEM 275 (298)
T ss_dssp CC-CTT---CCHHHHHHHHHHTCSSGGG
T ss_pred CC-Ccc---CCHHHHHHHHHHcCCChhh
Confidence 11 111 2234888999999999974
No 206
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=2.8e-30 Score=267.68 Aligned_cols=219 Identities=27% Similarity=0.385 Sum_probs=155.9
Q ss_pred CccccCcccccccccccceeeecCC-----CcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc-----
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPN-----GRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND----- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~----- 437 (602)
..+|...+.||+|+||.||+|+... +..||||+++..... .....+.+|+.++..+.|+++..++...
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 120 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTE--KQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCH--HHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC
Confidence 4568888999999999999997542 346999998754332 2345788899998766666655443210
Q ss_pred ------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccc
Q 047576 438 ------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLL 499 (602)
Q Consensus 438 ------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~ 499 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 121 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred cEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 01234889999999999999999999 789999999999999999999999999999876
Q ss_pred cCCCCC---ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCC
Q 047576 500 HADSSN---QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPP 575 (602)
Q Consensus 500 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~ 575 (602)
...... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+.+. ...
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-------~~~~~~~~~~-~~~ 269 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-------HEVMKAINDG-FRL 269 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTT-CCC
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH-------HHHHHHHHCC-CcC
Confidence 543211 122345778999999998899999999999999999999 9999964321 1112222222 111
Q ss_pred CCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 576 PVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 576 ~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
+.... ....+.+++..||+.||++
T Consensus 270 ~~~~~---~~~~l~~li~~~l~~~p~~ 293 (333)
T 1mqb_A 270 PTPMD---CPSAIYQLMMQCWQQERAR 293 (333)
T ss_dssp CCCTT---CBHHHHHHHHHHTCSSTTT
T ss_pred CCccc---CCHHHHHHHHHHcCCChhh
Confidence 11111 2344889999999999975
No 207
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.96 E-value=3.6e-30 Score=260.77 Aligned_cols=221 Identities=24% Similarity=0.353 Sum_probs=149.4
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|.....||+|+||.||+|+. .+|+.||+|++....... ...+.+.++...+..+.|+++..++...
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ-EQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcH-HHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 46799999999999999999986 578999999987553322 1223344444445555565555443210
Q ss_pred ----------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCC-CeEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 438 ----------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSP-SVVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 438 ----------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
.....+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||++....
T Consensus 85 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 85 MELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred EehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 01235889999999999999999999 66 99999999999999999999999999998765
Q ss_pred CCCCCcccccccccccccccc----ccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCC
Q 047576 501 ADSSNQTLLAGSYGYIAPELA----YTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPP 576 (602)
Q Consensus 501 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~ 576 (602)
.... .....||+.|+|||++ .+..++.++||||+|+++|+|+||+.||+.... ....+...++...+..
T Consensus 162 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~ 234 (290)
T 3fme_A 162 DDVA-KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT------PFQQLKQVVEEPSPQL 234 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC------HHHHHHHHHHSCCCCC
T ss_pred cccc-ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc------hHHHHHHHhccCCCCc
Confidence 4322 2334689999999996 556789999999999999999999999974211 1122233333332221
Q ss_pred CChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 577 VDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 577 ~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.... ....+.+++.+|++.||++
T Consensus 235 ~~~~---~~~~~~~li~~~l~~~p~~ 257 (290)
T 3fme_A 235 PADK---FSAEFVDFTSQCLKKNSKE 257 (290)
T ss_dssp CTTT---SCHHHHHHHHHHTCSSGGG
T ss_pred cccc---CCHHHHHHHHHHhhcChhh
Confidence 1111 2234789999999999974
No 208
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=3.8e-29 Score=258.64 Aligned_cols=209 Identities=23% Similarity=0.308 Sum_probs=194.0
Q ss_pred CCCCCCEEECcCCcCc------ccCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceee
Q 047576 153 ALSKLQLLDLSSNRLR------GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILI 226 (602)
Q Consensus 153 ~L~~L~~L~Ls~N~i~------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 226 (602)
..++++.|+|++|+++ +.+++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..++++++|++|+
T Consensus 79 ~~~~l~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 79 TQPGRVALELRSVPLPQFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp TSTTCCEEEEESSCCSSCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred cccceeEEEccCCCchhcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 3578999999999987 34889999999999999 88999999999999999999999 7899999999999999
Q ss_pred cccccCCC-CcccccC---------CCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEE
Q 047576 227 LAQNQLSG-LPQEIGN---------LKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHL 296 (602)
Q Consensus 227 L~~N~l~~-ip~~~~~---------l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 296 (602)
+++|++.+ +|..++. +++|++|+|++|+++ .+|..++.+++|++|+|++|.+++ +|..++.+++|++|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEE
Confidence 99988877 8887664 999999999999999 889999999999999999999996 56689999999999
Q ss_pred eccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccCCCCCcCCCC
Q 047576 297 DLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYSNKHLSSM 365 (602)
Q Consensus 297 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~l 365 (602)
+|++|++.+.+|..+..+++|+.|+|++|++.+.+|..+..+++|+.|++++|++.|.+|..+..+..+
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L 303 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPAN 303 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTT
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCc
Confidence 999999999999999999999999999999999999999999999999999999999999887665543
No 209
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.96 E-value=4.6e-30 Score=263.40 Aligned_cols=221 Identities=22% Similarity=0.337 Sum_probs=160.5
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhc--Cccccccccc--------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER--GSLFRILHND-------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~--gsL~~~l~~~-------- 437 (602)
.++|.....||+|+||.||+|+..+++.||||++...... ....+.+.+|+.++..+.+ +++..++...
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCC-HHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccccc-ccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 4679999999999999999999888999999998654322 2245678899999987764 5555443211
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS 504 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~ 504 (602)
.....+++.++..++.|+++||.||| +.+|+||||||+||++++ +.+||+|||++........
T Consensus 106 v~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~ 181 (313)
T 3cek_A 106 VMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTT 181 (313)
T ss_dssp EECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC------
T ss_pred EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccccccccCccc
Confidence 01234788899999999999999999 789999999999999965 8899999999987654322
Q ss_pred --Ccccccccccccccccccc-----------CcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhcc
Q 047576 505 --NQTLLAGSYGYIAPELAYT-----------MVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ 571 (602)
Q Consensus 505 --~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~ 571 (602)
......|++.|+|||++.+ ..++.++||||||+++|||++|+.||.... .....+..++++
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~~~~ 255 (313)
T 3cek_A 182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII------NQISKLHAIIDP 255 (313)
T ss_dssp --------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC------SHHHHHHHHHCT
T ss_pred cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH------HHHHHHHHHHhc
Confidence 1223468999999999875 467889999999999999999999997432 112223444444
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 572 RLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 572 ~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
......... ....+.+++..||+.||++
T Consensus 256 ~~~~~~~~~---~~~~l~~li~~~l~~dp~~ 283 (313)
T 3cek_A 256 NHEIEFPDI---PEKDLQDVLKCCLKRDPKQ 283 (313)
T ss_dssp TSCCCCCCC---SCHHHHHHHHHHTCSSTTT
T ss_pred ccccCCccc---chHHHHHHHHHHccCCccc
Confidence 433222211 1234788999999999975
No 210
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.96 E-value=8.4e-30 Score=263.52 Aligned_cols=174 Identities=22% Similarity=0.400 Sum_probs=140.6
Q ss_pred CccccCcccccccccccceeeec--CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCc----------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL--PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGS---------------- 429 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gs---------------- 429 (602)
.++|...+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|+.+++.+.+.+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~ 88 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDR----YCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH 88 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHH----HHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCc----hhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence 45799999999999999999975 3689999999975432 3456777888876655433
Q ss_pred --------------cccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCC-----------
Q 047576 430 --------------LFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS----------- 484 (602)
Q Consensus 430 --------------L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~----------- 484 (602)
+.+++... ....+++.++..++.|++.||+||| +.+|+||||||+||+++.
T Consensus 89 ~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 89 HGHICIVFELLGLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp TTEEEEEEECCCCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC---
T ss_pred CCcEEEEEcCCCCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCcc
Confidence 22222211 1124789999999999999999999 789999999999999987
Q ss_pred --------CCcceeecccccccccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 485 --------KLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 485 --------~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
++.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 237 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH 237 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 668999999999865432 23357899999999999999999999999999999999999999754
No 211
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.96 E-value=9.6e-30 Score=265.35 Aligned_cols=182 Identities=24% Similarity=0.383 Sum_probs=147.7
Q ss_pred CCccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc-------
Q 047576 367 TPRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA------- 438 (602)
Q Consensus 367 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~------- 438 (602)
..++|.....||+|+||.||+|+.. +|+.||||++...... .....+.+|+.++..+.|+++..++....
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 86 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKP--LFALRTLREIKILKHFKHENIITIFNIQRPDSFENF 86 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSH--HHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccc--hHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCcc
Confidence 3578999999999999999999864 6899999998654322 24467788999999999988876653210
Q ss_pred ------------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 439 ------------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 439 ------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 87 ~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 87 NEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp CCEEEEECCCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred ceEEEEEeccCccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 1234788999999999999999999 7899999999999999999999999999998764
Q ss_pred CCCCC----------cccccccccccccccccc-CcCCccchhHHHHHHHHHHHcCCCCCCCCc
Q 047576 501 ADSSN----------QTLLAGSYGYIAPELAYT-MVMTEKYDVYSFGVVTLEVLMGKHPRDLHS 553 (602)
Q Consensus 501 ~~~~~----------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~Pf~~~~ 553 (602)
..... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 227 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 32111 122468999999998765 678999999999999999999999997543
No 212
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.96 E-value=4.1e-30 Score=272.73 Aligned_cols=175 Identities=26% Similarity=0.327 Sum_probs=143.9
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc----------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND---------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~---------- 437 (602)
..+|...+.||+|+||.||+|+...+..||+|++.... ....+|++++..+.|+++..+....
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~-------~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~ 111 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK-------RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEV 111 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT-------TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc-------chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCce
Confidence 35789999999999999999998777779999875432 2334799999999998887654211
Q ss_pred ---------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeC-CCCcceeecccc
Q 047576 438 ---------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLN-SKLEAFVADFGT 495 (602)
Q Consensus 438 ---------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld-~~~~~kL~DFG~ 495 (602)
.....+++..+..++.|+++||+||| +.+|+||||||+||+++ .++.+||+|||+
T Consensus 112 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 112 FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 00234788889999999999999999 78999999999999999 789999999999
Q ss_pred cccccCCCCCccccccccccccccccccC-cCCccchhHHHHHHHHHHHcCCCCCCCCc
Q 047576 496 ARLLHADSSNQTLLAGSYGYIAPELAYTM-VMTEKYDVYSFGVVTLEVLMGKHPRDLHS 553 (602)
Q Consensus 496 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~Pf~~~~ 553 (602)
++....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||....
T Consensus 189 a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 246 (394)
T 4e7w_A 189 AKILIAGEP-NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES 246 (394)
T ss_dssp CEECCTTCC-CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccccCCCC-CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 987644332 2335789999999998765 48999999999999999999999997643
No 213
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.96 E-value=7.5e-30 Score=269.67 Aligned_cols=174 Identities=25% Similarity=0.352 Sum_probs=142.4
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ....+|++++..+.|+++..++...
T Consensus 6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-------RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT-------TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 46799999999999999999975 579999999886442 2345789999888888776654311
Q ss_pred ------------------------------------------------------cchhhhcHHHHHHHHHHHHHHHHHhh
Q 047576 438 ------------------------------------------------------AEAVELDWAKRVNIVKAMAHALAYLH 463 (602)
Q Consensus 438 ------------------------------------------------------~~~~~l~~~~~~~i~~~ia~~L~~LH 463 (602)
.....+++..+..++.|+++||+|||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp -------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 01234788899999999999999999
Q ss_pred hcCCCCeEEeCCCCCCeeeC-CCCcceeecccccccccCCCCCccccccccccccccccccCc-CCccchhHHHHHHHHH
Q 047576 464 HDCSPSVVHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMV-MTEKYDVYSFGVVTLE 541 (602)
Q Consensus 464 ~~~~~~ivH~DLkp~NILld-~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~e 541 (602)
+.+|+||||||+||+++ .++.+||+|||+++....... .....||+.|+|||++.+.. ++.++||||+||++||
T Consensus 159 ---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 159 ---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP-SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp ---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC-CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred ---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC-CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence 88999999999999997 688999999999987644332 23357899999999988754 8999999999999999
Q ss_pred HHcCCCCCCCC
Q 047576 542 VLMGKHPRDLH 552 (602)
Q Consensus 542 lltG~~Pf~~~ 552 (602)
|++|+.||...
T Consensus 235 ll~g~~pf~~~ 245 (383)
T 3eb0_A 235 LILGKPLFSGE 245 (383)
T ss_dssp HHHSSCSSCCS
T ss_pred HHhCCCCCCCC
Confidence 99999999854
No 214
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.96 E-value=4.9e-30 Score=269.97 Aligned_cols=178 Identities=31% Similarity=0.425 Sum_probs=145.0
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc--------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA-------- 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~-------- 438 (602)
.++|.....||+|+||.||+|+. .+|+.||||++...... ....+.+.+|+.++..+.|+++..++....
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS-EIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSS-HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccc-hhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 46788899999999999999985 46899999998764332 234567889999999998888776554211
Q ss_pred -----------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 439 -----------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 439 -----------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 120 YDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA 196 (371)
T ss_dssp CCCEEEEECCCEEHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred eeEEEEEccccccHHHHhhcCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence 0123789999999999999999999 78999999999999999999999999999986543
Q ss_pred CCCCcccccccccccccccccc-CcCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 502 DSSNQTLLAGSYGYIAPELAYT-MVMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
. .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 197 ~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 245 (371)
T 4exu_A 197 E---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 245 (371)
T ss_dssp ------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred C---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 2 233578999999999887 67899999999999999999999999754
No 215
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.96 E-value=3.4e-30 Score=259.96 Aligned_cols=206 Identities=21% Similarity=0.382 Sum_probs=160.8
Q ss_pred ccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccc------------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILH------------ 435 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~------------ 435 (602)
.+|...+.||+|+||.||+|+.. +++.||+|++.... +.+.+|++++..+.|+++..++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 57888999999999999999875 79999999986543 34667888887666666554322
Q ss_pred -----------------------------cccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCC
Q 047576 436 -----------------------------NDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKL 486 (602)
Q Consensus 436 -----------------------------~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~ 486 (602)
.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETT
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCC
Confidence 11 1234789999999999999999999 78999999999999999999
Q ss_pred cceeecccccccccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchh
Q 047576 487 EAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLI 566 (602)
Q Consensus 487 ~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~ 566 (602)
.+||+|||++........ .....|++.|+|||++.+..++.++||||||+++|+|++|..||.... ....
T Consensus 160 ~~kl~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---------~~~~ 229 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDGK-RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS---------KFFT 229 (284)
T ss_dssp EEEECCCTTCEESSCCSC-CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH---------HHHH
T ss_pred CEEECcchhheecccccc-ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH---------HHHH
Confidence 999999999987654332 233568999999999999899999999999999999999999975211 1122
Q ss_pred hhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 567 DVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 567 ~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.+.+..++...+. .+.+++..||+.||++
T Consensus 230 ~~~~~~~~~~~~~-------~~~~li~~~l~~dp~~ 258 (284)
T 2a19_B 230 DLRDGIISDIFDK-------KEKTLLQKLLSKKPED 258 (284)
T ss_dssp HHHTTCCCTTSCH-------HHHHHHHHHTCSSGGG
T ss_pred HhhcccccccCCH-------HHHHHHHHHccCChhh
Confidence 2333333333332 2678999999999974
No 216
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.96 E-value=2.9e-30 Score=263.73 Aligned_cols=217 Identities=21% Similarity=0.328 Sum_probs=161.5
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|...+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|+.++..+.|+++..++...
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF---RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccccc---chHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 357888999999999999999864 7899999998754332 235677899998777766665543210
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeee---CCCCcceeecccccccccC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILL---NSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILl---d~~~~~kL~DFG~a~~~~~ 501 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||.+.....
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 85 MQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp ECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred EEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 01234788999999999999999999 7899999999999999 7889999999999876432
Q ss_pred CCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCC--CCCCh
Q 047576 502 DSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLP--PPVDR 579 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~--~~~~~ 579 (602)
. ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||..... ......+.+.... .+...
T Consensus 162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~i~~~~~~~~~~~~~ 232 (304)
T 2jam_A 162 G--IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-------SKLFEKIKEGYYEFESPFWD 232 (304)
T ss_dssp B--TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHCCCCCCTTTTT
T ss_pred C--ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHcCCCCCCccccc
Confidence 2 22335689999999999999999999999999999999999999975321 1112222222221 11111
Q ss_pred hhHHHHHHHHHHHhhccCcCCCC
Q 047576 580 KVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 580 ~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
. ....+.+++.+|++.||++
T Consensus 233 ~---~~~~~~~li~~~l~~dp~~ 252 (304)
T 2jam_A 233 D---ISESAKDFICHLLEKDPNE 252 (304)
T ss_dssp T---SCHHHHHHHHHHHCSSTTT
T ss_pred c---CCHHHHHHHHHHcCCChhH
Confidence 1 2234889999999999975
No 217
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.96 E-value=3.1e-30 Score=274.71 Aligned_cols=176 Identities=24% Similarity=0.380 Sum_probs=131.4
Q ss_pred ccccC-cccccccccccceeeecC---CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc------
Q 047576 369 RKIDS-KYCIGTGAYGSVYKAQLP---NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA------ 438 (602)
Q Consensus 369 ~~f~~-~~~LG~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~------ 438 (602)
+.|.. .+.||+|+||.||+|+.. +++.||||++...... ..+.+|+.++..+.|+++..++....
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS-----MSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC-----HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC-----HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 34554 457999999999999854 5789999999765432 45778999999999988876543210
Q ss_pred --------------------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeee----CCCCcc
Q 047576 439 --------------------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILL----NSKLEA 488 (602)
Q Consensus 439 --------------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILl----d~~~~~ 488 (602)
....+++.++..|+.||+.||+||| +.+|+||||||+|||+ +.++.+
T Consensus 95 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 95 VWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcE
Confidence 0013788899999999999999999 7899999999999999 677899
Q ss_pred eeecccccccccCCC---CCccccccccccccccccccC-cCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 489 FVADFGTARLLHADS---SNQTLLAGSYGYIAPELAYTM-VMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 489 kL~DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
||+|||+++...... .......||+.|+|||++.+. .++.++||||+||++|||+||+.||...
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 999999998765322 122335789999999998874 4899999999999999999999999754
No 218
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.96 E-value=1.7e-30 Score=268.27 Aligned_cols=226 Identities=22% Similarity=0.324 Sum_probs=164.3
Q ss_pred CccccCcccccccccccceeeec-----CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc-----
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-----PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND----- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~----- 437 (602)
.++|...+.||+|+||.||+|++ .+++.||||++...... ..+.+.+|+.++..+.|+++..++...
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSH---HHHHHHHHHHHHHTCCCTTBCCEEEEECC---
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHH---HHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC
Confidence 45788899999999999999973 46899999998765432 346788899988666665554432210
Q ss_pred --------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccc
Q 047576 438 --------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTAR 497 (602)
Q Consensus 438 --------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~ 497 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred CceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchh
Confidence 01234789999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCC---ccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCccc-c---cCCCc----ccchh
Q 047576 498 LLHADSSN---QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTL-S---SSYDP----KIMLI 566 (602)
Q Consensus 498 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~-~---~~~~~----~~~~~ 566 (602)
........ .....++..|+|||++.+..++.++||||||+++|||+||+.||...... . ..... ...+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred hccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHH
Confidence 76543321 12235677899999999888999999999999999999999998642110 0 00000 01122
Q ss_pred hhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 567 DVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 567 ~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
+.+......+.... ....+.+++..||+.||++
T Consensus 274 ~~~~~~~~~~~~~~---~~~~l~~li~~cl~~dP~~ 306 (326)
T 2w1i_A 274 ELLKNNGRLPRPDG---CPDEIYMIMTECWNNNVNQ 306 (326)
T ss_dssp HHHHTTCCCCCCTT---CCHHHHHHHHHHSCSSGGG
T ss_pred HHhhcCCCCCCCCc---ccHHHHHHHHHHcCCChhh
Confidence 33332222222111 3345889999999999974
No 219
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.96 E-value=2.7e-30 Score=281.79 Aligned_cols=221 Identities=20% Similarity=0.300 Sum_probs=164.3
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|...+.||+|+||.||+|+.. +++.||||++...... ......+.+|+.++..+.|+++..++...
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc-chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 467999999999999999999864 7899999998643221 11235678899999888877776654321
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeC---CCCcceeecccccccccC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLN---SKLEAFVADFGTARLLHA 501 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld---~~~~~kL~DFG~a~~~~~ 501 (602)
.....+++.++..++.|++.||.||| +.+|+||||||+||+++ .++.+||+|||++.....
T Consensus 100 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 01234789999999999999999999 78999999999999995 456799999999987654
Q ss_pred CCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhh
Q 047576 502 DSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
.. ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ...+..+.......+.+. .
T Consensus 177 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~~~~~~~~-~ 246 (486)
T 3mwu_A 177 NT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-------YDILKRVETGKYAFDLPQ-W 246 (486)
T ss_dssp C-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCCCSCSGG-G
T ss_pred CC-ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCCCCCcc-c
Confidence 32 2334579999999999876 589999999999999999999999975321 122233333333222111 1
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
......+.+++.+||+.||++
T Consensus 247 ~~~s~~~~~li~~~L~~dp~~ 267 (486)
T 3mwu_A 247 RTISDDAKDLIRKMLTFHPSL 267 (486)
T ss_dssp GGSCHHHHHHHHHHTCSSTTT
T ss_pred CCCCHHHHHHHHHHcCCChhh
Confidence 112344789999999999975
No 220
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.96 E-value=2.7e-30 Score=266.43 Aligned_cols=218 Identities=22% Similarity=0.323 Sum_probs=153.1
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh-hcCccccccccc--------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM-ERGSLFRILHND-------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l-~~gsL~~~l~~~-------- 437 (602)
.++|...+.||+|+||.||+|+. .+|+.||||++...... .+.+.+|+.++..+ .|+++..++...
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~ 98 (326)
T 2x7f_A 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE----EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 98 (326)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSST----THHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCccc----HHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccc
Confidence 57899999999999999999986 47899999998654322 34567788877665 455554432210
Q ss_pred ----------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccc
Q 047576 438 ----------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGT 495 (602)
Q Consensus 438 ----------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~ 495 (602)
.....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 175 (326)
T 2x7f_A 99 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGV 175 (326)
T ss_dssp CCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCTT
T ss_pred cceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeCcC
Confidence 01234788899999999999999999 78999999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccccc-----cCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhc
Q 047576 496 ARLLHADSSNQTLLAGSYGYIAPELAY-----TMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLD 570 (602)
Q Consensus 496 a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d 570 (602)
+..............|++.|+|||++. +..++.++||||||+++|+|+||+.||...... .....+..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~ 248 (326)
T 2x7f_A 176 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-------RALFLIPR 248 (326)
T ss_dssp TC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHH
T ss_pred ceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-------HHHHHhhc
Confidence 987654333334457899999999987 556889999999999999999999999753321 11112222
Q ss_pred cCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 571 QRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 571 ~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
...+...... ....+.+++..||+.||++
T Consensus 249 ~~~~~~~~~~---~~~~l~~li~~~l~~dp~~ 277 (326)
T 2x7f_A 249 NPAPRLKSKK---WSKKFQSFIESCLVKNHSQ 277 (326)
T ss_dssp SCCCCCSCSC---SCHHHHHHHHHHCCSSGGG
T ss_pred CccccCCccc---cCHHHHHHHHHHhccChhh
Confidence 1111111111 1234788999999999974
No 221
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.96 E-value=7.9e-30 Score=263.41 Aligned_cols=174 Identities=19% Similarity=0.297 Sum_probs=143.0
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhh-cCcccccccccc-------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME-RGSLFRILHNDA------- 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~-~gsL~~~l~~~~------- 438 (602)
.++|...+.||+|+||.||+|+. .+++.||||++..... +.+.+|+.+++.+. |+++..+.....
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK------KKIKREIKILENLRGGPNIITLADIVKDPVSRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCH------HHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccch------HHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence 46799999999999999999975 5789999999875432 45778999998886 666655433110
Q ss_pred --------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCC-cceeecccccccccCCC
Q 047576 439 --------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKL-EAFVADFGTARLLHADS 503 (602)
Q Consensus 439 --------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~-~~kL~DFG~a~~~~~~~ 503 (602)
....+++.++..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+++......
T Consensus 109 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp EEEEECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred EEEEeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 0123788999999999999999999 78999999999999999776 89999999998765433
Q ss_pred CCcccccccccccccccccc-CcCCccchhHHHHHHHHHHHcCCCCCCC
Q 047576 504 SNQTLLAGSYGYIAPELAYT-MVMTEKYDVYSFGVVTLEVLMGKHPRDL 551 (602)
Q Consensus 504 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~Pf~~ 551 (602)
. .....|+..|+|||++.+ ..++.++||||+||++|+|++|+.||..
T Consensus 186 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~ 233 (330)
T 3nsz_A 186 E-YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 233 (330)
T ss_dssp C-CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred c-cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 2 334578999999999887 6689999999999999999999999953
No 222
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.96 E-value=5.1e-30 Score=260.91 Aligned_cols=181 Identities=25% Similarity=0.335 Sum_probs=145.0
Q ss_pred ccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc---------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA--------- 438 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~--------- 438 (602)
++|...+.||+|+||.||+|+.. +|+.||||++...... ....+.+.+|+.++..+.|+++..++....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccc-hhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 57888999999999999999865 7899999998654322 223456788999998888877766543210
Q ss_pred --------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC
Q 047576 439 --------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS 504 (602)
Q Consensus 439 --------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~ 504 (602)
....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+........
T Consensus 82 e~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 82 EFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp ECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred EcccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 0124788899999999999999999 78999999999999999999999999999987654433
Q ss_pred CccccccccccccccccccCc-CCccchhHHHHHHHHHHHcCCCCCCCCc
Q 047576 505 NQTLLAGSYGYIAPELAYTMV-MTEKYDVYSFGVVTLEVLMGKHPRDLHS 553 (602)
Q Consensus 505 ~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~elltG~~Pf~~~~ 553 (602)
......+++.|+|||++.+.. ++.++||||||+++|+|+||+.||....
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 208 (299)
T 2r3i_A 159 TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208 (299)
T ss_dssp CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence 334457899999999988765 7899999999999999999999997543
No 223
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.96 E-value=6.5e-30 Score=260.05 Aligned_cols=223 Identities=20% Similarity=0.287 Sum_probs=164.8
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCch------hHHHHHhhhhHhHHHHHHhhh-cCccccccccc--
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPE------TEELAFIRSFRNEAQVLSQME-RGSLFRILHND-- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~------~~~~~~~~~~~~E~~il~~l~-~gsL~~~l~~~-- 437 (602)
.++|.....||+|+||.||+|+.. +|+.||||++.... .......+.+.+|+.++..+. |+++..++...
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 578999999999999999999874 68999999986442 122234567888999886664 65555443211
Q ss_pred --------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccc
Q 047576 438 --------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTAR 497 (602)
Q Consensus 438 --------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~ 497 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+.
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 172 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSC 172 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccchh
Confidence 01234789999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCCccccccccccccccccc------cCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhcc
Q 047576 498 LLHADSSNQTLLAGSYGYIAPELAY------TMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ 571 (602)
Q Consensus 498 ~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~ 571 (602)
...... ......|++.|+|||++. ...++.++||||||+++|+|++|+.||..... ......+...
T Consensus 173 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~ 244 (298)
T 1phk_A 173 QLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-------MLMLRMIMSG 244 (298)
T ss_dssp ECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHT
T ss_pred hcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH-------HHHHHHHhcC
Confidence 765432 233457899999999875 44578899999999999999999999974321 1112223332
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 572 RLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 572 ~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+... .......+.+++.+|++.||++
T Consensus 245 ~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~ 274 (298)
T 1phk_A 245 NYQFGSPE-WDDYSDTVKDLVSRFLVVQPQK 274 (298)
T ss_dssp CCCCCTTT-GGGSCHHHHHHHHHHCCSSGGG
T ss_pred CcccCccc-ccccCHHHHHHHHHHccCCccc
Confidence 22211110 0112345889999999999974
No 224
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.96 E-value=2.2e-30 Score=261.51 Aligned_cols=222 Identities=20% Similarity=0.271 Sum_probs=161.2
Q ss_pred ccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHH---HHhhhhHhHHHHHHhhhcCccccccccc-------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEEL---AFIRSFRNEAQVLSQMERGSLFRILHND------- 437 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~---~~~~~~~~E~~il~~l~~gsL~~~l~~~------- 437 (602)
++|...+.||+|+||.||+|+.. +|+.||+|+++....... ...+.+.+|+.++..+.|+++..++...
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46888999999999999999875 689999998865432110 1235688899999777766665543311
Q ss_pred ---------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCC----cceeeccccccc
Q 047576 438 ---------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKL----EAFVADFGTARL 498 (602)
Q Consensus 438 ---------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~----~~kL~DFG~a~~ 498 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||.+..
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 01234789999999999999999999 78999999999999998877 899999999987
Q ss_pred ccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCC
Q 047576 499 LHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVD 578 (602)
Q Consensus 499 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 578 (602)
...... .....|++.|+|||++.+..++.++||||||+++|+|++|+.||..... ......+.......+.
T Consensus 162 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~- 232 (283)
T 3bhy_A 162 IEAGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK-------QETLTNISAVNYDFDE- 232 (283)
T ss_dssp CC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHTTCCCCCH-
T ss_pred ccCCCc-ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch-------HHHHHHhHhcccCCcc-
Confidence 644322 2335689999999999988999999999999999999999999975321 1111222222111110
Q ss_pred hhhHHHHHHHHHHHhhccCcCCCC
Q 047576 579 RKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 579 ~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.........+.+++.+|++.||++
T Consensus 233 ~~~~~~~~~~~~li~~~l~~dp~~ 256 (283)
T 3bhy_A 233 EYFSNTSELAKDFIRRLLVKDPKR 256 (283)
T ss_dssp HHHTTCCHHHHHHHHTTSCSSGGG
T ss_pred hhcccCCHHHHHHHHHHccCCHhH
Confidence 000112344789999999999974
No 225
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.96 E-value=1.3e-29 Score=258.61 Aligned_cols=219 Identities=21% Similarity=0.233 Sum_probs=166.1
Q ss_pred ccccCcccccccccccceeeecC-CCcEEeeeccCCchhHH-HHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEE-LAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
++|...+.||+|+||.||+|+.. +++.||+|++....... ....+.+.+|+.++..+.|+++..++...
T Consensus 5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY 84 (305)
T ss_dssp CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence 57999999999999999999874 68899999987554321 22356788999999888888877655421
Q ss_pred ----------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 438 ----------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 438 ----------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+.....
T Consensus 85 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 161 (305)
T 2wtk_C 85 MVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161 (305)
T ss_dssp EEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred EEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence 01234788999999999999999999 78999999999999999999999999999987643
Q ss_pred CC--CCccccccccccccccccccCc--CCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCC
Q 047576 502 DS--SNQTLLAGSYGYIAPELAYTMV--MTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPV 577 (602)
Q Consensus 502 ~~--~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 577 (602)
.. .......|++.|+|||++.+.. ++.++||||+|+++|||++|+.||..... ......+.......+.
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~i~~~~~~~~~ 234 (305)
T 2wtk_C 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI-------YKLFENIGKGSYAIPG 234 (305)
T ss_dssp TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHCCCCCCS
T ss_pred cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH-------HHHHHHHhcCCCCCCC
Confidence 22 1223356899999999987644 47899999999999999999999975321 1112222222222111
Q ss_pred ChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 578 DRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 578 ~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
. ....+.+++.+|++.||++
T Consensus 235 ~-----~~~~l~~li~~~l~~dp~~ 254 (305)
T 2wtk_C 235 D-----CGPPLSDLLKGMLEYEPAK 254 (305)
T ss_dssp S-----SCHHHHHHHHHHTCSSTTT
T ss_pred c-----cCHHHHHHHHHHccCChhh
Confidence 1 2234778999999999975
No 226
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.4e-30 Score=271.90 Aligned_cols=220 Identities=18% Similarity=0.186 Sum_probs=154.1
Q ss_pred CccccCcccccccccccceeeecC---------CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhh------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP---------NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME------------ 426 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~---------~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~------------ 426 (602)
.++|...+.||+|+||.||+|+.. +++.||+|++... +.+.+|+.++..+.
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~ 112 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLY 112 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhc
Confidence 368999999999999999999875 3789999998654 22334444443333
Q ss_pred ----------------------------cCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCC
Q 047576 427 ----------------------------RGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSN 478 (602)
Q Consensus 427 ----------------------------~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~ 478 (602)
+++|.+++... ....+++.++..++.||+.||+||| +.+|+||||||+
T Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~ 188 (352)
T 2jii_A 113 STPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAE 188 (352)
T ss_dssp TCTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGG
T ss_pred cCCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHH
Confidence 44555554432 1355899999999999999999999 789999999999
Q ss_pred CeeeCCCC--cceeecccccccccCCCC-------CccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCC
Q 047576 479 NILLNSKL--EAFVADFGTARLLHADSS-------NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPR 549 (602)
Q Consensus 479 NILld~~~--~~kL~DFG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf 549 (602)
||+++.++ .+||+|||+++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||
T Consensus 189 NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 268 (352)
T 2jii_A 189 NIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPW 268 (352)
T ss_dssp GEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred HEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 99999998 999999999987643221 112347999999999999989999999999999999999999999
Q ss_pred CCCcccccCCCcccchhhhhccCCC--CCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 550 DLHSTLSSSYDPKIMLIDVLDQRLP--PPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~d~~l~--~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.......... ......+...... ..... .......+.+++..||+.||++
T Consensus 269 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~ 320 (352)
T 2jii_A 269 TNCLPNTEDI--MKQKQKFVDKPGPFVGPCGH-WIRPSETLQKYLKVVMALTYEE 320 (352)
T ss_dssp GGGTTCHHHH--HHHHHHHHHSCCCEECTTSC-EECCCHHHHHHHHHHHTCCTTC
T ss_pred ccCCcCHHHH--HHHHHhccCChhhhhhhccc-cCCCcHHHHHHHHHHHhCChhh
Confidence 7532110000 0000111111110 00000 0001234888999999999975
No 227
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.96 E-value=3.8e-30 Score=267.82 Aligned_cols=178 Identities=21% Similarity=0.389 Sum_probs=145.1
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHH--------------hhhhHhHHHHH-----------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAF--------------IRSFRNEAQVL----------- 422 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~--------------~~~~~~E~~il----------- 422 (602)
.++|.....||+|+||.||+|+. +|+.||||++.......... .+.+.+|+.++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46799999999999999999999 89999999986443221101 16678888887
Q ss_pred --------------HhhhcCccccc------cccccchhhhcHHHHHHHHHHHHHHHHHhhhcCC-CCeEEeCCCCCCee
Q 047576 423 --------------SQMERGSLFRI------LHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCS-PSVVHRDISSNNIL 481 (602)
Q Consensus 423 --------------~~l~~gsL~~~------l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~-~~ivH~DLkp~NIL 481 (602)
||+++++|.++ +... ....+++..+..++.|++.||+||| + .+|+||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEE
Confidence 45556666666 3321 1345899999999999999999999 6 89999999999999
Q ss_pred eCCCCcceeecccccccccCCCCCccccccccccccccccccC-cCCc-cchhHHHHHHHHHHHcCCCCCCCC
Q 047576 482 LNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTM-VMTE-KYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 482 ld~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
++.++.+||+|||.+...... ......|++.|+|||++.+. .++. ++||||||+++|||++|+.||...
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 255 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK 255 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999876433 23345789999999999887 5665 999999999999999999999754
No 228
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.96 E-value=3.2e-30 Score=261.75 Aligned_cols=220 Identities=22% Similarity=0.304 Sum_probs=160.5
Q ss_pred CccccCcc-cccccccccceeeec---CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc------
Q 047576 368 PRKIDSKY-CIGTGAYGSVYKAQL---PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND------ 437 (602)
Q Consensus 368 t~~f~~~~-~LG~G~~g~Vy~~~~---~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~------ 437 (602)
..+|.... .||+|+||.||+|.. .+++.||||+++..... ....+.+.+|+.++..+.|+++..++...
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND-PALKDELLAEANVMQQLDNPYIVRMIGICEAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcE
Confidence 45677777 999999999999953 35788999998755322 23456788999999777776665544321
Q ss_pred ---------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCC
Q 047576 438 ---------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD 502 (602)
Q Consensus 438 ---------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~ 502 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 94 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 170 (291)
T ss_dssp EEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence 01234789999999999999999999 789999999999999999999999999999876543
Q ss_pred CCC---ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCC
Q 047576 503 SSN---QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVD 578 (602)
Q Consensus 503 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 578 (602)
... .....+++.|+|||++.+..++.++||||||+++|+|+| |+.||..... ....+.+......+..
T Consensus 171 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~ 242 (291)
T 1xbb_A 171 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--------SEVTAMLEKGERMGCP 242 (291)
T ss_dssp CSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHHHTTCCCCCC
T ss_pred CCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCCCCC
Confidence 321 112346688999999998889999999999999999999 9999975321 1112222221111111
Q ss_pred hhhHHHHHHHHHHHhhccCcCCCC
Q 047576 579 RKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 579 ~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.. ....+.+++..||+.||++
T Consensus 243 ~~---~~~~l~~li~~~l~~dp~~ 263 (291)
T 1xbb_A 243 AG---CPREMYDLMNLCWTYDVEN 263 (291)
T ss_dssp TT---CCHHHHHHHHHHTCSSTTT
T ss_pred CC---CCHHHHHHHHHHcCCChhh
Confidence 11 2334889999999999975
No 229
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.96 E-value=2.4e-30 Score=290.32 Aligned_cols=213 Identities=23% Similarity=0.317 Sum_probs=156.6
Q ss_pred ccccccccccceeeec---CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc--------------
Q 047576 375 YCIGTGAYGSVYKAQL---PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND-------------- 437 (602)
Q Consensus 375 ~~LG~G~~g~Vy~~~~---~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~-------------- 437 (602)
+.||+|+||.||+|.+ ..++.||||+++..... ....+.+.+|++++..+.|+++..++...
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND-PALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGC-GGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCC
Confidence 4699999999999954 35688999998754332 22356788999999777666665544311
Q ss_pred -------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC---Ccc
Q 047576 438 -------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS---NQT 507 (602)
Q Consensus 438 -------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~---~~~ 507 (602)
.....+++.++..|+.||+.||+||| +++|+||||||+|||++.++.+||+|||+++....+.. ...
T Consensus 454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 530 (635)
T 4fl3_A 454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530 (635)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence 01234889999999999999999999 78999999999999999999999999999987654322 122
Q ss_pred ccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHHHHH
Q 047576 508 LLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQDIL 586 (602)
Q Consensus 508 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 586 (602)
...+++.|+|||++.+..++.++|||||||++|||+| |+.||..... . ...+.+......+.... ...
T Consensus 531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-------~-~~~~~i~~~~~~~~p~~---~~~ 599 (635)
T 4fl3_A 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-------S-EVTAMLEKGERMGCPAG---CPR 599 (635)
T ss_dssp ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-------H-HHHHHHHTTCCCCCCTT---CCH
T ss_pred CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-------H-HHHHHHHcCCCCCCCCC---CCH
Confidence 2346788999999999999999999999999999998 9999975321 1 12222222222222211 334
Q ss_pred HHHHHHhhccCcCCCC
Q 047576 587 LVSTISFACLQSNPKS 602 (602)
Q Consensus 587 ~l~~l~~~Cl~~dP~e 602 (602)
.+.+++..||+.||++
T Consensus 600 ~l~~li~~cl~~dP~~ 615 (635)
T 4fl3_A 600 EMYDLMNLCWTYDVEN 615 (635)
T ss_dssp HHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHcCCCHhH
Confidence 5889999999999985
No 230
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.96 E-value=3.9e-30 Score=259.69 Aligned_cols=213 Identities=18% Similarity=0.264 Sum_probs=155.3
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHh----------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQ---------------------- 424 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~---------------------- 424 (602)
.++|...+.||+|+||.||+|+.. +++.||+|++........ ....+.+|+.++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV-DEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSH-HHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccH-HHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 467888999999999999999875 799999999875433211 23456677776644
Q ss_pred ----hhcCccccccccccc-hhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCC--------------
Q 047576 425 ----MERGSLFRILHNDAE-AVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSK-------------- 485 (602)
Q Consensus 425 ----l~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~-------------- 485 (602)
+++++|.+++..... ...+++.++..++.|++.||+||| +.+|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 444455555443211 134789999999999999999999 7899999999999999844
Q ss_pred -----CcceeecccccccccCCCCCccccccccccccccccccC-cCCccchhHHHHHHHHHHHcCCCCCCCCcccccCC
Q 047576 486 -----LEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTM-VMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY 559 (602)
Q Consensus 486 -----~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~ 559 (602)
..+||+|||.+....... ...||+.|+|||++.+. .++.++||||||+++|+|++|..|+....
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------ 235 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD------ 235 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH------
T ss_pred ccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh------
Confidence 478999999998765432 24589999999998876 56689999999999999999998865321
Q ss_pred CcccchhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 560 DPKIMLIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 560 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.....+... .. ....+.+++.+||+.||++
T Consensus 236 ----~~~~~~~~~~~~~~-~~---~~~~~~~li~~~l~~dp~~ 270 (289)
T 1x8b_A 236 ----QWHEIRQGRLPRIP-QV---LSQEFTELLKVMIHPDPER 270 (289)
T ss_dssp ----HHHHHHTTCCCCCS-SC---CCHHHHHHHHHHTCSSGGG
T ss_pred ----HHHHHHcCCCCCCC-cc---cCHHHHHHHHHHhCCCccc
Confidence 11222222222111 11 1234788999999999974
No 231
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.96 E-value=2.9e-30 Score=263.12 Aligned_cols=220 Identities=21% Similarity=0.324 Sum_probs=160.2
Q ss_pred CCccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc--------
Q 047576 367 TPRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND-------- 437 (602)
Q Consensus 367 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~-------- 437 (602)
..++|.....||+|+||.||+|+.. +++.||+|++...... ..+.+.+|+.++..+.|+++..++...
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 93 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEE---ELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWI 93 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----C---CHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHH---HHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEE
Confidence 3567999999999999999999875 5899999998654322 346788899999777777766654311
Q ss_pred ---------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCC
Q 047576 438 ---------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD 502 (602)
Q Consensus 438 ---------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~ 502 (602)
.....+++.++..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 94 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (302)
T 2j7t_A 94 MIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170 (302)
T ss_dssp EEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred EEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence 01234789999999999999999999 789999999999999999999999999987644322
Q ss_pred CCCccccccccccccccccc-----cCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCC-C
Q 047576 503 SSNQTLLAGSYGYIAPELAY-----TMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPP-P 576 (602)
Q Consensus 503 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~-~ 576 (602)
........|++.|+|||++. +..++.++||||||+++|+|++|+.||...... .....+.....+. .
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~ 243 (302)
T 2j7t_A 171 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-------RVLLKIAKSDPPTLL 243 (302)
T ss_dssp HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHSCCCCCS
T ss_pred ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH-------HHHHHHhccCCcccC
Confidence 11222356899999999883 566889999999999999999999999754321 1112222221111 1
Q ss_pred CChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 577 VDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 577 ~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.... ....+.+++..||+.||++
T Consensus 244 ~~~~---~~~~l~~li~~~l~~dp~~ 266 (302)
T 2j7t_A 244 TPSK---WSVEFRDFLKIALDKNPET 266 (302)
T ss_dssp SGGG---SCHHHHHHHHHHSCSCTTT
T ss_pred Cccc---cCHHHHHHHHHHcccChhh
Confidence 1111 2234789999999999975
No 232
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.96 E-value=2.4e-30 Score=262.01 Aligned_cols=208 Identities=18% Similarity=0.346 Sum_probs=154.0
Q ss_pred CccccCcccccccccccceeeecCC-C-------cEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccc--------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPN-G-------RVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLF-------- 431 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~-g-------~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~-------- 431 (602)
.++|...+.||+|+||.||+|+... + ..||+|++...... ..+.+.+|+.++..+.|+++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRN---YSESFFEAASMMSKLSHKHLVLNYGVCVC 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGG---GHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHH---HHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence 4678899999999999999997642 3 47999998654332 346788899988555555444
Q ss_pred -----------------cccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCc-------
Q 047576 432 -----------------RILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLE------- 487 (602)
Q Consensus 432 -----------------~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~------- 487 (602)
+++.. ....+++..+..++.|++.||+||| +++|+||||||+||+++.++.
T Consensus 84 ~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~ 158 (289)
T 4fvq_A 84 GDENILVQEFVKFGSLDTYLKK--NKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPP 158 (289)
T ss_dssp TTCCEEEEECCTTCBHHHHHHH--TGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred CCCCEEEEECCCCCCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccc
Confidence 44432 1233889999999999999999999 789999999999999998877
Q ss_pred -ceeecccccccccCCCCCcccccccccccccccccc-CcCCccchhHHHHHHHHHHHcCCCC-CCCCcccccCCCcccc
Q 047576 488 -AFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYT-MVMTEKYDVYSFGVVTLEVLMGKHP-RDLHSTLSSSYDPKIM 564 (602)
Q Consensus 488 -~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~P-f~~~~~~~~~~~~~~~ 564 (602)
+||+|||.+..... .....|++.|+|||++.+ ..++.++||||||+++|||++|..| |..... . .
T Consensus 159 ~~kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~-------~-~ 226 (289)
T 4fvq_A 159 FIKLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS-------Q-R 226 (289)
T ss_dssp EEEECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-------H-H
T ss_pred eeeeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch-------H-H
Confidence 99999999865432 233568899999999987 6789999999999999999996554 432211 1 1
Q ss_pred hhhhhc--cCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 565 LIDVLD--QRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 565 ~~~~~d--~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
...... ..++.+.+ ..+.+++..||+.||++
T Consensus 227 ~~~~~~~~~~~~~~~~-------~~l~~li~~~l~~dp~~ 259 (289)
T 4fvq_A 227 KLQFYEDRHQLPAPKA-------AELANLINNCMDYEPDH 259 (289)
T ss_dssp HHHHHHTTCCCCCCSS-------CTTHHHHHHHSCSSGGG
T ss_pred HHHHhhccCCCCCCCC-------HHHHHHHHHHcCCChhH
Confidence 111111 22222222 23778999999999974
No 233
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.96 E-value=2.5e-30 Score=268.59 Aligned_cols=220 Identities=24% Similarity=0.361 Sum_probs=158.2
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHH-HHhhhcCccccccc----------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQV-LSQMERGSLFRILH---------- 435 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~i-l~~l~~gsL~~~l~---------- 435 (602)
.++|.....||+|+||.||+|+. .+|+.||||++....... ....+..|..+ +..+.|+++..++.
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ--EQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCH--HHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcH--HHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 46788899999999999999986 579999999987653321 22344445554 44445544443322
Q ss_pred --------------cc-cchhhhcHHHHHHHHHHHHHHHHHhhhcCCC-CeEEeCCCCCCeeeCCCCcceeecccccccc
Q 047576 436 --------------ND-AEAVELDWAKRVNIVKAMAHALAYLHHDCSP-SVVHRDISSNNILLNSKLEAFVADFGTARLL 499 (602)
Q Consensus 436 --------------~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~ivH~DLkp~NILld~~~~~kL~DFG~a~~~ 499 (602)
.. .....+++..+..++.||+.||+||| +. +|+||||||+||+++.++.+||+|||++...
T Consensus 128 v~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 128 CMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp EECCCSEEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred EHHHhhCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 11 01235889999999999999999999 65 9999999999999999999999999999876
Q ss_pred cCCCCCcccccccccccccccccc----CcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCC
Q 047576 500 HADSSNQTLLAGSYGYIAPELAYT----MVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPP 575 (602)
Q Consensus 500 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~ 575 (602)
.... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||+.... ....+..++....+.
T Consensus 205 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~------~~~~~~~~~~~~~~~ 277 (340)
T 3an0_A 205 VDSV-AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT------PFQQLKQVVEEPSPQ 277 (340)
T ss_dssp SCHH-HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC------HHHHHHHHHHSCCCC
T ss_pred cccc-ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc------hHHHHHHHhcCCCCC
Confidence 4321 1223468999999999643 4688999999999999999999999974221 112223333332221
Q ss_pred CCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 576 PVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 576 ~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
..... ....+.+++.+||+.||++
T Consensus 278 ~~~~~---~~~~~~~li~~~l~~dp~~ 301 (340)
T 3an0_A 278 LPADK---FSAEFVDFTSQCLKKNSKE 301 (340)
T ss_dssp CCGGG---SCHHHHHHHHHHTCSSGGG
T ss_pred CCccc---CCHHHHHHHHHHccCCccc
Confidence 11111 2344889999999999974
No 234
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.96 E-value=2.8e-30 Score=261.50 Aligned_cols=219 Identities=25% Similarity=0.324 Sum_probs=155.3
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccc-----------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILH----------- 435 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~----------- 435 (602)
.++|...+.||+|+||.||+|+. .++..||+|++...... ...+.+.+|++++..+.|+++..++.
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 98 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ--VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV 98 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc--hhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence 36789999999999999999986 46889999998654322 12456788999987666666555432
Q ss_pred --------------ccc-chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeee---CCCCcceeecccccc
Q 047576 436 --------------NDA-EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILL---NSKLEAFVADFGTAR 497 (602)
Q Consensus 436 --------------~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILl---d~~~~~kL~DFG~a~ 497 (602)
... ....+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++.
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 110 1234888999999999999999999 7899999999999999 456789999999998
Q ss_pred cccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCC
Q 047576 498 LLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPV 577 (602)
Q Consensus 498 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 577 (602)
...... ......|++.|+|||++. ..++.++||||+|+++|||++|+.||........ ........+......
T Consensus 176 ~~~~~~-~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~-----~~~~~~~~~~~~~~~ 248 (285)
T 3is5_A 176 LFKSDE-HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV-----QQKATYKEPNYAVEC 248 (285)
T ss_dssp C-----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-----HHHHHHCCCCCCC--
T ss_pred ecCCcc-cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH-----HhhhccCCccccccc
Confidence 765432 233457899999999875 4678999999999999999999999975321100 000011111111110
Q ss_pred ChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 578 DRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 578 ~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.. ....+.+++.+|++.||++
T Consensus 249 ~~----~~~~~~~li~~~L~~dP~~ 269 (285)
T 3is5_A 249 RP----LTPQAVDLLKQMLTKDPER 269 (285)
T ss_dssp CC----CCHHHHHHHHHHTCSCTTT
T ss_pred Cc----CCHHHHHHHHHHccCChhh
Confidence 00 1234778999999999975
No 235
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.96 E-value=2.8e-30 Score=270.40 Aligned_cols=178 Identities=24% Similarity=0.324 Sum_probs=143.2
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|.....||+|+||.||+|+.. +++.||+|++...... ...+.+.+|+.++..+.|+++..++...
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP--AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCH--HHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCH--HHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 467999999999999999999865 7899999998755322 2346788899888666555554443211
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCC-CeEEeCCCCCCeeeCCCCcceeecccccccccCCC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSP-SVVHRDISSNNILLNSKLEAFVADFGTARLLHADS 503 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~ 503 (602)
.....+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||++.......
T Consensus 110 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 186 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 186 (360)
T ss_dssp ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC
T ss_pred EECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCccccccc
Confidence 01234788999999999999999999 54 89999999999999999999999999987654322
Q ss_pred CCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 504 SNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 504 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
.....||+.|+|||++.+..++.++||||||+++|+|+||+.||...
T Consensus 187 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 187 --ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp ------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred --ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 22357899999999999999999999999999999999999999753
No 236
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.96 E-value=2.2e-30 Score=266.02 Aligned_cols=220 Identities=18% Similarity=0.258 Sum_probs=158.7
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|...+.||+|+||.||+|+. .+++.||||++...... ..+.+.+|+.++..+.|+++..++...
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQ---DREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHH---HHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHH---HHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence 45799999999999999999986 57899999988654322 346788899999777776665543211
Q ss_pred --------------------c-chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccc
Q 047576 438 --------------------A-EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTA 496 (602)
Q Consensus 438 --------------------~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a 496 (602)
. ....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 0 1234789999999999999999999 789999999999999999999999999988
Q ss_pred ccccCCCCC---------ccccccccccccccccccCc---CCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccc
Q 047576 497 RLLHADSSN---------QTLLAGSYGYIAPELAYTMV---MTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIM 564 (602)
Q Consensus 497 ~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~ 564 (602)
......... .....|++.|+|||++.+.. ++.++||||||+++|||++|+.||+..... ...
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~ 255 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK------GDS 255 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT------TSC
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc------cch
Confidence 765321111 11235789999999987543 688999999999999999999999632110 001
Q ss_pred hhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 565 LIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 565 ~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+......+.... ....+.+++.+||+.||++
T Consensus 256 ~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~ 290 (317)
T 2buj_A 256 VALAVQNQLSIPQSPR---HSSALWQLLNSMMTVDPHQ 290 (317)
T ss_dssp HHHHHHCC--CCCCTT---SCHHHHHHHHHHTCSSGGG
T ss_pred hhHHhhccCCCCcccc---CCHHHHHHHHHHhhcChhh
Confidence 1111222222111111 2234889999999999974
No 237
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.96 E-value=6.4e-30 Score=264.05 Aligned_cols=219 Identities=26% Similarity=0.338 Sum_probs=156.0
Q ss_pred CccccCcccccccccccceeeec------CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL------PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFR--------- 432 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~--------- 432 (602)
.++|...+.||+|+||.||+|+. .+++.||||++...... .....+.+|+.++..+.|+++..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCH--HHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccch--hhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 46799999999999999999984 35778999999754332 23456788998886555555444
Q ss_pred ----------------cccccc----chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCC---CCcce
Q 047576 433 ----------------ILHNDA----EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS---KLEAF 489 (602)
Q Consensus 433 ----------------~l~~~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~---~~~~k 489 (602)
++.... ....+++.++..++.|++.||.||| +.+|+||||||+||+++. +..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEE
Confidence 333211 1134788999999999999999999 789999999999999984 44699
Q ss_pred eecccccccccCCCC--CccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchh
Q 047576 490 VADFGTARLLHADSS--NQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLI 566 (602)
Q Consensus 490 L~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~ 566 (602)
|+|||++........ ......|++.|+|||++.+..++.++||||||+++|+|+| |+.||..... .....
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-------~~~~~ 256 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-------QEVLE 256 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------HHHHH
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH-------HHHHH
Confidence 999999986543321 1223467889999999998899999999999999999998 9999974321 11111
Q ss_pred hhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 567 DVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 567 ~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.+...... ..... ....+.+++..||+.||++
T Consensus 257 ~~~~~~~~-~~~~~---~~~~l~~li~~~l~~dp~~ 288 (327)
T 2yfx_A 257 FVTSGGRM-DPPKN---CPGPVYRIMTQCWQHQPED 288 (327)
T ss_dssp HHHTTCCC-CCCTT---CCHHHHHHHHHHTCSSGGG
T ss_pred HHhcCCCC-CCCCC---CCHHHHHHHHHHhcCChhh
Confidence 22221111 11111 2234788999999999974
No 238
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.96 E-value=4.9e-30 Score=261.31 Aligned_cols=223 Identities=23% Similarity=0.347 Sum_probs=142.6
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcC------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERG------------------ 428 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~g------------------ 428 (602)
.++|...+.||+|+||.||+|+.. +++.||||++...... ...+.+.+|+.++..+.|+
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ--TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcc--hhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 467999999999999999999864 6889999998654322 2345677888877444444
Q ss_pred -------ccccccccc-----cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccc
Q 047576 429 -------SLFRILHND-----AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTA 496 (602)
Q Consensus 429 -------sL~~~l~~~-----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a 496 (602)
+|.+++... .....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 444444321 01234889999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCC-----Ccccccccccccccccccc-CcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCC---Cc--ccch
Q 047576 497 RLLHADSS-----NQTLLAGSYGYIAPELAYT-MVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSY---DP--KIML 565 (602)
Q Consensus 497 ~~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~---~~--~~~~ 565 (602)
........ ......|++.|+|||++.+ ..++.++||||||+++|||++|+.||.......... .. ....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 248 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE 248 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTT
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccc
Confidence 87643221 1223568999999999876 568999999999999999999999997543221100 00 0000
Q ss_pred hhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 566 IDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 566 ~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....++...... ...+.+++.+||+.||++
T Consensus 249 ~~~~~~~~~~~~-------~~~~~~li~~~l~~dp~~ 278 (303)
T 2vwi_A 249 TGVQDKEMLKKY-------GKSFRKMISLCLQKDPEK 278 (303)
T ss_dssp C-----CCCCCC-------CHHHHHHHHHHCCSSGGG
T ss_pred cccccchhhhhh-------hHHHHHHHHHHccCChhh
Confidence 001111111121 234788999999999974
No 239
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.96 E-value=7.5e-30 Score=264.81 Aligned_cols=226 Identities=23% Similarity=0.373 Sum_probs=160.0
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHh--hhcCcccccccccc-------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQ--MERGSLFRILHNDA------- 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~--l~~gsL~~~l~~~~------- 438 (602)
.++|...+.||+|+||.||+|+. +|+.||||++..... +.+.+|.+++.. +.|+++..++....
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~------~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 41 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE------RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGGH------HHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred cccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchhH------HHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 35789999999999999999998 589999999865432 345567776644 44544443322100
Q ss_pred ------------------chhhhcHHHHHHHHHHHHHHHHHhhhc-----CCCCeEEeCCCCCCeeeCCCCcceeecccc
Q 047576 439 ------------------EAVELDWAKRVNIVKAMAHALAYLHHD-----CSPSVVHRDISSNNILLNSKLEAFVADFGT 495 (602)
Q Consensus 439 ------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~-----~~~~ivH~DLkp~NILld~~~~~kL~DFG~ 495 (602)
....+++.++..++.|++.||+|||.. ++.+|+||||||+||+++.++.+||+|||+
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 193 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 193 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred eeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCC
Confidence 122478999999999999999999932 146999999999999999999999999999
Q ss_pred cccccCCCCC----ccccccccccccccccccC------cCCccchhHHHHHHHHHHHcC----------CCCCCCCccc
Q 047576 496 ARLLHADSSN----QTLLAGSYGYIAPELAYTM------VMTEKYDVYSFGVVTLEVLMG----------KHPRDLHSTL 555 (602)
Q Consensus 496 a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltG----------~~Pf~~~~~~ 555 (602)
+......... .....||+.|+|||++.+. .++.++||||||+++|||+|| +.||......
T Consensus 194 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~ 273 (342)
T 1b6c_B 194 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 273 (342)
T ss_dssp CEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred ceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcC
Confidence 9876543321 2335789999999998776 334789999999999999999 6777543211
Q ss_pred ccCCCcccchhhhhccCCCCCCChh--hHHHHHHHHHHHhhccCcCCCC
Q 047576 556 SSSYDPKIMLIDVLDQRLPPPVDRK--VIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 556 ~~~~~~~~~~~~~~d~~l~~~~~~~--~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.. ........+....+.+..... ..+....+.+++..||+.||++
T Consensus 274 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 320 (342)
T 1b6c_B 274 DP--SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAA 320 (342)
T ss_dssp SC--CHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGG
T ss_pred cc--cHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhh
Confidence 00 011111222333333322221 1246667999999999999974
No 240
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=2.5e-28 Score=263.71 Aligned_cols=224 Identities=24% Similarity=0.266 Sum_probs=203.5
Q ss_pred CCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-------cCCCcCEEECcCCcCCCCCchhhhCCCCCC
Q 047576 127 CFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLKNLI 199 (602)
Q Consensus 127 ~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 199 (602)
-.++++.|++. ++++.+..|..|+++++|++|+|++|+|++ .+++|++|+|++|+|++..+..|.++++|+
T Consensus 73 ~~~~l~~L~L~--~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 150 (452)
T 3zyi_A 73 IPSNTRYLNLM--ENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLR 150 (452)
T ss_dssp CCTTCSEEECC--SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCC
T ss_pred CCCCccEEECc--CCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCC
Confidence 34678888887 677888888999999999999999999873 478999999999999998888899999999
Q ss_pred EEEecCCCCCCCCcccccCcCCCceeeccc-ccCCCCcc-cccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCC
Q 047576 200 ELDVGDNSLIGPIPLTLSRLTSLKILILAQ-NQLSGLPQ-EIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCN 277 (602)
Q Consensus 200 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~ip~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 277 (602)
+|+|++|++++..+..|.++++|+.|++++ |.++.+|. .+.++++|++|+|++|++++. | .+..+++|++|+|++|
T Consensus 151 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N 228 (452)
T 3zyi_A 151 ELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGN 228 (452)
T ss_dssp EEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTS
T ss_pred EEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCC
Confidence 999999999987777899999999999999 45555665 688999999999999999964 4 4789999999999999
Q ss_pred cCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCc
Q 047576 278 QFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGR 354 (602)
Q Consensus 278 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 354 (602)
.+++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|++++|++...
T Consensus 229 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 229 HFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp CCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECS
T ss_pred cCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCC
Confidence 99999999999999999999999999998899999999999999999999988888899999999999999998654
No 241
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.96 E-value=2.6e-29 Score=262.44 Aligned_cols=178 Identities=31% Similarity=0.424 Sum_probs=145.0
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccccc-------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDAE------- 439 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~~------- 439 (602)
.++|.....||+|+||.||+|+. .+|+.||||++...... ....+.+.+|+.++..+.|+++..++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS-EIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSS-HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccc-hHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 46788899999999999999986 46899999998754332 2345678899999999888887765432110
Q ss_pred ------------------hhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 440 ------------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 440 ------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
...+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 102 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 102 YDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA 178 (353)
T ss_dssp CCCEEEEECCSEEGGGTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC---
T ss_pred eeEEEEeccccCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccCCCC
Confidence 124789999999999999999999 78999999999999999999999999999986543
Q ss_pred CCCCcccccccccccccccccc-CcCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 502 DSSNQTLLAGSYGYIAPELAYT-MVMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
. .....||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||...
T Consensus 179 ~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 227 (353)
T 3coi_A 179 E---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 227 (353)
T ss_dssp --------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSS
T ss_pred C---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 2 233578999999999877 67899999999999999999999999754
No 242
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.96 E-value=1.4e-29 Score=263.85 Aligned_cols=174 Identities=24% Similarity=0.385 Sum_probs=139.6
Q ss_pred CccccCcccccccccccceeeecC-CC-cEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCc------c---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NG-RVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGS------L--------- 430 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g-~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gs------L--------- 430 (602)
.++|.....||+|+||.||+|+.. ++ +.||+|+++.... ..+.+.+|+.++..+.+.+ +
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGK----YREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHH----HHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccccc----chhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 467999999999999999999864 34 7899999975432 2356677888776655432 1
Q ss_pred ---------------ccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeee-------------
Q 047576 431 ---------------FRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILL------------- 482 (602)
Q Consensus 431 ---------------~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILl------------- 482 (602)
.+.+... ....+++.++..++.||+.||+||| +.+|+||||||+||++
T Consensus 94 ~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 94 HGHMCIAFELLGKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp TTEEEEEEECCCCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-
T ss_pred CCeEEEEEeccCCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccccc
Confidence 1111110 1134889999999999999999999 8899999999999999
Q ss_pred ------CCCCcceeecccccccccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 483 ------NSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 483 ------d~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 56789999999999865432 23357899999999999999999999999999999999999999754
No 243
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.96 E-value=6.3e-30 Score=280.14 Aligned_cols=222 Identities=23% Similarity=0.295 Sum_probs=162.6
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHH----------HHHhhhhHhHHHHHHhhhcCcccccccc
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEE----------LAFIRSFRNEAQVLSQMERGSLFRILHN 436 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~----------~~~~~~~~~E~~il~~l~~gsL~~~l~~ 436 (602)
.++|...+.||+|+||.||+|+.. +++.||+|++....... ....+.+.+|+.++..+.|+++..++..
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467999999999999999999865 68899999987543221 1234568889999977777766654431
Q ss_pred c----------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCC---cceee
Q 047576 437 D----------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKL---EAFVA 491 (602)
Q Consensus 437 ~----------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~---~~kL~ 491 (602)
. .....+++.++..++.|++.||+||| +.+|+||||||+||+++.++ .+||+
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEEEC
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEEEE
Confidence 1 01234789999999999999999999 78999999999999998775 69999
Q ss_pred cccccccccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhcc
Q 047576 492 DFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ 571 (602)
Q Consensus 492 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~ 571 (602)
|||++....... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||..... ...+..+...
T Consensus 192 Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~ 262 (504)
T 3q5i_A 192 DFGLSSFFSKDY-KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND-------QDIIKKVEKG 262 (504)
T ss_dssp CCTTCEECCTTS-CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHC
T ss_pred ECCCCEEcCCCC-ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHcC
Confidence 999998765432 233457999999999876 4689999999999999999999999975321 2223333333
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 572 RLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 572 ~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
....+.. ........+.+++..|+++||++
T Consensus 263 ~~~~~~~-~~~~~s~~~~~li~~~L~~dp~~ 292 (504)
T 3q5i_A 263 KYYFDFN-DWKNISDEAKELIKLMLTYDYNK 292 (504)
T ss_dssp CCCCCHH-HHTTSCHHHHHHHHHHTCSSTTT
T ss_pred CCCCCcc-ccCCCCHHHHHHHHHHcCCChhH
Confidence 3322211 10112345889999999999975
No 244
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.96 E-value=6.1e-30 Score=264.22 Aligned_cols=218 Identities=24% Similarity=0.327 Sum_probs=155.7
Q ss_pred CccccCcccccccccccceeeecC-CCcE--EeeeccCCchhHHHHHhhhhHhHHHHHHhh-hc----------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRV--FALKKLNSPETEELAFIRSFRNEAQVLSQM-ER---------------- 427 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~--vavK~l~~~~~~~~~~~~~~~~E~~il~~l-~~---------------- 427 (602)
.++|.....||+|+||.||+|+.. ++.. ||+|.+...... ...+.+.+|+.++..+ .|
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 101 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK--DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 101 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccch--HHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence 467999999999999999999864 5554 499988643322 2346688899888555 44
Q ss_pred ---------Ccccccccccc-------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCC
Q 047576 428 ---------GSLFRILHNDA-------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSK 485 (602)
Q Consensus 428 ---------gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~ 485 (602)
++|.+++.... ....+++.++..++.|++.||+||| +.+|+||||||+||+++.+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~ 178 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGEN 178 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGG
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCC
Confidence 44444443321 1125889999999999999999999 7899999999999999999
Q ss_pred CcceeecccccccccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccc
Q 047576 486 LEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIM 564 (602)
Q Consensus 486 ~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~ 564 (602)
+.+||+|||+++...... ......+++.|+|||++.+..++.++||||||+++|||+| |+.||..... ...
T Consensus 179 ~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-------~~~ 250 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-------AEL 250 (327)
T ss_dssp GCEEECCTTCEESSCEEC-CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHH
T ss_pred CeEEEcccCcCccccccc-cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-------HHH
Confidence 999999999987543221 1222456789999999998889999999999999999998 9999975321 111
Q ss_pred hhhhhccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 565 LIDVLDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 565 ~~~~~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
...+. .....+.... ....+.+++.+||+.||++
T Consensus 251 ~~~~~-~~~~~~~~~~---~~~~l~~li~~~l~~dp~~ 284 (327)
T 1fvr_A 251 YEKLP-QGYRLEKPLN---CDDEVYDLMRQCWREKPYE 284 (327)
T ss_dssp HHHGG-GTCCCCCCTT---BCHHHHHHHHHHTCSSGGG
T ss_pred HHHhh-cCCCCCCCCC---CCHHHHHHHHHHccCChhh
Confidence 11111 1111111111 2234889999999999974
No 245
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.96 E-value=7e-30 Score=279.08 Aligned_cols=221 Identities=22% Similarity=0.284 Sum_probs=160.2
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.+.|...+.||+|+||.||+|+.. ++..||+|++....... .....+.+|+.++..+.|+++..++...
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST-SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc-hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 357899999999999999999865 68899999987554321 1245678899999777777766654321
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCC---CcceeecccccccccC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSK---LEAFVADFGTARLLHA 501 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~---~~~kL~DFG~a~~~~~ 501 (602)
.....+++.++..++.||+.||+||| +.+|+||||||+||+++.. +.+||+|||++.....
T Consensus 115 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 115 MECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 01234788999999999999999999 7899999999999999764 4599999999987654
Q ss_pred CCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhh
Q 047576 502 DSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
.. ......||+.|+|||++. ..++.++||||+||++|+|++|+.||..... ...+..+.......+.. ..
T Consensus 192 ~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~~~~~~~-~~ 261 (494)
T 3lij_A 192 QK-KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD-------QEILRKVEKGKYTFDSP-EW 261 (494)
T ss_dssp TB-CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCCCCCSG-GG
T ss_pred Cc-cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCCCCch-hc
Confidence 32 233457999999999876 4689999999999999999999999975321 12223333333221111 11
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
......+.+++.+|++.||++
T Consensus 262 ~~~s~~~~~li~~~L~~dp~~ 282 (494)
T 3lij_A 262 KNVSEGAKDLIKQMLQFDSQR 282 (494)
T ss_dssp TTSCHHHHHHHHHHTCSSTTT
T ss_pred ccCCHHHHHHHHHHCCCChhh
Confidence 112344789999999999975
No 246
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.96 E-value=1.4e-29 Score=264.76 Aligned_cols=179 Identities=22% Similarity=0.275 Sum_probs=132.5
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|...+.||+|+||.||+|+.. +|+.||||++..... ....+.+|+..+..+.|+++..++...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~ 97 (360)
T 3e3p_A 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR----FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRR 97 (360)
T ss_dssp HTTEEEC----------CEEEEETTTCCEEEEEEEECCTT----CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTT
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc----ccHHHHHHHHHHHhcCCCCcccHHHhhhcccccccc
Confidence 457999999999999999999864 689999998854432 123455667667777777776643211
Q ss_pred -----------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCC-CCcceeecc
Q 047576 438 -----------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS-KLEAFVADF 493 (602)
Q Consensus 438 -----------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~-~~~~kL~DF 493 (602)
.....+++..+..++.|++.|+.|||.+ +.+|+||||||+||+++. ++.+||+||
T Consensus 98 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~kl~Df 176 (360)
T 3e3p_A 98 DIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDF 176 (360)
T ss_dssp CEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEEEECCC
T ss_pred ceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcEEEeeC
Confidence 0122367788899999999999999944 679999999999999996 899999999
Q ss_pred cccccccCCCCCccccccccccccccccccCc-CCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 494 GTARLLHADSSNQTLLAGSYGYIAPELAYTMV-MTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 494 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
|++........ .....||+.|+|||++.+.. ++.++|||||||++|||+||+.||...
T Consensus 177 g~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~ 235 (360)
T 3e3p_A 177 GSAKKLSPSEP-NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGD 235 (360)
T ss_dssp TTCBCCCTTSC-CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCceecCCCCC-cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCC
Confidence 99987654332 23356899999999987654 899999999999999999999999754
No 247
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.96 E-value=1.1e-29 Score=286.00 Aligned_cols=224 Identities=23% Similarity=0.388 Sum_probs=194.8
Q ss_pred CccchhccccCCccccCCccCCCCCCCCEEECcCCcC-------------------------------------------
Q 047576 131 LESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRL------------------------------------------- 167 (602)
Q Consensus 131 L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i------------------------------------------- 167 (602)
++.|++. ++++.|.+|++|++|++|++|+|++|.+
T Consensus 83 V~~L~L~--~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~ 160 (636)
T 4eco_A 83 VTGLSLE--GFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSD 160 (636)
T ss_dssp EEEEECT--TSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred EEEEEec--CcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHH
Confidence 3444554 6788999999999999999999999955
Q ss_pred -----------------------------------c------ccCCCcCEEECcCCcCCCC-----------------Cc
Q 047576 168 -----------------------------------R------GRLTNLNYMSLSRNMLGGL-----------------LP 189 (602)
Q Consensus 168 -----------------------------------~------~~l~~L~~L~L~~N~l~~~-----------------~p 189 (602)
+ +.+++|++|+|++|.+++. +|
T Consensus 161 ~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip 240 (636)
T 4eco_A 161 LIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKT 240 (636)
T ss_dssp HHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT
T ss_pred HHHHHhhcCccccccccccccchhhhhhccccCCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCc
Confidence 1 2477899999999999986 88
Q ss_pred hhhh--CCCCCCEEEecCCCCCCCCcccccCcCCCceeeccccc-CCC--CcccccCC------CCCcEEEccCCCCCCC
Q 047576 190 QEIG--NLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQ-LSG--LPQEIGNL------KNLMLLDVGNNDIIGP 258 (602)
Q Consensus 190 ~~~~--~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~--ip~~~~~l------~~L~~L~L~~N~l~~~ 258 (602)
..++ ++++|++|+|++|++.|.+|..++++++|++|++++|+ +++ +|..++++ ++|++|++++|+++ .
T Consensus 241 ~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ 319 (636)
T 4eco_A 241 EDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-T 319 (636)
T ss_dssp SCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-S
T ss_pred hhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-c
Confidence 8888 99999999999999999999999999999999999998 887 88888776 89999999999998 7
Q ss_pred CCC--ccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCC-CCEEeCCCCCCCCCCCccc
Q 047576 259 IPS--TLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMED-LTWLDLSNNNIKGSIPGEI 335 (602)
Q Consensus 259 ~p~--~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~ 335 (602)
+|. .++.+++|++|++++|+++|.+| .++.+++|++|+|++|+++ .+|..+..+++ |+.|++++|+++ .+|..+
T Consensus 320 ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~ 396 (636)
T 4eco_A 320 FPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIF 396 (636)
T ss_dssp CCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCC
T ss_pred cCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhh
Confidence 888 88999999999999999998888 8888999999999999998 78888888988 999999999998 778877
Q ss_pred cccc--ccccccccCCcCCCccCCCCC
Q 047576 336 TKLS--RLDYLNLSGNKLSGRVPYSNK 360 (602)
Q Consensus 336 ~~l~--~L~~L~l~~N~l~g~~p~~~~ 360 (602)
..++ +|+.|++++|+++|.+|..+.
T Consensus 397 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 423 (636)
T 4eco_A 397 DAKSVSVMSAIDFSYNEIGSVDGKNFD 423 (636)
T ss_dssp CTTCSSCEEEEECCSSCTTTTTTCSSC
T ss_pred hhcccCccCEEECcCCcCCCcchhhhc
Confidence 7655 899999999999998887654
No 248
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=1.1e-28 Score=275.92 Aligned_cols=232 Identities=22% Similarity=0.245 Sum_probs=179.0
Q ss_pred cccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-------cCCCcCEEECcCCcCCCCCchhh
Q 047576 120 LSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEI 192 (602)
Q Consensus 120 l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~~L~L~~N~l~~~~p~~~ 192 (602)
++...++.+++|+.|++. ++.+.+..|..|+.+++|++|+|++|.|++ .+++|++|+|++|.|++..+..|
T Consensus 66 lp~~~~~~l~~L~~L~L~--~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~ 143 (597)
T 3oja_B 66 LPAALLDSFRQVELLNLN--DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIF 143 (597)
T ss_dssp ECTHHHHHCCCCSEEECT--TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred cCHHHHccCCCCcEEECC--CCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHh
Confidence 333335667788888876 566777777789999999999999998873 47889999999999997777778
Q ss_pred hCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcccccCCC-----------------------------
Q 047576 193 GNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEIGNLK----------------------------- 243 (602)
Q Consensus 193 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~----------------------------- 243 (602)
+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++++. +.++
T Consensus 144 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n 221 (597)
T 3oja_B 144 HNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDL--SLIPSLFHANVSYNLLSTLAIPIAVEELDASHN 221 (597)
T ss_dssp TTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCG--GGCTTCSEEECCSSCCSEEECCTTCSEEECCSS
T ss_pred ccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcCh--hhhhhhhhhhcccCccccccCCchhheeeccCC
Confidence 999999999999999998888889999999999999999888642 2222
Q ss_pred -----------CCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccC
Q 047576 244 -----------NLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIA 312 (602)
Q Consensus 244 -----------~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 312 (602)
+|+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|..|+.+++|+.|+|++|++++ +|..+.
T Consensus 222 ~l~~~~~~~~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~ 298 (597)
T 3oja_B 222 SINVVRGPVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQ 298 (597)
T ss_dssp CCCEEECSCCSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSS
T ss_pred cccccccccCCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccc
Confidence 34555555555554 2456777888888888888888778888888888888888888875 566667
Q ss_pred CCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccCCCC
Q 047576 313 SMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYSN 359 (602)
Q Consensus 313 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~ 359 (602)
.+++|+.|+|++|.++ .+|..+..+++|+.|++++|++++..+..+
T Consensus 299 ~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 344 (597)
T 3oja_B 299 PIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTH 344 (597)
T ss_dssp CCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTT
T ss_pred cCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcChhhc
Confidence 7888888888888887 567777788888888888888876543333
No 249
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.96 E-value=2e-29 Score=264.13 Aligned_cols=181 Identities=23% Similarity=0.282 Sum_probs=142.1
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchh--------HHHHHhhhhHhHHHHHHhhhcCccccccccc--
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPET--------EELAFIRSFRNEAQVLSQMERGSLFRILHND-- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~--------~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~-- 437 (602)
.++|...+.||+|+||.||+|+..+|+.||||++..... ......+.+.+|+.++..+.|+++..++...
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 100 (362)
T 3pg1_A 21 QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVH 100 (362)
T ss_dssp TCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEE
T ss_pred ccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEe
Confidence 568999999999999999999988899999998864321 1223446788999999999888877654321
Q ss_pred -------------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeec
Q 047576 438 -------------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVAD 492 (602)
Q Consensus 438 -------------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~D 492 (602)
.....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|
T Consensus 101 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~D 177 (362)
T 3pg1_A 101 FEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICD 177 (362)
T ss_dssp CCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred ccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEcCCCCEEEEe
Confidence 01124789999999999999999999 78999999999999999999999999
Q ss_pred ccccccccCCCCCcccccccccccccccccc-CcCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 493 FGTARLLHADSSNQTLLAGSYGYIAPELAYT-MVMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 493 FG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
||++....... ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 178 fg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 237 (362)
T 3pg1_A 178 FNLAREDTADA-NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS 237 (362)
T ss_dssp TTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cCccccccccc-ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCC
Confidence 99997654332 2233578999999999877 66899999999999999999999999754
No 250
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.96 E-value=5.3e-29 Score=261.60 Aligned_cols=175 Identities=19% Similarity=0.278 Sum_probs=137.4
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhh-----------cCccccccc
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME-----------RGSLFRILH 435 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~-----------~gsL~~~l~ 435 (602)
..+|...+.||+|+||.||+|+. .+++.||||++...... .+.+.+|+.++..+. |.++..++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY----TEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHH----HHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccc----hhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 45799999999999999999985 57899999999754432 345667777775554 333333221
Q ss_pred cc---------------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCC-CeEEeCCCCCCeeeC----
Q 047576 436 ND---------------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSP-SVVHRDISSNNILLN---- 483 (602)
Q Consensus 436 ~~---------------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~ivH~DLkp~NILld---- 483 (602)
.. .....+++..+..++.||+.||+||| ++ +|+||||||+||+++
T Consensus 94 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEET
T ss_pred HhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCC
Confidence 10 01233788999999999999999999 66 999999999999994
Q ss_pred --CCCcceeecccccccccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 484 --SKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 484 --~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
..+.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 238 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEHY---TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBCC---CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred CcCcceEEEcccccccccCCCC---CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 44589999999998765432 2347899999999999999999999999999999999999999753
No 251
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.96 E-value=6.7e-30 Score=265.23 Aligned_cols=223 Identities=22% Similarity=0.280 Sum_probs=138.5
Q ss_pred CCCccccCc-ccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHH-----------------------
Q 047576 366 PTPRKIDSK-YCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQ----------------------- 420 (602)
Q Consensus 366 p~t~~f~~~-~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~----------------------- 420 (602)
...++|... +.||+|+||.||+|+.. +|+.||||++...... .+.+..+..
T Consensus 25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA----RQEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHH----HHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHH----HHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 346778884 57999999999999875 6899999998654322 122222222
Q ss_pred ---HHHhhhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCC---CCcceeeccc
Q 047576 421 ---VLSQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS---KLEAFVADFG 494 (602)
Q Consensus 421 ---il~~l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~---~~~~kL~DFG 494 (602)
++||+++|+|.+++.... ...+++.++..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 226667777777776532 235899999999999999999999 789999999999999976 4559999999
Q ss_pred ccccccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCC
Q 047576 495 TARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLP 574 (602)
Q Consensus 495 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~ 574 (602)
++....... .....||+.|+|||++.+..++.++||||||+++|+|++|+.||............... ........+
T Consensus 177 ~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~ 253 (336)
T 3fhr_A 177 FAKETTQNA--LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR-IRLGQYGFP 253 (336)
T ss_dssp TCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------CCC
T ss_pred cceeccccc--cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHh-hhccccccC
Confidence 998664322 23356899999999998888999999999999999999999999753321110000000 000111111
Q ss_pred CCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 575 PPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 575 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.+.... ....+.+++.+|++.||++
T Consensus 254 ~~~~~~---~~~~~~~li~~~L~~dP~~ 278 (336)
T 3fhr_A 254 NPEWSE---VSEDAKQLIRLLLKTDPTE 278 (336)
T ss_dssp TTTSTT---CCHHHHHHHHHHSCSSGGG
T ss_pred chhhcc---CCHHHHHHHHHHCCCChhH
Confidence 111111 2334789999999999974
No 252
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.96 E-value=4.3e-28 Score=243.58 Aligned_cols=183 Identities=26% Similarity=0.343 Sum_probs=150.2
Q ss_pred CcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcc-cccCCCCCcEEEcc
Q 047576 173 NLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQ-EIGNLKNLMLLDVG 251 (602)
Q Consensus 173 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~L~ 251 (602)
+|++|+|++|++++..+..|+++++|++|+|++|++++..+..|.++++|++|++++|+++++|. .+.++++|++|+++
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 45556666666666666788888888888888888886666667888888888888888888654 56788888888998
Q ss_pred CCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCC
Q 047576 252 NNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSI 331 (602)
Q Consensus 252 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 331 (602)
+|++++..|..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVP 197 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCC
Confidence 88888887788888888999999999888777767888888999999999888777777888889999999999988777
Q ss_pred CcccccccccccccccCCcCCCcc
Q 047576 332 PGEITKLSRLDYLNLSGNKLSGRV 355 (602)
Q Consensus 332 p~~~~~l~~L~~L~l~~N~l~g~~ 355 (602)
+..+..+++|+.|++++|++...-
T Consensus 198 ~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 198 EGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCSS
T ss_pred HHHhccccCCCEEEecCCCeeCCC
Confidence 777888888999999999887654
No 253
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.96 E-value=1.6e-29 Score=259.33 Aligned_cols=180 Identities=21% Similarity=0.293 Sum_probs=140.3
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|...+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+.++..+.|+++..++...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSH---HHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCCh---HHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 467889999999999999999875 589999999865543 2456788999999999988887764210
Q ss_pred -------------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeC-CCCcceee
Q 047576 438 -------------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLN-SKLEAFVA 491 (602)
Q Consensus 438 -------------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld-~~~~~kL~ 491 (602)
.....+++..+..++.|++.||+||| +.+|+||||||+||+++ .++.+||+
T Consensus 87 ~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp ----CCSCSEEEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred ccccccccCceeEEeeccCCCHHHHhhcCCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 01234788999999999999999999 78999999999999997 56799999
Q ss_pred cccccccccCCC---CCcccccccccccccccccc-CcCCccchhHHHHHHHHHHHcCCCCCCCCc
Q 047576 492 DFGTARLLHADS---SNQTLLAGSYGYIAPELAYT-MVMTEKYDVYSFGVVTLEVLMGKHPRDLHS 553 (602)
Q Consensus 492 DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~Pf~~~~ 553 (602)
|||+++...... .......++..|+|||++.+ ..++.++||||||+++|||+||+.||....
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 229 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC
Confidence 999998764321 11223457899999998865 678999999999999999999999997543
No 254
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.96 E-value=2.6e-29 Score=258.96 Aligned_cols=180 Identities=28% Similarity=0.369 Sum_probs=144.3
Q ss_pred CccccCcccccccccccceeeec--CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh---hcCccccccccc-----
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL--PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM---ERGSLFRILHND----- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l---~~gsL~~~l~~~----- 437 (602)
.++|.....||+|+||.||+|+. .+|+.||+|++....... .....+.+|+.++..+ .|+++..++...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc-cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 46799999999999999999986 468899999986443211 1223566777777655 577666554211
Q ss_pred -----------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccc
Q 047576 438 -----------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFG 494 (602)
Q Consensus 438 -----------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG 494 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 89 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Dfg 165 (326)
T 1blx_A 89 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFG 165 (326)
T ss_dssp SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred CCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecCc
Confidence 00123789999999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCC
Q 047576 495 TARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLH 552 (602)
Q Consensus 495 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~ 552 (602)
.+....... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||...
T Consensus 166 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 222 (326)
T 1blx_A 166 LARIYSFQM-ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS 222 (326)
T ss_dssp SCCCCCGGG-GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccCCC-CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC
Confidence 997654322 223356899999999999999999999999999999999999999754
No 255
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.96 E-value=5.2e-30 Score=264.10 Aligned_cols=210 Identities=21% Similarity=0.306 Sum_probs=159.2
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHH---HHHhhhhHhHHHHHHhhhc--Cccccccccc----
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEE---LAFIRSFRNEAQVLSQMER--GSLFRILHND---- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~---~~~~~~~~~E~~il~~l~~--gsL~~~l~~~---- 437 (602)
.++|.....||+|+||.||+|+. .+++.||||++....... ....+.+.+|+.++..+.+ .++..++...
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 56799999999999999999975 578999999986543221 0123567789998877753 4444433210
Q ss_pred -------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeC-CCCcceeecccccc
Q 047576 438 -------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLN-SKLEAFVADFGTAR 497 (602)
Q Consensus 438 -------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld-~~~~~kL~DFG~a~ 497 (602)
.....+++..+..++.|++.||+||| +.+|+||||||+||+++ .++.+||+|||++.
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~ 198 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGA 198 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred cEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence 01234788999999999999999999 78999999999999999 78999999999998
Q ss_pred cccCCCCCccccccccccccccccccCcC-CccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCC--C
Q 047576 498 LLHADSSNQTLLAGSYGYIAPELAYTMVM-TEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRL--P 574 (602)
Q Consensus 498 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l--~ 574 (602)
..... ......||+.|+|||++.+..+ +.++||||||+++|||+||+.||..... +..... +
T Consensus 199 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------------~~~~~~~~~ 263 (320)
T 3a99_A 199 LLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------------IIRGQVFFR 263 (320)
T ss_dssp ECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------------HHHCCCCCS
T ss_pred ccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-------------hhccccccc
Confidence 76533 2233568999999999887765 6889999999999999999999974321 111111 1
Q ss_pred CCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 575 PPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 575 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
...+ ..+.+++.+||+.||++
T Consensus 264 ~~~~-------~~~~~li~~~l~~dp~~ 284 (320)
T 3a99_A 264 QRVS-------SECQHLIRWCLALRPSD 284 (320)
T ss_dssp SCCC-------HHHHHHHHHHTCSSGGG
T ss_pred ccCC-------HHHHHHHHHHccCChhh
Confidence 2222 23788999999999974
No 256
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=3.7e-28 Score=245.89 Aligned_cols=228 Identities=23% Similarity=0.239 Sum_probs=110.8
Q ss_pred CCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-------cCCCcCEEECcCCc-CCCCCchhhhCCCCCC
Q 047576 128 FPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNM-LGGLLPQEIGNLKNLI 199 (602)
Q Consensus 128 l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~ 199 (602)
.++++.|++. ++++.+..+..|+++++|++|+|++|++.+ .+++|++|+|++|. ++...|..|..+++|+
T Consensus 31 ~~~l~~L~l~--~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~ 108 (285)
T 1ozn_A 31 PAASQRIFLH--GNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLH 108 (285)
T ss_dssp CTTCSEEECT--TSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCC
T ss_pred CCCceEEEee--CCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCC
Confidence 3455555544 334444333455555555555555555542 24455555555554 4444444555555555
Q ss_pred EEEecCCCCCCCCcccccCcCCCceeecccccCCCCcc-cccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCc
Q 047576 200 ELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQ-EIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQ 278 (602)
Q Consensus 200 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 278 (602)
+|+|++|++++..|..+.++++|++|++++|+++++|. .++++++|+.|+|++|++++..+..+..+++|++|++++|.
T Consensus 109 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 188 (285)
T 1ozn_A 109 TLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNR 188 (285)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCc
Confidence 55555555554444445555555555555555555332 24445555555555555554444445555555555555555
Q ss_pred CCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccCCC
Q 047576 279 FNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYS 358 (602)
Q Consensus 279 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~ 358 (602)
+++..|..+..+++|+.|+|++|++++..+..+..+++|+.|++++|.++...+.. .-...++.+..+.|.+.+..|..
T Consensus 189 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 189 VAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGG
T ss_pred ccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchH
Confidence 55544555555555555555555555444444555555555555555554332211 11122333444444444444443
No 257
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.96 E-value=4.3e-28 Score=263.56 Aligned_cols=254 Identities=21% Similarity=0.203 Sum_probs=212.5
Q ss_pred CCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-------cCCCc
Q 047576 102 GSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNL 174 (602)
Q Consensus 102 ~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L 174 (602)
.++..|+++...+. .+..-.|+.+++|+.|++. .+.+.+..+..|+++++|++|+|++|++.+ .+++|
T Consensus 56 ~~L~~L~L~~n~i~---~~~~~~~~~l~~L~~L~L~--~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L 130 (477)
T 2id5_A 56 PHLEELELNENIVS---AVEPGAFNNLFNLRTLGLR--SNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNL 130 (477)
T ss_dssp TTCCEEECTTSCCC---EECTTTTTTCTTCCEEECC--SSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred CCCCEEECCCCccC---EeChhhhhCCccCCEEECC--CCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccC
Confidence 45778888654332 2333356667777777765 444444334568999999999999999873 47899
Q ss_pred CEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCC-cccccCCCCCcEEEccCC
Q 047576 175 NYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGL-PQEIGNLKNLMLLDVGNN 253 (602)
Q Consensus 175 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~i-p~~~~~l~~L~~L~L~~N 253 (602)
++|+|++|.+++..+..|.++++|++|+|++|++++..+..+.++++|+.|+|++|.++++ +..+.++++|+.|++++|
T Consensus 131 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~ 210 (477)
T 2id5_A 131 KSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHW 210 (477)
T ss_dssp CEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECC
T ss_pred CEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCC
Confidence 9999999999999999999999999999999999987777899999999999999999995 557899999999999999
Q ss_pred CCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCc
Q 047576 254 DIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPG 333 (602)
Q Consensus 254 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 333 (602)
.+.+.+|.......+|++|++++|++++..+..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..|.
T Consensus 211 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 290 (477)
T 2id5_A 211 PYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPY 290 (477)
T ss_dssp TTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTT
T ss_pred ccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHH
Confidence 98888888777777999999999999876667889999999999999999988888899999999999999999988899
Q ss_pred ccccccccccccccCCcCCCccCCCCC
Q 047576 334 EITKLSRLDYLNLSGNKLSGRVPYSNK 360 (602)
Q Consensus 334 ~~~~l~~L~~L~l~~N~l~g~~p~~~~ 360 (602)
.+..+++|+.|++++|++++..+..+.
T Consensus 291 ~~~~l~~L~~L~L~~N~l~~~~~~~~~ 317 (477)
T 2id5_A 291 AFRGLNYLRVLNVSGNQLTTLEESVFH 317 (477)
T ss_dssp TBTTCTTCCEEECCSSCCSCCCGGGBS
T ss_pred HhcCcccCCEEECCCCcCceeCHhHcC
Confidence 999999999999999999886665443
No 258
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.96 E-value=7.9e-29 Score=275.37 Aligned_cols=178 Identities=24% Similarity=0.353 Sum_probs=143.1
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccc-------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRI------------- 433 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~------------- 433 (602)
..+|...+.||+|+||.||+|+.. +|+.||||++...... ...+.+.+|+.++..+.|+++..+
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~--~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSP--KNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCH--HHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCH--HHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 367999999999999999999874 6899999998764322 345678889999877666665443
Q ss_pred ------------------cccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCc---ceeec
Q 047576 434 ------------------LHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLE---AFVAD 492 (602)
Q Consensus 434 ------------------l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~---~kL~D 492 (602)
+........+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcc
Confidence 222122224788899999999999999999 789999999999999987664 89999
Q ss_pred ccccccccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCC
Q 047576 493 FGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDL 551 (602)
Q Consensus 493 FG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~ 551 (602)
||.+........ .....|++.|+|||++.+..++.++||||+|+++|+|++|+.||..
T Consensus 168 FG~a~~~~~~~~-~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~ 225 (676)
T 3qa8_A 168 LGYAKELDQGEL-CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225 (676)
T ss_dssp CCCCCBTTSCCC-CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccccccc-cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 999987654332 3345799999999999999999999999999999999999999965
No 259
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=7.4e-28 Score=259.16 Aligned_cols=225 Identities=24% Similarity=0.268 Sum_probs=202.6
Q ss_pred CCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-------cCCCcCEEECcCCcCCCCCchhhhCCCC
Q 047576 125 FSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLKN 197 (602)
Q Consensus 125 ~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 197 (602)
.+-.++++.|++. .+++.+..+..|.++++|++|+|++|+|++ .+++|++|+|++|+|++..+..|..+++
T Consensus 60 ~~~~~~l~~L~L~--~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 137 (440)
T 3zyj_A 60 DGISTNTRLLNLH--ENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK 137 (440)
T ss_dssp SCCCTTCSEEECC--SCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSS
T ss_pred CCCCCCCcEEEcc--CCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhcccc
Confidence 3445678888876 667777777899999999999999999873 4899999999999999888889999999
Q ss_pred CCEEEecCCCCCCCCcccccCcCCCceeecccc-cCCCCcc-cccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCC
Q 047576 198 LIELDVGDNSLIGPIPLTLSRLTSLKILILAQN-QLSGLPQ-EIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLS 275 (602)
Q Consensus 198 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~~ip~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 275 (602)
|++|+|++|++++..+..|.++++|++|+|++| .++.+|. .+.++++|++|+|++|+++ .+| .+..+++|++|+|+
T Consensus 138 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls 215 (440)
T 3zyj_A 138 LKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLS 215 (440)
T ss_dssp CCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECT
T ss_pred CceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECC
Confidence 999999999999888889999999999999995 5555654 6899999999999999998 455 47899999999999
Q ss_pred CCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCC
Q 047576 276 CNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSG 353 (602)
Q Consensus 276 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 353 (602)
+|.+++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..+..+..+++|+.|++++|++..
T Consensus 216 ~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 216 GNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred CCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 999999999999999999999999999999889999999999999999999998888889999999999999999864
No 260
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.96 E-value=4e-28 Score=256.93 Aligned_cols=221 Identities=24% Similarity=0.245 Sum_probs=143.6
Q ss_pred CCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-------cCCCcCEEECcCCcCCCCCchhhhCCCC
Q 047576 125 FSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLKN 197 (602)
Q Consensus 125 ~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 197 (602)
+..+++|+.|++. ++.+.+..+..|+.+++|++|+|++|++.+ .+++|++|+|++|.++...+..|+++++
T Consensus 65 ~~~l~~L~~L~L~--~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~ 142 (390)
T 3o6n_A 65 LDSFRQVELLNLN--DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPK 142 (390)
T ss_dssp HHHCCCCSEEECT--TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hcccccCcEEECC--CCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCC
Confidence 5666777777775 455555555678888888888888888763 4677888888888888666666788888
Q ss_pred CCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcccccCCCCCcEEEccCCCCCCC-CCCcc-------------
Q 047576 198 LIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGP-IPSTL------------- 263 (602)
Q Consensus 198 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~-~p~~l------------- 263 (602)
|++|+|++|++++..|..+.++++|++|++++|++++++ +..+++|+.|++++|.+++. .|..+
T Consensus 143 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~ 220 (390)
T 3o6n_A 143 LTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVV 220 (390)
T ss_dssp CCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEE
T ss_pred CcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc--cccccccceeecccccccccCCCCcceEEECCCCeeeec
Confidence 888888888888777777888888888888888888764 23333333333333333220 00000
Q ss_pred --CCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCccccccccc
Q 047576 264 --GLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRL 341 (602)
Q Consensus 264 --~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 341 (602)
...++|+.|++++|.+++. ..+..+++|++|+|++|.+++..|..+..+++|+.|+|++|++++ +|..+..+++|
T Consensus 221 ~~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L 297 (390)
T 3o6n_A 221 RGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTL 297 (390)
T ss_dssp ECCCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTC
T ss_pred cccccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCC
Confidence 1124566666666666543 355666666666666666666556666666666666666666653 34445556666
Q ss_pred ccccccCCcCC
Q 047576 342 DYLNLSGNKLS 352 (602)
Q Consensus 342 ~~L~l~~N~l~ 352 (602)
+.|++++|+++
T Consensus 298 ~~L~L~~n~l~ 308 (390)
T 3o6n_A 298 KVLDLSHNHLL 308 (390)
T ss_dssp CEEECCSSCCC
T ss_pred CEEECCCCcce
Confidence 66666666665
No 261
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.95 E-value=8.1e-28 Score=269.21 Aligned_cols=256 Identities=25% Similarity=0.303 Sum_probs=204.0
Q ss_pred CEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-------cCCCcC
Q 047576 103 SIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNLN 175 (602)
Q Consensus 103 ~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~ 175 (602)
.+..++++...+. .+....|+.+++|+.|++. ++....+|..++++++|++|+|++|++.+ .+++|+
T Consensus 255 ~L~~L~l~~n~l~---~~~~~~~~~l~~L~~L~l~---~n~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 328 (606)
T 3t6q_A 255 SVESINLQKHYFF---NISSNTFHCFSGLQELDLT---ATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLT 328 (606)
T ss_dssp EEEEEECTTCCCS---SCCTTTTTTCTTCSEEECT---TSCCSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCS
T ss_pred ceeEEEeecCccC---ccCHHHhccccCCCEEecc---CCccCCCChhhcccccCCEEECccCCcCcCchhhhhccCcCC
Confidence 4667777544332 2333346666666666664 44455888889999999999999998873 478899
Q ss_pred EEECcCCcCCCCCch-hhhCCCCCCEEEecCCCCCCCC--cccccCcCCCceeecccccCCC-CcccccCCCCCcEEEcc
Q 047576 176 YMSLSRNMLGGLLPQ-EIGNLKNLIELDVGDNSLIGPI--PLTLSRLTSLKILILAQNQLSG-LPQEIGNLKNLMLLDVG 251 (602)
Q Consensus 176 ~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~--p~~l~~l~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~ 251 (602)
+|++++|.+.+.+|. .++++++|++|++++|++++.. |..+.++++|++|++++|++++ .|..+.++++|+.|+++
T Consensus 329 ~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 408 (606)
T 3t6q_A 329 HLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLA 408 (606)
T ss_dssp EEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECT
T ss_pred EEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECC
Confidence 999999988876655 4888999999999999988765 6778889999999999999888 57778888999999999
Q ss_pred CCCCCCCCCCc-cCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCC---CCcccCCCCCCCEEeCCCCCC
Q 047576 252 NNDIIGPIPST-LGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGK---IPSQIASMEDLTWLDLSNNNI 327 (602)
Q Consensus 252 ~N~l~~~~p~~-l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~L~~N~l 327 (602)
+|++++..|.. +..+++|++|++++|.+++..|..+..+++|++|+|++|++++. .+..+..+++|+.|++++|++
T Consensus 409 ~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l 488 (606)
T 3t6q_A 409 FTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDL 488 (606)
T ss_dssp TCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCC
T ss_pred CCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCcc
Confidence 99988876654 88888999999999999888888888899999999999988762 335688888999999999999
Q ss_pred CCCCCcccccccccccccccCCcCCCccCCCCCcCCC
Q 047576 328 KGSIPGEITKLSRLDYLNLSGNKLSGRVPYSNKHLSS 364 (602)
Q Consensus 328 ~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~ 364 (602)
++..|..+..+++|+.|++++|++++..|..+..+..
T Consensus 489 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 525 (606)
T 3t6q_A 489 SSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKG 525 (606)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCS
T ss_pred CccChhhhccccCCCEEECCCCccCcCChhHhCcccc
Confidence 8888888888999999999999998888776654433
No 262
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=7.7e-28 Score=243.57 Aligned_cols=210 Identities=26% Similarity=0.275 Sum_probs=192.6
Q ss_pred ccCCccCCCCCCCCEEECcCCcCcc-------cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCC-CCCCCcccc
Q 047576 145 GSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNS-LIGPIPLTL 216 (602)
Q Consensus 145 ~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~l 216 (602)
..+|..+ .++|++|+|++|+|++ .+++|++|+|++|.+++..|..|+++++|++|+|++|. +++..|..+
T Consensus 24 ~~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~ 101 (285)
T 1ozn_A 24 QAVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATF 101 (285)
T ss_dssp SSCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTT
T ss_pred ccCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHh
Confidence 3455543 4699999999999973 47899999999999999999999999999999999998 877778899
Q ss_pred cCcCCCceeecccccCCCC-cccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCE
Q 047576 217 SRLTSLKILILAQNQLSGL-PQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFH 295 (602)
Q Consensus 217 ~~l~~L~~L~L~~N~l~~i-p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 295 (602)
..+++|++|++++|+++++ |..+.++++|++|++++|++++..+..++.+++|++|++++|++++..+..+..+++|+.
T Consensus 102 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 181 (285)
T 1ozn_A 102 HGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDR 181 (285)
T ss_dssp TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred cCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCE
Confidence 9999999999999999995 677899999999999999999888888999999999999999999887778999999999
Q ss_pred EeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccC
Q 047576 296 LDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVP 356 (602)
Q Consensus 296 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 356 (602)
|+|++|++++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++|++++..+
T Consensus 182 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 182 LLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp EECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred EECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 9999999999889999999999999999999998877889999999999999999987654
No 263
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.95 E-value=2e-29 Score=260.34 Aligned_cols=220 Identities=24% Similarity=0.294 Sum_probs=140.0
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHH-HHHhhhcCcccccccccc-------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQ-VLSQMERGSLFRILHNDA------- 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~-il~~l~~gsL~~~l~~~~------- 438 (602)
.++|.....||+|+||.||+|+.. +|+.||||++....... ....+..|+. ++..+.|+++..++....
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l 98 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEK--EQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI 98 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHH--HHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCch--HHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence 467888999999999999999874 78999999987553321 2234445555 555566666665543110
Q ss_pred -------------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCC-CeEEeCCCCCCeeeCCCCcceeeccccccc
Q 047576 439 -------------------EAVELDWAKRVNIVKAMAHALAYLHHDCSP-SVVHRDISSNNILLNSKLEAFVADFGTARL 498 (602)
Q Consensus 439 -------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~ivH~DLkp~NILld~~~~~kL~DFG~a~~ 498 (602)
....+++..+..++.|++.||.||| +. +|+||||||+||+++.++.+||+|||++..
T Consensus 99 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 99 CMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp EECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 1234788999999999999999999 66 999999999999999999999999999987
Q ss_pred ccCCCCCcccccccccccccccc----ccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhcc---
Q 047576 499 LHADSSNQTLLAGSYGYIAPELA----YTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQ--- 571 (602)
Q Consensus 499 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~--- 571 (602)
..... ......|++.|+|||++ .+..++.++||||||+++|+|++|+.||......... +..++..
T Consensus 176 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~------~~~~~~~~~~ 248 (327)
T 3aln_A 176 LVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ------LTQVVKGDPP 248 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------CCCCCSCCC
T ss_pred ccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH------HHHHhcCCCC
Confidence 64332 22234689999999998 4566899999999999999999999999753221111 1111111
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 572 RLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 572 ~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.++...... ....+.+++..||+.||++
T Consensus 249 ~~~~~~~~~---~~~~l~~li~~~l~~dp~~ 276 (327)
T 3aln_A 249 QLSNSEERE---FSPSFINFVNLCLTKDESK 276 (327)
T ss_dssp CCCCCSSCC---CCHHHHHHHHHHTCSSGGG
T ss_pred CCCCccccc---CCHHHHHHHHHHhhCChhh
Confidence 111111111 2234889999999999974
No 264
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.95 E-value=9.6e-28 Score=278.81 Aligned_cols=264 Identities=22% Similarity=0.256 Sum_probs=175.1
Q ss_pred CCCCCCceeCCCCCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccC-CccCCCCCCCCEEECcCCcCc
Q 047576 90 HCEWIGITCNSAGSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSI-PSEISALSKLQLLDLSSNRLR 168 (602)
Q Consensus 90 ~C~w~gv~C~~~~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~i-p~~l~~L~~L~~L~Ls~N~i~ 168 (602)
.|+|..|.+ -..+++.|+++...+. .+..-.|+.+++|+.|++. .++..+.+ |.+|+++++|++|+|++|+|+
T Consensus 13 ~~~L~~vP~-lp~~l~~LdLs~N~i~---~i~~~~~~~l~~L~~LdLs--~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~ 86 (844)
T 3j0a_A 13 FCNLTQVPQ-VLNTTERLLLSFNYIR---TVTASSFPFLEQLQLLELG--SQYTPLTIDKEAFRNLPNLRILDLGSSKIY 86 (844)
T ss_dssp CCCSSCCCS-SCTTCCEEEEESCCCC---EECSSSCSSCCSCSEEEEC--TTCCCCEECTTTTSSCTTCCEEECTTCCCC
T ss_pred CCCCCCCCC-CCCCcCEEECCCCcCC---ccChhHCcccccCeEEeCC--CCCCccccCHHHhcCCCCCCEEECCCCcCc
Confidence 467888888 5578899999765432 3333456666666666665 44466666 567888888888888888876
Q ss_pred c-------cCCCcCEEECcCCcCCCCCchh--hhCCCCCCEEEecCCCCCCCCc-ccccCcCCCceeecccccCCC-Ccc
Q 047576 169 G-------RLTNLNYMSLSRNMLGGLLPQE--IGNLKNLIELDVGDNSLIGPIP-LTLSRLTSLKILILAQNQLSG-LPQ 237 (602)
Q Consensus 169 ~-------~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~-ip~ 237 (602)
+ .+++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++ .|.
T Consensus 87 ~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~ 166 (844)
T 3j0a_A 87 FLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEH 166 (844)
T ss_dssp EECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSG
T ss_pred ccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHH
Confidence 3 4778888888888888766655 8888888888888888877655 467888888888888888877 455
Q ss_pred cccCC--CCCcEEEccCCCCCCCCCCccCCC-------------------------------------------------
Q 047576 238 EIGNL--KNLMLLDVGNNDIIGPIPSTLGLF------------------------------------------------- 266 (602)
Q Consensus 238 ~~~~l--~~L~~L~L~~N~l~~~~p~~l~~l------------------------------------------------- 266 (602)
.+..+ ++|+.|++++|.+++..|..++.+
T Consensus 167 ~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~ 246 (844)
T 3j0a_A 167 ELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAG 246 (844)
T ss_dssp GGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCS
T ss_pred HcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccc
Confidence 55554 555555555555555444433333
Q ss_pred -------------------CCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCC
Q 047576 267 -------------------SDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNI 327 (602)
Q Consensus 267 -------------------~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 327 (602)
++|+.|++++|.+++..|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++
T Consensus 247 ~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l 326 (844)
T 3j0a_A 247 FGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLL 326 (844)
T ss_dssp SSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCC
T ss_pred ccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCC
Confidence 3455555555555555555556666666666666666655556666666666666666666
Q ss_pred CCCCCcccccccccccccccCCcCCCccCCCC
Q 047576 328 KGSIPGEITKLSRLDYLNLSGNKLSGRVPYSN 359 (602)
Q Consensus 328 ~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~ 359 (602)
++..|..+..+++|+.|++++|++++..+..+
T Consensus 327 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~ 358 (844)
T 3j0a_A 327 GELYSSNFYGLPKVAYIDLQKNHIAIIQDQTF 358 (844)
T ss_dssp SCCCSCSCSSCTTCCEEECCSCCCCCCCSSCS
T ss_pred CccCHHHhcCCCCCCEEECCCCCCCccChhhh
Confidence 66556666666666666666666655555444
No 265
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.95 E-value=2.5e-29 Score=255.76 Aligned_cols=216 Identities=24% Similarity=0.409 Sum_probs=153.5
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|+....||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.++..+.|+++..++...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH----HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH----HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence 35788899999999999999986 478999999986433 2346788899998777777665543210
Q ss_pred ---------------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCccee
Q 047576 438 ---------------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFV 490 (602)
Q Consensus 438 ---------------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL 490 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl 157 (303)
T 1zy4_A 81 MTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKI 157 (303)
T ss_dssp -----CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEE
T ss_pred hcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEE
Confidence 01234678889999999999999999 789999999999999999999999
Q ss_pred ecccccccccCCC--------------CCccccccccccccccccccC-cCCccchhHHHHHHHHHHHcCCCCCCCCccc
Q 047576 491 ADFGTARLLHADS--------------SNQTLLAGSYGYIAPELAYTM-VMTEKYDVYSFGVVTLEVLMGKHPRDLHSTL 555 (602)
Q Consensus 491 ~DFG~a~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~Pf~~~~~~ 555 (602)
+|||.+....... .......|++.|+|||++.+. .++.++||||+|+++|||++ ||.....
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~- 233 (303)
T 1zy4_A 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME- 233 (303)
T ss_dssp CCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH-
T ss_pred eeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh-
Confidence 9999998654221 112234689999999998764 68999999999999999998 5542111
Q ss_pred ccCCCcccchhhhhc--cCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 556 SSSYDPKIMLIDVLD--QRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 556 ~~~~~~~~~~~~~~d--~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.......+.+ ..+++..... ....+.+++..|++.||++
T Consensus 234 -----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~dp~~ 274 (303)
T 1zy4_A 234 -----RVNILKKLRSVSIEFPPDFDDN---KMKVEKKIIRLLIDHDPNK 274 (303)
T ss_dssp -----HHHHHHHHHSTTCCCCTTCCTT---TSHHHHHHHHHHTCSSGGG
T ss_pred -----HHHHHHhccccccccCcccccc---chHHHHHHHHHHHhcCccc
Confidence 0111111111 1222222221 3344789999999999974
No 266
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.95 E-value=4.9e-29 Score=280.71 Aligned_cols=219 Identities=23% Similarity=0.339 Sum_probs=159.3
Q ss_pred CccccCcccccccccccceeeecC----CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP----NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND------ 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~------ 437 (602)
.++|...+.||+|+||.||+|+.. .+..||+|+++..... ...+.+.+|+.++..+.|+++..++...
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 466 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD--SVREKFLQEALTMRQFDHPHIVKLIGVITENPVW 466 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCH--HHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCH--HHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceE
Confidence 356888899999999999999763 3567999998754332 2456788899988666665554433210
Q ss_pred ----------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccC
Q 047576 438 ----------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHA 501 (602)
Q Consensus 438 ----------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~ 501 (602)
.....+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 467 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp EEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 01234789999999999999999999 78999999999999999999999999999987644
Q ss_pred CCCC-ccccccccccccccccccCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccCCCCCCCh
Q 047576 502 DSSN-QTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDR 579 (602)
Q Consensus 502 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 579 (602)
.... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+.+.... +...
T Consensus 544 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~-------~~~~~~i~~~~~~-~~~~ 615 (656)
T 2j0j_A 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-------NDVIGRIENGERL-PMPP 615 (656)
T ss_dssp ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHHTCCC-CCCT
T ss_pred CcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH-------HHHHHHHHcCCCC-CCCc
Confidence 3221 223456789999999998899999999999999999997 9999975321 1112222222111 1111
Q ss_pred hhHHHHHHHHHHHhhccCcCCCC
Q 047576 580 KVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 580 ~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
. ....+.+++..||+.||++
T Consensus 616 ~---~~~~l~~li~~~l~~dP~~ 635 (656)
T 2j0j_A 616 N---CPPTLYSLMTKCWAYDPSR 635 (656)
T ss_dssp T---CCHHHHHHHHHHTCSSGGG
T ss_pred c---ccHHHHHHHHHHcCCChhH
Confidence 1 2334789999999999974
No 267
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.95 E-value=1.4e-27 Score=264.98 Aligned_cols=259 Identities=23% Similarity=0.233 Sum_probs=201.7
Q ss_pred CCCceeCCCCCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCc----
Q 047576 93 WIGITCNSAGSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLR---- 168 (602)
Q Consensus 93 w~gv~C~~~~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~---- 168 (602)
+.+|..+-..+++.|+++...+. .+..-.|+.+++|+.|++. ++.+.+..|..|+++++|++|+|++|+|+
T Consensus 43 L~~ip~~~~~~L~~L~Ls~N~i~---~~~~~~~~~l~~L~~L~Ls--~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~ 117 (562)
T 3a79_B 43 LTHVPKDLPPRTKALSLSQNSIS---ELRMPDISFLSELRVLRLS--HNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISC 117 (562)
T ss_dssp CCSCCTTSCTTCCEEECCSSCCC---CCCGGGTTTCTTCCEEECC--SCCCCEECTTTTTTCTTCCEEECTTSCCCEECS
T ss_pred CccCCCCCCCCcCEEECCCCCcc---ccChhhhccCCCccEEECC--CCCCCcCCHHHhCCCCCCCEEECCCCcCCccCc
Confidence 44443332357888888765443 3334457788888888887 67777777889999999999999999997
Q ss_pred ccCCCcCEEECcCCcCCCC-CchhhhCCCCCCEEEecCCCCCCCCcccccCcCCC--ceeecccccC--CC-CcccccCC
Q 047576 169 GRLTNLNYMSLSRNMLGGL-LPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSL--KILILAQNQL--SG-LPQEIGNL 242 (602)
Q Consensus 169 ~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~L~~N~l--~~-ip~~~~~l 242 (602)
+.+++|++|+|++|++++. +|..|+++++|++|+|++|++++. .+..+++| +.|++++|++ ++ .|..+..+
T Consensus 118 ~~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l 194 (562)
T 3a79_B 118 CPMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIP 194 (562)
T ss_dssp CCCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEEC
T ss_pred cccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCccccccc
Confidence 3578999999999999984 578999999999999999999863 45555555 9999999988 55 45555443
Q ss_pred C-------------------------------------------------------------------------------
Q 047576 243 K------------------------------------------------------------------------------- 243 (602)
Q Consensus 243 ~------------------------------------------------------------------------------- 243 (602)
+
T Consensus 195 ~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~ 274 (562)
T 3a79_B 195 NTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFW 274 (562)
T ss_dssp CEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHT
T ss_pred CcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhh
Confidence 2
Q ss_pred --CCcEEEccCCCCCCCCCCcc-----------------------------------------------------CCCCC
Q 047576 244 --NLMLLDVGNNDIIGPIPSTL-----------------------------------------------------GLFSD 268 (602)
Q Consensus 244 --~L~~L~L~~N~l~~~~p~~l-----------------------------------------------------~~l~~ 268 (602)
+|++|++++|+++|.+|..+ ..+++
T Consensus 275 ~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~ 354 (562)
T 3a79_B 275 PRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSS 354 (562)
T ss_dssp TSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCC
T ss_pred cccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCC
Confidence 67788888888888777765 56778
Q ss_pred CccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCC--CCcccCCCCCCCEEeCCCCCCCCCCCc-cccccccccccc
Q 047576 269 LSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGK--IPSQIASMEDLTWLDLSNNNIKGSIPG-EITKLSRLDYLN 345 (602)
Q Consensus 269 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~ 345 (602)
|++|++++|.+++.+|..++++++|+.|+|++|++++. +|..+..+++|+.|++++|++++.+|. .+..+++|+.|+
T Consensus 355 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~ 434 (562)
T 3a79_B 355 FTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLN 434 (562)
T ss_dssp CCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEE
T ss_pred ceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEE
Confidence 88888888888888888888888888888888888863 356678888888888888888874554 477788888888
Q ss_pred ccCCcCCCccCCCC
Q 047576 346 LSGNKLSGRVPYSN 359 (602)
Q Consensus 346 l~~N~l~g~~p~~~ 359 (602)
+++|++++.+|..+
T Consensus 435 l~~n~l~~~~~~~l 448 (562)
T 3a79_B 435 LSSNMLTGSVFRCL 448 (562)
T ss_dssp CCSSCCCGGGGSSC
T ss_pred CCCCCCCcchhhhh
Confidence 88888888777655
No 268
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.95 E-value=2.4e-27 Score=265.36 Aligned_cols=251 Identities=21% Similarity=0.219 Sum_probs=206.1
Q ss_pred CCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCc-------ccCCCc
Q 047576 102 GSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLR-------GRLTNL 174 (602)
Q Consensus 102 ~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~-------~~l~~L 174 (602)
..++.|+++...+. .+.+-.|+.+++|+.|++. ++.+.+..|.+|+++++|++|+|++|++. +.+++|
T Consensus 33 ~~l~~L~Ls~n~i~---~~~~~~~~~l~~L~~L~Ls--~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 107 (606)
T 3t6q_A 33 NSTECLEFSFNVLP---TIQNTTFSRLINLTFLDLT--RCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKAL 107 (606)
T ss_dssp TTCCEEECTTCCCS---EECTTTSTTCTTCSEEECT--TCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTC
T ss_pred CcCcEEEccCCccC---cCChhHhccCccceEEECC--CCccceeChhhccCccccCeeeCCCCcccccChhhhcccccc
Confidence 35778888765443 3444467888888888887 66778888899999999999999999987 348899
Q ss_pred CEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCC-cccccCCCCCc--EEEcc
Q 047576 175 NYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGL-PQEIGNLKNLM--LLDVG 251 (602)
Q Consensus 175 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~i-p~~~~~l~~L~--~L~L~ 251 (602)
++|+|++|.+++..|..++++++|++|+|++|++++..+..+..+++|++|++++|+++++ |..++.+++|+ .|+++
T Consensus 108 ~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~ 187 (606)
T 3t6q_A 108 KHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLN 187 (606)
T ss_dssp CEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECT
T ss_pred cEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecC
Confidence 9999999999988888899999999999999999985545566699999999999999994 67788999998 89999
Q ss_pred CCCCCCCCCCccCCC---------------------------------------------------CCCccccCCCCcCC
Q 047576 252 NNDIIGPIPSTLGLF---------------------------------------------------SDLSYLDLSCNQFN 280 (602)
Q Consensus 252 ~N~l~~~~p~~l~~l---------------------------------------------------~~L~~L~L~~N~l~ 280 (602)
+|.+++..|..+... .+|+.|++++|.++
T Consensus 188 ~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~ 267 (606)
T 3t6q_A 188 GNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFF 267 (606)
T ss_dssp TCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCS
T ss_pred CCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccC
Confidence 999988777655321 15777888888888
Q ss_pred CCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccCCC
Q 047576 281 SSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYS 358 (602)
Q Consensus 281 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~ 358 (602)
+..+..|+.+++|++|+|++|+++ .+|..+..+++|++|++++|++++..|..+..+++|+.|++++|.+.+.+|..
T Consensus 268 ~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~ 344 (606)
T 3t6q_A 268 NISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTG 344 (606)
T ss_dssp SCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSS
T ss_pred ccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchh
Confidence 777777888888888888888887 67778888888888888888888777778888888888888888888777654
No 269
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.95 E-value=2e-29 Score=259.04 Aligned_cols=216 Identities=18% Similarity=0.338 Sum_probs=150.4
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCc------------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGS------------------ 429 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gs------------------ 429 (602)
.++|...+.||+|+||.||+|+... .||+|+++..... ....+.+.+|+.++..+.|++
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDN-EDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCC-CCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCC-HHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 4678899999999999999998753 4899988754321 112356777887775555444
Q ss_pred -------cccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCC
Q 047576 430 -------LFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD 502 (602)
Q Consensus 430 -------L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~ 502 (602)
|.+++... ...+++.++..++.|++.||+||| +.+|+||||||+||+++ ++.+||+|||++......
T Consensus 109 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~ 182 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL 182 (319)
T ss_dssp BCCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC-----
T ss_pred ecccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCccccccc
Confidence 44444321 234889999999999999999999 78999999999999998 679999999998765321
Q ss_pred -----CCCcccccccccccccccccc---------CcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhh
Q 047576 503 -----SSNQTLLAGSYGYIAPELAYT---------MVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDV 568 (602)
Q Consensus 503 -----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 568 (602)
........|++.|+|||++.+ ..++.++||||||+++|||++|+.||..... ......+
T Consensus 183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~~~~~~ 255 (319)
T 2y4i_B 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA-------EAIIWQM 255 (319)
T ss_dssp -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH-------HHHHHHH
T ss_pred cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHh
Confidence 112233468999999999874 3478899999999999999999999975321 1111111
Q ss_pred hccCCCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 569 LDQRLPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 569 ~d~~l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.....+...... ....+.+++..||+.||++
T Consensus 256 ~~~~~~~~~~~~---~~~~l~~li~~~l~~~p~~ 286 (319)
T 2y4i_B 256 GTGMKPNLSQIG---MGKEISDILLFCWAFEQEE 286 (319)
T ss_dssp HTTCCCCCCCSS---CCTTHHHHHHHHHCSSTTT
T ss_pred ccCCCCCCCcCC---CCHHHHHHHHHHhcCChhh
Confidence 111111110000 1123788999999999975
No 270
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.95 E-value=1.1e-28 Score=252.96 Aligned_cols=212 Identities=23% Similarity=0.312 Sum_probs=157.8
Q ss_pred CccccCcccccccccccceeeec-CCCcEEeeeccCCchhHH---HHHhhhhHhHHHHHHhh----hcCccccccccc--
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEE---LAFIRSFRNEAQVLSQM----ERGSLFRILHND-- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~---~~~~~~~~~E~~il~~l----~~gsL~~~l~~~-- 437 (602)
.++|...+.||+|+||.||+|+. .+++.||||++....... ......+.+|+.++..+ .|.++..++...
T Consensus 30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~ 109 (312)
T 2iwi_A 30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET 109 (312)
T ss_dssp ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC--
T ss_pred hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec
Confidence 46799999999999999999976 478899999997554321 12335667788888776 566666544311
Q ss_pred ---------------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeC-CCCcceeecccc
Q 047576 438 ---------------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLN-SKLEAFVADFGT 495 (602)
Q Consensus 438 ---------------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld-~~~~~kL~DFG~ 495 (602)
.....+++..+..++.|++.||+||| +.+|+||||||+||+++ .++.+||+|||+
T Consensus 110 ~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~ 186 (312)
T 2iwi_A 110 QEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGS 186 (312)
T ss_dssp ---CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEECCCSS
T ss_pred CCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEEEEcch
Confidence 01234789999999999999999999 77999999999999999 889999999999
Q ss_pred cccccCCCCCccccccccccccccccccCcCC-ccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCC
Q 047576 496 ARLLHADSSNQTLLAGSYGYIAPELAYTMVMT-EKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLP 574 (602)
Q Consensus 496 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~ 574 (602)
+....... .....|+..|+|||++.+..+. .++||||+|+++|||++|+.||.... ++.+....
T Consensus 187 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------------~~~~~~~~ 251 (312)
T 2iwi_A 187 GALLHDEP--YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------------EILEAELH 251 (312)
T ss_dssp CEECCSSC--BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------------HHHHTCCC
T ss_pred hhhcccCc--ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------------HHhhhccC
Confidence 98765432 2345689999999998877654 58999999999999999999997421 12222222
Q ss_pred CCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 575 PPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 575 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.+. . ....+.+++.+||+.||++
T Consensus 252 ~~~--~---~~~~~~~li~~~l~~~p~~ 274 (312)
T 2iwi_A 252 FPA--H---VSPDCCALIRRCLAPKPSS 274 (312)
T ss_dssp CCT--T---SCHHHHHHHHHHTCSSTTT
T ss_pred Ccc--c---CCHHHHHHHHHHccCChhh
Confidence 111 0 1223778999999999975
No 271
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.95 E-value=1.9e-27 Score=266.15 Aligned_cols=125 Identities=18% Similarity=0.222 Sum_probs=96.9
Q ss_pred cCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCc-hhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCC
Q 047576 240 GNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIP-NELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLT 318 (602)
Q Consensus 240 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 318 (602)
..+++|++|++++|.+++ +|..+..+++|+.|++++|.+++..| ..+..+++|++|++++|++++..|..+..+++|+
T Consensus 373 ~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 451 (606)
T 3vq2_A 373 LGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLN 451 (606)
T ss_dssp HCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCC
T ss_pred ccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCC
Confidence 334444444444444443 44667788888899999999888877 6788889999999999999888888888889999
Q ss_pred EEeCCCCCCCC-CCCcccccccccccccccCCcCCCccCCCCCcCCCC
Q 047576 319 WLDLSNNNIKG-SIPGEITKLSRLDYLNLSGNKLSGRVPYSNKHLSSM 365 (602)
Q Consensus 319 ~L~L~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~l 365 (602)
.|++++|++++ .+|..+..+++|+.|++++|++++..|..+..+..+
T Consensus 452 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 499 (606)
T 3vq2_A 452 TLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRL 499 (606)
T ss_dssp EEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred EEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccC
Confidence 99999998887 478888888999999999999988888766544443
No 272
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.95 E-value=3.3e-29 Score=253.69 Aligned_cols=221 Identities=21% Similarity=0.305 Sum_probs=162.3
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccc---------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHND--------- 437 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~--------- 437 (602)
.++|.....||+|+||.||+|+.. +++.||+|++...... ....+.+.+|+.++..+.|+++..++...
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc-hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 357889999999999999999875 7899999998644322 11245678899999777777766554311
Q ss_pred -------------cchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCC---CcceeecccccccccC
Q 047576 438 -------------AEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSK---LEAFVADFGTARLLHA 501 (602)
Q Consensus 438 -------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~---~~~kL~DFG~a~~~~~ 501 (602)
.....+++.++..++.|++.||+||| +.+|+||||||+||+++.+ +.+||+|||++.....
T Consensus 100 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred EEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 01234789999999999999999999 7899999999999999754 4699999999987654
Q ss_pred CCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhh
Q 047576 502 DSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKV 581 (602)
Q Consensus 502 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 581 (602)
... .....|++.|+|||++.+. ++.++||||||+++|+|++|+.||..... ......+.......+... .
T Consensus 177 ~~~-~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~-~ 246 (287)
T 2wei_A 177 NTK-MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNE-------YDILKRVETGKYAFDLPQ-W 246 (287)
T ss_dssp CSS-CSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCCCCCCSGG-G
T ss_pred CCc-cccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHcCCCCCCchh-h
Confidence 322 2234688999999988764 88999999999999999999999975321 111222222222211110 0
Q ss_pred HHHHHHHHHHHhhccCcCCCC
Q 047576 582 IQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 582 ~~~~~~l~~l~~~Cl~~dP~e 602 (602)
......+.+++..|++.||++
T Consensus 247 ~~~~~~~~~li~~~l~~dp~~ 267 (287)
T 2wei_A 247 RTISDDAKDLIRKMLTFHPSL 267 (287)
T ss_dssp TTSCHHHHHHHHHHTCSSGGG
T ss_pred hhcCHHHHHHHHHHcccChhh
Confidence 112334789999999999974
No 273
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.95 E-value=1.6e-28 Score=251.96 Aligned_cols=221 Identities=24% Similarity=0.311 Sum_probs=146.1
Q ss_pred CccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc--------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA-------- 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~-------- 438 (602)
.++|.....||+|+||.||+|+.. +|+.||||++....... ...+.+.++..++..+.|+++..++....
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKE-ENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHH-HHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccch-HHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 467888899999999999999875 78999999987554322 12234444555667777777766543210
Q ss_pred --------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCC-CeEEeCCCCCCeeeCCCCcceeecccccccccCCC
Q 047576 439 --------------EAVELDWAKRVNIVKAMAHALAYLHHDCSP-SVVHRDISSNNILLNSKLEAFVADFGTARLLHADS 503 (602)
Q Consensus 439 --------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~ 503 (602)
....+++..+..++.|++.||+||| ++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 103 ~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 103 MELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp ECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred EeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 1234788999999999999999999 64 99999999999999999999999999997664432
Q ss_pred CCccccccccccccccccc-----cCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCC-CCC
Q 047576 504 SNQTLLAGSYGYIAPELAY-----TMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLP-PPV 577 (602)
Q Consensus 504 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~-~~~ 577 (602)
......|++.|+|||++. ...++.++||||||+++|||++|+.||..... ....+..+.....+ .+.
T Consensus 180 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~ 252 (318)
T 2dyl_A 180 -AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT------DFEVLTKVLQEEPPLLPG 252 (318)
T ss_dssp --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS------HHHHHHHHHHSCCCCCCS
T ss_pred -cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc------cHHHHHHHhccCCCCCCc
Confidence 223356899999999984 45688999999999999999999999974221 11122222222211 110
Q ss_pred ChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 578 DRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 578 ~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
... ....+.+++..||+.||++
T Consensus 253 ~~~---~~~~l~~li~~~l~~dp~~ 274 (318)
T 2dyl_A 253 HMG---FSGDFQSFVKDCLTKDHRK 274 (318)
T ss_dssp SSC---CCHHHHHHHHHHTCSCTTT
T ss_pred cCC---CCHHHHHHHHHHccCChhH
Confidence 001 2234788999999999975
No 274
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.95 E-value=2.5e-28 Score=269.94 Aligned_cols=262 Identities=23% Similarity=0.340 Sum_probs=169.9
Q ss_pred CCCCCCceeCCC------------CCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCC
Q 047576 90 HCEWIGITCNSA------------GSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKL 157 (602)
Q Consensus 90 ~C~w~gv~C~~~------------~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L 157 (602)
.|.|.|| |+.. .+++.|+++...+. .+..-.|+.+++|+.|++. .+.+.+..|.+|+++++|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~---~~~~~~~~~l~~L~~L~Ls--~n~i~~~~~~~~~~l~~L 76 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKIT---YIGHGDLRACANLQVLILK--SSRINTIEGDAFYSLGSL 76 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCC---EECSSTTSSCTTCCEEECT--TSCCCEECTTTTTTCTTC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccC---ccChhhhhcCCcccEEECC--CCCcCccChhhccccccC
Confidence 5899998 8632 25667777654332 2333356777777777776 566666667788888888
Q ss_pred CEEECcCCcCcc-------cCCCcCEEECcCCcCCCC-CchhhhCCCCCCEEEecCCCCCCCCc-ccccCcCCCceeecc
Q 047576 158 QLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGL-LPQEIGNLKNLIELDVGDNSLIGPIP-LTLSRLTSLKILILA 228 (602)
Q Consensus 158 ~~L~Ls~N~i~~-------~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~ 228 (602)
++|+|++|++++ .+++|++|+|++|.+++. .|..++++++|++|++++|++.+.+| ..+.++++|++|+++
T Consensus 77 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~ 156 (549)
T 2z81_A 77 EHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIK 156 (549)
T ss_dssp CEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEE
T ss_pred CEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeecc
Confidence 888888888773 477888888888888763 56678888888888888887555554 567888888888888
Q ss_pred cccCCC-CcccccC------------------------CCCCcEEEccCCCCCCCC--CCcc-CC---------------
Q 047576 229 QNQLSG-LPQEIGN------------------------LKNLMLLDVGNNDIIGPI--PSTL-GL--------------- 265 (602)
Q Consensus 229 ~N~l~~-ip~~~~~------------------------l~~L~~L~L~~N~l~~~~--p~~l-~~--------------- 265 (602)
+|++++ +|..+++ +++|++|++++|++++.. |..+ ..
T Consensus 157 ~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 236 (549)
T 2z81_A 157 ALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLT 236 (549)
T ss_dssp ETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEE
T ss_pred CCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccc
Confidence 888877 5655543 456666666677666531 0000 00
Q ss_pred ------------------------------------------------------------------------CCCCcccc
Q 047576 266 ------------------------------------------------------------------------FSDLSYLD 273 (602)
Q Consensus 266 ------------------------------------------------------------------------l~~L~~L~ 273 (602)
.++|+.|+
T Consensus 237 ~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~ 316 (549)
T 2z81_A 237 DESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRIT 316 (549)
T ss_dssp HHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEE
T ss_pred hhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEE
Confidence 12344444
Q ss_pred CCCCcCCCCCchhh-hCCCCCCEEeccCCCCCCCCC---cccCCCCCCCEEeCCCCCCCCCCC--ccccccccccccccc
Q 047576 274 LSCNQFNSSIPNEL-TRLTQLFHLDLSSNKLSGKIP---SQIASMEDLTWLDLSNNNIKGSIP--GEITKLSRLDYLNLS 347 (602)
Q Consensus 274 L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~l~ 347 (602)
+++|.++ .+|..+ ..+++|++|+|++|++++.+| ..++.+++|+.|+|++|++++..+ ..+..+++|+.|+++
T Consensus 317 l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls 395 (549)
T 2z81_A 317 VENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDIS 395 (549)
T ss_dssp EESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECT
T ss_pred eccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECC
Confidence 4444443 344443 356777777777777776553 235667777777777777765432 346667777777777
Q ss_pred CCcCCCccCCCC
Q 047576 348 GNKLSGRVPYSN 359 (602)
Q Consensus 348 ~N~l~g~~p~~~ 359 (602)
+|+++ .+|..+
T Consensus 396 ~N~l~-~lp~~~ 406 (549)
T 2z81_A 396 RNTFH-PMPDSC 406 (549)
T ss_dssp TCCCC-CCCSCC
T ss_pred CCCCc-cCChhh
Confidence 77776 455443
No 275
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=8.5e-28 Score=245.76 Aligned_cols=254 Identities=23% Similarity=0.301 Sum_probs=216.9
Q ss_pred CCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCcc--ccCCccCCCCCCCCEEECcCCcCc------ccCCC
Q 047576 102 GSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFT--GSIPSEISALSKLQLLDLSSNRLR------GRLTN 173 (602)
Q Consensus 102 ~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~--~~ip~~l~~L~~L~~L~Ls~N~i~------~~l~~ 173 (602)
.+++.|+++...+. .++.-.|+.+++|+.|++. .+.+. +.+|..+..+++|++|+|++|.+. +.+++
T Consensus 28 ~~l~~L~L~~n~l~---~i~~~~~~~l~~L~~L~L~--~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~l~~~~~~l~~ 102 (306)
T 2z66_A 28 SSATRLELESNKLQ---SLPHGVFDKLTQLTKLSLS--SNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQ 102 (306)
T ss_dssp TTCCEEECCSSCCC---CCCTTTTTTCTTCSEEECC--SSCCCEEEEEEHHHHSCSCCCEEECCSCSEEEEEEEEETCTT
T ss_pred CCCCEEECCCCccC---ccCHhHhhccccCCEEECC--CCccCcccCcccccccccccCEEECCCCccccChhhcCCCCC
Confidence 46888999765443 3444446777888888776 44443 444778888999999999999987 35899
Q ss_pred cCEEECcCCcCCCCCc-hhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCC--CcccccCCCCCcEEEc
Q 047576 174 LNYMSLSRNMLGGLLP-QEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSG--LPQEIGNLKNLMLLDV 250 (602)
Q Consensus 174 L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~--ip~~~~~l~~L~~L~L 250 (602)
|++|+|++|++++..+ ..+..+++|++|++++|.+++..|..+.++++|++|++++|.+++ +|..+..+++|++|++
T Consensus 103 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L 182 (306)
T 2z66_A 103 LEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDL 182 (306)
T ss_dssp CCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEEC
T ss_pred CCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEEC
Confidence 9999999999998766 689999999999999999999999999999999999999999997 7889999999999999
Q ss_pred cCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCC-CCCEEeCCCCCCCC
Q 047576 251 GNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASME-DLTWLDLSNNNIKG 329 (602)
Q Consensus 251 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~ 329 (602)
++|++++..|..+..+++|++|+|++|.+++..+..+..+++|+.|+|++|++++..|..+..++ +|+.|+|++|.+++
T Consensus 183 s~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 183 SQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred CCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 99999998899999999999999999999998888899999999999999999999999999985 99999999999997
Q ss_pred CCC--cccccccccccccccCCcCCCccCCCCC
Q 047576 330 SIP--GEITKLSRLDYLNLSGNKLSGRVPYSNK 360 (602)
Q Consensus 330 ~~p--~~~~~l~~L~~L~l~~N~l~g~~p~~~~ 360 (602)
..+ .....+...+.+.+..+.+....|....
T Consensus 263 ~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~ 295 (306)
T 2z66_A 263 TCEHQSFLQWIKDQRQLLVEVERMECATPSDKQ 295 (306)
T ss_dssp SGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGT
T ss_pred ccChHHHHHHHHhhhhhhccccccccCCchhhC
Confidence 533 1233445566777788888888887754
No 276
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.95 E-value=1.6e-28 Score=263.41 Aligned_cols=217 Identities=23% Similarity=0.317 Sum_probs=149.5
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh-hcCccccccccccc-------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM-ERGSLFRILHNDAE------- 439 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l-~~gsL~~~l~~~~~------- 439 (602)
..+|...+.||+|+||+||.....+|+.||||++.... ...+.+|+.++..+ .|+++..++.....
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~------~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC------FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT------EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH------HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 34688899999999999665555589999999986543 24467899999877 68887776542111
Q ss_pred ---------------hhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCC-----CCcceeecccccccc
Q 047576 440 ---------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS-----KLEAFVADFGTARLL 499 (602)
Q Consensus 440 ---------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~-----~~~~kL~DFG~a~~~ 499 (602)
...+.+.++..++.||+.||+||| +.+|+||||||+||+++. ...+||+|||+++..
T Consensus 97 ~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~ 173 (432)
T 3p23_A 97 IELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173 (432)
T ss_dssp EECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred EECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence 111334456789999999999999 789999999999999943 345789999999876
Q ss_pred cCCC---CCccccccccccccccccc---cCcCCccchhHHHHHHHHHHHc-CCCCCCCCcccccCCCcccchhhhhccC
Q 047576 500 HADS---SNQTLLAGSYGYIAPELAY---TMVMTEKYDVYSFGVVTLEVLM-GKHPRDLHSTLSSSYDPKIMLIDVLDQR 572 (602)
Q Consensus 500 ~~~~---~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~d~~ 572 (602)
.... .......||+.|+|||++. ...++.++||||+||++|||+| |+.||...... ....+....
T Consensus 174 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~--------~~~~~~~~~ 245 (432)
T 3p23_A 174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR--------QANILLGAC 245 (432)
T ss_dssp ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH--------HHHHHTTCC
T ss_pred cCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH--------HHHHHhccC
Confidence 5432 1223457999999999987 4567889999999999999999 99999532110 011111111
Q ss_pred CCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 573 LPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 573 l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
........ ......+.+++.+||+.||++
T Consensus 246 ~~~~~~~~-~~~~~~~~~li~~~L~~dP~~ 274 (432)
T 3p23_A 246 SLDCLHPE-KHEDVIARELIEKMIAMDPQK 274 (432)
T ss_dssp CCTTSCTT-CHHHHHHHHHHHHHSCSSGGG
T ss_pred CccccCcc-ccccHHHHHHHHHHHhCCHhh
Confidence 11000000 123344789999999999974
No 277
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.95 E-value=1.7e-27 Score=261.76 Aligned_cols=245 Identities=21% Similarity=0.273 Sum_probs=164.3
Q ss_pred CCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc----cCCCcCEE
Q 047576 102 GSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG----RLTNLNYM 177 (602)
Q Consensus 102 ~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~----~l~~L~~L 177 (602)
.+++.|+++...+. .+..-.|..+++|+.|++. ++.+.+..|..|+++++|++|+|++|+|++ .+++|++|
T Consensus 21 ~~L~~L~Ls~n~i~---~~~~~~~~~l~~L~~L~Ls--~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~l~~L~~L 95 (520)
T 2z7x_B 21 QKTTILNISQNYIS---ELWTSDILSLSKLRILIIS--HNRIQYLDISVFKFNQELEYLDLSHNKLVKISCHPTVNLKHL 95 (520)
T ss_dssp TTCSEEECCSSCCC---CCCHHHHTTCTTCCEEECC--SSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECCCCCCCSEE
T ss_pred ccccEEECCCCccc---ccChhhccccccccEEecC--CCccCCcChHHhhcccCCCEEecCCCceeecCccccCCccEE
Confidence 57888888765432 2222347788888888887 677777778999999999999999999973 57899999
Q ss_pred ECcCCcCCC-CCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCC--ceeecccccC--CC-CcccccCCC--------
Q 047576 178 SLSRNMLGG-LLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSL--KILILAQNQL--SG-LPQEIGNLK-------- 243 (602)
Q Consensus 178 ~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~L~~N~l--~~-ip~~~~~l~-------- 243 (602)
+|++|++++ .+|..|+++++|++|+|++|++++ ..+..+++| +.|++++|++ ++ +|..+..++
T Consensus 96 ~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l 172 (520)
T 2z7x_B 96 DLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVF 172 (520)
T ss_dssp ECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEEC
T ss_pred eccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEe
Confidence 999999998 578999999999999999999876 356666777 8888888877 44 454444322
Q ss_pred ---------------------------------------------------------------------------CCcEE
Q 047576 244 ---------------------------------------------------------------------------NLMLL 248 (602)
Q Consensus 244 ---------------------------------------------------------------------------~L~~L 248 (602)
+|++|
T Consensus 173 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L 252 (520)
T 2z7x_B 173 PTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYF 252 (520)
T ss_dssp CSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEE
T ss_pred ccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEE
Confidence 67777
Q ss_pred EccCCCCCCCCCCcc-----CCCCCCccccCCCCcCCCCCc-hh-------------------------hhCCCCCCEEe
Q 047576 249 DVGNNDIIGPIPSTL-----GLFSDLSYLDLSCNQFNSSIP-NE-------------------------LTRLTQLFHLD 297 (602)
Q Consensus 249 ~L~~N~l~~~~p~~l-----~~l~~L~~L~L~~N~l~~~~p-~~-------------------------~~~l~~L~~L~ 297 (602)
++++|+++|.+|..+ +.+++|+.+++++|.+ .+| .. +..+++|++|+
T Consensus 253 ~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~ 330 (520)
T 2z7x_B 253 SISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLD 330 (520)
T ss_dssp EEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEE
T ss_pred EeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEE
Confidence 777777777777766 4444444444444433 122 00 13445555555
Q ss_pred ccCCCCCCCCCcccCCCCCCCEEeCCCCCCCC--CCCcccccccccccccccCCcCCCccC
Q 047576 298 LSSNKLSGKIPSQIASMEDLTWLDLSNNNIKG--SIPGEITKLSRLDYLNLSGNKLSGRVP 356 (602)
Q Consensus 298 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~g~~p 356 (602)
|++|++++.+|..+..+++|+.|++++|++++ .+|..+..+++|+.|++++|++++.+|
T Consensus 331 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ 391 (520)
T 2z7x_B 331 FSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEK 391 (520)
T ss_dssp CCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGG
T ss_pred eECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccc
Confidence 55555555555555555555555555555554 334445555555555555555555444
No 278
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.95 E-value=2.7e-27 Score=268.61 Aligned_cols=241 Identities=27% Similarity=0.343 Sum_probs=174.3
Q ss_pred CCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-------cCCCc
Q 047576 102 GSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNL 174 (602)
Q Consensus 102 ~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L 174 (602)
.+++.|+++...+. .+....|+.+++|+.|++. .+.+.+..|..|+++++|++|+|++|++++ .+++|
T Consensus 25 ~~l~~L~Ls~n~l~---~~~~~~~~~l~~L~~L~Ls--~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L 99 (680)
T 1ziw_A 25 TNITVLNLTHNQLR---RLPAANFTRYSQLTSLDVG--FNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNL 99 (680)
T ss_dssp TTCSEEECCSSCCC---CCCGGGGGGGTTCSEEECC--SSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CCCcEEECCCCCCC---CcCHHHHhCCCcCcEEECC--CCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCC
Confidence 46788888765432 2344457777888888876 567777778889999999999999998873 47889
Q ss_pred CEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCc-ccc--cCCCCCcEEEcc
Q 047576 175 NYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLP-QEI--GNLKNLMLLDVG 251 (602)
Q Consensus 175 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip-~~~--~~l~~L~~L~L~ 251 (602)
++|+|++|++++..|..|+++++|++|+|++|.+++..|..++++++|++|++++|++++++ ..+ ..+++|+.|+++
T Consensus 100 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~ 179 (680)
T 1ziw_A 100 TELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELS 179 (680)
T ss_dssp SEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECT
T ss_pred CEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECC
Confidence 99999999999888889999999999999999999888888999999999999999998854 333 345788888888
Q ss_pred CCCCCCCCCCccCCC---------------------------CCCccccCCCCcCCCCCchhhhCCCC--CCEEeccCCC
Q 047576 252 NNDIIGPIPSTLGLF---------------------------SDLSYLDLSCNQFNSSIPNELTRLTQ--LFHLDLSSNK 302 (602)
Q Consensus 252 ~N~l~~~~p~~l~~l---------------------------~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~Ls~N~ 302 (602)
+|++++..|..+..+ ++|+.|++++|.+++..|..|..++. |+.|+|++|+
T Consensus 180 ~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~ 259 (680)
T 1ziw_A 180 SNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNN 259 (680)
T ss_dssp TCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSC
T ss_pred CCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCC
Confidence 888887777655433 34555666666666666656655533 6666666666
Q ss_pred CCCCCCcccCCCCCCCEEeCCCCCCCCCCCccccccccccccccc
Q 047576 303 LSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLS 347 (602)
Q Consensus 303 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 347 (602)
+++..|..++.+++|+.|++++|++++..|..+..+++|+.|+++
T Consensus 260 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 304 (680)
T 1ziw_A 260 LNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLK 304 (680)
T ss_dssp CCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECT
T ss_pred cCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEecc
Confidence 666555666666666666666666665555444444333333333
No 279
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.95 E-value=3.3e-28 Score=261.39 Aligned_cols=216 Identities=22% Similarity=0.309 Sum_probs=147.2
Q ss_pred ccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh-hcCccccccccccc--------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM-ERGSLFRILHNDAE-------- 439 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l-~~gsL~~~l~~~~~-------- 439 (602)
+.|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|+.++..+ .|+++..++.....
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~ 88 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF------CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIAL 88 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH------HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEE
Confidence 3455678899999999987766689999999986432 23456788888654 67766655432100
Q ss_pred ----------------h----hhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCC-------------C
Q 047576 440 ----------------A----VELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSK-------------L 486 (602)
Q Consensus 440 ----------------~----~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~-------------~ 486 (602)
. ...++..+..++.||+.||+||| +.+|+||||||+||+++.+ +
T Consensus 89 E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~ 165 (434)
T 2rio_A 89 ELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENL 165 (434)
T ss_dssp CCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSC
T ss_pred ecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCce
Confidence 0 00122345679999999999999 7899999999999999754 4
Q ss_pred cceeecccccccccCCCCC----cccccccccccccccccc-------CcCCccchhHHHHHHHHHHHc-CCCCCCCCcc
Q 047576 487 EAFVADFGTARLLHADSSN----QTLLAGSYGYIAPELAYT-------MVMTEKYDVYSFGVVTLEVLM-GKHPRDLHST 554 (602)
Q Consensus 487 ~~kL~DFG~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~ 554 (602)
.+||+|||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||+| |+.||.....
T Consensus 166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~ 245 (434)
T 2rio_A 166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245 (434)
T ss_dssp EEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT
T ss_pred EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh
Confidence 8999999999877543221 223579999999999876 568999999999999999999 9999974321
Q ss_pred cccCCCcccchhhhhccCCCCC--CChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 555 LSSSYDPKIMLIDVLDQRLPPP--VDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 555 ~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
. . ..++......+ ...........+.+++..|++.||++
T Consensus 246 ~------~---~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 286 (434)
T 2rio_A 246 R------E---SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLK 286 (434)
T ss_dssp H------H---HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGG
T ss_pred h------H---HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhh
Confidence 1 0 11222111100 00001224456889999999999974
No 280
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=9.1e-29 Score=269.49 Aligned_cols=308 Identities=19% Similarity=0.196 Sum_probs=169.0
Q ss_pred CEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc--cCCCcCEEECc
Q 047576 103 SIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG--RLTNLNYMSLS 180 (602)
Q Consensus 103 ~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~--~l~~L~~L~L~ 180 (602)
+++.|+++...+. .+.+-.|+.+++|+.|++. +|.+.+.+| ++.+++|++|+|++|.|++ ..++|++|+|+
T Consensus 35 ~L~~L~Ls~n~l~---~~~~~~~~~l~~L~~L~Ls--~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLS---QISAADLAPFTKLELLNLS--SNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCC---CCCGGGGTTCTTCCEEECT--TSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECC
T ss_pred CccEEEeeCCcCC---CCCHHHHhCCCCCCEEEee--CCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECc
Confidence 4556666543322 1222235555555555554 444444443 6666666666666666653 24666666666
Q ss_pred CCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCC-Cccccc-CCCCCcEEEccCCCCCCC
Q 047576 181 RNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSG-LPQEIG-NLKNLMLLDVGNNDIIGP 258 (602)
Q Consensus 181 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-ip~~~~-~l~~L~~L~L~~N~l~~~ 258 (602)
+|.|++..+. .+++|++|+|++|.+++..|..++++++|++|+|++|.+++ +|..+. ++++|+.|+|++|.|++.
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 6666655443 24566666666666666666666666666666666666666 444554 566666666666666654
Q ss_pred CCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCC-CCCCccccc
Q 047576 259 IPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIK-GSIPGEITK 337 (602)
Q Consensus 259 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~ 337 (602)
.+ +..+++|++|+|++|.+++..| .+..+++|+.|+|++|.|++ +|..+..+++|+.|++++|.+. +.+|..+..
T Consensus 185 ~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~ 260 (487)
T 3oja_A 185 KG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (487)
T ss_dssp EC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTT
T ss_pred cc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHh
Confidence 22 2246666666666666665433 36666666666666666664 5555666666666666666665 455555666
Q ss_pred ccccccccccC-CcCCCccCCCCCcCCCCCCCccccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhH
Q 047576 338 LSRLDYLNLSG-NKLSGRVPYSNKHLSSMPTPRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFR 416 (602)
Q Consensus 338 l~~L~~L~l~~-N~l~g~~p~~~~~l~~lp~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~ 416 (602)
++.|+.++++. +.+.|..|..... +....+ ..++.+..+.+|..+. +++|+....... ....+.|.
T Consensus 261 l~~L~~l~~~~~~~~~~~~~~~c~~----~~~~~~---~~~~~~~~~~~~~~~l-----~~~~~~~~~~~~-~~g~~eF~ 327 (487)
T 3oja_A 261 NQRVQTVAKQTVKKLTGQNEEECTV----PTLGHY---GAYCCEDLPAPFADRL-----IALKRKEHALLS-GQGSETER 327 (487)
T ss_dssp CHHHHHHHHHHHHHHTSSSSCCCSS----TTCEEE---TTEEECCCSCHHHHHH-----HHHHHHHHCSCC------CHH
T ss_pred CCCCcEEeccccccccCCCcccccC----Cccccc---cccccccccchhhhHH-----HHHHHHhhhhcc-cccHHHHH
Confidence 66666666541 1222222222110 000000 0123334444444322 233322111100 12357899
Q ss_pred hHHHHHHhhhcCccccccccc
Q 047576 417 NEAQVLSQMERGSLFRILHND 437 (602)
Q Consensus 417 ~E~~il~~l~~gsL~~~l~~~ 437 (602)
.|++++..+.|.+|..++..+
T Consensus 328 ~Eve~L~~i~HrNLV~L~gyC 348 (487)
T 3oja_A 328 LECERENQARQREIDALKEQY 348 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcccccchhhHHHHh
Confidence 999999999999999887654
No 281
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.95 E-value=1.3e-26 Score=239.80 Aligned_cols=240 Identities=21% Similarity=0.303 Sum_probs=204.9
Q ss_pred EEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-------cCCCcCE
Q 047576 104 IIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNY 176 (602)
Q Consensus 104 v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~~ 176 (602)
+..++++..++ ..+....+++++.|++. ++++.+..|..|+++++|++|+|++|+|++ .+++|++
T Consensus 35 l~~l~~~~~~l------~~ip~~~~~~l~~L~l~--~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 106 (332)
T 2ft3_A 35 LRVVQCSDLGL------KAVPKEISPDTTLLDLQ--NNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQK 106 (332)
T ss_dssp TTEEECCSSCC------SSCCSCCCTTCCEEECC--SSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCE
T ss_pred CCEEECCCCCc------cccCCCCCCCCeEEECC--CCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCE
Confidence 34567765433 33333445788888876 566666667789999999999999999873 4789999
Q ss_pred EECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCC---CcccccCCCCCcEEEccCC
Q 047576 177 MSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSG---LPQEIGNLKNLMLLDVGNN 253 (602)
Q Consensus 177 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~---ip~~~~~l~~L~~L~L~~N 253 (602)
|+|++|+++ .+|..+. ++|++|++++|++++..+..+.++++|++|++++|.++. .|..+..+ +|+.|++++|
T Consensus 107 L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n 182 (332)
T 2ft3_A 107 LYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEA 182 (332)
T ss_dssp EECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSS
T ss_pred EECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCC
Confidence 999999999 4555554 899999999999998777789999999999999999974 56677777 9999999999
Q ss_pred CCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCc
Q 047576 254 DIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPG 333 (602)
Q Consensus 254 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 333 (602)
++++ +|..+. ++|++|++++|.+++..|..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|+++ .+|.
T Consensus 183 ~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 258 (332)
T 2ft3_A 183 KLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPA 258 (332)
T ss_dssp BCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCT
T ss_pred CCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecCh
Confidence 9996 666554 79999999999999988889999999999999999999988889999999999999999999 7888
Q ss_pred ccccccccccccccCCcCCCccCCCC
Q 047576 334 EITKLSRLDYLNLSGNKLSGRVPYSN 359 (602)
Q Consensus 334 ~~~~l~~L~~L~l~~N~l~g~~p~~~ 359 (602)
.+..+++|+.|++++|++++..+..+
T Consensus 259 ~l~~l~~L~~L~l~~N~l~~~~~~~~ 284 (332)
T 2ft3_A 259 GLPDLKLLQVVYLHTNNITKVGVNDF 284 (332)
T ss_dssp TGGGCTTCCEEECCSSCCCBCCTTSS
T ss_pred hhhcCccCCEEECCCCCCCccChhHc
Confidence 89999999999999999998766554
No 282
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.95 E-value=2.9e-26 Score=236.95 Aligned_cols=241 Identities=23% Similarity=0.300 Sum_probs=206.0
Q ss_pred EEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-------cCCCcCE
Q 047576 104 IIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNY 176 (602)
Q Consensus 104 v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~~ 176 (602)
+..+++++.++ ..+.....++++.|++. ++++.+..+..|+++++|++|+|++|++++ .+++|++
T Consensus 33 l~~l~~~~~~l------~~lp~~~~~~l~~L~L~--~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (330)
T 1xku_A 33 LRVVQCSDLGL------EKVPKDLPPDTALLDLQ--NNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLER 104 (330)
T ss_dssp TTEEECTTSCC------CSCCCSCCTTCCEEECC--SSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCE
T ss_pred CeEEEecCCCc------cccCccCCCCCeEEECC--CCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCE
Confidence 34567764433 33333345678888776 566666666689999999999999999874 4789999
Q ss_pred EECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCC---CcccccCCCCCcEEEccCC
Q 047576 177 MSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSG---LPQEIGNLKNLMLLDVGNN 253 (602)
Q Consensus 177 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~---ip~~~~~l~~L~~L~L~~N 253 (602)
|+|++|+++. +|..+. ++|++|++++|++++..+..+.++++|++|++++|+++. .+..+.++++|++|++++|
T Consensus 105 L~Ls~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n 181 (330)
T 1xku_A 105 LYLSKNQLKE-LPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADT 181 (330)
T ss_dssp EECCSSCCSB-CCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSS
T ss_pred EECCCCcCCc-cChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCC
Confidence 9999999994 455544 799999999999998888889999999999999999974 5678999999999999999
Q ss_pred CCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCc
Q 047576 254 DIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPG 333 (602)
Q Consensus 254 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 333 (602)
.++. +|..+. ++|++|++++|.+++..|..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|+++ .+|.
T Consensus 182 ~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 257 (330)
T 1xku_A 182 NITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPG 257 (330)
T ss_dssp CCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCT
T ss_pred cccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCCh
Confidence 9985 565543 89999999999999998999999999999999999999888888999999999999999999 7888
Q ss_pred ccccccccccccccCCcCCCccCCCC
Q 047576 334 EITKLSRLDYLNLSGNKLSGRVPYSN 359 (602)
Q Consensus 334 ~~~~l~~L~~L~l~~N~l~g~~p~~~ 359 (602)
.+..+++|++|++++|++++..+..+
T Consensus 258 ~l~~l~~L~~L~l~~N~i~~~~~~~f 283 (330)
T 1xku_A 258 GLADHKYIQVVYLHNNNISAIGSNDF 283 (330)
T ss_dssp TTTTCSSCCEEECCSSCCCCCCTTSS
T ss_pred hhccCCCcCEEECCCCcCCccChhhc
Confidence 99999999999999999998766655
No 283
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=1.3e-26 Score=266.81 Aligned_cols=246 Identities=21% Similarity=0.267 Sum_probs=182.7
Q ss_pred CCEEEEEecCCCCCCCc-----------------cccc-CCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECc
Q 047576 102 GSIIGLHLSKDNVNFNG-----------------RLSH-LNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLS 163 (602)
Q Consensus 102 ~~v~~l~l~~~~~~~~~-----------------~l~~-~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls 163 (602)
.++..|+++...+ .| .++. +.|..+++|+.|++. .+++.+.+|..|+++++|++|+|+
T Consensus 448 ~~L~~L~Ls~N~L--sg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls--~N~l~~~iP~~l~~L~~L~~L~Ls 523 (876)
T 4ecn_A 448 TKLQIIYFANSPF--TYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY--NCPNMTQLPDFLYDLPELQSLNIA 523 (876)
T ss_dssp TTCCEEEEESCCC--CGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE--SCTTCCSCCGGGGGCSSCCEEECT
T ss_pred CCCCEEECcCCcC--CCCcccccccccccccccccCChhhhhccCCCCCEEECc--CCCCCccChHHHhCCCCCCEEECc
Confidence 4567788876543 34 2433 224488889998887 778899999999999999999999
Q ss_pred CCc-Ccc-c--------------CCCcCEEECcCCcCCCCCch--hhhCCCCCCEEEecCCCCCCCCcccccCcCCCcee
Q 047576 164 SNR-LRG-R--------------LTNLNYMSLSRNMLGGLLPQ--EIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKIL 225 (602)
Q Consensus 164 ~N~-i~~-~--------------l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 225 (602)
+|+ ++| . +++|++|+|++|+++ .+|. .|+++++|++|+|++|+++ .+| .|+.+++|+.|
T Consensus 524 ~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L 600 (876)
T 4ecn_A 524 CNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDL 600 (876)
T ss_dssp TCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEE
T ss_pred CCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEE
Confidence 998 876 2 349999999999999 7888 9999999999999999998 888 89999999999
Q ss_pred ecccccCCCCcccccCCCC-CcEEEccCCCCCCCCCCccCCCCC--CccccCCCCcCCCCCchh---hh--CCCCCCEEe
Q 047576 226 ILAQNQLSGLPQEIGNLKN-LMLLDVGNNDIIGPIPSTLGLFSD--LSYLDLSCNQFNSSIPNE---LT--RLTQLFHLD 297 (602)
Q Consensus 226 ~L~~N~l~~ip~~~~~l~~-L~~L~L~~N~l~~~~p~~l~~l~~--L~~L~L~~N~l~~~~p~~---~~--~l~~L~~L~ 297 (602)
+|++|+++.+|..+.++++ |+.|+|++|+++ .+|..+..++. |+.|+|++|++++.+|.. +. .+++|+.|+
T Consensus 601 ~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~ 679 (876)
T 4ecn_A 601 KLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVT 679 (876)
T ss_dssp ECCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEE
T ss_pred ECcCCccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEE
Confidence 9999999999999999998 999999999998 77877766654 778888888777765521 12 223566666
Q ss_pred ccCCCCCCCCCccc-CCCCCCCEEeCCCCCCCCCCCccccc--------ccccccccccCCcCCCccCCC
Q 047576 298 LSSNKLSGKIPSQI-ASMEDLTWLDLSNNNIKGSIPGEITK--------LSRLDYLNLSGNKLSGRVPYS 358 (602)
Q Consensus 298 Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~--------l~~L~~L~l~~N~l~g~~p~~ 358 (602)
|++|+|+ .+|..+ ..+++|+.|+|++|+++ .+|..+.. +++|+.|+|++|+++ .+|..
T Consensus 680 Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~ 746 (876)
T 4ecn_A 680 LSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDD 746 (876)
T ss_dssp CCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGG
T ss_pred ccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHH
Confidence 6666666 334332 35566666666666665 33433322 125666666666665 44443
No 284
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.94 E-value=5e-27 Score=262.80 Aligned_cols=246 Identities=22% Similarity=0.239 Sum_probs=202.5
Q ss_pred CEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCc-----ccCCCcCEE
Q 047576 103 SIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLR-----GRLTNLNYM 177 (602)
Q Consensus 103 ~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~-----~~l~~L~~L 177 (602)
.+..++++...+. .++ .+..+++|+.|++. .+.+ +.+| .+ .+++|++|++++|+.. +.+++|++|
T Consensus 286 ~L~~L~l~~~~~~---~l~--~l~~~~~L~~L~l~--~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L 355 (606)
T 3vq2_A 286 NVSAMSLAGVSIK---YLE--DVPKHFKWQSLSII--RCQL-KQFP-TL-DLPFLKSLTLTMNKGSISFKKVALPSLSYL 355 (606)
T ss_dssp TCSEEEEESCCCC---CCC--CCCTTCCCSEEEEE--SCCC-SSCC-CC-CCSSCCEEEEESCSSCEECCCCCCTTCCEE
T ss_pred CCCEEEecCccch---hhh--hccccccCCEEEcc--cccC-cccc-cC-CCCccceeeccCCcCccchhhccCCCCCEE
Confidence 4556666544332 222 35556666666665 3444 8888 55 8999999999999544 358899999
Q ss_pred ECcCCcCCCC--CchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCC-c-ccccCCCCCcEEEccCC
Q 047576 178 SLSRNMLGGL--LPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGL-P-QEIGNLKNLMLLDVGNN 253 (602)
Q Consensus 178 ~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~i-p-~~~~~l~~L~~L~L~~N 253 (602)
+|++|++++. .|..+..+++|++|+|++|.+++ +|..+.++++|+.|++++|+++++ | ..+.++++|++|++++|
T Consensus 356 ~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n 434 (606)
T 3vq2_A 356 DLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYT 434 (606)
T ss_dssp ECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTS
T ss_pred ECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCC
Confidence 9999999876 48889999999999999999875 567888999999999999999985 4 47888999999999999
Q ss_pred CCCCCCCCccCCCCCCccccCCCCcCCC-CCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCC
Q 047576 254 DIIGPIPSTLGLFSDLSYLDLSCNQFNS-SIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIP 332 (602)
Q Consensus 254 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 332 (602)
.+++..|..+..+++|++|++++|.+++ .+|..++.+++|+.|+|++|++++..|..+..+++|+.|+|++|++++.+|
T Consensus 435 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 514 (606)
T 3vq2_A 435 NTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDS 514 (606)
T ss_dssp CCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEG
T ss_pred CCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCH
Confidence 9999889999999999999999999988 478888999999999999999998888889999999999999999998889
Q ss_pred cccccccccccccccCCcCCCccCCCCC
Q 047576 333 GEITKLSRLDYLNLSGNKLSGRVPYSNK 360 (602)
Q Consensus 333 ~~~~~l~~L~~L~l~~N~l~g~~p~~~~ 360 (602)
..+..+++|+.|++++|+++ .+|..+.
T Consensus 515 ~~~~~l~~L~~L~l~~N~l~-~~p~~~~ 541 (606)
T 3vq2_A 515 SHYNQLYSLSTLDCSFNRIE-TSKGILQ 541 (606)
T ss_dssp GGTTTCTTCCEEECTTSCCC-CEESCGG
T ss_pred HHccCCCcCCEEECCCCcCc-ccCHhHh
Confidence 99999999999999999998 5665543
No 285
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=4.4e-28 Score=248.84 Aligned_cols=195 Identities=24% Similarity=0.284 Sum_probs=107.5
Q ss_pred CCCCCCEEECcCCcCcc---------cCCCcCEEECcCCcCCCCCchhhhCC-----CCCCEEEecCCCCCCCCcccccC
Q 047576 153 ALSKLQLLDLSSNRLRG---------RLTNLNYMSLSRNMLGGLLPQEIGNL-----KNLIELDVGDNSLIGPIPLTLSR 218 (602)
Q Consensus 153 ~L~~L~~L~Ls~N~i~~---------~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~l~~ 218 (602)
++++|++|+|++|++++ .+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..+++
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 55566666666665542 245566666666666555 5555555 56666666666665555555666
Q ss_pred cCCCceeecccccCCC---Ccccc--cCCCCCcEEEccCCCCCCC--CC-CccCCCCCCccccCCCCcCCCCCc-hhhhC
Q 047576 219 LTSLKILILAQNQLSG---LPQEI--GNLKNLMLLDVGNNDIIGP--IP-STLGLFSDLSYLDLSCNQFNSSIP-NELTR 289 (602)
Q Consensus 219 l~~L~~L~L~~N~l~~---ip~~~--~~l~~L~~L~L~~N~l~~~--~p-~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~ 289 (602)
+++|++|+|++|++++ +|..+ .++++|++|+|++|++++. ++ ..+..+++|++|+|++|++++.+| ..+..
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 6666666666665554 23333 5555666666666665521 11 222345556666666666655543 23444
Q ss_pred CCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCC
Q 047576 290 LTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSG 353 (602)
Q Consensus 290 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 353 (602)
+++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|++++|++++
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 555666666666665 4454444 5566666666666544 33 5555666666666665554
No 286
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.94 E-value=2.2e-26 Score=258.12 Aligned_cols=127 Identities=29% Similarity=0.368 Sum_probs=103.7
Q ss_pred CEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCc-------ccCCCcC
Q 047576 103 SIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLR-------GRLTNLN 175 (602)
Q Consensus 103 ~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~-------~~l~~L~ 175 (602)
.++.|+|+.+.+. .++.-.|..+++|+.|++. ++.+.+..|.+|.+|++|++|+|++|+|+ +.+++|+
T Consensus 53 ~~~~LdLs~N~i~---~l~~~~f~~l~~L~~L~Ls--~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~ 127 (635)
T 4g8a_A 53 STKNLDLSFNPLR---HLGSYSFFSFPELQVLDLS--RCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQ 127 (635)
T ss_dssp TCCEEECTTSCCC---EECTTTTTTCTTCCEEECT--TCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCC
T ss_pred CCCEEEeeCCCCC---CCCHHHHhCCCCCCEEECC--CCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCC
Confidence 5788888765443 4555567777888888776 55666666678999999999999999987 3488999
Q ss_pred EEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCC-CCcccccCcCCCceeecccccCCC
Q 047576 176 YMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIG-PIPLTLSRLTSLKILILAQNQLSG 234 (602)
Q Consensus 176 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~ 234 (602)
+|+|++|+|++..+..|+++++|++|+|++|.+++ .+|..++.+++|++|+|++|++++
T Consensus 128 ~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 187 (635)
T 4g8a_A 128 KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 187 (635)
T ss_dssp EEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE
T ss_pred EEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccc
Confidence 99999999998888889999999999999999976 467888889999999999888765
No 287
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=1.9e-28 Score=251.61 Aligned_cols=221 Identities=24% Similarity=0.276 Sum_probs=188.7
Q ss_pred CCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc---------------cCCCcCEEECcCCcCCCCCch
Q 047576 126 SCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG---------------RLTNLNYMSLSRNMLGGLLPQ 190 (602)
Q Consensus 126 ~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~---------------~l~~L~~L~L~~N~l~~~~p~ 190 (602)
+..++|+.|++. ++.+ .+|..+... |++|+|++|++.. .+++|++|+|++|++++.+|.
T Consensus 40 ~~~~~L~~l~l~--~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 40 GGGRSLEYLLKR--VDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEECTTHHHH--CCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred ccCCCceeEeec--cccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 334567777765 4555 788876655 9999999999952 489999999999999999999
Q ss_pred hh--hCCCCCCEEEecCCCCCCCCcccccCc-----CCCceeecccccCCCCc-ccccCCCCCcEEEccCCCCCCC--CC
Q 047576 191 EI--GNLKNLIELDVGDNSLIGPIPLTLSRL-----TSLKILILAQNQLSGLP-QEIGNLKNLMLLDVGNNDIIGP--IP 260 (602)
Q Consensus 191 ~~--~~l~~L~~L~L~~N~l~~~~p~~l~~l-----~~L~~L~L~~N~l~~ip-~~~~~l~~L~~L~L~~N~l~~~--~p 260 (602)
.+ +.+++|++|+|++|++++. |..++.+ ++|++|+|++|+++++| ..++++++|++|+|++|+++|. .|
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 87 9999999999999999987 8888888 99999999999999965 7899999999999999999875 33
Q ss_pred Ccc--CCCCCCccccCCCCcCCCC--Cc-hhhhCCCCCCEEeccCCCCCCCCC-cccCCCCCCCEEeCCCCCCCCCCCcc
Q 047576 261 STL--GLFSDLSYLDLSCNQFNSS--IP-NELTRLTQLFHLDLSSNKLSGKIP-SQIASMEDLTWLDLSNNNIKGSIPGE 334 (602)
Q Consensus 261 ~~l--~~l~~L~~L~L~~N~l~~~--~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~ 334 (602)
..+ ..+++|++|+|++|++++. ++ ..+..+++|++|+|++|++++.+| ..+..+++|+.|+|++|+++ .+|..
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~ 271 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG 271 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSS
T ss_pred HHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhh
Confidence 344 8899999999999999842 23 345688999999999999998775 45677899999999999999 77887
Q ss_pred cccccccccccccCCcCCCccCC
Q 047576 335 ITKLSRLDYLNLSGNKLSGRVPY 357 (602)
Q Consensus 335 ~~~l~~L~~L~l~~N~l~g~~p~ 357 (602)
+. ++|+.|++++|++++. |.
T Consensus 272 ~~--~~L~~L~Ls~N~l~~~-p~ 291 (312)
T 1wwl_A 272 LP--AKLSVLDLSYNRLDRN-PS 291 (312)
T ss_dssp CC--SEEEEEECCSSCCCSC-CC
T ss_pred cc--CCceEEECCCCCCCCC-hh
Confidence 76 8999999999999987 54
No 288
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.94 E-value=1.4e-26 Score=269.02 Aligned_cols=249 Identities=23% Similarity=0.261 Sum_probs=202.1
Q ss_pred CCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc---------cCC
Q 047576 102 GSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG---------RLT 172 (602)
Q Consensus 102 ~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~---------~l~ 172 (602)
.+.+.|+++..+ ..+.+..-.|+.+++|+.|++. ++.+.+..|..|+++++|++|+|++|++++ .++
T Consensus 48 ~~L~~LdLs~n~--~~~~i~~~~f~~L~~L~~L~Ls--~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~ 123 (844)
T 3j0a_A 48 EQLQLLELGSQY--TPLTIDKEAFRNLPNLRILDLG--SSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLK 123 (844)
T ss_dssp CSCSEEEECTTC--CCCEECTTTTSSCTTCCEEECT--TCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCS
T ss_pred ccCeEEeCCCCC--CccccCHHHhcCCCCCCEEECC--CCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccC
Confidence 356677776542 2455656667788888888876 667777778888888889999998888864 367
Q ss_pred CcCEEECcCCcCCCCCc-hhhhCCCCCCEEEecCCCCCCCCcccccCc--CC----------------------------
Q 047576 173 NLNYMSLSRNMLGGLLP-QEIGNLKNLIELDVGDNSLIGPIPLTLSRL--TS---------------------------- 221 (602)
Q Consensus 173 ~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l--~~---------------------------- 221 (602)
+|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..|..+..+ ++
T Consensus 124 ~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~ 203 (844)
T 3j0a_A 124 ALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRN 203 (844)
T ss_dssp SCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTT
T ss_pred CCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCcccc
Confidence 88888888888887755 578888888888888888887777666554 34
Q ss_pred --CceeecccccCCC-CcccccC--------------------------------------CCCCcEEEccCCCCCCCCC
Q 047576 222 --LKILILAQNQLSG-LPQEIGN--------------------------------------LKNLMLLDVGNNDIIGPIP 260 (602)
Q Consensus 222 --L~~L~L~~N~l~~-ip~~~~~--------------------------------------l~~L~~L~L~~N~l~~~~p 260 (602)
|+.|++++|++++ +|..+.. .++|+.|++++|.+++..|
T Consensus 204 ~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~ 283 (844)
T 3j0a_A 204 MVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNS 283 (844)
T ss_dssp CCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECS
T ss_pred CceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccCh
Confidence 5555555555544 3322211 2578888899998888888
Q ss_pred CccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccc
Q 047576 261 STLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSR 340 (602)
Q Consensus 261 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 340 (602)
..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..|..+..+++|+.|++++|++++..+..+..+++
T Consensus 284 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 363 (844)
T 3j0a_A 284 RVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEK 363 (844)
T ss_dssp CCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCC
T ss_pred hhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCC
Confidence 89999999999999999999999999999999999999999999988999999999999999999999888889999999
Q ss_pred cccccccCCcCCCc
Q 047576 341 LDYLNLSGNKLSGR 354 (602)
Q Consensus 341 L~~L~l~~N~l~g~ 354 (602)
|+.|++++|.+++.
T Consensus 364 L~~L~Ls~N~l~~i 377 (844)
T 3j0a_A 364 LQTLDLRDNALTTI 377 (844)
T ss_dssp CCEEEEETCCSCCC
T ss_pred CCEEECCCCCCCcc
Confidence 99999999999863
No 289
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=9.3e-27 Score=234.44 Aligned_cols=208 Identities=29% Similarity=0.344 Sum_probs=179.1
Q ss_pred cCCccCCCCCCCCEEECcCCcCcc-------cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccC
Q 047576 146 SIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSR 218 (602)
Q Consensus 146 ~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 218 (602)
.+|..+. ++|++|+|++|+|++ .+++|++|+|++|++++..+..|.++++|++|+|++|++++..|..+.+
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC
Confidence 4555443 478889999988872 4688999999999999888889999999999999999999888889999
Q ss_pred cCCCceeecccccCCCCcc-cccCCCCCcEEEccCCCCCCC-CCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCC--
Q 047576 219 LTSLKILILAQNQLSGLPQ-EIGNLKNLMLLDVGNNDIIGP-IPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLF-- 294 (602)
Q Consensus 219 l~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-- 294 (602)
+++|++|++++|++++++. .++++++|++|++++|++++. +|..+..+++|++|++++|++++..+..+..+++|+
T Consensus 99 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l 178 (276)
T 2z62_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178 (276)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTC
T ss_pred CccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcccc
Confidence 9999999999999999654 689999999999999999874 688999999999999999999988887787777776
Q ss_pred --EEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccC
Q 047576 295 --HLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVP 356 (602)
Q Consensus 295 --~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 356 (602)
.|++++|++++..+..+. ..+|+.|+|++|++++..+..+..+++|+.|++++|++++..|
T Consensus 179 ~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 179 NLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 899999999976555554 4589999999999998877778999999999999999998765
No 290
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.94 E-value=2.6e-26 Score=230.85 Aligned_cols=204 Identities=27% Similarity=0.349 Sum_probs=185.1
Q ss_pred cCCCCCCCCEEECcCCcCc-----ccCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCce
Q 047576 150 EISALSKLQLLDLSSNRLR-----GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKI 224 (602)
Q Consensus 150 ~l~~L~~L~~L~Ls~N~i~-----~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 224 (602)
.+..+++|+.|++++|.+. +.+++|++|+|++|.+++. +.++.+++|++|+|++|++++..+..+.++++|++
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 113 (272)
T 3rfs_A 36 TQNELNSIDQIIANNSDIKSVQGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKE 113 (272)
T ss_dssp CHHHHTTCCEEECTTSCCCCCTTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred ccccccceeeeeeCCCCcccccccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCE
Confidence 3567889999999999987 3589999999999999974 58999999999999999999888888999999999
Q ss_pred eecccccCCCCcc-cccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCC
Q 047576 225 LILAQNQLSGLPQ-EIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKL 303 (602)
Q Consensus 225 L~L~~N~l~~ip~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 303 (602)
|++++|+++++|. .++++++|++|++++|++++..+..+..+++|++|++++|++++..+..++.+++|+.|+|++|++
T Consensus 114 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 193 (272)
T 3rfs_A 114 LVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQL 193 (272)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcC
Confidence 9999999999655 578999999999999999988888889999999999999999988888889999999999999999
Q ss_pred CCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccCCCCCcC
Q 047576 304 SGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYSNKHL 362 (602)
Q Consensus 304 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l 362 (602)
++..|..+..+++|+.|++++|.+.+. +++|+.|+++.|.++|.+|.....+
T Consensus 194 ~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 194 KSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred CccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccccc
Confidence 998888899999999999999999865 4478999999999999999886433
No 291
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.94 E-value=2.3e-26 Score=233.48 Aligned_cols=202 Identities=24% Similarity=0.246 Sum_probs=183.0
Q ss_pred cCCCCCCCCEEECcCCcCcc----cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCcee
Q 047576 150 EISALSKLQLLDLSSNRLRG----RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKIL 225 (602)
Q Consensus 150 ~l~~L~~L~~L~Ls~N~i~~----~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 225 (602)
.++++++|+++++++|+++. ..++|++|+|++|.+++..+..|.++++|++|+|++|+|++..+ .+.+++|++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~ip~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 82 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGTL 82 (290)
T ss_dssp EEECSTTCCEEECTTSCCSSCCSCCCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCEE
T ss_pred cccccCCccEEECCCCCCCcCCCCCCCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCCEE
Confidence 36778889999999998874 35689999999999999999999999999999999999986433 3789999999
Q ss_pred ecccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCC
Q 047576 226 ILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSG 305 (602)
Q Consensus 226 ~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 305 (602)
+|++|+++.+|..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|++|+|++
T Consensus 83 ~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 162 (290)
T 1p9a_G 83 DLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (290)
T ss_dssp ECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred ECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCc
Confidence 99999999999999999999999999999998888899999999999999999998888888999999999999999997
Q ss_pred CCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCc
Q 047576 306 KIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGR 354 (602)
Q Consensus 306 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 354 (602)
..+..+..+++|+.|+|++|+++ .+|..+...++|+.|++++|++...
T Consensus 163 l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 163 LPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred cCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 77777899999999999999999 6788888889999999999998753
No 292
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.94 E-value=6.9e-28 Score=273.37 Aligned_cols=206 Identities=24% Similarity=0.329 Sum_probs=159.1
Q ss_pred CccccCcccccccccccceeeecC--CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcccccccccc-------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLP--NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDA------- 438 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~--~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~------- 438 (602)
.++|.....||+|+||.||+|+.. +|+.||||++...... .....+.+|+.++..+.|+++..++....
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDA--EAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCH--HHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCH--HHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 367999999999999999999864 6899999988654322 24467788999888887777765543110
Q ss_pred ------------------chhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeeccccccccc
Q 047576 439 ------------------EAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLH 500 (602)
Q Consensus 439 ------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~ 500 (602)
....+++.+++.|+.||+.||+||| +.+|+||||||+|||++.+ .+||+|||+++...
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp EEEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred ceeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 0124789999999999999999999 7899999999999999986 89999999998764
Q ss_pred CCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChh
Q 047576 501 ADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRK 580 (602)
Q Consensus 501 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 580 (602)
.. ....||+.|+|||++.+.. +.++|||||||++|+|++|..||..... . .++.. ..
T Consensus 233 ~~----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~--~--------------~~~~~--~~ 289 (681)
T 2pzi_A 233 SF----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV--D--------------GLPED--DP 289 (681)
T ss_dssp CC----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC--S--------------SCCTT--CH
T ss_pred cC----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc--c--------------ccccc--cc
Confidence 33 3357999999999987654 8899999999999999999999864210 0 01111 01
Q ss_pred hHHHHHHHHHHHhhccCcCCCC
Q 047576 581 VIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 581 ~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
.......+.+++.+||++||++
T Consensus 290 ~~~~~~~l~~li~~~l~~dP~~ 311 (681)
T 2pzi_A 290 VLKTYDSYGRLLRRAIDPDPRQ 311 (681)
T ss_dssp HHHHCHHHHHHHHHHTCSSGGG
T ss_pred ccccCHHHHHHHhhhccCChhh
Confidence 1223345889999999999974
No 293
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=3.2e-26 Score=247.28 Aligned_cols=213 Identities=24% Similarity=0.294 Sum_probs=189.9
Q ss_pred ccCCccCCCCCCCCEEECcCCcCcc-------cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCccccc
Q 047576 145 GSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLS 217 (602)
Q Consensus 145 ~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 217 (602)
..+|..+. ++|++|+|++|+|++ .+++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|.
T Consensus 67 ~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 144 (452)
T 3zyi_A 67 SEVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFE 144 (452)
T ss_dssp SSCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSS
T ss_pred CccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhc
Confidence 34565544 689999999999973 488999999999999999999999999999999999999988888899
Q ss_pred CcCCCceeecccccCCCCcc-cccCCCCCcEEEccCCC-CCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCE
Q 047576 218 RLTSLKILILAQNQLSGLPQ-EIGNLKNLMLLDVGNND-IIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFH 295 (602)
Q Consensus 218 ~l~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 295 (602)
++++|++|+|++|+++++|. .+.++++|+.|++++|+ +....+..|..+++|++|+|++|++++. | .+..+++|+.
T Consensus 145 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~ 222 (452)
T 3zyi_A 145 YLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEE 222 (452)
T ss_dssp SCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCE
T ss_pred ccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccE
Confidence 99999999999999999654 78999999999999954 5444445799999999999999999864 4 5889999999
Q ss_pred EeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccCCCCCc
Q 047576 296 LDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYSNKH 361 (602)
Q Consensus 296 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~ 361 (602)
|+|++|+|++..|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..
T Consensus 223 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 288 (452)
T 3zyi_A 223 LEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTP 288 (452)
T ss_dssp EECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTT
T ss_pred EECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcc
Confidence 999999999999999999999999999999999999999999999999999999999766655443
No 294
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.94 E-value=2.5e-26 Score=243.16 Aligned_cols=222 Identities=22% Similarity=0.264 Sum_probs=181.7
Q ss_pred CCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCc-------ccCCCcCEEECcCCcCCCCCchhhhCCC
Q 047576 124 NFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLR-------GRLTNLNYMSLSRNMLGGLLPQEIGNLK 196 (602)
Q Consensus 124 ~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~-------~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 196 (602)
.|+.+++|+.|++. .+.+.+..|..|+++++|++|+|++|+|+ +.+++|++|+|++|.+++..|..|++++
T Consensus 88 ~~~~l~~L~~L~L~--~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 165 (390)
T 3o6n_A 88 AFAYAHTIQKLYMG--FNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATT 165 (390)
T ss_dssp TTTTCTTCCEEECC--SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCT
T ss_pred hccCCCCcCEEECC--CCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCC
Confidence 45666777777765 55666666778999999999999999987 3478999999999999999999999999
Q ss_pred CCCEEEecCCCCCCCCcccccCcCCC-------------------ceeecccccCCCCcccccCCCCCcEEEccCCCCCC
Q 047576 197 NLIELDVGDNSLIGPIPLTLSRLTSL-------------------KILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIG 257 (602)
Q Consensus 197 ~L~~L~L~~N~l~~~~p~~l~~l~~L-------------------~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~ 257 (602)
+|++|+|++|++++.. +..+++| +.|++++|+++.+|.. ..++|+.|++++|.+++
T Consensus 166 ~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~--~~~~L~~L~l~~n~l~~ 240 (390)
T 3o6n_A 166 SLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGP--VNVELTILKLQHNNLTD 240 (390)
T ss_dssp TCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECC--CCSSCCEEECCSSCCCC
T ss_pred CCCEEECCCCcCCccc---cccccccceeecccccccccCCCCcceEEECCCCeeeecccc--ccccccEEECCCCCCcc
Confidence 9999999999998753 3334444 4455555555544432 23689999999999986
Q ss_pred CCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCccccc
Q 047576 258 PIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITK 337 (602)
Q Consensus 258 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 337 (602)
. ..+..+++|++|++++|.+++..|..+..+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..
T Consensus 241 ~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~ 316 (390)
T 3o6n_A 241 T--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQ 316 (390)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHH
T ss_pred c--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccc
Confidence 4 568889999999999999999889999999999999999999985 5667788999999999999998 56777888
Q ss_pred ccccccccccCCcCCCccC
Q 047576 338 LSRLDYLNLSGNKLSGRVP 356 (602)
Q Consensus 338 l~~L~~L~l~~N~l~g~~p 356 (602)
+++|+.|++++|++++...
T Consensus 317 l~~L~~L~L~~N~i~~~~~ 335 (390)
T 3o6n_A 317 FDRLENLYLDHNSIVTLKL 335 (390)
T ss_dssp HTTCSEEECCSSCCCCCCC
T ss_pred cCcCCEEECCCCccceeCc
Confidence 9999999999999987543
No 295
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.8e-26 Score=257.94 Aligned_cols=224 Identities=22% Similarity=0.228 Sum_probs=191.2
Q ss_pred CCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-------cCCCcCEEECcCCcCCCCCchhhhCCC
Q 047576 124 NFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLK 196 (602)
Q Consensus 124 ~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~ 196 (602)
.|+.+++|+.|++. ++.+.+..|..|+++++|++|+|++|.|++ .+++|++|+|++|.+++..|..|++++
T Consensus 94 ~~~~l~~L~~L~L~--~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 171 (597)
T 3oja_B 94 AFAYAHTIQKLYMG--FNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATT 171 (597)
T ss_dssp TTTTCTTCCEEECC--SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCT
T ss_pred HhcCCCCCCEEECC--CCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCC
Confidence 56677777777776 566777667789999999999999999873 478999999999999999999999999
Q ss_pred CCCEEEecCCCCCCCCcccccCc-------------------------------------CCCceeecccccCCCCcccc
Q 047576 197 NLIELDVGDNSLIGPIPLTLSRL-------------------------------------TSLKILILAQNQLSGLPQEI 239 (602)
Q Consensus 197 ~L~~L~L~~N~l~~~~p~~l~~l-------------------------------------~~L~~L~L~~N~l~~ip~~~ 239 (602)
+|++|+|++|.+++..+..+.++ ++|+.|+|++|.+++. ..+
T Consensus 172 ~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~~-~~l 250 (597)
T 3oja_B 172 SLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT-AWL 250 (597)
T ss_dssp TCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCCC-GGG
T ss_pred cCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEEECCCCCCCCC-hhh
Confidence 99999999999987543333322 2366666666666664 468
Q ss_pred cCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCE
Q 047576 240 GNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTW 319 (602)
Q Consensus 240 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 319 (602)
+++++|+.|+|++|.+++.+|..|+.+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.
T Consensus 251 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~ 328 (597)
T 3oja_B 251 LNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLEN 328 (597)
T ss_dssp GGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSE
T ss_pred ccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCE
Confidence 899999999999999999999999999999999999999997 5667788999999999999999 57888899999999
Q ss_pred EeCCCCCCCCCCCcccccccccccccccCCcCCCcc
Q 047576 320 LDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRV 355 (602)
Q Consensus 320 L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~ 355 (602)
|+|++|++++.. +..+++|+.|++++|++++..
T Consensus 329 L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 329 LYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp EECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHH
T ss_pred EECCCCCCCCcC---hhhcCCCCEEEeeCCCCCChh
Confidence 999999999653 677889999999999998754
No 296
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.94 E-value=5.6e-26 Score=252.11 Aligned_cols=121 Identities=23% Similarity=0.306 Sum_probs=88.1
Q ss_pred CCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCc-hhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEe
Q 047576 243 KNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIP-NELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLD 321 (602)
Q Consensus 243 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 321 (602)
++|++|++++|.+++..+ .+..+++|++|++++|.+++..| ..+.++++|++|++++|++++..|..+..+++|+.|+
T Consensus 373 ~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 451 (570)
T 2z63_A 373 TSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 451 (570)
T ss_dssp SCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred CccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEE
Confidence 334444444444433222 25667788888888888877665 4677888888888888888888888888888888888
Q ss_pred CCCCCCC-CCCCcccccccccccccccCCcCCCccCCCCCcCCC
Q 047576 322 LSNNNIK-GSIPGEITKLSRLDYLNLSGNKLSGRVPYSNKHLSS 364 (602)
Q Consensus 322 L~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~ 364 (602)
+++|+++ +.+|..+..+++|+.|++++|++++..|..+..+..
T Consensus 452 l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 495 (570)
T 2z63_A 452 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSS 495 (570)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred CcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccC
Confidence 8888887 567888888888888888888888877776654433
No 297
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=6.3e-26 Score=244.06 Aligned_cols=215 Identities=28% Similarity=0.336 Sum_probs=191.6
Q ss_pred cccCCccCCCCCCCCEEECcCCcCc-------ccCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccc
Q 047576 144 TGSIPSEISALSKLQLLDLSSNRLR-------GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTL 216 (602)
Q Consensus 144 ~~~ip~~l~~L~~L~~L~Ls~N~i~-------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 216 (602)
...+|..+. ++++.|+|++|+|+ +.+++|++|+|++|.|++..+..|.++++|++|+|++|+|++..+..|
T Consensus 55 l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 132 (440)
T 3zyj_A 55 LREVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAF 132 (440)
T ss_dssp CSSCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTS
T ss_pred cCcCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHh
Confidence 345676654 78999999999997 358899999999999999999999999999999999999998777789
Q ss_pred cCcCCCceeecccccCCCCcc-cccCCCCCcEEEccCCC-CCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCC
Q 047576 217 SRLTSLKILILAQNQLSGLPQ-EIGNLKNLMLLDVGNND-IIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLF 294 (602)
Q Consensus 217 ~~l~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 294 (602)
.++++|++|+|++|+++.+|. .+.++++|+.|+|++|+ ++...+..|.++++|++|+|++|+++. +| .+..+++|+
T Consensus 133 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~ 210 (440)
T 3zyj_A 133 VYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLD 210 (440)
T ss_dssp CSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCC
T ss_pred hccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-ccCCCcccC
Confidence 999999999999999999654 78999999999999955 444445579999999999999999984 55 588999999
Q ss_pred EEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccCCCCCcC
Q 047576 295 HLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYSNKHL 362 (602)
Q Consensus 295 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l 362 (602)
.|+|++|+|++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+
T Consensus 211 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 211 ELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred EEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 99999999999889999999999999999999999999999999999999999999998766555433
No 298
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.94 E-value=6.4e-26 Score=257.33 Aligned_cols=234 Identities=21% Similarity=0.230 Sum_probs=180.1
Q ss_pred CCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCccc-----------CCCcCEEECcCCcCCCCCchhh
Q 047576 124 NFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRGR-----------LTNLNYMSLSRNMLGGLLPQEI 192 (602)
Q Consensus 124 ~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~~-----------l~~L~~L~L~~N~l~~~~p~~~ 192 (602)
.|+.+++|+.|++. .+.+.+..|..|.++++|++|+|++|.++.. .++|++|+|++|++++..|..|
T Consensus 324 ~~~~l~~L~~L~l~--~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~ 401 (680)
T 1ziw_A 324 SFQWLKCLEHLNME--DNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAF 401 (680)
T ss_dssp TTTTCTTCCEEECC--SCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTT
T ss_pred hcccCCCCCEEECC--CCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhh
Confidence 45566666666665 5566666677788888888888888875421 2578888888888888888888
Q ss_pred hCCCCCCEEEecCCCCCCCCc-ccccCcCCCceeecccccCCC-CcccccCCCCCcEEEccCCCCC--CCCCCccCCCCC
Q 047576 193 GNLKNLIELDVGDNSLIGPIP-LTLSRLTSLKILILAQNQLSG-LPQEIGNLKNLMLLDVGNNDII--GPIPSTLGLFSD 268 (602)
Q Consensus 193 ~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~ 268 (602)
..+++|++|+|++|.+++.+| ..+.++++|++|++++|++++ .+..+..+++|+.|++++|.++ +.+|..+..+++
T Consensus 402 ~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~ 481 (680)
T 1ziw_A 402 SWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRN 481 (680)
T ss_dssp TTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTT
T ss_pred hCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCC
Confidence 888999999999998887666 578888888888888888887 4557777888888888888876 567778888888
Q ss_pred CccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCC--------cccCCCCCCCEEeCCCCCCCCCCCcccccccc
Q 047576 269 LSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIP--------SQIASMEDLTWLDLSNNNIKGSIPGEITKLSR 340 (602)
Q Consensus 269 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 340 (602)
|+.|++++|++++..|..|..+++|++|+|++|++++..+ ..+..+++|+.|+|++|+++...+..|..+++
T Consensus 482 L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~ 561 (680)
T 1ziw_A 482 LTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFE 561 (680)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred CCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccC
Confidence 8888888888887777778888888888888888775321 23677788888888888888555556788888
Q ss_pred cccccccCCcCCCccCCCC
Q 047576 341 LDYLNLSGNKLSGRVPYSN 359 (602)
Q Consensus 341 L~~L~l~~N~l~g~~p~~~ 359 (602)
|+.|++++|++++..+..+
T Consensus 562 L~~L~Ls~N~l~~l~~~~~ 580 (680)
T 1ziw_A 562 LKIIDLGLNNLNTLPASVF 580 (680)
T ss_dssp CCEEECCSSCCCCCCTTTT
T ss_pred cceeECCCCCCCcCCHhHh
Confidence 8888888888876554443
No 299
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.94 E-value=1.8e-26 Score=253.49 Aligned_cols=229 Identities=23% Similarity=0.259 Sum_probs=187.3
Q ss_pred CCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-------cCCCcCEEECcCCcCCCCCchhhhCCCCCC
Q 047576 127 CFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLKNLI 199 (602)
Q Consensus 127 ~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 199 (602)
-.++|+.|++. ++.+.+..|..|.++++|++|+|++|+|++ .+++|++|+|++|+|+. +|.. .+++|+
T Consensus 19 ~~~~L~~L~Ls--~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~ 93 (520)
T 2z7x_B 19 LSQKTTILNIS--QNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH--PTVNLK 93 (520)
T ss_dssp CCTTCSEEECC--SSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC--CCCCCS
T ss_pred ccccccEEECC--CCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc--ccCCcc
Confidence 34788888887 666777777899999999999999999973 48899999999999994 5655 899999
Q ss_pred EEEecCCCCCC-CCcccccCcCCCceeecccccCCCCcccccCCCCC--cEEEccCCCC--CCCCCCccCCCC-------
Q 047576 200 ELDVGDNSLIG-PIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKNL--MLLDVGNNDI--IGPIPSTLGLFS------- 267 (602)
Q Consensus 200 ~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L--~~L~L~~N~l--~~~~p~~l~~l~------- 267 (602)
+|+|++|++++ .+|..++++++|++|++++|++++ ..+..+++| +.|++++|.+ ++..|..+..+.
T Consensus 94 ~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~ 171 (520)
T 2z7x_B 94 HLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK--SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIV 171 (520)
T ss_dssp EEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG--GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEE
T ss_pred EEeccCCccccccchhhhccCCcceEEEecCcccch--hhccccccceeeEEEeecccccccccccccccccccceEEEE
Confidence 99999999998 578999999999999999999987 356777888 9999999999 777777776633
Q ss_pred ----------------------------------------------------------------------------CCcc
Q 047576 268 ----------------------------------------------------------------------------DLSY 271 (602)
Q Consensus 268 ----------------------------------------------------------------------------~L~~ 271 (602)
+|++
T Consensus 172 l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~ 251 (520)
T 2z7x_B 172 FPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWY 251 (520)
T ss_dssp CCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSE
T ss_pred eccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccE
Confidence 6777
Q ss_pred ccCCCCcCCCCCchhh-----hCCCCCCEEeccCCCCCCCCCc-------------------------c-cCCCCCCCEE
Q 047576 272 LDLSCNQFNSSIPNEL-----TRLTQLFHLDLSSNKLSGKIPS-------------------------Q-IASMEDLTWL 320 (602)
Q Consensus 272 L~L~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~~p~-------------------------~-~~~l~~L~~L 320 (602)
|++++|.++|.+|..+ +.+++|+.+++++|.+ .+|. . +..+++|++|
T Consensus 252 L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L 329 (520)
T 2z7x_B 252 FSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHL 329 (520)
T ss_dssp EEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEE
T ss_pred EEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEE
Confidence 7777777877788777 6666666666666655 2331 0 2688999999
Q ss_pred eCCCCCCCCCCCcccccccccccccccCCcCCC--ccCCCCCcCCC
Q 047576 321 DLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSG--RVPYSNKHLSS 364 (602)
Q Consensus 321 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g--~~p~~~~~l~~ 364 (602)
++++|++++.+|..+..+++|+.|++++|++++ .+|..+..+..
T Consensus 330 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~ 375 (520)
T 2z7x_B 330 DFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKS 375 (520)
T ss_dssp ECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTT
T ss_pred EeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCC
Confidence 999999999999999999999999999999997 56654433333
No 300
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.94 E-value=2.8e-27 Score=239.74 Aligned_cols=199 Identities=11% Similarity=0.033 Sum_probs=139.3
Q ss_pred ccccCcccccccccccceeeecC-CCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCccccccccccc--------
Q 047576 369 RKIDSKYCIGTGAYGSVYKAQLP-NGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSLFRILHNDAE-------- 439 (602)
Q Consensus 369 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL~~~l~~~~~-------- 439 (602)
++|...+.||+|+||.||+|+.. +++.||||++...........+.+.+|+.++..+.|+++..++.....
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57999999999999999999875 589999999986654434456778889988866655555443321100
Q ss_pred ------------hhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCCcc
Q 047576 440 ------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQT 507 (602)
Q Consensus 440 ------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~~~ 507 (602)
.......++.+|+.|++.||+||| +.+|+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~------------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA------------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC-------------
T ss_pred EecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc-------------
Confidence 001244568889999999999999 7899999999999999999999997543
Q ss_pred ccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccCCCCCCChhhHHHHHH
Q 047576 508 LLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQRLPPPVDRKVIQDILL 587 (602)
Q Consensus 508 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 587 (602)
|++| ++.++|||||||++|||+||+.||............ ...+....+.+ ..........
T Consensus 175 -------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~ 235 (286)
T 3uqc_A 175 -------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA----ERDTAGQPIEP-ADIDRDIPFQ 235 (286)
T ss_dssp -------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC----CBCTTSCBCCH-HHHCTTSCHH
T ss_pred -------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH----HHHhccCCCCh-hhcccCCCHH
Confidence 3333 588999999999999999999999864332100000 00111111100 0000012234
Q ss_pred HHHHHhhccCcCCCC
Q 047576 588 VSTISFACLQSNPKS 602 (602)
Q Consensus 588 l~~l~~~Cl~~dP~e 602 (602)
+.+++.+||+.||++
T Consensus 236 l~~li~~~l~~dP~~ 250 (286)
T 3uqc_A 236 ISAVAARSVQGDGGI 250 (286)
T ss_dssp HHHHHHHHHCTTSSC
T ss_pred HHHHHHHHcccCCcc
Confidence 789999999999975
No 301
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.94 E-value=3.3e-26 Score=254.04 Aligned_cols=241 Identities=22% Similarity=0.267 Sum_probs=193.7
Q ss_pred EEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-------cCCCcCEE
Q 047576 105 IGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYM 177 (602)
Q Consensus 105 ~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~~L 177 (602)
..++++..++ +.+.....++++.|++. ++.+.+..|..|+++++|++|+|++|+|++ .+++|++|
T Consensus 34 ~~l~ls~~~L------~~ip~~~~~~L~~L~Ls--~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 105 (562)
T 3a79_B 34 SMVDYSNRNL------THVPKDLPPRTKALSLS--QNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYL 105 (562)
T ss_dssp CEEECTTSCC------CSCCTTSCTTCCEEECC--SSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEE
T ss_pred cEEEcCCCCC------ccCCCCCCCCcCEEECC--CCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEE
Confidence 4566654433 22333344788888887 667777667899999999999999999973 47899999
Q ss_pred ECcCCcCCCCCchhhhCCCCCCEEEecCCCCCC-CCcccccCcCCCceeecccccCCCCcccccCCCCC--cEEEccCCC
Q 047576 178 SLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIG-PIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKNL--MLLDVGNND 254 (602)
Q Consensus 178 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L--~~L~L~~N~ 254 (602)
+|++|+|+. +|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++. .+..+++| +.|++++|+
T Consensus 106 ~Ls~N~l~~-lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~--~~~~l~~L~L~~L~L~~n~ 180 (562)
T 3a79_B 106 DVSHNRLQN-ISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL--DLLPVAHLHLSCILLDLVS 180 (562)
T ss_dssp ECTTSCCCE-ECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT--TTGGGTTSCEEEEEEEESS
T ss_pred ECCCCcCCc-cCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC--chhhhhhceeeEEEeeccc
Confidence 999999994 5555 89999999999999987 4578999999999999999999873 34555666 999999999
Q ss_pred C--CCCCCCccCCCC-----------------------------------------------------------------
Q 047576 255 I--IGPIPSTLGLFS----------------------------------------------------------------- 267 (602)
Q Consensus 255 l--~~~~p~~l~~l~----------------------------------------------------------------- 267 (602)
+ ++..|..+..++
T Consensus 181 l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~ 260 (562)
T 3a79_B 181 YHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIE 260 (562)
T ss_dssp CCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEE
T ss_pred ccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCc
Confidence 9 888777766543
Q ss_pred ----------------CCccccCCCCcCCCCCchhh--------------------------------------------
Q 047576 268 ----------------DLSYLDLSCNQFNSSIPNEL-------------------------------------------- 287 (602)
Q Consensus 268 ----------------~L~~L~L~~N~l~~~~p~~~-------------------------------------------- 287 (602)
+|++|++++|.++|.+|..+
T Consensus 261 l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~ 340 (562)
T 3a79_B 261 TTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISD 340 (562)
T ss_dssp ECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEES
T ss_pred CcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccC
Confidence 77888888888888887655
Q ss_pred ---------hCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCC--CCcccccccccccccccCCcCCCccC
Q 047576 288 ---------TRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGS--IPGEITKLSRLDYLNLSGNKLSGRVP 356 (602)
Q Consensus 288 ---------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~l~~N~l~g~~p 356 (602)
..+++|++|+|++|++++.+|..+..+++|+.|+|++|++++. +|..+..+++|+.|++++|++++.+|
T Consensus 341 n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 420 (562)
T 3a79_B 341 TPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAY 420 (562)
T ss_dssp SCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCS
T ss_pred CCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccC
Confidence 5677888888888888888888888888888888888888863 35668888888888888888888776
Q ss_pred CC
Q 047576 357 YS 358 (602)
Q Consensus 357 ~~ 358 (602)
..
T Consensus 421 ~~ 422 (562)
T 3a79_B 421 DR 422 (562)
T ss_dssp SC
T ss_pred hh
Confidence 54
No 302
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.94 E-value=1.4e-27 Score=247.62 Aligned_cols=214 Identities=16% Similarity=0.147 Sum_probs=152.1
Q ss_pred CccccCcccccccccccceeeecCCCcEEeeeccCCchhH-----HHHHhhhhHhHHHHHHhhh----------------
Q 047576 368 PRKIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETE-----ELAFIRSFRNEAQVLSQME---------------- 426 (602)
Q Consensus 368 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-----~~~~~~~~~~E~~il~~l~---------------- 426 (602)
.++|...+.||+|+||.||+|+. +|+.||||++...... .....+.+.+|+.+++.+.
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46789999999999999999998 7899999998754211 1112245666766665554
Q ss_pred ------------------------------------------------cCccccccccccchhhhcHHHHHHHHHHHHHH
Q 047576 427 ------------------------------------------------RGSLFRILHNDAEAVELDWAKRVNIVKAMAHA 458 (602)
Q Consensus 427 ------------------------------------------------~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~ 458 (602)
+|++.+.+. ...+++.+++.|+.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~----~~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR----TKLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT----TTCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH----hcCCCHHHHHHHHHHHHHH
Confidence 222222221 2347899999999999999
Q ss_pred HHHhhhcCCCCeEEeCCCCCCeeeCCCC--------------------cceeecccccccccCCCCCccccccccccccc
Q 047576 459 LAYLHHDCSPSVVHRDISSNNILLNSKL--------------------EAFVADFGTARLLHADSSNQTLLAGSYGYIAP 518 (602)
Q Consensus 459 L~~LH~~~~~~ivH~DLkp~NILld~~~--------------------~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aP 518 (602)
|+|||+ +++|+||||||+|||++.++ .+||+|||+|+..... ...||+.|+||
T Consensus 174 L~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~aP 246 (336)
T 2vuw_A 174 LAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMDE 246 (336)
T ss_dssp HHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTCS
T ss_pred HHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccCh
Confidence 999992 35899999999999999887 8999999999876532 34799999999
Q ss_pred cccccCcCCccchhHHHHHH-HHHHHcCCCCCCCCcccccCCCcccchhhhhccC-CC-CCCChhhHHHHHHHHHHHhhc
Q 047576 519 ELAYTMVMTEKYDVYSFGVV-TLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQR-LP-PPVDRKVIQDILLVSTISFAC 595 (602)
Q Consensus 519 E~~~~~~~~~~~DvwSlGvi-l~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~-l~-~~~~~~~~~~~~~l~~l~~~C 595 (602)
|++.+.. +.++||||+|++ .+++++|..||....+. ......+++.. .. .+...........+.+++.+|
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~ 319 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWL------HYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTM 319 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHH------HHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHG
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhh------hHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHH
Confidence 9998776 889999998777 78899999998532110 00011122111 11 111122234556799999999
Q ss_pred cCcCC
Q 047576 596 LQSNP 600 (602)
Q Consensus 596 l~~dP 600 (602)
+++|+
T Consensus 320 L~~ds 324 (336)
T 2vuw_A 320 LNFSS 324 (336)
T ss_dssp GGSSS
T ss_pred hccCC
Confidence 99874
No 303
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.93 E-value=1e-26 Score=236.96 Aligned_cols=197 Identities=22% Similarity=0.282 Sum_probs=137.2
Q ss_pred CccccCc-ccccccccccceeeec-CCCcEEeeeccCCchhHHHHHhhhhHhHHHHH-----------------------
Q 047576 368 PRKIDSK-YCIGTGAYGSVYKAQL-PNGRVFALKKLNSPETEELAFIRSFRNEAQVL----------------------- 422 (602)
Q Consensus 368 t~~f~~~-~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il----------------------- 422 (602)
.++|... +.||+|+||.||+|+. .+++.||+|++.... .+.+|+.++
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 87 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP--------KARREVELHWRASQCPHIVRIVDVYENLYAGR 87 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSH--------HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecccH--------HHHHHHHHHHHhccCCCchhHHhhhhhhcCCC
Confidence 4567666 7899999999999986 478999999986432 233444443
Q ss_pred -------HhhhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCC---CCcceeec
Q 047576 423 -------SQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS---KLEAFVAD 492 (602)
Q Consensus 423 -------~~l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~---~~~~kL~D 492 (602)
||+++|+|.+++.... ...+++.++..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 88 KCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEEEEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred ceEEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEec
Confidence 4455566666655421 235899999999999999999999 789999999999999998 78899999
Q ss_pred ccccccccCCCCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCCCCCcccccCCCcccchhhhhccC
Q 047576 493 FGTARLLHADSSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRDLHSTLSSSYDPKIMLIDVLDQR 572 (602)
Q Consensus 493 FG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~d~~ 572 (602)
||++.... +..++.++||||+||++|||+||+.||............ ...+....
T Consensus 164 fg~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~---~~~~~~~~ 218 (299)
T 3m2w_A 164 FGFAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM---KTRIRMGQ 218 (299)
T ss_dssp CTTCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCS---CCSSCTTC
T ss_pred cccccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHH---HHHHhhcc
Confidence 99886532 134677999999999999999999999753321110000 01111111
Q ss_pred CCCCCChhhHHHHHHHHHHHhhccCcCCCC
Q 047576 573 LPPPVDRKVIQDILLVSTISFACLQSNPKS 602 (602)
Q Consensus 573 l~~~~~~~~~~~~~~l~~l~~~Cl~~dP~e 602 (602)
...+. .........+.+++.+||+.||++
T Consensus 219 ~~~~~-~~~~~~~~~~~~li~~~l~~dP~~ 247 (299)
T 3m2w_A 219 YEFPN-PEWSEVSEEVKMLIRNLLKTEPTQ 247 (299)
T ss_dssp CSSCH-HHHTTSCHHHHHHHHHHTCSSTTT
T ss_pred ccCCc-hhcccCCHHHHHHHHHHcccChhh
Confidence 11110 000112345889999999999975
No 304
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.93 E-value=4.2e-26 Score=253.10 Aligned_cols=227 Identities=24% Similarity=0.313 Sum_probs=124.2
Q ss_pred CCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCc----c----------------------cCCCcCEEE
Q 047576 125 FSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLR----G----------------------RLTNLNYMS 178 (602)
Q Consensus 125 ~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~----~----------------------~l~~L~~L~ 178 (602)
+..+++|+.|++. ++....+|..+..+ +|++|++++|.+. + .+++|++|+
T Consensus 278 ~~~l~~L~~L~l~---~~~l~~l~~~~~~~-~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~ 353 (570)
T 2z63_A 278 FNCLTNVSSFSLV---SVTIERVKDFSYNF-GWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLD 353 (570)
T ss_dssp TGGGTTCSEEEEE---SCEECSCCBCCSCC-CCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEE
T ss_pred hcCcCcccEEEec---CccchhhhhhhccC-CccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEe
Confidence 3444555555543 33344566666666 6666666666654 1 244555555
Q ss_pred CcCCcCCCCC--chhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCC-c-ccccCCCCCcEEEccCCC
Q 047576 179 LSRNMLGGLL--PQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGL-P-QEIGNLKNLMLLDVGNND 254 (602)
Q Consensus 179 L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~i-p-~~~~~l~~L~~L~L~~N~ 254 (602)
|++|.+++.. |..+.++++|++|++++|.+++..+. +..+++|++|++++|+++++ | ..+.++++|++|++++|.
T Consensus 354 l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~ 432 (570)
T 2z63_A 354 LSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 432 (570)
T ss_dssp CCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSC
T ss_pred CcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCc
Confidence 5555555433 44555555555555555555543322 55555555555555555553 2 244555555555555555
Q ss_pred CCCCCCCccCCCCCCccccCCCCcCC-CCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCc
Q 047576 255 IIGPIPSTLGLFSDLSYLDLSCNQFN-SSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPG 333 (602)
Q Consensus 255 l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 333 (602)
+++..|..+..+++|++|++++|.++ +.+|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|++++.+|.
T Consensus 433 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 512 (570)
T 2z63_A 433 TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDG 512 (570)
T ss_dssp CEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred ccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHH
Confidence 55555555555555555555555554 34555555555555555555555555555555555555555555555555555
Q ss_pred ccccccccccccccCCcCCCccC
Q 047576 334 EITKLSRLDYLNLSGNKLSGRVP 356 (602)
Q Consensus 334 ~~~~l~~L~~L~l~~N~l~g~~p 356 (602)
.+..+++|+.|++++|++++..|
T Consensus 513 ~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 513 IFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp TTTTCTTCCEEECCSSCBCCCTT
T ss_pred HhhcccCCcEEEecCCcccCCCc
Confidence 55555555555555555555544
No 305
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.1e-26 Score=253.06 Aligned_cols=219 Identities=26% Similarity=0.276 Sum_probs=190.4
Q ss_pred CCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCc-----ccCCCcCEEECcCCcCCCCCchhhhCCCCCCEE
Q 047576 127 CFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLR-----GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIEL 201 (602)
Q Consensus 127 ~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~-----~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 201 (602)
.+++|+.|++. ++.+.+..|..|+.+++|++|+|++|.|+ +.+++|++|+|++|.|++..+ .++|++|
T Consensus 32 ~~~~L~~L~Ls--~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLS--GNPLSQISAADLAPFTKLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECC--SSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEECTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEee--CCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcccccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 44578888887 67777777789999999999999999998 468999999999999986543 3899999
Q ss_pred EecCCCCCCCCcccccCcCCCceeecccccCCCC-cccccCCCCCcEEEccCCCCCCCCCCccC-CCCCCccccCCCCcC
Q 047576 202 DVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGL-PQEIGNLKNLMLLDVGNNDIIGPIPSTLG-LFSDLSYLDLSCNQF 279 (602)
Q Consensus 202 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~i-p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~L~~N~l 279 (602)
+|++|.+++..+. .+++|+.|+|++|.++++ |..++++++|+.|+|++|.+++.+|..+. .+++|+.|+|++|.|
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 9999999987664 468899999999999994 67889999999999999999998888876 799999999999999
Q ss_pred CCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCC-CccCCC
Q 047576 280 NSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLS-GRVPYS 358 (602)
Q Consensus 280 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-g~~p~~ 358 (602)
++..+ +..+++|+.|+|++|.|++. |..+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|+++ +.+|..
T Consensus 182 ~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~ 257 (487)
T 3oja_A 182 YDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (487)
T ss_dssp CEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHH
T ss_pred ccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHH
Confidence 97733 44699999999999999975 4459999999999999999995 7888999999999999999998 566544
Q ss_pred C
Q 047576 359 N 359 (602)
Q Consensus 359 ~ 359 (602)
+
T Consensus 258 ~ 258 (487)
T 3oja_A 258 F 258 (487)
T ss_dssp H
T ss_pred H
Confidence 3
No 306
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.93 E-value=6.4e-25 Score=237.10 Aligned_cols=193 Identities=26% Similarity=0.316 Sum_probs=87.2
Q ss_pred CCCCCCCCEEECcCCcCcc----cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceee
Q 047576 151 ISALSKLQLLDLSSNRLRG----RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILI 226 (602)
Q Consensus 151 l~~L~~L~~L~Ls~N~i~~----~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 226 (602)
++++++|++|+|++|++++ .+++|++|++++|++++. .++.+++|++|++++|+..+.+ .++.+++|++|+
T Consensus 102 ~~~l~~L~~L~L~~N~l~~l~~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 176 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTKLDVSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLD 176 (457)
T ss_dssp CTTCTTCCEEECCSSCCSCCCCTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEE
T ss_pred cCCCCcCCEEECCCCcCCeecCCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEE
Confidence 4444444444444444432 234444444444444442 1444444444444444333333 244444455555
Q ss_pred cccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCC
Q 047576 227 LAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGK 306 (602)
Q Consensus 227 L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 306 (602)
+++|+++++| ++.+++|+.|++++|++++. .++.+++|++|++++|++++ +| ++.+++|+.|++++|++++.
T Consensus 177 ls~n~l~~l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 177 CSFNKITELD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp CCSSCCCCCC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC
T ss_pred CCCCccceec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCc
Confidence 5555554444 44444555555555554443 24444455555555555544 23 44444555555555555443
Q ss_pred CCcccCCCC-------CCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccCCC
Q 047576 307 IPSQIASME-------DLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYS 358 (602)
Q Consensus 307 ~p~~~~~l~-------~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~ 358 (602)
.+..+..+. +|+.|++++|.+.|.+| ++.+++|+.|++++|+..|.+|..
T Consensus 249 ~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~ 305 (457)
T 3bz5_A 249 DVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQ 305 (457)
T ss_dssp CCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECT
T ss_pred CHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccC
Confidence 333333222 33334444444444333 234445555555555555555443
No 307
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.93 E-value=4.8e-25 Score=229.21 Aligned_cols=235 Identities=28% Similarity=0.418 Sum_probs=196.2
Q ss_pred CCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCc------ccCCCcC
Q 047576 102 GSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLR------GRLTNLN 175 (602)
Q Consensus 102 ~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~------~~l~~L~ 175 (602)
.++..++++...+.. ++ .+..+++|+.|++. ++....+|. +..+++|++|++++|... +.+++|+
T Consensus 88 ~~L~~L~L~~n~i~~---~~--~~~~l~~L~~L~l~---~n~i~~~~~-~~~l~~L~~L~l~~n~~~~~~~~~~~l~~L~ 158 (347)
T 4fmz_A 88 VKLTNLYIGTNKITD---IS--ALQNLTNLRELYLN---EDNISDISP-LANLTKMYSLNLGANHNLSDLSPLSNMTGLN 158 (347)
T ss_dssp TTCCEEECCSSCCCC---CG--GGTTCTTCSEEECT---TSCCCCCGG-GTTCTTCCEEECTTCTTCCCCGGGTTCTTCC
T ss_pred CcCCEEEccCCcccC---ch--HHcCCCcCCEEECc---CCcccCchh-hccCCceeEEECCCCCCcccccchhhCCCCc
Confidence 467788886554331 22 36667777777765 344445555 899999999999999544 3578999
Q ss_pred EEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcccccCCCCCcEEEccCCCC
Q 047576 176 YMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDI 255 (602)
Q Consensus 176 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l 255 (602)
+|++++|.+.+..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.+++++. +..+++|+.|++++|++
T Consensus 159 ~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l 233 (347)
T 4fmz_A 159 YLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKI 233 (347)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCC
T ss_pred EEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch-hhcCCcCCEEEccCCcc
Confidence 99999999987654 8999999999999999986443 8889999999999999999766 88899999999999999
Q ss_pred CCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCccc
Q 047576 256 IGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEI 335 (602)
Q Consensus 256 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 335 (602)
++..+ +..+++|++|++++|.+++. +.+..+++|++|++++|++++. ..+..+++|+.|++++|++++..|..+
T Consensus 234 ~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l 307 (347)
T 4fmz_A 234 TDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVI 307 (347)
T ss_dssp CCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHH
T ss_pred CCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHh
Confidence 87655 88999999999999999864 4688999999999999999864 468889999999999999999888999
Q ss_pred ccccccccccccCCcCCCccC
Q 047576 336 TKLSRLDYLNLSGNKLSGRVP 356 (602)
Q Consensus 336 ~~l~~L~~L~l~~N~l~g~~p 356 (602)
..+++|+.|++++|++++..|
T Consensus 308 ~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 308 GGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp HTCTTCSEEECCSSSCCCCGG
T ss_pred hccccCCEEEccCCccccccC
Confidence 999999999999999998877
No 308
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.93 E-value=1.5e-26 Score=241.43 Aligned_cols=216 Identities=25% Similarity=0.287 Sum_probs=187.3
Q ss_pred cCCccccCCccCCCCCCCCEEECcCCcCcc-------cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCC
Q 047576 140 YDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPI 212 (602)
Q Consensus 140 ~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 212 (602)
.++....+|..+. ++|++|+|++|+|++ .+++|++|+|++|++++..|..|+++++|++|+|++|++++..
T Consensus 39 ~~~~l~~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 116 (353)
T 2z80_A 39 SSGSLNSIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLS 116 (353)
T ss_dssp CSTTCSSCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCC
T ss_pred CCCCccccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCC
Confidence 4455667887665 599999999999873 4789999999999999999999999999999999999999766
Q ss_pred cccccCcCCCceeecccccCCCCcc--cccCCCCCcEEEccCC-CCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhC
Q 047576 213 PLTLSRLTSLKILILAQNQLSGLPQ--EIGNLKNLMLLDVGNN-DIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTR 289 (602)
Q Consensus 213 p~~l~~l~~L~~L~L~~N~l~~ip~--~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 289 (602)
+..++++++|++|++++|+++++|. .+.++++|++|++++| .+++..|..+..+++|++|++++|++++..|..+..
T Consensus 117 ~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~ 196 (353)
T 2z80_A 117 SSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKS 196 (353)
T ss_dssp HHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT
T ss_pred HhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhc
Confidence 6669999999999999999999886 7899999999999999 577777888999999999999999999999999999
Q ss_pred CCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCC-------------------------------Ccccccc
Q 047576 290 LTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSI-------------------------------PGEITKL 338 (602)
Q Consensus 290 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-------------------------------p~~~~~l 338 (602)
+++|++|++++|+++...+..+..+++|+.|++++|++++.. |..+..+
T Consensus 197 l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l 276 (353)
T 2z80_A 197 IQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQI 276 (353)
T ss_dssp CSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTC
T ss_pred cccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcc
Confidence 999999999999997544334556899999999999999753 3345677
Q ss_pred cccccccccCCcCCCccCCC
Q 047576 339 SRLDYLNLSGNKLSGRVPYS 358 (602)
Q Consensus 339 ~~L~~L~l~~N~l~g~~p~~ 358 (602)
++|+.|++++|+++ .+|..
T Consensus 277 ~~L~~L~Ls~N~l~-~i~~~ 295 (353)
T 2z80_A 277 SGLLELEFSRNQLK-SVPDG 295 (353)
T ss_dssp TTCCEEECCSSCCC-CCCTT
T ss_pred cCCCEEECCCCCCC-ccCHH
Confidence 88889999999888 45544
No 309
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=1.3e-26 Score=238.44 Aligned_cols=223 Identities=21% Similarity=0.249 Sum_probs=137.8
Q ss_pred CCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc--cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEE
Q 047576 125 FSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG--RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELD 202 (602)
Q Consensus 125 ~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 202 (602)
++.+++|+.|++. ++.+.+..| +..+++|++|+|++|+|++ ..++|++|++++|++++..+.. +++|++|+
T Consensus 54 ~~~l~~L~~L~Ls--~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~ 126 (317)
T 3o53_A 54 LAPFTKLELLNLS--SNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSR---GQGKKNIY 126 (317)
T ss_dssp HTTCTTCCEEECT--TSCCEEEEE--ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCSEEEECC---CSSCEEEE
T ss_pred hhCCCcCCEEECC--CCcCCcchh--hhhcCCCCEEECcCCccccccCCCCcCEEECCCCccCCcCccc---cCCCCEEE
Confidence 4555566666554 344444333 6666667777777766663 3566677777777666554432 45667777
Q ss_pred ecCCCCCCCCcccccCcCCCceeecccccCCCC-cccc-cCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCC
Q 047576 203 VGDNSLIGPIPLTLSRLTSLKILILAQNQLSGL-PQEI-GNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFN 280 (602)
Q Consensus 203 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~i-p~~~-~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 280 (602)
|++|++++..|..++.+++|++|+|++|+++++ |..+ ..+++|++|+|++|.+++. |. ...+++|++|+|++|+++
T Consensus 127 l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~ 204 (317)
T 3o53_A 127 LANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLA 204 (317)
T ss_dssp CCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCC
T ss_pred CCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCC
Confidence 777776666666666667777777777776663 3444 3566677777777766644 22 223666777777777766
Q ss_pred CCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCC-CCCCccccccccccccccc-CCcCCCccCCC
Q 047576 281 SSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIK-GSIPGEITKLSRLDYLNLS-GNKLSGRVPYS 358 (602)
Q Consensus 281 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~l~-~N~l~g~~p~~ 358 (602)
+..+ .+..+++|+.|+|++|+|+ .+|..+..+++|+.|++++|.++ +.+|..+..+++|+.|+++ .+.++|..|..
T Consensus 205 ~l~~-~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 205 FMGP-EFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp EECG-GGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred cchh-hhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhc
Confidence 4433 4666667777777777766 35666666667777777777766 5566666666666666666 33555555544
No 310
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.93 E-value=6.6e-25 Score=236.99 Aligned_cols=230 Identities=24% Similarity=0.275 Sum_probs=188.7
Q ss_pred CCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc----cCCCcCEE
Q 047576 102 GSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG----RLTNLNYM 177 (602)
Q Consensus 102 ~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~----~l~~L~~L 177 (602)
.+++.++++...+. + ++ .++.+++|+.|++. .+.+.+ +| ++.+++|++|+|++|+|++ .+++|++|
T Consensus 42 ~~L~~L~Ls~n~l~--~-~~--~l~~l~~L~~L~Ls--~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~~~~~l~~L~~L 111 (457)
T 3bz5_A 42 ATLTSLDCHNSSIT--D-MT--GIEKLTGLTKLICT--SNNITT-LD--LSQNTNLTYLACDSNKLTNLDVTPLTKLTYL 111 (457)
T ss_dssp TTCCEEECCSSCCC--C-CT--TGGGCTTCSEEECC--SSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEE
T ss_pred CCCCEEEccCCCcc--c-Ch--hhcccCCCCEEEcc--CCcCCe-Ec--cccCCCCCEEECcCCCCceeecCCCCcCCEE
Confidence 46788888765443 2 22 46777888888776 455555 44 8999999999999999884 58899999
Q ss_pred ECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCC-CcccccCCCCCcEEEccCCCCC
Q 047576 178 SLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSG-LPQEIGNLKNLMLLDVGNNDII 256 (602)
Q Consensus 178 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~ 256 (602)
+|++|++++. | ++.+++|++|++++|++++. + ++++++|++|++++|+..+ + .++.+++|+.|++++|+++
T Consensus 112 ~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~ 183 (457)
T 3bz5_A 112 NCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKIT 183 (457)
T ss_dssp ECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccc
Confidence 9999999975 3 88999999999999999874 3 8889999999999995554 6 4788899999999999999
Q ss_pred CCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccc
Q 047576 257 GPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEIT 336 (602)
Q Consensus 257 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 336 (602)
+ +| ++.+++|+.|++++|++++. .++.+++|+.|+|++|++++ +| +..+++|+.|++++|++++..+..+.
T Consensus 184 ~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~ 254 (457)
T 3bz5_A 184 E-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLS 254 (457)
T ss_dssp C-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCT
T ss_pred e-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCC
Confidence 7 45 78889999999999999875 38889999999999999997 56 88899999999999999987776666
Q ss_pred ccc-------ccccccccCCcCCCccCCC
Q 047576 337 KLS-------RLDYLNLSGNKLSGRVPYS 358 (602)
Q Consensus 337 ~l~-------~L~~L~l~~N~l~g~~p~~ 358 (602)
.+. +|+.|++++|++.|.+|..
T Consensus 255 ~L~~L~l~~n~L~~L~l~~n~~~~~~~~~ 283 (457)
T 3bz5_A 255 KLTTLHCIQTDLLEIDLTHNTQLIYFQAE 283 (457)
T ss_dssp TCCEEECTTCCCSCCCCTTCTTCCEEECT
T ss_pred CCCEEeccCCCCCEEECCCCccCCccccc
Confidence 665 5678888888888888743
No 311
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.93 E-value=1.2e-24 Score=226.09 Aligned_cols=241 Identities=24% Similarity=0.330 Sum_probs=201.9
Q ss_pred CCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-----cCCCcCE
Q 047576 102 GSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-----RLTNLNY 176 (602)
Q Consensus 102 ~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-----~l~~L~~ 176 (602)
.++..++++...+. .++. +..+++|+.|++. ++. ...+| .+.++++|++|+|++|++.+ .+++|++
T Consensus 66 ~~L~~L~l~~n~i~---~~~~--~~~l~~L~~L~L~--~n~-i~~~~-~~~~l~~L~~L~l~~n~i~~~~~~~~l~~L~~ 136 (347)
T 4fmz_A 66 TNLEYLNLNGNQIT---DISP--LSNLVKLTNLYIG--TNK-ITDIS-ALQNLTNLRELYLNEDNISDISPLANLTKMYS 136 (347)
T ss_dssp TTCCEEECCSSCCC---CCGG--GTTCTTCCEEECC--SSC-CCCCG-GGTTCTTCSEEECTTSCCCCCGGGTTCTTCCE
T ss_pred CCccEEEccCCccc---cchh--hhcCCcCCEEEcc--CCc-ccCch-HHcCCCcCCEEECcCCcccCchhhccCCceeE
Confidence 46788888765433 2222 6777788887775 344 44454 69999999999999999974 5899999
Q ss_pred EECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcccccCCCCCcEEEccCCCCC
Q 047576 177 MSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDII 256 (602)
Q Consensus 177 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~ 256 (602)
|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|++++++. +..+++|+.|++++|.++
T Consensus 137 L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~ 212 (347)
T 4fmz_A 137 LNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP-LASLTSLHYFTAYVNQIT 212 (347)
T ss_dssp EECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCC
T ss_pred EECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc-ccCCCccceeecccCCCC
Confidence 9999997665554 49999999999999999986544 8899999999999999999876 889999999999999999
Q ss_pred CCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccc
Q 047576 257 GPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEIT 336 (602)
Q Consensus 257 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 336 (602)
+..+ +..+++|++|++++|.+++..+ +..+++|++|++++|.+++. ..+..+++|+.|++++|++++. ..+.
T Consensus 213 ~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~ 284 (347)
T 4fmz_A 213 DITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLN 284 (347)
T ss_dssp CCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGG
T ss_pred CCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhc
Confidence 7655 7889999999999999986544 89999999999999999864 4689999999999999999975 4688
Q ss_pred cccccccccccCCcCCCccCCCCCcCC
Q 047576 337 KLSRLDYLNLSGNKLSGRVPYSNKHLS 363 (602)
Q Consensus 337 ~l~~L~~L~l~~N~l~g~~p~~~~~l~ 363 (602)
.+++|+.|++++|++++..|..+..+.
T Consensus 285 ~l~~L~~L~L~~n~l~~~~~~~l~~l~ 311 (347)
T 4fmz_A 285 NLSQLNSLFLNNNQLGNEDMEVIGGLT 311 (347)
T ss_dssp GCTTCSEEECCSSCCCGGGHHHHHTCT
T ss_pred CCCCCCEEECcCCcCCCcChhHhhccc
Confidence 999999999999999988876554333
No 312
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=4.4e-25 Score=222.17 Aligned_cols=201 Identities=25% Similarity=0.306 Sum_probs=178.5
Q ss_pred CCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-------cCCCcCEEECcCCcCCCCCchhhhCCCCCCEE
Q 047576 129 PNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIEL 201 (602)
Q Consensus 129 ~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 201 (602)
++++.|++. ++++.+..+..|+++++|++|+|++|++++ .+++|++|+|++|.+++..+..|.++++|++|
T Consensus 28 ~~l~~L~ls--~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (276)
T 2z62_A 28 FSTKNLDLS--FNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL 105 (276)
T ss_dssp TTCCEEECT--TCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEE
T ss_pred CCccEEECC--CCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEE
Confidence 467888776 566666666689999999999999999873 47899999999999999999999999999999
Q ss_pred EecCCCCCCCCcccccCcCCCceeecccccCCC--CcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCc----cccCC
Q 047576 202 DVGDNSLIGPIPLTLSRLTSLKILILAQNQLSG--LPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLS----YLDLS 275 (602)
Q Consensus 202 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~--ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~----~L~L~ 275 (602)
++++|++++..+..++++++|++|++++|++++ +|..++++++|+.|++++|++++..+..+..+++|+ .|+++
T Consensus 106 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls 185 (276)
T 2z62_A 106 VAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLS 185 (276)
T ss_dssp ECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECC
T ss_pred ECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecC
Confidence 999999998888789999999999999999998 689999999999999999999988888888777777 89999
Q ss_pred CCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCC
Q 047576 276 CNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIP 332 (602)
Q Consensus 276 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 332 (602)
+|.+++..+..+. ..+|+.|+|++|++++..+..+..+++|+.|++++|.+++..|
T Consensus 186 ~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 186 LNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp SSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred CCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 9999977665554 4589999999999998777778999999999999999997543
No 313
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=1.8e-25 Score=224.64 Aligned_cols=203 Identities=27% Similarity=0.311 Sum_probs=177.8
Q ss_pred CCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-----cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEE
Q 047576 128 FPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-----RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELD 202 (602)
Q Consensus 128 l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-----~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 202 (602)
+++|+.|.+. ++....++ .++.+++|++|+|++|++.+ .+++|++|+|++|.+++..+..|+++++|++|+
T Consensus 40 l~~L~~L~l~---~~~i~~~~-~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 115 (272)
T 3rfs_A 40 LNSIDQIIAN---NSDIKSVQ-GIQYLPNVRYLALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV 115 (272)
T ss_dssp HTTCCEEECT---TSCCCCCT-TGGGCTTCCEEECTTSCCCCCGGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccceeeeeeC---CCCccccc-ccccCCCCcEEECCCCCCCCchhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE
Confidence 4444555443 33333343 58889999999999999974 588999999999999999888999999999999
Q ss_pred ecCCCCCCCCcccccCcCCCceeecccccCCCCcc-cccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCC
Q 047576 203 VGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQ-EIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNS 281 (602)
Q Consensus 203 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 281 (602)
|++|++++..|..++++++|++|++++|+++++|. .++++++|+.|++++|++++..+..+..+++|++|++++|++++
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCc
Confidence 99999998888889999999999999999999765 56899999999999999998888889999999999999999999
Q ss_pred CCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCccccccccc
Q 047576 282 SIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRL 341 (602)
Q Consensus 282 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 341 (602)
..|..+..+++|+.|+|++|.+.+. +++|+.|+++.|+++|.+|..++.++..
T Consensus 196 ~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~~ 248 (272)
T 3rfs_A 196 VPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAPD 248 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCGG
T ss_pred cCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCCC
Confidence 8888899999999999999998865 4578999999999999999998877653
No 314
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.92 E-value=6.3e-25 Score=217.98 Aligned_cols=158 Identities=27% Similarity=0.289 Sum_probs=133.0
Q ss_pred CcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCc-ccccCCCCCcEEEcc
Q 047576 173 NLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLP-QEIGNLKNLMLLDVG 251 (602)
Q Consensus 173 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip-~~~~~l~~L~~L~L~ 251 (602)
+|++|+|++|.+++..+..|+++++|++|+|++|++++..|..|.++++|++|+|++|+++++| ..+.++++|++|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 4566666777777777888889999999999999998888888888999999999999998865 456888899999999
Q ss_pred CCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCC
Q 047576 252 NNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGS 330 (602)
Q Consensus 252 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 330 (602)
+|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..+..+++|+.|+|++|.+++.
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9998877777788888888888888888877777788888888888888888877777888888888888888888865
No 315
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.92 E-value=1.4e-24 Score=243.51 Aligned_cols=128 Identities=25% Similarity=0.325 Sum_probs=114.8
Q ss_pred CCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-------cCCCcCEEECcCCcCCCCCchhhhCCCCCCEE
Q 047576 129 PNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIEL 201 (602)
Q Consensus 129 ~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 201 (602)
++++.|++. +|++.+..|..|.++++|++|||++|+|++ .+++|++|+|++|+|++..+..|.++++|++|
T Consensus 52 ~~~~~LdLs--~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L 129 (635)
T 4g8a_A 52 FSTKNLDLS--FNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL 129 (635)
T ss_dssp TTCCEEECT--TSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEE
T ss_pred cCCCEEEee--CCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEE
Confidence 467888887 666666666789999999999999999973 48999999999999999988999999999999
Q ss_pred EecCCCCCCCCcccccCcCCCceeecccccCCC--CcccccCCCCCcEEEccCCCCCCC
Q 047576 202 DVGDNSLIGPIPLTLSRLTSLKILILAQNQLSG--LPQEIGNLKNLMLLDVGNNDIIGP 258 (602)
Q Consensus 202 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~--ip~~~~~l~~L~~L~L~~N~l~~~ 258 (602)
+|++|++++..+..|+++++|++|+|++|++++ +|..++++++|++|++++|++++.
T Consensus 130 ~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 188 (635)
T 4g8a_A 130 VAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 188 (635)
T ss_dssp ECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE
T ss_pred ECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccc
Confidence 999999998888889999999999999999987 578889999999999999987643
No 316
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.92 E-value=6.4e-26 Score=233.24 Aligned_cols=220 Identities=25% Similarity=0.280 Sum_probs=183.1
Q ss_pred CCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCc-----ccCCCcCEEECcCCcCCCCCchhhhCCCCCCE
Q 047576 126 SCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLR-----GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIE 200 (602)
Q Consensus 126 ~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~-----~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 200 (602)
..+++|+.|++. ++.+.+..|..|+++++|++|+|++|+++ +.+++|++|+|++|++++.. ..++|++
T Consensus 31 ~~~~~L~~L~L~--~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~ 103 (317)
T 3o53_A 31 QSAWNVKELDLS--GNPLSQISAADLAPFTKLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELL-----VGPSIET 103 (317)
T ss_dssp TTGGGCSEEECT--TSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEEETTCTTCCEEECCSSEEEEEE-----ECTTCCE
T ss_pred ccCCCCCEEECc--CCccCcCCHHHhhCCCcCCEEECCCCcCCcchhhhhcCCCCEEECcCCcccccc-----CCCCcCE
Confidence 345677777776 56667766778999999999999999997 45899999999999998543 3489999
Q ss_pred EEecCCCCCCCCcccccCcCCCceeecccccCCCC-cccccCCCCCcEEEccCCCCCCCCCCcc-CCCCCCccccCCCCc
Q 047576 201 LDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGL-PQEIGNLKNLMLLDVGNNDIIGPIPSTL-GLFSDLSYLDLSCNQ 278 (602)
Q Consensus 201 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~i-p~~~~~l~~L~~L~L~~N~l~~~~p~~l-~~l~~L~~L~L~~N~ 278 (602)
|++++|++++..+.. +++|++|++++|+++++ |..++.+++|++|++++|.+++..|..+ ..+++|++|+|++|.
T Consensus 104 L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~ 180 (317)
T 3o53_A 104 LHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (317)
T ss_dssp EECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCc
Confidence 999999998765543 67899999999999996 4578889999999999999998777766 478999999999999
Q ss_pred CCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCC-CccCC
Q 047576 279 FNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLS-GRVPY 357 (602)
Q Consensus 279 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-g~~p~ 357 (602)
+++. | ....+++|++|+|++|+|++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+++ +.+|.
T Consensus 181 l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~ 256 (317)
T 3o53_A 181 IYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (317)
T ss_dssp CCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHH
T ss_pred Cccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHH
Confidence 9866 3 33458899999999999996 4556889999999999999999 57888999999999999999998 55554
Q ss_pred CC
Q 047576 358 SN 359 (602)
Q Consensus 358 ~~ 359 (602)
.+
T Consensus 257 ~~ 258 (317)
T 3o53_A 257 FF 258 (317)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 317
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.92 E-value=1.6e-25 Score=247.57 Aligned_cols=184 Identities=21% Similarity=0.229 Sum_probs=152.2
Q ss_pred cccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-------cCCCcCEEECcCCcCCCCCchhh
Q 047576 120 LSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEI 192 (602)
Q Consensus 120 l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~~L~L~~N~l~~~~p~~~ 192 (602)
++.+.-+.+++|+.|++. ++++.+..|..|+++++|++|+|++|+|++ .+++|++|+|++|++++..|..|
T Consensus 17 l~~ip~~~~~~L~~L~Ls--~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 94 (549)
T 2z81_A 17 FTSIPSGLTAAMKSLDLS--FNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWF 94 (549)
T ss_dssp CSSCCSCCCTTCCEEECC--SSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHH
T ss_pred cccccccCCCCccEEECc--CCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHh
Confidence 444444555788999887 677777788899999999999999999973 47899999999999999999899
Q ss_pred hCCCCCCEEEecCCCCCC-CCcccccCcCCCceeecccccC-CCCc-ccccCCCCCcEEEccCCCCCCCCCCccCCCCCC
Q 047576 193 GNLKNLIELDVGDNSLIG-PIPLTLSRLTSLKILILAQNQL-SGLP-QEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDL 269 (602)
Q Consensus 193 ~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l-~~ip-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 269 (602)
+++++|++|+|++|++++ ..|..++++++|++|++++|++ +.+| ..+.++++|++|++++|++++.+|..++.+++|
T Consensus 95 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 174 (549)
T 2z81_A 95 GPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDI 174 (549)
T ss_dssp TTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEE
T ss_pred ccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccC
Confidence 999999999999999987 4678899999999999999994 4576 579999999999999999999999999887777
Q ss_pred ccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCC
Q 047576 270 SYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSG 305 (602)
Q Consensus 270 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 305 (602)
+.|++++|.++...+..+..+++|++|++++|++++
T Consensus 175 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 175 HHLTLHLSESAFLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp EEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTT
T ss_pred ceEecccCcccccchhhHhhcccccEEEccCCcccc
Confidence 777777777653222223456677777777776665
No 318
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.92 E-value=1.9e-24 Score=234.29 Aligned_cols=193 Identities=33% Similarity=0.485 Sum_probs=103.0
Q ss_pred CCCCCCCCEEECcCCcCcc-----cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCcee
Q 047576 151 ISALSKLQLLDLSSNRLRG-----RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKIL 225 (602)
Q Consensus 151 l~~L~~L~~L~Ls~N~i~~-----~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 225 (602)
++++++|++|++++|++.+ .+++|++|++++|.+++..| ++.+++|++|++++|++++. ..+..+++|+.|
T Consensus 173 ~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 248 (466)
T 1o6v_A 173 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDL 248 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEE
T ss_pred hccCCCCCEEECcCCcCCCChhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEE
Confidence 6666666666666666552 35566666666666655443 55555555555555555542 235555555555
Q ss_pred ecccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCC
Q 047576 226 ILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSG 305 (602)
Q Consensus 226 ~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 305 (602)
++++|++++++. +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..| +..+++|+.|+|++|++++
T Consensus 249 ~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~ 323 (466)
T 1o6v_A 249 DLANNQISNLAP-LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISD 323 (466)
T ss_dssp ECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSC
T ss_pred ECCCCccccchh-hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCC
Confidence 555555555443 4555555555555555554333 4455555555555555554322 4455555555555555554
Q ss_pred CCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccC
Q 047576 306 KIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVP 356 (602)
Q Consensus 306 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 356 (602)
..| +..+++|+.|++++|++++. ..+..+++|+.|++++|++++..|
T Consensus 324 ~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 324 ISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 370 (466)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG
T ss_pred chh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch
Confidence 433 44455555555555555543 234455555555555555555444
No 319
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.92 E-value=2.2e-24 Score=233.72 Aligned_cols=190 Identities=31% Similarity=0.500 Sum_probs=87.4
Q ss_pred CCCCCCCCEEECcCCcCcc-----cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCcee
Q 047576 151 ISALSKLQLLDLSSNRLRG-----RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKIL 225 (602)
Q Consensus 151 l~~L~~L~~L~Ls~N~i~~-----~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 225 (602)
+..+++|++|++++|++.+ .+++|++|++++|++++. +.+..+++|++|++++|.+++..| +..+++|+.|
T Consensus 195 l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 270 (466)
T 1o6v_A 195 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTEL 270 (466)
T ss_dssp GGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEE
T ss_pred hccCCCCCEEEecCCcccccccccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEE
Confidence 4444444444444444432 244444444444444432 234444444444444444443332 4444444444
Q ss_pred ecccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCC
Q 047576 226 ILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSG 305 (602)
Q Consensus 226 ~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 305 (602)
++++|+++++|. +..+++|+.|++++|++++..| +..+++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 271 ~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 271 KLGANQISNISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp ECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred ECCCCccCcccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCC
Confidence 444444444433 4444444444444444444322 3444444444444444444333 3444444444444444443
Q ss_pred CCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCC
Q 047576 306 KIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSG 353 (602)
Q Consensus 306 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 353 (602)
. ..+..+++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 346 ~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 346 V--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp C--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred c--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 2 234444444444444444444433 4444444444444444444
No 320
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=3.2e-24 Score=219.78 Aligned_cols=194 Identities=21% Similarity=0.267 Sum_probs=133.9
Q ss_pred CCCEEECcCCcCcc----------cCCCcCEEECcCCcCCCCCchhh--hCCCCCCEEEecCCCCCCCCc----ccccCc
Q 047576 156 KLQLLDLSSNRLRG----------RLTNLNYMSLSRNMLGGLLPQEI--GNLKNLIELDVGDNSLIGPIP----LTLSRL 219 (602)
Q Consensus 156 ~L~~L~Ls~N~i~~----------~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~l~~l 219 (602)
.++.|.+.++.+.. .+++|++|+|++|.+++..|..+ +.+++|++|+|++|++++..| ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 46677777776652 14567777777777777777776 777777777777777776555 334567
Q ss_pred CCCceeecccccCCCC-cccccCCCCCcEEEccCCCCCCC--C--CCccCCCCCCccccCCCCcCCCCCch----hhhCC
Q 047576 220 TSLKILILAQNQLSGL-PQEIGNLKNLMLLDVGNNDIIGP--I--PSTLGLFSDLSYLDLSCNQFNSSIPN----ELTRL 290 (602)
Q Consensus 220 ~~L~~L~L~~N~l~~i-p~~~~~l~~L~~L~L~~N~l~~~--~--p~~l~~l~~L~~L~L~~N~l~~~~p~----~~~~l 290 (602)
++|++|+|++|+++++ |..++++++|++|+|++|++.+. + +..+..+++|++|+|++|+++. +|. .++.+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 7777777777777774 45677777777777777776642 2 2234567777777777777763 222 24667
Q ss_pred CCCCEEeccCCCCCCCCCcccCCC---CCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCC
Q 047576 291 TQLFHLDLSSNKLSGKIPSQIASM---EDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSG 353 (602)
Q Consensus 291 ~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 353 (602)
++|++|+|++|+|++..|..+..+ ++|++|+|++|+++ .+|..+. ++|+.|++++|++++
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNR 286 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCS
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCC
Confidence 777777777777777666666655 57777777777777 5566553 677777777777776
No 321
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.91 E-value=2.4e-24 Score=240.09 Aligned_cols=244 Identities=25% Similarity=0.270 Sum_probs=137.5
Q ss_pred CCCCCCCCCceeC-------CCCCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCE
Q 047576 87 DSDHCEWIGITCN-------SAGSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQL 159 (602)
Q Consensus 87 ~~~~C~w~gv~C~-------~~~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~ 159 (602)
+.+||.|.|..|. ....++.++++..++. .+ .-...++|+.|++. ++ ....+|. .+++|++
T Consensus 18 ~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~---~l---p~~l~~~L~~L~L~--~N-~l~~lp~---~l~~L~~ 85 (622)
T 3g06_A 18 AAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT---TL---PDCLPAHITTLVIP--DN-NLTSLPA---LPPELRT 85 (622)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS---CC---CSCCCTTCSEEEEC--SC-CCSCCCC---CCTTCCE
T ss_pred cCCcchhccccccCcccccccCCCCcEEEecCCCcC---cc---ChhhCCCCcEEEec--CC-CCCCCCC---cCCCCCE
Confidence 4578999764331 1134677788655443 22 11222445555443 22 2234444 3455555
Q ss_pred EECcCCcCcc---cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCc
Q 047576 160 LDLSSNRLRG---RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLP 236 (602)
Q Consensus 160 L~Ls~N~i~~---~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip 236 (602)
|+|++|+|++ .+++|++|+|++|.|++..+ .+++|+.|+|++|+|++ +|.. +++|++|+|++|+++++|
T Consensus 86 L~Ls~N~l~~lp~~l~~L~~L~Ls~N~l~~l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l~ 157 (622)
T 3g06_A 86 LEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASLP 157 (622)
T ss_dssp EEECSCCCSCCCCCCTTCCEEEECSCCCCCCCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCC
T ss_pred EEcCCCcCCcCCCCCCCCCEEECcCCcCCCCCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCcC
Confidence 5555555542 34455555555555554221 23334444444444332 2221 133333333333333322
Q ss_pred ccc-----------------cCCCCCcEEEccCCCCCCCCCCccC-----------------CCCCCccccCCCCcCCCC
Q 047576 237 QEI-----------------GNLKNLMLLDVGNNDIIGPIPSTLG-----------------LFSDLSYLDLSCNQFNSS 282 (602)
Q Consensus 237 ~~~-----------------~~l~~L~~L~L~~N~l~~~~p~~l~-----------------~l~~L~~L~L~~N~l~~~ 282 (602)
..+ ..+++|+.|++++|++++ +|..+. .+++|++|+|++|+|++
T Consensus 158 ~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~~- 235 (622)
T 3g06_A 158 ALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTS- 235 (622)
T ss_dssp CCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSC-
T ss_pred CccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCCccchhhEEECcCCcccccCCCCCCCCEEEccCCccCc-
Confidence 211 112455555555555553 221111 12678888888888875
Q ss_pred CchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccCCCCC
Q 047576 283 IPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYSNK 360 (602)
Q Consensus 283 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~ 360 (602)
+| ..+++|+.|+|++|+|+. +|. .+++|+.|+|++|+|+ .+|..+..+++|+.|++++|+++|.+|..+.
T Consensus 236 lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 236 LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHH
T ss_pred CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHH
Confidence 44 456788888999988884 555 5688999999999998 7788899999999999999999988876543
No 322
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=6.9e-24 Score=210.49 Aligned_cols=181 Identities=25% Similarity=0.298 Sum_probs=162.9
Q ss_pred CcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCC-cccccCCCCCcEEEcc
Q 047576 173 NLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGL-PQEIGNLKNLMLLDVG 251 (602)
Q Consensus 173 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~i-p~~~~~l~~L~~L~L~ 251 (602)
+.++++++++.++ .+|..+. ++|+.|+|++|++++..|..|.++++|++|+|++|+++++ |..+.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3456777777777 4455444 6899999999999999999999999999999999999995 4568999999999999
Q ss_pred CCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCC
Q 047576 252 NNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSI 331 (602)
Q Consensus 252 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 331 (602)
+|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..+..+++|+.|+|++|++++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 99999888889999999999999999999888878899999999999999999887778999999999999999999888
Q ss_pred CcccccccccccccccCCcCCCccC
Q 047576 332 PGEITKLSRLDYLNLSGNKLSGRVP 356 (602)
Q Consensus 332 p~~~~~l~~L~~L~l~~N~l~g~~p 356 (602)
+..+..+++|+.|++++|++++...
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBCTTST
T ss_pred HHHHhCCCCCCEEEeeCCceeCCcc
Confidence 8899999999999999999988643
No 323
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.91 E-value=3.3e-24 Score=219.55 Aligned_cols=189 Identities=28% Similarity=0.422 Sum_probs=144.0
Q ss_pred CCCCCCCEEECcCCcCcc-----cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceee
Q 047576 152 SALSKLQLLDLSSNRLRG-----RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILI 226 (602)
Q Consensus 152 ~~L~~L~~L~Ls~N~i~~-----~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 226 (602)
..+++|++|++++|.+.. .+++|++|+|++|.+++..+ +..+++|++|+|++|++++. | .+..+++|++|+
T Consensus 38 ~~l~~L~~L~l~~~~i~~l~~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~ 113 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLD 113 (308)
T ss_dssp HHHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEE
T ss_pred HHcCCcCEEEeeCCCccCchhhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEE
Confidence 356677777777777662 46778888888888876544 78888888888888887753 3 577888888888
Q ss_pred cccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCC
Q 047576 227 LAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGK 306 (602)
Q Consensus 227 L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 306 (602)
+++|+++++|. +..+++|+.|++++|++++..+ +..+++|++|++++|.+++..+ +..+++|+.|+|++|++++.
T Consensus 114 l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~ 188 (308)
T 1h6u_A 114 LTSTQITDVTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDI 188 (308)
T ss_dssp CTTSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCCCchh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcC
Confidence 88888888765 7788888888888888876544 7778888888888888875433 77888888888888888764
Q ss_pred CCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCC
Q 047576 307 IPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSG 353 (602)
Q Consensus 307 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 353 (602)
.+ +..+++|+.|+|++|++++..+ +..+++|+.|++++|++++
T Consensus 189 ~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 189 SP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp GG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred hh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 43 7778888888888888886543 7778888888888888876
No 324
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=1.8e-24 Score=212.92 Aligned_cols=189 Identities=21% Similarity=0.232 Sum_probs=146.8
Q ss_pred CCCEEECcCCcCcc-------cCCCcCEEECcCCc-CCCCCchhhhCCCCCCEEEecC-CCCCCCCcccccCcCCCceee
Q 047576 156 KLQLLDLSSNRLRG-------RLTNLNYMSLSRNM-LGGLLPQEIGNLKNLIELDVGD-NSLIGPIPLTLSRLTSLKILI 226 (602)
Q Consensus 156 ~L~~L~Ls~N~i~~-------~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~ 226 (602)
+|++|+|++|+|++ .+++|++|+|++|. +++..+..|.++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 67777777777762 36677777777776 7777777888888888888888 888877777888888888888
Q ss_pred cccccCCCCcccccCCCCCc---EEEccCC-CCCCCCCCccCCCCCCc-cccCCCCcCCCCCchhhhCCCCCCEEeccCC
Q 047576 227 LAQNQLSGLPQEIGNLKNLM---LLDVGNN-DIIGPIPSTLGLFSDLS-YLDLSCNQFNSSIPNELTRLTQLFHLDLSSN 301 (602)
Q Consensus 227 L~~N~l~~ip~~~~~l~~L~---~L~L~~N-~l~~~~p~~l~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 301 (602)
+++|+++++|. +..+++|+ +|++++| ++++..+..|..+++|+ +|++++|+++...+..+.. ++|+.|+|++|
T Consensus 112 l~~n~l~~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n 189 (239)
T 2xwt_C 112 IFNTGLKMFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKN 189 (239)
T ss_dssp EEEECCCSCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTC
T ss_pred CCCCCCccccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCC
Confidence 88888888886 77777887 8888888 88877777788888888 8888888888433334444 78888888888
Q ss_pred C-CCCCCCcccCCC-CCCCEEeCCCCCCCCCCCcccccccccccccccCC
Q 047576 302 K-LSGKIPSQIASM-EDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGN 349 (602)
Q Consensus 302 ~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 349 (602)
+ +++..+..|..+ ++|+.|++++|++++..+. .+++|+.|+++++
T Consensus 190 ~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 190 KYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp TTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 5 886666778888 8888888888888854333 5667777777765
No 325
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.91 E-value=1.7e-23 Score=225.80 Aligned_cols=212 Identities=30% Similarity=0.425 Sum_probs=140.4
Q ss_pred CCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc---cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecC
Q 047576 129 PNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG---RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGD 205 (602)
Q Consensus 129 ~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~---~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 205 (602)
++|+.|++. ++.+. .+| +++++++|++|++++|++++ ...+|++|++++|++++ +| .++++++|++|++++
T Consensus 131 ~~L~~L~L~--~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~lp~~~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~ 204 (454)
T 1jl5_A 131 PLLEYLGVS--NNQLE-KLP-ELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADN 204 (454)
T ss_dssp TTCCEEECC--SSCCS-SCC-CCTTCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCS
T ss_pred CCCCEEECc--CCCCC-CCc-ccCCCCCCCEEECCCCcCcccCCCcccccEEECcCCcCCc-Cc-cccCCCCCCEEECCC
Confidence 466666665 44444 478 69999999999999999875 35688999999999887 45 588888888888888
Q ss_pred CCCCCCCcc-------------------cccCcCCCceeecccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCC
Q 047576 206 NSLIGPIPL-------------------TLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLF 266 (602)
Q Consensus 206 N~l~~~~p~-------------------~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 266 (602)
|++++ +|. .++.+++|++|++++|+++++|.. +++|+.|++++|++++ +|.. +
T Consensus 205 N~l~~-l~~~~~~L~~L~l~~n~l~~lp~~~~l~~L~~L~l~~N~l~~l~~~---~~~L~~L~l~~N~l~~-l~~~---~ 276 (454)
T 1jl5_A 205 NSLKK-LPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKTLPDL---PPSLEALNVRDNYLTD-LPEL---P 276 (454)
T ss_dssp SCCSS-CCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSSCCSC---CTTCCEEECCSSCCSC-CCCC---C
T ss_pred CcCCc-CCCCcCcccEEECcCCcCCcccccCCCCCCCEEECCCCcCCccccc---ccccCEEECCCCcccc-cCcc---c
Confidence 87775 332 234444445555555544444432 1344444444444443 2322 2
Q ss_pred CCCccccCCCCcCCC--CCchhhh-------------CC-CCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCC
Q 047576 267 SDLSYLDLSCNQFNS--SIPNELT-------------RL-TQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGS 330 (602)
Q Consensus 267 ~~L~~L~L~~N~l~~--~~p~~~~-------------~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 330 (602)
++|++|++++|.+++ .+|..+. .+ ++|+.|++++|++++ +|.. +++|+.|++++|++++
T Consensus 277 ~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~- 351 (454)
T 1jl5_A 277 QSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE- 351 (454)
T ss_dssp TTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-
T ss_pred CcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-
Confidence 567777777777776 3333222 22 478888888888886 5543 5788888888888884
Q ss_pred CCcccccccccccccccCCcCCC--ccCCCCCcC
Q 047576 331 IPGEITKLSRLDYLNLSGNKLSG--RVPYSNKHL 362 (602)
Q Consensus 331 ~p~~~~~l~~L~~L~l~~N~l~g--~~p~~~~~l 362 (602)
+|. .+++|+.|++++|+++| .+|..+..+
T Consensus 352 lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L 382 (454)
T 1jl5_A 352 VPE---LPQNLKQLHVEYNPLREFPDIPESVEDL 382 (454)
T ss_dssp CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE
T ss_pred ccc---hhhhccEEECCCCCCCcCCCChHHHHhh
Confidence 555 46788888888888888 777766443
No 326
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=1.3e-24 Score=222.81 Aligned_cols=195 Identities=22% Similarity=0.191 Sum_probs=162.4
Q ss_pred CCCCCCEEECcCCcCc---------ccCCCcCEEECcCCcCCCCCc----hhhhCCCCCCEEEecCCCCCCCCcccccCc
Q 047576 153 ALSKLQLLDLSSNRLR---------GRLTNLNYMSLSRNMLGGLLP----QEIGNLKNLIELDVGDNSLIGPIPLTLSRL 219 (602)
Q Consensus 153 ~L~~L~~L~Ls~N~i~---------~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 219 (602)
.+++|++|+|++|++. +.+++|++|+|++|.+++..+ ..+..+++|++|+|++|++++..|..++++
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 3567999999999887 336789999999999998665 455678999999999999998888899999
Q ss_pred CCCceeecccccCCC---Ccc--cccCCCCCcEEEccCCCCCCCCCC----ccCCCCCCccccCCCCcCCCCCchhhhCC
Q 047576 220 TSLKILILAQNQLSG---LPQ--EIGNLKNLMLLDVGNNDIIGPIPS----TLGLFSDLSYLDLSCNQFNSSIPNELTRL 290 (602)
Q Consensus 220 ~~L~~L~L~~N~l~~---ip~--~~~~l~~L~~L~L~~N~l~~~~p~----~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 290 (602)
++|++|+|++|++.+ ++. .++++++|++|+|++|+++. +|. .++.+++|++|+|++|++++..|..+..+
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 999999999999876 433 34688999999999999973 232 24678999999999999998888777777
Q ss_pred ---CCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCC
Q 047576 291 ---TQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSG 353 (602)
Q Consensus 291 ---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 353 (602)
++|++|+|++|+|+ .+|..+. ++|+.|+|++|++++. |. +..+++|+.|++++|+++.
T Consensus 248 ~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred cCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 69999999999999 6777664 7999999999999964 33 6788999999999999875
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=2e-23 Score=211.87 Aligned_cols=196 Identities=26% Similarity=0.275 Sum_probs=167.4
Q ss_pred CCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc-------cCCCcCEEECcCCcCCCCCchhhhCCCCC
Q 047576 126 SCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG-------RLTNLNYMSLSRNMLGGLLPQEIGNLKNL 198 (602)
Q Consensus 126 ~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 198 (602)
+.+++++.++.. ++-...+|..+. ++|++|+|++|+|++ .+++|++|+|++|.|++..+. +.+++|
T Consensus 7 ~~l~~l~~l~~~---~~~l~~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 7 SKVASHLEVNCD---KRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp ECSTTCCEEECT---TSCCSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred cccCCccEEECC---CCCCCcCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 444555555443 344456777664 689999999999873 478999999999999876443 889999
Q ss_pred CEEEecCCCCCCCCcccccCcCCCceeecccccCCCCc-ccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCC
Q 047576 199 IELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLP-QEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCN 277 (602)
Q Consensus 199 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 277 (602)
++|+|++|+++ .+|..+.++++|++|+|++|+++++| ..|.++++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 99999999998 67888999999999999999999976 57899999999999999999888888899999999999999
Q ss_pred cCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCC
Q 047576 278 QFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGS 330 (602)
Q Consensus 278 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 330 (602)
+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+...
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 999877777889999999999999999 6788888889999999999999753
No 328
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.91 E-value=7.6e-24 Score=228.49 Aligned_cols=225 Identities=23% Similarity=0.277 Sum_probs=150.7
Q ss_pred CCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCC-------------CEEECcCCcCc
Q 047576 102 GSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKL-------------QLLDLSSNRLR 168 (602)
Q Consensus 102 ~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L-------------~~L~Ls~N~i~ 168 (602)
.++..+.++..++ |.++. .++.+++|+.|++. .+.+.|.+|..++++++| ++|++++|+++
T Consensus 11 ~~L~~L~l~~n~l---~~iP~-~i~~L~~L~~L~l~--~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~ 84 (454)
T 1jl5_A 11 TFLQEPLRHSSNL---TEMPV-EAENVKSKTEYYNA--WSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS 84 (454)
T ss_dssp ---------------------------CCHHHHHHH--HHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCS
T ss_pred ccchhhhcccCch---hhCCh-hHhcccchhhhhcc--CCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccc
Confidence 3456666655433 56654 47888888888887 677889999999998875 99999999988
Q ss_pred c---cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcccccCCCCC
Q 047576 169 G---RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKNL 245 (602)
Q Consensus 169 ~---~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L 245 (602)
+ ..++|++|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|+++++| .++++++|
T Consensus 85 ~lp~~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~lp-~~~~l~~L 155 (454)
T 1jl5_A 85 SLPELPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEKLP-ELQNSSFL 155 (454)
T ss_dssp CCCSCCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSSCC-CCTTCTTC
T ss_pred cCCCCcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCCCc-ccCCCCCC
Confidence 6 35789999999999987 5543 3778888888888775 2321 167888888888888877 47778888
Q ss_pred cEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCC
Q 047576 246 MLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNN 325 (602)
Q Consensus 246 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 325 (602)
++|++++|++++ +|..+ ++|++|++++|++++ +| .++++++|++|++++|++++ +|... ++|+.|++++|
T Consensus 156 ~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n 225 (454)
T 1jl5_A 156 KIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNN 225 (454)
T ss_dssp CEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSS
T ss_pred CEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCC
Confidence 888888888775 55433 477788888888776 45 57777778888888887775 44322 46777777777
Q ss_pred CCCCCCCcccccccccccccccCCcCCC
Q 047576 326 NIKGSIPGEITKLSRLDYLNLSGNKLSG 353 (602)
Q Consensus 326 ~l~~~~p~~~~~l~~L~~L~l~~N~l~g 353 (602)
+++ .+| .+..+++|+.|++++|++++
T Consensus 226 ~l~-~lp-~~~~l~~L~~L~l~~N~l~~ 251 (454)
T 1jl5_A 226 ILE-ELP-ELQNLPFLTTIYADNNLLKT 251 (454)
T ss_dssp CCS-SCC-CCTTCTTCCEEECCSSCCSS
T ss_pred cCC-ccc-ccCCCCCCCEEECCCCcCCc
Confidence 777 555 36777777777777777765
No 329
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=5.4e-23 Score=206.32 Aligned_cols=184 Identities=29% Similarity=0.335 Sum_probs=162.6
Q ss_pred cCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCccc-ccCCCCCcEEEccC
Q 047576 174 LNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQE-IGNLKNLMLLDVGN 252 (602)
Q Consensus 174 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~~-~~~l~~L~~L~L~~ 252 (602)
.+++++++|.++. +|..+. ++|++|+|++|++++..+..|.++++|++|++++|+++++|.. +.++++|++|++++
T Consensus 18 ~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 3456666666663 455443 6899999999999988888999999999999999999998765 58899999999999
Q ss_pred CCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCC
Q 047576 253 NDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIP 332 (602)
Q Consensus 253 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 332 (602)
|++++..+..|..+++|++|++++|++++..+..|..+++|++|+|++|+|++..+..+..+++|+.|+|++|++++..+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 174 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeCh
Confidence 99998888889999999999999999999888889999999999999999998777779999999999999999998888
Q ss_pred cccccccccccccccCCcCCCccCCCCC
Q 047576 333 GEITKLSRLDYLNLSGNKLSGRVPYSNK 360 (602)
Q Consensus 333 ~~~~~l~~L~~L~l~~N~l~g~~p~~~~ 360 (602)
..+..+++|+.|++++|++++..+..+.
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 202 (270)
T 2o6q_A 175 GAFDKLTELKTLKLDNNQLKRVPEGAFD 202 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred hHhccCCCcCEEECCCCcCCcCCHHHhc
Confidence 8899999999999999999976554443
No 330
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=8e-26 Score=238.96 Aligned_cols=230 Identities=21% Similarity=0.257 Sum_probs=190.0
Q ss_pred CCCCCCCccchhccccCCcccc----CCccCCCCCCCCEEECcCCcCc-----------------ccCCCcCEEECcCCc
Q 047576 125 FSCFPNLESLRILAYYDGFTGS----IPSEISALSKLQLLDLSSNRLR-----------------GRLTNLNYMSLSRNM 183 (602)
Q Consensus 125 ~~~l~~L~~L~l~~~~~~~~~~----ip~~l~~L~~L~~L~Ls~N~i~-----------------~~l~~L~~L~L~~N~ 183 (602)
+..+++|+.|++. ++.+.+. ++..+..+++|++|+|++|.+. ..+++|++|+|++|.
T Consensus 28 l~~~~~L~~L~L~--~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 105 (386)
T 2ca6_A 28 LLEDDSVKEIVLS--GNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA 105 (386)
T ss_dssp HHHCSCCCEEECT--TSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred HhcCCCccEEECC--CCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCc
Confidence 3445667777776 4555544 4456889999999999997543 357899999999999
Q ss_pred CCC----CCchhhhCCCCCCEEEecCCCCCCCCccccc----Cc---------CCCceeecccccCCC--Cc---ccccC
Q 047576 184 LGG----LLPQEIGNLKNLIELDVGDNSLIGPIPLTLS----RL---------TSLKILILAQNQLSG--LP---QEIGN 241 (602)
Q Consensus 184 l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~----~l---------~~L~~L~L~~N~l~~--ip---~~~~~ 241 (602)
+++ .+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++. +| ..+..
T Consensus 106 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~ 185 (386)
T 2ca6_A 106 FGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 185 (386)
T ss_dssp CCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHh
Confidence 998 5788999999999999999999755444443 34 899999999999983 66 56788
Q ss_pred CCCCcEEEccCCCCC--C---CCCCccCCCCCCccccCCCCcCC----CCCchhhhCCCCCCEEeccCCCCCCC----CC
Q 047576 242 LKNLMLLDVGNNDII--G---PIPSTLGLFSDLSYLDLSCNQFN----SSIPNELTRLTQLFHLDLSSNKLSGK----IP 308 (602)
Q Consensus 242 l~~L~~L~L~~N~l~--~---~~p~~l~~l~~L~~L~L~~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p 308 (602)
+++|+.|+|++|+++ | .+|..+..+++|+.|+|++|.++ +.+|..+..+++|++|+|++|+|++. +|
T Consensus 186 ~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~ 265 (386)
T 2ca6_A 186 HRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVV 265 (386)
T ss_dssp CTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHH
T ss_pred CCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHH
Confidence 999999999999998 3 45557889999999999999997 66788899999999999999999876 55
Q ss_pred ccc--CCCCCCCEEeCCCCCCCC----CCCccc-ccccccccccccCCcCCCccC
Q 047576 309 SQI--ASMEDLTWLDLSNNNIKG----SIPGEI-TKLSRLDYLNLSGNKLSGRVP 356 (602)
Q Consensus 309 ~~~--~~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~L~l~~N~l~g~~p 356 (602)
..+ +.+++|+.|+|++|.+++ .+|..+ .++++|+.|++++|++++..|
T Consensus 266 ~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 266 DAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 666 448999999999999997 477777 668999999999999998765
No 331
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=1.8e-25 Score=231.25 Aligned_cols=257 Identities=16% Similarity=0.185 Sum_probs=205.3
Q ss_pred CCCCCCCceeCCCCCEEEEEecCCCCCCCcccccCCCCCC--CCCccchhccccCCccccCCccCCCCCCCCEEECcCCc
Q 047576 89 DHCEWIGITCNSAGSIIGLHLSKDNVNFNGRLSHLNFSCF--PNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNR 166 (602)
Q Consensus 89 ~~C~w~gv~C~~~~~v~~l~l~~~~~~~~~~l~~~~~~~l--~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~ 166 (602)
-|..|.++.|++ ..++.++++...+. .-.+..+ ++++.|++. .+.+.+. ++.+.++++|++|+|++|.
T Consensus 35 vc~~W~~~~~~~-~~~~~l~l~~~~~~------~~~~~~~~~~~l~~L~l~--~n~l~~~-~~~~~~~~~L~~L~L~~~~ 104 (336)
T 2ast_B 35 VCKRWYRLASDE-SLWQTLDLTGKNLH------PDVTGRLLSQGVIAFRCP--RSFMDQP-LAEHFSPFRVQHMDLSNSV 104 (336)
T ss_dssp SCHHHHHHHTCS-TTSSEEECTTCBCC------HHHHHHHHHTTCSEEECT--TCEECSC-CCSCCCCBCCCEEECTTCE
T ss_pred HHHHHHHHhcCc-hhheeeccccccCC------HHHHHhhhhccceEEEcC--Ccccccc-chhhccCCCCCEEEccCCC
Confidence 344799988863 45677888654322 2223444 667777765 4444444 4457789999999999999
Q ss_pred Ccc--------cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCC-CCCCC-CcccccCcCCCceeecccc-cCCC-
Q 047576 167 LRG--------RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDN-SLIGP-IPLTLSRLTSLKILILAQN-QLSG- 234 (602)
Q Consensus 167 i~~--------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~~L~~L~L~~N-~l~~- 234 (602)
+.+ .+++|++|+|++|.+++..+..++.+++|++|+|++| .+++. +|..+.++++|++|++++| .+++
T Consensus 105 l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~ 184 (336)
T 2ast_B 105 IEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK 184 (336)
T ss_dssp ECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH
T ss_pred cCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH
Confidence 873 4899999999999999999999999999999999999 67763 6777889999999999999 9997
Q ss_pred -CcccccCCC-CCcEEEccCC--CCC-CCCCCccCCCCCCccccCCCCc-CCCCCchhhhCCCCCCEEeccCCC-CCCCC
Q 047576 235 -LPQEIGNLK-NLMLLDVGNN--DII-GPIPSTLGLFSDLSYLDLSCNQ-FNSSIPNELTRLTQLFHLDLSSNK-LSGKI 307 (602)
Q Consensus 235 -ip~~~~~l~-~L~~L~L~~N--~l~-~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~ 307 (602)
++..+..++ +|++|++++| .++ +.+|..+..+++|++|++++|. +++..+..+..+++|++|+|++|. +....
T Consensus 185 ~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~ 264 (336)
T 2ast_B 185 HVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPET 264 (336)
T ss_dssp HHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGG
T ss_pred HHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHH
Confidence 788889999 9999999999 566 4567778889999999999999 787888899999999999999996 33222
Q ss_pred CcccCCCCCCCEEeCCCCCCCCCCCccccccc-ccccccccCCcCCCccCCCC
Q 047576 308 PSQIASMEDLTWLDLSNNNIKGSIPGEITKLS-RLDYLNLSGNKLSGRVPYSN 359 (602)
Q Consensus 308 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~g~~p~~~ 359 (602)
...++.+++|+.|++++| ++. ..+..+. .|..|++++|+++|..|...
T Consensus 265 ~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 265 LLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTI 313 (336)
T ss_dssp GGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSC
T ss_pred HHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCcc
Confidence 236888999999999999 443 2444443 47888899999999998765
No 332
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=2.6e-23 Score=212.88 Aligned_cols=188 Identities=26% Similarity=0.405 Sum_probs=158.7
Q ss_pred CCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCc-----ccCCCcCEEECcCCcCCCCCchhhhCCCCCCEEE
Q 047576 128 FPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLR-----GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELD 202 (602)
Q Consensus 128 l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~-----~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 202 (602)
+++|+.|++. ++....+| .+..+++|++|+|++|++. +.+++|++|+|++|++++. +.+..+++|++|+
T Consensus 40 l~~L~~L~l~---~~~i~~l~-~~~~l~~L~~L~L~~n~i~~~~~~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAF---GTGVTTIE-GVQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNV--SAIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECT---TSCCCCCT-TGGGCTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEE
T ss_pred cCCcCEEEee---CCCccCch-hhhccCCCCEEEccCCcCCCChhHccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEE
Confidence 4445555543 23333455 5888999999999999987 3578999999999999875 4799999999999
Q ss_pred ecCCCCCCCCcccccCcCCCceeecccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCC
Q 047576 203 VGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSS 282 (602)
Q Consensus 203 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 282 (602)
|++|++++. |. +..+++|++|++++|++++++. ++.+++|+.|++++|++++..+ +..+++|+.|++++|.+++.
T Consensus 114 l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~ 188 (308)
T 1h6u_A 114 LTSTQITDV-TP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDI 188 (308)
T ss_dssp CTTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcC
Confidence 999999874 43 8999999999999999999876 8899999999999999997544 88999999999999999865
Q ss_pred CchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCC
Q 047576 283 IPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGS 330 (602)
Q Consensus 283 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 330 (602)
.+ +..+++|++|+|++|++++.. .+..+++|+.|++++|++++.
T Consensus 189 ~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 189 SP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp GG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEECC
T ss_pred hh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeecC
Confidence 44 889999999999999999755 389999999999999999863
No 333
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.89 E-value=6.9e-24 Score=233.64 Aligned_cols=201 Identities=24% Similarity=0.374 Sum_probs=156.0
Q ss_pred CCCCC-----CCCCc-eeCCCCCEEEEEecCCCCCCCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEE
Q 047576 87 DSDHC-----EWIGI-TCNSAGSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLL 160 (602)
Q Consensus 87 ~~~~C-----~w~gv-~C~~~~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L 160 (602)
+.++| .|.|+ .|.. ++++.|+++ ++++.+ +|..+. ++|++|
T Consensus 39 ~~~~~~~~~~~~~~l~~C~~-~~L~~L~Ls-----------------------------~n~L~~-lp~~l~--~~L~~L 85 (571)
T 3cvr_A 39 QALPGENRNEAVSLLKECLI-NQFSELQLN-----------------------------RLNLSS-LPDNLP--PQITVL 85 (571)
T ss_dssp TCCTTCCHHHHHHHHHHHHH-TTCSEEECC-----------------------------SSCCSC-CCSCCC--TTCSEE
T ss_pred cCCccccccchhhhcccccc-CCccEEEeC-----------------------------CCCCCc-cCHhHc--CCCCEE
Confidence 35677 69999 7863 467777774 233333 666553 789999
Q ss_pred ECcCCcCcc---cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcc
Q 047576 161 DLSSNRLRG---RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQ 237 (602)
Q Consensus 161 ~Ls~N~i~~---~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~ 237 (602)
+|++|+|+. .+++|++|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|++|+|+++|.
T Consensus 86 ~Ls~N~l~~ip~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~ 157 (571)
T 3cvr_A 86 EITQNALISLPELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTMLPE 157 (571)
T ss_dssp ECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC
T ss_pred ECcCCCCcccccccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCcCCC
Confidence 999998873 46788899999999887 555 655 89999999999887 665 57889999999999998887
Q ss_pred cccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCC-------CEEeccCCCCCCCCCcc
Q 047576 238 EIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQL-------FHLDLSSNKLSGKIPSQ 310 (602)
Q Consensus 238 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~ 310 (602)
.+++|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+ .+|..
T Consensus 158 ---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~ 225 (571)
T 3cvr_A 158 ---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPEN 225 (571)
T ss_dssp ---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGG
T ss_pred ---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHH
Confidence 56889999999999987 666 65 88999999999988 5565 544 66 88999999998 47887
Q ss_pred cCCCCCCCEEeCCCCCCCCCCCcccccccc
Q 047576 311 IASMEDLTWLDLSNNNIKGSIPGEITKLSR 340 (602)
Q Consensus 311 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 340 (602)
+..+++|+.|+|++|.+++.+|..+..++.
T Consensus 226 l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 226 ILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp GGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred HhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 777899999999999998888887776543
No 334
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=1.4e-23 Score=206.61 Aligned_cols=189 Identities=16% Similarity=0.161 Sum_probs=165.7
Q ss_pred CCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCC-CCCCCcccccCcCCCceeeccc-ccCCCCc-ccccCCCCCcE
Q 047576 171 LTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNS-LIGPIPLTLSRLTSLKILILAQ-NQLSGLP-QEIGNLKNLML 247 (602)
Q Consensus 171 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~L~~-N~l~~ip-~~~~~l~~L~~ 247 (602)
.++|++|+|++|++++..+..|+++++|++|+|++|+ +++..+..|.++++|++|++++ |+++++| ..|.++++|++
T Consensus 30 ~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 30 PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp CTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 3589999999999999988899999999999999997 8877777899999999999999 9999975 57899999999
Q ss_pred EEccCCCCCCCCCCccCCCCCCc---cccCCCC-cCCCCCchhhhCCCCCC-EEeccCCCCCCCCCcccCCCCCCCEEeC
Q 047576 248 LDVGNNDIIGPIPSTLGLFSDLS---YLDLSCN-QFNSSIPNELTRLTQLF-HLDLSSNKLSGKIPSQIASMEDLTWLDL 322 (602)
Q Consensus 248 L~L~~N~l~~~~p~~l~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 322 (602)
|++++|++++ +|. +..+++|+ +|++++| .+++..+..|..+++|+ .|+|++|+++ .+|......++|+.|++
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L 186 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYL 186 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEEC
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEc
Confidence 9999999997 676 88888998 9999999 99988888899999999 9999999999 55554333489999999
Q ss_pred CCCC-CCCCCCcccccc-cccccccccCCcCCCccCCCCCcC
Q 047576 323 SNNN-IKGSIPGEITKL-SRLDYLNLSGNKLSGRVPYSNKHL 362 (602)
Q Consensus 323 ~~N~-l~~~~p~~~~~l-~~L~~L~l~~N~l~g~~p~~~~~l 362 (602)
++|+ +++..+..+..+ ++|+.|++++|++++..+..+..+
T Consensus 187 ~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~~~~~L 228 (239)
T 2xwt_C 187 NKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSKGLEHL 228 (239)
T ss_dssp TTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCTTCTTC
T ss_pred CCCCCcccCCHHHhhccccCCcEEECCCCccccCChhHhccC
Confidence 9995 997778889999 999999999999986544434333
No 335
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.89 E-value=1.3e-22 Score=195.12 Aligned_cols=176 Identities=26% Similarity=0.269 Sum_probs=122.9
Q ss_pred EEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcc-cccCCCCCcEEEccCCC
Q 047576 176 YMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQ-EIGNLKNLMLLDVGNND 254 (602)
Q Consensus 176 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~L~~N~ 254 (602)
.++.+++.++.. |..+ .++|++|+|++|++++..+..|.++++|++|++++|+++++|. .+.++++|++|+|++|+
T Consensus 11 ~v~c~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 11 TVECYSQGRTSV-PTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp EEECCSSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCccCC-CCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 344555555432 3222 3467777777777766555566677777777777777777544 35667777777777777
Q ss_pred CCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcc
Q 047576 255 IIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGE 334 (602)
Q Consensus 255 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 334 (602)
+++..+..+..+++|++|++++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|++++|.+.+.
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~---- 163 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT---- 163 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC----
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC----
Confidence 7766666667777777777777777766666677778888888888888776666677788888888888877643
Q ss_pred cccccccccccccCCcCCCccCCCCCc
Q 047576 335 ITKLSRLDYLNLSGNKLSGRVPYSNKH 361 (602)
Q Consensus 335 ~~~l~~L~~L~l~~N~l~g~~p~~~~~ 361 (602)
+++|+.|+++.|+++|.+|..+..
T Consensus 164 ---~~~l~~L~~~~n~~~g~ip~~~~~ 187 (208)
T 2o6s_A 164 ---CPGIRYLSEWINKHSGVVRNSAGS 187 (208)
T ss_dssp ---TTTTHHHHHHHHHCTTTBBCTTSS
T ss_pred ---CCCHHHHHHHHHhCCceeeccCcc
Confidence 456788888888888888876543
No 336
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=1.9e-22 Score=222.14 Aligned_cols=183 Identities=30% Similarity=0.369 Sum_probs=160.3
Q ss_pred CCCEEECcCCcCcc----cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeeccccc
Q 047576 156 KLQLLDLSSNRLRG----RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQ 231 (602)
Q Consensus 156 ~L~~L~Ls~N~i~~----~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 231 (602)
+|+.|+|++|+|++ .+++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|++|+|++|+
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~ 131 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLPPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQ 131 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCCTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSC
T ss_pred CccEEEeCCCCCCccCHhHcCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCc
Confidence 89999999999985 3567999999999999 556 568999999999999998 777 665 99999999999
Q ss_pred CCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCccc
Q 047576 232 LSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQI 311 (602)
Q Consensus 232 l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 311 (602)
|+++|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|.|++ +|. |. ++|+.|+|++|+|+ .+|. +
T Consensus 132 l~~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~ 198 (571)
T 3cvr_A 132 LTMLPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-V 198 (571)
T ss_dssp CSCCCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-C
T ss_pred CCCCCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-H
Confidence 999998 68999999999999997 666 57899999999999997 666 65 89999999999999 6776 6
Q ss_pred CCCCCC-------CEEeCCCCCCCCCCCcccccccccccccccCCcCCCccCCCCCcC
Q 047576 312 ASMEDL-------TWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYSNKHL 362 (602)
Q Consensus 312 ~~l~~L-------~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l 362 (602)
.. +| +.|+|++|+|+ .+|..+..+++|+.|++++|+++|.+|..+..+
T Consensus 199 ~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 199 PV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp C----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred HH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 54 77 99999999999 578888899999999999999999998776443
No 337
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=7.1e-22 Score=190.02 Aligned_cols=176 Identities=24% Similarity=0.267 Sum_probs=158.8
Q ss_pred CEEECcCCcCc----ccCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCC
Q 047576 158 QLLDLSSNRLR----GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLS 233 (602)
Q Consensus 158 ~~L~Ls~N~i~----~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 233 (602)
+.++++++.+. +..++|++|+|++|++++..+..|+++++|++|+|++|++++..+..|.++++|++|+|++|+++
T Consensus 10 ~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 89 (208)
T 2o6s_A 10 TTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ 89 (208)
T ss_dssp TEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCC
Confidence 57888888876 34678999999999999888888999999999999999999877777899999999999999999
Q ss_pred CCcc-cccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccC
Q 047576 234 GLPQ-EIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIA 312 (602)
Q Consensus 234 ~ip~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 312 (602)
++|. .+.++++|++|++++|++++..+..+..+++|++|++++|++++..+..+..+++|+.|+|++|.+.+.
T Consensus 90 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~------ 163 (208)
T 2o6s_A 90 SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT------ 163 (208)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC------
T ss_pred ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC------
Confidence 9765 478999999999999999988888899999999999999999988777799999999999999988754
Q ss_pred CCCCCCEEeCCCCCCCCCCCcccccccc
Q 047576 313 SMEDLTWLDLSNNNIKGSIPGEITKLSR 340 (602)
Q Consensus 313 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 340 (602)
+++|+.|+++.|+++|.+|..++.++.
T Consensus 164 -~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 164 -CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp -TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred -CCCHHHHHHHHHhCCceeeccCccccC
Confidence 568999999999999999999887764
No 338
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=3e-23 Score=217.28 Aligned_cols=227 Identities=19% Similarity=0.219 Sum_probs=156.4
Q ss_pred CCCccchhccccCCccccCC----ccCCCCC-CCCEEECcCCcCccc------------CCCcCEEECcCCcCCCCCchh
Q 047576 129 PNLESLRILAYYDGFTGSIP----SEISALS-KLQLLDLSSNRLRGR------------LTNLNYMSLSRNMLGGLLPQE 191 (602)
Q Consensus 129 ~~L~~L~l~~~~~~~~~~ip----~~l~~L~-~L~~L~Ls~N~i~~~------------l~~L~~L~L~~N~l~~~~p~~ 191 (602)
++|+.|++. ++.+.+..+ ..+.+++ +|++|+|++|+|++. .++|++|+|++|.+++..+..
T Consensus 22 ~~L~~L~Ls--~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~ 99 (362)
T 3goz_A 22 HGVTSLDLS--LNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDE 99 (362)
T ss_dssp TTCCEEECT--TSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHH
T ss_pred CCceEEEcc--CCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHH
Confidence 346666665 444444444 5677777 788888888888742 278888888888888777765
Q ss_pred hhCC-----CCCCEEEecCCCCCCCCcccccC-----cCCCceeecccccCCC-----CcccccCCC-CCcEEEccCCCC
Q 047576 192 IGNL-----KNLIELDVGDNSLIGPIPLTLSR-----LTSLKILILAQNQLSG-----LPQEIGNLK-NLMLLDVGNNDI 255 (602)
Q Consensus 192 ~~~l-----~~L~~L~L~~N~l~~~~p~~l~~-----l~~L~~L~L~~N~l~~-----ip~~~~~l~-~L~~L~L~~N~l 255 (602)
+... ++|++|+|++|++++..+..+.. .++|++|+|++|++++ ++..+..++ +|++|+|++|++
T Consensus 100 l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l 179 (362)
T 3goz_A 100 LVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNL 179 (362)
T ss_dssp HHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCG
T ss_pred HHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCC
Confidence 4443 78888888888887766655433 2588888888888874 344455555 888888888888
Q ss_pred CCCCCCccC----CC-CCCccccCCCCcCCCC----CchhhhC-CCCCCEEeccCCCCCCCCC----cccCCCCCCCEEe
Q 047576 256 IGPIPSTLG----LF-SDLSYLDLSCNQFNSS----IPNELTR-LTQLFHLDLSSNKLSGKIP----SQIASMEDLTWLD 321 (602)
Q Consensus 256 ~~~~p~~l~----~l-~~L~~L~L~~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~ 321 (602)
++..+..+. .. ++|++|+|++|.+++. ++..+.. .++|++|+|++|+|++..+ ..+..+++|+.|+
T Consensus 180 ~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~ 259 (362)
T 3goz_A 180 ASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVY 259 (362)
T ss_dssp GGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEE
T ss_pred chhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEE
Confidence 776664433 33 5888888888888763 3444554 3478888888888876544 3346677888888
Q ss_pred CCCCCCCCCC-------CcccccccccccccccCCcCCCccCC
Q 047576 322 LSNNNIKGSI-------PGEITKLSRLDYLNLSGNKLSGRVPY 357 (602)
Q Consensus 322 L~~N~l~~~~-------p~~~~~l~~L~~L~l~~N~l~g~~p~ 357 (602)
|++|.+++.. +..+..+++|+.|++++|++.+..+.
T Consensus 260 L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~ 302 (362)
T 3goz_A 260 LDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSI 302 (362)
T ss_dssp EEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCH
T ss_pred eccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchH
Confidence 8888855433 33566777788888888887766443
No 339
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.87 E-value=3.6e-21 Score=214.48 Aligned_cols=209 Identities=30% Similarity=0.349 Sum_probs=152.0
Q ss_pred CCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc---cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCC
Q 047576 130 NLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG---RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDN 206 (602)
Q Consensus 130 ~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~---~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 206 (602)
+++.|++. ++....+|..+. ++|++|+|++|+|++ .+++|++|+|++|+|++ +|. .+++|++|+|++|
T Consensus 41 ~l~~L~ls---~n~L~~lp~~l~--~~L~~L~L~~N~l~~lp~~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N 111 (622)
T 3g06_A 41 GNAVLNVG---ESGLTTLPDCLP--AHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSN 111 (622)
T ss_dssp CCCEEECC---SSCCSCCCSCCC--TTCSEEEECSCCCSCCCCCCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSC
T ss_pred CCcEEEec---CCCcCccChhhC--CCCcEEEecCCCCCCCCCcCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCC
Confidence 35555554 444458888776 899999999999884 57899999999999996 444 7899999999999
Q ss_pred CCCCCCcccccCcCCCceeecccccCCCCcccccCCCCCcEEEccCCCCCCC--CCCccCCC--------------CCCc
Q 047576 207 SLIGPIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGP--IPSTLGLF--------------SDLS 270 (602)
Q Consensus 207 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~--~p~~l~~l--------------~~L~ 270 (602)
++++ +|. .+++|+.|++++|+++++|.. +++|++|+|++|++++. .+..+..+ ++|+
T Consensus 112 ~l~~-l~~---~l~~L~~L~L~~N~l~~lp~~---l~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~ 184 (622)
T 3g06_A 112 PLTH-LPA---LPSGLCKLWIFGNQLTSLPVL---PPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGLQ 184 (622)
T ss_dssp CCCC-CCC---CCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCCCCTTCC
T ss_pred cCCC-CCC---CCCCcCEEECCCCCCCcCCCC---CCCCCEEECcCCcCCCcCCccCCCCEEECCCCCCCCCcccCCCCc
Confidence 9986 444 578999999999999999875 48899999999999862 22233333 7778
Q ss_pred cccCCCCcCCCCCchhhhC-----------------CCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCc
Q 047576 271 YLDLSCNQFNSSIPNELTR-----------------LTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPG 333 (602)
Q Consensus 271 ~L~L~~N~l~~~~p~~~~~-----------------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 333 (602)
.|++++|.+++ +|..+.+ +++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+. +|.
T Consensus 185 ~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~ 258 (622)
T 3g06_A 185 ELSVSDNQLAS-LPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM 258 (622)
T ss_dssp EEECCSSCCSC-CCCCCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC
T ss_pred EEECCCCCCCC-CCCccchhhEEECcCCcccccCCCCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc
Confidence 88888888875 3322211 1456666666666664 44 345677777777777773 444
Q ss_pred ccccccccccccccCCcCCCccCCCCCcCCC
Q 047576 334 EITKLSRLDYLNLSGNKLSGRVPYSNKHLSS 364 (602)
Q Consensus 334 ~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~ 364 (602)
.+++|+.|++++|+++ .+|..+..+..
T Consensus 259 ---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~ 285 (622)
T 3g06_A 259 ---LPSGLLSLSVYRNQLT-RLPESLIHLSS 285 (622)
T ss_dssp ---CCTTCCEEECCSSCCC-SCCGGGGGSCT
T ss_pred ---ccccCcEEeCCCCCCC-cCCHHHhhccc
Confidence 4567788888888887 66665544433
No 340
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.86 E-value=8.6e-24 Score=233.84 Aligned_cols=162 Identities=20% Similarity=0.120 Sum_probs=103.9
Q ss_pred ccccccccceeeec-CCCcEEeeeccCCch-------hHHHHHhhhhHhHHHHH--------------------------
Q 047576 377 IGTGAYGSVYKAQL-PNGRVFALKKLNSPE-------TEELAFIRSFRNEAQVL-------------------------- 422 (602)
Q Consensus 377 LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~-------~~~~~~~~~~~~E~~il-------------------------- 422 (602)
.+.|+.|.+..++. -.|+.||+|++.+.. .......++|.+|+++|
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 35566666665542 257889999886432 12233456799999988
Q ss_pred HhhhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCC
Q 047576 423 SQMERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHAD 502 (602)
Q Consensus 423 ~~l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~ 502 (602)
||++|++|.+.+... .+++.. +|+.||+.||+|+| ++|||||||||+|||++.++.+||+|||+|+....+
T Consensus 322 Eyv~G~~L~d~i~~~---~~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAAG---EEIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHTT---CCCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHhC---CCCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 667777777777653 235543 58999999999999 889999999999999999999999999999887665
Q ss_pred CCCccccccccccccccccccCcCCccchhHHHHHHHHHHHcCCCC
Q 047576 503 SSNQTLLAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHP 548 (602)
Q Consensus 503 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~P 548 (602)
.......+||+.|+|||++.+. +..++|+||+|++++++.+|..|
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence 5555667899999999998764 56789999999998877666544
No 341
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=7.7e-24 Score=223.72 Aligned_cols=218 Identities=19% Similarity=0.193 Sum_probs=182.4
Q ss_pred CccccCCccCCCCCCCCEEECcCCcCcc-----------cCCCcCEEECcCC---cCCCCCchhh-------hCCCCCCE
Q 047576 142 GFTGSIPSEISALSKLQLLDLSSNRLRG-----------RLTNLNYMSLSRN---MLGGLLPQEI-------GNLKNLIE 200 (602)
Q Consensus 142 ~~~~~ip~~l~~L~~L~~L~Ls~N~i~~-----------~l~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~ 200 (602)
.-...++..+..+++|++|+|++|+|++ .+++|++|+|++| ++++.+|..+ ..+++|++
T Consensus 19 ~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~ 98 (386)
T 2ca6_A 19 EDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHT 98 (386)
T ss_dssp HHHHTTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCE
T ss_pred HHHHHHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccE
Confidence 3445677888899999999999999873 4889999999996 5556677666 78999999
Q ss_pred EEecCCCCCC----CCcccccCcCCCceeecccccCCC-----CcccccCC---------CCCcEEEccCCCCC-CCCC-
Q 047576 201 LDVGDNSLIG----PIPLTLSRLTSLKILILAQNQLSG-----LPQEIGNL---------KNLMLLDVGNNDII-GPIP- 260 (602)
Q Consensus 201 L~L~~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~-----ip~~~~~l---------~~L~~L~L~~N~l~-~~~p- 260 (602)
|+|++|.+++ .+|..+..+++|++|+|++|.++. ++..+..+ ++|++|+|++|+++ +.+|
T Consensus 99 L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 178 (386)
T 2ca6_A 99 VRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKE 178 (386)
T ss_dssp EECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHH
T ss_pred EECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHH
Confidence 9999999998 477788999999999999999975 23334444 89999999999998 4455
Q ss_pred --CccCCCCCCccccCCCCcCCC-----CCchhhhCCCCCCEEeccCCCCC----CCCCcccCCCCCCCEEeCCCCCCCC
Q 047576 261 --STLGLFSDLSYLDLSCNQFNS-----SIPNELTRLTQLFHLDLSSNKLS----GKIPSQIASMEDLTWLDLSNNNIKG 329 (602)
Q Consensus 261 --~~l~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~L~~N~l~~ 329 (602)
..+..+++|++|+|++|+++. ..|..+..+++|+.|+|++|.|+ +.+|..+..+++|+.|+|++|++++
T Consensus 179 l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~ 258 (386)
T 2ca6_A 179 WAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSA 258 (386)
T ss_dssp HHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCH
T ss_pred HHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCch
Confidence 467788999999999999983 34447889999999999999996 5678889999999999999999987
Q ss_pred C----CCccc--ccccccccccccCCcCCC----ccCCCC
Q 047576 330 S----IPGEI--TKLSRLDYLNLSGNKLSG----RVPYSN 359 (602)
Q Consensus 330 ~----~p~~~--~~l~~L~~L~l~~N~l~g----~~p~~~ 359 (602)
. +|..+ +.+++|+.|++++|++++ .+|..+
T Consensus 259 ~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l 298 (386)
T 2ca6_A 259 RGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVI 298 (386)
T ss_dssp HHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHH
T ss_pred hhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHH
Confidence 6 56666 348999999999999998 466544
No 342
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.86 E-value=1.5e-21 Score=217.13 Aligned_cols=225 Identities=24% Similarity=0.292 Sum_probs=158.7
Q ss_pred CCCCCCCCEEECcCCcCc-----ccCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCcee
Q 047576 151 ISALSKLQLLDLSSNRLR-----GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKIL 225 (602)
Q Consensus 151 l~~L~~L~~L~Ls~N~i~-----~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 225 (602)
+..|++|+.|+|++|.|. +.+++|++|+|++|+|++..| +..+++|+.|+|++|+|++ +| .+..+++|+.|
T Consensus 39 ~~~L~~L~~L~l~~n~i~~l~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L 114 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSL 114 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCCCTTGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEE
T ss_pred hhcCCCCCEEECcCCCCCCChHHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEE
Confidence 456677777888887776 347788888888888887654 8888888888888888875 33 68888888888
Q ss_pred ecccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCC
Q 047576 226 ILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSG 305 (602)
Q Consensus 226 ~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 305 (602)
+|++|+++++| .+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.|++..| +..+++|+.|+|++|+|++
T Consensus 115 ~Ls~N~l~~l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 115 SLEHNGISDIN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 189 (605)
T ss_dssp ECTTSCCCCCG-GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred EecCCCCCCCc-cccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC
Confidence 88888888875 478888888888888888865 567888888888888888887665 8888888888888888886
Q ss_pred CCCcccCCCCCCCEEeCCCCCCCCCCCccccccccccc-------------ccccCCcCCCccCCCCCcCCCCCCCcccc
Q 047576 306 KIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDY-------------LNLSGNKLSGRVPYSNKHLSSMPTPRKID 372 (602)
Q Consensus 306 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~-------------L~l~~N~l~g~~p~~~~~l~~lp~t~~f~ 372 (602)
. ..+..+++|+.|+|++|++++.....+..+..+.. +...++...|.++..+. .......|.
T Consensus 190 l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~~~~~l~~l~g~~~~~~~i~~~g~~~~~~i~~~l~---~~~~~~~y~ 264 (605)
T 1m9s_A 190 L--RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLP---EFTNEVSFI 264 (605)
T ss_dssp C--GGGTTCTTCSEEECCSEEEECCCCCCCSSCEEECCCBCSSSCBCCCSEESTTCEEETTEEECCCS---SCCSEEEEE
T ss_pred C--hHHccCCCCCEEEccCCcCcCCcccccccEEecccccccCCCCcCchhcccCCcccCCcceeccc---cccceeEEE
Confidence 4 35788888888888888888654443333332222 22334445555555432 222222344
Q ss_pred Ccccccccccccceeee
Q 047576 373 SKYCIGTGAYGSVYKAQ 389 (602)
Q Consensus 373 ~~~~LG~G~~g~Vy~~~ 389 (602)
..+-+..|.....|.|+
T Consensus 265 f~~~~~~g~~~~~F~G~ 281 (605)
T 1m9s_A 265 FYQPVTIGKAKARFHGR 281 (605)
T ss_dssp EEEEEEETTEEEEEEEE
T ss_pred EeEEeecccceeeeccc
Confidence 44445555555555554
No 343
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.86 E-value=2.2e-21 Score=196.80 Aligned_cols=170 Identities=29% Similarity=0.381 Sum_probs=105.8
Q ss_pred CCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcccccCCCCCcEEEc
Q 047576 171 LTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDV 250 (602)
Q Consensus 171 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L 250 (602)
+++|++|++++|.++.. +.+..+++|++|+|++|++++..| +.++++|++|++++|+++++|. +.++++|+.|++
T Consensus 45 l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L 119 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLSS-LKDLKKLKSLSL 119 (291)
T ss_dssp HHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGGG-GTTCTTCCEEEC
T ss_pred cCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCChh-hccCCCCCEEEC
Confidence 44555555555555543 236666666666666666665433 6666666666666666666543 666666666666
Q ss_pred cCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCC
Q 047576 251 GNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGS 330 (602)
Q Consensus 251 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 330 (602)
++|++++. ..+..+++|++|++++|++++. ..+..+++|+.|+|++|++++..| +..+++|+.|++++|++++.
T Consensus 120 ~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l 193 (291)
T 1h6t_A 120 EHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL 193 (291)
T ss_dssp TTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred CCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC
Confidence 66666653 3455666666666666666654 356666667777777776665443 66666777777777766643
Q ss_pred CCcccccccccccccccCCcCCC
Q 047576 331 IPGEITKLSRLDYLNLSGNKLSG 353 (602)
Q Consensus 331 ~p~~~~~l~~L~~L~l~~N~l~g 353 (602)
+ .+..+++|+.|++++|+++.
T Consensus 194 -~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 194 -R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp -G-GGTTCTTCSEEEEEEEEEEC
T ss_pred -h-hhccCCCCCEEECcCCcccC
Confidence 3 36666667777777776655
No 344
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.85 E-value=5.6e-23 Score=212.51 Aligned_cols=202 Identities=21% Similarity=0.222 Sum_probs=177.2
Q ss_pred CccCCCC--CCCCEEECcCCcCccc------CCCcCEEECcCCcCCCC-CchhhhCCCCCCEEEecCCCCCCCCcccccC
Q 047576 148 PSEISAL--SKLQLLDLSSNRLRGR------LTNLNYMSLSRNMLGGL-LPQEIGNLKNLIELDVGDNSLIGPIPLTLSR 218 (602)
Q Consensus 148 p~~l~~L--~~L~~L~Ls~N~i~~~------l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 218 (602)
|..+..+ ++++.|++++|.+.+. +++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..|..++.
T Consensus 61 ~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~ 140 (336)
T 2ast_B 61 PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAK 140 (336)
T ss_dssp HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTT
T ss_pred HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhc
Confidence 5566677 8999999999998853 68999999999999876 8889999999999999999999888999999
Q ss_pred cCCCceeecccc-cCCC--CcccccCCCCCcEEEccCC-CCCCC-CCCccCCCC-CCccccCCCC--cCC-CCCchhhhC
Q 047576 219 LTSLKILILAQN-QLSG--LPQEIGNLKNLMLLDVGNN-DIIGP-IPSTLGLFS-DLSYLDLSCN--QFN-SSIPNELTR 289 (602)
Q Consensus 219 l~~L~~L~L~~N-~l~~--ip~~~~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~-~L~~L~L~~N--~l~-~~~p~~~~~ 289 (602)
+++|++|++++| .+++ +|..+.++++|++|++++| .+++. ++..+..++ +|++|++++| .++ +.+|..+..
T Consensus 141 ~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~ 220 (336)
T 2ast_B 141 NSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRR 220 (336)
T ss_dssp CTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhh
Confidence 999999999999 7885 7877899999999999999 99865 577788899 9999999999 566 556778889
Q ss_pred CCCCCEEeccCCC-CCCCCCcccCCCCCCCEEeCCCCC-CCCCCCcccccccccccccccCC
Q 047576 290 LTQLFHLDLSSNK-LSGKIPSQIASMEDLTWLDLSNNN-IKGSIPGEITKLSRLDYLNLSGN 349 (602)
Q Consensus 290 l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~l~~N 349 (602)
+++|++|+|++|. +++..+..+..+++|+.|++++|. ++......+..+++|+.|++++|
T Consensus 221 ~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 221 CPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 9999999999999 787888899999999999999995 33322336888999999999999
No 345
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.85 E-value=8.2e-23 Score=214.02 Aligned_cols=217 Identities=23% Similarity=0.208 Sum_probs=176.9
Q ss_pred cCCccccCCccCCCCCCCCEEECcCCcCccc-----------CC-CcCEEECcCCcCCCCCchhhhCC-----CCCCEEE
Q 047576 140 YDGFTGSIPSEISALSKLQLLDLSSNRLRGR-----------LT-NLNYMSLSRNMLGGLLPQEIGNL-----KNLIELD 202 (602)
Q Consensus 140 ~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~~-----------l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~ 202 (602)
.+++.|.+|..+...++|++|||++|+|++. ++ +|++|+|++|.+++..+..+..+ ++|++|+
T Consensus 7 ~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~ 86 (362)
T 3goz_A 7 LHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLN 86 (362)
T ss_dssp CCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEE
T ss_pred cccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEE
Confidence 5677888888888888899999999999842 55 89999999999999988888886 9999999
Q ss_pred ecCCCCCCCCcccccCc-----CCCceeecccccCCCCcc-c----ccC-CCCCcEEEccCCCCCCCCCC----ccCCCC
Q 047576 203 VGDNSLIGPIPLTLSRL-----TSLKILILAQNQLSGLPQ-E----IGN-LKNLMLLDVGNNDIIGPIPS----TLGLFS 267 (602)
Q Consensus 203 L~~N~l~~~~p~~l~~l-----~~L~~L~L~~N~l~~ip~-~----~~~-l~~L~~L~L~~N~l~~~~p~----~l~~l~ 267 (602)
|++|++++..+..+... ++|++|+|++|++++.+. . +.. .++|++|+|++|.+++..+. .+..++
T Consensus 87 Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~ 166 (362)
T 3goz_A 87 LSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIP 166 (362)
T ss_dssp CCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSC
T ss_pred CcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCC
Confidence 99999998888765544 899999999999998543 3 334 36999999999999965443 334555
Q ss_pred -CCccccCCCCcCCCCCchhhh----CC-CCCCEEeccCCCCCCC----CCcccCC-CCCCCEEeCCCCCCCCCCC----
Q 047576 268 -DLSYLDLSCNQFNSSIPNELT----RL-TQLFHLDLSSNKLSGK----IPSQIAS-MEDLTWLDLSNNNIKGSIP---- 332 (602)
Q Consensus 268 -~L~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~L~~N~l~~~~p---- 332 (602)
+|++|+|++|++++..+..+. .+ ++|++|+|++|+|++. ++..+.. .++|+.|+|++|.+++..+
T Consensus 167 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~ 246 (362)
T 3goz_A 167 ANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLK 246 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHH
T ss_pred ccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHH
Confidence 999999999999988876554 44 6999999999999864 3445555 4599999999999997655
Q ss_pred cccccccccccccccCCcCCCccC
Q 047576 333 GEITKLSRLDYLNLSGNKLSGRVP 356 (602)
Q Consensus 333 ~~~~~l~~L~~L~l~~N~l~g~~p 356 (602)
..+..+++|+.|++++|.+++..+
T Consensus 247 ~~~~~l~~L~~L~L~~n~l~~i~~ 270 (362)
T 3goz_A 247 LLKDSLKHLQTVYLDYDIVKNMSK 270 (362)
T ss_dssp HTTTTTTTCSEEEEEHHHHTTCCH
T ss_pred HHHhcCCCccEEEeccCCccccCH
Confidence 345677899999999999765443
No 346
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=1.1e-20 Score=184.70 Aligned_cols=136 Identities=30% Similarity=0.317 Sum_probs=108.7
Q ss_pred CCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcc-cccCCCCCcEEEc
Q 047576 172 TNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQ-EIGNLKNLMLLDV 250 (602)
Q Consensus 172 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~L 250 (602)
++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+++++|. .+..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 345666666777777778888888888888888888876666677888888888888888888654 4678888888888
Q ss_pred cCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCC
Q 047576 251 GNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIP 308 (602)
Q Consensus 251 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 308 (602)
++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+....+
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 888888 677778888888888888888887777778888888888888888876554
No 347
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.85 E-value=5e-21 Score=194.25 Aligned_cols=173 Identities=28% Similarity=0.380 Sum_probs=151.5
Q ss_pred CCCCCCCCEEECcCCcCc-----ccCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCcee
Q 047576 151 ISALSKLQLLDLSSNRLR-----GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKIL 225 (602)
Q Consensus 151 l~~L~~L~~L~Ls~N~i~-----~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 225 (602)
+..+++|++|++++|.+. +.+++|++|+|++|++++..+ +.++++|++|+|++|++++ +| .+..+++|++|
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L 117 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSL 117 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEE
T ss_pred hhhcCcccEEEccCCCcccChhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEE
Confidence 456788999999999887 347899999999999998655 9999999999999999986 33 49999999999
Q ss_pred ecccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCC
Q 047576 226 ILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSG 305 (602)
Q Consensus 226 ~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 305 (602)
++++|++++++ .+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|+|++|+|++
T Consensus 118 ~L~~n~i~~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 118 SLEHNGISDIN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp ECTTSCCCCCG-GGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred ECCCCcCCCCh-hhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC
Confidence 99999999985 688999999999999999976 578899999999999999997655 8999999999999999986
Q ss_pred CCCcccCCCCCCCEEeCCCCCCCCCCCcc
Q 047576 306 KIPSQIASMEDLTWLDLSNNNIKGSIPGE 334 (602)
Q Consensus 306 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 334 (602)
+| .+..+++|+.|++++|+++......
T Consensus 193 -l~-~l~~l~~L~~L~l~~n~i~~~~~~~ 219 (291)
T 1h6t_A 193 -LR-ALAGLKNLDVLELFSQECLNKPINH 219 (291)
T ss_dssp -CG-GGTTCTTCSEEEEEEEEEECCCEEC
T ss_pred -Ch-hhccCCCCCEEECcCCcccCCcccc
Confidence 44 4899999999999999998644333
No 348
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.85 E-value=8e-21 Score=184.57 Aligned_cols=153 Identities=22% Similarity=0.264 Sum_probs=80.2
Q ss_pred EEEecCCCCCCCCcccccCcCCCceeecccccCCCC-c-ccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCC
Q 047576 200 ELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGL-P-QEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCN 277 (602)
Q Consensus 200 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~i-p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 277 (602)
.+++++|.++. +|..+. +.+++|+|++|+++++ | ..+.++++|+.|+|++|++++..+..|..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 44444444442 333332 2334555555555553 2 12445555555555555555544445555555555555555
Q ss_pred cCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCcc
Q 047576 278 QFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRV 355 (602)
Q Consensus 278 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~ 355 (602)
++++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..|..|..+++|+.|++++|++++..
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 555555555555555555555555555555555555555555555555555555555555555555555555555543
No 349
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.84 E-value=3.2e-23 Score=223.78 Aligned_cols=199 Identities=21% Similarity=0.158 Sum_probs=84.7
Q ss_pred CCCCCEEECcCCcCcc-----------cCCCcCEEECcCCcCCCCCchhhhC-----CCCCCEEEecCCCCCCC----Cc
Q 047576 154 LSKLQLLDLSSNRLRG-----------RLTNLNYMSLSRNMLGGLLPQEIGN-----LKNLIELDVGDNSLIGP----IP 213 (602)
Q Consensus 154 L~~L~~L~Ls~N~i~~-----------~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~----~p 213 (602)
+++|++|+|++|++++ .+++|++|+|++|.++...+..+.. +++|++|+|++|.+++. ++
T Consensus 141 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 220 (461)
T 1z7x_W 141 QCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLC 220 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHH
T ss_pred CCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHH
Confidence 3445555555555442 1345555555555544333333321 34455555555554432 23
Q ss_pred ccccCcCCCceeecccccCCCC------cccccCCCCCcEEEccCCCCCCC----CCCccCCCCCCccccCCCCcCCCCC
Q 047576 214 LTLSRLTSLKILILAQNQLSGL------PQEIGNLKNLMLLDVGNNDIIGP----IPSTLGLFSDLSYLDLSCNQFNSSI 283 (602)
Q Consensus 214 ~~l~~l~~L~~L~L~~N~l~~i------p~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~ 283 (602)
..+..+++|++|++++|++++. +..+..+++|+.|++++|.+++. ++..+..+++|++|++++|.+++..
T Consensus 221 ~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 300 (461)
T 1z7x_W 221 GIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEG 300 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHH
T ss_pred HHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHH
Confidence 3444445555555555544431 11112344455555555544432 2333344444455555554444332
Q ss_pred chhhhC-----CCCCCEEeccCCCCCCC----CCcccCCCCCCCEEeCCCCCCCCCCCccccc-----ccccccccccCC
Q 047576 284 PNELTR-----LTQLFHLDLSSNKLSGK----IPSQIASMEDLTWLDLSNNNIKGSIPGEITK-----LSRLDYLNLSGN 349 (602)
Q Consensus 284 p~~~~~-----l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~l~~N 349 (602)
+..+.. .++|++|+|++|.+++. ++..+..+++|+.|++++|++++..+..+.. .++|+.|++++|
T Consensus 301 ~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n 380 (461)
T 1z7x_W 301 ARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADC 380 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCC
Confidence 222221 13444444444444432 2233334444444444444444333322221 334444444444
Q ss_pred cCC
Q 047576 350 KLS 352 (602)
Q Consensus 350 ~l~ 352 (602)
+++
T Consensus 381 ~i~ 383 (461)
T 1z7x_W 381 DVS 383 (461)
T ss_dssp CCC
T ss_pred CCC
Confidence 444
No 350
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.84 E-value=8.2e-21 Score=211.22 Aligned_cols=188 Identities=27% Similarity=0.346 Sum_probs=166.0
Q ss_pred CCCEEECcCCcCcc-----cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccc
Q 047576 156 KLQLLDLSSNRLRG-----RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQN 230 (602)
Q Consensus 156 ~L~~L~Ls~N~i~~-----~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 230 (602)
.+..+.|+.+.+.. .+++|++|+|++|.+... +.+..+++|+.|+|++|+|++..| +..+++|+.|+|++|
T Consensus 22 ~l~~l~l~~~~i~~~~~~~~L~~L~~L~l~~n~i~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N 97 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDEN 97 (605)
T ss_dssp HHHHHHTTCSCTTSEECHHHHTTCCCCBCTTCCCCCC--TTGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred HHHHHhccCCCcccccchhcCCCCCEEECcCCCCCCC--hHHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCC
Confidence 34455666666653 588999999999999865 369999999999999999997655 999999999999999
Q ss_pred cCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcc
Q 047576 231 QLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQ 310 (602)
Q Consensus 231 ~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 310 (602)
+++++| .+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|+|++..|
T Consensus 98 ~l~~l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-- 170 (605)
T 1m9s_A 98 KIKDLS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-- 170 (605)
T ss_dssp CCCCCT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--
T ss_pred CCCCCh-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--
Confidence 999987 689999999999999999974 4588999999999999999976 579999999999999999998766
Q ss_pred cCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccC
Q 047576 311 IASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVP 356 (602)
Q Consensus 311 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 356 (602)
+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++...
T Consensus 171 l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 171 LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCC
T ss_pred hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcc
Confidence 99999999999999999974 468999999999999999988643
No 351
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=1.8e-20 Score=195.25 Aligned_cols=172 Identities=19% Similarity=0.169 Sum_probs=75.9
Q ss_pred CCCccchhccccCCccccCC-ccCCCCCCCCEEECcCCcCcc--------cCCCcCE-EECcCCcCCCCCchhhhCCCCC
Q 047576 129 PNLESLRILAYYDGFTGSIP-SEISALSKLQLLDLSSNRLRG--------RLTNLNY-MSLSRNMLGGLLPQEIGNLKNL 198 (602)
Q Consensus 129 ~~L~~L~l~~~~~~~~~~ip-~~l~~L~~L~~L~Ls~N~i~~--------~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L 198 (602)
++++.|++. +|.+ ..|| .+|.++++|++|+|++|++.+ .+++|++ +.++.|+|+...|..|..+++|
T Consensus 30 ~~l~~L~Ls--~N~i-~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L 106 (350)
T 4ay9_X 30 RNAIELRFV--LTKL-RVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNL 106 (350)
T ss_dssp TTCSEEEEE--SCCC-SEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTC
T ss_pred CCCCEEEcc--CCcC-CCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccc
Confidence 345555543 2333 3343 345666666666666555432 1233332 3344455554444455555555
Q ss_pred CEEEecCCCCCCCCcccccCcCCCceeeccc-ccCCCCcc-cccCC-CCCcEEEccCCCCCCCCCCccCCCCCCccccCC
Q 047576 199 IELDVGDNSLIGPIPLTLSRLTSLKILILAQ-NQLSGLPQ-EIGNL-KNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLS 275 (602)
Q Consensus 199 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~ip~-~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 275 (602)
++|++++|++++..+..+....++..|++.+ |+++.+|. .+..+ ..++.|+|++|+|+. +|.......+|++|+++
T Consensus 107 ~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~ 185 (350)
T 4ay9_X 107 QYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLS 185 (350)
T ss_dssp CEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECT
T ss_pred ccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-CChhhccccchhHHhhc
Confidence 5555555555444444444444444444433 34444332 23332 234445555555542 22222233344555544
Q ss_pred C-CcCCCCCchhhhCCCCCCEEeccCCCCC
Q 047576 276 C-NQFNSSIPNELTRLTQLFHLDLSSNKLS 304 (602)
Q Consensus 276 ~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 304 (602)
+ |.++...+..|..+++|+.|||++|+|+
T Consensus 186 ~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 186 DNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp TCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred cCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 3 3333222233444555555555555554
No 352
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.84 E-value=8.4e-21 Score=198.63 Aligned_cols=157 Identities=27% Similarity=0.246 Sum_probs=92.3
Q ss_pred CCCEEEecCCCCCCCCccccc-CcCCCceeecccccCCCCc-ccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccC
Q 047576 197 NLIELDVGDNSLIGPIPLTLS-RLTSLKILILAQNQLSGLP-QEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDL 274 (602)
Q Consensus 197 ~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~L~~N~l~~ip-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 274 (602)
.++.|+|++|+|++..+..+. ++++|++|+|++|+|++++ ..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 119 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLL 119 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEEC
Confidence 355666666666555555554 5666666666666666643 34556666666666666666555555666666666666
Q ss_pred CCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCccc---CCCCCCCEEeCCCCCCCCCCCcccccccc--cccccccCC
Q 047576 275 SCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQI---ASMEDLTWLDLSNNNIKGSIPGEITKLSR--LDYLNLSGN 349 (602)
Q Consensus 275 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~l~~N 349 (602)
++|+|++..|..|..+++|+.|+|++|+|++..+..+ ..+++|+.|+|++|+|++..+..+..++. |+.|++++|
T Consensus 120 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N 199 (361)
T 2xot_A 120 YNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNN 199 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSS
T ss_pred CCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCC
Confidence 6666665556666666666666666666664333333 44666666666666666555555556655 356666666
Q ss_pred cCCC
Q 047576 350 KLSG 353 (602)
Q Consensus 350 ~l~g 353 (602)
++..
T Consensus 200 ~~~C 203 (361)
T 2xot_A 200 PLEC 203 (361)
T ss_dssp CEEC
T ss_pred CccC
Confidence 6653
No 353
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=2.5e-20 Score=181.10 Aligned_cols=153 Identities=16% Similarity=0.211 Sum_probs=100.5
Q ss_pred EEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCc-ccccCcCCCceeecccccCCCCc-ccccCCCCCcEEEccCC
Q 047576 176 YMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIP-LTLSRLTSLKILILAQNQLSGLP-QEIGNLKNLMLLDVGNN 253 (602)
Q Consensus 176 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~ip-~~~~~l~~L~~L~L~~N 253 (602)
++++++|.++. +|..+. ..+++|+|++|+|++..| ..|.++++|++|+|++|++++++ ..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 45555555553 343332 345666666666665544 34566667777777777766643 35666677777777777
Q ss_pred CCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCC
Q 047576 254 DIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSI 331 (602)
Q Consensus 254 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 331 (602)
++++..|..|..+++|++|+|++|++++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|.+++..
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 776666666667777777777777777666667777777777777777777766777777777777777777776543
No 354
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.83 E-value=1.5e-22 Score=218.54 Aligned_cols=226 Identities=20% Similarity=0.164 Sum_probs=184.0
Q ss_pred CCccchhccccCCcc----ccCCccCCCCCCCCEEECcCCcCcc------------cCCCcCEEECcCCcCCCCC----c
Q 047576 130 NLESLRILAYYDGFT----GSIPSEISALSKLQLLDLSSNRLRG------------RLTNLNYMSLSRNMLGGLL----P 189 (602)
Q Consensus 130 ~L~~L~l~~~~~~~~----~~ip~~l~~L~~L~~L~Ls~N~i~~------------~l~~L~~L~L~~N~l~~~~----p 189 (602)
+|++|++. ++.+. +.+|..+..+++|++|+|++|.+.+ ..++|++|+|++|++++.. +
T Consensus 86 ~L~~L~L~--~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 163 (461)
T 1z7x_W 86 KIQKLSLQ--NCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 163 (461)
T ss_dssp CCCEEECT--TSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred ceeEEEcc--CCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHH
Confidence 68888876 45555 3678899999999999999999873 1457999999999999754 6
Q ss_pred hhhhCCCCCCEEEecCCCCCCCCccccc-----CcCCCceeecccccCCC-----CcccccCCCCCcEEEccCCCCCCCC
Q 047576 190 QEIGNLKNLIELDVGDNSLIGPIPLTLS-----RLTSLKILILAQNQLSG-----LPQEIGNLKNLMLLDVGNNDIIGPI 259 (602)
Q Consensus 190 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~-----~l~~L~~L~L~~N~l~~-----ip~~~~~l~~L~~L~L~~N~l~~~~ 259 (602)
..+..+++|++|+|++|.+++..+..+. ..++|++|++++|++++ ++..+..+++|+.|++++|.+++..
T Consensus 164 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 243 (461)
T 1z7x_W 164 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG 243 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHH
Confidence 6778889999999999998765555443 36699999999999998 4777888999999999999987642
Q ss_pred -----CCccCCCCCCccccCCCCcCCCC----CchhhhCCCCCCEEeccCCCCCCCCCcccC-----CCCCCCEEeCCCC
Q 047576 260 -----PSTLGLFSDLSYLDLSCNQFNSS----IPNELTRLTQLFHLDLSSNKLSGKIPSQIA-----SMEDLTWLDLSNN 325 (602)
Q Consensus 260 -----p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~L~~N 325 (602)
+..+..+++|++|++++|.+++. ++..+..+++|++|+|++|.+++..+..+. ..++|+.|++++|
T Consensus 244 ~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n 323 (461)
T 1z7x_W 244 MAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSC 323 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCC
Confidence 33344688999999999999875 577788899999999999999765444443 3379999999999
Q ss_pred CCCCC----CCcccccccccccccccCCcCCCccCC
Q 047576 326 NIKGS----IPGEITKLSRLDYLNLSGNKLSGRVPY 357 (602)
Q Consensus 326 ~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~~p~ 357 (602)
.+++. ++..+..+++|+.|++++|++++..+.
T Consensus 324 ~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 359 (461)
T 1z7x_W 324 SFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVR 359 (461)
T ss_dssp CCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHH
T ss_pred CCchHHHHHHHHHHhhCCCccEEEccCCccccccHH
Confidence 99976 566777889999999999999876443
No 355
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=4e-20 Score=179.61 Aligned_cols=133 Identities=23% Similarity=0.252 Sum_probs=70.5
Q ss_pred CCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCC-CcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccC
Q 047576 196 KNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSG-LPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDL 274 (602)
Q Consensus 196 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 274 (602)
++|++|+|++|+|++..+..|.++++|+.|+|++|++++ .|..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 345555555555554444455555555555555555555 2444555555555555555555443444455555555555
Q ss_pred CCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCC
Q 047576 275 SCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIK 328 (602)
Q Consensus 275 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 328 (602)
++|++++..|..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|.+.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 555555555555555555555555555555544445555555555555555554
No 356
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=4.1e-20 Score=179.53 Aligned_cols=153 Identities=22% Similarity=0.289 Sum_probs=141.1
Q ss_pred CEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcc-cccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCC
Q 047576 199 IELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQ-EIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCN 277 (602)
Q Consensus 199 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 277 (602)
+.+++++|.++ .+|..+. ++|+.|+|++|+++++|. .|.++++|+.|+|++|++++..|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 67899999987 4676654 789999999999999654 7899999999999999999999999999999999999999
Q ss_pred cCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCc
Q 047576 278 QFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGR 354 (602)
Q Consensus 278 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 354 (602)
+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..+..+..+++|+.|++++|++...
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 99977777789999999999999999999999999999999999999999998888899999999999999999764
No 357
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=1.1e-20 Score=197.72 Aligned_cols=173 Identities=27% Similarity=0.238 Sum_probs=140.1
Q ss_pred CEEECcCCcCcc----cCCCcCEEECcCCcCCCCCchhhh-CCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccC
Q 047576 158 QLLDLSSNRLRG----RLTNLNYMSLSRNMLGGLLPQEIG-NLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQL 232 (602)
Q Consensus 158 ~~L~Ls~N~i~~----~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 232 (602)
+.+++++|+++. ..+.+++|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 21 ~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l 100 (361)
T 2xot_A 21 NILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHL 100 (361)
T ss_dssp TEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcC
Confidence 355666665552 234577888888888888788887 899999999999999888888899999999999999999
Q ss_pred CCCc-ccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhh---hCCCCCCEEeccCCCCCCCCC
Q 047576 233 SGLP-QEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNEL---TRLTQLFHLDLSSNKLSGKIP 308 (602)
Q Consensus 233 ~~ip-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~~p 308 (602)
+++| ..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++..+
T Consensus 101 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~ 180 (361)
T 2xot_A 101 HTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPL 180 (361)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCH
T ss_pred CcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCH
Confidence 9864 468889999999999999998888889999999999999999987555555 568899999999999997666
Q ss_pred cccCCCCC--CCEEeCCCCCCCCC
Q 047576 309 SQIASMED--LTWLDLSNNNIKGS 330 (602)
Q Consensus 309 ~~~~~l~~--L~~L~L~~N~l~~~ 330 (602)
..+..++. ++.|+|++|.+...
T Consensus 181 ~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 181 TDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp HHHHHSCHHHHTTEECCSSCEECC
T ss_pred HHhhhccHhhcceEEecCCCccCC
Confidence 67777776 48899999998753
No 358
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.83 E-value=1.8e-21 Score=221.63 Aligned_cols=236 Identities=17% Similarity=0.194 Sum_probs=90.5
Q ss_pred CCCCCCCCCceeCCCCCEEEEEecCCCCCCCcccccCCCCCCCCCccchhcc--ccCCccccCCccCCCCCCCCEEECcC
Q 047576 87 DSDHCEWIGITCNSAGSIIGLHLSKDNVNFNGRLSHLNFSCFPNLESLRILA--YYDGFTGSIPSEISALSKLQLLDLSS 164 (602)
Q Consensus 87 ~~~~C~w~gv~C~~~~~v~~l~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~--~~~~~~~~ip~~l~~L~~L~~L~Ls~ 164 (602)
....+.|.+++++. .+++.+++...++.... ..+-....|..+.+.. ...+.....|..+..++
T Consensus 159 ~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~~----~~~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~--------- 224 (727)
T 4b8c_D 159 STPSGTATNSAVST-PLTPKIELFANGKDEAN----QALLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQ--------- 224 (727)
T ss_dssp --------------------------------------------------------------------CCC---------
T ss_pred CCccccCCCceecC-CccceEEeeCCCCCcch----hhHhhcCccCcccccCccccccceecChhhhccCC---------
Confidence 44567899998875 67788887544332110 0000111112111110 01111112333444444
Q ss_pred CcCcccCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcccccCCCC
Q 047576 165 NRLRGRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKN 244 (602)
Q Consensus 165 N~i~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~ 244 (602)
+|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|+++++|++|+|++|+|+.+|..++++++
T Consensus 225 --------~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~ 294 (727)
T 4b8c_D 225 --------LWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQ 294 (727)
T ss_dssp --------CCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTT
T ss_pred --------CCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCC
Confidence 4555555555555 44555556777777777777766 5666667777777777777777777766777777
Q ss_pred CcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCC-CCEEeccCCCCCCCCCcccCCCCCCCEEeCC
Q 047576 245 LMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQ-LFHLDLSSNKLSGKIPSQIASMEDLTWLDLS 323 (602)
Q Consensus 245 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 323 (602)
|++|+|++|.|+ .+|..|+.+++|++|+|++|.|++.+|..+..+.. +..++|++|.++|.+|.. |..|+++
T Consensus 295 L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~ 367 (727)
T 4b8c_D 295 LKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEIN 367 (727)
T ss_dssp CSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-------------
T ss_pred CCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEee
Confidence 777777777765 55666777777777777777777666666544321 123566777777666543 3344455
Q ss_pred CC--------CCCCCCCcccccccccccccccCCcCCC
Q 047576 324 NN--------NIKGSIPGEITKLSRLDYLNLSGNKLSG 353 (602)
Q Consensus 324 ~N--------~l~~~~p~~~~~l~~L~~L~l~~N~l~g 353 (602)
+| .+.+..+..+..+..+....+++|-+++
T Consensus 368 ~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 368 TDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp ----------------------------------CCCG
T ss_pred cccccccccCCccccccchhhcccccceeeeecccccc
Confidence 44 3444444455566666667777777654
No 359
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=1.4e-19 Score=176.90 Aligned_cols=153 Identities=27% Similarity=0.344 Sum_probs=119.7
Q ss_pred CEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcc-cccCCCCCcEEEccCC
Q 047576 175 NYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQ-EIGNLKNLMLLDVGNN 253 (602)
Q Consensus 175 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~L~~N 253 (602)
+.++.+++.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+++.+|. .+.++++|+.|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 45666666665 3444333 788888888888888888888888888888888888888764 4678888888888888
Q ss_pred CCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCC
Q 047576 254 DIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSI 331 (602)
Q Consensus 254 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 331 (602)
+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..+..+++|+.|+|++|.+++..
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 888777777788888888888888887 66777888888888888888888766667788888888888888887654
No 360
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.82 E-value=3.2e-20 Score=176.95 Aligned_cols=155 Identities=18% Similarity=0.301 Sum_probs=121.1
Q ss_pred hhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCcc
Q 047576 192 IGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSY 271 (602)
Q Consensus 192 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 271 (602)
.+.+++|++|++++|.++ .+| .+..+++|++|++++|.++.++ .+..+++|++|++++|++++..|..++.+++|++
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNYN-PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCCG-GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcch-hhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 366677888888888877 455 5777888888888888776665 5778888888888888888777888888888888
Q ss_pred ccCCCCcCCCCCchhhhCCCCCCEEeccCCC-CCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCc
Q 047576 272 LDLSCNQFNSSIPNELTRLTQLFHLDLSSNK-LSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNK 350 (602)
Q Consensus 272 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 350 (602)
|++++|.+++..|..++.+++|++|+|++|+ ++ .+| .+..+++|+.|++++|++++. + .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcc
Confidence 8888888888778888888888888888887 55 455 678888888888888888863 3 67888888888888888
Q ss_pred CCC
Q 047576 351 LSG 353 (602)
Q Consensus 351 l~g 353 (602)
+.+
T Consensus 193 i~~ 195 (197)
T 4ezg_A 193 IGG 195 (197)
T ss_dssp ---
T ss_pred cCC
Confidence 754
No 361
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.82 E-value=6e-20 Score=191.26 Aligned_cols=199 Identities=22% Similarity=0.214 Sum_probs=158.0
Q ss_pred ccCCccCCCCCCCCEEECcCCcCc-------ccCCCcCEEECcCCcCCCCCc-hhhhCCCCCCE-EEecCCCCCCCCccc
Q 047576 145 GSIPSEISALSKLQLLDLSSNRLR-------GRLTNLNYMSLSRNMLGGLLP-QEIGNLKNLIE-LDVGDNSLIGPIPLT 215 (602)
Q Consensus 145 ~~ip~~l~~L~~L~~L~Ls~N~i~-------~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L~~N~l~~~~p~~ 215 (602)
..||..+ .+++++|+|++|+|+ +.+++|++|+|++|++.+.+| ..|.++++|++ +.++.|++++..|..
T Consensus 22 t~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~ 99 (350)
T 4ay9_X 22 TEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEA 99 (350)
T ss_dssp CSCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTS
T ss_pred CccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchh
Confidence 3567655 368999999999997 348899999999999877655 57889998875 667789999888899
Q ss_pred ccCcCCCceeecccccCCCCcc-cccCCCCCcEEEccC-CCCCCCCCCccCCCC-CCccccCCCCcCCCCCchhhhCCCC
Q 047576 216 LSRLTSLKILILAQNQLSGLPQ-EIGNLKNLMLLDVGN-NDIIGPIPSTLGLFS-DLSYLDLSCNQFNSSIPNELTRLTQ 292 (602)
Q Consensus 216 l~~l~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~ 292 (602)
|.++++|++|++++|+++.+|+ .+....++..|++.+ |+++...+..|..+. .++.|+|++|+|+.. |.......+
T Consensus 100 f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i-~~~~f~~~~ 178 (350)
T 4ay9_X 100 FQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI-HNSAFNGTQ 178 (350)
T ss_dssp BCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE-CTTSSTTEE
T ss_pred hhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCC-Chhhccccc
Confidence 9999999999999999999765 456667888899866 567765566676664 688999999999854 444445678
Q ss_pred CCEEeccC-CCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccc
Q 047576 293 LFHLDLSS-NKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNL 346 (602)
Q Consensus 293 L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 346 (602)
|+.|++++ |.++...+..|..+++|+.|+|++|+|+...+..+.++++|+.+++
T Consensus 179 L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~ 233 (350)
T 4ay9_X 179 LDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST 233 (350)
T ss_dssp EEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC
T ss_pred hhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC
Confidence 99999985 6676544567899999999999999999766666777776666654
No 362
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.81 E-value=3.2e-20 Score=185.45 Aligned_cols=166 Identities=22% Similarity=0.324 Sum_probs=96.9
Q ss_pred CCCCCCEEECcCCcCcc-----cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeec
Q 047576 153 ALSKLQLLDLSSNRLRG-----RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILIL 227 (602)
Q Consensus 153 ~L~~L~~L~Ls~N~i~~-----~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 227 (602)
.+.++..+++++|.+.+ .+++|++|++++|.++.. | .+..+++|++|+|++|++++..| +.++++|++|+|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L 92 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEECHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEEC
T ss_pred HHHHHHHHHhcCCCcccccchhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEEC
Confidence 34455556666666653 356666666666666543 2 46666666666666666664333 666666666666
Q ss_pred ccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCC
Q 047576 228 AQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKI 307 (602)
Q Consensus 228 ~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 307 (602)
++|+++++|.... ++|+.|+|++|++++. + .+..+++|+.|++++|++++. + .+..+++|+.|+|++|++++.
T Consensus 93 ~~N~l~~l~~~~~--~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~- 165 (263)
T 1xeu_A 93 NRNRLKNLNGIPS--ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT- 165 (263)
T ss_dssp CSSCCSCCTTCCC--SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-
T ss_pred CCCccCCcCcccc--CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch-
Confidence 6666666554222 5666666666666542 2 355666666666666666543 2 455666666666666666544
Q ss_pred CcccCCCCCCCEEeCCCCCCCCC
Q 047576 308 PSQIASMEDLTWLDLSNNNIKGS 330 (602)
Q Consensus 308 p~~~~~l~~L~~L~L~~N~l~~~ 330 (602)
..+..+++|+.|++++|.+++.
T Consensus 166 -~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHhccCCCCCEEeCCCCcccCC
Confidence 4455666666666666666544
No 363
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=5.4e-22 Score=219.36 Aligned_cols=181 Identities=25% Similarity=0.274 Sum_probs=123.9
Q ss_pred CCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCC-------------CCCCCcccccCcCCCceee-cccccCCCCcc
Q 047576 172 TNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNS-------------LIGPIPLTLSRLTSLKILI-LAQNQLSGLPQ 237 (602)
Q Consensus 172 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~l~~l~~L~~L~-L~~N~l~~ip~ 237 (602)
++|+.|+|++|+|+ .+|..++++++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+..++.
T Consensus 349 ~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~~ 427 (567)
T 1dce_A 349 EQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRS 427 (567)
T ss_dssp TTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred ccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhhh
Confidence 34444444445544 445666666666666655443 4455555666666666666 44444333221
Q ss_pred ------cccC--CCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCc
Q 047576 238 ------EIGN--LKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPS 309 (602)
Q Consensus 238 ------~~~~--l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 309 (602)
.+.. ...|+.|+|++|+|++ +|. ++.+++|+.|+|++|.|+ .+|..++++++|+.|+|++|+|++ +|
T Consensus 428 l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp- 502 (567)
T 1dce_A 428 KFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD- 502 (567)
T ss_dssp HHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-
T ss_pred hhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-
Confidence 0111 1257888888888886 565 788888888888888887 677788888888888888888886 56
Q ss_pred ccCCCCCCCEEeCCCCCCCCCC-CcccccccccccccccCCcCCCccCCC
Q 047576 310 QIASMEDLTWLDLSNNNIKGSI-PGEITKLSRLDYLNLSGNKLSGRVPYS 358 (602)
Q Consensus 310 ~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~g~~p~~ 358 (602)
.++.+++|+.|+|++|+|++.+ |..+..+++|+.|++++|++++..|..
T Consensus 503 ~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 503 GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 7888888888888888888776 888888888888888888888876643
No 364
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.80 E-value=3.5e-20 Score=185.10 Aligned_cols=167 Identities=25% Similarity=0.368 Sum_probs=75.2
Q ss_pred cCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcccccCCCCCcEEEccCC
Q 047576 174 LNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNN 253 (602)
Q Consensus 174 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N 253 (602)
+..+++++|.+++.. .+..+++|++|++++|.++. +| .+..+++|+.|+|++|+++++|. +.++++|+.|+|++|
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N 95 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRN 95 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSS
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEECCCC
Confidence 344444444444332 34444444555555444442 22 34444445555555554444443 444444555555555
Q ss_pred CCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCc
Q 047576 254 DIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPG 333 (602)
Q Consensus 254 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 333 (602)
++++ +|.. .. ++|+.|+|++|++++. + .+..+++|+.|+|++|+|++. + .+..+++|+.|+|++|++++. .
T Consensus 96 ~l~~-l~~~-~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~ 166 (263)
T 1xeu_A 96 RLKN-LNGI-PS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--G 166 (263)
T ss_dssp CCSC-CTTC-CC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--T
T ss_pred ccCC-cCcc-cc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--H
Confidence 4443 2221 11 4444445555544432 1 344444455555555544432 2 344444455555555544433 3
Q ss_pred ccccccccccccccCCcCCCc
Q 047576 334 EITKLSRLDYLNLSGNKLSGR 354 (602)
Q Consensus 334 ~~~~l~~L~~L~l~~N~l~g~ 354 (602)
.+..+++|+.|++++|++++.
T Consensus 167 ~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 167 GLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TSTTCCCCCEEEEEEEEEECC
T ss_pred HhccCCCCCEEeCCCCcccCC
Confidence 344444444445544444443
No 365
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.80 E-value=8e-21 Score=208.86 Aligned_cols=172 Identities=15% Similarity=0.175 Sum_probs=122.9
Q ss_pred CcccccccccccceeeecCCCcEEeeeccCCchh-----HHHHHhhhhHhHHHHHHhhhcCccc--cccccc--------
Q 047576 373 SKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPET-----EELAFIRSFRNEAQVLSQMERGSLF--RILHND-------- 437 (602)
Q Consensus 373 ~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~-----~~~~~~~~~~~E~~il~~l~~gsL~--~~l~~~-------- 437 (602)
..+.||+|+||.||+|+. .++.+++|+...... ......+++.+|++++..+.|+++. ......
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 356899999999999965 567788887543321 2222356789999999998888877 222111
Q ss_pred --cchhhhcH--HHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCC-------c
Q 047576 438 --AEAVELDW--AKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSN-------Q 506 (602)
Q Consensus 438 --~~~~~l~~--~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~-------~ 506 (602)
.+...+.. ..+..++.|+++||+||| +++|+||||||+|||++. .+||+|||+++........ .
T Consensus 419 E~~~ggsL~~~l~~~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~ 493 (540)
T 3en9_A 419 SYINGKLAKDVIEDNLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFK 493 (540)
T ss_dssp ECCCSEEHHHHSTTCTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhh
Confidence 01111110 015689999999999999 789999999999999999 9999999999887542211 1
Q ss_pred ccccccccccccccccc--CcCCccchhHHHHHHHHHHHcCCCCCC
Q 047576 507 TLLAGSYGYIAPELAYT--MVMTEKYDVYSFGVVTLEVLMGKHPRD 550 (602)
Q Consensus 507 ~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltG~~Pf~ 550 (602)
....||+.|+|||++.. ..|+..+|+|+..+-..+.+.++.+|.
T Consensus 494 ~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 494 KAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred hhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 34579999999999987 567888999999999999998888764
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=6.5e-22 Score=218.70 Aligned_cols=191 Identities=18% Similarity=0.198 Sum_probs=162.8
Q ss_pred CCCCCCCCEEECcCCcCc------ccCCCcCEEECcCCc-------------CCCCCchhhhCCCCCCEEE-ecCCCCCC
Q 047576 151 ISALSKLQLLDLSSNRLR------GRLTNLNYMSLSRNM-------------LGGLLPQEIGNLKNLIELD-VGDNSLIG 210 (602)
Q Consensus 151 l~~L~~L~~L~Ls~N~i~------~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~ 210 (602)
+..+++|+.|+|++|+++ +.+++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+..
T Consensus 345 ~~~~~~L~~L~Ls~n~L~~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~ 424 (567)
T 1dce_A 345 SATDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD 424 (567)
T ss_dssp CSTTTTSSSCCCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred cccCccceeccCChhhHHhhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch
Confidence 367899999999999987 458899999998876 6788899999999999999 66665431
Q ss_pred CCcc------cccC--cCCCceeecccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCC
Q 047576 211 PIPL------TLSR--LTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSS 282 (602)
Q Consensus 211 ~~p~------~l~~--l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 282 (602)
++. .+.. ...|+.|+|++|+|+++|. ++++++|+.|+|++|+|+ .+|..++.+++|+.|+|++|+|++
T Consensus 425 -L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~- 500 (567)
T 1dce_A 425 -LRSKFLLENSVLKMEYADVRVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN- 500 (567)
T ss_dssp -HHHHHHHHHHHHHHHHTTCSEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-
T ss_pred -hhhhhhhcccccccCccCceEEEecCCCCCCCcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-
Confidence 111 1111 1368999999999999997 999999999999999999 889999999999999999999997
Q ss_pred CchhhhCCCCCCEEeccCCCCCCCC-CcccCCCCCCCEEeCCCCCCCCCCCcc---cccccccccccc
Q 047576 283 IPNELTRLTQLFHLDLSSNKLSGKI-PSQIASMEDLTWLDLSNNNIKGSIPGE---ITKLSRLDYLNL 346 (602)
Q Consensus 283 ~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~---~~~l~~L~~L~l 346 (602)
+| .++.+++|+.|+|++|+|++.. |..++.+++|+.|+|++|++++.+|.. +..+++|+.|++
T Consensus 501 lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 501 VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 67 8999999999999999999887 999999999999999999999876543 334788888764
No 367
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.79 E-value=1.7e-19 Score=171.90 Aligned_cols=152 Identities=20% Similarity=0.273 Sum_probs=111.4
Q ss_pred CCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCC-CcccccCCCCCcEEE
Q 047576 171 LTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSG-LPQEIGNLKNLMLLD 249 (602)
Q Consensus 171 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~ 249 (602)
+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++ .|..++.+++|++|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 455566666666666 334 5777888888888888654 23467778888888888888887 667778888888888
Q ss_pred ccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCC
Q 047576 250 VGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKG 329 (602)
Q Consensus 250 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 329 (602)
+++|++++..|..++.+++|++|++++|.+.+.+| .+..+++|+.|++++|++++ ++ .+..+++|+.|++++|++.+
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 88888887777778888888888888887333455 67888888888888888875 33 67788888888888888764
No 368
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.79 E-value=4.9e-20 Score=209.81 Aligned_cols=176 Identities=23% Similarity=0.290 Sum_probs=124.6
Q ss_pred CCEEECcCCcCcccCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCc
Q 047576 157 LQLLDLSSNRLRGRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLP 236 (602)
Q Consensus 157 L~~L~Ls~N~i~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip 236 (602)
|+.++|+.|.|. .++++.|++. ..|..+..+++|+.|+|++|.+. .+|..++++++|++|+|++|.|+.+|
T Consensus 193 l~~l~Ls~~~i~-------~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~~lp 263 (727)
T 4b8c_D 193 LQHKKLSQYSID-------EDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLTELP 263 (727)
T ss_dssp -------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCSCCC
T ss_pred hhcCccCccccc-------Ccccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCcccC
Confidence 455556665543 3456666666 66888999999999999999998 68888889999999999999999999
Q ss_pred ccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCC
Q 047576 237 QEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMED 316 (602)
Q Consensus 237 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 316 (602)
..++++++|++|+|++|+|+ .+|..|+.+++|++|+|++|.|+ .+|..|+++++|+.|+|++|.|++.+|..+..+..
T Consensus 264 ~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~ 341 (727)
T 4b8c_D 264 AEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSV 341 (727)
T ss_dssp GGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHH
T ss_pred hhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcch
Confidence 99999999999999999999 78999999999999999999997 77888999999999999999999998888755432
Q ss_pred -CCEEeCCCCCCCCCCCcccccccccccccccCC
Q 047576 317 -LTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGN 349 (602)
Q Consensus 317 -L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 349 (602)
+..|+|++|.++|.+|..+ ..|+++.|
T Consensus 342 ~~~~l~l~~N~l~~~~p~~l------~~l~l~~n 369 (727)
T 4b8c_D 342 TGLIFYLRDNRPEIPLPHER------RFIEINTD 369 (727)
T ss_dssp HHHHHHHHHCCCCCCCCCC---------------
T ss_pred hhhHHhhccCcccCcCcccc------ceeEeecc
Confidence 2347899999999988754 45566666
No 369
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.77 E-value=1.6e-18 Score=164.57 Aligned_cols=131 Identities=24% Similarity=0.344 Sum_probs=87.4
Q ss_pred CEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcc--cccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCC
Q 047576 199 IELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQ--EIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSC 276 (602)
Q Consensus 199 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~--~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 276 (602)
+++++++|+++ .+|..+.. +|++|++++|+++++|. .++++++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45666666663 45554432 66666666666666543 266667777777777777766666677777777777777
Q ss_pred CcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCC
Q 047576 277 NQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIP 332 (602)
Q Consensus 277 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 332 (602)
|+|++..|..|..+++|++|+|++|+|++..|..+..+++|+.|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 77776666666777777777777777776667777777777777777777776543
No 370
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.77 E-value=1.5e-18 Score=164.79 Aligned_cols=132 Identities=23% Similarity=0.319 Sum_probs=124.2
Q ss_pred ceeecccccCCCCcccccCCCCCcEEEccCCCCCCCCCC-ccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCC
Q 047576 223 KILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPS-TLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSN 301 (602)
Q Consensus 223 ~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 301 (602)
+.+++++|+++.+|..+.. +|++|++++|++++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 7899999999999987764 999999999999987765 5899999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccC
Q 047576 302 KLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVP 356 (602)
Q Consensus 302 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 356 (602)
+|++..|..|..+++|+.|+|++|++++.+|..+..+++|+.|++++|++++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 9999888889999999999999999999999999999999999999999998766
No 371
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.73 E-value=5.4e-18 Score=157.01 Aligned_cols=130 Identities=24% Similarity=0.199 Sum_probs=60.5
Q ss_pred CCcCEEECcCCcCC-CCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCC-CcccccCCCCCcEEE
Q 047576 172 TNLNYMSLSRNMLG-GLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSG-LPQEIGNLKNLMLLD 249 (602)
Q Consensus 172 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~ 249 (602)
++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++ +|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 44555555555554 44444445555555555555555443 344445555555555555554 444444445555555
Q ss_pred ccCCCCCCCC-CCccCCCCCCccccCCCCcCCCCCc---hhhhCCCCCCEEeccCCCC
Q 047576 250 VGNNDIIGPI-PSTLGLFSDLSYLDLSCNQFNSSIP---NELTRLTQLFHLDLSSNKL 303 (602)
Q Consensus 250 L~~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l 303 (602)
+++|.+++.. +..+..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 5555544321 1334444444444444444443332 2344444444444444443
No 372
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.73 E-value=1e-17 Score=155.11 Aligned_cols=137 Identities=23% Similarity=0.263 Sum_probs=109.9
Q ss_pred CCCCCEEEecCCCCC-CCCcccccCcCCCceeecccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCcccc
Q 047576 195 LKNLIELDVGDNSLI-GPIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLD 273 (602)
Q Consensus 195 l~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 273 (602)
.++|++|+|++|+++ +.+|..+..+++|++|++++|.++++ ..++.+++|++|++++|++++.+|..+..+++|++|+
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 377888888888887 77888888888888888888888888 6778888888888888888877777777788888888
Q ss_pred CCCCcCCCCC-chhhhCCCCCCEEeccCCCCCCCCC---cccCCCCCCCEEeCCCCCCCCCCCc
Q 047576 274 LSCNQFNSSI-PNELTRLTQLFHLDLSSNKLSGKIP---SQIASMEDLTWLDLSNNNIKGSIPG 333 (602)
Q Consensus 274 L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~~~p~ 333 (602)
+++|.+++.. +..+..+++|+.|++++|++++..+ ..+..+++|+.|++++|.+. .+|.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 8888887643 2678888888888888888886554 47788888888888888876 3443
No 373
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.73 E-value=1.2e-18 Score=175.71 Aligned_cols=136 Identities=17% Similarity=0.146 Sum_probs=96.9
Q ss_pred ccCcccccccccccceeeecCCCcEEeeeccCCchhHHH---------------HHhhhhHhHHHHHHhhhcCccccccc
Q 047576 371 IDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEEL---------------AFIRSFRNEAQVLSQMERGSLFRILH 435 (602)
Q Consensus 371 f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~---------------~~~~~~~~E~~il~~l~~gsL~~~l~ 435 (602)
|.....||+|+||.||+|+..+|+.||+|+++....... .....+.+|+.++..+.+..+...+.
T Consensus 92 ~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~~~v~~~~~ 171 (282)
T 1zar_A 92 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA 171 (282)
T ss_dssp SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred EEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccCCCcCeEEe
Confidence 334489999999999999987899999999864322110 13456788998886665322222221
Q ss_pred cc--------cch---hhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCC
Q 047576 436 ND--------AEA---VELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSS 504 (602)
Q Consensus 436 ~~--------~~~---~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~ 504 (602)
.. .++ ..+.......++.|++.||+||| +.+|+||||||+|||++ ++.+||+|||+++..
T Consensus 172 ~~~~~lvmE~~~g~~L~~l~~~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~~----- 242 (282)
T 1zar_A 172 WEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVEV----- 242 (282)
T ss_dssp EETTEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-TTEEEECCCTTCEET-----
T ss_pred ccceEEEEEecCCCcHHHcchhhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-CCcEEEEECCCCeEC-----
Confidence 10 000 01222445679999999999999 78999999999999999 999999999998643
Q ss_pred Ccccccccccccccccccc
Q 047576 505 NQTLLAGSYGYIAPELAYT 523 (602)
Q Consensus 505 ~~~~~~gt~~y~aPE~~~~ 523 (602)
..++|||++.+
T Consensus 243 --------~~~~a~e~l~r 253 (282)
T 1zar_A 243 --------GEEGWREILER 253 (282)
T ss_dssp --------TSTTHHHHHHH
T ss_pred --------CCCCHHHHHHH
Confidence 34678888754
No 374
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.72 E-value=4.5e-17 Score=152.17 Aligned_cols=130 Identities=23% Similarity=0.254 Sum_probs=59.2
Q ss_pred eeecccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCC
Q 047576 224 ILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKL 303 (602)
Q Consensus 224 ~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 303 (602)
.+++++|+++.+|..+. ++|+.|++++|++++..+..+..+++|++|++++|++++..+..|..+++|+.|+|++|+|
T Consensus 11 ~l~~~~~~l~~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 88 (177)
T 2o6r_A 11 EIRCNSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKL 88 (177)
T ss_dssp EEECCSSCCSSCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEEecCCCCccCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCc
Confidence 34444444444443222 3444444444444443333444444444444444444443333344444444445544444
Q ss_pred CCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCcc
Q 047576 304 SGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRV 355 (602)
Q Consensus 304 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~ 355 (602)
++..+..+..+++|+.|++++|++++..+..+..+++|+.|++++|++++..
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 89 QSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 4444444444445555555555554433333444445555555555554433
No 375
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.71 E-value=5.6e-17 Score=154.00 Aligned_cols=128 Identities=24% Similarity=0.324 Sum_probs=92.5
Q ss_pred CEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCc
Q 047576 199 IELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQ 278 (602)
Q Consensus 199 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 278 (602)
+++++++|+++ .+|..+. ++|++|+|++|+++.+|..+.++++|+.|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 46677777766 4555442 56777777777777777777777777777777777777666777777777777777777
Q ss_pred CCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCC
Q 047576 279 FNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKG 329 (602)
Q Consensus 279 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 329 (602)
|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 777777677777777777777777776555567777777777777777764
No 376
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.71 E-value=9e-18 Score=152.24 Aligned_cols=127 Identities=25% Similarity=0.227 Sum_probs=92.1
Q ss_pred CCCcCEEECcCCcCC-CCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCC-CcccccCCCCCcEE
Q 047576 171 LTNLNYMSLSRNMLG-GLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSG-LPQEIGNLKNLMLL 248 (602)
Q Consensus 171 l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L 248 (602)
.++|++|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|++++|++++ +|..+.++++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 355666777777776 66777777888888888888887765 567777888888888888877 67666677778888
Q ss_pred EccCCCCCCC-CCCccCCCCCCccccCCCCcCCCCCc---hhhhCCCCCCEEecc
Q 047576 249 DVGNNDIIGP-IPSTLGLFSDLSYLDLSCNQFNSSIP---NELTRLTQLFHLDLS 299 (602)
Q Consensus 249 ~L~~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls 299 (602)
++++|.+++. .|..+..+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 8888877763 34666777777777777777776555 456677777777765
No 377
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.71 E-value=4e-17 Score=155.04 Aligned_cols=130 Identities=26% Similarity=0.380 Sum_probs=121.1
Q ss_pred ceeecccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCC
Q 047576 223 KILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNK 302 (602)
Q Consensus 223 ~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 302 (602)
+.+++++|+++.+|..+. ++|+.|+|++|+|+ .+|..|..+++|++|+|++|.|++..+..|.++++|++|+|++|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 689999999999998765 69999999999998 778899999999999999999999888899999999999999999
Q ss_pred CCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCcc
Q 047576 303 LSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRV 355 (602)
Q Consensus 303 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~ 355 (602)
|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|++...-
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 99988889999999999999999999877778999999999999999997643
No 378
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.69 E-value=3.2e-17 Score=148.55 Aligned_cols=126 Identities=24% Similarity=0.295 Sum_probs=75.4
Q ss_pred CCCceeecccccCC--CCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEe
Q 047576 220 TSLKILILAQNQLS--GLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLD 297 (602)
Q Consensus 220 ~~L~~L~L~~N~l~--~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 297 (602)
++|+.|++++|.++ .+|..+..+++|+.|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 44555555555555 2555555555555555555555544 4455566666666666666655665566666666666
Q ss_pred ccCCCCCCC-CCcccCCCCCCCEEeCCCCCCCCCCC---ccccccccccccccc
Q 047576 298 LSSNKLSGK-IPSQIASMEDLTWLDLSNNNIKGSIP---GEITKLSRLDYLNLS 347 (602)
Q Consensus 298 Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~l~ 347 (602)
+++|++++. .+..+..+++|+.|++++|.+++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666652 23556666667777777776665544 356666667666665
No 379
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.67 E-value=1.1e-18 Score=194.31 Aligned_cols=212 Identities=17% Similarity=0.144 Sum_probs=150.8
Q ss_pred CccccCCccCCCCCCCCEEECcCCcCc--------ccCCCcCEEECcCCcCC-CCCchhhhCCCCCCEEEec--------
Q 047576 142 GFTGSIPSEISALSKLQLLDLSSNRLR--------GRLTNLNYMSLSRNMLG-GLLPQEIGNLKNLIELDVG-------- 204 (602)
Q Consensus 142 ~~~~~ip~~l~~L~~L~~L~Ls~N~i~--------~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~-------- 204 (602)
...+.+|..+..+++|++|+|++|.++ +.+++|++|+|+ |.++ +.++..+..+++|++|+|+
T Consensus 280 ~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~ 358 (592)
T 3ogk_B 280 MGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGM 358 (592)
T ss_dssp CCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTT
T ss_pred cchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCcccccc
Confidence 345566777777888888888888765 347888888888 4443 3344445678888888888
Q ss_pred ---CCCCCCCCcc-cccCcCCCceeecccccCCC-CcccccC-CCCCcEEEcc----CCCCCCC-----CCCccCCCCCC
Q 047576 205 ---DNSLIGPIPL-TLSRLTSLKILILAQNQLSG-LPQEIGN-LKNLMLLDVG----NNDIIGP-----IPSTLGLFSDL 269 (602)
Q Consensus 205 ---~N~l~~~~p~-~l~~l~~L~~L~L~~N~l~~-ip~~~~~-l~~L~~L~L~----~N~l~~~-----~p~~l~~l~~L 269 (602)
.|.+++.... ...++++|++|+++.|++++ .+..++. +++|+.|+++ .|.+++. ++..+..+++|
T Consensus 359 ~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L 438 (592)
T 3ogk_B 359 EDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKL 438 (592)
T ss_dssp SSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTC
T ss_pred ccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCC
Confidence 3566543222 24457888888888888887 4555554 7888888886 6777763 33345668888
Q ss_pred ccccCCCC--cCCCCCchhhhC-CCCCCEEeccCCCCCCC-CCcccCCCCCCCEEeCCCCCCCCC-CCcccccccccccc
Q 047576 270 SYLDLSCN--QFNSSIPNELTR-LTQLFHLDLSSNKLSGK-IPSQIASMEDLTWLDLSNNNIKGS-IPGEITKLSRLDYL 344 (602)
Q Consensus 270 ~~L~L~~N--~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L 344 (602)
++|++++| .+++..+..++. +++|+.|+|++|++++. ++..+..+++|+.|++++|.+++. ++..+..+++|+.|
T Consensus 439 ~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 518 (592)
T 3ogk_B 439 RRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYL 518 (592)
T ss_dssp CEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEE
T ss_pred CEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCee
Confidence 88888753 366655555543 78899999999988763 445567788999999999988754 34445678889999
Q ss_pred cccCCcCCCc
Q 047576 345 NLSGNKLSGR 354 (602)
Q Consensus 345 ~l~~N~l~g~ 354 (602)
++++|++++.
T Consensus 519 ~ls~n~it~~ 528 (592)
T 3ogk_B 519 WVQGYRASMT 528 (592)
T ss_dssp EEESCBCCTT
T ss_pred ECcCCcCCHH
Confidence 9999988765
No 380
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=3.9e-16 Score=145.77 Aligned_cols=131 Identities=25% Similarity=0.308 Sum_probs=73.0
Q ss_pred CEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcc-cccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCC
Q 047576 199 IELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQ-EIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCN 277 (602)
Q Consensus 199 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 277 (602)
+.+++++|+++. +|..+ .++|+.|++++|+++++|. .++++++|++|++++|++++..+..+..+++|++|++++|
T Consensus 10 ~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 344445544442 33222 2455555555555555433 3455555555555555555444445555666666666666
Q ss_pred cCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCC
Q 047576 278 QFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIP 332 (602)
Q Consensus 278 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 332 (602)
++++..+..+..+++|++|+|++|+|++..+..+..+++|+.|++++|.+++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 6665555555666666666666666665544455666667777777776665443
No 381
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.66 E-value=4.5e-19 Score=169.12 Aligned_cols=115 Identities=23% Similarity=0.270 Sum_probs=75.8
Q ss_pred hhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCC
Q 047576 190 QEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDL 269 (602)
Q Consensus 190 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 269 (602)
..+..+++|++|+|++|++++ +| .+.++++|++|++++|+++.+|..+..+++|+.|++++|++++ +| .+..+++|
T Consensus 42 ~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L 117 (198)
T 1ds9_A 42 ATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNL 117 (198)
T ss_dssp HHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHS
T ss_pred HHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCC
Confidence 377777777777777777776 55 6777777777777777777777666666777777777777765 33 45556666
Q ss_pred ccccCCCCcCCCCCc-hhhhCCCCCCEEeccCCCCCCCCC
Q 047576 270 SYLDLSCNQFNSSIP-NELTRLTQLFHLDLSSNKLSGKIP 308 (602)
Q Consensus 270 ~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p 308 (602)
++|++++|++++..+ ..+..+++|++|++++|++++.+|
T Consensus 118 ~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred CEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 666666666654322 345566666666666666654444
No 382
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.65 E-value=3.7e-19 Score=169.75 Aligned_cols=157 Identities=26% Similarity=0.343 Sum_probs=136.6
Q ss_pred hhhCCCCCCEEEecCCCCCCCCcc------cccCcCCCceeecccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccC
Q 047576 191 EIGNLKNLIELDVGDNSLIGPIPL------TLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLG 264 (602)
Q Consensus 191 ~~~~l~~L~~L~L~~N~l~~~~p~------~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 264 (602)
.+....+++.++++.|.++|.+|. .+..+++|++|++++|+++++| .+.++++|+.|++++|+++ .+|..+.
T Consensus 13 ~~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 13 IFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCCC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcccc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 356677888888888888888776 8999999999999999999998 8999999999999999998 6788888
Q ss_pred CCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCC-cccCCCCCCCEEeCCCCCCCCCCCcc---------
Q 047576 265 LFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIP-SQIASMEDLTWLDLSNNNIKGSIPGE--------- 334 (602)
Q Consensus 265 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~--------- 334 (602)
.+++|++|++++|++++ +| .+..+++|++|+|++|++++..+ ..+..+++|+.|++++|.+++.+|..
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 168 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHH
Confidence 88999999999999987 45 68899999999999999986432 47899999999999999998876653
Q ss_pred -cccccccccccccCCcCCC
Q 047576 335 -ITKLSRLDYLNLSGNKLSG 353 (602)
Q Consensus 335 -~~~l~~L~~L~l~~N~l~g 353 (602)
+..+++|+.|+ +|+++.
T Consensus 169 ~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 169 VVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HHHHCSSCSEEC--CGGGTT
T ss_pred HHHhCCCcEEEC--CcccCH
Confidence 78899999886 676654
No 383
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.62 E-value=4.9e-16 Score=145.02 Aligned_cols=132 Identities=20% Similarity=0.228 Sum_probs=84.3
Q ss_pred ccCcCCCceeecccccCCCCcccccCCC-CCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCC
Q 047576 216 LSRLTSLKILILAQNQLSGLPQEIGNLK-NLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLF 294 (602)
Q Consensus 216 l~~l~~L~~L~L~~N~l~~ip~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 294 (602)
+.++++|+.|++++|+++.+|. +..+. +|+.|++++|.+++. ..+..+++|++|+|++|.+++..|..+..+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCCSCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCchhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 3445555556666665555543 33333 666666666666653 4566666677777777777655444456777777
Q ss_pred EEeccCCCCCCCCCc--ccCCCCCCCEEeCCCCCCCCCCCcc----cccccccccccccCCcCC
Q 047576 295 HLDLSSNKLSGKIPS--QIASMEDLTWLDLSNNNIKGSIPGE----ITKLSRLDYLNLSGNKLS 352 (602)
Q Consensus 295 ~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~l~~N~l~ 352 (602)
+|+|++|+|+ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.|++++|.+.
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 7777777775 3454 6677777777777777776 34443 777778888888777654
No 384
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.61 E-value=1.7e-17 Score=184.79 Aligned_cols=194 Identities=14% Similarity=0.054 Sum_probs=108.3
Q ss_pred CCCCCccchhccccCCccccCCccCCCC--CCCCEEECcCCc-Cc--------ccCCCcCEEECcCCcCCCC----Cchh
Q 047576 127 CFPNLESLRILAYYDGFTGSIPSEISAL--SKLQLLDLSSNR-LR--------GRLTNLNYMSLSRNMLGGL----LPQE 191 (602)
Q Consensus 127 ~l~~L~~L~l~~~~~~~~~~ip~~l~~L--~~L~~L~Ls~N~-i~--------~~l~~L~~L~L~~N~l~~~----~p~~ 191 (602)
.+++|+.|++. .+.+.+..+..++.+ ++|++|+|++|. +. ..+++|++|+|++|.+++. ++..
T Consensus 110 ~~~~L~~L~L~--~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~ 187 (592)
T 3ogk_B 110 NLRQLKSVHFR--RMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHEL 187 (592)
T ss_dssp HCTTCCEEEEE--SCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHH
T ss_pred hCCCCCeEEee--ccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHH
Confidence 45666666665 334444444444442 337777776665 22 1367777777777776655 3345
Q ss_pred hhCCCCCCEEEecCCCCCC----CCcccccCcCCCceeecccccCCCCcccccCCCCCcEEEccCCCCC---CCCCCccC
Q 047576 192 IGNLKNLIELDVGDNSLIG----PIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDII---GPIPSTLG 264 (602)
Q Consensus 192 ~~~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~---~~~p~~l~ 264 (602)
+.++++|++|+|++|.+++ .++..+.++++|+.|++++|.++++|..+.++++|+.|+++.+... +..+..+.
T Consensus 188 ~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~ 267 (592)
T 3ogk_B 188 AQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLV 267 (592)
T ss_dssp HHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCC
T ss_pred HhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHhh
Confidence 5566777777777777763 2333445667777777777777777666667777777777643222 22233444
Q ss_pred CCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCC-cccCCCCCCCEEeCC
Q 047576 265 LFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIP-SQIASMEDLTWLDLS 323 (602)
Q Consensus 265 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~ 323 (602)
.+++|+.|+++++. .+.+|..+..+++|++|+|++|.+++... ..+..+++|+.|+++
T Consensus 268 ~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~ 326 (592)
T 3ogk_B 268 FPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR 326 (592)
T ss_dssp CCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred ccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc
Confidence 55555555555432 22344455555555666665555443222 223445555555554
No 385
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.60 E-value=1e-15 Score=142.79 Aligned_cols=103 Identities=22% Similarity=0.326 Sum_probs=52.0
Q ss_pred CCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcccc-cCCCCCcEEEccCCCCCCCCCC--ccCCCCCCcccc
Q 047576 197 NLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEI-GNLKNLMLLDVGNNDIIGPIPS--TLGLFSDLSYLD 273 (602)
Q Consensus 197 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~~~-~~l~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~ 273 (602)
+|++|+|++|.+++. ..+..+++|++|+|++|+++++|+.+ ..+++|++|++++|+++ .+|. .+..+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 555555555555543 34555555555555555555544332 55555555555555553 2333 444455555555
Q ss_pred CCCCcCCCCCch----hhhCCCCCCEEeccCCCC
Q 047576 274 LSCNQFNSSIPN----ELTRLTQLFHLDLSSNKL 303 (602)
Q Consensus 274 L~~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l 303 (602)
+++|.++. +|. .+..+++|+.||+++|.+
T Consensus 120 l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 120 ILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CCSSGGGG-STTHHHHHHHHCTTCSEETTEECCH
T ss_pred ecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCH
Confidence 55555542 222 244455555555555443
No 386
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.58 E-value=1.9e-15 Score=155.77 Aligned_cols=201 Identities=15% Similarity=0.198 Sum_probs=121.9
Q ss_pred CCCCCEEECcCCcCc------ccCCCcCEEECcCCcCCCCCchhhhC--------CCCCCEEEecCCCCCCCCcccccCc
Q 047576 154 LSKLQLLDLSSNRLR------GRLTNLNYMSLSRNMLGGLLPQEIGN--------LKNLIELDVGDNSLIGPIPLTLSRL 219 (602)
Q Consensus 154 L~~L~~L~Ls~N~i~------~~l~~L~~L~L~~N~l~~~~p~~~~~--------l~~L~~L~L~~N~l~~~~p~~l~~l 219 (602)
+++|++|||++|+|. +.++.+..+.+..|.|. +..|.+ +++|+.|+|.+ +++...+.+|.++
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~---~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~ 123 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVP---AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGC 123 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEEC---TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccC---HHHhcccccccccccCCCcEEECCc-cccchhHHHhhcC
Confidence 778888888888877 12333444555555322 344555 66666666666 5555555566666
Q ss_pred CCCceeecccccCCCCc-ccccCCCCCcEEEccCCCC----CCCCCCcc-------------------------------
Q 047576 220 TSLKILILAQNQLSGLP-QEIGNLKNLMLLDVGNNDI----IGPIPSTL------------------------------- 263 (602)
Q Consensus 220 ~~L~~L~L~~N~l~~ip-~~~~~l~~L~~L~L~~N~l----~~~~p~~l------------------------------- 263 (602)
++|+.|++++|.++.|+ ..|.++.++..+.+..+.. .......|
T Consensus 124 ~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~ 203 (329)
T 3sb4_A 124 DNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRD 203 (329)
T ss_dssp TTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGG
T ss_pred cccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccc
Confidence 66666666666665543 3445444444444433111 00000000
Q ss_pred -------------------CCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCC-EEeCC
Q 047576 264 -------------------GLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLT-WLDLS 323 (602)
Q Consensus 264 -------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~L~ 323 (602)
..+++|+.|+|++|+++...+..|.++++|+.|+|.+| ++...+..|.++++|+ .+++.
T Consensus 204 ~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~ 282 (329)
T 3sb4_A 204 INFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELP 282 (329)
T ss_dssp CSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEEC
T ss_pred cceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEc
Confidence 02567777777777777666667777777777777777 6655566677777777 77777
Q ss_pred CCCCCCCCCcccccccccccccccCCcCCCccCCCCC
Q 047576 324 NNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVPYSNK 360 (602)
Q Consensus 324 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~ 360 (602)
+ +++...+..|.++++|+.+++++|.++..-+..+.
T Consensus 283 ~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~ 318 (329)
T 3sb4_A 283 A-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFG 318 (329)
T ss_dssp T-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTC
T ss_pred c-cceEEchhhhhCCccCCEEEeCCCccCccchhhhc
Confidence 6 66656667777777777777777777665555543
No 387
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.57 E-value=1e-14 Score=135.29 Aligned_cols=107 Identities=24% Similarity=0.279 Sum_probs=79.6
Q ss_pred CceeecccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCC
Q 047576 222 LKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSN 301 (602)
Q Consensus 222 L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 301 (602)
.+.+++++|+++.+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 11 ~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 4567777777777776553 67777777777777777777777777777777777777666666777777777777777
Q ss_pred CCCCCCCcccCCCCCCCEEeCCCCCCCCC
Q 047576 302 KLSGKIPSQIASMEDLTWLDLSNNNIKGS 330 (602)
Q Consensus 302 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 330 (602)
+|++..+..|..+++|+.|+|++|.+++.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 77766666677777777777777777754
No 388
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.57 E-value=1.3e-15 Score=156.86 Aligned_cols=222 Identities=15% Similarity=0.160 Sum_probs=145.1
Q ss_pred CCCCCEEECcCCcC-------cccCCCcCEEECcCCcCC--CCCchhhhCCCCCCEEEecCCCCCCCCcccccC------
Q 047576 154 LSKLQLLDLSSNRL-------RGRLTNLNYMSLSRNMLG--GLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSR------ 218 (602)
Q Consensus 154 L~~L~~L~Ls~N~i-------~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~------ 218 (602)
+.+|+.|.++++-- ...+++|++|||++|+|. ...+..+ +.++.+.+..|.+ .+..|.+
T Consensus 24 ~~~l~~L~l~g~i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~~ 97 (329)
T 3sb4_A 24 ANSITHLTLTGKLNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGVT 97 (329)
T ss_dssp HHHCSEEEEEEEECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTEE
T ss_pred hCceeEEEEeccccHHHHHHHHHhhccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhcccccccc
Confidence 56788888876521 123788888888888887 2222222 2355666666643 2245566
Q ss_pred --cCCCceeecccccCCCCcc-cccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcC----CC----------
Q 047576 219 --LTSLKILILAQNQLSGLPQ-EIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQF----NS---------- 281 (602)
Q Consensus 219 --l~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l----~~---------- 281 (602)
+++|+.|+|.+ +++.|++ +|.++++|+.|++++|.++...+..|....++..+.+..+.. ..
T Consensus 98 ~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~ 176 (329)
T 3sb4_A 98 KGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGE 176 (329)
T ss_dssp EECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESC
T ss_pred cccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccc
Confidence 88999999988 8888654 688888999999999888877777888777777776655221 00
Q ss_pred ------------CCchh---------------------------h-hCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEe
Q 047576 282 ------------SIPNE---------------------------L-TRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLD 321 (602)
Q Consensus 282 ------------~~p~~---------------------------~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 321 (602)
.++.. + ..+++|+.|+|++|+++...+..|.++++|+.|+
T Consensus 177 ~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~ 256 (329)
T 3sb4_A 177 PLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIK 256 (329)
T ss_dssp CCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEE
T ss_pred ccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEE
Confidence 00000 0 1267888999998888866666788888999999
Q ss_pred CCCCCCCCCCCcccccccccc-cccccCCcCCCccCCCCCcCCCCCCCc-cccCccccccccccc
Q 047576 322 LSNNNIKGSIPGEITKLSRLD-YLNLSGNKLSGRVPYSNKHLSSMPTPR-KIDSKYCIGTGAYGS 384 (602)
Q Consensus 322 L~~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~g~~p~~~~~l~~lp~t~-~f~~~~~LG~G~~g~ 384 (602)
|.+| ++...+..|.++++|+ .+++.+ .++..-+..+.....+.... .-.....|+.++|..
T Consensus 257 l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~ 319 (329)
T 3sb4_A 257 LPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGN 319 (329)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCT
T ss_pred CCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcC
Confidence 9887 7767777888888888 888887 56554455554333332111 012234566666654
No 389
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.55 E-value=2.5e-14 Score=133.28 Aligned_cols=106 Identities=24% Similarity=0.294 Sum_probs=78.3
Q ss_pred ceeecccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCC
Q 047576 223 KILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNK 302 (602)
Q Consensus 223 ~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 302 (602)
+.+++++|+++.+|..+. ++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 15 ~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp SEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred cEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 567777777777776654 677777777777777777777777777777777777776655566777778888888887
Q ss_pred CCCCCCcccCCCCCCCEEeCCCCCCCCC
Q 047576 303 LSGKIPSQIASMEDLTWLDLSNNNIKGS 330 (602)
Q Consensus 303 l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 330 (602)
|++..+..|..+++|+.|+|++|.+...
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred cceeCHHHhccccCCCEEEeCCCCcccc
Confidence 7765555677777777888877777743
No 390
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.55 E-value=4.2e-15 Score=147.74 Aligned_cols=125 Identities=21% Similarity=0.262 Sum_probs=88.3
Q ss_pred ccCcccccccccccceeeec-CCCcE--EeeeccCCchhH---------------------HHHHhhhhHhHHHHHHhhh
Q 047576 371 IDSKYCIGTGAYGSVYKAQL-PNGRV--FALKKLNSPETE---------------------ELAFIRSFRNEAQVLSQME 426 (602)
Q Consensus 371 f~~~~~LG~G~~g~Vy~~~~-~~g~~--vavK~l~~~~~~---------------------~~~~~~~~~~E~~il~~l~ 426 (602)
|.....||+|+||.||+|+. .+|+. ||||+++..... .......+.+|+.++..+.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45567899999999999987 68989 999987543211 0011235778888887665
Q ss_pred cCcc-----c---------ccccccc----c--h--hhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCC
Q 047576 427 RGSL-----F---------RILHNDA----E--A--VELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNS 484 (602)
Q Consensus 427 ~gsL-----~---------~~l~~~~----~--~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~ 484 (602)
+..+ . +++...+ . . ...++.++..++.|++.|+.|||. +.+|+||||||+|||++.
T Consensus 129 ~~~i~~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlkp~NILl~~ 206 (258)
T 1zth_A 129 EAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQ--EAELVHADLSEYNIMYID 206 (258)
T ss_dssp HTTCCCCCEEEEETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCSTTSEEESS
T ss_pred hCCCCCCeEEEcCCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCCHHHEEEcC
Confidence 4321 1 1121000 0 0 012244678899999999999994 459999999999999998
Q ss_pred CCcceeecccccccc
Q 047576 485 KLEAFVADFGTARLL 499 (602)
Q Consensus 485 ~~~~kL~DFG~a~~~ 499 (602)
.++|+|||+|...
T Consensus 207 --~~~liDFG~a~~~ 219 (258)
T 1zth_A 207 --KVYFIDMGQAVTL 219 (258)
T ss_dssp --SEEECCCTTCEET
T ss_pred --cEEEEECcccccC
Confidence 9999999999765
No 391
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.53 E-value=3.3e-14 Score=131.84 Aligned_cols=110 Identities=25% Similarity=0.307 Sum_probs=100.5
Q ss_pred CCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCC
Q 047576 244 NLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLS 323 (602)
Q Consensus 244 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 323 (602)
+.+.+++++|+++. +|..+ .++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 10 ~~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 45789999999985 77665 3899999999999999999999999999999999999998888888999999999999
Q ss_pred CCCCCCCCCcccccccccccccccCCcCCCccC
Q 047576 324 NNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVP 356 (602)
Q Consensus 324 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 356 (602)
+|+|++..+..|..+++|+.|+|++|++++..+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 999998888889999999999999999988654
No 392
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.53 E-value=8.6e-17 Score=178.98 Aligned_cols=207 Identities=17% Similarity=0.138 Sum_probs=149.6
Q ss_pred ccCCccCCCCCCCCEEECcCCcCcc--------cCCCcCEEECcCCcCCCC-CchhhhCCCCCCEEEec---------CC
Q 047576 145 GSIPSEISALSKLQLLDLSSNRLRG--------RLTNLNYMSLSRNMLGGL-LPQEIGNLKNLIELDVG---------DN 206 (602)
Q Consensus 145 ~~ip~~l~~L~~L~~L~Ls~N~i~~--------~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~---------~N 206 (602)
+.+|..+..+++|++|+|++|.+++ .+++|++|+|++| ++.. ++.....+++|++|+|+ .|
T Consensus 279 ~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~ 357 (594)
T 2p1m_B 279 AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNV 357 (594)
T ss_dssp GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSS
T ss_pred hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCC
Confidence 3455555578899999999998763 5789999999988 4422 22333458999999983 35
Q ss_pred CCCCCCccccc-CcCCCceeecccccCCC-Cccccc-CCCCCcEEEcc--C----CCCCCC-----CCCccCCCCCCccc
Q 047576 207 SLIGPIPLTLS-RLTSLKILILAQNQLSG-LPQEIG-NLKNLMLLDVG--N----NDIIGP-----IPSTLGLFSDLSYL 272 (602)
Q Consensus 207 ~l~~~~p~~l~-~l~~L~~L~L~~N~l~~-ip~~~~-~l~~L~~L~L~--~----N~l~~~-----~p~~l~~l~~L~~L 272 (602)
.+++.....+. ++++|+.|.++.|++++ .+..+. ++++|+.|+++ + |.+++. ++..+..+++|+.|
T Consensus 358 ~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L 437 (594)
T 2p1m_B 358 ALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRL 437 (594)
T ss_dssp CCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEE
T ss_pred CCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEE
Confidence 55543333333 47899999998899887 344444 58899999999 4 556532 11225667899999
Q ss_pred cCCCCcCCCCCchhhhC-CCCCCEEeccCCCCCCCCCccc-CCCCCCCEEeCCCCCCCCCCCc-ccccccccccccccCC
Q 047576 273 DLSCNQFNSSIPNELTR-LTQLFHLDLSSNKLSGKIPSQI-ASMEDLTWLDLSNNNIKGSIPG-EITKLSRLDYLNLSGN 349 (602)
Q Consensus 273 ~L~~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~l~~N 349 (602)
++++ .+++..+..++. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++.... .+..+++|+.|++++|
T Consensus 438 ~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~ 516 (594)
T 2p1m_B 438 SLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSC 516 (594)
T ss_dssp ECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESS
T ss_pred eecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCC
Confidence 9977 777666666665 8899999999999876555444 6689999999999999654443 4456889999999999
Q ss_pred cCCC
Q 047576 350 KLSG 353 (602)
Q Consensus 350 ~l~g 353 (602)
+++.
T Consensus 517 ~~~~ 520 (594)
T 2p1m_B 517 SVSF 520 (594)
T ss_dssp CCBH
T ss_pred CCCH
Confidence 8854
No 393
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.50 E-value=9.2e-14 Score=129.38 Aligned_cols=108 Identities=26% Similarity=0.330 Sum_probs=98.1
Q ss_pred CcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCC
Q 047576 245 LMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSN 324 (602)
Q Consensus 245 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 324 (602)
-+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 478999999996 6777664 8999999999999999999999999999999999999987777789999999999999
Q ss_pred CCCCCCCCcccccccccccccccCCcCCCcc
Q 047576 325 NNIKGSIPGEITKLSRLDYLNLSGNKLSGRV 355 (602)
Q Consensus 325 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~ 355 (602)
|+|++..+..+..+++|+.|++++|++...-
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 9999877777999999999999999998654
No 394
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.48 E-value=1.1e-15 Score=169.88 Aligned_cols=123 Identities=20% Similarity=0.206 Sum_probs=67.0
Q ss_pred CCCCCccchhccccCCccccCCccCC-CCCCCCEEECcCC-cCcc--------cCCCcCEEECcCCcCCCCCchhhh---
Q 047576 127 CFPNLESLRILAYYDGFTGSIPSEIS-ALSKLQLLDLSSN-RLRG--------RLTNLNYMSLSRNMLGGLLPQEIG--- 193 (602)
Q Consensus 127 ~l~~L~~L~l~~~~~~~~~~ip~~l~-~L~~L~~L~Ls~N-~i~~--------~l~~L~~L~L~~N~l~~~~p~~~~--- 193 (602)
.+++|+.|++. .+.+.+..+..+. .+++|++|+|++| .++. .+++|++|+|++|.+++..+..+.
T Consensus 103 ~~~~L~~L~L~--~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~ 180 (594)
T 2p1m_B 103 SYTWLEEIRLK--RMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFP 180 (594)
T ss_dssp HCTTCCEEEEE--SCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSC
T ss_pred hCCCCCeEEee--CcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHh
Confidence 45566666665 3344444444443 4667777777666 3332 366677777777766655444443
Q ss_pred -CCCCCCEEEecCCCCCCCCccc----ccCcCCCceeecccc-cCCCCcccccCCCCCcEEEccC
Q 047576 194 -NLKNLIELDVGDNSLIGPIPLT----LSRLTSLKILILAQN-QLSGLPQEIGNLKNLMLLDVGN 252 (602)
Q Consensus 194 -~l~~L~~L~L~~N~l~~~~p~~----l~~l~~L~~L~L~~N-~l~~ip~~~~~l~~L~~L~L~~ 252 (602)
.+++|++|+|++|. ....+.. +.++++|++|++++| .++++|..+.++++|+.|+++.
T Consensus 181 ~~~~~L~~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~ 244 (594)
T 2p1m_B 181 DTYTSLVSLNISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGG 244 (594)
T ss_dssp TTCCCCCEEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSB
T ss_pred hcCCcCcEEEecccC-CcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEccccc
Confidence 44567777776665 1111111 233466666766666 3333555555556666665443
No 395
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.44 E-value=9.9e-13 Score=138.97 Aligned_cols=233 Identities=13% Similarity=0.116 Sum_probs=177.2
Q ss_pred CCcccccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCc-------ccCCCcCEEECcCCcCCCCC
Q 047576 116 FNGRLSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLR-------GRLTNLNYMSLSRNMLGGLL 188 (602)
Q Consensus 116 ~~~~l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~-------~~l~~L~~L~L~~N~l~~~~ 188 (602)
+...+..+.-..|.+. .|....+.+++...-..+|.+ .+|+.++|.+ .+. ..+++|+.++|++|+++.+.
T Consensus 120 ip~~i~~I~~~aF~~~-~L~~i~l~~~i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~ 196 (401)
T 4fdw_A 120 LPNSVKSIPKDAFRNS-QIAKVVLNEGLKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLP 196 (401)
T ss_dssp CCTTCCEECTTTTTTC-CCSEEECCTTCCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEEC
T ss_pred ECCccCEehHhhcccC-CccEEEeCCCccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEec
Confidence 3445555555555542 344444456655444567777 4799999986 443 24789999999999999877
Q ss_pred chhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcc-cccCCCCCcEEEccCCCCCCCCCCccCCCC
Q 047576 189 PQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQ-EIGNLKNLMLLDVGNNDIIGPIPSTLGLFS 267 (602)
Q Consensus 189 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 267 (602)
...|. .++|+.+.|..| ++.....+|.++++|+.+++.+| ++.|+. .|.+ .+|+.+.+. |.++...+..|.+++
T Consensus 197 ~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~ 271 (401)
T 4fdw_A 197 ASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCP 271 (401)
T ss_dssp TTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCT
T ss_pred hhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCC
Confidence 77777 589999999854 77667778999999999999875 666654 5555 789999994 557766678899999
Q ss_pred CCccccCCCCcCC-----CCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccc
Q 047576 268 DLSYLDLSCNQFN-----SSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLD 342 (602)
Q Consensus 268 ~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 342 (602)
+|+.+++.+|.+. ...+..|.++++|+.++|. |.++......|.++++|+.++|.+| ++...+..|.++ +|+
T Consensus 272 ~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~ 348 (401)
T 4fdw_A 272 ELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIK 348 (401)
T ss_dssp TCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCC
T ss_pred CCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCC
Confidence 9999999988875 3556789999999999999 4577666778999999999999655 776667889998 999
Q ss_pred cccccCCcCCCccCCCC
Q 047576 343 YLNLSGNKLSGRVPYSN 359 (602)
Q Consensus 343 ~L~l~~N~l~g~~p~~~ 359 (602)
.+++++|.+....+..+
T Consensus 349 ~l~l~~n~~~~l~~~~F 365 (401)
T 4fdw_A 349 EVKVEGTTPPQVFEKVW 365 (401)
T ss_dssp EEEECCSSCCBCCCSSC
T ss_pred EEEEcCCCCcccccccc
Confidence 99999997765444443
No 396
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.43 E-value=1.8e-12 Score=136.90 Aligned_cols=218 Identities=11% Similarity=0.099 Sum_probs=169.2
Q ss_pred CCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCcc----c--CCCcCEEECcCCcCCCCCchhhhCCCCCCEEE
Q 047576 129 PNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLRG----R--LTNLNYMSLSRNMLGGLLPQEIGNLKNLIELD 202 (602)
Q Consensus 129 ~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~~----~--l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 202 (602)
..++.+.+ .+++...-..+|.+. +|+.++|.+| +.. . -.+|+.+.|.+ .++.+.+.+|.++++|+.++
T Consensus 113 ~~l~~i~i---p~~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 113 KGYNEIIL---PNSVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNSTVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp SSCSEEEC---CTTCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTCCCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred CCccEEEE---CCccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCCCceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 44454443 455555445678875 7999999877 431 0 24799999986 78878888999999999999
Q ss_pred ecCCCCCCCCcccccCcCCCceeecccccCCCCc-ccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCC
Q 047576 203 VGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLP-QEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNS 281 (602)
Q Consensus 203 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 281 (602)
|++|+++......|. .++|+.+.+.+| ++.|+ ..|.++++|+.+++.+| ++......|.+ .+|+.+.+ .|.++.
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~ 261 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTN 261 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCE
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccE
Confidence 999999865555666 689999999854 77764 47889999999999976 66556667777 78999999 566777
Q ss_pred CCchhhhCCCCCCEEeccCCCCC-----CCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCCCccC
Q 047576 282 SIPNELTRLTQLFHLDLSSNKLS-----GKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLSGRVP 356 (602)
Q Consensus 282 ~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 356 (602)
..+.+|.++++|+.+++.+|.+. ...+..|.++++|+.++|. |.++......|.++++|+.+.+..| ++..-+
T Consensus 262 I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~ 339 (401)
T 4fdw_A 262 IASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINF 339 (401)
T ss_dssp ECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECT
T ss_pred EChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcH
Confidence 77889999999999999998875 3456789999999999999 5587677788999999999999665 543333
Q ss_pred CCC
Q 047576 357 YSN 359 (602)
Q Consensus 357 ~~~ 359 (602)
..+
T Consensus 340 ~aF 342 (401)
T 4fdw_A 340 SAF 342 (401)
T ss_dssp TSS
T ss_pred HhC
Confidence 333
No 397
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.43 E-value=3.4e-13 Score=139.71 Aligned_cols=103 Identities=21% Similarity=0.207 Sum_probs=54.4
Q ss_pred eecccc-cCCCCcccccCCCCCcEEEccC-CCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCC
Q 047576 225 LILAQN-QLSGLPQEIGNLKNLMLLDVGN-NDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNK 302 (602)
Q Consensus 225 L~L~~N-~l~~ip~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 302 (602)
++++++ +|++||. ++.+++|+.|+|++ |+|++..|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+
T Consensus 13 v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 91 (347)
T 2ifg_A 13 LRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (347)
T ss_dssp EECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCc
Confidence 344444 5555555 55555555555553 55555444555555555555555555555555555555555555555555
Q ss_pred CCCCCCcccCCCCCCCEEeCCCCCCCC
Q 047576 303 LSGKIPSQIASMEDLTWLDLSNNNIKG 329 (602)
Q Consensus 303 l~~~~p~~~~~l~~L~~L~L~~N~l~~ 329 (602)
|++..+..+..++ |+.|+|++|.+..
T Consensus 92 l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 92 LESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred cceeCHHHcccCC-ceEEEeeCCCccC
Confidence 5544444444443 5555555555553
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.43 E-value=1.8e-15 Score=158.50 Aligned_cols=164 Identities=16% Similarity=0.158 Sum_probs=82.6
Q ss_pred CCcCEEECcCCcCCCCCchhhhCC-----CCCCEEEecCCCCCCCCcccc-cCcCCCceeecccccCCCC-cccc-----
Q 047576 172 TNLNYMSLSRNMLGGLLPQEIGNL-----KNLIELDVGDNSLIGPIPLTL-SRLTSLKILILAQNQLSGL-PQEI----- 239 (602)
Q Consensus 172 ~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~l-~~l~~L~~L~L~~N~l~~i-p~~~----- 239 (602)
++|++|+|++|.|+......+... ++|++|+|++|.++......+ ..+++|+.|+|++|+++.. ...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 344444444555443333333222 456666666665543222222 2345566666666665541 1111
Q ss_pred cCCCCCcEEEccCCCCCCC----CCCccCCCCCCccccCCCCcCCCC----CchhhhCCCCCCEEeccCCCCCCC----C
Q 047576 240 GNLKNLMLLDVGNNDIIGP----IPSTLGLFSDLSYLDLSCNQFNSS----IPNELTRLTQLFHLDLSSNKLSGK----I 307 (602)
Q Consensus 240 ~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~ 307 (602)
...++|+.|+|++|.|+.. ++..+...++|++|+|++|.|++. ++..+...++|+.|+|++|.|++. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 1345566666666665431 222334455566666666666532 234455566677777777776542 2
Q ss_pred CcccCCCCCCCEEeCCCCCCCCCCCccc
Q 047576 308 PSQIASMEDLTWLDLSNNNIKGSIPGEI 335 (602)
Q Consensus 308 p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 335 (602)
+..+...++|+.|+|++|.|++.....+
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred HHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 2233445667777777777665433333
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.42 E-value=5.9e-15 Score=154.54 Aligned_cols=160 Identities=19% Similarity=0.158 Sum_probs=126.0
Q ss_pred CCCCCEEECcCCcCcc------------cCCCcCEEECcCCcCCCCCchhh-hCCCCCCEEEecCCCCCCCCcccc----
Q 047576 154 LSKLQLLDLSSNRLRG------------RLTNLNYMSLSRNMLGGLLPQEI-GNLKNLIELDVGDNSLIGPIPLTL---- 216 (602)
Q Consensus 154 L~~L~~L~Ls~N~i~~------------~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~l---- 216 (602)
+++|++|+|++|.|+. ..++|++|+|++|.|+......+ ..+++|++|+|++|.|+......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 4679999999999973 23699999999999986544443 346789999999999976544444
Q ss_pred -cCcCCCceeecccccCCC-----CcccccCCCCCcEEEccCCCCCCC----CCCccCCCCCCccccCCCCcCCCC----
Q 047576 217 -SRLTSLKILILAQNQLSG-----LPQEIGNLKNLMLLDVGNNDIIGP----IPSTLGLFSDLSYLDLSCNQFNSS---- 282 (602)
Q Consensus 217 -~~l~~L~~L~L~~N~l~~-----ip~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~---- 282 (602)
...++|++|+|++|.++. ++..+..+++|++|+|++|.|+.. ++..+...++|++|+|++|.|+..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 346889999999999976 455667889999999999999753 245567788999999999999864
Q ss_pred CchhhhCCCCCCEEeccCCCCCCCCCcccCC
Q 047576 283 IPNELTRLTQLFHLDLSSNKLSGKIPSQIAS 313 (602)
Q Consensus 283 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 313 (602)
++..+...++|++|+|++|.|++.....+..
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 3445666799999999999998655444433
No 400
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.38 E-value=2.3e-13 Score=141.36 Aligned_cols=117 Identities=12% Similarity=0.122 Sum_probs=81.5
Q ss_pred ccCcccccccccccceeeecCCCcEEeeeccCCchhH------------------HHH-HhhhhHhHHHHHHh-------
Q 047576 371 IDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETE------------------ELA-FIRSFRNEAQVLSQ------- 424 (602)
Q Consensus 371 f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~------------------~~~-~~~~~~~E~~il~~------- 424 (602)
|.....||+|++|.||+|..++|+.||||+++..... ... ......+|...+..
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 6778899999999999999999999999987532110 000 00112334444422
Q ss_pred ----------------hhcCccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCc-
Q 047576 425 ----------------MERGSLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLE- 487 (602)
Q Consensus 425 ----------------l~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~- 487 (602)
++++.+.++. +......++.|++.++.||| +.|||||||||.|||+++++.
T Consensus 177 vp~p~~~~~~~LVME~i~G~~L~~l~---------~~~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dgd~ 244 (397)
T 4gyi_A 177 VPEPIAQSRHTIVMSLVDALPMRQVS---------SVPDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREEKDA 244 (397)
T ss_dssp CCCEEEEETTEEEEECCSCEEGGGCC---------CCSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEECS
T ss_pred CCeeeeccCceEEEEecCCccHhhhc---------ccHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCCCc
Confidence 2222222221 22334568899999999999 779999999999999988763
Q ss_pred ---------ceeecccccccc
Q 047576 488 ---------AFVADFGTARLL 499 (602)
Q Consensus 488 ---------~kL~DFG~a~~~ 499 (602)
+.|+||+-+...
T Consensus 245 ~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 245 EDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SCTTSEEEEEEECCCTTCEET
T ss_pred ccccccccceEEEEeCCcccC
Confidence 789999977654
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.34 E-value=1.6e-12 Score=134.63 Aligned_cols=103 Identities=23% Similarity=0.202 Sum_probs=73.5
Q ss_pred EEECcCC-cCCCCCchhhhCCCCCCEEEecC-CCCCCCCcccccCcCCCceeecccccCCCC-cccccCCCCCcEEEccC
Q 047576 176 YMSLSRN-MLGGLLPQEIGNLKNLIELDVGD-NSLIGPIPLTLSRLTSLKILILAQNQLSGL-PQEIGNLKNLMLLDVGN 252 (602)
Q Consensus 176 ~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~L~~N~l~~i-p~~~~~l~~L~~L~L~~ 252 (602)
.++++++ +|++ +|. |..+++|++|+|++ |+|++..|..|++|++|+.|+|++|+|+++ |..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3456665 6664 555 77777788888875 777777777777778888888888887774 44667777777888877
Q ss_pred CCCCCCCCCccCCCCCCccccCCCCcCCC
Q 047576 253 NDIIGPIPSTLGLFSDLSYLDLSCNQFNS 281 (602)
Q Consensus 253 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 281 (602)
|+|++..+..+..++ |+.|+|.+|.|..
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 777766555555555 7777777777764
No 402
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.98 E-value=7.4e-11 Score=122.54 Aligned_cols=78 Identities=17% Similarity=0.112 Sum_probs=45.2
Q ss_pred CCCcCEEECcCCcCC---------CCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCC-Cccccc
Q 047576 171 LTNLNYMSLSRNMLG---------GLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSG-LPQEIG 240 (602)
Q Consensus 171 l~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-ip~~~~ 240 (602)
+++|+.|.+..+... +.+...+..+++|+.|+|++|.-. .++. + .+++|+.|+|..|.++. ....++
T Consensus 138 l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~ 214 (362)
T 2ra8_A 138 FAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDIL 214 (362)
T ss_dssp HTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHH
T ss_pred cchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHH
Confidence 567777777654331 224455666777777777776311 1222 3 26777777777766654 222332
Q ss_pred --CCCCCcEEEcc
Q 047576 241 --NLKNLMLLDVG 251 (602)
Q Consensus 241 --~l~~L~~L~L~ 251 (602)
.+++|+.|+|+
T Consensus 215 ~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 215 GSDLPNLEKLVLY 227 (362)
T ss_dssp HSBCTTCCEEEEE
T ss_pred HccCCCCcEEEEe
Confidence 56777777764
No 403
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.98 E-value=1.2e-11 Score=122.44 Aligned_cols=18 Identities=6% Similarity=-0.285 Sum_probs=12.7
Q ss_pred CCCCCCceeCCCC-CEEEE
Q 047576 90 HCEWIGITCNSAG-SIIGL 107 (602)
Q Consensus 90 ~C~w~gv~C~~~~-~v~~l 107 (602)
.|+|.|+.|+..+ +|+.+
T Consensus 77 l~~~~g~i~~~~~~ki~~~ 95 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISII 95 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCE
T ss_pred HHhcCcEEECCCCCEEEEE
Confidence 5889999998654 44433
No 404
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.94 E-value=1.5e-10 Score=120.17 Aligned_cols=77 Identities=14% Similarity=0.121 Sum_probs=46.3
Q ss_pred ccCCCCCCCCEEECcCCcCc----------------ccCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCCCCCC
Q 047576 149 SEISALSKLQLLDLSSNRLR----------------GRLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSLIGPI 212 (602)
Q Consensus 149 ~~l~~L~~L~~L~Ls~N~i~----------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 212 (602)
.++..+++|+.|.+..+... ..+++|+.|+|++|.-. .++. + .+++|+.|+|..+.++...
T Consensus 133 ~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~ 209 (362)
T 2ra8_A 133 ENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSV 209 (362)
T ss_dssp TTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHH
T ss_pred HhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHH
Confidence 34556677777777654321 13577888888776311 1222 3 3778888888877765433
Q ss_pred ccccc--CcCCCceeecc
Q 047576 213 PLTLS--RLTSLKILILA 228 (602)
Q Consensus 213 p~~l~--~l~~L~~L~L~ 228 (602)
...+. .+++|+.|+|+
T Consensus 210 l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 210 VEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp HHHHHHSBCTTCCEEEEE
T ss_pred HHHHHHccCCCCcEEEEe
Confidence 33333 67788888775
No 405
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.63 E-value=2.4e-07 Score=97.40 Aligned_cols=213 Identities=15% Similarity=0.067 Sum_probs=135.2
Q ss_pred CCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCc------ccCCCcCEEECcCCcCCCCCchhhhCCCCC
Q 047576 125 FSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLR------GRLTNLNYMSLSRNMLGGLLPQEIGNLKNL 198 (602)
Q Consensus 125 ~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 198 (602)
|...++|+.+.+ .++....-..+|.++++|+.+++..|--. ..+..|+.+.+..+... +.......++|
T Consensus 158 F~~c~~L~~i~l---~~~~~~I~~~~F~~c~~L~~i~l~~~~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l 232 (394)
T 4fs7_A 158 FATCESLEYVSL---PDSMETLHNGLFSGCGKLKSIKLPRNLKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGV 232 (394)
T ss_dssp TTTCTTCCEEEC---CTTCCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCC
T ss_pred hcccCCCcEEec---CCccceeccccccCCCCceEEEcCCCceEeCchhhccccccceeecCCCceE--eehhhcccCCC
Confidence 444444444443 44544433456888888888888776211 23566777777665432 22334445678
Q ss_pred CEEEecCCCCCCCCcccccCcCCCceeecccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCc
Q 047576 199 IELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQ 278 (602)
Q Consensus 199 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 278 (602)
+.+.+..+ ++......+.+..+|+.+.+..+..+--...+.++..++.+....+.+. ...|..+.+|+.+.+..+
T Consensus 233 ~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~- 307 (394)
T 4fs7_A 233 KNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS- 307 (394)
T ss_dssp CEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-
T ss_pred ceEEECCC-ceecccccccccccceeEEcCCCcceeeccccccccccceeccCceeec---cccccccccccccccccc-
Confidence 88877643 3334445677778888888776644333445667777777777665432 235667777888777654
Q ss_pred CCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCC
Q 047576 279 FNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGN 349 (602)
Q Consensus 279 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 349 (602)
++.....+|.++++|+.++|..+ ++.....+|.++.+|+.+++..| ++.....+|.++++|+.+++..|
T Consensus 308 i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 308 VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 55555667777788888888644 55444567778888888888766 66555667778888888777654
No 406
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.61 E-value=1.7e-08 Score=94.58 Aligned_cols=110 Identities=15% Similarity=0.128 Sum_probs=62.9
Q ss_pred cCCccCCCCCCCCEEECcCC-cCcc-----------cCCCcCEEECcCCcCCCC----CchhhhCCCCCCEEEecCCCCC
Q 047576 146 SIPSEISALSKLQLLDLSSN-RLRG-----------RLTNLNYMSLSRNMLGGL----LPQEIGNLKNLIELDVGDNSLI 209 (602)
Q Consensus 146 ~ip~~l~~L~~L~~L~Ls~N-~i~~-----------~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 209 (602)
.+...+...+.|++|+|++| .|.. ..++|++|+|++|.|+.. +...+...++|++|+|++|.|.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34456777888888888888 7762 245677777777776542 2333444466666666666665
Q ss_pred CC----CcccccCcCCCceeec--ccccCCC-----CcccccCCCCCcEEEccCCCC
Q 047576 210 GP----IPLTLSRLTSLKILIL--AQNQLSG-----LPQEIGNLKNLMLLDVGNNDI 255 (602)
Q Consensus 210 ~~----~p~~l~~l~~L~~L~L--~~N~l~~-----ip~~~~~l~~L~~L~L~~N~l 255 (602)
.. +...+...++|++|+| ++|.++. +...+...++|++|+|++|.+
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 32 2333444455666666 5555553 222333345555555555544
No 407
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.60 E-value=2.9e-07 Score=96.71 Aligned_cols=221 Identities=14% Similarity=0.088 Sum_probs=156.9
Q ss_pred cccCCCCCCCCCccchhccccCCccccCCccCCCCCCCCEEECcCCcCc------ccCCCcCEEECcCCcCCCCCchhhh
Q 047576 120 LSHLNFSCFPNLESLRILAYYDGFTGSIPSEISALSKLQLLDLSSNRLR------GRLTNLNYMSLSRNMLGGLLPQEIG 193 (602)
Q Consensus 120 l~~~~~~~l~~L~~L~l~~~~~~~~~~ip~~l~~L~~L~~L~Ls~N~i~------~~l~~L~~L~L~~N~l~~~~p~~~~ 193 (602)
+..+....|.+...+... ...+....-..+|.++++|+.+.+.++-.. ..+.+|+.+++..| ++.+....|.
T Consensus 128 l~~i~~~aF~~~~~~~~~-~~~~~~~i~~~aF~~c~~L~~i~l~~~~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~ 205 (394)
T 4fs7_A 128 LKSIGVEAFKGCDFKEIT-IPEGVTVIGDEAFATCESLEYVSLPDSMETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFA 205 (394)
T ss_dssp CCEECTTTTTTCCCSEEE-CCTTCCEECTTTTTTCTTCCEEECCTTCCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTT
T ss_pred eeeecceeeecccccccc-cCccccccchhhhcccCCCcEEecCCccceeccccccCCCCceEEEcCCC-ceEeCchhhc
Confidence 333444455544433332 122222223457899999999999876432 24788999999876 6666678899
Q ss_pred CCCCCCEEEecCCCCCCCCcccccCcCCCceeecccccCCCC-cccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccc
Q 047576 194 NLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLSGL-PQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYL 272 (602)
Q Consensus 194 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~i-p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 272 (602)
++..|+.+.+..+... +........+|+.+.+..+ ++.+ ...+.++.+|+.+.+..+..+ .....|.....++.+
T Consensus 206 ~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~ 281 (394)
T 4fs7_A 206 ECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKV 281 (394)
T ss_dssp TCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEE
T ss_pred cccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eecccccccccccee
Confidence 9999999998877533 3334455678888888643 4444 345778899999999887554 556678888899988
Q ss_pred cCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcCC
Q 047576 273 DLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKLS 352 (602)
Q Consensus 273 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 352 (602)
....+.+. ...|..+.+|+.+.+..+ ++.....+|.++.+|+.+++.++ ++.....+|.++.+|+.+.+..| ++
T Consensus 282 ~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~ 355 (394)
T 4fs7_A 282 IYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR 355 (394)
T ss_dssp EECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC
T ss_pred ccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc
Confidence 88776542 346888899999999765 65555678999999999999754 77566788999999999998776 54
No 408
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.59 E-value=6.5e-09 Score=97.38 Aligned_cols=66 Identities=20% Similarity=0.159 Sum_probs=31.7
Q ss_pred hhhCCCCCCEEEecCC-CCCCC----CcccccCcCCCceeecccccCCC-----CcccccCCCCCcEEEccCCCCC
Q 047576 191 EIGNLKNLIELDVGDN-SLIGP----IPLTLSRLTSLKILILAQNQLSG-----LPQEIGNLKNLMLLDVGNNDII 256 (602)
Q Consensus 191 ~~~~l~~L~~L~L~~N-~l~~~----~p~~l~~l~~L~~L~L~~N~l~~-----ip~~~~~l~~L~~L~L~~N~l~ 256 (602)
.+...++|++|+|++| .+... +...+...++|++|+|++|+++. +...+...++|++|+|++|.|+
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 4444555666666655 54421 12233344555555555555543 2233334445555555555554
No 409
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.56 E-value=9.4e-09 Score=101.56 Aligned_cols=63 Identities=27% Similarity=0.412 Sum_probs=28.1
Q ss_pred CCCCCCEEEecCCCCCC--CCcccccCcCCCceeecccccCCCCcccccCCC--CCcEEEccCCCCCC
Q 047576 194 NLKNLIELDVGDNSLIG--PIPLTLSRLTSLKILILAQNQLSGLPQEIGNLK--NLMLLDVGNNDIIG 257 (602)
Q Consensus 194 ~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~--~L~~L~L~~N~l~~ 257 (602)
++++|++|+|++|+|++ .+|..+..+++|+.|+|++|+|+++. .+..++ +|++|+|++|.+.+
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~-~l~~l~~l~L~~L~L~~Npl~~ 234 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSER-ELDKIKGLKLEELWLDGNSLCD 234 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGG-GGGGGTTSCCSEEECTTSTTGG
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCch-hhhhcccCCcceEEccCCcCcc
Confidence 44555555555555554 22333444455555555555554431 122222 44444444444443
No 410
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.49 E-value=3.9e-06 Score=88.01 Aligned_cols=109 Identities=10% Similarity=0.164 Sum_probs=68.9
Q ss_pred ccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCC
Q 047576 239 IGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLT 318 (602)
Q Consensus 239 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 318 (602)
|.++++|+.+.+.++..+ .....|.++++|+.+.+. +.++......|.++.+|+.++|..+ ++.....+|.++.+|+
T Consensus 261 F~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~ 337 (394)
T 4gt6_A 261 FDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLE 337 (394)
T ss_dssp TTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred eeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCC
Confidence 455666777776554332 444566667777777775 4455455556777777777777654 4434455677777777
Q ss_pred EEeCCCCCCCCCCCcccccccccccccccCCcC
Q 047576 319 WLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKL 351 (602)
Q Consensus 319 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 351 (602)
.+.+..+ ++.....+|.++++|+.+++.+|..
T Consensus 338 ~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 338 RIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp EEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred EEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 7777543 5545556777777777777766643
No 411
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.45 E-value=1.7e-06 Score=90.78 Aligned_cols=131 Identities=14% Similarity=0.121 Sum_probs=93.3
Q ss_pred cccCcCCCceeecccccCCCCcccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCC
Q 047576 215 TLSRLTSLKILILAQNQLSGLPQEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLF 294 (602)
Q Consensus 215 ~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 294 (602)
+|.+.++|+.+.+.++..+--...|.++++|+.+.+. +.++......|.++++|+.+++..+ ++.....+|.++++|+
T Consensus 260 aF~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~ 337 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLE 337 (394)
T ss_dssp TTTTCSSCCEEECCTTCCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred eeeecccccEEecccccceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCC
Confidence 4667788888888655432223467889999999996 5566566678999999999999865 6666677899999999
Q ss_pred EEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccccccccccccCCcC
Q 047576 295 HLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKLSRLDYLNLSGNKL 351 (602)
Q Consensus 295 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 351 (602)
.+.|..+ ++.....+|.++++|+.+++.+|.... ..+.....|+.+.+..|.+
T Consensus 338 ~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 338 RIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp EEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred EEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 9999755 665556789999999999999876532 3566777888888776654
No 412
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.30 E-value=6.5e-07 Score=88.22 Aligned_cols=124 Identities=18% Similarity=0.160 Sum_probs=83.7
Q ss_pred cccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcC-ccccccc------------c
Q 047576 370 KIDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERG-SLFRILH------------N 436 (602)
Q Consensus 370 ~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~g-sL~~~l~------------~ 436 (602)
.|......+.|+.+.||++... ++.+++|+....... ....+.+|+.+++++..+ ..-+.+. +
T Consensus 15 ~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~---~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e 90 (263)
T 3tm0_A 15 KYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMS 90 (263)
T ss_dssp TSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred cceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCC---CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEE
Confidence 4656667788888999999864 678999998643211 124688899999887542 2222221 1
Q ss_pred ccchhhhc-----HHHHHHHHHHHHHHHHHhhhcC---------------------------------------------
Q 047576 437 DAEAVELD-----WAKRVNIVKAMAHALAYLHHDC--------------------------------------------- 466 (602)
Q Consensus 437 ~~~~~~l~-----~~~~~~i~~~ia~~L~~LH~~~--------------------------------------------- 466 (602)
..++..+. ......++.++++++..||...
T Consensus 91 ~i~G~~l~~~~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (263)
T 3tm0_A 91 EADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPREL 170 (263)
T ss_dssp CCSSEEHHHHCCTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHH
T ss_pred ecCCeehhhccCCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHH
Confidence 11111121 1234578899999999999610
Q ss_pred -----------CCCeEEeCCCCCCeeeCCCCcceeecccccc
Q 047576 467 -----------SPSVVHRDISSNNILLNSKLEAFVADFGTAR 497 (602)
Q Consensus 467 -----------~~~ivH~DLkp~NILld~~~~~kL~DFG~a~ 497 (602)
...++|+|++|.||+++++..+.|+||+.+.
T Consensus 171 ~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 171 YDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1458999999999999876666799998764
No 413
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.28 E-value=1.6e-05 Score=82.72 Aligned_cols=106 Identities=11% Similarity=0.065 Sum_probs=51.8
Q ss_pred ccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhhhCCCCCCEEeccCCCCCCCCCcccCCCCCCC
Q 047576 239 IGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKLSGKIPSQIASMEDLT 318 (602)
Q Consensus 239 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 318 (602)
+.++.+|+.+.+..+ ++......|.++.+|+.+.+..+ ++......|.++++|+.+.+.++.++......|.++.+|+
T Consensus 236 f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~ 313 (379)
T 4h09_A 236 FYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLS 313 (379)
T ss_dssp TTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCC
T ss_pred ccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCC
Confidence 344445555555443 33333344455555555555432 3333334455555555555555555543444555555555
Q ss_pred EEeCCCCCCCCCCCccccccccccccccc
Q 047576 319 WLDLSNNNIKGSIPGEITKLSRLDYLNLS 347 (602)
Q Consensus 319 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 347 (602)
.+.|..+ ++.....+|.++.+|+.+.+.
T Consensus 314 ~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 314 SVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp EEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred EEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 5555433 443334455555555555543
No 414
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.27 E-value=7.8e-07 Score=87.16 Aligned_cols=122 Identities=20% Similarity=0.147 Sum_probs=79.7
Q ss_pred ccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcCcc--ccccc------------c
Q 047576 371 IDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERGSL--FRILH------------N 436 (602)
Q Consensus 371 f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~gsL--~~~l~------------~ 436 (602)
+....+.+.|..+.||++...+|+.+++|...... ...+.+|+.+++++.+..+ -..+. +
T Consensus 22 ~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e 95 (264)
T 1nd4_A 22 YDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG 95 (264)
T ss_dssp CEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred CceEecccCCCCceEEEEecCCCCeEEEEeCCccc------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence 44333445666799999988778889999876531 2456778888877654322 11111 1
Q ss_pred ccchhhhcH--HHHHHHHHHHHHHHHHhhhcC------------------------------------------------
Q 047576 437 DAEAVELDW--AKRVNIVKAMAHALAYLHHDC------------------------------------------------ 466 (602)
Q Consensus 437 ~~~~~~l~~--~~~~~i~~~ia~~L~~LH~~~------------------------------------------------ 466 (602)
..++..++| .....++.++++.+..+|...
T Consensus 96 ~i~G~~l~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (264)
T 1nd4_A 96 EVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 175 (264)
T ss_dssp CCSSEETTTSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred ecCCcccCcCcCCHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence 111222221 123367888999999999531
Q ss_pred -------CCCeEEeCCCCCCeeeCCCCcceeeccccccc
Q 047576 467 -------SPSVVHRDISSNNILLNSKLEAFVADFGTARL 498 (602)
Q Consensus 467 -------~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~ 498 (602)
...++|+|++|.||+++++..+.|+|||.+..
T Consensus 176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 176 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11299999999999998876677999998753
No 415
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.22 E-value=2.7e-07 Score=93.37 Aligned_cols=165 Identities=21% Similarity=0.244 Sum_probs=101.7
Q ss_pred ccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhc-Ccc----------------ccc----
Q 047576 375 YCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER-GSL----------------FRI---- 433 (602)
Q Consensus 375 ~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~-gsL----------------~~~---- 433 (602)
..++.|....||++. ..+++|+.... .....+.+|..+++++.. ..+ ..+
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 447899999999985 45888986543 123567888988876632 111 011
Q ss_pred -ccccc----chhhhcHHHHHHHHHHHHHHHHHhhhcC------------------------------------------
Q 047576 434 -LHNDA----EAVELDWAKRVNIVKAMAHALAYLHHDC------------------------------------------ 466 (602)
Q Consensus 434 -l~~~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~------------------------------------------ 466 (602)
+.... ....++..++..++.++++.+..||...
T Consensus 97 ~i~G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 176 (304)
T 3sg8_A 97 KIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDF 176 (304)
T ss_dssp CCCCEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHH
T ss_pred ccCCeECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHH
Confidence 11100 0112455667788999999999999510
Q ss_pred -------------CCCeEEeCCCCCCeeeCC--CCcceeecccccccccCCCCCccc--------------ccccccccc
Q 047576 467 -------------SPSVVHRDISSNNILLNS--KLEAFVADFGTARLLHADSSNQTL--------------LAGSYGYIA 517 (602)
Q Consensus 467 -------------~~~ivH~DLkp~NILld~--~~~~kL~DFG~a~~~~~~~~~~~~--------------~~gt~~y~a 517 (602)
...++|+|++|.||++++ ...+.|+||+.+...+....-... .....++..
T Consensus 177 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~ 256 (304)
T 3sg8_A 177 YRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKD 256 (304)
T ss_dssp HHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSC
T ss_pred HHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCC
Confidence 135799999999999998 556789999988654321000000 000011111
Q ss_pred -ccccccCcCCccchhHHHHHHHHHHHcCCCCCC
Q 047576 518 -PELAYTMVMTEKYDVYSFGVVTLEVLMGKHPRD 550 (602)
Q Consensus 518 -PE~~~~~~~~~~~DvwSlGvil~elltG~~Pf~ 550 (602)
|+.... .....+.|++|.++|.+.+|..+|-
T Consensus 257 ~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 257 IPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred cHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 222111 1223689999999999999998863
No 416
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.15 E-value=3.6e-06 Score=87.05 Aligned_cols=122 Identities=16% Similarity=0.233 Sum_probs=80.7
Q ss_pred cccccccccccceeeecCCCcEEeeeccC--CchhHHHHHhhhhHhHHHHHHhhhcCcc---------------------
Q 047576 374 KYCIGTGAYGSVYKAQLPNGRVFALKKLN--SPETEELAFIRSFRNEAQVLSQMERGSL--------------------- 430 (602)
Q Consensus 374 ~~~LG~G~~g~Vy~~~~~~g~~vavK~l~--~~~~~~~~~~~~~~~E~~il~~l~~gsL--------------------- 430 (602)
...++.|.++.||+++..+ ..+++|+.. ..... .....+.+|..+++++....+
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~--~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLL--PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCC--CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 4567899999999998754 578888876 33211 123467789988877653111
Q ss_pred cccccccc----chhhhcHHHHHHHHHHHHHHHHHhhhcC----------------------------------------
Q 047576 431 FRILHNDA----EAVELDWAKRVNIVKAMAHALAYLHHDC---------------------------------------- 466 (602)
Q Consensus 431 ~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~---------------------------------------- 466 (602)
.+++.... ....++..++..++.++++.|..||...
T Consensus 120 me~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (359)
T 3dxp_A 120 MEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDS 199 (359)
T ss_dssp EECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHH
T ss_pred EEecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHH
Confidence 11111100 0112457788889999999999999621
Q ss_pred ---------------CCCeEEeCCCCCCeeeCCCCc--ceeeccccccc
Q 047576 467 ---------------SPSVVHRDISSNNILLNSKLE--AFVADFGTARL 498 (602)
Q Consensus 467 ---------------~~~ivH~DLkp~NILld~~~~--~kL~DFG~a~~ 498 (602)
...++|||++|.||+++.++. +.|+||+.+..
T Consensus 200 ~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 200 LMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997753 58999998864
No 417
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.04 E-value=7.5e-05 Score=77.59 Aligned_cols=185 Identities=11% Similarity=0.062 Sum_probs=130.3
Q ss_pred CccCCCCCCCCEEECcCCcCcc-------------------cCCCcCEEECcCCcCCCCCchhhhCCCCCCEEEecCCCC
Q 047576 148 PSEISALSKLQLLDLSSNRLRG-------------------RLTNLNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNSL 208 (602)
Q Consensus 148 p~~l~~L~~L~~L~Ls~N~i~~-------------------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 208 (602)
...+....+|+.+.+..+.... ....+..+.+..+ ........+....+|+.+.+..+ +
T Consensus 151 ~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~f~~~~~l~~i~~~~~-~ 228 (379)
T 4h09_A 151 DGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPST-VKTVTAYGFSYGKNLKKITITSG-V 228 (379)
T ss_dssp SCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTT-CCEECTTTTTTCSSCSEEECCTT-C
T ss_pred cchhcccccccccccccccceeecccceecccccceeccccccccccccccccc-eeEEeecccccccccceeeeccc-e
Confidence 3445666677776665543220 1233444444332 22344566777888999988765 4
Q ss_pred CCCCcccccCcCCCceeecccccCCCCc-ccccCCCCCcEEEccCCCCCCCCCCccCCCCCCccccCCCCcCCCCCchhh
Q 047576 209 IGPIPLTLSRLTSLKILILAQNQLSGLP-QEIGNLKNLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQFNSSIPNEL 287 (602)
Q Consensus 209 ~~~~p~~l~~l~~L~~L~L~~N~l~~ip-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 287 (602)
.......+.+..+|+.+.+..+ ++.|. ..+.++.+|+.+.+..+ ++......|.++++|+.+.+.++.++.....+|
T Consensus 229 ~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF 306 (379)
T 4h09_A 229 TTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVF 306 (379)
T ss_dssp CEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTT
T ss_pred eEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhh
Confidence 4455567888999999999776 66654 46788899999999754 554556688999999999999998987778899
Q ss_pred hCCCCCCEEeccCCCCCCCCCcccCCCCCCCEEeCCCCCCCCCCCcccccc
Q 047576 288 TRLTQLFHLDLSSNKLSGKIPSQIASMEDLTWLDLSNNNIKGSIPGEITKL 338 (602)
Q Consensus 288 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 338 (602)
.++.+|+.+.|..+ ++.....+|.++++|+.+.+..+ ++..-..+|.+.
T Consensus 307 ~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 307 MDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp TTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred cCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 99999999999765 66455678999999999988654 553444555554
No 418
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=97.63 E-value=5.4e-05 Score=76.90 Aligned_cols=167 Identities=18% Similarity=0.185 Sum_probs=99.9
Q ss_pred cCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhc--Ccc--------------ccccc
Q 047576 372 DSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMER--GSL--------------FRILH 435 (602)
Q Consensus 372 ~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~--gsL--------------~~~l~ 435 (602)
.....++.|..+.||++ |+.+++|+...... ...+.+|..+++++.. ..+ .+++.
T Consensus 40 ~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~~-----~~~~~~E~~~L~~L~~~~~~~~vP~v~~~~~~~lvme~i~ 110 (320)
T 3r70_A 40 NELRYLSSGDDSDTFLC----NEQYVVKVPKRDSV-----RISQKRELELYRFLENCKLSYQIPAVVYQSDRFNIMKYIK 110 (320)
T ss_dssp SCEEEEEECSSEEEEEE----TTTEEEEEESSHHH-----HHHHHHHHHHHHHHTTSCCSSBCCCEEEECSSCEEEECCC
T ss_pred EEEEeCCCCCCceEEEE----CCEEEEEeCCcHHH-----HHHHHHHHHHHHHHHhcCCCCCcceEEecCCcEEEEeecC
Confidence 34566889999999998 56788998754332 2447889988887765 111 11111
Q ss_pred cccc----hhhhcHHHHHHHHHHHHHHHHHhhhcCC--------------------------------------------
Q 047576 436 NDAE----AVELDWAKRVNIVKAMAHALAYLHHDCS-------------------------------------------- 467 (602)
Q Consensus 436 ~~~~----~~~l~~~~~~~i~~~ia~~L~~LH~~~~-------------------------------------------- 467 (602)
...- -..++..++..++.++++.+..||....
T Consensus 111 G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (320)
T 3r70_A 111 GERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIE 190 (320)
T ss_dssp CBCCCHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred CccccccccccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHHH
Confidence 1100 0113555677888999999999985321
Q ss_pred ----------------CCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCCcccccccccccccccccc-------C
Q 047576 468 ----------------PSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAYT-------M 524 (602)
Q Consensus 468 ----------------~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~ 524 (602)
..++|+|++|.||+++++..+.|+||+.+...+.................||.... .
T Consensus 191 ~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~l~~Y~~~ 270 (320)
T 3r70_A 191 TIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDNDFLCLLDCSTDDFGKEFGRKVLKYYQHK 270 (320)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEECGGGGGHHHHSCCTTSCCHHHHHHHHHHTTCS
T ss_pred HHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCCHHHHHHHHHHhcccccCHHHHHHHHHHHhcc
Confidence 23499999999999998766799999988654321111111111111123332210 0
Q ss_pred ---cCCccchhHHHHHHHHHHHcCCC
Q 047576 525 ---VMTEKYDVYSFGVVTLEVLMGKH 547 (602)
Q Consensus 525 ---~~~~~~DvwSlGvil~elltG~~ 547 (602)
....+.+.|..-..+++++.|..
T Consensus 271 ~~~~~~~~~~~~~~~~~l~~l~~~~~ 296 (320)
T 3r70_A 271 APEVAERKAELNDVYWSIDQIIYGYE 296 (320)
T ss_dssp CHHHHHHHHHHHHHTHHHHHHHSSCT
T ss_pred CcHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 02245677865556888888754
No 419
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.54 E-value=2e-05 Score=72.30 Aligned_cols=79 Identities=10% Similarity=0.135 Sum_probs=40.3
Q ss_pred cCEEECcCCcCCCCCchhhhCCCCCCEEEecCCC-CCCCCcccccCc----CCCceeecccc-cCCC--CcccccCCCCC
Q 047576 174 LNYMSLSRNMLGGLLPQEIGNLKNLIELDVGDNS-LIGPIPLTLSRL----TSLKILILAQN-QLSG--LPQEIGNLKNL 245 (602)
Q Consensus 174 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l----~~L~~L~L~~N-~l~~--ip~~~~~l~~L 245 (602)
|++|||+++.|+...-..+.++++|++|+|+++. ++...-..++.+ ++|++|+|++| ++|. + ..+.++++|
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl-~~L~~~~~L 141 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI-IALHHFRNL 141 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH-HHGGGCTTC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH-HHHhcCCCC
Confidence 3344444444443333445566666666666664 443322334433 24666666665 3554 2 234555666
Q ss_pred cEEEccCC
Q 047576 246 MLLDVGNN 253 (602)
Q Consensus 246 ~~L~L~~N 253 (602)
+.|+++++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 66666654
No 420
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.47 E-value=1.7e-05 Score=72.79 Aligned_cols=82 Identities=13% Similarity=0.180 Sum_probs=39.7
Q ss_pred CCcEEEccCCCCCCCCCCccCCCCCCccccCCCCc-CCCCCchhhhCC----CCCCEEeccCCC-CCCCCCcccCCCCCC
Q 047576 244 NLMLLDVGNNDIIGPIPSTLGLFSDLSYLDLSCNQ-FNSSIPNELTRL----TQLFHLDLSSNK-LSGKIPSQIASMEDL 317 (602)
Q Consensus 244 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~L 317 (602)
+|+.||++++.++...-..+..+++|+.|+|+++. ++...-..++.+ ++|++|+|+++. |+...-..++.+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555443333334445555555555553 443222233332 246666666653 554333344555666
Q ss_pred CEEeCCCC
Q 047576 318 TWLDLSNN 325 (602)
Q Consensus 318 ~~L~L~~N 325 (602)
+.|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 66666654
No 421
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.40 E-value=9.4e-05 Score=69.08 Aligned_cols=81 Identities=15% Similarity=0.103 Sum_probs=42.1
Q ss_pred ccCCCCCCCCEEECcCC-cCcc-----------cCCCcCEEECcCCcCCCC----CchhhhCCCCCCEEEecCCCCCCCC
Q 047576 149 SEISALSKLQLLDLSSN-RLRG-----------RLTNLNYMSLSRNMLGGL----LPQEIGNLKNLIELDVGDNSLIGPI 212 (602)
Q Consensus 149 ~~l~~L~~L~~L~Ls~N-~i~~-----------~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~ 212 (602)
..+.+-+.|++|+|++| +|.. .-+.|+.|+|++|+|... +...+..-+.|++|+|++|.|....
T Consensus 35 ~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G 114 (197)
T 1pgv_A 35 RLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL 114 (197)
T ss_dssp HHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH
T ss_pred HHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH
Confidence 34455567888888775 6652 134566666666666532 2233334455666666666654322
Q ss_pred c----ccccCcCCCceeeccc
Q 047576 213 P----LTLSRLTSLKILILAQ 229 (602)
Q Consensus 213 p----~~l~~l~~L~~L~L~~ 229 (602)
- ..+..-+.|+.|+|++
T Consensus 115 a~ala~aL~~N~tL~~L~L~n 135 (197)
T 1pgv_A 115 LARLLRSTLVTQSIVEFKADN 135 (197)
T ss_dssp HHHHHHHTTTTCCCSEEECCC
T ss_pred HHHHHHHHhhCCceeEEECCC
Confidence 1 1233334455555543
No 422
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.36 E-value=3.7e-05 Score=71.82 Aligned_cols=39 Identities=23% Similarity=0.260 Sum_probs=17.1
Q ss_pred CcCCCceeecccccCCC-----CcccccCCCCCcEEEccCCCCC
Q 047576 218 RLTSLKILILAQNQLSG-----LPQEIGNLKNLMLLDVGNNDII 256 (602)
Q Consensus 218 ~l~~L~~L~L~~N~l~~-----ip~~~~~l~~L~~L~L~~N~l~ 256 (602)
.-+.|+.|+|++|+++. |...+..-+.|+.|+|++|.|+
T Consensus 68 ~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 68 NSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp TCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred hCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 33444445555544442 2222333344555555555544
No 423
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.09 E-value=0.00058 Score=59.44 Aligned_cols=34 Identities=26% Similarity=0.266 Sum_probs=13.6
Q ss_pred ccccCCCCcCCCCCchhhhCCCCCCEEeccCCCC
Q 047576 270 SYLDLSCNQFNSSIPNELTRLTQLFHLDLSSNKL 303 (602)
Q Consensus 270 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 303 (602)
++|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 34 ~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 34 TELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp SEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 3333333333333333334444444444444443
No 424
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.82 E-value=0.002 Score=55.99 Aligned_cols=37 Identities=27% Similarity=0.274 Sum_probs=22.1
Q ss_pred CCCEEEecCCCCCCCCcccccCcCCCceeecccccCC
Q 047576 197 NLIELDVGDNSLIGPIPLTLSRLTSLKILILAQNQLS 233 (602)
Q Consensus 197 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 233 (602)
+|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4666666666666555555566666666666666553
No 425
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=96.70 E-value=0.0024 Score=64.23 Aligned_cols=116 Identities=16% Similarity=0.187 Sum_probs=74.2
Q ss_pred ccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcC-c--ccccc-------------cccc
Q 047576 375 YCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERG-S--LFRIL-------------HNDA 438 (602)
Q Consensus 375 ~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~g-s--L~~~l-------------~~~~ 438 (602)
..++.|....||+. |+.+++|+.... .....+.+|..+++++.+. . +-+.+ .+..
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~~-----~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKSQ-----QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSH-----HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eecCCCcceeEEEE----CCEEEEEecCCc-----hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 45678888899998 466888886432 1245788899999887542 1 11111 1001
Q ss_pred chh--------hhcHHHHHHHHHHHHHHHHHhhhc---------------------------------------------
Q 047576 439 EAV--------ELDWAKRVNIVKAMAHALAYLHHD--------------------------------------------- 465 (602)
Q Consensus 439 ~~~--------~l~~~~~~~i~~~ia~~L~~LH~~--------------------------------------------- 465 (602)
++. .++..++..++.++++.|..||..
T Consensus 96 ~G~~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 175 (306)
T 3tdw_A 96 QGQILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLR 175 (306)
T ss_dssp CSEECHHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred CCeECchhhhhhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHH
Confidence 111 123445566677777777777742
Q ss_pred ------------CCCCeEEeCCCCCCeeeCC---CCcc-eeecccccccc
Q 047576 466 ------------CSPSVVHRDISSNNILLNS---KLEA-FVADFGTARLL 499 (602)
Q Consensus 466 ------------~~~~ivH~DLkp~NILld~---~~~~-kL~DFG~a~~~ 499 (602)
....++|+|++|.||++++ ++.+ .|+||+.+..-
T Consensus 176 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 176 FQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 1235699999999999987 4554 79999987654
No 426
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.50 E-value=0.0014 Score=65.14 Aligned_cols=52 Identities=21% Similarity=0.253 Sum_probs=37.2
Q ss_pred ccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhh
Q 047576 371 IDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQM 425 (602)
Q Consensus 371 f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l 425 (602)
+.....+|.|..+.||+.+..||+.|++|+....... ....|..|...|+.+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~---~~~~~~~Ea~~L~~L 68 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPA---LDGLFRAEALGLDWL 68 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC---CTTHHHHHHHHHHHH
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc---hhhHHHHHHHHHHHH
Confidence 3345667999999999999999999999986543321 123466777777444
No 427
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=96.34 E-value=0.002 Score=64.16 Aligned_cols=51 Identities=24% Similarity=0.250 Sum_probs=36.7
Q ss_pred CcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhh
Q 047576 373 SKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQME 426 (602)
Q Consensus 373 ~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~ 426 (602)
....++.|.++.||+++..+|+.++||+...... .....|..|+.+++.+.
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~---~~~~~~~~E~~~L~~L~ 69 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAP---ALDGLFRAEALGLDWLG 69 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC---CCTTHHHHHHHHHHHHT
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCc---chhHHHHHHHHHHHHHH
Confidence 3567899999999999988899999998643221 11245677888775543
No 428
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=96.03 E-value=0.0063 Score=62.24 Aligned_cols=32 Identities=22% Similarity=0.297 Sum_probs=26.6
Q ss_pred CCCeEEeCCCCCCeeeCCCCcceeeccccccc
Q 047576 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARL 498 (602)
Q Consensus 467 ~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~ 498 (602)
...++|+|++|.||+++++..+.|+||+.+..
T Consensus 221 ~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~ 252 (357)
T 3ats_A 221 EPVLLWGDARVGNVLYRDFQPVAVLDWEMVAL 252 (357)
T ss_dssp CCEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred CceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence 35789999999999999654578999998754
No 429
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=96.01 E-value=0.0069 Score=62.40 Aligned_cols=32 Identities=31% Similarity=0.377 Sum_probs=27.5
Q ss_pred CCeEEeCCCCCCeeeCCCCcceeecccccccc
Q 047576 468 PSVVHRDISSNNILLNSKLEAFVADFGTARLL 499 (602)
Q Consensus 468 ~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~ 499 (602)
..++|+|++|.||+++++..+.|+||+.+..-
T Consensus 213 ~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 213 RHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp CEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred cEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 45799999999999988777889999988653
No 430
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=95.96 E-value=0.015 Score=57.90 Aligned_cols=115 Identities=16% Similarity=0.111 Sum_probs=68.5
Q ss_pred ccCcccccccccccceeeecCCCcEEeeeccCCchhHHHHHhhhhHhHHHHHHhhhcC---------------ccccccc
Q 047576 371 IDSKYCIGTGAYGSVYKAQLPNGRVFALKKLNSPETEELAFIRSFRNEAQVLSQMERG---------------SLFRILH 435 (602)
Q Consensus 371 f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~E~~il~~l~~g---------------sL~~~l~ 435 (602)
+.....++.|....+|++ +.+++|+...... ......+|..+++.+..- -+.+++.
T Consensus 20 ~~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~----~~~~r~~E~~~l~~l~~~g~~P~~~~~~~~~~~~v~e~i~ 90 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA-----GDLCLRIPGKGTE----EYINRANEAVAAREAAKAGVSPEVLHVDPATGVMVTRYIA 90 (301)
T ss_dssp CCSCEEEESCSSEEEEEE-----TTEEEEEECC--------CCCHHHHHHHHHHHHHTTSSCCEEEECTTTCCEEEECCT
T ss_pred ccceeEcCCcccccccee-----eeEEEECCCCCcc----ceeCHHHHHHHHHHHHHcCCCCceEEEECCCCEEEEeecC
Confidence 333567888999999999 4588888764321 112234577666544321 1222220
Q ss_pred cccchhhhcHHHH---HHHHHHHHHHHHHhhhcC----------------------------------------------
Q 047576 436 NDAEAVELDWAKR---VNIVKAMAHALAYLHHDC---------------------------------------------- 466 (602)
Q Consensus 436 ~~~~~~~l~~~~~---~~i~~~ia~~L~~LH~~~---------------------------------------------- 466 (602)
.+..++.... ..++.++++.|+-+|...
T Consensus 91 ---~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 167 (301)
T 3dxq_A 91 ---GAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALA 167 (301)
T ss_dssp ---TCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHH
T ss_pred ---CCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHH
Confidence 1222333222 225666777777777431
Q ss_pred ----CCCeEEeCCCCCCeeeCCCCcceeeccccccc
Q 047576 467 ----SPSVVHRDISSNNILLNSKLEAFVADFGTARL 498 (602)
Q Consensus 467 ----~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~ 498 (602)
...++|+|+.|.||+ ..++.+.++||..+..
T Consensus 168 ~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 168 AHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp SSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred hcCCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 123799999999999 5566789999987754
No 431
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=95.92 E-value=0.0071 Score=59.13 Aligned_cols=29 Identities=24% Similarity=0.352 Sum_probs=25.5
Q ss_pred eEEeCCCCCCeeeCCCCcceeeccccccc
Q 047576 470 VVHRDISSNNILLNSKLEAFVADFGTARL 498 (602)
Q Consensus 470 ivH~DLkp~NILld~~~~~kL~DFG~a~~ 498 (602)
++|+|+.+.||++++++.+-|+||+.+..
T Consensus 195 l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 195 VTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp EECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred EEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 79999999999999887777999997753
No 432
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=95.36 E-value=0.018 Score=59.82 Aligned_cols=31 Identities=23% Similarity=0.315 Sum_probs=26.2
Q ss_pred CCCeEEeCCCCCCeeeCCCCcceeeccccccc
Q 047576 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARL 498 (602)
Q Consensus 467 ~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~ 498 (602)
...++|||+.|.||+++.+ .++++||..+..
T Consensus 226 ~~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~ 256 (397)
T 2olc_A 226 AETLIHGDLHTGSIFASEH-ETKVIDPEFAFY 256 (397)
T ss_dssp CCEEECSCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred CCceeeCCCCcCcEEEeCC-CeEEEeCccccc
Confidence 4688999999999999876 489999987654
No 433
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=94.28 E-value=0.037 Score=55.77 Aligned_cols=32 Identities=31% Similarity=0.567 Sum_probs=28.6
Q ss_pred CCCeEEeCCCCCCeeeCCCCcceeeccccccc
Q 047576 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARL 498 (602)
Q Consensus 467 ~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~ 498 (602)
...++|+|+++.||+++.++.+.|+||+.+..
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 57899999999999998888899999997753
No 434
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=92.05 E-value=0.1 Score=54.60 Aligned_cols=78 Identities=12% Similarity=0.044 Sum_probs=48.6
Q ss_pred CCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCCcccccc--ccccccccccccC---cCCccchhHHHHHHHHH
Q 047576 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAG--SYGYIAPELAYTM---VMTEKYDVYSFGVVTLE 541 (602)
Q Consensus 467 ~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~~DvwSlGvil~e 541 (602)
...++|||++|.|||++.++ ++++||+.+..-....... .... ...|.+|+..... ......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIG-AYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHH-HHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHH-HHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 67899999999999998876 9999999886532110000 0010 1345666654321 11223456677888887
Q ss_pred HHcCC
Q 047576 542 VLMGK 546 (602)
Q Consensus 542 lltG~ 546 (602)
..+++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=89.20 E-value=0.3 Score=49.00 Aligned_cols=33 Identities=33% Similarity=0.397 Sum_probs=28.2
Q ss_pred CCCeEEeCCCCCCeeeCCC----Ccceeecccccccc
Q 047576 467 SPSVVHRDISSNNILLNSK----LEAFVADFGTARLL 499 (602)
Q Consensus 467 ~~~ivH~DLkp~NILld~~----~~~kL~DFG~a~~~ 499 (602)
...++|||+.+.||+++.+ ..+.|+||+.+..-
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 5689999999999999874 67899999987653
No 436
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=86.88 E-value=0.14 Score=51.08 Aligned_cols=32 Identities=22% Similarity=0.240 Sum_probs=26.9
Q ss_pred CCCeEEeCCCCCCeeeCCCCcceeeccccccc
Q 047576 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARL 498 (602)
Q Consensus 467 ~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~ 498 (602)
..+++|+|+++.||+++++..+.++||+.+..
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 45799999999999999876668999987653
No 437
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=86.08 E-value=0.46 Score=47.40 Aligned_cols=30 Identities=27% Similarity=0.350 Sum_probs=25.7
Q ss_pred CCCeEEeCCCCCCeeeCCCCcceeeccccccc
Q 047576 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARL 498 (602)
Q Consensus 467 ~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~ 498 (602)
...++|||+++.||+++ + .+.++||+.+..
T Consensus 194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 45789999999999999 4 889999987754
No 438
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=83.82 E-value=1.3 Score=41.50 Aligned_cols=103 Identities=18% Similarity=0.102 Sum_probs=61.9
Q ss_pred ccccccccccchhhhcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCCccc
Q 047576 429 SLFRILHNDAEAVELDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTL 508 (602)
Q Consensus 429 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~~~~ 508 (602)
+|.++|.. ...++++.++-.++.|.+.+|.-.-.. +.+ ..+=+-|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~--~~~PlsEEqaWALc~Qc~~~L~~~~~~-~~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 34 SLEEILRL--YNQPINEEQAWAVCYQCCGSLRAAARR-RQP-RHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHT-TCC-CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred cHHHHHHH--cCCCcCHHHHHHHHHHHHHHHHhhhhc-ccC-CceecCCcceEEecCCceeccc-cccc-----------
Confidence 45555554 345699999999999999988776210 011 1223346788888888876653 1110
Q ss_pred cccccccccccccccCcCCccchhHHHHHHHHHHHcCCCCC
Q 047576 509 LAGSYGYIAPELAYTMVMTEKYDVYSFGVVTLEVLMGKHPR 549 (602)
Q Consensus 509 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~Pf 549 (602)
.....+.|||... ...+.+.=|||+|+++|..+--..|=
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e 136 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE 136 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc
Confidence 1123466888764 34567889999999999998755553
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=82.58 E-value=0.76 Score=48.56 Aligned_cols=17 Identities=29% Similarity=0.374 Sum_probs=15.2
Q ss_pred CCCeEEeCCCCCCeeeC
Q 047576 467 SPSVVHRDISSNNILLN 483 (602)
Q Consensus 467 ~~~ivH~DLkp~NILld 483 (602)
...++|+|+.+.|||++
T Consensus 289 ~~v~cHnDl~~gNIL~~ 305 (458)
T 2qg7_A 289 PIVLCHCDLLSSNIINT 305 (458)
T ss_dssp CEEEECSCCCGGGEEEC
T ss_pred CeeEEecCCCCCcEEee
Confidence 45789999999999998
No 440
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=81.93 E-value=0.8 Score=46.21 Aligned_cols=33 Identities=21% Similarity=0.430 Sum_probs=28.6
Q ss_pred CCCeEEeCCCCCCeeeCCCCcceeecccccccc
Q 047576 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARLL 499 (602)
Q Consensus 467 ~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~ 499 (602)
...++|+|+.+.||++++++.+.++||+.+...
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 457999999999999998888999999877543
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=81.84 E-value=0.76 Score=46.81 Aligned_cols=31 Identities=26% Similarity=0.371 Sum_probs=25.2
Q ss_pred CCCeEEeCCCCCCeeeCCCCcceeeccccccc
Q 047576 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARL 498 (602)
Q Consensus 467 ~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~ 498 (602)
...++|+|+++.||+++++. +.++||..+..
T Consensus 211 ~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~ 241 (369)
T 3c5i_A 211 TIVFCHNDLQENNIINTNKC-LRLIDFEYSGF 241 (369)
T ss_dssp CEEEECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred CeEEEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence 45789999999999998654 89999987653
No 442
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=76.47 E-value=0.76 Score=48.11 Aligned_cols=32 Identities=28% Similarity=0.403 Sum_probs=25.2
Q ss_pred CCCeEEeCCCCCCeeeCCC----------------------------Ccceeeccccccc
Q 047576 467 SPSVVHRDISSNNILLNSK----------------------------LEAFVADFGTARL 498 (602)
Q Consensus 467 ~~~ivH~DLkp~NILld~~----------------------------~~~kL~DFG~a~~ 498 (602)
...++|+|+.+.||+++++ +.+.++||..+..
T Consensus 248 ~~v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~~ 307 (429)
T 1nw1_A 248 PVTFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASY 307 (429)
T ss_dssp CEEEECSCCCGGGEEEEC------------------------------CCEECCCTTCEE
T ss_pred CeEEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCCc
Confidence 3468999999999999875 6788999987653
No 443
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=71.73 E-value=1.3 Score=45.60 Aligned_cols=32 Identities=31% Similarity=0.398 Sum_probs=27.2
Q ss_pred CCCeEEeCCCCCCeeeCCC----Ccceeeccccccc
Q 047576 467 SPSVVHRDISSNNILLNSK----LEAFVADFGTARL 498 (602)
Q Consensus 467 ~~~ivH~DLkp~NILld~~----~~~kL~DFG~a~~ 498 (602)
...++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 219 ~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 219 PVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp CEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred CcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 4578999999999999876 6889999987753
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=70.11 E-value=1.4 Score=45.50 Aligned_cols=31 Identities=26% Similarity=0.337 Sum_probs=26.8
Q ss_pred CCCeEEeCCCCCCeeeCCC------Ccceeecccccc
Q 047576 467 SPSVVHRDISSNNILLNSK------LEAFVADFGTAR 497 (602)
Q Consensus 467 ~~~ivH~DLkp~NILld~~------~~~kL~DFG~a~ 497 (602)
...++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 243 ~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 243 PVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp CEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred CeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 4578999999999999876 789999998764
No 445
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=64.98 E-value=6.4 Score=36.63 Aligned_cols=81 Identities=6% Similarity=0.076 Sum_probs=59.7
Q ss_pred hcHHHHHHHHHHHHHHHHHhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCCccccccccccccccccc
Q 047576 443 LDWAKRVNIVKAMAHALAYLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELAY 522 (602)
Q Consensus 443 l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~ 522 (602)
++..++.+++..|+...++++ .=+|--+.|+|+++|.++.|++.=.|+...+ +|.
T Consensus 78 ~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL~f~~~~~p~i~~RGik~~l-----------------~P~--- 132 (215)
T 4ann_A 78 FTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDELFFTRDGLPIAKTRGLQNVV-----------------DPL--- 132 (215)
T ss_dssp SCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGEEECTTSCEEESCCEETTTB-----------------SCC---
T ss_pred cCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceEEEcCCCCEEEEEccCccCC-----------------CCC---
Confidence 677888899999988876666 3478899999999999999999877764332 221
Q ss_pred cCcCCccchhHHHHHHHHHHHcCCCCCC
Q 047576 523 TMVMTEKYDVYSFGVVTLEVLMGKHPRD 550 (602)
Q Consensus 523 ~~~~~~~~DvwSlGvil~elltG~~Pf~ 550 (602)
..+...=.-.+=+++..+++++..|+
T Consensus 133 --~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 133 --PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp --CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred --CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 11222234457788889999999986
No 446
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=64.86 E-value=1.9 Score=42.95 Aligned_cols=27 Identities=22% Similarity=0.374 Sum_probs=24.2
Q ss_pred CCCeEEeCCCCCCeeeCCCCcceeeccc
Q 047576 467 SPSVVHRDISSNNILLNSKLEAFVADFG 494 (602)
Q Consensus 467 ~~~ivH~DLkp~NILld~~~~~kL~DFG 494 (602)
.+.++|+|+.+.|++++.++ +.|+||.
T Consensus 206 ~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 206 KPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp CCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred CceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 57899999999999999887 8899984
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=62.73 E-value=2.7 Score=43.39 Aligned_cols=30 Identities=30% Similarity=0.454 Sum_probs=24.7
Q ss_pred CeEEeCCCCCCeee------CCCCcceeeccccccc
Q 047576 469 SVVHRDISSNNILL------NSKLEAFVADFGTARL 498 (602)
Q Consensus 469 ~ivH~DLkp~NILl------d~~~~~kL~DFG~a~~ 498 (602)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4456789999988754
No 448
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=60.29 E-value=6.5 Score=36.71 Aligned_cols=82 Identities=15% Similarity=0.174 Sum_probs=58.0
Q ss_pred hcHHHHHHHHHHHHHHHH-HhhhcCCCCeEEeCCCCCCeeeCCCCcceeecccccccccCCCCCcccccccccccccccc
Q 047576 443 LDWAKRVNIVKAMAHALA-YLHHDCSPSVVHRDISSNNILLNSKLEAFVADFGTARLLHADSSNQTLLAGSYGYIAPELA 521 (602)
Q Consensus 443 l~~~~~~~i~~~ia~~L~-~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~ 521 (602)
++..++.+++..++.... +++ .-+|--+.|+|+++|.++.|++.=.|+-..+ +|.-
T Consensus 82 ~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~f~~~~~p~i~hRGi~~~l-----------------pP~e- 138 (219)
T 4ano_A 82 TTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLMFNRALEPFFLHVGVKESL-----------------PPDE- 138 (219)
T ss_dssp SCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEEECTTCCEEESCCEETTTB-----------------SSCS-
T ss_pred cCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEEEeCCCcEEEEEcCCcccC-----------------CCCC-
Confidence 667788888888877665 444 5688899999999999999999877764332 2321
Q ss_pred ccCcCCccchhHHHHHHHHHHHcCCCCCCC
Q 047576 522 YTMVMTEKYDVYSFGVVTLEVLMGKHPRDL 551 (602)
Q Consensus 522 ~~~~~~~~~DvwSlGvil~elltG~~Pf~~ 551 (602)
.+..-=+-.+=+++..++.++..|+.
T Consensus 139 ----~~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 139 ----WDDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp ----CCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred ----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 12222234567788888899888863
No 449
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=59.33 E-value=2.9 Score=43.52 Aligned_cols=31 Identities=23% Similarity=0.394 Sum_probs=26.6
Q ss_pred CCCeEEeCCCCCCeeeCCCCcceeeccccccc
Q 047576 467 SPSVVHRDISSNNILLNSKLEAFVADFGTARL 498 (602)
Q Consensus 467 ~~~ivH~DLkp~NILld~~~~~kL~DFG~a~~ 498 (602)
...++|+|+.+.||+ +.++.+.++||..+..
T Consensus 261 ~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 261 SLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp CEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 356899999999999 7788899999987754
No 450
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=31.78 E-value=56 Score=26.00 Aligned_cols=46 Identities=22% Similarity=0.093 Sum_probs=24.4
Q ss_pred cCCCCCchhhhCCCCCCEEEecCCCCCCCCcccccCcCCCceeeccc
Q 047576 183 MLGGLLPQEIGNLKNLIELDVGDNSLIGPIPLTLSRLTSLKILILAQ 229 (602)
Q Consensus 183 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 229 (602)
.++.+-...|.++++|+.+.|-.+ ++.....+|.++.+|+.+.+.+
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344444555666666666666543 3334444555555555555544
Done!