Query 047586
Match_columns 179
No_of_seqs 118 out of 871
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 22:16:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047586.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047586hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xg2_B Pectinesterase inhibito 100.0 6.1E-33 2.1E-37 203.8 17.8 146 29-178 3-151 (153)
2 2cj4_A Invertase inhibitor; pr 100.0 9.2E-33 3.1E-37 202.5 16.9 144 27-177 2-149 (150)
3 1x91_A Invertase/pectin methyl 100.0 3.4E-32 1.1E-36 200.0 14.0 145 28-178 4-151 (153)
4 1vh6_A Flagellar protein FLIS; 36.2 77 0.0026 22.0 5.3 29 55-83 17-45 (145)
5 3iqc_A FLIS, flagellar protein 31.9 84 0.0029 21.4 4.9 27 57-83 22-48 (131)
6 3arc_L Photosystem II reaction 23.4 51 0.0018 17.2 1.8 15 5-19 13-27 (37)
7 4ekf_A Adenain; alpha and beta 22.9 30 0.001 25.5 1.2 10 2-11 121-130 (204)
8 2w2u_A Hypothetical P60 katani 21.1 1.6E+02 0.0053 18.2 4.5 27 102-128 12-38 (83)
9 1orj_A Flagellar protein FLIS; 19.2 81 0.0028 21.5 2.8 23 103-125 23-45 (130)
10 3dxr_B Mitochondrial import in 18.9 1.9E+02 0.0066 18.4 4.4 31 90-121 56-86 (95)
No 1
>1xg2_B Pectinesterase inhibitor; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Actinidia chinensis}
Probab=100.00 E-value=6.1e-33 Score=203.76 Aligned_cols=146 Identities=30% Similarity=0.560 Sum_probs=137.3
Q ss_pred hhHHHHHhhcCCCcccHHHhhhcCCCCCCCCHHhHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHH
Q 047586 29 ENDIEDLCKNTIDAQFCVKVLKSDPRTPKADFEGLTQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYGR 108 (179)
Q Consensus 29 ~~~i~~~C~~t~~~~~C~~~L~s~p~s~~ad~~~L~~iai~~a~~~a~~~~~~i~~l~~~~~~~~~~k~aL~~C~~~y~~ 108 (179)
.+.|+.+|++|+||++|+++|.++|++..+|+++|+.++++.+..+++.+..+++++.++.++|+ .+.+|++|.++|++
T Consensus 3 ~~~i~~~C~~T~~~~~C~~sL~~~~~~~~~~~~~l~~~ai~~~~~~a~~~~~~~~~l~~~~~~~~-~~~al~dC~e~y~~ 81 (153)
T 1xg2_B 3 NHLISEICPKTRNPSLCLQALESDPRSASKDLKGLGQFSIDIAQASAKQTSKIIASLTNQATDPK-LKGRYETCSENYAD 81 (153)
T ss_dssp CHHHHHHGGGSSCHHHHHHHHHTCTTGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHH-HHHHHHHHHHHHHH
T ss_pred HhHHHHHhcCCCChHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHHHHHHHHHH
Confidence 57899999999999999999999999888899999999999999999999999999987767899 99999999999999
Q ss_pred HHHHHHHHHHHHHhcchHHH---HHHHHhchhchhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCC
Q 047586 109 SLNDMEYANECLKIKYLRGI---YMAILSSKVAAGACTREFETPPADKSGLIERNRKLRIYGQIIVLASVLMP 178 (179)
Q Consensus 109 a~~~l~~A~~~l~~~~~~~~---lsaa~t~~~~~~tC~d~f~~~~~~~~~l~~~~~~~~~l~s~alai~~~l~ 178 (179)
++++|++|+.+++.++|+++ +++|+++ ++||+|||++.+..++||..+++++.+|++|+|+|+++|+
T Consensus 82 a~~~L~~a~~~l~~~~~~d~~t~lSaAlt~---~~tC~dgf~~~~~~~~~l~~~~~~~~~l~s~aLai~~~l~ 151 (153)
T 1xg2_B 82 AIDSLGQAKQFLTSGDYNSLNIYASAAFDG---AGTCEDSFEGPPNIPTQLHQADLKLEDLCDIVLVISNLLP 151 (153)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH---HHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHhcc---cchHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999888877 9999999 9999999986544678999999999999999999999985
No 2
>2cj4_A Invertase inhibitor; protein binding, four-helix bundle, helical hairpin; 1.63A {Nicotiana tabacum} SCOP: a.29.6.1 PDB: 2cj5_A 2cj6_A 2cj7_A 2cj8_A 1rj1_A 1rj4_A* 2xqr_B*
Probab=100.00 E-value=9.2e-33 Score=202.46 Aligned_cols=144 Identities=22% Similarity=0.275 Sum_probs=134.0
Q ss_pred CChhHHHHHhhcCCCcccHHHhhhcCCCCCCCCHHhHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHH
Q 047586 27 VSENDIEDLCKNTIDAQFCVKVLKSDPRTPKADFEGLTQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQY 106 (179)
Q Consensus 27 ~~~~~i~~~C~~t~~~~~C~~~L~s~p~s~~ad~~~L~~iai~~a~~~a~~~~~~i~~l~~~~~~~~~~k~aL~~C~~~y 106 (179)
++.++|+.+|++|+||++|+++|.++|++..+|+++|++++++.+..+++.+..+++++.+..++|+ .+.+|++|.++|
T Consensus 2 a~~~~I~~~C~~T~~~~~C~~sL~~~~~s~~ad~~~la~~ai~~~~~~a~~~~~~i~~l~~~~~~~~-~~~al~dC~e~y 80 (150)
T 2cj4_A 2 AMNNLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSNPPAA-WKGPLKNCAFSY 80 (150)
T ss_dssp --CHHHHHHHHTSSCHHHHHHHHHTSGGGTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCGG-GHHHHHHHHHHH
T ss_pred CchHHHHHHHcCCCCccHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChH-HHHHHHHHHHHH
Confidence 3567999999999999999999999999988899999999999999999999999999987777899 999999999999
Q ss_pred HHHH-HHHHHHHHHHHhcchHHH---HHHHHhchhchhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcC
Q 047586 107 GRSL-NDMEYANECLKIKYLRGI---YMAILSSKVAAGACTREFETPPADKSGLIERNRKLRIYGQIIVLASVLM 177 (179)
Q Consensus 107 ~~a~-~~l~~A~~~l~~~~~~~~---lsaa~t~~~~~~tC~d~f~~~~~~~~~l~~~~~~~~~l~s~alai~~~l 177 (179)
++++ ++|++|+.+++.++|+++ +++|+++ ++||+|||++ .++||.+++.++.+|++|+|+|+++|
T Consensus 81 ~~a~~~~L~~a~~~l~~~~~~~~~t~lsaAlt~---~~tC~dgf~~---~~~pl~~~~~~~~~l~s~aLaii~~l 149 (150)
T 2cj4_A 81 KVILTASLPEAIEALTKGDPKFAEDGMVGSSGD---AQECEEYFKG---SKSPFSALNIAVHELSDVGRAIVRNL 149 (150)
T ss_dssp HHHHHTHHHHHHHHHHHSCHHHHHHHHHHHHHH---HHHHHHTTTT---SCCTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH---HHHHHHhhCC---CCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 9999 799999999999888877 9999999 9999999973 36789999999999999999999887
No 3
>1x91_A Invertase/pectin methylesterase inhibitor family protein; four-helix bundle, alpha hairpin, disulfide bridge, domain- swapping, linker; 1.50A {Arabidopsis thaliana} SCOP: a.29.6.1 PDB: 1x8z_A 1x90_A
Probab=100.00 E-value=3.4e-32 Score=199.98 Aligned_cols=145 Identities=20% Similarity=0.413 Sum_probs=134.1
Q ss_pred ChhHHHHHhhcCCCcccHHHhhhcCCCCCCCCHHhHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHH
Q 047586 28 SENDIEDLCKNTIDAQFCVKVLKSDPRTPKADFEGLTQISIDLSRSFVLETSAMLASLAKNDTQSALMKSRYSACLMQYG 107 (179)
Q Consensus 28 ~~~~i~~~C~~t~~~~~C~~~L~s~p~s~~ad~~~L~~iai~~a~~~a~~~~~~i~~l~~~~~~~~~~k~aL~~C~~~y~ 107 (179)
+.+.|+.+|++|+||++|+++| +|++..+|+++|++++++.+..++..+..+++.+.++.++|+ .+.+|++|.++|+
T Consensus 4 ~~~~i~~~C~~T~~~~~C~~sL--~p~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~l~~~~~~~~-~~~al~dC~e~y~ 80 (153)
T 1x91_A 4 DSSEMSTICDKTLNPSFCLKFL--NTKFASANLQALAKTTLDSTQARATQTLKKLQSIIDGGVDPR-SKLAYRSCVDEYE 80 (153)
T ss_dssp -CCSTTTGGGGSSCHHHHHHHH--HHTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHH
T ss_pred cHHHHHHHhCCCCChhHHHHHh--CcCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHHHHHHHHH
Confidence 4568999999999999999999 677777799999999999999999999999999987667899 9999999999999
Q ss_pred HHHHHHHHHHHHHHhcchHHH---HHHHHhchhchhhhhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCC
Q 047586 108 RSLNDMEYANECLKIKYLRGI---YMAILSSKVAAGACTREFETPPADKSGLIERNRKLRIYGQIIVLASVLMP 178 (179)
Q Consensus 108 ~a~~~l~~A~~~l~~~~~~~~---lsaa~t~~~~~~tC~d~f~~~~~~~~~l~~~~~~~~~l~s~alai~~~l~ 178 (179)
+++++|++++.+++.++|+++ +|+|+++ ++||+|||++.++.++||..++.++.+|++|+|+|+++|+
T Consensus 81 ~a~~~L~~a~~~l~~~~~~d~~t~lSaAlt~---~~tC~dgf~~~~~~~~~l~~~~~~~~~l~s~aLai~~~l~ 151 (153)
T 1x91_A 81 SAIGNLEEAFEHLASGDGMGMNMKVSAALDG---ADTCLDDVKRLRSVDSSVVNNSKTIKNLCGIALVISNMLP 151 (153)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---HHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHcc---HhHHHHHhccCCCCcCHHHHHhHHHHHHHHHHHHHHHHcc
Confidence 999999999999999888877 9999999 9999999986545788999999999999999999999986
No 4
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=36.19 E-value=77 Score=22.01 Aligned_cols=29 Identities=14% Similarity=0.063 Sum_probs=19.3
Q ss_pred CCCCCHHhHHHHHHHHHHHHHHHHHHHHH
Q 047586 55 TPKADFEGLTQISIDLSRSFVLETSAMLA 83 (179)
Q Consensus 55 s~~ad~~~L~~iai~~a~~~a~~~~~~i~ 83 (179)
..+++|.+|...-.+-++.....+...+.
T Consensus 17 v~tAsP~~Li~mLydgal~~l~~A~~aie 45 (145)
T 1vh6_A 17 VNTATPGELTLMLYNGCLKFIRLAAQAIE 45 (145)
T ss_dssp ---CCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44568888888888877777777765544
No 5
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=31.93 E-value=84 Score=21.35 Aligned_cols=27 Identities=7% Similarity=0.007 Sum_probs=19.4
Q ss_pred CCCHHhHHHHHHHHHHHHHHHHHHHHH
Q 047586 57 KADFEGLTQISIDLSRSFVLETSAMLA 83 (179)
Q Consensus 57 ~ad~~~L~~iai~~a~~~a~~~~~~i~ 83 (179)
+++|++|...-.+-++.....+...+.
T Consensus 22 tasP~~Li~mLydgal~~l~~A~~ai~ 48 (131)
T 3iqc_A 22 VESPAKLIEMLYEGILRFSSQAKRCIE 48 (131)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 558888888888877777777765544
No 6
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=23.42 E-value=51 Score=17.23 Aligned_cols=15 Identities=13% Similarity=0.102 Sum_probs=11.4
Q ss_pred hHHHHHHHHHHHHHh
Q 047586 5 QFCASFIILLSTIPA 19 (179)
Q Consensus 5 ~~~~~f~~lll~~l~ 19 (179)
.+-|||..|+++|.+
T Consensus 13 NRTSLy~GLLlifvl 27 (37)
T 3arc_L 13 NRTSLYLGLLLILVL 27 (37)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHH
Confidence 367899999888833
No 7
>4ekf_A Adenain; alpha and beta protein (A+B), hydrolase; HET: CSD; 0.98A {Human adenovirus 2} PDB: 1nln_A 1avp_A
Probab=22.93 E-value=30 Score=25.50 Aligned_cols=10 Identities=40% Similarity=0.810 Sum_probs=8.7
Q ss_pred chhhHHHHHH
Q 047586 2 ACLQFCASFI 11 (179)
Q Consensus 2 ~~~~~~~~f~ 11 (179)
||+.||.+|+
T Consensus 121 ACGLFC~lFL 130 (204)
T 4ekf_A 121 AAGLFCCMFL 130 (204)
T ss_dssp CHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 7999999994
No 8
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=21.07 E-value=1.6e+02 Score=18.21 Aligned_cols=27 Identities=11% Similarity=-0.213 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchHHH
Q 047586 102 CLMQYGRSLNDMEYANECLKIKYLRGI 128 (179)
Q Consensus 102 C~~~y~~a~~~l~~A~~~l~~~~~~~~ 128 (179)
+.+..+.|++-+.+|++.=+.|+|..+
T Consensus 12 ~~~~~~~Ai~lv~~Ave~D~~g~y~eA 38 (83)
T 2w2u_A 12 QVMLEEMARKYAINAVKADKEGNAEEA 38 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 566778888888888888888888877
No 9
>1orj_A Flagellar protein FLIS; flagellin, flagellar export, chaperone, flagellum, four HELI; 2.25A {Aquifex aeolicus} SCOP: a.24.19.1 PDB: 1ory_A
Probab=19.22 E-value=81 Score=21.46 Aligned_cols=23 Identities=17% Similarity=0.228 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcch
Q 047586 103 LMQYGRSLNDMEYANECLKIKYL 125 (179)
Q Consensus 103 ~~~y~~a~~~l~~A~~~l~~~~~ 125 (179)
..+|+.++..++.|...+..|++
T Consensus 23 ~mLydgai~~l~~A~~ai~~~d~ 45 (130)
T 1orj_A 23 ILLYDKAIECLERAIEIYDQVNE 45 (130)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTTS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCH
Confidence 34444444444444444444444
No 10
>3dxr_B Mitochondrial import inner membrane translocase subunit TIM10; alpha-propeller, helix-turn-helix, intramolecular disulfides., chaperone; 2.50A {Saccharomyces cerevisiae}
Probab=18.90 E-value=1.9e+02 Score=18.43 Aligned_cols=31 Identities=10% Similarity=0.085 Sum_probs=25.1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047586 90 TQSALMKSRYSACLMQYGRSLNDMEYANECLK 121 (179)
Q Consensus 90 ~~~~~~k~aL~~C~~~y~~a~~~l~~A~~~l~ 121 (179)
.+.. +..+++.|.+-|-++-..+.+.+..+.
T Consensus 56 L~~~-E~~Ci~~Cv~Ky~d~~~~V~~~~q~~~ 86 (95)
T 3dxr_B 56 LNKN-ESSCLDRCVAKYFETNVQVGENMQKMG 86 (95)
T ss_dssp CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCch-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667 899999999999999888887776544
Done!