BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047585
(185 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FBU|A Chain A, The Crystal Structure Of The Acetyltransferase (gnat
Family) From Bacillus Anthracis
pdb|3FBU|B Chain B, The Crystal Structure Of The Acetyltransferase (gnat
Family) From Bacillus Anthracis
Length = 168
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 6/151 (3%)
Query: 14 FVELSHISLRPLELSDIDDFMVWVSDPKVARFCPWESYTNKEDGINYIKTKVPQHPW-FR 72
F++ + +R E D + + SD V ++ P E +ED N++ + ++ F
Sbjct: 2 FIKAERLLIRKFEFKDWEAVHEYTSDSDVMKYIP-EGVFTEEDTRNFVNKNMGENAKNFP 60
Query: 73 AICVN-NRPVGATSVRPNSGNDMCRAELGYVLASKYWGKGIATQAVKIVTKTIFDEWPHL 131
I + N VG G E+G+V KY+ KG A++A + K F E L
Sbjct: 61 VILIGENILVGHIVFHKYFGEHT--YEIGWVFNPKYFNKGYASEAAQATLKYGFKEMK-L 117
Query: 132 ERLEAVVDVENVASQRVLEKAGFKREGVLGK 162
R+ A EN S RV+EK G +REG K
Sbjct: 118 HRIIATCQPENTPSYRVMEKIGMRREGYFKK 148
>pdb|2ZXV|A Chain A, Crystal Structure Of Putative Acetyltransferase From T.
Thermophilus Hb8
pdb|2ZXV|B Chain B, Crystal Structure Of Putative Acetyltransferase From T.
Thermophilus Hb8
pdb|2ZXV|C Chain C, Crystal Structure Of Putative Acetyltransferase From T.
Thermophilus Hb8
pdb|2ZXV|D Chain D, Crystal Structure Of Putative Acetyltransferase From T.
Thermophilus Hb8
Length = 194
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 16 ELSHISLRPLELSDIDDFMVWVSDPKVARFCPWESYTNKEDGINYIKTKVPQHP----WF 71
E H+ L PL L+ + F+ DP+V RF E+ + + P W
Sbjct: 9 EGRHVRLEPLALAHLPAFLRHY-DPEVXRFLSRAPVAPTEEALRAHLEGLLGEPGRVNW- 66
Query: 72 RAICVNNRPVGATSV-RPNSGNDMCRAELGYVLASKYWGKGIATQAVKIVTKTIFDEWPH 130
AI G SV P + + ELG +L +WG +A ++ + F E
Sbjct: 67 -AILFGKEVAGRISVIAPEP--EHAKLELGTMLFKPFWGSPANKEAKYLLLRHAF-EVLR 122
Query: 131 LERLEAVVDVENVASQRVLEKAGFKREGVLGK-YFIMKGSTKDMVVFSLLSTD 182
ER++ VD+ N SQR LE G REGVL K + G+ +D VV+S+L +
Sbjct: 123 AERVQFKVDLRNERSQRALEALGAVREGVLRKNRRLPDGAFRDDVVYSVLKEE 175
>pdb|2Z10|A Chain A, Crystal Structure Of Putative Acetyltransferase
pdb|2Z11|A Chain A, Crystal Structure Of Putative Acetyltransferase
Length = 194
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 16 ELSHISLRPLELSDIDDFMVWVSDPKVARFCPWESYTNKEDGINYIKTKVPQHP----WF 71
E H+ L PL L+ + F+ DP+V RF E+ + + P W
Sbjct: 9 EGRHVRLEPLALAHLPAFLRHY-DPEVYRFLSRAPVAPTEEALRAHLEGLLGEPGRVNW- 66
Query: 72 RAICVNNRPVGATSV-RPNSGNDMCRAELGYVLASKYWGKGIATQAVKIVTKTIFDEWPH 130
AI G SV P + + ELG +L +WG +A ++ + F E
Sbjct: 67 -AILFGKEVAGRISVIAPEP--EHAKLELGTMLFKPFWGSPANKEAKXLLLRHAF-EVLR 122
Query: 131 LERLEAVVDVENVASQRVLEKAGFKREGVLGK-YFIMKGSTKDMVVFSLLSTD 182
ER++ VD+ N SQR LE G REGVL K + G+ +D VV+S+L +
Sbjct: 123 AERVQFKVDLRNERSQRALEALGAVREGVLRKNRRLPDGAFRDDVVYSVLKEE 175
>pdb|2Z0Z|A Chain A, Crystal Structure Of Putative Acetyltransferase
Length = 194
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 16 ELSHISLRPLELSDIDDFMVWVSDPKVARFCPWESYTNKEDGINYIKTKVPQHP----WF 71
E H+ L PL L+ + F+ DP+V RF E+ + + P W
Sbjct: 9 EGRHVRLEPLALAHLPAFLRHY-DPEVYRFLSRAPVAPTEEALRAHLEGLLGEPGRVNW- 66
Query: 72 RAICVNNRPVGATSV-RPNSGNDMCRAELGYVLASKYWGKGIATQAVKIVTKTIFDEWPH 130
AI G SV P + + ELG +L +WG +A ++ + F E
Sbjct: 67 -AILFGKEVAGRISVIAPEP--EHAKLELGTMLFKPFWGSPANKEAKYLLLRHAF-EVLR 122
Query: 131 LERLEAVVDVENVASQRVLEKAGFKREGVLGK-YFIMKGSTKDMVVFSLLSTD 182
ER++ VD+ N SQR LE G REGVL K + G+ +D VV+S+L +
Sbjct: 123 AERVQFKVDLRNERSQRALEALGAVREGVLRKNRRLPDGAFRDDVVYSVLKEE 175
>pdb|3IGR|A Chain A, The Crystal Structure Of Ribosomal-protein-s5-alanine
Acetyltransferase From Vibrio Fischeri To 2.0a
pdb|3IGR|B Chain B, The Crystal Structure Of Ribosomal-protein-s5-alanine
Acetyltransferase From Vibrio Fischeri To 2.0a
Length = 184
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 97 AELGYVLASKYWGKGIATQAVKIVTKTIFDEWPHLERLEAVVDVENVASQRVLEKAGFKR 156
+GY L S+Y GKGI +AV + F +L R+ A N S +VL GF +
Sbjct: 97 GHVGYSLDSEYQGKGIXRRAVNVTIDWXFKA-QNLHRIXAAYIPRNEKSAKVLAALGFVK 155
Query: 157 EGVLGKYFIMKGSTKDMVVFSLLSTDPK 184
EG KY + G+ +D ++ S ++ D K
Sbjct: 156 EGEAKKYLYINGAWEDHILTSKINDDWK 183
>pdb|1NSL|A Chain A, Crystal Structure Of Probable Acetyltransferase
pdb|1NSL|B Chain B, Crystal Structure Of Probable Acetyltransferase
pdb|1NSL|C Chain C, Crystal Structure Of Probable Acetyltransferase
pdb|1NSL|D Chain D, Crystal Structure Of Probable Acetyltransferase
pdb|1NSL|E Chain E, Crystal Structure Of Probable Acetyltransferase
pdb|1NSL|F Chain F, Crystal Structure Of Probable Acetyltransferase
Length = 184
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 96 RAELGYVLASKYWGKGIATQAVKIVTKTIFDEWPHLERLEAVVDVENVASQRVLEKAGFK 155
+AE+GY +A ++ GKGI T A + + F+E L R+ V N S+ V E+ GF
Sbjct: 94 KAEIGYWIAKEFEGKGIITAACRKLITYAFEEL-ELNRVAICAAVGNEKSRAVPERIGFL 152
Query: 156 REGVLGKYFIMKGSTKDMVVFSLLSTD 182
EG + G D+V +SLL +
Sbjct: 153 EEGKARDGLYVNGXHHDLVYYSLLKRE 179
>pdb|2FCK|A Chain A, Structure Of A Putative Ribosomal-Protein-Serine
Acetyltransferase From Vibrio Cholerae
Length = 181
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 97 AELGYVLASKYWGKGIATQAVKIVTKTIFDEWPHLERLEAVVDVENVASQRVLEKAGFKR 156
A LGY + +Y +G +A+ + F+ L RLE V D ENV SQ + + G R
Sbjct: 99 ASLGYWIGDRYQRQGYGKEALTALILFCFERL-ELTRLEIVCDPENVPSQALALRCGANR 157
Query: 157 EGVLGKYFIMKGSTKDMVVFSLL 179
E + F+ G K +VFSL+
Sbjct: 158 EQLAPNRFLYAGEPKAGIVFSLI 180
>pdb|3TCV|A Chain A, Crystal Structure Of A Gcn5-Related N-Acetyltransferase
From Brucella Melitensis
pdb|3TCV|B Chain B, Crystal Structure Of A Gcn5-Related N-Acetyltransferase
From Brucella Melitensis
Length = 246
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 63 TKVPQHPWFRAICVNNRPVGATSVRPNSGNDMCRAELGYV--------LASKYWGKGI-- 112
T+ PW ++ P+ + SG R L + + S YWG I
Sbjct: 81 TRAEFEPWLDKASKSDDPLFFAVIDKASGKVAGRQALMRIDPANGVIEIGSIYWGPLISR 140
Query: 113 ---ATQAVKIVTKTIFDEWPHLERLEAVVDVENVASQRVLEKAGFKREGVLGKYFIMKGS 169
AT+A + + +FD + R E EN S+R E+ GF+ EG+ ++ ++KG
Sbjct: 141 RPAATEAQFLFMQYVFDVLGY-RRYEWECHNENGPSRRAAERFGFRFEGIFRQHMVVKGR 199
Query: 170 TKDMVVFSLLSTD 182
+D FS+L ++
Sbjct: 200 NRDTAWFSVLDSE 212
>pdb|3R95|A Chain A, Crystal Structure Of Microcin C7 Self Immunity
Acetyltransferase Mcce In Complex With Acetyl-Coa
pdb|3R95|B Chain B, Crystal Structure Of Microcin C7 Self Immunity
Acetyltransferase Mcce In Complex With Acetyl-Coa
pdb|3R96|A Chain A, Crystal Structure Of Microcin C7 Self Immunity
Acetyltransferase Mcce In Complex With Acetyl-Coa And
Amp
pdb|3R96|B Chain B, Crystal Structure Of Microcin C7 Self Immunity
Acetyltransferase Mcce In Complex With Acetyl-Coa And
Amp
pdb|3R9E|A Chain A, Crystal Structure Of Microcin C7 Self Immunity
Acetyltransferase Mcce In Complex With Coenzyme A And
Aspartyl Sulfamoyl Adenosine (Dsa)
pdb|3R9E|B Chain B, Crystal Structure Of Microcin C7 Self Immunity
Acetyltransferase Mcce In Complex With Coenzyme A And
Aspartyl Sulfamoyl Adenosine (Dsa)
pdb|3R9F|A Chain A, Crystal Structure Of Microcin C7 Self Immunity
Acetyltransferase Mcce In Complex With Coenzyme A And
Glutamyl Sulfamoyl Adenosine (Esa)
pdb|3R9F|B Chain B, Crystal Structure Of Microcin C7 Self Immunity
Acetyltransferase Mcce In Complex With Coenzyme A And
Glutamyl Sulfamoyl Adenosine (Esa)
pdb|3R9G|A Chain A, Crystal Structure Of Microcin C7 Self Immunity
Acetyltransferase Mcce In Complex With Coenzyme A And
Processed Microcin C7 Antibiotic
pdb|3R9G|B Chain B, Crystal Structure Of Microcin C7 Self Immunity
Acetyltransferase Mcce In Complex With Coenzyme A And
Processed Microcin C7 Antibiotic
Length = 188
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 97 AELGYVLASKYWGKGIATQAVKIVTKTIFDEWPHLERLEAVVDVENVASQRVLEKAGFKR 156
A +GY L + + GKGI T A+ + + D ++R V+N S + GF
Sbjct: 105 AYIGYWLGANFQGKGIVTNAINKLIQEYGDSGV-IKRFVIKCIVDNKKSNATALRCGFTL 163
Query: 157 EGVLGKYFIMKGSTKDMVVFS 177
EGVL K I+ G + D ++S
Sbjct: 164 EGVLQKAEILNGVSYDQNIYS 184
>pdb|3TTH|A Chain A, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|B Chain B, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|C Chain C, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|D Chain D, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|E Chain E, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|F Chain F, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|G Chain G, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|H Chain H, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|I Chain I, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|J Chain J, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|K Chain K, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|L Chain L, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
Length = 170
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 47 PWESYTNKED-GINYIKTKVPQHPWFRAICVNNRPVGATSVRPNSGNDMC--RAELGYVL 103
P+ESY ED I +I + + + + N VG + + D R E ++
Sbjct: 37 PYESYRELEDLHIKHIHDQSERRFIIKDLKDN--KVGLVEL---TEIDFIHRRCEFAIII 91
Query: 104 ASKYWGKGIATQAVKIVTKTIFDEWPHLERLEAVVDVENVASQRVLEKAGFKREGVLGKY 163
+ GKG AT+A + + F +L ++ +VD +N A+ + K+GF EG L
Sbjct: 92 SPGEEGKGYATEATDLTVEYAFS-ILNLHKIYLLVDEDNPAALHIYRKSGFAEEGKLVDE 150
Query: 164 FIMKGSTKDMV 174
+ KG + +
Sbjct: 151 YYSKGRYRTAI 161
>pdb|2ZW5|A Chain A, Crystal Structure Of Bleomycin N-Acetyltransferase
Complexed With Coenzyme A In The Trigonal Crystal
pdb|2ZW5|B Chain B, Crystal Structure Of Bleomycin N-Acetyltransferase
Complexed With Coenzyme A In The Trigonal Crystal
pdb|2ZW6|A Chain A, Crystal Structure Of Bleomycin N-Acetyltransferase From
Bleomycin-Producing Streptomyces Verticillus Atcc15003
pdb|2ZW6|B Chain B, Crystal Structure Of Bleomycin N-Acetyltransferase From
Bleomycin-Producing Streptomyces Verticillus Atcc15003
Length = 301
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 99 LGYVLASKYWGKGIATQAVKIVTKTIFDEWPHLERLEAVVDVENVASQRVLEKAGFKREG 158
L ++L WG G AT+A V ++ L+R+EA ++ N S V + G
Sbjct: 95 LTWLLRRDSWGHGYATEAAAAVVGHALEDG-GLDRVEAWIEAGNRRSLAVAARVGLTERA 153
Query: 159 VLGKYFIMKGSTKDMVVFS 177
L +++ + +MVV
Sbjct: 154 RLAQHYPHRPGPHEMVVLG 172
>pdb|1V0C|A Chain A, Structure Of Aac(6')-Ib In Complex With Kanamycin C And
Acetylcoa.
pdb|2BUE|A Chain A, Structure Of Aac(6')-Ib In Complex With Ribostamycin And
Coenzyme A.
pdb|2VQY|A Chain A, Structure Of Aac(6')-Ib In Complex With Parmomycin And
Acetylcoa
Length = 202
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 109 GKGIATQAVKIVTKTIFDEWPHLERLEAVVDVENVASQRVLEKAGFKREGVL 160
GKG+ T+ V+ + + +F++ P + +++ N+ + R EKAGF+R+G +
Sbjct: 128 GKGLGTKLVRALVELLFND-PEVTKIQTDPSPSNLRAIRCYEKAGFERQGTV 178
>pdb|2PR8|A Chain A, Crystal Structure Of Aminoglycoside N-Acetyltransferase
Aac(6')-Ib11
pdb|2PR8|B Chain B, Crystal Structure Of Aminoglycoside N-Acetyltransferase
Aac(6')-Ib11
Length = 196
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 109 GKGIATQAVKIVTKTIFDEWPHLERLEAVVDVENVASQRVLEKAGFKREGVL 160
GKG+ T+ V+ + + +F++ P + +++ N+ + R EKAGF+R+G +
Sbjct: 115 GKGLGTKLVRALVELLFND-PEVTKIQTDPSPSNLRAIRCYEKAGFERQGTV 165
>pdb|2PRB|A Chain A, Crystal Structure Of Aminoglycoside Acetyltransferase
Aac(6')-Ib In Complex Whith Coenzyme A
pdb|2QIR|A Chain A, Crystal Structure Of Aminoglycoside Acetyltransferase
Aac(6')-Ib In Complex Whith Coenzyme A And Kanamycin
Length = 196
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 109 GKGIATQAVKIVTKTIFDEWPHLERLEAVVDVENVASQRVLEKAGFKREGVL 160
GKG+ T+ V+ + + +F++ P + +++ N+ + R EKAGF+R+G +
Sbjct: 115 GKGLGTKLVRALVELLFND-PEVTKIQTDPSPSNLRAIRCYEKAGFERQGTV 165
>pdb|2VI7|A Chain A, Structure Of A Putative Acetyltransferase (Pa1377)from
Pseudomonas Aeruginosa
pdb|2VI7|B Chain B, Structure Of A Putative Acetyltransferase (Pa1377)from
Pseudomonas Aeruginosa
pdb|2VI7|C Chain C, Structure Of A Putative Acetyltransferase (Pa1377)from
Pseudomonas Aeruginosa
Length = 177
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 65/158 (41%), Gaps = 15/158 (9%)
Query: 30 IDDFMVWVSDPKVARFCPWESYTNKEDGINYIKTKVPQHPWFRAICVNNRPV-GATSV-- 86
++ +DP VAR Y + E + + ++ V G+ S+
Sbjct: 18 VEGLTALYNDPAVARQVLQMPYQSVEQRRKRLHDSADDDRLLILVALHQGDVIGSASLEQ 77
Query: 87 -----RPNSGNDMCRAELGYVLASKYWGKGIATQAVKIVTKTIFDEWPHLERLEAVVDVE 141
R +SG+ +G +A + GKG+ ++ + + I D W +L R+E V +
Sbjct: 78 HPRIRRSHSGS------IGMGVAVAWQGKGVGSRLLGELLD-IADNWMNLRRVELTVYTD 130
Query: 142 NVASQRVLEKAGFKREGVLGKYFIMKGSTKDMVVFSLL 179
N + + K GF+ EG + Y + G D+ + L
Sbjct: 131 NAPALALYRKFGFETEGEMRDYAVRDGRFVDVYSMARL 168
>pdb|2ZW4|A Chain A, Crystal Structure Of Bleomycin N-Acetyltransferase
Complexed With Coenzyme A In The Orthorhombic Crystal
pdb|2ZW4|B Chain B, Crystal Structure Of Bleomycin N-Acetyltransferase
Complexed With Coenzyme A In The Orthorhombic Crystal
pdb|2ZW4|C Chain C, Crystal Structure Of Bleomycin N-Acetyltransferase
Complexed With Coenzyme A In The Orthorhombic Crystal
pdb|2ZW4|D Chain D, Crystal Structure Of Bleomycin N-Acetyltransferase
Complexed With Coenzyme A In The Orthorhombic Crystal
pdb|2ZW7|A Chain A, Crystal Structure Of Bleomycin N-Acetyltransferase
Complexed With Bleomycin A2 And Coenzyme A
pdb|2ZW7|B Chain B, Crystal Structure Of Bleomycin N-Acetyltransferase
Complexed With Bleomycin A2 And Coenzyme A
Length = 301
Score = 33.9 bits (76), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 99 LGYVLASKYWGKGIATQAVKIVTKTIFDEWPHLERLEAVVDVENVASQRVLEKAGFKREG 158
L ++L WG G AT+A V ++ L+R+EA ++ N S V + G
Sbjct: 95 LTWLLRRDSWGHGYATEAAAAVVGHALEDG-GLDRVEAWIEAGNRRSLAVAARVGLTERA 153
Query: 159 VLGKYFIMKGSTKDMVVFS 177
L +++ + + VV
Sbjct: 154 RLAQHYPHRPGPHEXVVLG 172
>pdb|3EG7|A Chain A, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|B Chain B, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|C Chain C, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|D Chain D, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|E Chain E, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|F Chain F, Spermidine N1-Acetyltransferase From Vibrio Cholerae
Length = 176
Score = 33.5 bits (75), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 97 AELGYVLASKYWGKGIATQAVKIVTKTIFDEWPHLERLEAVVDVENVASQRVLEKAGFKR 156
AE ++A ++ GKG A + F +L ++ V VEN + + E+ GF
Sbjct: 86 AEFQIIIAPEHQGKGFARTLINRALDYSFT-ILNLHKIYLHVAVENPKAVHLYEECGFVE 144
Query: 157 EGVLGKYFIMKGSTKDM 173
EG L + F + G +D+
Sbjct: 145 EGHLVEEFFINGRYQDV 161
>pdb|1S7F|A Chain A, Riml- Ribosomal L7L12 ALPHA-N-Protein Acetyltransferase
Crystal Form I (Apo)
Length = 199
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 97 AELGYVLASKYWGKGIATQAVKIVTKTIFDEWPHLERLEAVVDVENVASQRVLEKAGFKR 156
A +GY L + G+GI +Q+++ + T + + R V+N AS V + F
Sbjct: 114 AYIGYWLDESFQGQGIMSQSLQALM-THYARRGDIRRFVIKCRVDNQASNAVARRNHFTL 172
Query: 157 EGVLGKYFIMKGSTKDMVVFS 177
EG + + + G D+ +++
Sbjct: 173 EGCMKQAEYLNGDYHDVNMYA 193
>pdb|1Z9U|A Chain A, Structural Genomics, The Crystal Structure Of The Acetyl
Transferase, Modifies N-Terminal Serine Of 50s Ribosomal
Subunit Protein L7L12 From Salmonella Typhimurium
pdb|1Z9U|B Chain B, Structural Genomics, The Crystal Structure Of The Acetyl
Transferase, Modifies N-Terminal Serine Of 50s Ribosomal
Subunit Protein L7L12 From Salmonella Typhimurium
Length = 179
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 97 AELGYVLASKYWGKGIATQAVKIVTKTIFDEWPHLERLEAVVDVENVASQRVLEKAGFKR 156
A +GY L + G+GI +Q+++ + T + + R V+N AS V + F
Sbjct: 94 AYIGYWLDESFQGQGIMSQSLQALM-THYARRGDIRRFVIKCRVDNQASNAVARRNHFTL 152
Query: 157 EGVLGKYFIMKGSTKDMVVFS 177
EG + + + G D+ +++
Sbjct: 153 EGCMKQAEYLNGDYHDVNMYA 173
>pdb|3QB8|A Chain A, Paramecium Chlorella Bursaria Virus1 Putative Orf A654l Is
A Polyamine Acetyltransferase
pdb|3QB8|B Chain B, Paramecium Chlorella Bursaria Virus1 Putative Orf A654l Is
A Polyamine Acetyltransferase
Length = 197
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 101 YVLASKYWGKGIATQAVKIVTKTIFDEWPHLERLEAVVDVENVASQRVLEKAGFKREG 158
+ + S+ GKG+AT K++ KTI + H + D N+ SQ + EK GF+ G
Sbjct: 113 FAIGSEVTGKGLAT---KLLKKTIEESSSHGFKY-IYGDCTNIISQNMFEKHGFETVG 166
>pdb|1S7K|A Chain A, Riml- Ribosomal L7L12 ALPHA-N-Protein Acetyltransferase
Crystal Form 2 (Apo)
pdb|1S7L|A Chain A, Riml- Ribosomal L7L12 ALPHA-N-Protein Acetyltransferase In
Complex With Coenzyme A (Coa-Cys134 Disulfide)
pdb|1S7N|A Chain A, Ribosomal L7L12 ALPHA-N-Protein Acetyltransferase In
Complex With Coenzyme A (Coa Free Sulfhydryl)
pdb|1S7N|B Chain B, Ribosomal L7L12 ALPHA-N-Protein Acetyltransferase In
Complex With Coenzyme A (Coa Free Sulfhydryl)
pdb|1S7N|C Chain C, Ribosomal L7L12 ALPHA-N-Protein Acetyltransferase In
Complex With Coenzyme A (Coa Free Sulfhydryl)
pdb|1S7N|D Chain D, Ribosomal L7L12 ALPHA-N-Protein Acetyltransferase In
Complex With Coenzyme A (Coa Free Sulfhydryl)
Length = 182
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 97 AELGYVLASKYWGKGIATQAVKIVTKTIFDEWPHLERLEAVVDVENVASQRVLEKAGFKR 156
A +GY L + G+GI +Q+++ + T + + R V+N AS V + F
Sbjct: 97 AYIGYWLDESFQGQGIMSQSLQALM-THYARRGDIRRFVIKCRVDNQASNAVARRNHFTL 155
Query: 157 EGVLGKYFIMKGSTKDMVVFS 177
EG + + + G D+ +++
Sbjct: 156 EGCMKQAEYLNGDYHDVNMYA 176
>pdb|3IWG|A Chain A, Acetyltransferase From Gnat Family From Colwellia
Psychrerythraea.
pdb|3IWG|B Chain B, Acetyltransferase From Gnat Family From Colwellia
Psychrerythraea
Length = 276
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 97 AELGYVLASKYWGKGIATQAVKIVTKTIFDEWPHLERLEAVVDVE--NVASQRVLEKAGF 154
A+LG ++A G+GIA + + +TK + L ++ E NVA+Q+ + AGF
Sbjct: 208 ADLGXIVAQSNRGQGIAKKVLTFLTK-----HAATQGLTSICSTESNNVAAQKAIAHAGF 262
>pdb|3PZJ|A Chain A, Crystal Structure Of A Probable Acetyltransferases (Gnat
Family) From Chromobacterium Violaceum Atcc 12472
pdb|3PZJ|B Chain B, Crystal Structure Of A Probable Acetyltransferases (Gnat
Family) From Chromobacterium Violaceum Atcc 12472
Length = 209
Score = 30.0 bits (66), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 112 IATQAVKIVTKTIFDEWPHLERLEAVVDVENVASQRVLEKAGFKREGVLGKYFIMKGSTK 171
+AT+AV ++ KT F+ R E D N AS + GF+ EG L + ++K +
Sbjct: 136 LATEAVFLLLKTAFEL--GYRRCEWRCDSRNAASAAAARRFGFQFEGTLRQAXVVKRRNR 193
Query: 172 DMVVFSLL 179
D VFS L
Sbjct: 194 DTHVFSXL 201
>pdb|1YRE|A Chain A, Hypothetical Protein Pa3270 From Pseudomonas Aeruginosa In
Complex With Coa
pdb|1YRE|B Chain B, Hypothetical Protein Pa3270 From Pseudomonas Aeruginosa In
Complex With Coa
pdb|1YRE|C Chain C, Hypothetical Protein Pa3270 From Pseudomonas Aeruginosa In
Complex With Coa
pdb|1YRE|D Chain D, Hypothetical Protein Pa3270 From Pseudomonas Aeruginosa In
Complex With Coa
Length = 197
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 98 ELGYV-LASKYWGKGIATQAVKIVTKTIFDEWPHLERLEAVVDVENVASQRVLEKAGFKR 156
E+G+ L G G+ ++ K FD + R++ N+ +Q ++K G +R
Sbjct: 98 EIGWTWLDQAQHGSGLNRMIKYLMLKHAFDNL-RMVRVQLSTAASNLRAQGAIDKLGAQR 156
Query: 157 EGVLGKY-FIMKGSTKDMVVFSL 178
EGVL + + G D V+S+
Sbjct: 157 EGVLRNHRRLAGGRLDDTFVYSI 179
>pdb|3OWC|A Chain A, Crystal Structure Of Gnat Superfamily Protein Pa2578 From
Pseudomonas Aeruginosa
pdb|3OWC|B Chain B, Crystal Structure Of Gnat Superfamily Protein Pa2578 From
Pseudomonas Aeruginosa
Length = 188
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 75 CVNNRPVGATSVRPNSGNDMCRAELGYVLASKYWGKGIATQAVKIVTKTIFDEWPHLERL 134
C +++ +G + + N + R VLA G+G+ ++ + F + +ER+
Sbjct: 74 CRDDQVIGHCQLLFDRRNGVVRLAR-IVLAPSARGQGLGLPXLEALLAEAFAD-ADIERV 131
Query: 135 EAVVDVENVASQRVLEKAGFKREGV 159
E V N A++ + +AGF+ EG+
Sbjct: 132 ELNVYDWNAAARHLYRRAGFREEGL 156
>pdb|2XQO|A Chain A, Ctcel124: A Cellulase From Clostridium Thermocellum
Length = 243
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 31 DDFMVWVSDPKVARFCPWESY 51
DD W +DP+V R PWE Y
Sbjct: 222 DDEFTWDTDPRVDRSNPWEIY 242
>pdb|3LD2|A Chain A, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|B Chain B, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|C Chain C, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|D Chain D, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
Length = 197
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 99 LGYVLASKYWGKGIATQAVKIVTKTIFDEWPHLERLEAVVDVENVASQRVL--EKAGFKR 156
G +A K KGI V+I + ++ + ++ V + + VL +K GF
Sbjct: 113 FGIAVAEKERRKGIGRALVQIFLNEVKSDYQ-----KVLIHVLSSNQEAVLFYKKLGFDL 167
Query: 157 EGVLGKYFIMKGSTKDMVVFS 177
E L K F +KG D +++S
Sbjct: 168 EARLTKQFFLKGQYVDDLIYS 188
>pdb|3DNS|A Chain A, The N-Terminal Domain Of Ribosomal-Protein-Alanine
Acetyltransferase From Clostridium Acetobutylicum Atcc
824
pdb|3DNS|B Chain B, The N-Terminal Domain Of Ribosomal-Protein-Alanine
Acetyltransferase From Clostridium Acetobutylicum Atcc
824
Length = 135
Score = 27.3 bits (59), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 109 GKGIATQAVKIVTKTIFDEW----PHLERLEAVVDVENVASQRVLEKAGFKREGVLGKYF 164
GK I T +I++ +F E+ + ++ +VD E V++Q +E GF EG++ K
Sbjct: 57 GKSINTYIKEILS--VFXEFLFKSNDINKVNIIVD-EEVSTQPFVE-LGFAFEGIINKSI 112
Query: 165 IMKGSTKDMVVF 176
I K KD +F
Sbjct: 113 IEKNVLKDEFLF 124
>pdb|3KX2|B Chain B, Crystal Structure Of Prp43p In Complex With Adp
pdb|3KX2|A Chain A, Crystal Structure Of Prp43p In Complex With Adp
Length = 767
Score = 26.6 bits (57), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 109 GKGIATQAVKIVTKTIFDEWPHLERLE-AVVDVENVASQRVLEKAGFKREGVLGK 162
G G TQ + V +FDE PHLE + A VA+ V ++ + + LG+
Sbjct: 119 GSGKTTQIPQFV---LFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGE 170
>pdb|2XAU|A Chain A, Crystal Structure Of The Prp43p Deah-Box Rna Helicase In
Complex With Adp
pdb|2XAU|B Chain B, Crystal Structure Of The Prp43p Deah-Box Rna Helicase In
Complex With Adp
Length = 773
Score = 26.6 bits (57), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 109 GKGIATQAVKIVTKTIFDEWPHLERLE-AVVDVENVASQRVLEKAGFKREGVLGK 162
G G TQ + V +FDE PHLE + A VA+ V ++ + + LG+
Sbjct: 119 GSGKTTQIPQFV---LFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGE 170
>pdb|3KEB|A Chain A, Thiol Peroxidase From Chromobacterium Violaceum
pdb|3KEB|B Chain B, Thiol Peroxidase From Chromobacterium Violaceum
pdb|3KEB|C Chain C, Thiol Peroxidase From Chromobacterium Violaceum
pdb|3KEB|D Chain D, Thiol Peroxidase From Chromobacterium Violaceum
Length = 224
Score = 26.6 bits (57), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 14/71 (19%)
Query: 121 TKTIFDEWPHLERLEAVVD-------------VENVASQRVLEKAGF-KREGVLGKYFIM 166
T+ D WPHL+ + VD + N+A L F KR GVL + +
Sbjct: 73 TRRFLDSWPHLKLIVITVDSPSSLARARHEHGLPNIALLSTLRGRDFHKRYGVLITEYPL 132
Query: 167 KGSTKDMVVFS 177
G T ++ +
Sbjct: 133 SGYTSPAIILA 143
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,483,496
Number of Sequences: 62578
Number of extensions: 213669
Number of successful extensions: 409
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 387
Number of HSP's gapped (non-prelim): 31
length of query: 185
length of database: 14,973,337
effective HSP length: 93
effective length of query: 92
effective length of database: 9,153,583
effective search space: 842129636
effective search space used: 842129636
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (23.1 bits)