BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047586
(179 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P83326|PMEI_ACTDE Pectinesterase inhibitor OS=Actinidia deliciosa GN=PMEI PE=1 SV=2
Length = 185
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 6/169 (3%)
Query: 10 FIILLSTIPAISPSSVNVSENDIEDLCKNTIDAQFCVKVLKSDPRTPKADFEGLTQISID 69
FI LS P SV + I ++C T + C++ L+SDPR+ D +GL Q SID
Sbjct: 20 FISPLSQRP-----SVKAENHLISEICPKTRNPSLCLQALESDPRSASKDLKGLGQFSID 74
Query: 70 LSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIKYLRGIY 129
++++ +TS ++ASL T L K RY C Y +++ + A + L +
Sbjct: 75 IAQASAKQTSKIIASLTNQATDPKL-KGRYETCSENYADAIDSLGQAKQFLTSGDYNSLN 133
Query: 130 MAILSSKVAAGACTREFETPPADKSGLIERNRKLRIYGQIIVLASVLMP 178
+ ++ AG C FE PP + L + + KL I+++ S L+P
Sbjct: 134 IYASAAFDGAGTCEDSFEGPPNIPTQLHQADLKLEDLCDIVLVISNLLP 182
>sp|Q9LUV1|PMEI2_ARATH Pectinesterase inhibitor 2 OS=Arabidopsis thaliana GN=PMEI2 PE=1
SV=1
Length = 173
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 78/166 (46%), Gaps = 1/166 (0%)
Query: 11 IILLSTIPAISPSSVNVSENDIEDLCKNTIDAQFCVKVLKSDPRTPKADFEGLTQISIDL 70
+++ S + + S+N DI+ +C + FC +KS+P+T AD + L I+
Sbjct: 9 VLMSSLMFFVMTGSLNAQVADIKAICGKAKNQSFCTSYMKSNPKTSGADLQTLANITFGS 68
Query: 71 SRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIKYLRGIYM 130
+++ E + SL K T + MK Y++C+ Y +++ + A + L +G+ +
Sbjct: 69 AQTSASEGFRKIQSLVKTAT-NPTMKKAYTSCVQHYKSAISSLNDAKQSLASGDGKGLNI 127
Query: 131 AILSSKVAAGACTREFETPPADKSGLIERNRKLRIYGQIIVLASVL 176
+ ++ C ++ D S + I G ++V+++++
Sbjct: 128 KVSAAMEGPSTCEQDMADFKVDPSAVKNSGDFQNICGIVLVISNMM 173
>sp|O49603|CVIF2_ARATH Cell wall / vacuolar inhibitor of fructosidase 2 OS=Arabidopsis
thaliana GN=C/VIF2 PE=1 SV=1
Length = 180
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 8 ASFIILLSTIPAISPSSVNVSEND----IEDLCKNTIDAQFCVKVLKSDPRTPKADFEGL 63
+S I LL S S++ ++++ IE CK T +FCV LKSDPR+P AD +GL
Sbjct: 3 SSLIFLLLVTLTFSASTLISAKSNTTTIIESTCKTTNYYKFCVSALKSDPRSPTADTKGL 62
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYG 107
I + + + T+ +A + ++K C +Y
Sbjct: 63 ASIMVGVGMTNATSTANYIAGNLSATVKDTVLKKVLQDCSEKYA 106
>sp|F4HWQ8|CVIF1_ARATH Cell wall / vacuolar inhibitor of fructosidase 1 OS=Arabidopsis
thaliana GN=C/VIF1 PE=1 SV=1
Length = 205
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Query: 32 IEDLCKNTIDAQFCVKVLKSDPRTPKADFEGLTQISIDLSRSFVLETSAMLASLAKNDTQ 91
IE CK T D CV +L SDPR AD GL I ID + +T + L K +
Sbjct: 26 IEPTCKETPDFNLCVSLLNSDPRGSSADTSGLALILIDKIKGLATKTLNEINGLYKKRPE 85
Query: 92 SALMKSRYSACLMQYGRSLN-DMEYANECLKIKYLRGIYMAILSSKVAAGACTREF 146
+K C +Y LN D+ A E + + ++ + V A C F
Sbjct: 86 ---LKRALDECSRRYKTILNADVPEAIEAISKGVPKFGEDGVIDAGVEASVCQGGF 138
>sp|Q8GT41|PLA1_PLAAC Putative invertase inhibitor OS=Platanus acerifolia PE=1 SV=1
Length = 179
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 27 VSENDIEDLCKN------TIDAQFCVKVLKSDPRTPKADFEGLTQISIDLSRSFVLETSA 80
+S + ++ CK ++ FCVK L +DP++ AD +GL IS +L+ +
Sbjct: 22 ISADIVQGTCKKVAQRSPNVNYDFCVKSLGADPKSHTADLQGLGVISANLAIQHGSKIQT 81
Query: 81 MLASLAKNDTQSALMK 96
+ + K+ AL K
Sbjct: 82 FIGRILKSKVDPALKK 97
>sp|Q07970|ATK1_ARATH Kinesin-1 OS=Arabidopsis thaliana GN=ATK1 PE=2 SV=1
Length = 793
Score = 33.1 bits (74), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 15/89 (16%)
Query: 53 PRTPKADFEGLTQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLN- 111
PR+P A EGL IS D R K +TQ + + + + + ++N
Sbjct: 10 PRSPNAKKEGLGGISFDKRR--------------KVETQGGTGRRQAFSAVNKQDVTMNS 55
Query: 112 DMEYANECLKIKYLRGIYMAILSSKVAAG 140
D+ EC K+ + + +A+LS + AG
Sbjct: 56 DVGSIEECGKVDFTKDEILALLSERAKAG 84
>sp|O13527|YA11B_YEAST Truncated transposon Ty1-A Gag-Pol polyprotein OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TY1B-A PE=1
SV=3
Length = 1196
Score = 32.7 bits (73), Expect = 1.5, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 10/105 (9%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N +K +Y ++ G S N+++Y L+IK
Sbjct: 859 SQVTICL---FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 915
Query: 124 YLRGIYMAILSSKVAAGACTREFETPPADKSGLIERNRKLRIYGQ 168
Y RG YM + K E P L + +KLR GQ
Sbjct: 916 YQRGKYMKLGMEKSLT-------EKLPKLNVPLNPKGKKLRAPGQ 953
>sp|Q99231|YD12B_YEAST Transposon Ty1-DR3 Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-DR3 PE=1 SV=2
Length = 1755
Score = 32.3 bits (72), Expect = 1.5, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 10/105 (9%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N +K +Y ++ G S N+++Y L+IK
Sbjct: 1418 SQVTICL---FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1474
Query: 124 YLRGIYMAILSSKVAAGACTREFETPPADKSGLIERNRKLRIYGQ 168
Y RG YM + K E P L + +KLR GQ
Sbjct: 1475 YQRGKYMKLGMEKSLT-------EKLPKLNVPLNPKGKKLRAPGQ 1512
>sp|P0C2J0|YP13B_YEAST Transposon Ty1-PR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-PR2 PE=1 SV=1
Length = 1756
Score = 31.2 bits (69), Expect = 3.8, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N +K +Y ++ G S N+++Y L+IK
Sbjct: 1419 SQVTICL---FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1475
Query: 124 YLRGIYMAI 132
Y RG YM +
Sbjct: 1476 YQRGKYMKL 1484
>sp|P0C2I2|YD14B_YEAST Transposon Ty1-DR5 Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-DR5 PE=1 SV=1
Length = 1755
Score = 31.2 bits (69), Expect = 3.8, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N +K +Y ++ G S N+++Y L+IK
Sbjct: 1418 SQVTICL---FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1474
Query: 124 YLRGIYMAI 132
Y RG YM +
Sbjct: 1475 YQRGKYMKL 1483
>sp|O13535|YH11B_YEAST Transposon Ty1-H Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-H PE=1 SV=1
Length = 1793
Score = 31.2 bits (69), Expect = 3.9, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N +K +Y ++ G S N+++Y L+IK
Sbjct: 1456 SQVTICL---FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1512
Query: 124 YLRGIYMAI 132
Y RG YM +
Sbjct: 1513 YQRGKYMKL 1521
>sp|Q03619|YE12B_YEAST Transposon Ty1-ER2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-ER2 PE=1 SV=1
Length = 1755
Score = 31.2 bits (69), Expect = 4.0, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N +K +Y ++ G S N+++Y L+IK
Sbjct: 1418 SQVTICL---FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1474
Query: 124 YLRGIYMAI 132
Y RG YM +
Sbjct: 1475 YQRGKYMKL 1483
>sp|P0C2J1|YP14B_YEAST Transposon Ty1-PR3 Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-PR3 PE=3 SV=1
Length = 1755
Score = 31.2 bits (69), Expect = 4.0, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N +K +Y ++ G S N+++Y L+IK
Sbjct: 1418 SQVTICL---FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1474
Query: 124 YLRGIYMAI 132
Y RG YM +
Sbjct: 1475 YQRGKYMKL 1483
>sp|P0C2I9|YP12B_YEAST Transposon Ty1-PR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-PR1 PE=2 SV=1
Length = 1755
Score = 31.2 bits (69), Expect = 4.0, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N +K +Y ++ G S N+++Y L+IK
Sbjct: 1418 SQVTICL---FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1474
Query: 124 YLRGIYMAI 132
Y RG YM +
Sbjct: 1475 YQRGKYMKL 1483
>sp|Q04670|YM14B_YEAST Transposon Ty1-MR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-MR2 PE=1 SV=2
Length = 1755
Score = 31.2 bits (69), Expect = 4.0, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N +K +Y ++ G S N+++Y L+IK
Sbjct: 1418 SQVTICL---FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1474
Query: 124 YLRGIYMAI 132
Y RG YM +
Sbjct: 1475 YQRGKYMKL 1483
>sp|Q04711|YM11B_YEAST Transposon Ty1-ML1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-ML1 PE=2 SV=2
Length = 1755
Score = 31.2 bits (69), Expect = 4.0, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N +K +Y ++ G S N+++Y L+IK
Sbjct: 1418 SQVTICL---FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1474
Query: 124 YLRGIYMAI 132
Y RG YM +
Sbjct: 1475 YQRGKYMKL 1483
>sp|Q12088|YL11B_YEAST Transposon Ty1-LR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-LR1 PE=1 SV=1
Length = 1755
Score = 31.2 bits (69), Expect = 4.0, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N +K +Y ++ G S N+++Y L+IK
Sbjct: 1418 SQVTICL---FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1474
Query: 124 YLRGIYMAI 132
Y RG YM +
Sbjct: 1475 YQRGKYMKL 1483
>sp|Q12269|YG12B_YEAST Transposon Ty1-GR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-GR2 PE=3 SV=3
Length = 1755
Score = 31.2 bits (69), Expect = 4.0, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N +K +Y ++ G S N+++Y L+IK
Sbjct: 1418 SQVTICL---FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1474
Query: 124 YLRGIYMAI 132
Y RG YM +
Sbjct: 1475 YQRGKYMKL 1483
>sp|P0C2I6|YL13B_YEAST Transposon Ty1-LR3 Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-LR3 PE=1 SV=1
Length = 1755
Score = 31.2 bits (69), Expect = 4.1, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N +K +Y ++ G S N+++Y L+IK
Sbjct: 1418 SQVTICL---FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1474
Query: 124 YLRGIYMAI 132
Y RG YM +
Sbjct: 1475 YQRGKYMKL 1483
>sp|P47098|YJ11B_YEAST Transposon Ty1-JR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-JR1 PE=1 SV=3
Length = 1755
Score = 31.2 bits (69), Expect = 4.1, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N +K +Y ++ G S N+++Y L+IK
Sbjct: 1418 SQVTICL---FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1474
Query: 124 YLRGIYMAI 132
Y RG YM +
Sbjct: 1475 YQRGKYMKL 1483
>sp|Q03434|YM12B_YEAST Transposon Ty1-ML2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-ML2 PE=3 SV=2
Length = 1755
Score = 30.8 bits (68), Expect = 4.4, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N +K +Y ++ G S N+++Y L+IK
Sbjct: 1418 SQVTICL---FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1474
Query: 124 YLRGIYMAI 132
Y RG YM +
Sbjct: 1475 YQRGKYMKL 1483
>sp|Q12414|YP11B_YEAST Transposon Ty1-PL Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-PL PE=3 SV=1
Length = 1755
Score = 30.8 bits (68), Expect = 4.4, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N +K +Y ++ G S N+++Y L+IK
Sbjct: 1418 SQVTICL---FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1474
Query: 124 YLRGIYMAI 132
Y RG YM +
Sbjct: 1475 YQRGKYMKL 1483
>sp|Q12273|YO11B_YEAST Transposon Ty1-OL Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-OL PE=2 SV=1
Length = 1755
Score = 30.8 bits (68), Expect = 4.4, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N +K +Y ++ G S N+++Y L+IK
Sbjct: 1418 SQVTICL---FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1474
Query: 124 YLRGIYMAI 132
Y RG YM +
Sbjct: 1475 YQRGKYMKL 1483
>sp|P0C2I5|YL12B_YEAST Transposon Ty1-LR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-LR2 PE=3 SV=1
Length = 1755
Score = 30.8 bits (68), Expect = 4.4, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N +K +Y ++ G S N+++Y L+IK
Sbjct: 1418 SQVTICL---FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1474
Query: 124 YLRGIYMAI 132
Y RG YM +
Sbjct: 1475 YQRGKYMKL 1483
>sp|Q03612|YE11B_YEAST Transposon Ty1-ER1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-ER1 PE=1 SV=1
Length = 1755
Score = 30.8 bits (68), Expect = 4.4, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N +K +Y ++ G S N+++Y L+IK
Sbjct: 1418 SQVTICL---FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIK 1474
Query: 124 YLRGIYMAI 132
Y RG YM +
Sbjct: 1475 YQRGKYMKL 1483
>sp|Q92393|YO12B_YEAST Transposon Ty1-OR Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-OR PE=1 SV=1
Length = 1755
Score = 30.0 bits (66), Expect = 9.0, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N A +K +Y ++ G S ++++Y L+IK
Sbjct: 1418 SQVTICL---FVDDMILFSKDLNSNKRIIAKLKMQYDTKIINLGESDDEIQYDILGLEIK 1474
Query: 124 YLRGIYMAI 132
Y RG YM +
Sbjct: 1475 YQRGKYMKL 1483
>sp|Q12316|YG13B_YEAST Transposon Ty1-GR3 Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-GR3 PE=1 SV=3
Length = 1755
Score = 30.0 bits (66), Expect = 9.3, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 64 TQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGRSLNDMEYANECLKIK 123
+Q++I L FV + L N A +K +Y ++ G S ++++Y L+IK
Sbjct: 1418 SQVTICL---FVDDMILFSKDLNSNKRIIAKLKMQYDTKIINLGESDDEIQYDILGLEIK 1474
Query: 124 YLRGIYMAI 132
Y RG YM +
Sbjct: 1475 YQRGKYMKL 1483
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.132 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,591,303
Number of Sequences: 539616
Number of extensions: 1815139
Number of successful extensions: 5034
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 5007
Number of HSP's gapped (non-prelim): 31
length of query: 179
length of database: 191,569,459
effective HSP length: 110
effective length of query: 69
effective length of database: 132,211,699
effective search space: 9122607231
effective search space used: 9122607231
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)