BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047591
(1624 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 161 bits (407), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 159/581 (27%), Positives = 252/581 (43%), Gaps = 70/581 (12%)
Query: 138 RLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNE 197
L+ + +S N+ISG++ C LE DVSSN + +P LGDCS L+ L +S N+
Sbjct: 176 ELKHLAISGNKISGDVDVSRC---VNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNK 231
Query: 198 LTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRR 257
L+G + I TEL L ++ N G PP + SL+ + LA N G +P L
Sbjct: 232 LSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGA 289
Query: 258 LPSLQELNLRDCMTTGRIPKDIGNC--------------------TLLNYLGLRDNQLTD 297
+L L+L G +P G+C TLL GL+ + D
Sbjct: 290 CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLK---VLD 346
Query: 298 FGANNLTGLIPSIIFN-NSNIEVIQLYGNHLSGNLPSSTGINLPNLLR-LYLWGNNLSGV 355
N +G +P + N ++++ + L N+ SG + + N N L+ LYL N +G
Sbjct: 347 LSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGK 406
Query: 356 IPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAYSQLAXXXXXXXXXXXXXX 415
IP ++ N S+L L LS N SG + ++ G+ +L+ L L + L
Sbjct: 407 IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY----- 461
Query: 416 XNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIALSL 475
+ L L + N G +P+ + N + +L + + L G IP G L N+ L L
Sbjct: 462 --VKTLETLILDFNDLTGEIPSGLSNCT-NLNWISLSNNRLTGEIPKWIGRLENLAILKL 518
Query: 476 YQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQ---------LESLNTLLLQGN 526
N + IP +G ++L LDL+ N G+IP+ + + + + ++ +
Sbjct: 519 SNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKND 578
Query: 527 ALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLEY-------------ILVVDFSL 573
++ + P S Y ++ +D S
Sbjct: 579 GMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSY 638
Query: 574 NLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGFQGSIPEAIG 633
N+LSG +P++IG++ L L L N +S SIP +G L+ L L L+ N G IP+A+
Sbjct: 639 NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 698
Query: 634 SLISLEK---------GEIPSGGPFVNFTEGSFMQNYALCG 665
+L L + G IP G F F F+ N LCG
Sbjct: 699 ALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG 739
Score = 137 bits (344), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 192/421 (45%), Gaps = 59/421 (14%)
Query: 118 LNISGNRFHGTLPNELW-LMPRLRIIDLSSNRISGNLFDDMC-NSLTELESFDVSSNQIT 175
L++S N F G LP L L L +DLSSN SG + ++C N L+ + +N T
Sbjct: 345 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 404
Query: 176 GQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSS 235
G++P +L +CS+L L +SFN L+G IP ++G+L++L +L L N L+GE P + V +
Sbjct: 405 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 464
Query: 236 LRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQL 295
L ++L N L TG IP + NCT LN++ L +N+
Sbjct: 465 LETLILDFNDL-------------------------TGEIPSGLSNCTNLNWISLSNNR- 498
Query: 296 TDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGV 355
LTG IP I N+ +++L N SGN+P+ G + +L+ L L N +G
Sbjct: 499 -------LTGEIPKWIGRLENLAILKLSNNSFSGNIPAELG-DCRSLIWLDLNTNLFNGT 550
Query: 356 IPSSICNAS---KLTVLELSRNLF---SGLVANTFGNCRQLQILNLAYSQLAX------- 402
IP+++ S + R ++ G+ G L+ + QL
Sbjct: 551 IPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPC 610
Query: 403 --XXXXXXXXXXXXXXNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYA---GSCELG 457
N + +L + N G +P +G S+ Y + G ++
Sbjct: 611 NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIG----SMPYLFILNLGHNDIS 666
Query: 458 GGIPAEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLES 517
G IP E G+L + L L N+L IP + L L +DLS NN+ G IP E+ Q E+
Sbjct: 667 GSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP-EMGQFET 725
Query: 518 L 518
Sbjct: 726 F 726
Score = 127 bits (318), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 215/500 (43%), Gaps = 92/500 (18%)
Query: 107 PHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELES 166
P + + S L L+ISGN+ G + L+++++SSN+ G + L L+
Sbjct: 214 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPI---PPLPLKSLQY 270
Query: 167 FDVSSNQITGQLPSSL-GDCSKLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQGE 225
++ N+ TG++P L G C L L +S N G +P G+ + L L L+ NN GE
Sbjct: 271 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 330
Query: 226 FP-PTIFNVSSLRVIVLANNSLFGSLP------------VDLCRR------LP------- 259
P T+ + L+V+ L+ N G LP +DL LP
Sbjct: 331 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 390
Query: 260 -SLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIE 318
+LQEL L++ TG+IP + NC+ L L L N L+G IPS + + S +
Sbjct: 391 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS--------FNYLSGTIPSSLGSLSKLR 442
Query: 319 VIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSG 378
++L+ N L G +P + + L L L N+L+G IPS + N + L + LS N +G
Sbjct: 443 DLKLWLNMLEGEIPQEL-MYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTG 501
Query: 379 LVANTFGNCRQLQILNLAYSQLAXXXXXXXXXXXXXXXNCRYLRYLAIQTNPWKGILPNS 438
+ G L IL L+ + + +CR L +L + TN + G +P +
Sbjct: 502 EIPKWIGRLENLAILKLSNNSFS-------GNIPAELGDCRSLIWLDLNTNLFNGTIPAA 554
Query: 439 V--------GNLSKSLEYFY------------AGS--------------------CEL-- 456
+ N Y Y AG+ C +
Sbjct: 555 MFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITS 614
Query: 457 ---GGGIPAEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELC 513
GG F N +++ L + N L+ IP +G + L L+L +N+I GSIP E+
Sbjct: 615 RVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVG 674
Query: 514 QLESLNTLLLQGNALQNQIP 533
L LN L L N L +IP
Sbjct: 675 DLRGLNILDLSSNKLDGRIP 694
Score = 127 bits (318), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 149/515 (28%), Positives = 242/515 (46%), Gaps = 66/515 (12%)
Query: 144 LSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPS--SLGDCSKLKRLSVSFNELT-- 199
LS++ I+G++ C++ L S D+S N ++G + + SLG CS LK L+VS N L
Sbjct: 81 LSNSHINGSVSGFKCSA--SLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFP 138
Query: 200 GRIPQNIG-NLTELMELYLN---GNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLC 255
G++ + N E+++L N G N+ G L+ + ++ N + G + V C
Sbjct: 139 GKVSGGLKLNSLEVLDLSANSISGANVVGWVLSD--GCGELKHLAISGNKISGDVDVSRC 196
Query: 256 RRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLT-DFG--------------- 299
+L+ L++ + IP +G+C+ L +L + N+L+ DF
Sbjct: 197 V---NLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNIS 252
Query: 300 ANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSS 359
+N G IP + +++ + L N +G +P L L L GN+ G +P
Sbjct: 253 SNQFVGPIPPLPL--KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPF 310
Query: 360 ICNASKLTVLELSRNLFSG-LVANTFGNCRQLQILNLAYSQLAXXXXXXXXXXXXXXXNC 418
+ S L L LS N FSG L +T R L++L+L++++ +
Sbjct: 311 FGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSAS---- 366
Query: 419 RYLRYLAIQTNPWKG-ILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIALSLYQ 477
L L + +N + G ILPN N +L+ Y + G IP N S +++L L
Sbjct: 367 --LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSF 424
Query: 478 NQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNALQNQIPTCXX 537
N L+ TIP+++G L L+ L L N ++G IP EL +++L TL+L N L +IP+
Sbjct: 425 NYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL- 483
Query: 538 XXXXXXXXXXXXXXXXXXIPSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSG 597
S +L +I S N L+G +P+ IG L+ L L LS
Sbjct: 484 --------------------SNCTNLNWI---SLSNNRLTGEIPKWIGRLENLAILKLSN 520
Query: 598 NQLSCSIPSSIGGLKDLTYLALARNGFQGSIPEAI 632
N S +IP+ +G + L +L L N F G+IP A+
Sbjct: 521 NSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 156/331 (47%), Gaps = 15/331 (4%)
Query: 84 CGSRHGRVTDLSIPNLGLGGTIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIID 143
C + + +L + N G G IPP ++N S LVSL++S N GT+P+ L + +LR +
Sbjct: 386 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLK 445
Query: 144 LSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIP 203
L N + G + ++ + LE+ + N +TG++PS L +C+ L +S+S N LTG IP
Sbjct: 446 LWLNMLEGEIPQELM-YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 504
Query: 204 QNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQE 263
+ IG L L L L+ N+ G P + + SL + L N G++P + ++ +
Sbjct: 505 KWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAA 564
Query: 264 LNLRD-----CMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANN--------LTGLIPSI 310
+ G + G LL + G+R QL N G
Sbjct: 565 NFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPT 624
Query: 311 IFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLE 370
NN ++ + + N LSG +P G ++P L L L N++SG IP + + L +L+
Sbjct: 625 FDNNGSMMFLDMSYNMLSGYIPKEIG-SMPYLFILNLGHNDISGSIPDEVGDLRGLNILD 683
Query: 371 LSRNLFSGLVANTFGNCRQLQILNLAYSQLA 401
LS N G + L ++L+ + L+
Sbjct: 684 LSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 714
Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 181/434 (41%), Gaps = 46/434 (10%)
Query: 234 SSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMT-TGRIPKDIGNCTLLNYLGLRD 292
+SL + L+ NSL G PV L S L + + T P + LN L + D
Sbjct: 97 ASLTSLDLSRNSLSG--PVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLD 154
Query: 293 NQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNL 352
N+ G + S ++ + + GN +SG++ S +NL L + NN
Sbjct: 155 LSANSISGANVVGWVLSD--GCGELKHLAISGNKISGDVDVSRCVNLE---FLDVSSNNF 209
Query: 353 SGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAYSQLAXXXXXXXXXXX 412
S IP + + S L L++S N SG + C +L++LN++ +Q
Sbjct: 210 STGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPL--- 265
Query: 413 XXXXNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIA 472
+ L+YL++ N + G +P+ + +L G +P FG+ S + +
Sbjct: 266 ------KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLES 319
Query: 473 LSLYQNQLASTIP-TTVGKLQNLQGLDLSYNNIQGSIPSELCQLE--------------- 516
L+L N + +P T+ K++ L+ LDLS+N G +P L L
Sbjct: 320 LALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG 379
Query: 517 ------------SLNTLLLQGNALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLE 564
+L L LQ N +IP IPS+ SL
Sbjct: 380 PILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS 439
Query: 565 YILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGF 624
+ + LN+L G +PQ++ +K L L L N L+ IPS + +L +++L+ N
Sbjct: 440 KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRL 499
Query: 625 QGSIPEAIGSLISL 638
G IP+ IG L +L
Sbjct: 500 TGEIPKWIGRLENL 513
Score = 84.0 bits (206), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 95/205 (46%), Gaps = 33/205 (16%)
Query: 992 LKRLSISVNKITGTIPRTVGNLT-ELRELHLHGNNL-----------------EAYLYNN 1033
LK L +S N+ +G +P ++ NL+ L L L NN E YL NN
Sbjct: 342 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNN 401
Query: 1034 KFTGRIPQNLGNCTLLNFLILRQNQLTG--------------VRLASNKLIGRIPSMIFN 1079
FTG+IP L NC+ L L L N L+G ++L N L G IP +
Sbjct: 402 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY 461
Query: 1080 NSNIEAIQLYGNHFSGHLPSSIGPYLPNLQGLILWGNNLSGIIPSSICNASQVILLGLSE 1139
+E + L N +G +PS + NL + L N L+G IP I + +L LS
Sbjct: 462 VKTLETLILDFNDLTGEIPSGLS-NCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSN 520
Query: 1140 NLFSGLIPNTFGNCRQLQILDLSLN 1164
N FSG IP G+CR L LDL+ N
Sbjct: 521 NSFSGNIPAELGDCRSLIWLDLNTN 545
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 123/300 (41%), Gaps = 81/300 (27%)
Query: 992 LKRLSISVNKITGTIPRTVGNLTELRELHLHGNNLEA-------------YLYNNKFTGR 1038
L+ L IS NK++G R + TEL+ L++ N L NKFTG
Sbjct: 222 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGE 281
Query: 1039 IPQNLGNCTLLNFLILRQNQLTGVRLASNKLIGRIPSMIFNNSNIEAIQLYGNHFSGHLP 1098
IP +FL + LTG+ L+ N G +P + S +E++ L N+FSG LP
Sbjct: 282 IP---------DFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP 332
Query: 1099 SSI-------------------------------------------GPYLPN-------- 1107
GP LPN
Sbjct: 333 MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNT 392
Query: 1108 LQGLILWGNNLSGIIPSSICNASQVILLGLSENLFSGLIPNTFGNCRQLQILDLSLNHLT 1167
LQ L L N +G IP ++ N S+++ L LS N SG IP++ G+ +L+ L L LN L
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNML- 451
Query: 1168 TGSSTQGHSFYTSLTNCRYLRRLVLQNNPLKGALPNSIGNLSTSLEYFFASSTELRGAIP 1227
G Q L + L L+L N L G +P+ + N T+L + S+ L G IP
Sbjct: 452 EGEIPQ------ELMYVKTLETLILDFNDLTGEIPSGLSN-CTNLNWISLSNNRLTGEIP 504
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 83/157 (52%), Gaps = 20/157 (12%)
Query: 991 KLKRLSISVNKITGTIPRTVGNLTELRELHLHGNNLEAYLYNNKFTGRIPQNLGNCTLLN 1050
+L L +S N ++GTIP ++G+L++LR+L L N LE G IPQ L L
Sbjct: 416 ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE---------GEIPQELMYVKTLE 466
Query: 1051 FLILRQNQLTGVRLASNKLIGRIPSMIFNNSNIEAIQLYGNHFSGHLPSSIGPYLPNLQG 1110
LIL N LT G IPS + N +N+ I L N +G +P IG L NL
Sbjct: 467 TLILDFNDLT----------GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG-RLENLAI 515
Query: 1111 LILWGNNLSGIIPSSICNASQVILLGLSENLFSGLIP 1147
L L N+ SG IP+ + + +I L L+ NLF+G IP
Sbjct: 516 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 104/248 (41%), Gaps = 55/248 (22%)
Query: 992 LKRLSISVNKITGTIPRTVGNLTELRELHLHGNNLEAYLYNNKFTGRIPQNLGNCTLLNF 1051
L +S+S N++TG IP+ +G L L L L NN F+G IP LG+C L +
Sbjct: 489 LNWISLSNNRLTGEIPKWIGRLENLAILKLS---------NNSFSGNIPAELGDCRSLIW 539
Query: 1052 LILRQNQLTGV----------RLASNKLIGRIPSMIFNNS---------------NIEAI 1086
L L N G ++A+N + G+ I N+ I +
Sbjct: 540 LDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSE 599
Query: 1087 QLYGNHFSGHLPSSI---------GPYLPN---LQGLILWGNNLSGIIPSSICNASQVIL 1134
QL N S P +I P N + L + N LSG IP I + + +
Sbjct: 600 QL--NRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFI 657
Query: 1135 LGLSENLFSGLIPNTFGNCRQLQILDLSLNHLTTGSSTQGHSFYTSLTNCRYLRRLVLQN 1194
L L N SG IP+ G+ R L ILDLS N L G Q S T LT + L N
Sbjct: 658 LNLGHNDISGSIPDEVGDLRGLNILDLSSNKL-DGRIPQAMSALTMLT------EIDLSN 710
Query: 1195 NPLKGALP 1202
N L G +P
Sbjct: 711 NNLSGPIP 718
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 115/254 (45%), Gaps = 38/254 (14%)
Query: 991 KLKRLSISVNKITGTIPRTVGNLTELRELHLHGNNLEAYLYNNKFTGRIPQNLGNCTLLN 1050
+LK L+IS NKI+G + V L L + NN F+ IP LG+C+ L
Sbjct: 176 ELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNN---------FSTGIPF-LGDCSALQ 223
Query: 1051 FLILRQNQLTG--------------VRLASNKLIGRIPSMIFNNSNIEAIQLYGNHFSGH 1096
L + N+L+G + ++SN+ +G IP + +++ + L N F+G
Sbjct: 224 HLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPL--KSLQYLSLAENKFTGE 281
Query: 1097 LPSSIGPYLPNLQGLILWGNNLSGIIPSSICNASQVILLGLSENLFSGLIP-NTFGNCRQ 1155
+P + L GL L GN+ G +P + S + L LS N FSG +P +T R
Sbjct: 282 IPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRG 341
Query: 1156 LQILDLSLNHLTTGSSTQGHSFYTSLTN-CRYLRRLVLQNNPLKGA-LPNSIGNLSTSLE 1213
L++LDLS N + SLTN L L L +N G LPN N +L+
Sbjct: 342 LKVLDLSFNEFSG-------ELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 394
Query: 1214 YFFASSTELRGAIP 1227
+ + G IP
Sbjct: 395 ELYLQNNGFTGKIP 408
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 102 GGTIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSL 161
GG P N ++ L++S N G +P E+ MP L I++L N ISG++ D++ + L
Sbjct: 618 GGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGD-L 676
Query: 162 TELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQ 204
L D+SSN++ G++P ++ + L + +S N L+G IP+
Sbjct: 677 RGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 719
Score = 34.3 bits (77), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 79/207 (38%), Gaps = 56/207 (27%)
Query: 1043 LGNCTLLNFLILRQNQLTGVRLASNKLIGRIPSMIFNNSNIEAIQLYGNHFSGHLPSSIG 1102
LG+C+ L FL + N L G++ + NS +E + L N SG
Sbjct: 119 LGSCSGLKFLNVSSNTL--------DFPGKVSGGLKLNS-LEVLDLSANSISGA------ 163
Query: 1103 PYLPNLQGLILWGNNLSGIIPSSICNASQVILLGLSENLFSGLIPNTFGNCRQLQILDLS 1162
N+ G + S C ++ L +S N SG + C L+ LD+S
Sbjct: 164 --------------NVVGWVLSDGC--GELKHLAISGNKISGDV--DVSRCVNLEFLDVS 205
Query: 1163 LNHLTTGSSTQGHSFYTSLTNCRYLRRLVLQNNPLKGALPNSIGNLSTSLEYFFASSTEL 1222
N+ +TG L +C L+ L + N L G +I + T L+ SS +
Sbjct: 206 SNNFSTG--------IPFLGDCSALQHLDISGNKLSGDFSRAI-STCTELKLLNISSNQF 256
Query: 1223 RGAIPV--------------EFEGEIP 1235
G IP +F GEIP
Sbjct: 257 VGPIPPLPLKSLQYLSLAENKFTGEIP 283
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 160 bits (405), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 159/581 (27%), Positives = 252/581 (43%), Gaps = 70/581 (12%)
Query: 138 RLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNE 197
L+ + +S N+ISG++ C LE DVSSN + +P LGDCS L+ L +S N+
Sbjct: 179 ELKHLAISGNKISGDVDVSRC---VNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNK 234
Query: 198 LTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRR 257
L+G + I TEL L ++ N G PP + SL+ + LA N G +P L
Sbjct: 235 LSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGA 292
Query: 258 LPSLQELNLRDCMTTGRIPKDIGNC--------------------TLLNYLGLRDNQLTD 297
+L L+L G +P G+C TLL GL+ + D
Sbjct: 293 CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLK---VLD 349
Query: 298 FGANNLTGLIPSIIFN-NSNIEVIQLYGNHLSGNLPSSTGINLPNLLR-LYLWGNNLSGV 355
N +G +P + N ++++ + L N+ SG + + N N L+ LYL N +G
Sbjct: 350 LSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGK 409
Query: 356 IPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAYSQLAXXXXXXXXXXXXXX 415
IP ++ N S+L L LS N SG + ++ G+ +L+ L L + L
Sbjct: 410 IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY----- 464
Query: 416 XNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIALSL 475
+ L L + N G +P+ + N + +L + + L G IP G L N+ L L
Sbjct: 465 --VKTLETLILDFNDLTGEIPSGLSNCT-NLNWISLSNNRLTGEIPKWIGRLENLAILKL 521
Query: 476 YQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQ---------LESLNTLLLQGN 526
N + IP +G ++L LDL+ N G+IP+ + + + + ++ +
Sbjct: 522 SNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKND 581
Query: 527 ALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLEY-------------ILVVDFSL 573
++ + P S Y ++ +D S
Sbjct: 582 GMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSY 641
Query: 574 NLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGFQGSIPEAIG 633
N+LSG +P++IG++ L L L N +S SIP +G L+ L L L+ N G IP+A+
Sbjct: 642 NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 701
Query: 634 SLISLEK---------GEIPSGGPFVNFTEGSFMQNYALCG 665
+L L + G IP G F F F+ N LCG
Sbjct: 702 ALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG 742
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 192/421 (45%), Gaps = 59/421 (14%)
Query: 118 LNISGNRFHGTLPNELW-LMPRLRIIDLSSNRISGNLFDDMC-NSLTELESFDVSSNQIT 175
L++S N F G LP L L L +DLSSN SG + ++C N L+ + +N T
Sbjct: 348 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 407
Query: 176 GQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSS 235
G++P +L +CS+L L +SFN L+G IP ++G+L++L +L L N L+GE P + V +
Sbjct: 408 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 467
Query: 236 LRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQL 295
L ++L N L TG IP + NCT LN++ L +N+
Sbjct: 468 LETLILDFNDL-------------------------TGEIPSGLSNCTNLNWISLSNNR- 501
Query: 296 TDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGV 355
LTG IP I N+ +++L N SGN+P+ G + +L+ L L N +G
Sbjct: 502 -------LTGEIPKWIGRLENLAILKLSNNSFSGNIPAELG-DCRSLIWLDLNTNLFNGT 553
Query: 356 IPSSICNAS---KLTVLELSRNLF---SGLVANTFGNCRQLQILNLAYSQLAX------- 402
IP+++ S + R ++ G+ G L+ + QL
Sbjct: 554 IPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPC 613
Query: 403 --XXXXXXXXXXXXXXNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYA---GSCELG 457
N + +L + N G +P +G S+ Y + G ++
Sbjct: 614 NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIG----SMPYLFILNLGHNDIS 669
Query: 458 GGIPAEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLES 517
G IP E G+L + L L N+L IP + L L +DLS NN+ G IP E+ Q E+
Sbjct: 670 GSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP-EMGQFET 728
Query: 518 L 518
Sbjct: 729 F 729
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 215/500 (43%), Gaps = 92/500 (18%)
Query: 107 PHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELES 166
P + + S L L+ISGN+ G + L+++++SSN+ G + L L+
Sbjct: 217 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPI---PPLPLKSLQY 273
Query: 167 FDVSSNQITGQLPSSL-GDCSKLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQGE 225
++ N+ TG++P L G C L L +S N G +P G+ + L L L+ NN GE
Sbjct: 274 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 333
Query: 226 FP-PTIFNVSSLRVIVLANNSLFGSLP------------VDLCRR------LP------- 259
P T+ + L+V+ L+ N G LP +DL LP
Sbjct: 334 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 393
Query: 260 -SLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIE 318
+LQEL L++ TG+IP + NC+ L L L N L+G IPS + + S +
Sbjct: 394 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS--------FNYLSGTIPSSLGSLSKLR 445
Query: 319 VIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSG 378
++L+ N L G +P + + L L L N+L+G IPS + N + L + LS N +G
Sbjct: 446 DLKLWLNMLEGEIPQEL-MYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTG 504
Query: 379 LVANTFGNCRQLQILNLAYSQLAXXXXXXXXXXXXXXXNCRYLRYLAIQTNPWKGILPNS 438
+ G L IL L+ + + +CR L +L + TN + G +P +
Sbjct: 505 EIPKWIGRLENLAILKLSNNSFS-------GNIPAELGDCRSLIWLDLNTNLFNGTIPAA 557
Query: 439 V--------GNLSKSLEYFY------------AGS--------------------CEL-- 456
+ N Y Y AG+ C +
Sbjct: 558 MFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITS 617
Query: 457 ---GGGIPAEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELC 513
GG F N +++ L + N L+ IP +G + L L+L +N+I GSIP E+
Sbjct: 618 RVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVG 677
Query: 514 QLESLNTLLLQGNALQNQIP 533
L LN L L N L +IP
Sbjct: 678 DLRGLNILDLSSNKLDGRIP 697
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 150/520 (28%), Positives = 242/520 (46%), Gaps = 76/520 (14%)
Query: 144 LSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPS--SLGDCSKLKRLSVSFNELT-- 199
LS++ I+G++ C++ L S D+S N ++G + + SLG CS LK L+VS N L
Sbjct: 84 LSNSHINGSVSGFKCSA--SLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFP 141
Query: 200 GRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNV---------SSLRVIVLANNSLFGSL 250
G++ + L L L L+ N++ G NV L+ + ++ N + G +
Sbjct: 142 GKVSGGL-KLNSLEVLDLSANSISGA------NVVGWVLSDGCGELKHLAISGNKISGDV 194
Query: 251 PVDLCRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLT-DFG---------- 299
V C +L+ L++ + IP +G+C+ L +L + N+L+ DF
Sbjct: 195 DVSRCV---NLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELK 250
Query: 300 -----ANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSG 354
+N G IP + +++ + L N +G +P L L L GN+ G
Sbjct: 251 LLNISSNQFVGPIPPLPL--KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 308
Query: 355 VIPSSICNASKLTVLELSRNLFSG-LVANTFGNCRQLQILNLAYSQLAXXXXXXXXXXXX 413
+P + S L L LS N FSG L +T R L++L+L++++ +
Sbjct: 309 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 368
Query: 414 XXXNCRYLRYLAIQTNPWKG-ILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIA 472
L L + +N + G ILPN N +L+ Y + G IP N S +++
Sbjct: 369 S------LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVS 422
Query: 473 LSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNALQNQI 532
L L N L+ TIP+++G L L+ L L N ++G IP EL +++L TL+L N L +I
Sbjct: 423 LHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEI 482
Query: 533 PTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTG 592
P+ S +L +I S N L+G +P+ IG L+ L
Sbjct: 483 PSGL---------------------SNCTNLNWI---SLSNNRLTGEIPKWIGRLENLAI 518
Query: 593 LYLSGNQLSCSIPSSIGGLKDLTYLALARNGFQGSIPEAI 632
L LS N S +IP+ +G + L +L L N F G+IP A+
Sbjct: 519 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 156/331 (47%), Gaps = 15/331 (4%)
Query: 84 CGSRHGRVTDLSIPNLGLGGTIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIID 143
C + + +L + N G G IPP ++N S LVSL++S N GT+P+ L + +LR +
Sbjct: 389 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLK 448
Query: 144 LSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIP 203
L N + G + ++ + LE+ + N +TG++PS L +C+ L +S+S N LTG IP
Sbjct: 449 LWLNMLEGEIPQELM-YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507
Query: 204 QNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQE 263
+ IG L L L L+ N+ G P + + SL + L N G++P + ++ +
Sbjct: 508 KWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAA 567
Query: 264 LNLRD-----CMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANN--------LTGLIPSI 310
+ G + G LL + G+R QL N G
Sbjct: 568 NFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPT 627
Query: 311 IFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLE 370
NN ++ + + N LSG +P G ++P L L L N++SG IP + + L +L+
Sbjct: 628 FDNNGSMMFLDMSYNMLSGYIPKEIG-SMPYLFILNLGHNDISGSIPDEVGDLRGLNILD 686
Query: 371 LSRNLFSGLVANTFGNCRQLQILNLAYSQLA 401
LS N G + L ++L+ + L+
Sbjct: 687 LSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 181/434 (41%), Gaps = 46/434 (10%)
Query: 234 SSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMT-TGRIPKDIGNCTLLNYLGLRD 292
+SL + L+ NSL G PV L S L + + T P + LN L + D
Sbjct: 100 ASLTSLDLSRNSLSG--PVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLD 157
Query: 293 NQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNL 352
N+ G + S ++ + + GN +SG++ S +NL L + NN
Sbjct: 158 LSANSISGANVVGWVLSD--GCGELKHLAISGNKISGDVDVSRCVNLE---FLDVSSNNF 212
Query: 353 SGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAYSQLAXXXXXXXXXXX 412
S IP + + S L L++S N SG + C +L++LN++ +Q
Sbjct: 213 STGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPL--- 268
Query: 413 XXXXNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIA 472
+ L+YL++ N + G +P+ + +L G +P FG+ S + +
Sbjct: 269 ------KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLES 322
Query: 473 LSLYQNQLASTIP-TTVGKLQNLQGLDLSYNNIQGSIPSELCQLE--------------- 516
L+L N + +P T+ K++ L+ LDLS+N G +P L L
Sbjct: 323 LALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG 382
Query: 517 ------------SLNTLLLQGNALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLE 564
+L L LQ N +IP IPS+ SL
Sbjct: 383 PILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS 442
Query: 565 YILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGF 624
+ + LN+L G +PQ++ +K L L L N L+ IPS + +L +++L+ N
Sbjct: 443 KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRL 502
Query: 625 QGSIPEAIGSLISL 638
G IP+ IG L +L
Sbjct: 503 TGEIPKWIGRLENL 516
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 95/205 (46%), Gaps = 33/205 (16%)
Query: 992 LKRLSISVNKITGTIPRTVGNLT-ELRELHLHGNNL-----------------EAYLYNN 1033
LK L +S N+ +G +P ++ NL+ L L L NN E YL NN
Sbjct: 345 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNN 404
Query: 1034 KFTGRIPQNLGNCTLLNFLILRQNQLTG--------------VRLASNKLIGRIPSMIFN 1079
FTG+IP L NC+ L L L N L+G ++L N L G IP +
Sbjct: 405 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY 464
Query: 1080 NSNIEAIQLYGNHFSGHLPSSIGPYLPNLQGLILWGNNLSGIIPSSICNASQVILLGLSE 1139
+E + L N +G +PS + NL + L N L+G IP I + +L LS
Sbjct: 465 VKTLETLILDFNDLTGEIPSGLS-NCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSN 523
Query: 1140 NLFSGLIPNTFGNCRQLQILDLSLN 1164
N FSG IP G+CR L LDL+ N
Sbjct: 524 NSFSGNIPAELGDCRSLIWLDLNTN 548
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 123/300 (41%), Gaps = 81/300 (27%)
Query: 992 LKRLSISVNKITGTIPRTVGNLTELRELHLHGNNLEA-------------YLYNNKFTGR 1038
L+ L IS NK++G R + TEL+ L++ N L NKFTG
Sbjct: 225 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGE 284
Query: 1039 IPQNLGNCTLLNFLILRQNQLTGVRLASNKLIGRIPSMIFNNSNIEAIQLYGNHFSGHLP 1098
IP +FL + LTG+ L+ N G +P + S +E++ L N+FSG LP
Sbjct: 285 IP---------DFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP 335
Query: 1099 SSI-------------------------------------------GPYLPN-------- 1107
GP LPN
Sbjct: 336 MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNT 395
Query: 1108 LQGLILWGNNLSGIIPSSICNASQVILLGLSENLFSGLIPNTFGNCRQLQILDLSLNHLT 1167
LQ L L N +G IP ++ N S+++ L LS N SG IP++ G+ +L+ L L LN L
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNML- 454
Query: 1168 TGSSTQGHSFYTSLTNCRYLRRLVLQNNPLKGALPNSIGNLSTSLEYFFASSTELRGAIP 1227
G Q L + L L+L N L G +P+ + N T+L + S+ L G IP
Sbjct: 455 EGEIPQ------ELMYVKTLETLILDFNDLTGEIPSGLSN-CTNLNWISLSNNRLTGEIP 507
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 83/157 (52%), Gaps = 20/157 (12%)
Query: 991 KLKRLSISVNKITGTIPRTVGNLTELRELHLHGNNLEAYLYNNKFTGRIPQNLGNCTLLN 1050
+L L +S N ++GTIP ++G+L++LR+L L N LE G IPQ L L
Sbjct: 419 ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE---------GEIPQELMYVKTLE 469
Query: 1051 FLILRQNQLTGVRLASNKLIGRIPSMIFNNSNIEAIQLYGNHFSGHLPSSIGPYLPNLQG 1110
LIL N LT G IPS + N +N+ I L N +G +P IG L NL
Sbjct: 470 TLILDFNDLT----------GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG-RLENLAI 518
Query: 1111 LILWGNNLSGIIPSSICNASQVILLGLSENLFSGLIP 1147
L L N+ SG IP+ + + +I L L+ NLF+G IP
Sbjct: 519 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 104/248 (41%), Gaps = 55/248 (22%)
Query: 992 LKRLSISVNKITGTIPRTVGNLTELRELHLHGNNLEAYLYNNKFTGRIPQNLGNCTLLNF 1051
L +S+S N++TG IP+ +G L L L L NN F+G IP LG+C L +
Sbjct: 492 LNWISLSNNRLTGEIPKWIGRLENLAILKLS---------NNSFSGNIPAELGDCRSLIW 542
Query: 1052 LILRQNQLTGV----------RLASNKLIGRIPSMIFNNS---------------NIEAI 1086
L L N G ++A+N + G+ I N+ I +
Sbjct: 543 LDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSE 602
Query: 1087 QLYGNHFSGHLPSSI---------GPYLPN---LQGLILWGNNLSGIIPSSICNASQVIL 1134
QL N S P +I P N + L + N LSG IP I + + +
Sbjct: 603 QL--NRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFI 660
Query: 1135 LGLSENLFSGLIPNTFGNCRQLQILDLSLNHLTTGSSTQGHSFYTSLTNCRYLRRLVLQN 1194
L L N SG IP+ G+ R L ILDLS N L G Q S T LT + L N
Sbjct: 661 LNLGHNDISGSIPDEVGDLRGLNILDLSSNKL-DGRIPQAMSALTMLT------EIDLSN 713
Query: 1195 NPLKGALP 1202
N L G +P
Sbjct: 714 NNLSGPIP 721
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 115/254 (45%), Gaps = 38/254 (14%)
Query: 991 KLKRLSISVNKITGTIPRTVGNLTELRELHLHGNNLEAYLYNNKFTGRIPQNLGNCTLLN 1050
+LK L+IS NKI+G + V L L + NN F+ IP LG+C+ L
Sbjct: 179 ELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNN---------FSTGIPF-LGDCSALQ 226
Query: 1051 FLILRQNQLTG--------------VRLASNKLIGRIPSMIFNNSNIEAIQLYGNHFSGH 1096
L + N+L+G + ++SN+ +G IP + +++ + L N F+G
Sbjct: 227 HLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPL--KSLQYLSLAENKFTGE 284
Query: 1097 LPSSIGPYLPNLQGLILWGNNLSGIIPSSICNASQVILLGLSENLFSGLIP-NTFGNCRQ 1155
+P + L GL L GN+ G +P + S + L LS N FSG +P +T R
Sbjct: 285 IPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRG 344
Query: 1156 LQILDLSLNHLTTGSSTQGHSFYTSLTN-CRYLRRLVLQNNPLKGA-LPNSIGNLSTSLE 1213
L++LDLS N + SLTN L L L +N G LPN N +L+
Sbjct: 345 LKVLDLSFNEFS-------GELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 397
Query: 1214 YFFASSTELRGAIP 1227
+ + G IP
Sbjct: 398 ELYLQNNGFTGKIP 411
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 102 GGTIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSL 161
GG P N ++ L++S N G +P E+ MP L I++L N ISG++ D++ + L
Sbjct: 621 GGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGD-L 679
Query: 162 TELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQ 204
L D+SSN++ G++P ++ + L + +S N L+G IP+
Sbjct: 680 RGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722
Score = 34.3 bits (77), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 78/207 (37%), Gaps = 56/207 (27%)
Query: 1043 LGNCTLLNFLILRQNQLTGVRLASNKLIGRIPSMIFNNSNIEAIQLYGNHFSGHLPSSIG 1102
LG+C+ L FL + N L G++ + NS +E + L N SG
Sbjct: 122 LGSCSGLKFLNVSSNTL--------DFPGKVSGGLKLNS-LEVLDLSANSISGA------ 166
Query: 1103 PYLPNLQGLILWGNNLSGIIPSSICNASQVILLGLSENLFSGLIPNTFGNCRQLQILDLS 1162
N+ G + S C ++ L +S N SG + C L+ LD+S
Sbjct: 167 --------------NVVGWVLSDGC--GELKHLAISGNKISGDV--DVSRCVNLEFLDVS 208
Query: 1163 LNHLTTGSSTQGHSFYTSLTNCRYLRRLVLQNNPLKGALPNSIGNLSTSLEYFFASSTEL 1222
N+ +TG L +C L+ L + N L G +I T L+ SS +
Sbjct: 209 SNNFSTG--------IPFLGDCSALQHLDISGNKLSGDFSRAIST-CTELKLLNISSNQF 259
Query: 1223 RGAIPV--------------EFEGEIP 1235
G IP +F GEIP
Sbjct: 260 VGPIPPLPLKSLQYLSLAENKFTGEIP 286
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 149 bits (376), Expect = 1e-35, Method: Composition-based stats.
Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 19/309 (6%)
Query: 1313 ENNLLNTAALRRISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQED 1372
E+ ++ L+R S +EL++A++ FS N+LG G F VYK ADGT A+K L+E+
Sbjct: 16 EDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVK--RLKEE 73
Query: 1373 RALK---SFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSH---N 1426
R F E E++ HRNL ++ C P + L+ YM GS+ L
Sbjct: 74 RXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 133
Query: 1427 YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLD 1486
L+ +R I + A L YLH IIH D+K +N+LLD++ A +GDFG+AKL+D
Sbjct: 134 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 193
Query: 1487 GVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTG---E 1543
D TIG++APEY S G S DV+ +G++++E +T ++ D +
Sbjct: 194 YKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 253
Query: 1544 VCLKHWVEESLPD-AVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMN 1602
V L WV+ L + + ++D +L ++ ++ ++ +AL C++ P ER
Sbjct: 254 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEV-------EQLIQVALLCTQSSPMERPK 306
Query: 1603 VKDALANLK 1611
+ + + L+
Sbjct: 307 MSEVVRMLE 315
Score = 132 bits (332), Expect = 2e-30, Method: Composition-based stats.
Identities = 78/234 (33%), Positives = 121/234 (51%), Gaps = 4/234 (1%)
Query: 717 NLPILENDSLSLATWRRISYQELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVF 776
++P E+ + L +R S +ELQ +D FS N++G G FG VYK L G VA+K
Sbjct: 11 DVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRL 70
Query: 777 NLQ-LDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK 835
+ G F E E++ HRNL+++ C + L+ YM GS+ L
Sbjct: 71 KEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP 130
Query: 836 YT---LNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK 892
+ L+ +R I + A L YLH +IH D+K +N+LLD++ A + DFG++K
Sbjct: 131 ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 190
Query: 893 LLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTD 946
L+D +D T G++APEY S G S DV+ +G++++E T + D
Sbjct: 191 LMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 244
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant
Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 143 bits (360), Expect = 8e-34, Method: Composition-based stats.
Identities = 95/309 (30%), Positives = 157/309 (50%), Gaps = 19/309 (6%)
Query: 1313 ENNLLNTAALRRISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQED 1372
E+ ++ L+R S +EL++A++ F N+LG G F VYK ADG A+K L+E+
Sbjct: 8 EDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVK--RLKEE 65
Query: 1373 RALK---SFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSH---N 1426
R F E E++ HRNL ++ C P + L+ YM GS+ L
Sbjct: 66 RTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 125
Query: 1427 YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLD 1486
L+ +R I + A L YLH IIH D+K +N+LLD++ A +GDFG+AKL+D
Sbjct: 126 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185
Query: 1487 GVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTG---E 1543
D IG++APEY S G S DV+ +G++++E +T ++ D +
Sbjct: 186 YKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 245
Query: 1544 VCLKHWVEESLPD-AVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMN 1602
V L WV+ L + + ++D +L ++ ++ ++ +AL C++ P ER
Sbjct: 246 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEV-------EQLIQVALLCTQSSPMERPK 298
Query: 1603 VKDALANLK 1611
+ + + L+
Sbjct: 299 MSEVVRMLE 307
Score = 128 bits (321), Expect = 3e-29, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 119/234 (50%), Gaps = 4/234 (1%)
Query: 717 NLPILENDSLSLATWRRISYQELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVF 776
++P E+ + L +R S +ELQ +D F N++G G FG VYK L G VA+K
Sbjct: 3 DVPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRL 62
Query: 777 NLQ-LDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK 835
+ G F E E++ HRNL+++ C + L+ YM GS+ L
Sbjct: 63 KEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP 122
Query: 836 YT---LNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK 892
+ L+ +R I + A L YLH +IH D+K +N+LLD++ A + DFG++K
Sbjct: 123 ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 182
Query: 893 LLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTD 946
L+D +D G++APEY S G S DV+ +G++++E T + D
Sbjct: 183 LMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 147/294 (50%), Gaps = 16/294 (5%)
Query: 1324 RISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECE 1383
R+ +L ATN F L+G G+F VYK DG A+K + + + ++ F+ E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHN---YLLNIEQRLDIMID 1440
+ RH +L ++ C LI +YM G+L++ LY + ++ EQRL+I I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 1441 VACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK-QTMTLAT 1499
A L YLH + +IIH D+K N+LLD++ V + DFGI+K +D + T
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 1500 IGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGE-VCLKHWVEESLPDA- 1557
+GY+ PEY +G ++ DVYSFG+++ E L R E V L W ES +
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 1558 VTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLK 1611
+ ++D NL AD + + + A+KC E+R ++ D L L+
Sbjct: 265 LEQIVDPNL------AD-KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 122/235 (51%), Gaps = 8/235 (3%)
Query: 733 RISYQELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECE 792
R+ +L+ T+ F LIG G FG VYK L G VA+K + I+ F+ E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK---YTLNIQQRLDIMID 849
L RH +LV +I C LI +YM G+L++ LY +++ +QRL+I I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 850 VASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKL-LDGEDSVTQTMTLAT 908
A L YL H +IH D+K N+LLD++ V ++DFGISK + + + + T
Sbjct: 148 AARGLHYL---HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGE-TSLKKWVEES 962
GY+ PEY +G ++ DVYSFG+++ E + + E +L +W ES
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 126 bits (317), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 150/297 (50%), Gaps = 22/297 (7%)
Query: 1324 RISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECE 1383
R+ +L ATN F L+G G+F VYK DG A+K + + + ++ F+ E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHN---YLLNIEQRLDIMID 1440
+ RH +L ++ C LI +YM G+L++ LY + ++ EQRL+I I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 1441 VACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQT----MT 1496
A L YLH + +IIH D+K N+LLD++ V + DFGI+K G + + QT +
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK--KGTE-LGQTHLXXVV 201
Query: 1497 LATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGE-VCLKHWVEESLP 1555
T+GY+ PEY +G ++ DVYSFG+++ E L R E V L W ES
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN 261
Query: 1556 DA-VTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLK 1611
+ + ++D NL AD + + + A+KC E+R ++ D L L+
Sbjct: 262 NGQLEQIVDPNL------AD-KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 124/238 (52%), Gaps = 14/238 (5%)
Query: 733 RISYQELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECE 792
R+ +L+ T+ F LIG G FG VYK L G VA+K + I+ F+ E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK---YTLNIQQRLDIMID 849
L RH +LV +I C LI +YM G+L++ LY +++ +QRL+I I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 850 VASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT----MT 905
A L YL H +IH D+K N+LLD++ V ++DFGISK G + + QT +
Sbjct: 148 AARGLHYL---HTRAIIHRDVKSINILLDENFVPKITDFGISK--KGTE-LGQTHLXXVV 201
Query: 906 LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGE-TSLKKWVEES 962
T GY+ PEY +G ++ DVYSFG+++ E + + E +L +W ES
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 111/197 (56%), Gaps = 7/197 (3%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGA--IKSFDAECEVLRRVRHRNLVKIISSC 809
IGAGSFG+V++A +G +VA+K+ Q A + F E +++R+RH N+V + +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 810 SNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
+ +++ EY+ +GSL + L+ + L+ ++RL + DVA + YLH+ +P P++H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVH 162
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
DLK N+L+D + DFG+S+ L + T +MAPE + + D
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSD 221
Query: 928 VYSFGILMIETFTRKMP 944
VYSFG+++ E T + P
Sbjct: 222 VYSFGVILWELATLQQP 238
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 109/207 (52%), Gaps = 7/207 (3%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRA--LKSFDAECEVMRRIRHRNLAKIVSSC 1400
+G G F +V++A + G++ A+KI Q+ A + F E +M+R+RH N+ + +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSH--NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIH 1458
+ P +++ +Y+ +GSL + L+ L+ +RL + DVA + YLH + I+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 1459 CDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGD 1518
DLK N+L+D + DFG+++ L + T +MAPE + + D
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSD 221
Query: 1519 VYSFGILMMETLTRRKPTDDMFTGEVC 1545
VYSFG+++ E T ++P ++ +V
Sbjct: 222 VYSFGVILWELATLQQPWGNLNPAQVV 248
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 107 bits (267), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 112/197 (56%), Gaps = 7/197 (3%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGA--IKSFDAECEVLRRVRHRNLVKIISSC 809
IGAGSFG+V++A +G +VA+K+ Q A + F E +++R+RH N+V + +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 810 SNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
+ +++ EY+ +GSL + L+ + L+ ++RL + DVA + YLH+ +P P++H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVH 162
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
+LK N+L+D + DFG+S+ L ++ T +MAPE + + D
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSR-LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSD 221
Query: 928 VYSFGILMIETFTRKMP 944
VYSFG+++ E T + P
Sbjct: 222 VYSFGVILWELATLQQP 238
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 109/207 (52%), Gaps = 7/207 (3%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRA--LKSFDAECEVMRRIRHRNLAKIVSSC 1400
+G G F +V++A + G++ A+KI Q+ A + F E +M+R+RH N+ + +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSH--NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIH 1458
+ P +++ +Y+ +GSL + L+ L+ +RL + DVA + YLH + I+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 1459 CDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGD 1518
+LK N+L+D + DFG+++ L + T +MAPE + + D
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSR-LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSD 221
Query: 1519 VYSFGILMMETLTRRKPTDDMFTGEVC 1545
VYSFG+++ E T ++P ++ +V
Sbjct: 222 VYSFGVILWELATLQQPWGNLNPAQVV 248
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 121/241 (50%), Gaps = 20/241 (8%)
Query: 722 ENDSLSLATWR--RISYQELQRLTDGFSE------SNLIGAGSFGSVYKATLPYGMNVAI 773
EN SL ++ R S+ EL+ +T+ F E N +G G FG VYK + VA+
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAV 59
Query: 774 KVFNLQLDGAI----KSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEK 829
K +D + FD E +V+ + +H NLV+++ S+ L+ YMP GSL
Sbjct: 60 KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 830 WLYSHKYT--LNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSD 887
L T L+ R I A+ + +LH H IH D+K +N+LLD+ A +SD
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISD 176
Query: 888 FGISKLLDG-EDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTD 946
FG+++ + +V + + T YMAPE G ++ D+YSFG++++E T D
Sbjct: 177 FGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
Query: 947 E 947
E
Sbjct: 236 E 236
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 116/234 (49%), Gaps = 20/234 (8%)
Query: 1313 ENNLLNTAALR--RISYQELRLATNGFSE------SNLLGTGIFSSVYKATFADGTNAAI 1364
EN L + R S+ EL+ TN F E N +G G F VYK + + T A+
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAV 59
Query: 1365 K----IFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEK 1420
K + + + + FD E +VM + +H NL +++ S+ L+ YMP GSL
Sbjct: 60 KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 1421 WLYSHNYL--LNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGD 1478
L + L+ R I A + +LH+ + IH D+K +N+LLD+ A + D
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISD 176
Query: 1479 FGIAKLLDG-VDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
FG+A+ + ++ + + T YMAPE G ++ D+YSFG++++E +T
Sbjct: 177 FGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 103 bits (258), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 120/241 (49%), Gaps = 20/241 (8%)
Query: 722 ENDSLSLATWR--RISYQELQRLTDGFSE------SNLIGAGSFGSVYKATLPYGMNVAI 773
EN SL ++ R S+ EL+ +T+ F E N +G G FG VYK + VA+
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAV 59
Query: 774 KVFNLQLDGAI----KSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEK 829
K +D + FD E +V+ + +H NLV+++ S+ L+ YMP GSL
Sbjct: 60 KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 830 WLYSHKYT--LNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSD 887
L T L+ R I A+ + +LH H IH D+K +N+LLD+ A +SD
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISD 176
Query: 888 FGISKLLDG-EDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTD 946
FG+++ + +V + T YMAPE G ++ D+YSFG++++E T D
Sbjct: 177 FGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
Query: 947 E 947
E
Sbjct: 236 E 236
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 116/237 (48%), Gaps = 26/237 (10%)
Query: 1313 ENNLLNTAALR--RISYQELRLATNGFSE------SNLLGTGIFSSVYKATFADGTNAAI 1364
EN L + R S+ EL+ TN F E N +G G F VYK + + T A+
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAV 59
Query: 1365 K----IFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEK 1420
K + + + + FD E +VM + +H NL +++ S+ L+ YMP GSL
Sbjct: 60 KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 1421 WLYSHNYL--LNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGD 1478
L + L+ R I A + +LH+ + IH D+K +N+LLD+ A + D
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISD 176
Query: 1479 FGIAKLLDGVDSMKQTMT----LATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
FG+A+ + QT+ + T YMAPE G ++ D+YSFG++++E +T
Sbjct: 177 FGLAR---ASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 115/235 (48%), Gaps = 18/235 (7%)
Query: 726 LSLATWRRISYQELQRLTDGFSE------SNLIGAGSFGSVYKATLPYGMNVAIKVFNLQ 779
+S + S+ EL+ +T+ F E N +G G FG VYK + VA+K
Sbjct: 1 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAM 59
Query: 780 LDGAI----KSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK 835
+D + FD E +V+ + +H NLV+++ S+ L+ YMP GSL L
Sbjct: 60 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 119
Query: 836 YT--LNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKL 893
T L+ R I A+ + +LH H IH D+K +N+LLD+ A +SDFG+++
Sbjct: 120 GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 176
Query: 894 LDG-EDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE 947
+ V + T YMAPE G ++ D+YSFG++++E T DE
Sbjct: 177 SEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 230
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 111/230 (48%), Gaps = 18/230 (7%)
Query: 1322 LRRISYQELRLATNGFSE------SNLLGTGIFSSVYKATFADGTNAAIK----IFSLQE 1371
S+ EL+ TN F E N +G G F VYK + + T A+K + +
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITT 64
Query: 1372 DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL--L 1429
+ + FD E +VM + +H NL +++ S+ L+ YMP GSL L + L
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 124
Query: 1430 NIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG-V 1488
+ R I A + +LH+ + IH D+K +N+LLD+ A + DFG+A+ +
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 1489 DSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDD 1538
+ + T YMAPE G ++ D+YSFG++++E +T D+
Sbjct: 182 QXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 17/209 (8%)
Query: 746 FSESNL-----IGAGSFGSVYKATLP-----YGMNVAIKVFNLQLDGAIKSFDAECEVLR 795
F E +L +G G+FGSV G VA+K + ++ F+ E E+L+
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 796 RVRHRNLVKIISSCSNHGFK--ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
++H N+VK C + G + LI+EY+P GSL +L HK ++ + L +
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGY 911
+EYL IH DL N+L++++ + DFG++K+L D E + + +
Sbjct: 145 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFT 940
APE +E S DV+SFG+++ E FT
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELFT 230
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 1337 FSESNL-----LGTGIFSSVYKATF---ADGTNAAIKIFSLQE--DRALKSFDAECEVMR 1386
F E +L LG G F SV + D T + + LQ + L+ F+ E E+++
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 1387 RIRHRNLAKIVSSCSNPGFK--ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACA 1444
++H N+ K C + G + LI++Y+P GSL +L H ++ + L +
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGY 1502
+EYL + IH DL N+L++++ +GDFG+ K+L D + + I +
Sbjct: 145 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE +E S + DV+SFG+++ E T
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 17/209 (8%)
Query: 746 FSESNL-----IGAGSFGSVYKATLP-----YGMNVAIKVFNLQLDGAIKSFDAECEVLR 795
F E +L +G G+FGSV G VA+K + ++ F+ E E+L+
Sbjct: 6 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 65
Query: 796 RVRHRNLVKIISSCSNHGFK--ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
++H N+VK C + G + LI+EY+P GSL +L HK ++ + L +
Sbjct: 66 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 125
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGY 911
+EYL IH DL N+L++++ + DFG++K+L D E + + +
Sbjct: 126 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 182
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFT 940
APE +E S DV+SFG+++ E FT
Sbjct: 183 YAPESLTESKFSVASDVWSFGVVLYELFT 211
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 1337 FSESNL-----LGTGIFSSVYKATF---ADGTNAAIKIFSLQE--DRALKSFDAECEVMR 1386
F E +L LG G F SV + D T + + LQ + L+ F+ E E+++
Sbjct: 6 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 65
Query: 1387 RIRHRNLAKIVSSCSNPGFK--ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACA 1444
++H N+ K C + G + LI++Y+P GSL +L H ++ + L +
Sbjct: 66 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 125
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGY 1502
+EYL + IH DL N+L++++ +GDFG+ K+L D + + I +
Sbjct: 126 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 182
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE +E S + DV+SFG+++ E T
Sbjct: 183 YAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 17/209 (8%)
Query: 746 FSESNL-----IGAGSFGSVYKATLP-----YGMNVAIKVFNLQLDGAIKSFDAECEVLR 795
F E +L +G G+FGSV G VA+K + ++ F+ E E+L+
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 796 RVRHRNLVKIISSCSNHGFK--ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
++H N+VK C + G + LI+EY+P GSL +L HK ++ + L +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGY 911
+EYL IH DL N+L++++ + DFG++K+L D E + + +
Sbjct: 127 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFT 940
APE +E S DV+SFG+++ E FT
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT 212
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 1337 FSESNL-----LGTGIFSSVYKATF---ADGTNAAIKIFSLQE--DRALKSFDAECEVMR 1386
F E +L LG G F SV + D T + + LQ + L+ F+ E E+++
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 1387 RIRHRNLAKIVSSCSNPGFK--ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACA 1444
++H N+ K C + G + LI++Y+P GSL +L H ++ + L +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGY 1502
+EYL + IH DL N+L++++ +GDFG+ K+L D + + I +
Sbjct: 127 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE +E S + DV+SFG+++ E T
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 17/209 (8%)
Query: 746 FSESNL-----IGAGSFGSVYKATLP-----YGMNVAIKVFNLQLDGAIKSFDAECEVLR 795
F E +L +G G+FGSV G VA+K + ++ F+ E E+L+
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 796 RVRHRNLVKIISSCSNHGFK--ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
++H N+VK C + G + LI+EY+P GSL +L HK ++ + L +
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGY 911
+EYL IH DL N+L++++ + DFG++K+L D E + + +
Sbjct: 145 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFT 940
APE +E S DV+SFG+++ E FT
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELFT 230
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 1337 FSESNL-----LGTGIFSSVYKATF---ADGTNAAIKIFSLQE--DRALKSFDAECEVMR 1386
F E +L LG G F SV + D T + + LQ + L+ F+ E E+++
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 1387 RIRHRNLAKIVSSCSNPGFK--ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACA 1444
++H N+ K C + G + LI++Y+P GSL +L H ++ + L +
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGY 1502
+EYL + IH DL N+L++++ +GDFG+ K+L D + + I +
Sbjct: 145 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE +E S + DV+SFG+++ E T
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 17/209 (8%)
Query: 746 FSESNL-----IGAGSFGSVYKATLP-----YGMNVAIKVFNLQLDGAIKSFDAECEVLR 795
F E +L +G G+FGSV G VA+K + ++ F+ E E+L+
Sbjct: 11 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 70
Query: 796 RVRHRNLVKIISSCSNHGFK--ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
++H N+VK C + G + LI+EY+P GSL +L HK ++ + L +
Sbjct: 71 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 130
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGY 911
+EYL IH DL N+L++++ + DFG++K+L D E + + +
Sbjct: 131 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 187
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFT 940
APE +E S DV+SFG+++ E FT
Sbjct: 188 YAPESLTESKFSVASDVWSFGVVLYELFT 216
Score = 90.9 bits (224), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 1337 FSESNL-----LGTGIFSSVYKATF---ADGTNAAIKIFSLQE--DRALKSFDAECEVMR 1386
F E +L LG G F SV + D T + + LQ + L+ F+ E E+++
Sbjct: 11 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 70
Query: 1387 RIRHRNLAKIVSSCSNPGFK--ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACA 1444
++H N+ K C + G + LI++Y+P GSL +L H ++ + L +
Sbjct: 71 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 130
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGY 1502
+EYL + IH DL N+L++++ +GDFG+ K+L D + + I +
Sbjct: 131 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 187
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE +E S + DV+SFG+++ E T
Sbjct: 188 YAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 17/209 (8%)
Query: 746 FSESNL-----IGAGSFGSVYKATLP-----YGMNVAIKVFNLQLDGAIKSFDAECEVLR 795
F E +L +G G+FGSV G VA+K + ++ F+ E E+L+
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 796 RVRHRNLVKIISSCSNHGFK--ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
++H N+VK C + G + LI+EY+P GSL +L HK ++ + L +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGY 911
+EYL IH DL N+L++++ + DFG++K+L D E + + +
Sbjct: 127 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFT 940
APE +E S DV+SFG+++ E FT
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT 212
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 1337 FSESNL-----LGTGIFSSVYKATF---ADGTNAAIKIFSLQE--DRALKSFDAECEVMR 1386
F E +L LG G F SV + D T + + LQ + L+ F+ E E+++
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 1387 RIRHRNLAKIVSSCSNPGFK--ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACA 1444
++H N+ K C + G + LI++Y+P GSL +L H ++ + L +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGY 1502
+EYL + IH DL N+L++++ +GDFG+ K+L D + + I +
Sbjct: 127 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE +E S + DV+SFG+++ E T
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 17/209 (8%)
Query: 746 FSESNL-----IGAGSFGSVYKATLP-----YGMNVAIKVFNLQLDGAIKSFDAECEVLR 795
F E +L +G G+FGSV G VA+K + ++ F+ E E+L+
Sbjct: 5 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 64
Query: 796 RVRHRNLVKIISSCSNHGFK--ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
++H N+VK C + G + LI+EY+P GSL +L HK ++ + L +
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 124
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGY 911
+EYL IH DL N+L++++ + DFG++K+L D E + + +
Sbjct: 125 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 181
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFT 940
APE +E S DV+SFG+++ E FT
Sbjct: 182 YAPESLTESKFSVASDVWSFGVVLYELFT 210
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 1337 FSESNL-----LGTGIFSSVYKATF---ADGTNAAIKIFSLQE--DRALKSFDAECEVMR 1386
F E +L LG G F SV + D T + + LQ + L+ F+ E E+++
Sbjct: 5 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 64
Query: 1387 RIRHRNLAKIVSSCSNPGFK--ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACA 1444
++H N+ K C + G + LI++Y+P GSL +L H ++ + L +
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 124
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGY 1502
+EYL + IH DL N+L++++ +GDFG+ K+L D + + I +
Sbjct: 125 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 181
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE +E S + DV+SFG+++ E T
Sbjct: 182 YAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 17/209 (8%)
Query: 746 FSESNL-----IGAGSFGSVYKATLP-----YGMNVAIKVFNLQLDGAIKSFDAECEVLR 795
F E +L +G G+FGSV G VA+K + ++ F+ E E+L+
Sbjct: 38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 97
Query: 796 RVRHRNLVKIISSCSNHGFK--ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
++H N+VK C + G + LI+EY+P GSL +L HK ++ + L +
Sbjct: 98 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 157
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGY 911
+EYL IH DL N+L++++ + DFG++K+L D E + + +
Sbjct: 158 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 214
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFT 940
APE +E S DV+SFG+++ E FT
Sbjct: 215 YAPESLTESKFSVASDVWSFGVVLYELFT 243
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 20/235 (8%)
Query: 1311 PTENNLLNTAALRRISYQELRLATNGFSESNL-----LGTGIFSSVYKATF---ADGTNA 1362
PT NL A+ S E R T F E +L LG G F SV + D T
Sbjct: 15 PTTENLYFQGAMG--SAFEDRDPTQ-FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE 71
Query: 1363 AIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFK--ALILQYMPQGSL 1418
+ + LQ + L+ F+ E E+++ ++H N+ K C + G + LI++Y+P GSL
Sbjct: 72 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 131
Query: 1419 EKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGD 1478
+L H ++ + L + +EYL + IH DL N+L++++ +GD
Sbjct: 132 RDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGD 188
Query: 1479 FGIAKLL--DGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
FG+ K+L D + + I + APE +E S + DV+SFG+++ E T
Sbjct: 189 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 17/209 (8%)
Query: 746 FSESNL-----IGAGSFGSVYKATLP-----YGMNVAIKVFNLQLDGAIKSFDAECEVLR 795
F E +L +G G+FGSV G VA+K + ++ F+ E E+L+
Sbjct: 14 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 73
Query: 796 RVRHRNLVKIISSCSNHGFK--ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
++H N+VK C + G + LI+EY+P GSL +L HK ++ + L +
Sbjct: 74 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 133
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGY 911
+EYL IH DL N+L++++ + DFG++K+L D E + + +
Sbjct: 134 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 190
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFT 940
APE +E S DV+SFG+++ E FT
Sbjct: 191 YAPESLTESKFSVASDVWSFGVVLYELFT 219
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 1337 FSESNL-----LGTGIFSSVYKATF---ADGTNAAIKIFSLQE--DRALKSFDAECEVMR 1386
F E +L LG G F SV + D T + + LQ + L+ F+ E E+++
Sbjct: 14 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 73
Query: 1387 RIRHRNLAKIVSSCSNPGFK--ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACA 1444
++H N+ K C + G + LI++Y+P GSL +L H ++ + L +
Sbjct: 74 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 133
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGY 1502
+EYL + IH DL N+L++++ +GDFG+ K+L D + + I +
Sbjct: 134 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 190
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE +E S + DV+SFG+++ E T
Sbjct: 191 YAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 17/209 (8%)
Query: 746 FSESNL-----IGAGSFGSVYKATLP-----YGMNVAIKVFNLQLDGAIKSFDAECEVLR 795
F E +L +G G+FGSV G VA+K + ++ F+ E E+L+
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 796 RVRHRNLVKIISSCSNHGFK--ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
++H N+VK C + G + LI+EY+P GSL +L HK ++ + L +
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 129
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGY 911
+EYL IH DL N+L++++ + DFG++K+L D E + + +
Sbjct: 130 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFT 940
APE +E S DV+SFG+++ E FT
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 1337 FSESNL-----LGTGIFSSVYKATF---ADGTNAAIKIFSLQE--DRALKSFDAECEVMR 1386
F E +L LG G F SV + D T + + LQ + L+ F+ E E+++
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 1387 RIRHRNLAKIVSSCSNPGFK--ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACA 1444
++H N+ K C + G + LI++Y+P GSL +L H ++ + L +
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 129
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGY 1502
+EYL + IH DL N+L++++ +GDFG+ K+L D + + I +
Sbjct: 130 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE +E S + DV+SFG+++ E T
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 17/209 (8%)
Query: 746 FSESNL-----IGAGSFGSVYKATLP-----YGMNVAIKVFNLQLDGAIKSFDAECEVLR 795
F E +L +G G+FGSV G VA+K + ++ F+ E E+L+
Sbjct: 12 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 71
Query: 796 RVRHRNLVKIISSCSNHGFK--ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
++H N+VK C + G + LI+EY+P GSL +L HK ++ + L +
Sbjct: 72 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 131
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGY 911
+EYL IH DL N+L++++ + DFG++K+L D E + + +
Sbjct: 132 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 188
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFT 940
APE +E S DV+SFG+++ E FT
Sbjct: 189 YAPESLTESKFSVASDVWSFGVVLYELFT 217
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 1337 FSESNL-----LGTGIFSSVYKATF---ADGTNAAIKIFSLQE--DRALKSFDAECEVMR 1386
F E +L LG G F SV + D T + + LQ + L+ F+ E E+++
Sbjct: 12 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 71
Query: 1387 RIRHRNLAKIVSSCSNPGFK--ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACA 1444
++H N+ K C + G + LI++Y+P GSL +L H ++ + L +
Sbjct: 72 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 131
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGY 1502
+EYL + IH DL N+L++++ +GDFG+ K+L D + + I +
Sbjct: 132 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 188
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE +E S + DV+SFG+++ E T
Sbjct: 189 YAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 96.7 bits (239), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 17/209 (8%)
Query: 746 FSESNL-----IGAGSFGSVYKATLP-----YGMNVAIKVFNLQLDGAIKSFDAECEVLR 795
F E +L +G G+FGSV G VA+K + ++ F+ E E+L+
Sbjct: 13 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 72
Query: 796 RVRHRNLVKIISSCSNHGFK--ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
++H N+VK C + G + LI+EY+P GSL +L HK ++ + L +
Sbjct: 73 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 132
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGY 911
+EYL IH DL N+L++++ + DFG++K+L D E + + +
Sbjct: 133 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 189
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFT 940
APE +E S DV+SFG+++ E FT
Sbjct: 190 YAPESLTESKFSVASDVWSFGVVLYELFT 218
Score = 90.5 bits (223), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 1337 FSESNL-----LGTGIFSSVYKATF---ADGTNAAIKIFSLQE--DRALKSFDAECEVMR 1386
F E +L LG G F SV + D T + + LQ + L+ F+ E E+++
Sbjct: 13 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 72
Query: 1387 RIRHRNLAKIVSSCSNPGFK--ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACA 1444
++H N+ K C + G + LI++Y+P GSL +L H ++ + L +
Sbjct: 73 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 132
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGY 1502
+EYL + IH DL N+L++++ +GDFG+ K+L D + + I +
Sbjct: 133 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 189
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE +E S + DV+SFG+++ E T
Sbjct: 190 YAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 105/209 (50%), Gaps = 17/209 (8%)
Query: 746 FSESNL-----IGAGSFGSVYKATLP-----YGMNVAIKVFNLQLDGAIKSFDAECEVLR 795
F E +L +G G+FGSV G VA+K + ++ F+ E E+L+
Sbjct: 10 FEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 796 RVRHRNLVKIISSCSNHGFK--ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
++H N+VK C + G + LI+E++P GSL ++L HK ++ + L +
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKG 129
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGY 911
+EYL IH DL N+L++++ + DFG++K+L D E + + +
Sbjct: 130 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFT 940
APE +E S DV+SFG+++ E FT
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 17/209 (8%)
Query: 1337 FSESNL-----LGTGIFSSVYKATF---ADGTNAAIKIFSLQE--DRALKSFDAECEVMR 1386
F E +L LG G F SV + D T + + LQ + L+ F+ E E+++
Sbjct: 10 FEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 1387 RIRHRNLAKIVSSCSNPGFK--ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACA 1444
++H N+ K C + G + LI++++P GSL ++L H ++ + L +
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKG 129
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGY 1502
+EYL + IH DL N+L++++ +GDFG+ K+L D + + I +
Sbjct: 130 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE +E S + DV+SFG+++ E T
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 99/191 (51%), Gaps = 12/191 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS-CS 810
IG G FG V G VA+K ++ D ++F AE V+ ++RH NLV+++
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 811 NHGFKALILEYMPQGSLEKWLYSH-KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
G ++ EYM +GSL +L S + L L +DV A+EYL + +H D
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 133
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L NVL+ +D VA +SDFG++K E S TQ + APE E ST DV+
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREAAFSTKSDVW 189
Query: 930 SFGILMIETFT 940
SFGIL+ E ++
Sbjct: 190 SFGILLWEIYS 200
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 12/188 (6%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSS-CS 1401
+G G F V + G A+K ++ D ++F AE VM ++RH NL +++
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 1402 NPGFKALILQYMPQGSLEKWLYSHNY-LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
G ++ +YM +GSL +L S +L + L +DV A+EYL + +H D
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 133
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVY 1520
L NVL+ +D VA + DFG+ K S + T L + + APE E ST DV+
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL-PVKWTAPEALREAAFSTKSDVW 189
Query: 1521 SFGILMME 1528
SFGIL+ E
Sbjct: 190 SFGILLWE 197
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 17/209 (8%)
Query: 746 FSESNL-----IGAGSFGSVYKATLP-----YGMNVAIKVFNLQLDGAIKSFDAECEVLR 795
F E +L +G G+FGSV G VA+K + ++ F+ E E+L+
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 796 RVRHRNLVKIISSCSNHGFK--ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
++H N+VK C + G + LI+EY+P GSL +L HK ++ + L +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGY 911
+EYL IH DL N+L++++ + DFG++K+L D E + + +
Sbjct: 127 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFW 183
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFT 940
APE +E S DV+SFG+++ E FT
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT 212
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 17/209 (8%)
Query: 1337 FSESNL-----LGTGIFSSVYKATF---ADGTNAAIKIFSLQE--DRALKSFDAECEVMR 1386
F E +L LG G F SV + D T + + LQ + L+ F+ E E+++
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 1387 RIRHRNLAKIVSSCSNPGFK--ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACA 1444
++H N+ K C + G + LI++Y+P GSL +L H ++ + L +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT--LATIGY 1502
+EYL + IH DL N+L++++ +GDFG+ K+L + + I +
Sbjct: 127 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFW 183
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE +E S + DV+SFG+++ E T
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 17/209 (8%)
Query: 746 FSESNL-----IGAGSFGSVYKATLP-----YGMNVAIKVFNLQLDGAIKSFDAECEVLR 795
F E +L +G G+FGSV G VA+K + ++ F+ E E+L+
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 796 RVRHRNLVKIISSCSNHGFK--ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
++H N+VK C + G + LI+EY+P GSL +L +H ++ + L +
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKG 129
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGY 911
+EYL IH DL N+L++++ + DFG++K+L D E + + +
Sbjct: 130 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFT 940
APE +E S DV+SFG+++ E FT
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
Score = 90.1 bits (222), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 17/209 (8%)
Query: 1337 FSESNL-----LGTGIFSSVYKATF---ADGTNAAIKIFSLQE--DRALKSFDAECEVMR 1386
F E +L LG G F SV + D T + + LQ + L+ F+ E E+++
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 1387 RIRHRNLAKIVSSCSNPGFK--ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACA 1444
++H N+ K C + G + LI++Y+P GSL +L +H ++ + L +
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKG 129
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGY 1502
+EYL + IH DL N+L++++ +GDFG+ K+L D + + I +
Sbjct: 130 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE +E S + DV+SFG+++ E T
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 94.7 bits (234), Expect = 4e-19, Method: Composition-based stats.
Identities = 69/191 (36%), Positives = 99/191 (51%), Gaps = 12/191 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS-CS 810
IG G FG V G VA+K ++ D ++F AE V+ ++RH NLV+++
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 811 NHGFKALILEYMPQGSLEKWLYSH-KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
G ++ EYM +GSL +L S + L L +DV A+EYL + +H D
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 127
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L NVL+ +D VA +SDFG++K E S TQ + APE E ST DV+
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 183
Query: 930 SFGILMIETFT 940
SFGIL+ E ++
Sbjct: 184 SFGILLWEIYS 194
Score = 83.6 bits (205), Expect = 1e-15, Method: Composition-based stats.
Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 12/188 (6%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSS-CS 1401
+G G F V + G A+K ++ D ++F AE VM ++RH NL +++
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 1402 NPGFKALILQYMPQGSLEKWLYSHNY-LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
G ++ +YM +GSL +L S +L + L +DV A+EYL + +H D
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 127
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVY 1520
L NVL+ +D VA + DFG+ K S + T L + + APE E ST DV+
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLP-VKWTAPEALREKKFSTKSDVW 183
Query: 1521 SFGILMME 1528
SFGIL+ E
Sbjct: 184 SFGILLWE 191
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 94.7 bits (234), Expect = 4e-19, Method: Composition-based stats.
Identities = 69/191 (36%), Positives = 99/191 (51%), Gaps = 12/191 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS-CS 810
IG G FG V G VA+K ++ D ++F AE V+ ++RH NLV+++
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 811 NHGFKALILEYMPQGSLEKWLYSH-KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
G ++ EYM +GSL +L S + L L +DV A+EYL + +H D
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 142
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L NVL+ +D VA +SDFG++K E S TQ + APE E ST DV+
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 198
Query: 930 SFGILMIETFT 940
SFGIL+ E ++
Sbjct: 199 SFGILLWEIYS 209
Score = 83.6 bits (205), Expect = 1e-15, Method: Composition-based stats.
Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 12/188 (6%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSS-CS 1401
+G G F V + G A+K ++ D ++F AE VM ++RH NL +++
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 1402 NPGFKALILQYMPQGSLEKWLYSHNY-LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
G ++ +YM +GSL +L S +L + L +DV A+EYL + +H D
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 142
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVY 1520
L NVL+ +D VA + DFG+ K S + T L + + APE E ST DV+
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLP-VKWTAPEALREKKFSTKSDVW 198
Query: 1521 SFGILMME 1528
SFGIL+ E
Sbjct: 199 SFGILLWE 206
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 130/294 (44%), Gaps = 37/294 (12%)
Query: 1309 SRPTENNLLNTAALRRISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS 1368
S+P L A I + LRL LG G F V+ T+ T AIK
Sbjct: 167 SKPQTQGLAKDAW--EIPRESLRLEVK-------LGQGCFGEVWMGTWNGTTRVAIKTLK 217
Query: 1369 LQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHN-Y 1427
+ ++F E +VM+++RH L ++ + S ++ +YM +GSL +L
Sbjct: 218 -PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGK 275
Query: 1428 LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487
L + Q +D+ +A + Y+ + + +H DL+ +N+L+ +++V + DFG+A+L++
Sbjct: 276 YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 332
Query: 1488 VDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTR-RKPTDDMFTGEVCL 1546
+ + I + APE G + DV+SFGIL+ E T+ R P M EV
Sbjct: 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL- 391
Query: 1547 KHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEER 1600
D V E + +C S+ L +C + PEER
Sbjct: 392 ---------DQV-----------ERGYRMPCPPECPESLHDLMCQCWRKEPEER 425
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V+ T VAIK G + ++F E +V++++RH LV++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 810 SNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
S ++ EYM +GSL +L KY L + Q +D+ +AS + Y+ + +H
Sbjct: 249 SEEPI-YIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMN---YVH 303
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
DL+ +N+L+ ++ V ++DFG+++L++ + + + APE G + D
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 928 VYSFGILMIETFTR 941
V+SFGIL+ E T+
Sbjct: 364 VWSFGILLTELTTK 377
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src, In
Complex With Amp-pnp
Length = 452
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 130/294 (44%), Gaps = 37/294 (12%)
Query: 1309 SRPTENNLLNTAALRRISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS 1368
S+P L A I + LRL LG G F V+ T+ T AIK
Sbjct: 167 SKPQTQGLAKDAW--EIPRESLRLEVK-------LGQGCFGEVWMGTWNGTTRVAIKTLK 217
Query: 1369 LQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHN-Y 1427
+ ++F E +VM+++RH L ++ + S ++ +YM +GSL +L
Sbjct: 218 -PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGK 275
Query: 1428 LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487
L + Q +D+ +A + Y+ + + +H DL+ +N+L+ +++V + DFG+A+L++
Sbjct: 276 YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 332
Query: 1488 VDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTR-RKPTDDMFTGEVCL 1546
+ + I + APE G + DV+SFGIL+ E T+ R P M EV
Sbjct: 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL- 391
Query: 1547 KHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEER 1600
D V E + +C S+ L +C + PEER
Sbjct: 392 ---------DQV-----------ERGYRMPCPPECPESLHDLMCQCWRKEPEER 425
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V+ T VAIK G + ++F E +V++++RH LV++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 810 SNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
S ++ EYM +GSL +L KY L + Q +D+ +AS + Y+ + +H
Sbjct: 249 SEEPI-YIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMN---YVH 303
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
DL+ +N+L+ ++ V ++DFG+++L++ + + + APE G + D
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 928 VYSFGILMIETFTR 941
V+SFGIL+ E T+
Sbjct: 364 VWSFGILLTELTTK 377
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 130/294 (44%), Gaps = 37/294 (12%)
Query: 1309 SRPTENNLLNTAALRRISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS 1368
S+P L A I + LRL LG G F V+ T+ T AIK
Sbjct: 250 SKPQTQGLAKDAW--EIPRESLRLEVK-------LGQGCFGEVWMGTWNGTTRVAIKTLK 300
Query: 1369 LQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHN-Y 1427
+ ++F E +VM+++RH L ++ + S ++ +YM +GSL +L
Sbjct: 301 -PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGK 358
Query: 1428 LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487
L + Q +D+ +A + Y+ + + +H DL+ +N+L+ +++V + DFG+A+L++
Sbjct: 359 YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 415
Query: 1488 VDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTR-RKPTDDMFTGEVCL 1546
+ + I + APE G + DV+SFGIL+ E T+ R P M EV
Sbjct: 416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL- 474
Query: 1547 KHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEER 1600
D V E + +C S+ L +C + PEER
Sbjct: 475 ---------DQV-----------ERGYRMPCPPECPESLHDLMCQCWRKEPEER 508
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 13/206 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V+ T VAIK G + ++F E +V++++RH LV++ +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 810 SNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
S ++ EYM +GSL +L KY L + Q +D+ +AS + Y+ + +H
Sbjct: 332 SEEPI-YIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMN---YVH 386
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
DL+ +N+L+ ++ V ++DFG+++L++ + + + APE G + D
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 928 VYSFGILMIETFTR-KMPTDEMFTGE 952
V+SFGIL+ E T+ ++P M E
Sbjct: 447 VWSFGILLTELTTKGRVPYPGMVNRE 472
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 94.0 bits (232), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 17/209 (8%)
Query: 746 FSESNL-----IGAGSFGSVYKATLP-----YGMNVAIKVFNLQLDGAIKSFDAECEVLR 795
F E +L +G G+FGSV G VA+K + ++ F+ E E+L+
Sbjct: 8 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 67
Query: 796 RVRHRNLVKIISSCSNHGFK--ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
++H N+VK C + G + LI+EY+P GSL +L HK ++ + L +
Sbjct: 68 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 127
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGY 911
+EYL IH +L N+L++++ + DFG++K+L D E + + +
Sbjct: 128 MEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFW 184
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFT 940
APE +E S DV+SFG+++ E FT
Sbjct: 185 YAPESLTESKFSVASDVWSFGVVLYELFT 213
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 1337 FSESNL-----LGTGIFSSVYKATF---ADGTNAAIKIFSLQE--DRALKSFDAECEVMR 1386
F E +L LG G F SV + D T + + LQ + L+ F+ E E+++
Sbjct: 8 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 67
Query: 1387 RIRHRNLAKIVSSCSNPGFK--ALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACA 1444
++H N+ K C + G + LI++Y+P GSL +L H ++ + L +
Sbjct: 68 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 127
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGY 1502
+EYL + IH +L N+L++++ +GDFG+ K+L D + + I +
Sbjct: 128 MEYLG---TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFW 184
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE +E S + DV+SFG+++ E T
Sbjct: 185 YAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 94.0 bits (232), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 110/230 (47%), Gaps = 18/230 (7%)
Query: 731 WRRISYQELQRLTDGFSE------SNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI 784
+ S+ EL+ +T+ F E N G G FG VYK + VA+K +D
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITT 61
Query: 785 ----KSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT--L 838
+ FD E +V + +H NLV+++ S+ L+ Y P GSL L T L
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 839 NIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDG-E 897
+ R I A+ + +LH H IH D+K +N+LLD+ A +SDFG+++ +
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 898 DSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDE 947
V + + T Y APE G ++ D+YSFG++++E T DE
Sbjct: 179 QXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 227
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 18/223 (8%)
Query: 1322 LRRISYQELRLATNGFSE------SNLLGTGIFSSVYKATFADGTNAAIK----IFSLQE 1371
S+ EL+ TN F E N G G F VYK + + T A+K + +
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITT 61
Query: 1372 DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL--L 1429
+ + FD E +V + +H NL +++ S+ L+ Y P GSL L + L
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 1430 NIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG-V 1488
+ R I A + +LH+ + IH D+K +N+LLD+ A + DFG+A+ +
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 1489 DSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ + + T Y APE G ++ D+YSFG++++E +T
Sbjct: 179 QXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIIT 220
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 99/191 (51%), Gaps = 12/191 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS-CS 810
IG G FG V G VA+K ++ D ++F AE V+ ++RH NLV+++
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 811 NHGFKALILEYMPQGSLEKWLYSH-KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
G ++ EYM +GSL +L S + L L +DV A+EYL + +H D
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 314
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L NVL+ +D VA +SDFG++K E S TQ + APE E ST DV+
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 370
Query: 930 SFGILMIETFT 940
SFGIL+ E ++
Sbjct: 371 SFGILLWEIYS 381
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 109/229 (47%), Gaps = 19/229 (8%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSS-CS 1401
+G G F V + G A+K ++ D ++F AE VM ++RH NL +++
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 1402 NPGFKALILQYMPQGSLEKWLYSHNY-LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
G ++ +YM +GSL +L S +L + L +DV A+EYL + +H D
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 314
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVY 1520
L NVL+ +D VA + DFG+ K S + T L + + APE E ST DV+
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLP-VKWTAPEALREKKFSTKSDVW 370
Query: 1521 SFGILMMETLT------RRKPTDDMFTG-EVCLKHWVEESLPDAVTDVI 1562
SFGIL+ E + R P D+ E K + P AV DV+
Sbjct: 371 SFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVM 419
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 130/294 (44%), Gaps = 37/294 (12%)
Query: 1309 SRPTENNLLNTAALRRISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS 1368
S+P L A I + LRL LG G F V+ T+ T AIK
Sbjct: 168 SKPQTQGLAKDAW--EIPRESLRLEVK-------LGQGCFGEVWMGTWNGTTRVAIKTLK 218
Query: 1369 LQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSH-NY 1427
+ + ++F E +VM+++RH L ++ + S ++ +YM +GSL +L
Sbjct: 219 -PGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGK 276
Query: 1428 LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487
L + Q +D+ +A + Y+ + + +H DL+ +N+L+ +++V + DFG+ +L++
Sbjct: 277 YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLGRLIED 333
Query: 1488 VDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTR-RKPTDDMFTGEVCL 1546
+ + I + APE G + DV+SFGIL+ E T+ R P M EV
Sbjct: 334 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL- 392
Query: 1547 KHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEER 1600
D V E + +C S+ L +C + PEER
Sbjct: 393 ---------DQV-----------ERGYRMPCPPECPESLHDLMCQCWRKDPEER 426
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 106/204 (51%), Gaps = 9/204 (4%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN 811
+G G FG V+ T VAIK + + ++F E +V++++RH LV++ + S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-NMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 812 HGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
++ EYM +GSL +L KY L + Q +D+ +AS + Y+ + +H D
Sbjct: 252 EPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMN---YVHRD 306
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L+ +N+L+ ++ V ++DFG+ +L++ + + + APE G + DV+
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 366
Query: 930 SFGILMIETFTR-KMPTDEMFTGE 952
SFGIL+ E T+ ++P M E
Sbjct: 367 SFGILLTELTTKGRVPYPGMVNRE 390
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant)
In Complex With N6-Benzyl Adp
Length = 452
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 130/294 (44%), Gaps = 37/294 (12%)
Query: 1309 SRPTENNLLNTAALRRISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS 1368
S+P L A I + LRL LG G F V+ T+ T AIK
Sbjct: 167 SKPQTQGLAKDAW--EIPRESLRLEVK-------LGQGCFGEVWMGTWNGTTRVAIKTLK 217
Query: 1369 LQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHN-Y 1427
+ ++F E +VM+++RH L ++ + S ++ +YM +GSL +L
Sbjct: 218 -PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVGEYMSKGSLLDFLKGETGK 275
Query: 1428 LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDG 1487
L + Q +D+ +A + Y+ + + +H DL+ +N+L+ +++V + DFG+A+L++
Sbjct: 276 YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 332
Query: 1488 VDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTR-RKPTDDMFTGEVCL 1546
+ + I + APE G + DV+SFGIL+ E T+ R P M EV
Sbjct: 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL- 391
Query: 1547 KHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEER 1600
D V E + +C S+ L +C + PEER
Sbjct: 392 ---------DQV-----------ERGYRMPCPPECPESLHDLMCQCWRKEPEER 425
Score = 86.7 bits (213), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V+ T VAIK G + ++F E +V++++RH LV++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 810 SNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
S ++ EYM +GSL +L KY L + Q +D+ +AS + Y+ + +H
Sbjct: 249 SEEPI-YIVGEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMN---YVH 303
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
DL+ +N+L+ ++ V ++DFG+++L++ + + + APE G + D
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 928 VYSFGILMIETFTR 941
V+SFGIL+ E T+
Sbjct: 364 VWSFGILLTELTTK 377
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 93.2 bits (230), Expect = 1e-18, Method: Composition-based stats.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 28/260 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ T+ T AIK + ++F E +VM+++RH L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 1403 PGFKALILQYMPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
++++YM +GSL +L L + Q +D+ +A + Y+ + + +H DL
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ +++V + DFG+A+L++ + + I + APE G + DV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 1522 FGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKK 1580
FGIL+ E T+ R P M EV D V E + +
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVL----------DQV-----------ERGYRMPCPPE 239
Query: 1581 CMSSVMSLALKCSEEIPEER 1600
C S+ L +C + PEER
Sbjct: 240 CPESLHDLMCQCWRKDPEER 259
Score = 87.8 bits (216), Expect = 5e-17, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 13/206 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V+ T VAIK G + ++F E +V++++RH LV++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 810 SNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
S +++EYM +GSL +L KY L + Q +D+ +AS + Y+ + +H
Sbjct: 83 SEEPI-YIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
DL+ +N+L+ ++ V ++DFG+++L++ + + + APE G + D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 928 VYSFGILMIETFTR-KMPTDEMFTGE 952
V+SFGIL+ E T+ ++P M E
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNRE 223
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 92.4 bits (228), Expect = 2e-18, Method: Composition-based stats.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 28/260 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ T+ T AIK + ++F E +VM+++RH L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 1403 PGFKALILQYMPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
++++YM +GSL +L L + Q +D+ +A + Y+ + + +H DL
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ +++V + DFG+A+L++ + + I + APE G + DV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 1522 FGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKK 1580
FGIL+ E T+ R P M EV D V E + +
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVL----------DQV-----------ERGYRMPCPPE 239
Query: 1581 CMSSVMSLALKCSEEIPEER 1600
C S+ L +C + PEER
Sbjct: 240 CPESLHDLMCQCWRKDPEER 259
Score = 87.0 bits (214), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 13/206 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V+ T VAIK G + ++F E +V++++RH LV++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 810 SNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
S +++EYM +GSL +L KY L + Q +D+ +AS + Y+ + +H
Sbjct: 83 SEEPI-YIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
DL+ +N+L+ ++ V ++DFG+++L++ + + + APE G + D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 928 VYSFGILMIETFTR-KMPTDEMFTGE 952
V+SFGIL+ E T+ ++P M E
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNRE 223
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 92.4 bits (228), Expect = 2e-18, Method: Composition-based stats.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 28/260 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ T+ T AIK + ++F E +VM+++RH L ++ + S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 1403 PGFKALILQYMPQGSLEKWLYSHN-YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
++ +YM +GSL +L L + Q +D+ +A + Y+ + + +H DL
Sbjct: 75 EPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 130
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ +++V + DFG+A+L++ + + I + APE G + DV+S
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 190
Query: 1522 FGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKK 1580
FGIL+ E T+ R P M EV D V E + +
Sbjct: 191 FGILLTELTTKGRVPYPGMVNREVL----------DQV-----------ERGYRMPCPPE 229
Query: 1581 CMSSVMSLALKCSEEIPEER 1600
C S+ L +C + PEER
Sbjct: 230 CPESLHDLMCQCWRKEPEER 249
Score = 87.0 bits (214), Expect = 8e-17, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 13/206 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V+ T VAIK G + ++F E +V++++RH LV++ +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 72
Query: 810 SNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
S ++ EYM +GSL +L KY L + Q +D+ +AS + Y+ + +H
Sbjct: 73 SEEPI-XIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMN---YVH 127
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
DL+ +N+L+ ++ V ++DFG+++L++ + + + APE G + D
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 928 VYSFGILMIETFTR-KMPTDEMFTGE 952
V+SFGIL+ E T+ ++P M E
Sbjct: 188 VWSFGILLTELTTKGRVPYPGMVNRE 213
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Pyrazolopyrimidine 5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Pyrazolopyrimidine 5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Dasatinib
Length = 286
Score = 92.4 bits (228), Expect = 2e-18, Method: Composition-based stats.
Identities = 71/260 (27%), Positives = 120/260 (46%), Gaps = 28/260 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ T+ T AIK + ++F E +VM++IRH L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 1403 PGFKALILQYMPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
++ +YM +GSL +L L + Q +D+ +A + Y+ + + +H DL
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ +++V + DFG+A+L++ + + I + APE G + DV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 1522 FGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKK 1580
FGIL+ E T+ R P M EV D V E + +
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVL----------DQV-----------ERGYRMPCPPE 239
Query: 1581 CMSSVMSLALKCSEEIPEER 1600
C S+ L +C + PEER
Sbjct: 240 CPESLHDLMCQCWRKDPEER 259
Score = 86.7 bits (213), Expect = 9e-17, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 13/206 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V+ T VAIK G + ++F E +V++++RH LV++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV 82
Query: 810 SNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
S ++ EYM +GSL +L KY L + Q +D+ +AS + Y+ + +H
Sbjct: 83 SEEPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
DL+ +N+L+ ++ V ++DFG+++L++ + + + APE G + D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 928 VYSFGILMIETFTR-KMPTDEMFTGE 952
V+SFGIL+ E T+ ++P M E
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNRE 223
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
Length = 294
Score = 91.7 bits (226), Expect = 3e-18, Method: Composition-based stats.
Identities = 72/283 (25%), Positives = 132/283 (46%), Gaps = 20/283 (7%)
Query: 1343 LGTGIFSSVYKA--TFADGTNAAIKIF--SLQEDRALKSFDAECEVMRRIRHRNLAKIVS 1398
LG G S+VY A T + A IF +++ LK F+ E ++ H+N+ ++
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIH 1458
L+++Y+ +L +++ SH L+++ ++ + L+ + + I+H
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQI---LDGIKHAHDMRIVH 134
Query: 1459 CDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGD 1518
D+KP N+L+D + + DFGIAK L + L T+ Y +PE D
Sbjct: 135 RDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTD 194
Query: 1519 VYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVID------ANLLSGEEE 1572
+YS GI++ E L P + + +KH +++S+P+ TDV +N++ E
Sbjct: 195 IYSIGIVLYEMLVGEPPFNGETAVSIAIKH-IQDSVPNVTTDVRKDIPQSLSNVILRATE 253
Query: 1573 ADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKT 1615
D A + K ++ + S + E R N + + L K+KT
Sbjct: 254 KDKANRYK---TIQEMKDDLSSVLHENRAN--EDVYELDKMKT 291
Score = 89.7 bits (221), Expect = 1e-17, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 14/209 (6%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIKVFNL---QLDGAIKSFDAECEVLRRVRHRNLVKIIS 807
+G G +VY A + VAIK + + + +K F+ E ++ H+N+V +I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 808 SCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
L++EY+ +L +++ SH L++ ++ + L+ + H H ++H
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQI---LDGIKHAHDMRIVH 134
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFGYMAPEYGSEGIVSTCG 926
D+KP N+L+D + + DFGI+K L E S+TQT L T Y +PE C
Sbjct: 135 RDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQYFSPEQAKGEATDECT 193
Query: 927 DVYSFGILMIETFTRKMPTDEMFTGETSL 955
D+YS GI++ E + P F GET++
Sbjct: 194 DIYSIGIVLYEMLVGEPP----FNGETAV 218
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 91.7 bits (226), Expect = 3e-18, Method: Composition-based stats.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 28/260 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ T+ T AIK + ++F E +VM+++RH L ++ + S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 1403 PGFKALILQYMPQGSLEKWLYSHN-YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
++ +YM +GSL +L L + Q +D+ +A + Y+ + + +H DL
Sbjct: 78 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 133
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ +++V + DFG+A+L++ + + I + APE G + DV+S
Sbjct: 134 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 193
Query: 1522 FGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKK 1580
FGIL+ E T+ R P M EV D V E + +
Sbjct: 194 FGILLTELTTKGRVPYPGMVNREVL----------DQV-----------ERGYRMPCPPE 232
Query: 1581 CMSSVMSLALKCSEEIPEER 1600
C S+ L +C + PEER
Sbjct: 233 CPESLHDLMCQCWRKEPEER 252
Score = 85.9 bits (211), Expect = 1e-16, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 13/206 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V+ T VAIK G + ++F E +V++++RH LV++ +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 75
Query: 810 SNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
S ++ EYM +GSL +L KY L + Q +D+ +AS + Y+ + +H
Sbjct: 76 SEEPI-YIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMN---YVH 130
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
DL+ +N+L+ ++ V ++DFG+++L++ + + + APE G + D
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 190
Query: 928 VYSFGILMIETFTR-KMPTDEMFTGE 952
V+SFGIL+ E T+ ++P M E
Sbjct: 191 VWSFGILLTELTTKGRVPYPGMVNRE 216
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc1
Length = 275
Score = 91.3 bits (225), Expect = 4e-18, Method: Composition-based stats.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 28/260 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ T+ T AIK + ++F E +VM+++RH L ++ + S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 1403 PGFKALILQYMPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
++ +YM +GSL +L L + Q +D+ +A + Y+ + + +H DL
Sbjct: 74 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 129
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ +++V + DFG+A+L++ + + I + APE G + DV+S
Sbjct: 130 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 189
Query: 1522 FGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKK 1580
FGIL+ E T+ R P M EV D V E + +
Sbjct: 190 FGILLTELTTKGRVPYPGMVNREVL----------DQV-----------ERGYRMPCPPE 228
Query: 1581 CMSSVMSLALKCSEEIPEER 1600
C S+ L +C + PEER
Sbjct: 229 CPESLHDLMCQCWRKDPEER 248
Score = 85.9 bits (211), Expect = 1e-16, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 13/206 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V+ T VAIK G + ++F E +V++++RH LV++ +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 71
Query: 810 SNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
S ++ EYM +GSL +L KY L + Q +D+ +AS + Y+ + +H
Sbjct: 72 SEEPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMN---YVH 126
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
DL+ +N+L+ ++ V ++DFG+++L++ + + + APE G + D
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 186
Query: 928 VYSFGILMIETFTR-KMPTDEMFTGE 952
V+SFGIL+ E T+ ++P M E
Sbjct: 187 VWSFGILLTELTTKGRVPYPGMVNRE 212
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 91.3 bits (225), Expect = 4e-18, Method: Composition-based stats.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 28/260 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ T+ T AIK + ++F E +VM+++RH L ++ + S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 1403 PGFKALILQYMPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
++ +YM +GSL +L L + Q +D+ +A + Y+ + + +H DL
Sbjct: 76 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 131
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ +++V + DFG+A+L++ + + I + APE G + DV+S
Sbjct: 132 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 191
Query: 1522 FGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKK 1580
FGIL+ E T+ R P M EV D V E + +
Sbjct: 192 FGILLTELTTKGRVPYPGMVNREVL----------DQV-----------ERGYRMPCPPE 230
Query: 1581 CMSSVMSLALKCSEEIPEER 1600
C S+ L +C + PEER
Sbjct: 231 CPESLHDLMCQCWRKDPEER 250
Score = 85.9 bits (211), Expect = 1e-16, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 13/206 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V+ T VAIK G + ++F E +V++++RH LV++ +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 73
Query: 810 SNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
S ++ EYM +GSL +L KY L + Q +D+ +AS + Y+ + +H
Sbjct: 74 SEEPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMN---YVH 128
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
DL+ +N+L+ ++ V ++DFG+++L++ + + + APE G + D
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 928 VYSFGILMIETFTR-KMPTDEMFTGE 952
V+SFGIL+ E T+ ++P M E
Sbjct: 189 VWSFGILLTELTTKGRVPYPGMVNRE 214
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex
With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In Complex
With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds That
Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds That
Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 91.3 bits (225), Expect = 4e-18, Method: Composition-based stats.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 28/260 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ T+ T AIK + ++F E +VM+++RH L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 1403 PGFKALILQYMPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
++ +YM +GSL +L L + Q +D+ +A + Y+ + + +H DL
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ +++V + DFG+A+L++ + + I + APE G + DV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 1522 FGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKK 1580
FGIL+ E T+ R P M EV D V E + +
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVL----------DQV-----------ERGYRMPCPPE 239
Query: 1581 CMSSVMSLALKCSEEIPEER 1600
C S+ L +C + PEER
Sbjct: 240 CPESLHDLMCQCWRKDPEER 259
Score = 85.9 bits (211), Expect = 1e-16, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 13/206 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V+ T VAIK G + ++F E +V++++RH LV++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 810 SNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
S ++ EYM +GSL +L KY L + Q +D+ +AS + Y+ + +H
Sbjct: 83 SEEPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
DL+ +N+L+ ++ V ++DFG+++L++ + + + APE G + D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 928 VYSFGILMIETFTR-KMPTDEMFTGE 952
V+SFGIL+ E T+ ++P M E
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNRE 223
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 91.3 bits (225), Expect = 4e-18, Method: Composition-based stats.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 28/260 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ T+ T AIK + ++F E +VM+++RH L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 1403 PGFKALILQYMPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
++ +YM +GSL +L L + Q +D+ +A + Y+ + + +H DL
Sbjct: 85 EPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ +++V + DFG+A+L++ + + I + APE G + DV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 1522 FGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKK 1580
FGIL+ E T+ R P M EV D V E + +
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVL----------DQV-----------ERGYRMPCPPE 239
Query: 1581 CMSSVMSLALKCSEEIPEER 1600
C S+ L +C + PEER
Sbjct: 240 CPESLHDLMCQCWRKDPEER 259
Score = 85.9 bits (211), Expect = 2e-16, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 13/206 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V+ T VAIK G + ++F E +V++++RH LV++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 810 SNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
S ++ EYM +GSL +L KY L + Q +D+ +AS + Y+ + +H
Sbjct: 83 SEEPI-YIVCEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
DL+ +N+L+ ++ V ++DFG+++L++ + + + APE G + D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 928 VYSFGILMIETFTR-KMPTDEMFTGE 952
V+SFGIL+ E T+ ++P M E
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNRE 223
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 90.9 bits (224), Expect = 6e-18, Method: Composition-based stats.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 28/260 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ T+ T AIK + ++F E +VM+++RH L ++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 1403 PGFKALILQYMPQGSLEKWLYSHN-YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
++ +YM +GSL +L L + Q +D+ +A + Y+ + + +H DL
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDL 137
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ +++V + DFG+A+L++ + + I + APE G + DV+S
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 1522 FGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKK 1580
FGIL+ E T+ R P M EV D V E + +
Sbjct: 198 FGILLTELTTKGRVPYPGMVNREVL----------DQV-----------ERGYRMPCPPE 236
Query: 1581 CMSSVMSLALKCSEEIPEER 1600
C S+ L +C + PEER
Sbjct: 237 CPESLHDLMCQCWRKEPEER 256
Score = 85.5 bits (210), Expect = 2e-16, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 13/206 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V+ T VAIK G + ++F E +V++++RH LV++ +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 810 SNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
S ++ EYM +GSL +L KY L + Q +D+ +AS + Y+ + +H
Sbjct: 80 SEEPI-YIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVERMN---YVH 134
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
DL+ +N+L+ ++ V ++DFG+++L++ + + + APE G + D
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 928 VYSFGILMIETFTR-KMPTDEMFTGE 952
V+SFGIL+ E T+ ++P M E
Sbjct: 195 VWSFGILLTELTTKGRVPYPGMVNRE 220
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Inhibitor
Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Inhibitor
Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 90.9 bits (224), Expect = 6e-18, Method: Composition-based stats.
Identities = 69/260 (26%), Positives = 120/260 (46%), Gaps = 28/260 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ T+ T AIK + ++F E +VM+++RH L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 1403 PGFKALILQYMPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
++++YM +G L +L L + Q +D+ +A + Y+ + + +H DL
Sbjct: 85 EPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ +++V + DFG+A+L++ + + I + APE G + DV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 1522 FGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKK 1580
FGIL+ E T+ R P M EV D V E + +
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVL----------DQV-----------ERGYRMPCPPE 239
Query: 1581 CMSSVMSLALKCSEEIPEER 1600
C S+ L +C + PEER
Sbjct: 240 CPESLHDLMCQCWRKDPEER 259
Score = 85.5 bits (210), Expect = 2e-16, Method: Composition-based stats.
Identities = 59/206 (28%), Positives = 107/206 (51%), Gaps = 13/206 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V+ T VAIK G + ++F E +V++++RH LV++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 810 SNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
S +++EYM +G L +L KY L + Q +D+ +AS + Y+ + +H
Sbjct: 83 SEEPI-YIVMEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
DL+ +N+L+ ++ V ++DFG+++L++ + + + APE G + D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 928 VYSFGILMIETFTR-KMPTDEMFTGE 952
V+SFGIL+ E T+ ++P M E
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNRE 223
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 90.5 bits (223), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 15/201 (7%)
Query: 752 IGAGSFGSVYKATLPYGMN---VAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKII 806
IG+G FG V+ L Y +N VAIK +GA+ + F E EV+ ++ H LV++
Sbjct: 15 IGSGQFGLVH---LGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 807 SSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVI 866
C L+ E+M G L +L + + + L + +DV + YL VI
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---SVI 125
Query: 867 HCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCG 926
H DL N L+ ++ V +SDFG+++ + + + T T + +PE S S+
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 927 DVYSFGILMIETFTR-KMPTD 946
DV+SFG+LM E F+ K+P +
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYE 206
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 5/203 (2%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
+G+G F V+ + + AIK + + + F E EVM ++ H L ++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLK 1462
L+ ++M G L +L + L E L + +DV + YL + S+IH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---SVIHRDLA 130
Query: 1463 PSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSF 1522
N L+ ++ V + DFG+ + + T T + + +PE S S+ DV+SF
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 190
Query: 1523 GILMMETLTRRK-PTDDMFTGEV 1544
G+LM E + K P ++ EV
Sbjct: 191 GVLMWEVFSEGKIPYENRSNSEV 213
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 90.5 bits (223), Expect = 8e-18, Method: Composition-based stats.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 28/260 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ T+ T AIK + ++F E +VM+++RH L ++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 1403 PGFKALILQYMPQGSLEKWLYSHN-YLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
++ +YM +GSL +L L + Q +D+ +A + Y+ + + +H DL
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDL 137
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ +++V + DFG+A+L++ + + I + APE G + DV+S
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 1522 FGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKK 1580
FGIL+ E T+ R P M EV D V E + +
Sbjct: 198 FGILLTELTTKGRVPYPGMVNREVL----------DQV-----------ERGYRMPCPPE 236
Query: 1581 CMSSVMSLALKCSEEIPEER 1600
C S+ L +C + PEER
Sbjct: 237 CPESLHDLMCQCWRKEPEER 256
Score = 84.7 bits (208), Expect = 3e-16, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 13/206 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V+ T VAIK G + ++F E +V++++RH LV++ +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 810 SNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
S ++ EYM +GSL +L KY L + Q +D+ +AS + Y+ + +H
Sbjct: 80 SEEPI-YIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVERMN---YVH 134
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
DL+ +N+L+ ++ V ++DFG+++L++ + + + APE G + D
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 928 VYSFGILMIETFTR-KMPTDEMFTGE 952
V+SFGIL+ E T+ ++P M E
Sbjct: 195 VWSFGILLTELTTKGRVPYPGMVNRE 220
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 90.1 bits (222), Expect = 8e-18, Method: Composition-based stats.
Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 28/260 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ T+ T AIK + ++F E +VM+++RH L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 1403 PGFKALILQYMPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
++ +YM +GSL +L L + Q +D+ +A + Y+ + + +H DL
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+N+L+ +++V + DFG+A+L++ + + I + APE G + DV+S
Sbjct: 141 AAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 1522 FGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKK 1580
FGIL+ E T+ R P M EV D V E + +
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVL----------DQV-----------ERGYRMPCPPE 239
Query: 1581 CMSSVMSLALKCSEEIPEER 1600
C S+ L +C + PEER
Sbjct: 240 CPESLHDLMCQCWRKDPEER 259
Score = 84.7 bits (208), Expect = 3e-16, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 13/206 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V+ T VAIK G + ++F E +V++++RH LV++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 810 SNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
S ++ EYM +GSL +L KY L + Q +D+ +AS + Y+ + +H
Sbjct: 83 SEEPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
DL +N+L+ ++ V ++DFG+++L++ + + + APE G + D
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 928 VYSFGILMIETFTR-KMPTDEMFTGE 952
V+SFGIL+ E T+ ++P M E
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNRE 223
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 15/201 (7%)
Query: 752 IGAGSFGSVYKATLPYGMN---VAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKII 806
IG+G FG V+ L Y +N VAIK +GA+ + F E EV+ ++ H LV++
Sbjct: 15 IGSGQFGLVH---LGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 807 SSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVI 866
C L+ E+M G L +L + + + L + +DV + YL VI
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVI 125
Query: 867 HCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCG 926
H DL N L+ ++ V +SDFG+++ + + + T T + +PE S S+
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 927 DVYSFGILMIETFTR-KMPTD 946
DV+SFG+LM E F+ K+P +
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYE 206
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 5/203 (2%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
+G+G F V+ + + AIK + + + F E EVM ++ H L ++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLK 1462
L+ ++M G L +L + L E L + +DV + YL + +IH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLA 130
Query: 1463 PSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSF 1522
N L+ ++ V + DFG+ + + T T + + +PE S S+ DV+SF
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 190
Query: 1523 GILMMETLTRRK-PTDDMFTGEV 1544
G+LM E + K P ++ EV
Sbjct: 191 GVLMWEVFSEGKIPYENRSNSEV 213
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 15/201 (7%)
Query: 752 IGAGSFGSVYKATLPYGMN---VAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKII 806
IG+G FG V+ L Y +N VAIK +GA+ + F E EV+ ++ H LV++
Sbjct: 13 IGSGQFGLVH---LGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLY 66
Query: 807 SSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVI 866
C L+ E+M G L +L + + + L + +DV + YL VI
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVI 123
Query: 867 HCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCG 926
H DL N L+ ++ V +SDFG+++ + + + T T + +PE S S+
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 927 DVYSFGILMIETFTR-KMPTD 946
DV+SFG+LM E F+ K+P +
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYE 204
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 5/203 (2%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
+G+G F V+ + + AIK + + + F E EVM ++ H L ++ C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLK 1462
L+ ++M G L +L + L E L + +DV + YL + +IH DL
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLA 128
Query: 1463 PSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSF 1522
N L+ ++ V + DFG+ + + T T + + +PE S S+ DV+SF
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 188
Query: 1523 GILMMETLTRRK-PTDDMFTGEV 1544
G+LM E + K P ++ EV
Sbjct: 189 GVLMWEVFSEGKIPYENRSNSEV 211
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 15/201 (7%)
Query: 752 IGAGSFGSVYKATLPYGMN---VAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKII 806
IG+G FG V+ L Y +N VAIK +GA+ + F E EV+ ++ H LV++
Sbjct: 18 IGSGQFGLVH---LGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLY 71
Query: 807 SSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVI 866
C L+ E+M G L +L + + + L + +DV + YL VI
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVI 128
Query: 867 HCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCG 926
H DL N L+ ++ V +SDFG+++ + + + T T + +PE S S+
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 927 DVYSFGILMIETFTR-KMPTD 946
DV+SFG+LM E F+ K+P +
Sbjct: 189 DVWSFGVLMWEVFSEGKIPYE 209
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 5/203 (2%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
+G+G F V+ + + AIK + + + F E EVM ++ H L ++ C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLK 1462
L+ ++M G L +L + L E L + +DV + YL + +IH DL
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLA 133
Query: 1463 PSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSF 1522
N L+ ++ V + DFG+ + + T T + + +PE S S+ DV+SF
Sbjct: 134 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 193
Query: 1523 GILMMETLTRRK-PTDDMFTGEV 1544
G+LM E + K P ++ EV
Sbjct: 194 GVLMWEVFSEGKIPYENRSNSEV 216
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 119/260 (45%), Gaps = 28/260 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ T+ T AIK + +SF E ++M++++H L ++ + S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 1403 PGFKALILQYMPQGSLEKWLYS-HNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
++ +YM +GSL +L L + +D+ VA + Y+ + + IH DL
Sbjct: 76 EPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDL 131
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ + ++ + DFG+A+L++ + + I + APE G + DV+S
Sbjct: 132 RSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 191
Query: 1522 FGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKK 1580
FGIL+ E +T+ R P M EV L E + +
Sbjct: 192 FGILLTELVTKGRVPYPGMNNREV---------------------LEQVERGYRMPCPQD 230
Query: 1581 CMSSVMSLALKCSEEIPEER 1600
C S+ L + C ++ PEER
Sbjct: 231 CPISLHELMIHCWKKDPEER 250
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 99/193 (51%), Gaps = 10/193 (5%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V+ T VAIK G + +SF E +++++++H LV++ +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK---PGTMSPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHC 868
S ++ EYM +GSL +L + L + +D+ VA+ + Y+ + IH
Sbjct: 74 SEEPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHR 129
Query: 869 DLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDV 928
DL+ +N+L+ + + ++DFG+++L++ + + + APE G + DV
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 929 YSFGILMIETFTR 941
+SFGIL+ E T+
Sbjct: 190 WSFGILLTELVTK 202
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 89.4 bits (220), Expect = 1e-17, Method: Composition-based stats.
Identities = 69/260 (26%), Positives = 119/260 (45%), Gaps = 28/260 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ T+ T AIK + ++F E +VM+++RH L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 1403 PGFKALILQYMPQGSLEKWLYSH-NYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
++ +YM +G L +L L + Q +D+ +A + Y+ + + +H DL
Sbjct: 85 EPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ +++V + DFG+A+L++ + + I + APE G + DV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 1522 FGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKK 1580
FGIL+ E T+ R P M EV D V E + +
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVL----------DQV-----------ERGYRMPCPPE 239
Query: 1581 CMSSVMSLALKCSEEIPEER 1600
C S+ L +C + PEER
Sbjct: 240 CPESLHDLMCQCWRKDPEER 259
Score = 84.0 bits (206), Expect = 6e-16, Method: Composition-based stats.
Identities = 59/206 (28%), Positives = 106/206 (51%), Gaps = 13/206 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V+ T VAIK G + ++F E +V++++RH LV++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 810 SNHGFKALILEYMPQGSLEKWLYSH--KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
S ++ EYM +G L +L KY L + Q +D+ +AS + Y+ + +H
Sbjct: 83 SEEPI-YIVTEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
DL+ +N+L+ ++ V ++DFG+++L++ + + + APE G + D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 928 VYSFGILMIETFTR-KMPTDEMFTGE 952
V+SFGIL+ E T+ ++P M E
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNRE 223
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 15/201 (7%)
Query: 752 IGAGSFGSVYKATLPYGMN---VAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKII 806
IG+G FG V+ L Y +N VAIK +GA+ + F E EV+ ++ H LV++
Sbjct: 16 IGSGQFGLVH---LGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLY 69
Query: 807 SSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVI 866
C L+ E+M G L +L + + + L + +DV + YL VI
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVI 126
Query: 867 HCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCG 926
H DL N L+ ++ V +SDFG+++ + + + T T + +PE S S+
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 927 DVYSFGILMIETFTR-KMPTD 946
DV+SFG+LM E F+ K+P +
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYE 207
Score = 80.1 bits (196), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 5/203 (2%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
+G+G F V+ + + AIK + + + F E EVM ++ H L ++ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLK 1462
L+ ++M G L +L + L E L + +DV + YL + +IH DL
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLA 131
Query: 1463 PSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSF 1522
N L+ ++ V + DFG+ + + T T + + +PE S S+ DV+SF
Sbjct: 132 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 191
Query: 1523 GILMMETLTRRK-PTDDMFTGEV 1544
G+LM E + K P ++ EV
Sbjct: 192 GVLMWEVFSEGKIPYENRSNSEV 214
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 89.0 bits (219), Expect = 2e-17, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 11/217 (5%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKS--FDAECEVLRRVRHRNLVKIISSC 809
+G G FG V +VAIK+ +G++ F E +V+ + H LV++ C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ +I EYM G L +L ++ QQ L++ DV A+EYL +H D
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRD 136
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L++D V +SDFG+S+ + ++ + + + PE S+ D++
Sbjct: 137 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 196
Query: 930 SFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
+FG+LM E ++ KMP + ET+ + + + LRL
Sbjct: 197 AFGVLMWEIYSLGKMPYERFTNSETA--EHIAQGLRL 231
Score = 79.0 bits (193), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 10/209 (4%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIF---SLQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
LGTG F V + + AIK+ S+ ED F E +VM + H L ++
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMMNLSHEKLVQLYGV 78
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
C+ +I +YM G L +L + +Q L++ DV A+EYL S +H
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 135
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDV 1519
DL N L++D V + DFG+++ + + + + + PE S+ D+
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 195
Query: 1520 YSFGILMMETLTRRKPTDDMFTGEVCLKH 1548
++FG+LM E + K + FT +H
Sbjct: 196 WAFGVLMWEIYSLGKMPYERFTNSETAEH 224
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 89.0 bits (219), Expect = 2e-17, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 11/217 (5%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKS--FDAECEVLRRVRHRNLVKIISSC 809
+G G FG V +VAIK+ +G++ F E +V+ + H LV++ C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ +I EYM G L +L ++ QQ L++ DV A+EYL +H D
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRD 129
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L++D V +SDFG+S+ + ++ + + + PE S+ D++
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 189
Query: 930 SFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
+FG+LM E ++ KMP + ET+ + + + LRL
Sbjct: 190 AFGVLMWEIYSLGKMPYERFTNSETA--EHIAQGLRL 224
Score = 79.0 bits (193), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 10/209 (4%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIF---SLQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
LGTG F V + + AIK+ S+ ED F E +VM + H L ++
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMMNLSHEKLVQLYGV 71
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
C+ +I +YM G L +L + +Q L++ DV A+EYL S +H
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 128
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDV 1519
DL N L++D V + DFG+++ + + + + + PE S+ D+
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 188
Query: 1520 YSFGILMMETLTRRKPTDDMFTGEVCLKH 1548
++FG+LM E + K + FT +H
Sbjct: 189 WAFGVLMWEIYSLGKMPYERFTNSETAEH 217
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 89.0 bits (219), Expect = 2e-17, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 11/217 (5%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKS--FDAECEVLRRVRHRNLVKIISSC 809
+G G FG V +VAIK+ +G++ F E +V+ + H LV++ C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ +I EYM G L +L ++ QQ L++ DV A+EYL +H D
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRD 130
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L++D V +SDFG+S+ + ++ + + + PE S+ D++
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 930 SFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
+FG+LM E ++ KMP + ET+ + + + LRL
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSETA--EHIAQGLRL 225
Score = 79.0 bits (193), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 10/209 (4%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIF---SLQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
LGTG F V + + AIK+ S+ ED F E +VM + H L ++
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMMNLSHEKLVQLYGV 72
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
C+ +I +YM G L +L + +Q L++ DV A+EYL S +H
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 129
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDV 1519
DL N L++D V + DFG+++ + + + + + PE S+ D+
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 189
Query: 1520 YSFGILMMETLTRRKPTDDMFTGEVCLKH 1548
++FG+LM E + K + FT +H
Sbjct: 190 WAFGVLMWEIYSLGKMPYERFTNSETAEH 218
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 89.0 bits (219), Expect = 2e-17, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 11/217 (5%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKS--FDAECEVLRRVRHRNLVKIISSC 809
+G G FG V +VAIK+ +G++ F E +V+ + H LV++ C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ +I EYM G L +L ++ QQ L++ DV A+EYL +H D
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRD 125
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L++D V +SDFG+S+ + ++ + + + PE S+ D++
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 185
Query: 930 SFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
+FG+LM E ++ KMP + ET+ + + + LRL
Sbjct: 186 AFGVLMWEIYSLGKMPYERFTNSETA--EHIAQGLRL 220
Score = 79.0 bits (193), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 10/209 (4%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIF---SLQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
LGTG F V + + AIK+ S+ ED F E +VM + H L ++
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMMNLSHEKLVQLYGV 67
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
C+ +I +YM G L +L + +Q L++ DV A+EYL S +H
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 124
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDV 1519
DL N L++D V + DFG+++ + + + + + PE S+ D+
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 184
Query: 1520 YSFGILMMETLTRRKPTDDMFTGEVCLKH 1548
++FG+LM E + K + FT +H
Sbjct: 185 WAFGVLMWEIYSLGKMPYERFTNSETAEH 213
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 102/202 (50%), Gaps = 11/202 (5%)
Query: 747 SESNLIGAGSFGSVYKATLPYG-----MNVAIKVFNLQLDGAIK-SFDAECEVLRRVRHR 800
+ +IGAG FG VYK L + VAIK + F E ++ + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG 860
N++++ S + +I EYM G+L+K+L ++ Q + ++ +A+ ++YL +
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 861 HPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLAT--FGYMAPEYGS 918
+ +H DL N+L++ + V +SDFG+S++L+ + T T + + APE S
Sbjct: 167 N---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 919 EGIVSTCGDVYSFGILMIETFT 940
++ DV+SFGI+M E T
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMT 245
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 1338 SESNLLGTGIFSSVYKA---TFADGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHR 1391
+ ++G G F VYK T + + I +L+ ++ F E +M + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 1392 NLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG 1451
N+ ++ S +I +YM G+L+K+L + ++ Q + ++ +A ++YL
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA-- 164
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA----TIGYMAPEY 1507
+ + +H DL N+L++ ++V + DFG++++L+ D + T T + I + APE
Sbjct: 165 -NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE--DDPEATYTTSGGKIPIRWTAPEA 221
Query: 1508 GSEGIVSTSGDVYSFGILMMETLT 1531
S +++ DV+SFGI+M E +T
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 9/206 (4%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V +VAIK+ +G++ F E +V+ + H LV++ C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ +I EYM G L +L ++ QQ L++ DV A+EYL +H D
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRD 145
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L++D V +SDFG+S+ + ++ + + + PE S+ D++
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 930 SFGILMIETFT-RKMPTDEMFTGETS 954
+FG+LM E ++ KMP + ET+
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSETA 231
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 10/209 (4%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIF---SLQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
LGTG F V + + AIK+ S+ ED F E +VM + H L ++
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED----EFIEEAKVMMNLSHEKLVQLYGV 87
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
C+ +I +YM G L +L + +Q L++ DV A+EYL S +H
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 144
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDV 1519
DL N L++D V + DFG+++ + + + + + PE S+ D+
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDI 204
Query: 1520 YSFGILMMETLTRRKPTDDMFTGEVCLKH 1548
++FG+LM E + K + FT +H
Sbjct: 205 WAFGVLMWEIYSLGKMPYERFTNSETAEH 233
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 88.6 bits (218), Expect = 3e-17, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 11/217 (5%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKS--FDAECEVLRRVRHRNLVKIISSC 809
+G G FG V +VAIK+ +G++ F E +V+ + H LV++ C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ +I EYM G L +L ++ QQ L++ DV A+EYL +H D
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRD 130
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L++D V +SDFG+S+ + ++ + + + PE S+ D++
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 930 SFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
+FG+LM E ++ KMP + ET+ + + + LRL
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSETA--EHIAQGLRL 225
Score = 78.6 bits (192), Expect = 3e-14, Method: Composition-based stats.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 10/209 (4%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIF---SLQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
LGTG F V + + AIK+ S+ ED F E +VM + H L ++
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMMNLSHEKLVQLYGV 72
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
C+ +I +YM G L +L + +Q L++ DV A+EYL S +H
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 129
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDV 1519
DL N L++D V + DFG+++ + + + + + PE S+ D+
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDI 189
Query: 1520 YSFGILMMETLTRRKPTDDMFTGEVCLKH 1548
++FG+LM E + K + FT +H
Sbjct: 190 WAFGVLMWEIYSLGKMPYERFTNSETAEH 218
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 749 SNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIK------------SFDAECEVLRR 796
++IG G+FG V KA IK L++D AIK F E EVL +
Sbjct: 30 QDVIGEGNFGQVLKAR--------IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK 81
Query: 797 V-RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKY---------------TLNI 840
+ H N++ ++ +C + G+ L +EY P G+L +L + TL+
Sbjct: 82 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 141
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
QQ L DVA ++YL IH DL N+L+ ++ VA ++DFG+S+ E V
Sbjct: 142 QQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR--GQEVYV 196
Query: 901 TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+TM +MA E + + +T DV+S+G+L+ E
Sbjct: 197 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 233
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 136/304 (44%), Gaps = 49/304 (16%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATFA-DG--TNAAIKI---FSLQEDRALKSFDAECEVM 1385
L N +++G G F V KA DG +AAIK ++ ++D + F E EV+
Sbjct: 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVL 79
Query: 1386 RRI-RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL---------------L 1429
++ H N+ ++ +C + G+ L ++Y P G+L +L L L
Sbjct: 80 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 139
Query: 1430 NIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD 1489
+ +Q L DVA ++YL Q IH DL N+L+ ++ VA + DFG+++ +
Sbjct: 140 SSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY- 195
Query: 1490 SMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
+K+TM + +MA E + + +T+ DV+S+G+L+ E ++ + G C +
Sbjct: 196 -VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP---YCGMTCAE-- 249
Query: 1550 VEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609
+ E LP + C V L +C E P ER + L +
Sbjct: 250 LYEKLPQGYR---------------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 294
Query: 1610 LKKI 1613
L ++
Sbjct: 295 LNRM 298
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 749 SNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIK------------SFDAECEVLRR 796
++IG G+FG V KA IK L++D AIK F E EVL +
Sbjct: 20 QDVIGEGNFGQVLKAR--------IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK 71
Query: 797 V-RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKY---------------TLNI 840
+ H N++ ++ +C + G+ L +EY P G+L +L + TL+
Sbjct: 72 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 131
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
QQ L DVA ++YL IH DL N+L+ ++ VA ++DFG+S+ E V
Sbjct: 132 QQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR--GQEVYV 186
Query: 901 TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+TM +MA E + + +T DV+S+G+L+ E
Sbjct: 187 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 223
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 136/304 (44%), Gaps = 49/304 (16%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATFA-DG--TNAAIKI---FSLQEDRALKSFDAECEVM 1385
L N +++G G F V KA DG +AAIK ++ ++D + F E EV+
Sbjct: 12 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVL 69
Query: 1386 RRI-RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL---------------L 1429
++ H N+ ++ +C + G+ L ++Y P G+L +L L L
Sbjct: 70 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 129
Query: 1430 NIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD 1489
+ +Q L DVA ++YL Q IH DL N+L+ ++ VA + DFG+++ +
Sbjct: 130 SSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY- 185
Query: 1490 SMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
+K+TM + +MA E + + +T+ DV+S+G+L+ E ++ + G C +
Sbjct: 186 -VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP---YCGMTCAE-- 239
Query: 1550 VEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609
+ E LP + C V L +C E P ER + L +
Sbjct: 240 LYEKLPQGYR---------------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 284
Query: 1610 LKKI 1613
L ++
Sbjct: 285 LNRM 288
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime Furopyridine
Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime Furopyridine
Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In Complex
With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In Complex
With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 12/219 (5%)
Query: 1323 RRISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQED--RALKSFDA 1380
RR S + + + +G+G F +VYK + + A+K+ ++ + L++F
Sbjct: 24 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKN 81
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMID 1440
E V+R+ RH N+ + + P A++ Q+ SL L+ + + +DI
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 1441 VACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA-T 1499
A ++YLH + SIIH DLK +N+ L +D+ +GDFG+A + Q L+ +
Sbjct: 141 TAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 197
Query: 1500 IGYMAPE---YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
I +MAPE + S DVY+FGI++ E +T + P
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 12/199 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQ--LDGAIKSFDAECEVLRRVRHRNLVKIISSC 809
IG+GSFG+VYK + +VA+K+ N+ +++F E VLR+ RH N++ +
Sbjct: 44 IGSGSFGTVYKGK--WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ A++ ++ SL L+ + + + +DI A ++YLH +IH D
Sbjct: 102 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 157
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA-TFGYMAPE---YGSEGIVSTC 925
LK +N+ L +D + DFG++ + Q L+ + +MAPE + S
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 926 GDVYSFGILMIETFTRKMP 944
DVY+FGI++ E T ++P
Sbjct: 218 SDVYAFGIVLYELMTGQLP 236
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQED--RALKSFDAECEVMRRIRHRNLAKIVSSC 1400
+G+G F +VYK + + A+K+ ++ + L++F E V+R+ RH N+ +
Sbjct: 20 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
+ P A++ Q+ SL L++ +++ +DI A ++YLH + SIIH D
Sbjct: 78 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 133
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA-TIGYMAPE---YGSEGIVSTS 1516
LK +N+ L +D +GDFG+A + Q L+ +I +MAPE S
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 1517 GDVYSFGILMMETLTRRKP 1535
DVY+FGI++ E +T + P
Sbjct: 194 SDVYAFGIVLYELMTGQLP 212
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSC 809
IG+GSFG+VYK + +VA+K+ N+ +++F E VLR+ RH N++ +
Sbjct: 20 IGSGSFGTVYKGK--WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ A++ ++ SL L++ + +++ +DI A ++YLH +IH D
Sbjct: 78 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 133
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA-TFGYMAPE---YGSEGIVSTC 925
LK +N+ L +D + DFG++ + Q L+ + +MAPE S
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 926 GDVYSFGILMIETFTRKMP 944
DVY+FGI++ E T ++P
Sbjct: 194 SDVYAFGIVLYELMTGQLP 212
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 12/219 (5%)
Query: 1323 RRISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQED--RALKSFDA 1380
RR S + + + +G+G F +VYK + + A+K+ ++ + L++F
Sbjct: 23 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKN 80
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMID 1440
E V+R+ RH N+ + + P A++ Q+ SL L+ + + +DI
Sbjct: 81 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 139
Query: 1441 VACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA-T 1499
A ++YLH + SIIH DLK +N+ L +D+ +GDFG+A + Q L+ +
Sbjct: 140 TAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 196
Query: 1500 IGYMAPE---YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
I +MAPE + S DVY+FGI++ E +T + P
Sbjct: 197 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 12/199 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQ--LDGAIKSFDAECEVLRRVRHRNLVKIISSC 809
IG+GSFG+VYK + +VA+K+ N+ +++F E VLR+ RH N++ +
Sbjct: 43 IGSGSFGTVYKGK--WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ A++ ++ SL L+ + + + +DI A ++YLH +IH D
Sbjct: 101 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 156
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA-TFGYMAPE---YGSEGIVSTC 925
LK +N+ L +D + DFG++ + Q L+ + +MAPE + S
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 216
Query: 926 GDVYSFGILMIETFTRKMP 944
DVY+FGI++ E T ++P
Sbjct: 217 SDVYAFGIVLYELMTGQLP 235
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 11/217 (5%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISSC 809
+G G FG V +VAIK+ +G++ F E +V+ + H LV++ C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ +I EYM G L +L ++ QQ L++ DV A+EYL +H D
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRD 145
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L++D V +SDFG+S+ + ++ + + + PE S+ D++
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 930 SFGILMIETFT-RKMPTDEMFTGETSLKKWVEESLRL 965
+FG+LM E ++ KMP + ET+ + + + LRL
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSETA--EHIAQGLRL 240
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 10/209 (4%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIF---SLQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
LGTG F V + + AIK+ S+ ED F E +VM + H L ++
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED----EFIEEAKVMMNLSHEKLVQLYGV 87
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
C+ +I +YM G L +L + +Q L++ DV A+EYL S +H
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 144
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDV 1519
DL N L++D V + DFG+++ + + + + + PE S+ D+
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 204
Query: 1520 YSFGILMMETLTRRKPTDDMFTGEVCLKH 1548
++FG+LM E + K + FT +H
Sbjct: 205 WAFGVLMWEIYSLGKMPYERFTNSETAEH 233
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 15/201 (7%)
Query: 752 IGAGSFGSVYKATLPYGMN---VAIKVFNLQLDGAIKS--FDAECEVLRRVRHRNLVKII 806
IG+G FG V+ L Y +N VAIK +G++ F E EV+ ++ H LV++
Sbjct: 35 IGSGQFGLVH---LGYWLNKDKVAIKTIK---EGSMSEDDFIEEAEVMMKLSHPKLVQLY 88
Query: 807 SSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVI 866
C L+ E+M G L +L + + + L + +DV + YL VI
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVI 145
Query: 867 HCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCG 926
H DL N L+ ++ V +SDFG+++ + + + T T + +PE S S+
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 927 DVYSFGILMIETFTR-KMPTD 946
DV+SFG+LM E F+ K+P +
Sbjct: 206 DVWSFGVLMWEVFSEGKIPYE 226
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 11/206 (5%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIF---SLQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G F V+ + + AIK S+ ED F E EVM ++ H L ++
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED----DFIEEAEVMMKLSHPKLVQLYGV 90
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
C L+ ++M G L +L + L E L + +DV + YL + +IH
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHR 147
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDV 1519
DL N L+ ++ V + DFG+ + + T T + + +PE S S+ DV
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 1520 YSFGILMMETLTRRK-PTDDMFTGEV 1544
+SFG+LM E + K P ++ EV
Sbjct: 208 WSFGVLMWEVFSEGKIPYENRSNSEV 233
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 87.4 bits (215), Expect = 6e-17, Method: Composition-based stats.
Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 9/208 (4%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKS--FDAECEVLRRVRHRNLVKIISSC 809
+G+G FG V +VA+K+ +G++ F E + + ++ H LVK C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK---EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
S ++ EY+ G L +L SH L Q L++ DV + +L IH D
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRD 129
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+D D +SDFG+++ + + V+ T + APE S+ DV+
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVW 189
Query: 930 SFGILMIETFTR-KMPTDEMFTGETSLK 956
+FGILM E F+ KMP D E LK
Sbjct: 190 AFGILMWEVFSLGKMPYDLYTNSEVVLK 217
Score = 84.0 bits (206), Expect = 6e-16, Method: Composition-based stats.
Identities = 73/280 (26%), Positives = 117/280 (41%), Gaps = 36/280 (12%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIF---SLQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
LG+G F V + + A+K+ S+ ED F E + M ++ H L K
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDE----FFQEAQTMMKLSHPKLVKFYGV 71
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
CS ++ +Y+ G L +L SH L Q L++ DV + +L S IH
Sbjct: 72 CSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHR 128
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDV 1519
DL N L+D D+ + DFG+ + + + T + + APE S+ DV
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 1520 YSFGILMMETLTRRKPTDDMFT-GEVCLKHWVEESL--PDAVTDVIDANLLSGEEEADIA 1576
++FGILM E + K D++T EV LK L P +D I
Sbjct: 189 WAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTI-------------- 234
Query: 1577 AKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTK 1616
+ C E+PE+R + L++++ ++ K
Sbjct: 235 ---------YQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 87.4 bits (215), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 120/254 (47%), Gaps = 37/254 (14%)
Query: 1311 PTENNLLNTAALRRISYQEL------RLATNGFSESNLLGTGIFSSVYKATFADG----- 1359
PT NL L +S EL L + LG G F V A A G
Sbjct: 39 PTTENLYFQGMLAGVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAE-AIGLDKDK 97
Query: 1360 ----TNAAIKIF-SLQEDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKALILQYM 1413
T A+K+ S ++ L +E E+M+ I +H+N+ ++ +C+ G +I++Y
Sbjct: 98 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 157
Query: 1414 PQGSLEKWL---------YSHNYLLNIEQRLDIMIDVACA------LEYLHQGYSTSIIH 1458
+G+L ++L YS+N N E++L V+CA +EYL S IH
Sbjct: 158 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIH 214
Query: 1459 CDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-LATIGYMAPEYGSEGIVSTSG 1517
DL NVL+ +D V + DFG+A+ + +D K+T + +MAPE + I +
Sbjct: 215 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 274
Query: 1518 DVYSFGILMMETLT 1531
DV+SFG+L+ E T
Sbjct: 275 DVWSFGVLLWEIFT 288
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 41/233 (17%)
Query: 752 IGAGSFGSVYKATLPYGMN---------VAIKVFNLQLDGAIKSFD---AECEVLRRV-R 798
+G G+FG V A G++ VA+K+ L+ D K +E E+++ + +
Sbjct: 77 LGEGAFGQVVLAEA-IGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGK 133
Query: 799 HRNLVKIISSCSNHGFKALILEYMPQGSLEKWL---------YSHKYTLNIQQRL---DI 846
H+N++ ++ +C+ G +I+EY +G+L ++L YS+ + N +++L D+
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 847 M---IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT 903
+ VA +EYL IH DL NVL+ +D V ++DFG+++ + D +T
Sbjct: 194 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 904 MT-LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + I + DV+SFG+L+ E FT +P +E+F
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 303
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 87.0 bits (214), Expect = 9e-17, Method: Composition-based stats.
Identities = 72/220 (32%), Positives = 107/220 (48%), Gaps = 23/220 (10%)
Query: 734 ISYQELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEV 793
I Y+E++ ++G G+FG V KA +VAIK ++ + K+F E
Sbjct: 6 IDYKEIE-------VEEVVGRGAFGVVCKAKW-RAKDVAIK--QIESESERKAFIVELRQ 55
Query: 794 LRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK----YTLNIQQRLDIMID 849
L RV H N+VK+ +C N L++EY GSL L+ + YT + +
Sbjct: 56 LSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYT--AAHAMSWCLQ 111
Query: 850 VASALEYLHHGHPTPVIHCDLKPSNVLL-DDDTVAHLSDFGISKLLDGEDSVTQTMTLAT 908
+ + YLH P +IH DLKP N+LL TV + DFG + D + +T A
Sbjct: 112 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA--CDIQTHMTNNKGSA- 168
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEM 948
+MAPE S DV+S+GI++ E TR+ P DE+
Sbjct: 169 -AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 207
Score = 85.5 bits (210), Expect = 2e-16, Method: Composition-based stats.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 19/223 (8%)
Query: 1320 AALRRISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFD 1379
+L I Y+E+ + ++G G F V KA + + AIK + +R K+F
Sbjct: 1 GSLHMIDYKEIEV-------EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFI 50
Query: 1380 AECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL--LNIEQRLDI 1437
E + R+ H N+ K+ +C NP L+++Y GSL L+ L +
Sbjct: 51 VELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 108
Query: 1438 MIDVACALEYLHQGYSTSIIHCDLKPSNVLL-DDDMVAHLGDFGIAKLLDGVDSMKQTMT 1496
+ + + YLH ++IH DLKP N+LL V + DFG A + T
Sbjct: 109 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI----QTHMTNN 164
Query: 1497 LATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDM 1539
+ +MAPE S DV+S+GI++ E +TRRKP D++
Sbjct: 165 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 207
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 87.0 bits (214), Expect = 9e-17, Method: Composition-based stats.
Identities = 72/220 (32%), Positives = 107/220 (48%), Gaps = 23/220 (10%)
Query: 734 ISYQELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEV 793
I Y+E++ ++G G+FG V KA +VAIK ++ + K+F E
Sbjct: 5 IDYKEIE-------VEEVVGRGAFGVVCKAKW-RAKDVAIK--QIESESERKAFIVELRQ 54
Query: 794 LRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK----YTLNIQQRLDIMID 849
L RV H N+VK+ +C N L++EY GSL L+ + YT + +
Sbjct: 55 LSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYT--AAHAMSWCLQ 110
Query: 850 VASALEYLHHGHPTPVIHCDLKPSNVLL-DDDTVAHLSDFGISKLLDGEDSVTQTMTLAT 908
+ + YLH P +IH DLKP N+LL TV + DFG + D + +T A
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA--CDIQTHMTNNKGSA- 167
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEM 948
+MAPE S DV+S+GI++ E TR+ P DE+
Sbjct: 168 -AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206
Score = 85.5 bits (210), Expect = 2e-16, Method: Composition-based stats.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 19/222 (8%)
Query: 1321 ALRRISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDA 1380
+L I Y+E+ + ++G G F V KA + + AIK + +R K+F
Sbjct: 1 SLHMIDYKEIEV-------EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIV 50
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL--LNIEQRLDIM 1438
E + R+ H N+ K+ +C NP L+++Y GSL L+ L +
Sbjct: 51 ELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC 108
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLL-DDDMVAHLGDFGIAKLLDGVDSMKQTMTL 1497
+ + + YLH ++IH DLKP N+LL V + DFG A + T
Sbjct: 109 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI----QTHMTNNK 164
Query: 1498 ATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDM 1539
+ +MAPE S DV+S+GI++ E +TRRKP D++
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 86.7 bits (213), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 112/223 (50%), Gaps = 20/223 (8%)
Query: 1323 RRISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQED--RALKSFDA 1380
RR S + + + +G+G F +VYK + + A+K+ ++ + L++F
Sbjct: 16 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 73
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMID 1440
E V+R+ RH N+ + + P A++ Q+ SL Y H +++ + + +ID
Sbjct: 74 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSL----YHHLHIIETKFEMIKLID 128
Query: 1441 VA----CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT 1496
+A ++YLH + SIIH DLK +N+ L +D+ +GDFG+A Q
Sbjct: 129 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 185
Query: 1497 LA-TIGYMAPE---YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
L+ +I +MAPE + S DVY+FGI++ E +T + P
Sbjct: 186 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 12/199 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQ--LDGAIKSFDAECEVLRRVRHRNLVKIISSC 809
IG+GSFG+VYK + +VA+K+ N+ +++F E VLR+ RH N++ +
Sbjct: 36 IGSGSFGTVYKGK--WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ A++ ++ SL L+ + + + +DI A ++YLH +IH D
Sbjct: 94 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 149
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA-TFGYMAPE---YGSEGIVSTC 925
LK +N+ L +D + DFG++ Q L+ + +MAPE + S
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 209
Query: 926 GDVYSFGILMIETFTRKMP 944
DVY+FGI++ E T ++P
Sbjct: 210 SDVYAFGIVLYELMTGQLP 228
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203
Length = 292
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQED--RALKSFDAECEVMRRIRHRNLAKIVSSC 1400
+G+G F +VYK + + A+K+ ++ + L++F E V+R+ RH N+ +
Sbjct: 32 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
+ P A++ Q+ SL L++ +++ +DI A ++YLH + SIIH D
Sbjct: 90 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA-TIGYMAPE---YGSEGIVSTS 1516
LK +N+ L +D +GDFG+A Q L+ +I +MAPE S
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 1517 GDVYSFGILMMETLTRRKP 1535
DVY+FGI++ E +T + P
Sbjct: 206 SDVYAFGIVLYELMTGQLP 224
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 12/199 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSC 809
IG+GSFG+VYK + +VA+K+ N+ +++F E VLR+ RH N++ +
Sbjct: 32 IGSGSFGTVYKGK--WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ A++ ++ SL L++ + +++ +DI A ++YLH +IH D
Sbjct: 90 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA-TFGYMAPE---YGSEGIVSTC 925
LK +N+ L +D + DFG++ Q L+ + +MAPE S
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 926 GDVYSFGILMIETFTRKMP 944
DVY+FGI++ E T ++P
Sbjct: 206 SDVYAFGIVLYELMTGQLP 224
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 20/203 (9%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQED--RALKSFDAECEVMRRIRHRNLAKIVSSC 1400
+G+G F +VYK + + A+K+ ++ + L++F E V+R+ RH N+ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVA----CALEYLHQGYSTSI 1456
+ P A++ Q+ SL Y H +++ + + +ID+A ++YLH + SI
Sbjct: 74 TKPQL-AIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSI 125
Query: 1457 IHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA-TIGYMAPE---YGSEGI 1512
IH DLK +N+ L +D+ +GDFG+A + Q L+ +I +MAPE +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
S DVY+FGI++ E +T + P
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 12/199 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSC 809
IG+GSFG+VYK + +VA+K+ N+ +++F E VLR+ RH N++ +
Sbjct: 16 IGSGSFGTVYKGK--WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ A++ ++ SL L+ + + + +DI A ++YLH +IH D
Sbjct: 74 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA-TFGYMAPE---YGSEGIVSTC 925
LK +N+ L +D + DFG++ + Q L+ + +MAPE + S
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 926 GDVYSFGILMIETFTRKMP 944
DVY+FGI++ E T ++P
Sbjct: 190 SDVYAFGIVLYELMTGQLP 208
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 749 SNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIK------------SFDAECEVLRR 796
++IG G+FG V KA IK L++D AIK F E EVL +
Sbjct: 27 QDVIGEGNFGQVLKAR--------IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK 78
Query: 797 V-RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKY---------------TLNI 840
+ H N++ ++ +C + G+ L +EY P G+L +L + TL+
Sbjct: 79 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 138
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
QQ L DVA ++YL IH +L N+L+ ++ VA ++DFG+S+ E V
Sbjct: 139 QQLLHFAADVARGMDYLSQKQ---FIHRNLAARNILVGENYVAKIADFGLSR--GQEVYV 193
Query: 901 TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+TM +MA E + + +T DV+S+G+L+ E
Sbjct: 194 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 230
Score = 80.5 bits (197), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 136/304 (44%), Gaps = 49/304 (16%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATFA-DG--TNAAIKI---FSLQEDRALKSFDAECEVM 1385
L N +++G G F V KA DG +AAIK ++ ++D + F E EV+
Sbjct: 19 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVL 76
Query: 1386 RRI-RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL---------------L 1429
++ H N+ ++ +C + G+ L ++Y P G+L +L L L
Sbjct: 77 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 136
Query: 1430 NIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD 1489
+ +Q L DVA ++YL Q IH +L N+L+ ++ VA + DFG+++ +
Sbjct: 137 SSQQLLHFAADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSRGQEVY- 192
Query: 1490 SMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
+K+TM + +MA E + + +T+ DV+S+G+L+ E ++ + G C +
Sbjct: 193 -VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP---YCGMTCAE-- 246
Query: 1550 VEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609
+ E LP + C V L +C E P ER + L +
Sbjct: 247 LYEKLPQGYR---------------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 291
Query: 1610 LKKI 1613
L ++
Sbjct: 292 LNRM 295
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene
Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene
Inhibitor
Length = 282
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 20/203 (9%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQED--RALKSFDAECEVMRRIRHRNLAKIVSSC 1400
+G+G F +VYK + + A+K+ ++ + L++F E V+R+ RH N+ +
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVA----CALEYLHQGYSTSI 1456
+ P A++ Q+ SL Y H +++ + + +ID+A ++YLH + SI
Sbjct: 76 TKPQL-AIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSI 127
Query: 1457 IHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA-TIGYMAPE---YGSEGI 1512
IH DLK +N+ L +D+ +GDFG+A + Q L+ +I +MAPE +
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
S DVY+FGI++ E +T + P
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQLP 210
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 12/199 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQ--LDGAIKSFDAECEVLRRVRHRNLVKIISSC 809
IG+GSFG+VYK + +VA+K+ N+ +++F E VLR+ RH N++ +
Sbjct: 18 IGSGSFGTVYKGK--WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ A++ ++ SL L+ + + + +DI A ++YLH +IH D
Sbjct: 76 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 131
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA-TFGYMAPE---YGSEGIVSTC 925
LK +N+ L +D + DFG++ + Q L+ + +MAPE + S
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 191
Query: 926 GDVYSFGILMIETFTRKMP 944
DVY+FGI++ E T ++P
Sbjct: 192 SDVYAFGIVLYELMTGQLP 210
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 12/219 (5%)
Query: 1323 RRISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQED--RALKSFDA 1380
RR S + + + +G+G F +VYK + + A+K+ ++ + L++F
Sbjct: 24 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKN 81
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMID 1440
E V+R+ RH N+ + + P A++ Q+ SL L+ + + +DI
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 1441 VACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA-T 1499
A ++YLH + SIIH DLK +N+ L +D+ +GDFG+A Q L+ +
Sbjct: 141 TAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 197
Query: 1500 IGYMAPE---YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
I +MAPE + S DVY+FGI++ E +T + P
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 12/199 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQ--LDGAIKSFDAECEVLRRVRHRNLVKIISSC 809
IG+GSFG+VYK + +VA+K+ N+ +++F E VLR+ RH N++ +
Sbjct: 44 IGSGSFGTVYKGK--WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ A++ ++ SL L+ + + + +DI A ++YLH +IH D
Sbjct: 102 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 157
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA-TFGYMAPE---YGSEGIVSTC 925
LK +N+ L +D + DFG++ Q L+ + +MAPE + S
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 926 GDVYSFGILMIETFTRKMP 944
DVY+FGI++ E T ++P
Sbjct: 218 SDVYAFGIVLYELMTGQLP 236
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQED--RALKSFDAECEVMRRIRHRNLAKIVSSC 1400
+G+G F +VYK + + A+K+ ++ + L++F E V+R+ RH N+ +
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
+ P A++ Q+ SL L+ + + +DI A ++YLH + SIIH D
Sbjct: 79 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA-TIGYMAPE---YGSEGIVSTS 1516
LK +N+ L +D+ +GDFG+A + Q L+ +I +MAPE + S
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 1517 GDVYSFGILMMETLTRRKP 1535
DVY+FGI++ E +T + P
Sbjct: 195 SDVYAFGIVLYELMTGQLP 213
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 12/199 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSC 809
IG+GSFG+VYK + +VA+K+ N+ +++F E VLR+ RH N++ +
Sbjct: 21 IGSGSFGTVYKGK--WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ A++ ++ SL L+ + + + +DI A ++YLH +IH D
Sbjct: 79 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA-TFGYMAPE---YGSEGIVSTC 925
LK +N+ L +D + DFG++ + Q L+ + +MAPE + S
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 926 GDVYSFGILMIETFTRKMP 944
DVY+FGI++ E T ++P
Sbjct: 195 SDVYAFGIVLYELMTGQLP 213
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A
[1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With A
[1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQED--RALKSFDAECEVMRRIRHRNLAKIVSSC 1400
+G+G F +VYK + + A+K+ ++ + L++F E V+R+ RH N+ +
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
+ P A++ Q+ SL L+ + + +DI A ++YLH + SIIH D
Sbjct: 79 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA-TIGYMAPE---YGSEGIVSTS 1516
LK +N+ L +D+ +GDFG+A + Q L+ +I +MAPE + S
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 1517 GDVYSFGILMMETLTRRKP 1535
DVY+FGI++ E +T + P
Sbjct: 195 SDVYAFGIVLYELMTGQLP 213
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 12/199 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSC 809
IG+GSFG+VYK + +VA+K+ N+ +++F E VLR+ RH N++ +
Sbjct: 21 IGSGSFGTVYKGK--WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ A++ ++ SL L+ + + + +DI A ++YLH +IH D
Sbjct: 79 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA-TFGYMAPE---YGSEGIVSTC 925
LK +N+ L +D + DFG++ + Q L+ + +MAPE + S
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 926 GDVYSFGILMIETFTRKMP 944
DVY+FGI++ E T ++P
Sbjct: 195 SDVYAFGIVLYELMTGQLP 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
Length = 285
Score = 86.3 bits (212), Expect = 1e-16, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 7/204 (3%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ + T A+K Q + +F AE +M++++H+ L ++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
+I +YM GSL +L + + + L I + LD+ +A + ++ + + IH DL
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 141
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ D + + DFG+A+L++ + + I + APE + G + DV+S
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 201
Query: 1522 FGILMMETLTR-RKPTDDMFTGEV 1544
FGIL+ E +T R P M EV
Sbjct: 202 FGILLTEIVTHGRIPYPGMTNPEV 225
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 7/203 (3%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN 811
+GAG FG V+ VA+K Q + +F AE ++++++H+ LV++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 812 HGFKALILEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+I EYM GSL +L + L I + LD+ +A + ++ + IH DL
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 141
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
+ +N+L+ D ++DFG+++L++ + + + APE + G + DV+S
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 201
Query: 931 FGILMIETFTR-KMPTDEMFTGE 952
FGIL+ E T ++P M E
Sbjct: 202 FGILLTEIVTHGRIPYPGMTNPE 224
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 119/260 (45%), Gaps = 28/260 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ + T A+K Q + +F AE +M++++H+ L ++ + +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
+I +YM GSL +L + + + L I + LD+ +A + ++ + + IH DL
Sbjct: 89 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 144
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ D + + DFG+A+L++ + + I + APE + G + DV+S
Sbjct: 145 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 204
Query: 1522 FGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKK 1580
FGIL+ E +T R P M EV NL G +
Sbjct: 205 FGILLTEIVTHGRIPYPGMTNPEVI------------------QNLERG---YRMVRPDN 243
Query: 1581 CMSSVMSLALKCSEEIPEER 1600
C + L C +E PE+R
Sbjct: 244 CPEELYQLMRLCWKERPEDR 263
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN 811
+GAG FG V+ VA+K Q + +F AE ++++++H+ LV++ + +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 812 HGFKALILEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+I EYM GSL +L + L I + LD+ +A + ++ + IH DL
Sbjct: 89 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 144
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
+ +N+L+ D ++DFG+++L++ + + + APE + G + DV+S
Sbjct: 145 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 204
Query: 931 FGILMIETFT 940
FGIL+ E T
Sbjct: 205 FGILLTEIVT 214
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 119/260 (45%), Gaps = 28/260 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ + T A+K Q + +F AE +M++++H+ L ++ + +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
+I +YM GSL +L + + + L I + LD+ +A + ++ + + IH DL
Sbjct: 88 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 143
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ D + + DFG+A+L++ + + I + APE + G + DV+S
Sbjct: 144 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 203
Query: 1522 FGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKK 1580
FGIL+ E +T R P M EV NL G +
Sbjct: 204 FGILLTEIVTHGRIPYPGMTNPEVI------------------QNLERG---YRMVRPDN 242
Query: 1581 CMSSVMSLALKCSEEIPEER 1600
C + L C +E PE+R
Sbjct: 243 CPEELYQLMRLCWKERPEDR 262
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN 811
+GAG FG V+ VA+K Q + +F AE ++++++H+ LV++ + +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 812 HGFKALILEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+I EYM GSL +L + L I + LD+ +A + ++ + IH DL
Sbjct: 88 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 143
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
+ +N+L+ D ++DFG+++L++ + + + APE + G + DV+S
Sbjct: 144 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 203
Query: 931 FGILMIETFT 940
FGIL+ E T
Sbjct: 204 FGILLTEIVT 213
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032
Length = 289
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQED--RALKSFDAECEVMRRIRHRNLAKIVSSC 1400
+G+G F +VYK + + A+K+ ++ + L++F E V+R+ RH N+ +
Sbjct: 32 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
+ P A++ Q+ SL L++ +++ +DI A ++YLH + SIIH D
Sbjct: 90 TAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA-TIGYMAPE---YGSEGIVSTS 1516
LK +N+ L +D +GDFG+A Q L+ +I +MAPE S
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 1517 GDVYSFGILMMETLTRRKP 1535
DVY+FGI++ E +T + P
Sbjct: 206 SDVYAFGIVLYELMTGQLP 224
Score = 84.0 bits (206), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 12/199 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSC 809
IG+GSFG+VYK + +VA+K+ N+ +++F E VLR+ RH N++ +
Sbjct: 32 IGSGSFGTVYKGK--WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ A++ ++ SL L++ + +++ +DI A ++YLH +IH D
Sbjct: 90 TAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA-TFGYMAPE---YGSEGIVSTC 925
LK +N+ L +D + DFG++ Q L+ + +MAPE S
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 926 GDVYSFGILMIETFTRKMP 944
DVY+FGI++ E T ++P
Sbjct: 206 SDVYAFGIVLYELMTGQLP 224
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 20/203 (9%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQED--RALKSFDAECEVMRRIRHRNLAKIVSSC 1400
+G+G F +VYK + + A+K+ ++ + L++F E V+R+ RH N+ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVA----CALEYLHQGYSTSI 1456
+ P A++ Q+ SL Y H +++ + + +ID+A ++YLH + SI
Sbjct: 74 TAPQL-AIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSI 125
Query: 1457 IHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA-TIGYMAPE---YGSEGI 1512
IH DLK +N+ L +D+ +GDFG+A + Q L+ +I +MAPE +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
S DVY+FGI++ E +T + P
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 12/199 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSC 809
IG+GSFG+VYK + +VA+K+ N+ +++F E VLR+ RH N++ +
Sbjct: 16 IGSGSFGTVYKGK--WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ A++ ++ SL L+ + + + +DI A ++YLH +IH D
Sbjct: 74 TAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA-TFGYMAPE---YGSEGIVSTC 925
LK +N+ L +D + DFG++ + Q L+ + +MAPE + S
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 926 GDVYSFGILMIETFTRKMP 944
DVY+FGI++ E T ++P
Sbjct: 190 SDVYAFGIVLYELMTGQLP 208
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
Length = 317
Score = 85.9 bits (211), Expect = 2e-16, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 101/190 (53%), Gaps = 21/190 (11%)
Query: 1360 TNAAIKIF-SLQEDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKALILQYMPQGS 1417
T A+K+ S ++ L +E E+M+ I +H+N+ ++ +C+ G +I++Y +G+
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 1418 LEKWL---------YSHNYLLNIEQRLDIMIDVACA------LEYLHQGYSTSIIHCDLK 1462
L ++L YS+N N E++L V+CA +EYL S IH DL
Sbjct: 121 LREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLA 177
Query: 1463 PSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-LATIGYMAPEYGSEGIVSTSGDVYS 1521
NVL+ +D V + DFG+A+ + +D K+T + +MAPE + I + DV+S
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
Query: 1522 FGILMMETLT 1531
FG+L+ E T
Sbjct: 238 FGVLLWEIFT 247
Score = 77.0 bits (188), Expect = 9e-14, Method: Composition-based stats.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 41/233 (17%)
Query: 752 IGAGSFGSVYKATLPYGMN---------VAIKVFNLQLDGAIKSFD---AECEVLRRV-R 798
+G G+FG V A G++ VA+K+ L+ D K +E E+++ + +
Sbjct: 36 LGEGAFGQVVLAE-AIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGK 92
Query: 799 HRNLVKIISSCSNHGFKALILEYMPQGSLEKWL---------YSHKYTLNIQQRL---DI 846
H+N++ ++ +C+ G +I+EY +G+L ++L YS+ + N +++L D+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 847 M---IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT 903
+ VA +EYL IH DL NVL+ +D V ++DFG+++ + D +T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 904 MT-LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + I + DV+SFG+L+ E FT +P +E+F
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 85.9 bits (211), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 6/194 (3%)
Query: 752 IGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G +G VY+ Y + VA+K + ++ F E V++ ++H NLV+++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 811 NHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+I+E+M G+L +L ++ +N L + ++SA+EYL + IH D
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 137
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+ ++ + ++DFG+S+L+ G+ + APE + S DV+
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 197
Query: 930 SFGILMIETFTRKM 943
+FG+L+ E T M
Sbjct: 198 AFGVLLWEIATYGM 211
Score = 77.8 bits (190), Expect = 4e-14, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 6/208 (2%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEV 1384
+Y + + + + LG G + VY+ + + + + +L+ED ++ F E V
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAV 63
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVAC 1443
M+ I+H NL +++ C+ +I+++M G+L +L N +N L + ++
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A+EYL + + IH DL N L+ ++ + + DFG+++L+ G I +
Sbjct: 124 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 180
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE + S DV++FG+L+ E T
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 119/260 (45%), Gaps = 28/260 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ + T A+K Q + +F AE +M++++H+ L ++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
+I +YM GSL +L + + + L I + LD+ +A + ++ + + IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 135
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ D + + DFG+A+L++ + + I + APE + G + DV+S
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 1522 FGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKK 1580
FGIL+ E +T R P M EV NL G +
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVI------------------QNLERG---YRMVRPDN 234
Query: 1581 CMSSVMSLALKCSEEIPEER 1600
C + L C +E PE+R
Sbjct: 235 CPEELYQLMRLCWKERPEDR 254
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN 811
+GAG FG V+ VA+K Q + +F AE ++++++H+ LV++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 812 HGFKALILEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+I EYM GSL +L + L I + LD+ +A + ++ + IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 135
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
+ +N+L+ D ++DFG+++L++ + + + APE + G + DV+S
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 931 FGILMIETFT 940
FGIL+ E T
Sbjct: 196 FGILLTEIVT 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 7/204 (3%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ + T A+K Q + +F AE +M++++H+ L ++ + +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
+I +YM GSL +L + + + L I + LD+ +A + ++ + + IH DL
Sbjct: 82 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 137
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ D + + DFG+A+L++ + + I + APE + G + DV+S
Sbjct: 138 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 197
Query: 1522 FGILMMETLTR-RKPTDDMFTGEV 1544
FGIL+ E +T R P M EV
Sbjct: 198 FGILLTEIVTHGRIPYPGMTNPEV 221
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN 811
+GAG FG V+ VA+K Q + +F AE ++++++H+ LV++ + +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 812 HGFKALILEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+I EYM GSL +L + L I + LD+ +A + ++ + IH DL
Sbjct: 82 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 137
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
+ +N+L+ D ++DFG+++L++ + + + APE + G + DV+S
Sbjct: 138 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 197
Query: 931 FGILMIETFT 940
FGIL+ E T
Sbjct: 198 FGILLTEIVT 207
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 7/204 (3%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ + T A+K Q + +F AE +M++++H+ L ++ + +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
+I +YM GSL +L + + + L I + LD+ +A + ++ + + IH DL
Sbjct: 81 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 136
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ D + + DFG+A+L++ + + I + APE + G + DV+S
Sbjct: 137 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 196
Query: 1522 FGILMMETLTR-RKPTDDMFTGEV 1544
FGIL+ E +T R P M EV
Sbjct: 197 FGILLTEIVTHGRIPYPGMTNPEV 220
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN 811
+GAG FG V+ VA+K Q + +F AE ++++++H+ LV++ + +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 812 HGFKALILEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+I EYM GSL +L + L I + LD+ +A + ++ + IH DL
Sbjct: 81 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 136
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
+ +N+L+ D ++DFG+++L++ + + + APE + G + DV+S
Sbjct: 137 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 196
Query: 931 FGILMIETFT 940
FGIL+ E T
Sbjct: 197 FGILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 7/204 (3%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ + T A+K Q + +F AE +M++++H+ L ++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
+I +YM GSL +L + + + L I + LD+ +A + ++ + + IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 135
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ D + + DFG+A+L++ + + I + APE + G + DV+S
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 1522 FGILMMETLTR-RKPTDDMFTGEV 1544
FGIL+ E +T R P M EV
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEV 219
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN 811
+GAG FG V+ VA+K Q + +F AE ++++++H+ LV++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 812 HGFKALILEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+I EYM GSL +L + L I + LD+ +A + ++ + IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 135
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
+ +N+L+ D ++DFG+++L++ + + + APE + G + DV+S
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 931 FGILMIETFT 940
FGIL+ E T
Sbjct: 196 FGILLTEIVT 205
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 85.5 bits (210), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 6/194 (3%)
Query: 752 IGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G +G VY Y + VA+K + ++ F E V++ ++H NLV+++ C+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 811 NHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
++ EYMP G+L +L ++ + L + ++SA+EYL + IH D
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN---FIHRD 155
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+ ++ V ++DFG+S+L+ G+ + APE + S DV+
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVW 215
Query: 930 SFGILMIETFTRKM 943
+FG+L+ E T M
Sbjct: 216 AFGVLLWEIATYGM 229
Score = 77.8 bits (190), Expect = 4e-14, Method: Composition-based stats.
Identities = 55/192 (28%), Positives = 96/192 (50%), Gaps = 8/192 (4%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
LG G + VY + + + + +L+ED ++ F E VM+ I+H NL +++ C+
Sbjct: 40 LGGGQYGEVYVGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 1402 -NPGFKALILQYMPQGSLEKWLYSHNY-LLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
P F ++ +YMP G+L +L N + L + ++ A+EYL + + IH
Sbjct: 99 LEPPF-YIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEK---KNFIHR 154
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDV 1519
DL N L+ ++ V + DFG+++L+ G I + APE + S DV
Sbjct: 155 DLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDV 214
Query: 1520 YSFGILMMETLT 1531
++FG+L+ E T
Sbjct: 215 WAFGVLLWEIAT 226
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 119/260 (45%), Gaps = 28/260 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ + T A+K Q + +F AE +M++++H+ L ++ + +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
+I +YM GSL +L + + + L I + LD+ +A + ++ + + IH DL
Sbjct: 90 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 145
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ D + + DFG+A+L++ + + I + APE + G + DV+S
Sbjct: 146 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 205
Query: 1522 FGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKK 1580
FGIL+ E +T R P M EV NL G +
Sbjct: 206 FGILLTEIVTHGRIPYPGMTNPEVI------------------QNLERG---YRMVRPDN 244
Query: 1581 CMSSVMSLALKCSEEIPEER 1600
C + L C +E PE+R
Sbjct: 245 CPEELYQLMRLCWKERPEDR 264
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN 811
+GAG FG V+ VA+K Q + +F AE ++++++H+ LV++ + +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 812 HGFKALILEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+I EYM GSL +L + L I + LD+ +A + ++ + IH DL
Sbjct: 90 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 145
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
+ +N+L+ D ++DFG+++L++ + + + APE + G + DV+S
Sbjct: 146 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 205
Query: 931 FGILMIETFT 940
FGIL+ E T
Sbjct: 206 FGILLTEIVT 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 119/260 (45%), Gaps = 28/260 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ + T A+K Q + +F AE +M++++H+ L ++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
+I +YM GSL +L + + + L I + LD+ +A + ++ + + IH DL
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 141
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ D + + DFG+A+L++ + + I + APE + G + DV+S
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 201
Query: 1522 FGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKK 1580
FGIL+ E +T R P M EV NL G +
Sbjct: 202 FGILLTEIVTHGRIPYPGMTNPEVI------------------QNLERGYR---MVRPDN 240
Query: 1581 CMSSVMSLALKCSEEIPEER 1600
C + L C +E PE+R
Sbjct: 241 CPEELYQLMRLCWKERPEDR 260
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN 811
+GAG FG V+ VA+K Q + +F AE ++++++H+ LV++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 812 HGFKALILEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+I EYM GSL +L + L I + LD+ +A + ++ + IH DL
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 141
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
+ +N+L+ D ++DFG+++L++ + + + APE + G + DV+S
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 201
Query: 931 FGILMIETFT 940
FGIL+ E T
Sbjct: 202 FGILLTEIVT 211
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 101/190 (53%), Gaps = 21/190 (11%)
Query: 1360 TNAAIKIF-SLQEDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKALILQYMPQGS 1417
T A+K+ S ++ L +E E+M+ I +H+N+ ++ +C+ G +I++Y +G+
Sbjct: 53 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 112
Query: 1418 LEKWL---------YSHNYLLNIEQRLDIMIDVACA------LEYLHQGYSTSIIHCDLK 1462
L ++L YS+N N E++L V+CA +EYL S IH DL
Sbjct: 113 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLA 169
Query: 1463 PSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-LATIGYMAPEYGSEGIVSTSGDVYS 1521
NVL+ +D V + DFG+A+ + +D K+T + +MAPE + I + DV+S
Sbjct: 170 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 229
Query: 1522 FGILMMETLT 1531
FG+L+ E T
Sbjct: 230 FGVLLWEIFT 239
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 41/233 (17%)
Query: 752 IGAGSFGSVYKATLPYGMN---------VAIKVFNLQLDGAIKSFD---AECEVLRRV-R 798
+G G+FG V A G++ VA+K+ L+ D K +E E+++ + +
Sbjct: 28 LGEGAFGQVVLAEA-IGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGK 84
Query: 799 HRNLVKIISSCSNHGFKALILEYMPQGSLEKWL---------YSHKYTLNIQQRL---DI 846
H+N++ ++ +C+ G +I+EY +G+L ++L YS+ + N +++L D+
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 847 M---IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT 903
+ VA +EYL IH DL NVL+ +D V ++DFG+++ + D +T
Sbjct: 145 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 904 MT-LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + I + DV+SFG+L+ E FT +P +E+F
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 254
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 85.1 bits (209), Expect = 3e-16, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 6/194 (3%)
Query: 752 IGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G +G VY+ Y + VA+K + ++ F E V++ ++H NLV+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 811 NHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+I+E+M G+L +L ++ +N L + ++SA+EYL + IH D
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 141
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+ ++ + ++DFG+S+L+ G+ + APE + S DV+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 930 SFGILMIETFTRKM 943
+FG+L+ E T M
Sbjct: 202 AFGVLLWEIATYGM 215
Score = 77.4 bits (189), Expect = 6e-14, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 6/208 (2%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEV 1384
+Y + + + + LG G + VY+ + + + + +L+ED ++ F E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAV 67
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVAC 1443
M+ I+H NL +++ C+ +I+++M G+L +L N +N L + ++
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A+EYL + + IH DL N L+ ++ + + DFG+++L+ G I +
Sbjct: 128 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE + S DV++FG+L+ E T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
Length = 306
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 101/190 (53%), Gaps = 21/190 (11%)
Query: 1360 TNAAIKIF-SLQEDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKALILQYMPQGS 1417
T A+K+ S ++ L +E E+M+ I +H+N+ ++ +C+ G +I++Y +G+
Sbjct: 50 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 109
Query: 1418 LEKWL---------YSHNYLLNIEQRLDIMIDVACA------LEYLHQGYSTSIIHCDLK 1462
L ++L YS+N N E++L V+CA +EYL S IH DL
Sbjct: 110 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLA 166
Query: 1463 PSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-LATIGYMAPEYGSEGIVSTSGDVYS 1521
NVL+ +D V + DFG+A+ + +D K+T + +MAPE + I + DV+S
Sbjct: 167 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 226
Query: 1522 FGILMMETLT 1531
FG+L+ E T
Sbjct: 227 FGVLLWEIFT 236
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 41/233 (17%)
Query: 752 IGAGSFGSVYKATLPYGMN---------VAIKVFNLQLDGAIKSFD---AECEVLRRV-R 798
+G G+FG V A G++ VA+K+ L+ D K +E E+++ + +
Sbjct: 25 LGEGAFGQVVLAEA-IGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGK 81
Query: 799 HRNLVKIISSCSNHGFKALILEYMPQGSLEKWL---------YSHKYTLNIQQRL---DI 846
H+N++ ++ +C+ G +I+EY +G+L ++L YS+ + N +++L D+
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 847 M---IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT 903
+ VA +EYL IH DL NVL+ +D V ++DFG+++ + D +T
Sbjct: 142 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 904 MT-LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + I + DV+SFG+L+ E FT +P +E+F
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 251
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 7/204 (3%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ + T A+K Q + +F AE +M++++H+ L ++ + +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
+I +YM GSL +L + + + L I + LD+ +A + ++ + + IH DL
Sbjct: 85 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 140
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ D + + DFG+A+L++ + + I + APE + G + DV+S
Sbjct: 141 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 200
Query: 1522 FGILMMETLTR-RKPTDDMFTGEV 1544
FGIL+ E +T R P M EV
Sbjct: 201 FGILLTEIVTHGRIPYPGMTNPEV 224
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN 811
+GAG FG V+ VA+K Q + +F AE ++++++H+ LV++ + +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 812 HGFKALILEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+I EYM GSL +L + L I + LD+ +A + ++ + IH DL
Sbjct: 85 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 140
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
+ +N+L+ D ++DFG+++L++ + + + APE + G + DV+S
Sbjct: 141 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 200
Query: 931 FGILMIETFT 940
FGIL+ E T
Sbjct: 201 FGILLTEIVT 210
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 101/190 (53%), Gaps = 21/190 (11%)
Query: 1360 TNAAIKIF-SLQEDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKALILQYMPQGS 1417
T A+K+ S ++ L +E E+M+ I +H+N+ ++ +C+ G +I++Y +G+
Sbjct: 54 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 113
Query: 1418 LEKWL---------YSHNYLLNIEQRLDIMIDVACA------LEYLHQGYSTSIIHCDLK 1462
L ++L YS+N N E++L V+CA +EYL S IH DL
Sbjct: 114 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLA 170
Query: 1463 PSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-LATIGYMAPEYGSEGIVSTSGDVYS 1521
NVL+ +D V + DFG+A+ + +D K+T + +MAPE + I + DV+S
Sbjct: 171 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 230
Query: 1522 FGILMMETLT 1531
FG+L+ E T
Sbjct: 231 FGVLLWEIFT 240
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 41/233 (17%)
Query: 752 IGAGSFGSVYKATLPYGMN---------VAIKVFNLQLDGAIKSFD---AECEVLRRV-R 798
+G G+FG V A G++ VA+K+ L+ D K +E E+++ + +
Sbjct: 29 LGEGAFGQVVLAEA-IGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGK 85
Query: 799 HRNLVKIISSCSNHGFKALILEYMPQGSLEKWL---------YSHKYTLNIQQRL---DI 846
H+N++ ++ +C+ G +I+EY +G+L ++L YS+ + N +++L D+
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 847 M---IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT 903
+ VA +EYL IH DL NVL+ +D V ++DFG+++ + D +T
Sbjct: 146 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 904 MT-LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + I + DV+SFG+L+ E FT +P +E+F
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 255
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 7/204 (3%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ + T A+K Q + +F AE +M++++H+ L ++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
+I +YM GSL +L + + + L I + LD+ +A + ++ + + IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 135
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ D + + DFG+A+L++ + + I + APE + G + DV+S
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 1522 FGILMMETLTR-RKPTDDMFTGEV 1544
FGIL+ E +T R P M EV
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEV 219
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN 811
+GAG FG V+ VA+K Q + +F AE ++++++H+ LV++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 812 HGFKALILEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+I EYM GSL +L + L I + LD+ +A + ++ + IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 135
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
+ +N+L+ D ++DFG+++L++ + + + APE + G + DV+S
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 931 FGILMIETFT 940
FGIL+ E T
Sbjct: 196 FGILLTEIVT 205
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 101/190 (53%), Gaps = 21/190 (11%)
Query: 1360 TNAAIKIF-SLQEDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKALILQYMPQGS 1417
T A+K+ S ++ L +E E+M+ I +H+N+ ++ +C+ G +I++Y +G+
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 1418 LEKWL---------YSHNYLLNIEQRLDIMIDVACA------LEYLHQGYSTSIIHCDLK 1462
L ++L YS+N N E++L V+CA +EYL S IH DL
Sbjct: 121 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLA 177
Query: 1463 PSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-LATIGYMAPEYGSEGIVSTSGDVYS 1521
NVL+ +D V + DFG+A+ + +D K+T + +MAPE + I + DV+S
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
Query: 1522 FGILMMETLT 1531
FG+L+ E T
Sbjct: 238 FGVLLWEIFT 247
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 41/233 (17%)
Query: 752 IGAGSFGSVYKATLPYGMN---------VAIKVFNLQLDGAIKSFD---AECEVLRRV-R 798
+G G+FG V A G++ VA+K+ L+ D K +E E+++ + +
Sbjct: 36 LGEGAFGQVVLAEA-IGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGK 92
Query: 799 HRNLVKIISSCSNHGFKALILEYMPQGSLEKWL---------YSHKYTLNIQQRL---DI 846
H+N++ ++ +C+ G +I+EY +G+L ++L YS+ + N +++L D+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 847 M---IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT 903
+ VA +EYL IH DL NVL+ +D V ++DFG+++ + D +T
Sbjct: 153 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 904 MT-LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + I + DV+SFG+L+ E FT +P +E+F
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 106/203 (52%), Gaps = 20/203 (9%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQED--RALKSFDAECEVMRRIRHRNLAKIVSSC 1400
+G+G F +VYK + + A+K+ ++ + L++F E V+R+ RH N+ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVA----CALEYLHQGYSTSI 1456
+ P A++ Q+ SL Y H +++ + + +ID+A ++YLH + SI
Sbjct: 74 TKPQL-AIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSI 125
Query: 1457 IHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA-TIGYMAPE---YGSEGI 1512
IH DLK +N+ L +D+ +GDFG+A Q L+ +I +MAPE +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
S DVY+FGI++ E +T + P
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 12/199 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSC 809
IG+GSFG+VYK + +VA+K+ N+ +++F E VLR+ RH N++ +
Sbjct: 16 IGSGSFGTVYKGK--WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ A++ ++ SL L+ + + + +DI A ++YLH +IH D
Sbjct: 74 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA-TFGYMAPE---YGSEGIVSTC 925
LK +N+ L +D + DFG++ Q L+ + +MAPE + S
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 926 GDVYSFGILMIETFTRKMP 944
DVY+FGI++ E T ++P
Sbjct: 190 SDVYAFGIVLYELMTGQLP 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 7/204 (3%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ + T A+K Q + +F AE +M++++H+ L ++ + +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
+I +YM GSL +L + + + L I + LD+ +A + ++ + + IH DL
Sbjct: 75 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 130
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ D + + DFG+A+L++ + + I + APE + G + DV+S
Sbjct: 131 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 190
Query: 1522 FGILMMETLTR-RKPTDDMFTGEV 1544
FGIL+ E +T R P M EV
Sbjct: 191 FGILLTEIVTHGRIPYPGMTNPEV 214
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN 811
+GAG FG V+ VA+K Q + +F AE ++++++H+ LV++ + +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 812 HGFKALILEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+I EYM GSL +L + L I + LD+ +A + ++ + IH DL
Sbjct: 75 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 130
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
+ +N+L+ D ++DFG+++L++ + + + APE + G + DV+S
Sbjct: 131 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 190
Query: 931 FGILMIETFT 940
FGIL+ E T
Sbjct: 191 FGILLTEIVT 200
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.7 bits (208), Expect = 4e-16, Method: Composition-based stats.
Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 14/220 (6%)
Query: 726 LSLATWRRISYQELQRLTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAI 784
+SL W E++R TD + + +G G FG VY+ Y + VA+K + +
Sbjct: 1 MSLDKW------EMER-TD-ITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLK-EDTMEV 51
Query: 785 KSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQR 843
+ F E V++ ++H NLV+++ C+ +I E+M G+L +L ++ ++
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 844 LDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT 903
L + ++SA+EYL + IH DL N L+ ++ + ++DFG+S+L+ G+
Sbjct: 112 LYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 168
Query: 904 MTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKM 943
+ APE + S DV++FG+L+ E T M
Sbjct: 169 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 208
Score = 75.1 bits (183), Expect = 3e-13, Method: Composition-based stats.
Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 6/191 (3%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
LG G F VY+ + + + + +L+ED ++ F E VM+ I+H NL +++ C+
Sbjct: 19 LGGGQFGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 1402 NPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
+I ++M G+L +L N ++ L + ++ A+EYL + + IH D
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRD 134
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVY 1520
L N L+ ++ + + DFG+++L+ G I + APE + S DV+
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 1521 SFGILMMETLT 1531
+FG+L+ E T
Sbjct: 195 AFGVLLWEIAT 205
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 84.7 bits (208), Expect = 4e-16, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 752 IGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G +G VY+ Y + VA+K + ++ F E V++ ++H NLV+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 811 NHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+I E+M G+L +L ++ +N L + ++SA+EYL + IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 141
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+ ++ + ++DFG+S+L+ G+ + APE + S DV+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 930 SFGILMIETFTRKM 943
+FG+L+ E T M
Sbjct: 202 AFGVLLWEIATYGM 215
Score = 76.6 bits (187), Expect = 9e-14, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEV 1384
+Y + + + + LG G + VY+ + + + + +L+ED ++ F E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAV 67
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVAC 1443
M+ I+H NL +++ C+ +I ++M G+L +L N +N L + ++
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A+EYL + + IH DL N L+ ++ + + DFG+++L+ G I +
Sbjct: 128 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 184
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE + S DV++FG+L+ E T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 30/268 (11%)
Query: 1340 SNLLGTGIFSSVYKATFADGTNAAIKIFSLQED--RALKSFDAECEVMRRIRHRNLAKIV 1397
S +G+G F +VYK + + A+KI + + ++F E V+R+ RH N+ +
Sbjct: 41 STRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFM 98
Query: 1398 SSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSII 1457
+ A++ Q+ SL K L+ + Q +DI A ++YLH + +II
Sbjct: 99 GYMTKDNL-AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNII 154
Query: 1458 HCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQT-MTLATIGYMAPE---YGSEGIV 1513
H D+K +N+ L + + +GDFG+A + +Q ++ +MAPE
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 1514 STSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEA 1573
S DVYS+GI++ E + TGE+ H D I + G
Sbjct: 215 SFQSDVYSYGIVLYE----------LMTGELPYSHINNR-------DQIIFMVGRGYASP 257
Query: 1574 DIAA-KKKCMSSVMSLALKCSEEIPEER 1600
D++ K C ++ L C +++ EER
Sbjct: 258 DLSKLYKNCPKAMKRLVADCVKKVKEER 285
Score = 83.6 bits (205), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 749 SNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDA---ECEVLRRVRHRNLVKI 805
S IG+GSFG+VYK + +VA+K+ + +D + F A E VLR+ RH N++
Sbjct: 41 STRIGSGSFGTVYKGK--WHGDVAVKILKV-VDPTPEQFQAFRNEVAVLRKTRHVNILLF 97
Query: 806 ISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPV 865
+ + A++ ++ SL K L+ + + Q +DI A ++YLH + +
Sbjct: 98 MGYMTKDNL-AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN---I 153
Query: 866 IHCDLKPSNVLLDDDTVAHLSDFGISKL---LDGEDSVTQTMTLATFGYMAPE---YGSE 919
IH D+K +N+ L + + DFG++ + G V Q + +MAPE
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT--GSVLWMAPEVIRMQDN 211
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
S DVYS+GI++ E T ++P
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 739 LQRLTDGFSESNLIGAGSFGSVYKATL-PYGMN----VAIKVFNLQLDG-AIKSFDAECE 792
L+R+ D +G G FG V P G N VA+K + G I E E
Sbjct: 11 LKRIRD-------LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIE 63
Query: 793 VLRRVRHRNLVKIISSCSNHGFKA--LILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDV 850
+LR + H N+VK C+ G LI+E++P GSL+++L +K +N++Q+L + +
Sbjct: 64 ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQI 123
Query: 851 ASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLAT 908
++YL +H DL NVL++ + + DFG++K + D E + +
Sbjct: 124 CKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP 180
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+ APE + DV+SFG+ + E T
Sbjct: 181 VFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 19/202 (9%)
Query: 1343 LGTGIFSSVYKATF---ADGTNAAIKIFSLQEDRA---LKSFDAECEVMRRIRHRNLAKI 1396
LG G F V + D T + + SL+ + + E E++R + H N+ K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 1397 VSSCSNPGFKA--LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYST 1454
C+ G LI++++P GSL+++L + +N++Q+L + + ++YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SR 133
Query: 1455 SIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTL-----ATIGYMAPEYGS 1509
+H DL NVL++ + +GDFG+ K +++ K+ T+ + + + APE
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTK---AIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 1510 EGIVSTSGDVYSFGILMMETLT 1531
+ + DV+SFG+ + E LT
Sbjct: 191 QSKFYIASDVWSFGVTLHELLT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 739 LQRLTDGFSESNLIGAGSFGSVYKATL-PYGMN----VAIKVFNLQLDG-AIKSFDAECE 792
L+R+ D +G G FG V P G N VA+K + G I E E
Sbjct: 23 LKRIRD-------LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIE 75
Query: 793 VLRRVRHRNLVKIISSCSNHGFKA--LILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDV 850
+LR + H N+VK C+ G LI+E++P GSL+++L +K +N++Q+L + +
Sbjct: 76 ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQI 135
Query: 851 ASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLAT 908
++YL +H DL NVL++ + + DFG++K + D E + +
Sbjct: 136 CKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP 192
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+ APE + DV+SFG+ + E T
Sbjct: 193 VFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 19/202 (9%)
Query: 1343 LGTGIFSSVYKATF---ADGTNAAIKIFSLQEDRA---LKSFDAECEVMRRIRHRNLAKI 1396
LG G F V + D T + + SL+ + + E E++R + H N+ K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 1397 VSSCSNPGFKA--LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYST 1454
C+ G LI++++P GSL+++L + +N++Q+L + + ++YL S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SR 145
Query: 1455 SIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTL-----ATIGYMAPEYGS 1509
+H DL NVL++ + +GDFG+ K +++ K+ T+ + + + APE
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGLTK---AIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 1510 EGIVSTSGDVYSFGILMMETLT 1531
+ + DV+SFG+ + E LT
Sbjct: 203 QSKFYIASDVWSFGVTLHELLT 224
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 6/192 (3%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLDGAIKS-FDAECEVLRRVRHRNLVKIISSC 809
IG G+FG V+ L VA+K L +K+ F E +L++ H N+V++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ +++E + G +L + L ++ L ++ D A+ +EYL IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES---KCCIHRD 238
Query: 870 LKPSNVLLDDDTVAHLSDFGISKL-LDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDV 928
L N L+ + V +SDFG+S+ DG + + + + APE + G S+ DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 929 YSFGILMIETFT 940
+SFGIL+ ETF+
Sbjct: 299 WSFGILLWETFS 310
Score = 77.8 bits (190), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 6/192 (3%)
Query: 1343 LGTGIFSSVYKATF-ADGTNAAIKIFSLQEDRALKS-FDAECEVMRRIRHRNLAKIVSSC 1400
+G G F V+ AD T A+K LK+ F E ++++ H N+ +++ C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
+ ++++ + G +L + L ++ L ++ D A +EYL S IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKL-LDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDV 1519
L N L+ + V + DFG+++ DGV + + + + APE + G S+ DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 1520 YSFGILMMETLT 1531
+SFGIL+ ET +
Sbjct: 299 WSFGILLWETFS 310
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 84.3 bits (207), Expect = 6e-16, Method: Composition-based stats.
Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 34/263 (12%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ AT+ T A+K ++++F AE VM+ ++H L K+ + +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMID----VACALEYLHQGYSTSIIH 1458
+I ++M +GSL +L S +Q L +ID +A + ++ Q + IH
Sbjct: 82 EPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIH 134
Query: 1459 CDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGD 1518
DL+ +N+L+ +V + DFG+A++++ + + I + APE + G + D
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 194
Query: 1519 VYSFGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAA 1577
V+SFGIL+ME +T R P M EV + + E +
Sbjct: 195 VWSFGILLMEIVTYGRIPYPGMSNPEV---------------------IRALERGYRMPR 233
Query: 1578 KKKCMSSVMSLALKCSEEIPEER 1600
+ C + ++ ++C + PEER
Sbjct: 234 PENCPEELYNIMMRCWKNRPEER 256
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/190 (27%), Positives = 100/190 (52%), Gaps = 6/190 (3%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN 811
+GAG FG V+ AT VA+K ++++F AE V++ ++H LVK+ + +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 812 HGFKALILEYMPQGSLEKWLYSHKYTLN-IQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+I E+M +GSL +L S + + + + +D +A + ++ + IH DL
Sbjct: 82 EPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDL 137
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
+ +N+L+ V ++DFG++++++ + + + APE + G + DV+S
Sbjct: 138 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 197
Query: 931 FGILMIETFT 940
FGIL++E T
Sbjct: 198 FGILLMEIVT 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 84.0 bits (206), Expect = 6e-16, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 752 IGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G +G VY+ Y + VA+K + ++ F E V++ ++H NLV+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 811 NHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+I E+M G+L +L ++ +N L + ++SA+EYL + IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 141
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+ ++ + ++DFG+S+L+ G+ + APE + S DV+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 930 SFGILMIETFTRKM 943
+FG+L+ E T M
Sbjct: 202 AFGVLLWEIATYGM 215
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEV 1384
+Y + + + + LG G + VY+ + + + + +L+ED ++ F E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAV 67
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVAC 1443
M+ I+H NL +++ C+ +I ++M G+L +L N +N L + ++
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A+EYL + + IH DL N L+ ++ + + DFG+++L+ G I +
Sbjct: 128 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE + S DV++FG+L+ E T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 84.0 bits (206), Expect = 6e-16, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 752 IGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G +G VY+ Y + VA+K + ++ F E V++ ++H NLV+++ C+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 811 NHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+I E+M G+L +L ++ +N L + ++SA+EYL + IH D
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 149
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+ ++ + ++DFG+S+L+ G+ + APE + S DV+
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 209
Query: 930 SFGILMIETFTRKM 943
+FG+L+ E T M
Sbjct: 210 AFGVLLWEIATYGM 223
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEV 1384
+Y + + + + LG G + VY+ + + + + +L+ED ++ F E V
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAV 75
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVAC 1443
M+ I+H NL +++ C+ +I ++M G+L +L N +N L + ++
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 135
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A+EYL + + IH DL N L+ ++ + + DFG+++L+ G I +
Sbjct: 136 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 192
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE + S DV++FG+L+ E T
Sbjct: 193 APESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 84.0 bits (206), Expect = 6e-16, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 752 IGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G +G VY+ Y + VA+K + ++ F E V++ ++H NLV+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 811 NHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+I E+M G+L +L ++ +N L + ++SA+EYL + IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 141
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+ ++ + ++DFG+S+L+ G+ + APE + S DV+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 930 SFGILMIETFTRKM 943
+FG+L+ E T M
Sbjct: 202 AFGVLLWEIATYGM 215
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEV 1384
+Y + + + + LG G + VY+ + + + + +L+ED ++ F E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAV 67
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVAC 1443
M+ I+H NL +++ C+ +I ++M G+L +L N +N L + ++
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A+EYL + + IH DL N L+ ++ + + DFG+++L+ G I +
Sbjct: 128 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE + S DV++FG+L+ E T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 84.0 bits (206), Expect = 6e-16, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 752 IGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G +G VY+ Y + VA+K + ++ F E V++ ++H NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 811 NHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+I E+M G+L +L ++ +N L + ++SA+EYL + IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+ ++ + ++DFG+S+L+ G+ + APE + S DV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 930 SFGILMIETFTRKM 943
+FG+L+ E T M
Sbjct: 197 AFGVLLWEIATYGM 210
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEV 1384
+Y + + + + LG G + VY+ + + + + +L+ED ++ F E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVAC 1443
M+ I+H NL +++ C+ +I ++M G+L +L N +N L + ++
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A+EYL + + IH DL N L+ ++ + + DFG+++L+ G I +
Sbjct: 123 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE + S DV++FG+L+ E T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 84.0 bits (206), Expect = 6e-16, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 752 IGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G +G VY+ Y + VA+K + ++ F E V++ ++H NLV+++ C+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 811 NHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+I E+M G+L +L ++ +N L + ++SA+EYL + IH D
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 140
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+ ++ + ++DFG+S+L+ G+ + APE + S DV+
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 200
Query: 930 SFGILMIETFTRKM 943
+FG+L+ E T M
Sbjct: 201 AFGVLLWEIATYGM 214
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEV 1384
+Y + + + + LG G + VY+ + + + + +L+ED ++ F E V
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAV 66
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVAC 1443
M+ I+H NL +++ C+ +I ++M G+L +L N +N L + ++
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 126
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A+EYL + + IH DL N L+ ++ + + DFG+++L+ G I +
Sbjct: 127 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 183
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE + S DV++FG+L+ E T
Sbjct: 184 APESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 84.0 bits (206), Expect = 6e-16, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 752 IGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G +G VY+ Y + VA+K + ++ F E V++ ++H NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 811 NHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+I E+M G+L +L ++ +N L + ++SA+EYL + IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+ ++ + ++DFG+S+L+ G+ + APE + S DV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 930 SFGILMIETFTRKM 943
+FG+L+ E T M
Sbjct: 197 AFGVLLWEIATYGM 210
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEV 1384
+Y + + + + LG G + VY+ + + + + +L+ED ++ F E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVAC 1443
M+ I+H NL +++ C+ +I ++M G+L +L N +N L + ++
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A+EYL + + IH DL N L+ ++ + + DFG+++L+ G I +
Sbjct: 123 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE + S DV++FG+L+ E T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 84.0 bits (206), Expect = 6e-16, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 752 IGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G +G VY+ Y + VA+K + ++ F E V++ ++H NLV+++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 811 NHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+I E+M G+L +L ++ +N L + ++SA+EYL + IH D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 138
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+ ++ + ++DFG+S+L+ G+ + APE + S DV+
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 930 SFGILMIETFTRKM 943
+FG+L+ E T M
Sbjct: 199 AFGVLLWEIATYGM 212
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEV 1384
+Y + + + + LG G + VY+ + + + + +L+ED ++ F E V
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAV 64
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVAC 1443
M+ I+H NL +++ C+ +I ++M G+L +L N +N L + ++
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A+EYL + + IH DL N L+ ++ + + DFG+++L+ G I +
Sbjct: 125 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 181
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE + S DV++FG+L+ E T
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 84.0 bits (206), Expect = 6e-16, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 752 IGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G +G VY+ Y + VA+K + ++ F E V++ ++H NLV+++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 811 NHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+I E+M G+L +L ++ +N L + ++SA+EYL + IH D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 138
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+ ++ + ++DFG+S+L+ G+ + APE + S DV+
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 930 SFGILMIETFTRKM 943
+FG+L+ E T M
Sbjct: 199 AFGVLLWEIATYGM 212
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEV 1384
+Y + + + + LG G + VY+ + + + + +L+ED ++ F E V
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAV 64
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVAC 1443
M+ I+H NL +++ C+ +I ++M G+L +L N +N L + ++
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A+EYL + + IH DL N L+ ++ + + DFG+++L+ G I +
Sbjct: 125 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 181
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE + S DV++FG+L+ E T
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In
Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.0 bits (206), Expect = 7e-16, Method: Composition-based stats.
Identities = 57/204 (27%), Positives = 104/204 (50%), Gaps = 7/204 (3%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G V+ + T A+K Q + +F AE +M++++H+ L ++ + +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
+I +YM GSL +L + + + L I + LD+ +A + ++ + + IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 135
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ D + + DFG+A+L++ + + I + APE + G + DV+S
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 1522 FGILMMETLTR-RKPTDDMFTGEV 1544
FGIL+ E +T R P M EV
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEV 219
Score = 78.2 bits (191), Expect = 3e-14, Method: Composition-based stats.
Identities = 55/203 (27%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN 811
+GAG G V+ VA+K Q + +F AE ++++++H+ LV++ + +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 812 HGFKALILEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+I EYM GSL +L + L I + LD+ +A + ++ + IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 135
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
+ +N+L+ D ++DFG+++L++ + + + APE + G + DV+S
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 931 FGILMIETFTR-KMPTDEMFTGE 952
FGIL+ E T ++P M E
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPE 218
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 105/204 (51%), Gaps = 7/204 (3%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ + T A+K Q + +F AE +M++++H+ L ++ + +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
+I +YM GSL +L + + + L I + LD+ +A + ++ + + IH +L
Sbjct: 76 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRNL 131
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +N+L+ D + + DFG+A+L++ + + I + APE + G + DV+S
Sbjct: 132 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 191
Query: 1522 FGILMMETLTR-RKPTDDMFTGEV 1544
FGIL+ E +T R P M EV
Sbjct: 192 FGILLTEIVTHGRIPYPGMTNPEV 215
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN 811
+GAG FG V+ VA+K Q + +F AE ++++++H+ LV++ + +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 812 HGFKALILEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+I EYM GSL +L + L I + LD+ +A + ++ + IH +L
Sbjct: 76 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRNL 131
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
+ +N+L+ D ++DFG+++L++ + + + APE + G + DV+S
Sbjct: 132 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 191
Query: 931 FGILMIETFT 940
FGIL+ E T
Sbjct: 192 FGILLTEIVT 201
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 83.6 bits (205), Expect = 8e-16, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 100/190 (52%), Gaps = 21/190 (11%)
Query: 1360 TNAAIKIF-SLQEDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKALILQYMPQGS 1417
T A+K+ S ++ L +E E+M+ I +H+N+ ++ +C+ G +I++Y +G+
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 1418 LEKWL---------YSHNYLLNIEQRLDIMIDVACA------LEYLHQGYSTSIIHCDLK 1462
L ++L Y +N N E++L V+CA +EYL S IH DL
Sbjct: 121 LREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLA 177
Query: 1463 PSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-LATIGYMAPEYGSEGIVSTSGDVYS 1521
NVL+ +D V + DFG+A+ + +D K+T + +MAPE + I + DV+S
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
Query: 1522 FGILMMETLT 1531
FG+L+ E T
Sbjct: 238 FGVLLWEIFT 247
Score = 74.7 bits (182), Expect = 4e-13, Method: Composition-based stats.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 41/233 (17%)
Query: 752 IGAGSFGSVYKATLPYGMN---------VAIKVFNLQLDGAIKSFD---AECEVLRRV-R 798
+G G+FG V A G++ VA+K+ L+ D K +E E+++ + +
Sbjct: 36 LGEGAFGQVVLAE-AIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGK 92
Query: 799 HRNLVKIISSCSNHGFKALILEYMPQGSLEKWL---------YSHKYTLNIQQRL---DI 846
H+N++ ++ +C+ G +I+EY +G+L ++L Y + + N +++L D+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 847 M---IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT 903
+ VA +EYL IH DL NVL+ +D V ++DFG+++ + D +T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 904 MT-LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + I + DV+SFG+L+ E FT +P +E+F
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 83.6 bits (205), Expect = 8e-16, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 6/194 (3%)
Query: 752 IGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G +G VY+ Y + VA+K + ++ F E V++ ++H NLV+++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 811 NHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+I+E+M G+L +L ++ ++ L + ++SA+EYL + IH D
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 134
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+ ++ + ++DFG+S+L+ G+ + APE + S DV+
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 930 SFGILMIETFTRKM 943
+FG+L+ E T M
Sbjct: 195 AFGVLLWEIATYGM 208
Score = 75.1 bits (183), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 6/191 (3%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
LG G + VY+ + + + + +L+ED ++ F E VM+ I+H NL +++ C+
Sbjct: 19 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 1402 NPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
+I+++M G+L +L N ++ L + ++ A+EYL + + IH D
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRD 134
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVY 1520
L N L+ ++ + + DFG+++L+ G I + APE + S DV+
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 1521 SFGILMMETLT 1531
+FG+L+ E T
Sbjct: 195 AFGVLLWEIAT 205
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 6/192 (3%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLDGAIKS-FDAECEVLRRVRHRNLVKIISSC 809
IG G+FG V+ L VA+K L +K+ F E +L++ H N+V++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ +++E + G +L + L ++ L ++ D A+ +EYL IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES---KCCIHRD 238
Query: 870 LKPSNVLLDDDTVAHLSDFGISKL-LDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDV 928
L N L+ + V +SDFG+S+ DG + + + + APE + G S+ DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 929 YSFGILMIETFT 940
+SFGIL+ ETF+
Sbjct: 299 WSFGILLWETFS 310
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 6/192 (3%)
Query: 1343 LGTGIFSSVYKATF-ADGTNAAIKIFSLQEDRALKS-FDAECEVMRRIRHRNLAKIVSSC 1400
+G G F V+ AD T A+K LK+ F E ++++ H N+ +++ C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
+ ++++ + G +L + L ++ L ++ D A +EYL S IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKL-LDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDV 1519
L N L+ + V + DFG+++ DGV + + + + APE + G S+ DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 1520 YSFGILMMETLT 1531
+SFGIL+ ET +
Sbjct: 299 WSFGILLWETFS 310
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 83.2 bits (204), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 752 IGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G +G VY+ Y + VA+K + ++ F E V++ ++H NLV+++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 811 NHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+I E+M G+L +L ++ +N L + ++SA+EYL + IH D
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 137
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+ ++ + ++DFG+S+L+ G+ + APE + S DV+
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVW 197
Query: 930 SFGILMIETFTRKM 943
+FG+L+ E T M
Sbjct: 198 AFGVLLWEIATYGM 211
Score = 75.5 bits (184), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEV 1384
+Y + + + + LG G + VY+ + + + + +L+ED ++ F E V
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAV 63
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVAC 1443
M+ I+H NL +++ C+ +I ++M G+L +L N +N L + ++
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A+EYL + + IH DL N L+ ++ + + DFG+++L+ G I +
Sbjct: 124 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT 180
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE + S DV++FG+L+ E T
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 83.2 bits (204), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 752 IGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G +G VY+ Y + VA+K + ++ F E V++ ++H NLV+++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 811 NHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+I E+M G+L +L ++ +N L + ++SA+EYL + IH D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 138
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+ ++ + ++DFG+S+L+ G+ + APE + S DV+
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 930 SFGILMIETFTRKM 943
+FG+L+ E T M
Sbjct: 199 AFGVLLWEIATYGM 212
Score = 75.5 bits (184), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEV 1384
+Y + + + + LG G + VY+ + + + + +L+ED ++ F E V
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAV 64
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVAC 1443
M+ I+H NL +++ C+ +I ++M G+L +L N +N L + ++
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A+EYL + + IH DL N L+ ++ + + DFG+++L+ G I +
Sbjct: 125 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT 181
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE + S DV++FG+L+ E T
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 100/190 (52%), Gaps = 21/190 (11%)
Query: 1360 TNAAIKIF-SLQEDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKALILQYMPQGS 1417
T A+K+ S ++ L +E E+M+ I +H+N+ ++ +C+ G +I++Y +G+
Sbjct: 46 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 105
Query: 1418 LEKWL---------YSHNYLLNIEQRLDIMIDVACA------LEYLHQGYSTSIIHCDLK 1462
L ++L Y +N N E++L V+CA +EYL S IH DL
Sbjct: 106 LREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLA 162
Query: 1463 PSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-LATIGYMAPEYGSEGIVSTSGDVYS 1521
NVL+ +D V + DFG+A+ + +D K+T + +MAPE + I + DV+S
Sbjct: 163 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 222
Query: 1522 FGILMMETLT 1531
FG+L+ E T
Sbjct: 223 FGVLLWEIFT 232
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 41/233 (17%)
Query: 752 IGAGSFGSVYKATLPYGMN---------VAIKVFNLQLDGAIKSFD---AECEVLRRV-R 798
+G G+FG V A G++ VA+K+ L+ D K +E E+++ + +
Sbjct: 21 LGEGAFGQVVLAEA-IGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGK 77
Query: 799 HRNLVKIISSCSNHGFKALILEYMPQGSLEKWL---------YSHKYTLNIQQRL---DI 846
H+N++ ++ +C+ G +I+EY +G+L ++L Y + + N +++L D+
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 847 M---IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT 903
+ VA +EYL IH DL NVL+ +D V ++DFG+++ + D +T
Sbjct: 138 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 904 MT-LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + I + DV+SFG+L+ E FT +P +E+F
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 247
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 16/232 (6%)
Query: 715 NKNLPILENDSLSLATWRRISYQELQRLTDGFSESNLIGAGSFGSVYKATLP-YGMNVAI 773
+N P + S + W E++R TD + + +G G +G VY+ Y + VA+
Sbjct: 196 KRNKPTVYGVSPNYDKW------EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAV 247
Query: 774 KVFNLQLDG-AIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLY 832
K L+ D ++ F E V++ ++H NLV+++ C+ +I E+M G+L +L
Sbjct: 248 KT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR 305
Query: 833 S-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGIS 891
++ +N L + ++SA+EYL + IH +L N L+ ++ + ++DFG+S
Sbjct: 306 ECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLS 362
Query: 892 KLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKM 943
+L+ G+ + APE + S DV++FG+L+ E T M
Sbjct: 363 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 414
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEV 1384
+Y + + + + LG G + VY+ + + + + +L+ED ++ F E V
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAV 266
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVAC 1443
M+ I+H NL +++ C+ +I ++M G+L +L N +N L + ++
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 326
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A+EYL + + IH +L N L+ ++ + + DFG+++L+ G I +
Sbjct: 327 AMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 383
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE + S DV++FG+L+ E T
Sbjct: 384 APESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 34/263 (12%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ AT+ T A+K ++++F AE VM+ ++H L K+ + +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMID----VACALEYLHQGYSTSIIH 1458
+I ++M +GSL +L S +Q L +ID +A + ++ Q + IH
Sbjct: 255 EPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIH 307
Query: 1459 CDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGD 1518
DL+ +N+L+ +V + DFG+A++++ + + I + APE + G + D
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 367
Query: 1519 VYSFGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAA 1577
V+SFGIL+ME +T R P M EV + + E +
Sbjct: 368 VWSFGILLMEIVTYGRIPYPGMSNPEV---------------------IRALERGYRMPR 406
Query: 1578 KKKCMSSVMSLALKCSEEIPEER 1600
+ C + ++ ++C + PEER
Sbjct: 407 PENCPEELYNIMMRCWKNRPEER 429
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 100/190 (52%), Gaps = 6/190 (3%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN 811
+GAG FG V+ AT VA+K ++++F AE V++ ++H LVK+ + +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 812 HGFKALILEYMPQGSLEKWLYSHKYTLN-IQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+I E+M +GSL +L S + + + + +D +A + ++ + IH DL
Sbjct: 255 EPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDL 310
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
+ +N+L+ V ++DFG++++++ + + + APE + G + DV+S
Sbjct: 311 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 370
Query: 931 FGILMIETFT 940
FGIL++E T
Sbjct: 371 FGILLMEIVT 380
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 83.2 bits (204), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 6/194 (3%)
Query: 752 IGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G +G VY+ Y + VA+K + ++ F E V++ ++H NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 811 NHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+I+E+M G+L +L ++ ++ L + ++SA+EYL + IH D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+ ++ + ++DFG+S+L+ G+ + APE + S DV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 930 SFGILMIETFTRKM 943
+FG+L+ E T M
Sbjct: 197 AFGVLLWEIATYGM 210
Score = 75.5 bits (184), Expect = 3e-13, Method: Composition-based stats.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 6/208 (2%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEV 1384
+Y + + + + LG G + VY+ + + + + +L+ED ++ F E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVAC 1443
M+ I+H NL +++ C+ +I+++M G+L +L N ++ L + ++
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A+EYL + + IH DL N L+ ++ + + DFG+++L+ G I +
Sbjct: 123 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE + S DV++FG+L+ E T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 83.2 bits (204), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 6/194 (3%)
Query: 752 IGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G +G VY+ Y + VA+K + ++ F E V++ ++H NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 811 NHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+I+E+M G+L +L ++ ++ L + ++SA+EYL + IH D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+ ++ + ++DFG+S+L+ G+ + APE + S DV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 930 SFGILMIETFTRKM 943
+FG+L+ E T M
Sbjct: 197 AFGVLLWEIATYGM 210
Score = 75.5 bits (184), Expect = 3e-13, Method: Composition-based stats.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 6/208 (2%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEV 1384
+Y + + + + LG G + VY+ + + + + +L+ED ++ F E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVAC 1443
M+ I+H NL +++ C+ +I+++M G+L +L N ++ L + ++
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A+EYL + + IH DL N L+ ++ + + DFG+++L+ G I +
Sbjct: 123 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE + S DV++FG+L+ E T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 16/232 (6%)
Query: 715 NKNLPILENDSLSLATWRRISYQELQRLTDGFSESNLIGAGSFGSVYKATLP-YGMNVAI 773
+N P + S + W E++R TD + + +G G +G VY+ Y + VA+
Sbjct: 238 KRNKPTVYGVSPNYDKW------EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAV 289
Query: 774 KVFNLQLDG-AIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLY 832
K L+ D ++ F E V++ ++H NLV+++ C+ +I E+M G+L +L
Sbjct: 290 KT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR 347
Query: 833 S-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGIS 891
++ +N L + ++SA+EYL + IH +L N L+ ++ + ++DFG+S
Sbjct: 348 ECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLS 404
Query: 892 KLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKM 943
+L+ G+ + APE + S DV++FG+L+ E T M
Sbjct: 405 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 456
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEV 1384
+Y + + + + LG G + VY+ + + + + +L+ED ++ F E V
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAV 308
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVAC 1443
M+ I+H NL +++ C+ +I ++M G+L +L N +N L + ++
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 368
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A+EYL + + IH +L N L+ ++ + + DFG+++L+ G I +
Sbjct: 369 AMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 425
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE + S DV++FG+L+ E T
Sbjct: 426 APESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 100/190 (52%), Gaps = 21/190 (11%)
Query: 1360 TNAAIKIF-SLQEDRALKSFDAECEVMRRI-RHRNLAKIVSSCSNPGFKALILQYMPQGS 1417
T A+K+ S ++ L +E E+M+ I +H+N+ ++ +C+ G +I++Y +G+
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 1418 LEKWL---------YSHNYLLNIEQRLDIMIDVACA------LEYLHQGYSTSIIHCDLK 1462
L ++L +S N N E++L V+CA +EYL S IH DL
Sbjct: 121 LREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLA 177
Query: 1463 PSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-LATIGYMAPEYGSEGIVSTSGDVYS 1521
NVL+ +D V + DFG+A+ + +D K+T + +MAPE + I + DV+S
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
Query: 1522 FGILMMETLT 1531
FG+L+ E T
Sbjct: 238 FGVLLWEIFT 247
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 41/233 (17%)
Query: 752 IGAGSFGSVYKATLPYGMN---------VAIKVFNLQLDGAIKSFD---AECEVLRRV-R 798
+G G+FG V A G++ VA+K+ L+ D K +E E+++ + +
Sbjct: 36 LGEGAFGQVVLAEA-IGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGK 92
Query: 799 HRNLVKIISSCSNHGFKALILEYMPQGSLEKWL---------YSHKYTLNIQQRL---DI 846
H+N++ ++ +C+ G +I+EY +G+L ++L +S + N +++L D+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 847 M---IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT 903
+ VA +EYL IH DL NVL+ +D V ++DFG+++ + D +T
Sbjct: 153 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 904 MT-LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + I + DV+SFG+L+ E FT +P +E+F
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 6/211 (2%)
Query: 751 LIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSC 809
++G G++G VY L + +AIK + + E + + ++H+N+V+ + S
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
S +GF + +E +P GSL L S L ++ I LE L + H ++H D
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQT-IGFYTKQILEGLKYLHDNQIVHRD 133
Query: 870 LKPSNVLLDDDT-VAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGI--VSTCG 926
+K NVL++ + V +SDFG SK L G + T+T T T YMAPE +G
Sbjct: 134 IKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-GTLQYMAPEIIDKGPRGYGKAA 192
Query: 927 DVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
D++S G +IE T K P E+ + ++ K
Sbjct: 193 DIWSLGCTIIEMATGKPPFYELGEPQAAMFK 223
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 29/274 (10%)
Query: 1342 LLGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSC 1400
+LG G + VY ++ AIK ++ R + E + + ++H+N+ + + S
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSH-NYLLNIEQRLDIMI-DVACALEYLHQGYSTSIIH 1458
S GF + ++ +P GSL L S L + EQ + + L+YLH I+H
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVH 131
Query: 1459 CDLKPSNVLLDD-DMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI--VST 1515
D+K NVL++ V + DFG +K L G++ +T T T+ YMAPE +G
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-GTLQYMAPEIIDKGPRGYGK 190
Query: 1516 SGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADI 1575
+ D++S G ++E T + P + E P A + + E +
Sbjct: 191 AADIWSLGCTIIEMATGKPP-------------FYELGEPQAAMFKVGMFKVHPEIPESM 237
Query: 1576 AAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609
+A+ K + LKC E P++R D L +
Sbjct: 238 SAEAK------AFILKCFEPDPDKRACANDLLVD 265
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 6/211 (2%)
Query: 751 LIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSC 809
++G G++G VY L + +AIK + + E + + ++H+N+V+ + S
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
S +GF + +E +P GSL L S L ++ I LE L + H ++H D
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQT-IGFYTKQILEGLKYLHDNQIVHRD 147
Query: 870 LKPSNVLLDDDT-VAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGI--VSTCG 926
+K NVL++ + V +SDFG SK L G + T+T T T YMAPE +G
Sbjct: 148 IKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-GTLQYMAPEIIDKGPRGYGKAA 206
Query: 927 DVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
D++S G +IE T K P E+ + ++ K
Sbjct: 207 DIWSLGCTIIEMATGKPPFYELGEPQAAMFK 237
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 29/274 (10%)
Query: 1342 LLGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSC 1400
+LG G + VY ++ AIK ++ R + E + + ++H+N+ + + S
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSH-NYLLNIEQRLDIMI-DVACALEYLHQGYSTSIIH 1458
S GF + ++ +P GSL L S L + EQ + + L+YLH I+H
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVH 145
Query: 1459 CDLKPSNVLLDD-DMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI--VST 1515
D+K NVL++ V + DFG +K L G++ +T T T+ YMAPE +G
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-GTLQYMAPEIIDKGPRGYGK 204
Query: 1516 SGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADI 1575
+ D++S G ++E T + P + E P A + + E +
Sbjct: 205 AADIWSLGCTIIEMATGKPP-------------FYELGEPQAAMFKVGMFKVHPEIPESM 251
Query: 1576 AAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN 1609
+A+ K + LKC E P++R D L +
Sbjct: 252 SAEAK------AFILKCFEPDPDKRACANDLLVD 279
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 82.4 bits (202), Expect = 2e-15, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 110/220 (50%), Gaps = 14/220 (6%)
Query: 726 LSLATWRRISYQELQRLTDGFSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAI 784
+SL W E++R TD + + +G G +G VY+ Y + VA+K + +
Sbjct: 1 MSLDKW------EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEV 51
Query: 785 KSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQR 843
+ F E V++ ++H NLV+++ C+ +I E+M G+L +L ++ ++
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 844 LDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT 903
L + ++SA+EYL + IH DL N L+ ++ + ++DFG+S+L+ G+
Sbjct: 112 LYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHA 168
Query: 904 MTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKM 943
+ APE + S DV++FG+L+ E T M
Sbjct: 169 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 208
Score = 73.2 bits (178), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 6/191 (3%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
LG G + VY+ + + + + +L+ED ++ F E VM+ I+H NL +++ C+
Sbjct: 19 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 1402 NPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
+I ++M G+L +L N ++ L + ++ A+EYL + + IH D
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRD 134
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVY 1520
L N L+ ++ + + DFG+++L+ G I + APE + S DV+
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 1521 SFGILMMETLT 1531
+FG+L+ E T
Sbjct: 195 AFGVLLWEIAT 205
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 120/298 (40%), Gaps = 45/298 (15%)
Query: 1343 LGTGIFSSVYKATF------ADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKI 1396
LG G F V+ A D A+K D A K F E E++ ++H ++ K
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 1397 VSSCSNPGFKALILQYMPQGSLEKWLYSH--NYLLNIE----------QRLDIMIDVACA 1444
C ++ +YM G L K+L +H + +L E Q L I +A
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK-QTMTLATIGYM 1503
+ YL S +H DL N L+ ++++ +GDFG+++ + D + T+ I +M
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
PE +T DV+S G+++ E T K + W + S + + +
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGK------------QPWYQLSNNEVIECITQ 245
Query: 1564 ANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDA---LANLKKIKTKFL 1618
+L + C V L L C + P R N+K L NL K +L
Sbjct: 246 GRVLQ--------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPVYL 295
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
+G G+FG V+ A Y + VA+K D A K F E E+L ++H ++VK
Sbjct: 21 LGEGAFGKVFLAEC-YNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYSH------------KYTLNIQQRLDIMIDVAS 852
C ++ EYM G L K+L +H L Q L I +A+
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV-TQTMTLATFGY 911
+ YL H +H DL N L+ ++ + + DFG+S+ + D T+ +
Sbjct: 140 GMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFT 940
M PE +T DV+S G+++ E FT
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 82.0 bits (201), Expect = 3e-15, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 752 IGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G +G VY+ Y + VA+K + ++ F E V++ ++H NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 811 NHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+I E+M G+L +L ++ ++ L + ++SA+EYL + IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+ ++ + ++DFG+S+L+ G+ + APE + S DV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 930 SFGILMIETFTRKM 943
+FG+L+ E T M
Sbjct: 197 AFGVLLWEIATYGM 210
Score = 74.3 bits (181), Expect = 6e-13, Method: Composition-based stats.
Identities = 52/208 (25%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEV 1384
+Y + + + + LG G + VY+ + + + + +L+ED ++ F E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVAC 1443
M+ I+H NL +++ C+ +I ++M G+L +L N ++ L + ++
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A+EYL + + IH DL N L+ ++ + + DFG+++L+ G I +
Sbjct: 123 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE + S DV++FG+L+ E T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 82.0 bits (201), Expect = 3e-15, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 752 IGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G +G VY+ Y + VA+K + ++ F E V++ ++H NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 811 NHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+I E+M G+L +L ++ ++ L + ++SA+EYL + IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+ ++ + ++DFG+S+L+ G+ + APE + S DV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 930 SFGILMIETFTRKM 943
+FG+L+ E T M
Sbjct: 197 AFGVLLWEIATYGM 210
Score = 74.3 bits (181), Expect = 6e-13, Method: Composition-based stats.
Identities = 52/208 (25%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEV 1384
+Y + + + + LG G + VY+ + + + + +L+ED ++ F E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVAC 1443
M+ I+H NL +++ C+ +I ++M G+L +L N ++ L + ++
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A+EYL + + IH DL N L+ ++ + + DFG+++L+ G I +
Sbjct: 123 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE + S DV++FG+L+ E T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 82.0 bits (201), Expect = 3e-15, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 752 IGAGSFGSVYKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G +G VY+ Y + VA+K + ++ F E V++ ++H NLV+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 811 NHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+I E+M G+L +L ++ ++ L + ++SA+EYL + IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 141
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVY 929
L N L+ ++ + ++DFG+S+L+ G+ + APE + S DV+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 930 SFGILMIETFTRKM 943
+FG+L+ E T M
Sbjct: 202 AFGVLLWEIATYGM 215
Score = 74.3 bits (181), Expect = 6e-13, Method: Composition-based stats.
Identities = 52/208 (25%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEV 1384
+Y + + + + LG G + VY+ + + + + +L+ED ++ F E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAV 67
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVAC 1443
M+ I+H NL +++ C+ +I ++M G+L +L N ++ L + ++
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 127
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A+EYL + + IH DL N L+ ++ + + DFG+++L+ G I +
Sbjct: 128 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE + S DV++FG+L+ E T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine
Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 21/223 (9%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATFA--DGTNAAIKIFSLQED----RALKSFDAE 1381
+++ + F+ +LG G F SV +A DG+ + + L+ D ++ F E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 1382 CEVMRRIRHRNLAKIVSSCSNPGFKA------LILQYMPQGSLEKWLYSHN-----YLLN 1430
M+ H ++AK+V K +IL +M G L +L + + L
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLP 135
Query: 1431 IEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
++ + M+D+AC +EYL S + IH DL N +L +DM + DFG+++ + D
Sbjct: 136 LQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY 192
Query: 1491 MKQ-TMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTR 1532
+Q + + ++A E ++ + + DV++FG+ M E +TR
Sbjct: 193 YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTR 235
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG----MNVAIKVFNLQLDGA--IKSFDAECEVLRRVRH 799
F+ ++G G FGSV +A L + VA+K+ + + I+ F E ++ H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 800 RNLVKIISSCSNHGFKA------LILEYMPQGSLEKWLYSHK-----YTLNIQQRLDIMI 848
++ K++ K +IL +M G L +L + + + L +Q + M+
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 849 DVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQ-TMTLA 907
D+A +EYL + IH DL N +L +D ++DFG+S+ + D Q +
Sbjct: 145 DIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 908 TFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTR 941
++A E ++ + + DV++FG+ M E TR
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTR 235
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 115/232 (49%), Gaps = 16/232 (6%)
Query: 715 NKNLPILENDSLSLATWRRISYQELQRLTDGFSESNLIGAGSFGSVYKATLP-YGMNVAI 773
+N P + S + W E++R TD + + +G G +G VY+ Y + VA+
Sbjct: 199 KRNKPTIYGVSPNYDKW------EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAV 250
Query: 774 KVFNLQLDG-AIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLY 832
K L+ D ++ F E V++ ++H NLV+++ C+ +I E+M G+L +L
Sbjct: 251 KT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR 308
Query: 833 S-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGIS 891
++ ++ L + ++SA+EYL + IH +L N L+ ++ + ++DFG+S
Sbjct: 309 ECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLS 365
Query: 892 KLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKM 943
+L+ G+ + APE + S DV++FG+L+ E T M
Sbjct: 366 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 417
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 100/207 (48%), Gaps = 6/207 (2%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-ALKSFDAECEVM 1385
Y + + + + LG G + VY+ + + + + +L+ED ++ F E VM
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAVM 270
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-LNIEQRLDIMIDVACA 1444
+ I+H NL +++ C+ +I ++M G+L +L N ++ L + ++ A
Sbjct: 271 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 330
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
+EYL + + IH +L N L+ ++ + + DFG+++L+ G I + A
Sbjct: 331 MEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 387
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE + S DV++FG+L+ E T
Sbjct: 388 PESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 116/231 (50%), Gaps = 27/231 (11%)
Query: 737 QELQ-RLTDGFSESNLI------GAGSFGSVYKATLPY--GMNVAIKVFNLQLDGA---- 783
+ELQ +L D + NL+ G G FGSV + L G ++ + V ++LD +
Sbjct: 20 EELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQRE 79
Query: 784 IKSFDAECEVLRRVRHRNLVKIISSC---SNHGFKA--LILEYMPQGSLEKWL-YSHKYT 837
I+ F +E ++ H N+++++ C S+ G +IL +M G L +L YS T
Sbjct: 80 IEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLET 139
Query: 838 ----LNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKL 893
+ +Q L M+D+A +EYL + + +H DL N +L DD ++DFG+SK
Sbjct: 140 GPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKK 196
Query: 894 LDGEDSVTQ-TMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKM 943
+ D Q + ++A E ++ + ++ DV++FG+ M E TR M
Sbjct: 197 IYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGM 247
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 32/215 (14%)
Query: 1341 NLLGTGIFSSVYKATFA--DGTNAAIKIFSLQED----RALKSFDAECEVMRRIRHRNLA 1394
+LG G F SV + DGT+ + + +++ D R ++ F +E M+ H N+
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 1395 KIVSSC---SNPGFKA--LILQYMPQGSLEKWLYSHNYLLN-----------IEQRLDIM 1438
+++ C S+ G +IL +M G L H YLL ++ L M
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDL------HTYLLYSRLETGPKHIPLQTLLKFM 153
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQ-TMTL 1497
+D+A +EYL + + +H DL N +L DDM + DFG++K + D +Q +
Sbjct: 154 VDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAK 210
Query: 1498 ATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTR 1532
+ ++A E ++ + ++ DV++FG+ M E TR
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR 245
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 749 SNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLD----GAIKSFDAECEVLRRVRHRNLVK 804
+IG G FG VY+A G VA+K D I++ E ++ ++H N++
Sbjct: 12 EEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
+ C L++E+ G L + L + +I ++ + +A + YLH P
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLHDEAIVP 128
Query: 865 VIHCDLKPSNVLLDD--------DTVAHLSDFGISKLLDGEDSVTQTMTLA-TFGYMAPE 915
+IH DLK SN+L+ + + ++DFG+++ E T M+ A + +MAPE
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKMSAAGAYAWMAPE 184
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ S DV+S+G+L+ E T ++P
Sbjct: 185 VIRASMFSKGSDVWSYGVLLWELLTGEVP 213
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 25/226 (11%)
Query: 1322 LRRISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQED----RALKS 1377
L I + EL L ++G G F VY+A F G A+K D + +++
Sbjct: 1 LLEIDFAELTL-------EEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIEN 52
Query: 1378 FDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDI 1437
E ++ ++H N+ + C L++++ G L + L +I ++
Sbjct: 53 VRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDI--LVNW 110
Query: 1438 MIDVACALEYLHQGYSTSIIHCDLKPSNVLL-----DDDM---VAHLGDFGIAKLLDGVD 1489
+ +A + YLH IIH DLK SN+L+ + D+ + + DFG+A+
Sbjct: 111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT 170
Query: 1490 SMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
M A +MAPE + S DV+S+G+L+ E LT P
Sbjct: 171 KMSAAGAYA---WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 79.7 bits (195), Expect = 1e-14, Method: Composition-based stats.
Identities = 67/285 (23%), Positives = 116/285 (40%), Gaps = 45/285 (15%)
Query: 1343 LGTGIFSSVYKAT------FADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKI 1396
LG G F V+ A D A+K A K F E E++ ++H ++ K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 1397 VSSCSNPGFKALILQYMPQGSLEKWLYSH---------------NYLLNIEQRLDIMIDV 1441
C + ++ +YM G L K+L +H L + Q L I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 1442 ACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK-QTMTLATI 1500
A + YL S +H DL N L+ +++ +GDFG+++ + D + T+ I
Sbjct: 143 ASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 1501 GYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTD 1560
+M PE +T DV+SFG+++ E T K + W + S + +
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK------------QPWFQLSNTEVIEC 247
Query: 1561 VIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKD 1605
+ +L + C V + L C + P++R+N+K+
Sbjct: 248 ITQGRVLE--------RPRVCPKEVYDVMLGCWQREPQQRLNIKE 284
Score = 79.3 bits (194), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
+G G+FG V+ A Y ++ VA+K A K F E E+L ++H ++VK
Sbjct: 23 LGEGAFGKVFLAEC-YNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYSH---------------KYTLNIQQRLDIMID 849
C + ++ EYM G L K+L +H K L + Q L I
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 850 VASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV-TQTMTLAT 908
+AS + YL H +H DL N L+ + + + DFG+S+ + D T+
Sbjct: 142 IASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+M PE +T DV+SFG+++ E FT
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 23/232 (9%)
Query: 752 IGAGSFGSVYKATLPYGMNV-AIKVFNL-------QLDGAIKSFDAECEVLRRVRHRNLV 803
IG G FG V+K L +V AIK L ++ + F E ++ + H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
K+ H +++E++P G L L + + +L +M+D+A +EY+ + +P
Sbjct: 87 KLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP- 143
Query: 864 PVIHCDLKPSNVL---LDDD--TVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY-- 916
P++H DL+ N+ LD++ A ++DFG+S+ + + + L F +MAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNFQWMAPETIG 199
Query: 917 GSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWV-EESLRLAV 967
E + D YSF +++ T + P DE G+ + EE LR +
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTI 251
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 22/237 (9%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRA-------LKSFDAECE 1383
LA N +G G F V+K D + AIK L + + F E
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVAC 1443
+M + H N+ K+ NP ++++++P G L L + + +L +M+D+A
Sbjct: 76 IMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVL---LDDD--MVAHLGDFGIAKLLDGVDSMKQTMTLA 1498
+EY+ Q + I+H DL+ N+ LD++ + A + DFG+++ V S+ + L
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSV--SGLLG 188
Query: 1499 TIGYMAPEY--GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEES 1553
+MAPE E + D YSF +++ LT P D+ G++ + + E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 33/217 (15%)
Query: 1343 LGTGIFSSVYKATFA--------DGTNAAIKIFSLQED---RALKSFDAECEVMRRI-RH 1390
LG G F V A + A+K+ L++D + L +E E+M+ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWL---------YSHNYLLNIEQRLDIMIDV 1441
+N+ ++ +C+ G +I++Y +G+L ++L YS++ E+++ V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 1442 AC------ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM 1495
+C +EYL S IH DL NVL+ ++ V + DFG+A+ ++ +D K+T
Sbjct: 161 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 1496 T-LATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+LM E T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Score = 75.1 bits (183), Expect = 3e-13, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 112/231 (48%), Gaps = 37/231 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAIKSFD---AECEVLRRV-RHR 800
+G G+FG V A G++ V + V L+ D K +E E+++ + +H+
Sbjct: 43 LGEGAFGQVVMAE-AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK-------YTLN--------IQQRLD 845
N++ ++ +C+ G +I+EY +G+L ++L + + Y +N + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 846 IMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT 905
+A +EYL IH DL NVL+ ++ V ++DFG+++ ++ D +T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 906 -LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + + + DV+SFG+LM E FT +P +E+F
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 10/208 (4%)
Query: 739 LQRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNL--QLDGAIKSFDAECEVLRR 796
Q L + + + +G G++G VYKA G VA+K L + +G + E +L+
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 797 VRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
+ H N+V +I + L+ E+M + L+K L +K L Q I I + L
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQ---IKIYLYQLLRG 131
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE- 915
+ H H ++H DLKP N+L++ D L+DFG+++ G + T + T Y AP+
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVVTLWYRAPDV 190
Query: 916 -YGSEGIVSTCGDVYSFGILMIETFTRK 942
GS+ ST D++S G + E T K
Sbjct: 191 LMGSKK-YSTSVDIWSIGCIFAEMITGK 217
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 10/193 (5%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNLAKIVSSC 1400
+G G + VYKA + G A+K L ED + S E +++ + H N+ ++
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
+ L+ ++M + L+K L + L Q + + + + HQ I+H D
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRD 144
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--YGSEGIVSTSGD 1518
LKP N+L++ D L DFG+A+ G+ T + T+ Y AP+ GS+ STS D
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVVTLWYRAPDVLMGSKK-YSTSVD 202
Query: 1519 VYSFGILMMETLT 1531
++S G + E +T
Sbjct: 203 IWSIGCIFAEMIT 215
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 10/208 (4%)
Query: 739 LQRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNL--QLDGAIKSFDAECEVLRR 796
Q L + + + +G G++G VYKA G VA+K L + +G + E +L+
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 797 VRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
+ H N+V +I + L+ E+M + L+K L +K L Q I I + L
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQ---IKIYLYQLLRG 131
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE- 915
+ H H ++H DLKP N+L++ D L+DFG+++ G + T + T Y AP+
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVVTLWYRAPDV 190
Query: 916 -YGSEGIVSTCGDVYSFGILMIETFTRK 942
GS+ ST D++S G + E T K
Sbjct: 191 LMGSKK-YSTSVDIWSIGCIFAEMITGK 217
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 10/193 (5%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNLAKIVSSC 1400
+G G + VYKA + G A+K L ED + S E +++ + H N+ ++
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
+ L+ ++M + L+K L + L Q + + + + HQ I+H D
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRD 144
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--YGSEGIVSTSGD 1518
LKP N+L++ D L DFG+A+ G+ T + T+ Y AP+ GS+ STS D
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVVTLWYRAPDVLMGSKK-YSTSVD 202
Query: 1519 VYSFGILMMETLT 1531
++S G + E +T
Sbjct: 203 IWSIGCIFAEMIT 215
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 111/228 (48%), Gaps = 13/228 (5%)
Query: 746 FSESNLIGAGSFGSVY--KATLPYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHR 800
S ++GAG FG V + LP +++ + L++ + + F E ++ + H
Sbjct: 35 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 94
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG 860
N++++ + ++ EYM GSL+ +L H + Q + ++ +AS ++YL
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD- 153
Query: 861 HPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAPEYGS 918
+H DL N+L++ + V +SDFG+S++L D E + T + +PE +
Sbjct: 154 --MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 211
Query: 919 EGIVSTCGDVYSFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
++ DV+S+GI++ E + + P EM + K V+E RL
Sbjct: 212 YRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDEGYRL 257
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 1333 ATNGFSESNLLGTGIFSSV----YKATFADGTNAAIKIFSL-QEDRALKSFDAECEVMRR 1387
ATN S ++G G F V K + AIK + ++ + F E +M +
Sbjct: 32 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 90
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEY 1447
H N+ ++ + ++ +YM GSL+ +L H+ + Q + ++ +A ++Y
Sbjct: 91 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 150
Query: 1448 LHQ-GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMA 1504
L GY +H DL N+L++ ++V + DFG++++L+ T I + +
Sbjct: 151 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 206
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE + +++ DV+S+GI++ E ++
Sbjct: 207 PEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 33/217 (15%)
Query: 1343 LGTGIFSSVYKATFA--------DGTNAAIKIFSLQED---RALKSFDAECEVMRRI-RH 1390
LG G F V A + A+K+ L++D + L +E E+M+ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWL---------YSHNYLLNIEQRLDIMIDV 1441
+N+ ++ +C+ G +I++Y +G+L ++L YS++ E+++ V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 1442 AC------ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM 1495
+C +EYL S IH DL NVL+ ++ V + DFG+A+ ++ +D K+T
Sbjct: 161 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 1496 T-LATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+LM E T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Score = 74.7 bits (182), Expect = 4e-13, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 112/231 (48%), Gaps = 37/231 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAIKSFD---AECEVLRRV-RHR 800
+G G+FG V A G++ V + V L+ D K +E E+++ + +H+
Sbjct: 43 LGEGAFGQVVMAE-AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK-------YTLN--------IQQRLD 845
N++ ++ +C+ G +I+EY +G+L ++L + + Y +N + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 846 IMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT 905
+A +EYL IH DL NVL+ ++ V ++DFG+++ ++ D +T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 906 -LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + + + DV+SFG+LM E FT +P +E+F
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 110/225 (48%), Gaps = 13/225 (5%)
Query: 749 SNLIGAGSFGSVY--KATLPYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLV 803
++GAG FG V + LP +++ + L++ + + F E ++ + H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
++ + ++ EYM GSL+ +L H + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAPEYGSEGI 921
+H DL N+L++ + V +SDFG+S++L D E + T + +PE +
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 922 VSTCGDVYSFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
++ DV+S+GI++ E + + P EM + K V+E RL
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDEGYRL 269
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 98/206 (47%), Gaps = 11/206 (5%)
Query: 1333 ATNGFSESNLLGTGIFSSV----YKATFADGTNAAIKIFSL-QEDRALKSFDAECEVMRR 1387
ATN S ++G G F V K + AIK + ++ + F E +M +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEY 1447
H N+ ++ + ++ +YM GSL+ +L H+ + Q + ++ +A ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMAP 1505
L +H DL N+L++ ++V + DFG++++L+ T I + +P
Sbjct: 163 LSD---MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 1506 EYGSEGIVSTSGDVYSFGILMMETLT 1531
E + +++ DV+S+GI++ E ++
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 110/224 (49%), Gaps = 13/224 (5%)
Query: 750 NLIGAGSFGSVY--KATLPYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVK 804
++GAG FG V + LP +++ + L++ + + F E ++ + H N+++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
+ + ++ EYM GSL+ +L H + Q + ++ +AS ++YL
Sbjct: 82 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MG 138
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAPEYGSEGIV 922
+H DL N+L++ + V +SDFG+S++L D E + T + +PE +
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 198
Query: 923 STCGDVYSFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
++ DV+S+GI++ E + + P EM + K V+E RL
Sbjct: 199 TSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDEGYRL 240
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 1333 ATNGFSESNLLGTGIFSSV----YKATFADGTNAAIKIFSL-QEDRALKSFDAECEVMRR 1387
ATN S ++G G F V K + AIK + ++ + F E +M +
Sbjct: 15 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEY 1447
H N+ ++ + ++ +YM GSL+ +L H+ + Q + ++ +A ++Y
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 1448 LHQ-GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMA 1504
L GY +H DL N+L++ ++V + DFG++++L+ T I + +
Sbjct: 134 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 189
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE + +++ DV+S+GI++ E ++
Sbjct: 190 PEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.0 bits (193), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 7/162 (4%)
Query: 1372 DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNI 1431
+R + F +E +M + H N+ ++ + ++ +YM GSL+ +L +H+ I
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150
Query: 1432 EQRLDIMIDVACALEYLHQ-GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
Q + ++ V + YL GY +H DL NVL+D ++V + DFG++++L+
Sbjct: 151 MQLVGMLRGVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206
Query: 1491 MKQTMTLATIG--YMAPEYGSEGIVSTSGDVYSFGILMMETL 1530
T T I + APE + S++ DV+SFG++M E L
Sbjct: 207 AAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
Score = 77.8 bits (190), Expect = 4e-14, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 10/196 (5%)
Query: 751 LIGAGSFGSVYKATL--PYGMNVAIKVFNLQ---LDGAIKSFDAECEVLRRVRHRNLVKI 805
+IG+G G V L P +V + + L+ + + F +E ++ + H N++++
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 806 ISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPV 865
+ ++ EYM GSL+ +L +H I Q + ++ V + + YL
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGY 172
Query: 866 IHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFG--YMAPEYGSEGIVS 923
+H DL NVL+D + V +SDFG+S++L+ + T T + APE + S
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFS 232
Query: 924 TCGDVYSFGILMIETF 939
+ DV+SFG++M E
Sbjct: 233 SASDVWSFGVVMWEVL 248
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 79.0 bits (193), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 33/217 (15%)
Query: 1343 LGTGIFSSVYKATFA--------DGTNAAIKIFSLQED---RALKSFDAECEVMRRI-RH 1390
LG G F V A + A+K+ L++D + L +E E+M+ I +H
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWL---------YSHNYLLNIEQRLDIMIDV 1441
+N+ ++ +C+ G +I++Y +G+L ++L YS++ E+++ V
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 1442 AC------ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM 1495
+C +EYL S IH DL NVL+ ++ V + DFG+A+ ++ +D K+T
Sbjct: 148 SCTYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 1496 T-LATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+LM E T
Sbjct: 205 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
Score = 73.9 bits (180), Expect = 8e-13, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 37/231 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAIKSFD---AECEVLRRV-RHR 800
+G G FG V A G++ V + V L+ D K +E E+++ + +H+
Sbjct: 30 LGEGCFGQVVMAE-AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 88
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK-------YTLN--------IQQRLD 845
N++ ++ +C+ G +I+EY +G+L ++L + + Y +N + +
Sbjct: 89 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 148
Query: 846 IMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT 905
+A +EYL IH DL NVL+ ++ V ++DFG+++ ++ D +T
Sbjct: 149 CTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 906 -LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + + + DV+SFG+LM E FT +P +E+F
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 256
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 110/225 (48%), Gaps = 13/225 (5%)
Query: 749 SNLIGAGSFGSVY--KATLPYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLV 803
++GAG FG V + LP +++ + L++ + + F E ++ + H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
++ + ++ EYM GSL+ +L H + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAPEYGSEGI 921
+H DL N+L++ + V +SDFG+S++L D E + T + +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 922 VSTCGDVYSFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
++ DV+S+GI++ E + + P EM + K V+E RL
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDEGYRL 269
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 1333 ATNGFSESNLLGTGIFSSV----YKATFADGTNAAIKIFSL-QEDRALKSFDAECEVMRR 1387
ATN S ++G G F V K + AIK + ++ + F E +M +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEY 1447
H N+ ++ + ++ +YM GSL+ +L H+ + Q + ++ +A ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 1448 LHQ-GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMA 1504
L GY +H DL N+L++ ++V + DFG++++L+ T I + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE + +++ DV+S+GI++ E ++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 79.0 bits (193), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 33/217 (15%)
Query: 1343 LGTGIFSSVYKATFA--------DGTNAAIKIFSLQED---RALKSFDAECEVMRRI-RH 1390
LG G F V A + A+K+ L++D + L +E E+M+ I +H
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWL---------YSHNYLLNIEQRLDIMIDV 1441
+N+ ++ +C+ G +I++Y +G+L ++L YS++ E+++ V
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 1442 AC------ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM 1495
+C +EYL S IH DL NVL+ ++ V + DFG+A+ ++ +D K+T
Sbjct: 153 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 209
Query: 1496 T-LATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+LM E T
Sbjct: 210 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
Score = 73.6 bits (179), Expect = 8e-13, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 37/231 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAIKSFD---AECEVLRRV-RHR 800
+G G FG V A G++ V + V L+ D K +E E+++ + +H+
Sbjct: 35 LGEGCFGQVVMAE-AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 93
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK-------YTLN--------IQQRLD 845
N++ ++ +C+ G +I+EY +G+L ++L + + Y +N + +
Sbjct: 94 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 153
Query: 846 IMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT 905
+A +EYL IH DL NVL+ ++ V ++DFG+++ ++ D +T
Sbjct: 154 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 906 -LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + + + DV+SFG+LM E FT +P +E+F
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 261
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
Length = 313
Score = 79.0 bits (193), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 33/217 (15%)
Query: 1343 LGTGIFSSVYKATFA--------DGTNAAIKIFSLQED---RALKSFDAECEVMRRI-RH 1390
LG G F V A + A+K+ L++D + L +E E+M+ I +H
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWL---------YSHNYLLNIEQRLDIMIDV 1441
+N+ ++ +C+ G +I++Y +G+L ++L YS++ E+++ V
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 1442 AC------ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM 1495
+C +EYL S IH DL NVL+ ++ V + DFG+A+ ++ +D K+T
Sbjct: 150 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 1496 T-LATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+LM E T
Sbjct: 207 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
Score = 73.6 bits (179), Expect = 8e-13, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 37/231 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAIKSFD---AECEVLRRV-RHR 800
+G G FG V A G++ V + V L+ D K +E E+++ + +H+
Sbjct: 32 LGEGCFGQVVMAE-AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 90
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK-------YTLN--------IQQRLD 845
N++ ++ +C+ G +I+EY +G+L ++L + + Y +N + +
Sbjct: 91 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 150
Query: 846 IMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT 905
+A +EYL IH DL NVL+ ++ V ++DFG+++ ++ D +T
Sbjct: 151 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 906 -LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + + + DV+SFG+LM E FT +P +E+F
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 258
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 33/217 (15%)
Query: 1343 LGTGIFSSVYKATFA--------DGTNAAIKIF---SLQEDRALKSFDAECEVMRRI-RH 1390
LG G F V A + A+K+ + +ED L +E E+M+ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEED--LSDLVSEMEMMKMIGKH 100
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWL---------YSHNYLLNIEQRLDIMIDV 1441
+N+ ++ +C+ G +I++Y +G+L ++L YS++ E+++ V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 1442 AC------ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM 1495
+C +EYL S IH DL NVL+ ++ V + DFG+A+ ++ +D K+T
Sbjct: 161 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 1496 T-LATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+LM E T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Score = 73.6 bits (179), Expect = 1e-12, Method: Composition-based stats.
Identities = 59/231 (25%), Positives = 112/231 (48%), Gaps = 37/231 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGA---IKSFDAECEVLRRV-RHR 800
+G G+FG V A G++ V + V L+ D + +E E+++ + +H+
Sbjct: 43 LGEGAFGQVVMAE-AVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHK 101
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK-------YTLN--------IQQRLD 845
N++ ++ +C+ G +I+EY +G+L ++L + + Y +N + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 846 IMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT 905
+A +EYL IH DL NVL+ ++ V ++DFG+++ ++ D +T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 906 -LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + + + DV+SFG+LM E FT +P +E+F
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 79.0 bits (193), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 33/217 (15%)
Query: 1343 LGTGIFSSVYKATFA--------DGTNAAIKIFSLQED---RALKSFDAECEVMRRI-RH 1390
LG G F V A + A+K+ L++D + L +E E+M+ I +H
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWL---------YSHNYLLNIEQRLDIMIDV 1441
+N+ ++ +C+ G +I++Y +G+L ++L YS++ E+++ V
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 1442 AC------ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM 1495
+C +EYL S IH DL NVL+ ++ V + DFG+A+ ++ +D K+T
Sbjct: 207 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 263
Query: 1496 T-LATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+LM E T
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
Score = 73.6 bits (179), Expect = 8e-13, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 37/231 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAIKSFD---AECEVLRRV-RHR 800
+G G FG V A G++ V + V L+ D K +E E+++ + +H+
Sbjct: 89 LGEGCFGQVVMAE-AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 147
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK-------YTLN--------IQQRLD 845
N++ ++ +C+ G +I+EY +G+L ++L + + Y +N + +
Sbjct: 148 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207
Query: 846 IMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT 905
+A +EYL IH DL NVL+ ++ V ++DFG+++ ++ D +T
Sbjct: 208 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 906 -LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + + + DV+SFG+LM E FT +P +E+F
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 315
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 110/225 (48%), Gaps = 13/225 (5%)
Query: 749 SNLIGAGSFGSVY--KATLPYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLV 803
++GAG FG V + LP +++ + L++ + + F E ++ + H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
++ + ++ EYM GSL+ +L H + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAPEYGSEGI 921
+H DL N+L++ + V +SDFG+S++L D E + T + +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 922 VSTCGDVYSFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
++ DV+S+GI++ E + + P EM + K V+E RL
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDEGYRL 269
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 1333 ATNGFSESNLLGTGIFSSV----YKATFADGTNAAIKIFSL-QEDRALKSFDAECEVMRR 1387
ATN S ++G G F V K + AIK + ++ + F E +M +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEY 1447
H N+ ++ + ++ +YM GSL+ +L H+ + Q + ++ +A ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 1448 LHQ-GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMA 1504
L GY +H DL N+L++ ++V + DFG++++L+ T I + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE + +++ DV+S+GI++ E ++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 110/225 (48%), Gaps = 13/225 (5%)
Query: 749 SNLIGAGSFGSVY--KATLPYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLV 803
++GAG FG V + LP +++ + L++ + + F E ++ + H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
++ + ++ EYM GSL+ +L H + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAPEYGSEGI 921
+H DL N+L++ + V +SDFG+S++L D E + T + +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 922 VSTCGDVYSFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
++ DV+S+GI++ E + + P EM + K V+E RL
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDEGYRL 269
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 1333 ATNGFSESNLLGTGIFSSV----YKATFADGTNAAIKIFSL-QEDRALKSFDAECEVMRR 1387
ATN S ++G G F V K + AIK + ++ + F E +M +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEY 1447
H N+ ++ + ++ +YM GSL+ +L H+ + Q + ++ +A ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 1448 LHQ-GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMA 1504
L GY +H DL N+L++ ++V + DFG++++L+ T I + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE + +++ DV+S+GI++ E ++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 110/225 (48%), Gaps = 13/225 (5%)
Query: 749 SNLIGAGSFGSVY--KATLPYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLV 803
++GAG FG V + LP +++ + L++ + + F E ++ + H N++
Sbjct: 48 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 107
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
++ + ++ EYM GSL+ +L H + Q + ++ +AS ++YL
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 164
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAPEYGSEGI 921
+H DL N+L++ + V +SDFG+S++L D E + T + +PE +
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 224
Query: 922 VSTCGDVYSFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
++ DV+S+GI++ E + + P EM + K V+E RL
Sbjct: 225 FTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDEGYRL 267
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 1333 ATNGFSESNLLGTGIFSSV----YKATFADGTNAAIKIFSL-QEDRALKSFDAECEVMRR 1387
ATN S ++G G F V K + AIK + ++ + F E +M +
Sbjct: 42 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 100
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEY 1447
H N+ ++ + ++ +YM GSL+ +L H+ + Q + ++ +A ++Y
Sbjct: 101 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 160
Query: 1448 LHQ-GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMA 1504
L GY +H DL N+L++ ++V + DFG++++L+ T I + +
Sbjct: 161 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 216
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE + +++ DV+S+GI++ E ++
Sbjct: 217 PEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 110/225 (48%), Gaps = 13/225 (5%)
Query: 749 SNLIGAGSFGSVY--KATLPYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLV 803
++GAG FG V + LP +++ + L++ + + F E ++ + H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
++ + ++ EYM GSL+ +L H + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAPEYGSEGI 921
+H DL N+L++ + V +SDFG+S++L D E + T + +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 922 VSTCGDVYSFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
++ DV+S+GI++ E + + P EM + K V+E RL
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDEGYRL 269
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 1333 ATNGFSESNLLGTGIFSSV----YKATFADGTNAAIKIFSL-QEDRALKSFDAECEVMRR 1387
ATN S ++G G F V K + AIK + ++ + F E +M +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEY 1447
H N+ ++ + ++ +YM GSL+ +L H+ + Q + ++ +A ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 1448 LHQ-GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMA 1504
L GY +H DL N+L++ ++V + DFG++++L+ T I + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE + +++ DV+S+GI++ E ++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 33/217 (15%)
Query: 1343 LGTGIFSSVYKATFA--------DGTNAAIKIFSLQED---RALKSFDAECEVMRRI-RH 1390
LG G F V A + A+K+ L++D + L +E E+M+ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWL---------YSHNYLLNIEQRLDIMIDV 1441
+N+ ++ +C+ G +I++Y +G+L ++L YS++ E+++ V
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 1442 AC------ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM 1495
+C +EYL S IH DL NVL+ ++ V + DFG+A+ ++ +D K+T
Sbjct: 161 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 1496 T-LATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+LM E T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Score = 74.3 bits (181), Expect = 5e-13, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 112/231 (48%), Gaps = 37/231 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAIKSFD---AECEVLRRV-RHR 800
+G G+FG V A G++ V + V L+ D K +E E+++ + +H+
Sbjct: 43 LGEGAFGQVVMAE-AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK-------YTLN--------IQQRLD 845
N++ ++ +C+ G +I+EY +G+L ++L + + Y +N + +
Sbjct: 102 NIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 846 IMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT 905
+A +EYL IH DL NVL+ ++ V ++DFG+++ ++ D +T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 906 -LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + + + DV+SFG+LM E FT +P +E+F
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 3e-14, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 33/217 (15%)
Query: 1343 LGTGIFSSVYKATFA--------DGTNAAIKIFSLQED---RALKSFDAECEVMRRI-RH 1390
LG G F V A + A+K+ L++D + L +E E+M+ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWL---------YSHNYLLNIEQRLDIMIDV 1441
+N+ ++ +C+ G +I++Y +G+L ++L YS++ E+++ V
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 1442 AC------ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM 1495
+C +EYL S IH DL NVL+ ++ V + DFG+A+ ++ +D K+T
Sbjct: 161 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 1496 T-LATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+LM E T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Score = 74.3 bits (181), Expect = 5e-13, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 112/231 (48%), Gaps = 37/231 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAIKSFD---AECEVLRRV-RHR 800
+G G+FG V A G++ V + V L+ D K +E E+++ + +H+
Sbjct: 43 LGEGAFGQVVMAE-AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK-------YTLN--------IQQRLD 845
N++ ++ +C+ G +I+EY +G+L ++L + + Y +N + +
Sbjct: 102 NIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 846 IMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT 905
+A +EYL IH DL NVL+ ++ V ++DFG+++ ++ D +T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 906 -LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + + + DV+SFG+LM E FT +P +E+F
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 78.6 bits (192), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 7/162 (4%)
Query: 1372 DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNI 1431
+R + F +E +M + H N+ ++ + ++ +YM GSL+ +L +H+ I
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150
Query: 1432 EQRLDIMIDVACALEYLHQ-GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
Q + ++ V + YL GY +H DL NVL+D ++V + DFG++++L+
Sbjct: 151 MQLVGMLRGVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206
Query: 1491 MKQTMTLATIG--YMAPEYGSEGIVSTSGDVYSFGILMMETL 1530
T T I + APE + S++ DV+SFG++M E L
Sbjct: 207 AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 10/196 (5%)
Query: 751 LIGAGSFGSVYKATL--PYGMNVAIKVFNLQ---LDGAIKSFDAECEVLRRVRHRNLVKI 805
+IG+G G V L P +V + + L+ + + F +E ++ + H N++++
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 806 ISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPV 865
+ ++ EYM GSL+ +L +H I Q + ++ V + + YL
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGY 172
Query: 866 IHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFG--YMAPEYGSEGIVS 923
+H DL NVL+D + V +SDFG+S++L+ + T T + APE + S
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFS 232
Query: 924 TCGDVYSFGILMIETF 939
+ DV+SFG++M E
Sbjct: 233 SASDVWSFGVVMWEVL 248
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 23/232 (9%)
Query: 752 IGAGSFGSVYKATLPYGMNV-AIKVFNL-------QLDGAIKSFDAECEVLRRVRHRNLV 803
IG G FG V+K L +V AIK L ++ + F E ++ + H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
K+ H +++E++P G L L + + +L +M+D+A +EY+ + +P
Sbjct: 87 KLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP- 143
Query: 864 PVIHCDLKPSNVL---LDDDT--VAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY-- 916
P++H DL+ N+ LD++ A ++DFG S+ + + + L F +MAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNFQWMAPETIG 199
Query: 917 GSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWV-EESLRLAV 967
E + D YSF +++ T + P DE G+ + EE LR +
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTI 251
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 22/237 (9%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRA-------LKSFDAECE 1383
LA N +G G F V+K D + AIK L + + F E
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVAC 1443
+M + H N+ K+ NP ++++++P G L L + + +L +M+D+A
Sbjct: 76 IMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVL---LDDD--MVAHLGDFGIAKLLDGVDSMKQTMTLA 1498
+EY+ Q + I+H DL+ N+ LD++ + A + DFG ++ V S+ + L
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSV--SGLLG 188
Query: 1499 TIGYMAPEY--GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEES 1553
+MAPE E + D YSF +++ LT P D+ G++ + + E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 78.6 bits (192), Expect = 3e-14, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 17/200 (8%)
Query: 1343 LGTGIFSSV----YKATFADGTNAAIKIFSLQED---RALKSFDAECEVMRRIRHRNLAK 1395
LG G F V Y T DGT + + +L+ D + + E +++R + H ++ K
Sbjct: 22 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 1396 IVSSCSNPGFKAL--ILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
C + G K+L +++Y+P GSL +L H+ + + Q L + + YLH S
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---S 135
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL-DGVDSMK-QTMTLATIGYMAPEYGSEG 1511
IH +L NVLLD+D + +GDFG+AK + +G + + + + + + APE E
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 1512 IVSTSGDVYSFGILMMETLT 1531
+ DV+SFG+ + E LT
Sbjct: 196 KFYYASDVWSFGVTLYELLT 215
Score = 78.2 bits (191), Expect = 4e-14, Method: Composition-based stats.
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 752 IGAGSFGSV----YKATLP-YGMNVAIKVFNLQLDGAIKS-FDAECEVLRRVRHRNLVKI 805
+G G FG V Y T G VA+K +S + E ++LR + H +++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 806 ISSCSNHGFKAL--ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
C + G K+L ++EY+P GSL +L H ++ + Q L + + YLH H
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHSQH-- 137
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLL-DGED--SVTQTMTLATFGYMAPEYGSEG 920
IH +L NVLLD+D + + DFG++K + +G + V + F Y APE E
Sbjct: 138 -YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEY 195
Query: 921 IVSTCGDVYSFGILMIETFT 940
DV+SFG+ + E T
Sbjct: 196 KFYYASDVWSFGVTLYELLT 215
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 3e-14, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 33/217 (15%)
Query: 1343 LGTGIFSSVYKATFA--------DGTNAAIKIFSLQED---RALKSFDAECEVMRRI-RH 1390
LG G F V A + A+K+ L++D + L +E E+M+ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWL---------YSHNYLLNIEQRLDIMIDV 1441
+N+ ++ +C+ G +I++Y +G+L ++L YS++ E+++ V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 1442 AC------ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM 1495
+C +EYL S IH DL NVL+ ++ V + DFG+A+ ++ +D K T
Sbjct: 161 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 1496 T-LATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+LM E T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Score = 73.9 bits (180), Expect = 6e-13, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 37/231 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAIKSFD---AECEVLRRV-RHR 800
+G G+FG V A G++ V + V L+ D K +E E+++ + +H+
Sbjct: 43 LGEGAFGQVVMAE-AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK-------YTLN--------IQQRLD 845
N++ ++ +C+ G +I+EY +G+L ++L + + Y +N + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 846 IMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT 905
+A +EYL IH DL NVL+ ++ V ++DFG+++ ++ D T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 906 -LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + + + DV+SFG+LM E FT +P +E+F
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 78.2 bits (191), Expect = 3e-14, Method: Composition-based stats.
Identities = 65/200 (32%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 752 IGAGSFGSV----YKATLP-YGMNVAIKVFNLQLDGAIKS-FDAECEVLRRVRHRNLVKI 805
+G G FG V Y T G VA+K ++S + E E+LR + H ++VK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 806 ISSCSNHGFKA--LILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
C + G K+ L++EY+P GSL +L H + + Q L + + YLH H
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH--CVGLAQLLLFAQQICEGMAYLHAQH-- 131
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLL-DGED--SVTQTMTLATFGYMAPEYGSEG 920
IH L NVLLD+D + + DFG++K + +G + V + F Y APE E
Sbjct: 132 -YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEC 189
Query: 921 IVSTCGDVYSFGILMIETFT 940
DV+SFG+ + E T
Sbjct: 190 KFYYASDVWSFGVTLYELLT 209
Score = 76.6 bits (187), Expect = 1e-13, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 1343 LGTGIFSSV----YKATFADGTNAAIKIFSLQED---RALKSFDAECEVMRRIRHRNLAK 1395
LG G F V Y T DGT + + +L+E + + E E++R + H ++ K
Sbjct: 16 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 1396 IVSSCSNPGFKA--LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
C + G K+ L+++Y+P GSL +L H + + Q L + + YLH +
Sbjct: 75 YKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH--CVGLAQLLLFAQQICEGMAYLH---A 129
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL-DGVDSMK-QTMTLATIGYMAPEYGSEG 1511
IH L NVLLD+D + +GDFG+AK + +G + + + + + + APE E
Sbjct: 130 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 189
Query: 1512 IVSTSGDVYSFGILMMETLT 1531
+ DV+SFG+ + E LT
Sbjct: 190 KFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 78.2 bits (191), Expect = 3e-14, Method: Composition-based stats.
Identities = 65/200 (32%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 752 IGAGSFGSV----YKATLP-YGMNVAIKVFNLQLDGAIKS-FDAECEVLRRVRHRNLVKI 805
+G G FG V Y T G VA+K ++S + E E+LR + H ++VK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 806 ISSCSNHGFKA--LILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
C + G K+ L++EY+P GSL +L H + + Q L + + YLH H
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH--CVGLAQLLLFAQQICEGMAYLHAQH-- 132
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLL-DGED--SVTQTMTLATFGYMAPEYGSEG 920
IH L NVLLD+D + + DFG++K + +G + V + F Y APE E
Sbjct: 133 -YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEC 190
Query: 921 IVSTCGDVYSFGILMIETFT 940
DV+SFG+ + E T
Sbjct: 191 KFYYASDVWSFGVTLYELLT 210
Score = 76.6 bits (187), Expect = 1e-13, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 1343 LGTGIFSSV----YKATFADGTNAAIKIFSLQED---RALKSFDAECEVMRRIRHRNLAK 1395
LG G F V Y T DGT + + +L+E + + E E++R + H ++ K
Sbjct: 17 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 1396 IVSSCSNPGFKA--LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
C + G K+ L+++Y+P GSL +L H + + Q L + + YLH +
Sbjct: 76 YKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH--CVGLAQLLLFAQQICEGMAYLH---A 130
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL-DGVDSMK-QTMTLATIGYMAPEYGSEG 1511
IH L NVLLD+D + +GDFG+AK + +G + + + + + + APE E
Sbjct: 131 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 190
Query: 1512 IVSTSGDVYSFGILMMETLT 1531
+ DV+SFG+ + E LT
Sbjct: 191 KFYYASDVWSFGVTLYELLT 210
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 78.2 bits (191), Expect = 4e-14, Method: Composition-based stats.
Identities = 70/292 (23%), Positives = 122/292 (41%), Gaps = 44/292 (15%)
Query: 1343 LGTGIFSSVYKATF------ADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKI 1396
LG G F V+ A D A+K + A + F E E++ ++H+++ +
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 1397 VSSCSNPGFKALILQYMPQGSLEKWLYSHNY--------------LLNIEQRLDIMIDVA 1442
C+ ++ +YM G L ++L SH L + Q L + VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK-QTMTLATIG 1501
+ YL +H DL N L+ +V +GDFG+++ + D + T+ I
Sbjct: 146 AGMVYLA---GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 1502 YMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDV 1561
+M PE +T DV+SFG+++ E T K + W + S T+
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGK------------QPWYQLS----NTEA 246
Query: 1562 IDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKI 1613
ID + G E + + C V ++ C + P++R ++KD A L+ +
Sbjct: 247 IDC-ITQGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 294
Score = 75.1 bits (183), Expect = 3e-13, Method: Composition-based stats.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 752 IGAGSFGSVYKAT----LPY--GMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKI 805
+G G+FG V+ A LP M VA+K + A + F E E+L ++H+++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 806 ISSCSNHGFKALILEYMPQGSLEKWLYSH--------------KYTLNIQQRLDIMIDVA 851
C+ ++ EYM G L ++L SH L + Q L + VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV-TQTMTLATFG 910
+ + YL H +H DL N L+ V + DFG+S+ + D T+
Sbjct: 146 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 911 YMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+M PE +T DV+SFG+++ E FT
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 78.2 bits (191), Expect = 4e-14, Method: Composition-based stats.
Identities = 70/292 (23%), Positives = 122/292 (41%), Gaps = 44/292 (15%)
Query: 1343 LGTGIFSSVYKATF------ADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKI 1396
LG G F V+ A D A+K + A + F E E++ ++H+++ +
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 1397 VSSCSNPGFKALILQYMPQGSLEKWLYSHNY--------------LLNIEQRLDIMIDVA 1442
C+ ++ +YM G L ++L SH L + Q L + VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK-QTMTLATIG 1501
+ YL +H DL N L+ +V +GDFG+++ + D + T+ I
Sbjct: 140 AGMVYLA---GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 1502 YMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDV 1561
+M PE +T DV+SFG+++ E T K + W + S T+
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGK------------QPWYQLS----NTEA 240
Query: 1562 IDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKI 1613
ID + G E + + C V ++ C + P++R ++KD A L+ +
Sbjct: 241 IDC-ITQGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 288
Score = 75.1 bits (183), Expect = 3e-13, Method: Composition-based stats.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 752 IGAGSFGSVYKAT----LPY--GMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKI 805
+G G+FG V+ A LP M VA+K + A + F E E+L ++H+++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 806 ISSCSNHGFKALILEYMPQGSLEKWLYSH--------------KYTLNIQQRLDIMIDVA 851
C+ ++ EYM G L ++L SH L + Q L + VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV-TQTMTLATFG 910
+ + YL H +H DL N L+ V + DFG+S+ + D T+
Sbjct: 140 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 911 YMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+M PE +T DV+SFG+++ E FT
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 78.2 bits (191), Expect = 4e-14, Method: Composition-based stats.
Identities = 70/292 (23%), Positives = 122/292 (41%), Gaps = 44/292 (15%)
Query: 1343 LGTGIFSSVYKATF------ADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKI 1396
LG G F V+ A D A+K + A + F E E++ ++H+++ +
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 1397 VSSCSNPGFKALILQYMPQGSLEKWLYSHNY--------------LLNIEQRLDIMIDVA 1442
C+ ++ +YM G L ++L SH L + Q L + VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK-QTMTLATIG 1501
+ YL +H DL N L+ +V +GDFG+++ + D + T+ I
Sbjct: 169 AGMVYLA---GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 1502 YMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDV 1561
+M PE +T DV+SFG+++ E T K + W + S T+
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGK------------QPWYQLS----NTEA 269
Query: 1562 IDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKI 1613
ID + G E + + C V ++ C + P++R ++KD A L+ +
Sbjct: 270 IDC-ITQGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317
Score = 75.1 bits (183), Expect = 3e-13, Method: Composition-based stats.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 752 IGAGSFGSVYKAT----LPY--GMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKI 805
+G G+FG V+ A LP M VA+K + A + F E E+L ++H+++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 806 ISSCSNHGFKALILEYMPQGSLEKWLYSH--------------KYTLNIQQRLDIMIDVA 851
C+ ++ EYM G L ++L SH L + Q L + VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV-TQTMTLATFG 910
+ + YL H +H DL N L+ V + DFG+S+ + D T+
Sbjct: 169 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 911 YMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+M PE +T DV+SFG+++ E FT
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 78.2 bits (191), Expect = 4e-14, Method: Composition-based stats.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 17/200 (8%)
Query: 1343 LGTGIFSSV----YKATFADGTNAAIKIFSLQEDRALK---SFDAECEVMRRIRHRNLAK 1395
LG G F V Y T DGT + + +L+ D + + E +++R + H ++ K
Sbjct: 39 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 1396 IVSSCSNPGFKAL--ILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
C + G +L +++Y+P GSL +L H+ + + Q L + + YLH +
Sbjct: 98 YKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---A 152
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL-DGVDSMK-QTMTLATIGYMAPEYGSEG 1511
IH DL NVLLD+D + +GDFG+AK + +G + + + + + + APE E
Sbjct: 153 QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEY 212
Query: 1512 IVSTSGDVYSFGILMMETLT 1531
+ DV+SFG+ + E LT
Sbjct: 213 KFYYASDVWSFGVTLYELLT 232
Score = 77.0 bits (188), Expect = 8e-14, Method: Composition-based stats.
Identities = 63/200 (31%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 752 IGAGSFGSV----YKATLP-YGMNVAIKVFNLQLDGAIKS-FDAECEVLRRVRHRNLVKI 805
+G G FG V Y T G VA+K +S + E ++LR + H +++K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 806 ISSCSNHGFKAL--ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
C + G +L ++EY+P GSL +L H ++ + Q L + + YLH H
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQH-- 154
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLL-DGEDS--VTQTMTLATFGYMAPEYGSEG 920
IH DL NVLLD+D + + DFG++K + +G + V + F Y APE E
Sbjct: 155 -YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECLKEY 212
Query: 921 IVSTCGDVYSFGILMIETFT 940
DV+SFG+ + E T
Sbjct: 213 KFYYASDVWSFGVTLYELLT 232
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 110/225 (48%), Gaps = 13/225 (5%)
Query: 749 SNLIGAGSFGSVY--KATLPYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLV 803
++GAG FG V + LP +++ + L++ + + F E ++ + H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
++ + ++ EYM GSL+ +L H + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAPEYGSEGI 921
+H DL N+L++ + V +SDFG++++L D E + T + +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 922 VSTCGDVYSFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
++ DV+S+GI++ E + + P EM + K V+E RL
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDEGYRL 269
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 1333 ATNGFSESNLLGTGIFSSV----YKATFADGTNAAIKIFSL-QEDRALKSFDAECEVMRR 1387
ATN S ++G G F V K + AIK + ++ + F E +M +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEY 1447
H N+ ++ + ++ +YM GSL+ +L H+ + Q + ++ +A ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 1448 LHQ-GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMA 1504
L GY +H DL N+L++ ++V + DFG+A++L+ T I + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE + +++ DV+S+GI++ E ++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 77.8 bits (190), Expect = 4e-14, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 33/217 (15%)
Query: 1343 LGTGIFSSVYKATFA--------DGTNAAIKIFSLQED---RALKSFDAECEVMRRI-RH 1390
LG G F V A + A+K+ L++D + L +E E+M+ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSH-------NYLLN--IEQRLDIMIDV 1441
+N+ ++ +C+ G +I++Y +G+L ++L + +Y +N E+++ V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 1442 AC------ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM 1495
+C +EYL S IH DL NVL+ ++ V + DFG+A+ ++ +D K+T
Sbjct: 161 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 1496 T-LATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+LM E T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Score = 75.1 bits (183), Expect = 3e-13, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 112/231 (48%), Gaps = 37/231 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAIKSFD---AECEVLRRV-RHR 800
+G G+FG V A G++ V + V L+ D K +E E+++ + +H+
Sbjct: 43 LGEGAFGQVVMAE-AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK-------YTLN--------IQQRLD 845
N++ ++ +C+ G +I+EY +G+L ++L + + Y +N + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVS 161
Query: 846 IMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT 905
+A +EYL IH DL NVL+ ++ V ++DFG+++ ++ D +T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 906 -LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + + + DV+SFG+LM E FT +P +E+F
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 77.8 bits (190), Expect = 5e-14, Method: Composition-based stats.
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 752 IGAGSFGSV----YKATLP-YGMNVAIKVFNLQLDGAIKS-FDAECEVLRRVRHRNLVKI 805
+G G FG V Y T G VA+K +S + E ++LR + H +++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 806 ISSCSNHGFKAL--ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
C + G K+L ++EY+P GSL +L H ++ + Q L + + YLH H
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQH-- 137
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLL-DGED--SVTQTMTLATFGYMAPEYGSEG 920
IH +L NVLLD+D + + DFG++K + +G + V + F Y APE E
Sbjct: 138 -YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEY 195
Query: 921 IVSTCGDVYSFGILMIETFT 940
DV+SFG+ + E T
Sbjct: 196 KFYYASDVWSFGVTLYELLT 215
Score = 77.4 bits (189), Expect = 7e-14, Method: Composition-based stats.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 17/200 (8%)
Query: 1343 LGTGIFSSV----YKATFADGTNAAIKIFSLQED---RALKSFDAECEVMRRIRHRNLAK 1395
LG G F V Y T DGT + + +L+ D + + E +++R + H ++ K
Sbjct: 22 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 1396 IVSSCSNPGFKAL--ILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
C + G K+L +++Y+P GSL +L H+ + + Q L + + YLH +
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---A 135
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL-DGVDSMK-QTMTLATIGYMAPEYGSEG 1511
IH +L NVLLD+D + +GDFG+AK + +G + + + + + + APE E
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 1512 IVSTSGDVYSFGILMMETLT 1531
+ DV+SFG+ + E LT
Sbjct: 196 KFYYASDVWSFGVTLYELLT 215
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 77.8 bits (190), Expect = 5e-14, Method: Composition-based stats.
Identities = 50/193 (25%), Positives = 99/193 (51%), Gaps = 5/193 (2%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ + + T A+K ++++F E +M+ ++H L ++ + +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 1403 PGFKALILQYMPQGSLEKWLYS-HNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
+I +YM +GSL +L S + + + +D +A + Y+ + + IH DL
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDL 136
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +NVL+ + ++ + DFG+A++++ + + I + APE + G + DV+S
Sbjct: 137 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWS 196
Query: 1522 FGILMMETLTRRK 1534
FGIL+ E +T K
Sbjct: 197 FGILLYEIVTYGK 209
Score = 76.6 bits (187), Expect = 9e-14, Method: Composition-based stats.
Identities = 51/195 (26%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN 811
+GAG FG V+ VA+K ++++F E +++ ++H LV++ + +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 812 HGFKALILEYMPQGSLEKWLYSHKY-TLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+I EYM +GSL +L S + + + + +D +A + Y+ + IH DL
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDL 136
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
+ +NVL+ + + ++DFG++++++ + + + APE + G + DV+S
Sbjct: 137 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWS 196
Query: 931 FGILMIETFTR-KMP 944
FGIL+ E T K+P
Sbjct: 197 FGILLYEIVTYGKIP 211
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 5e-14, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 33/217 (15%)
Query: 1343 LGTGIFSSVYKATFA--------DGTNAAIKIFSLQED---RALKSFDAECEVMRRI-RH 1390
LG G F V A + A+K+ L++D + L +E E+M+ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWL---------YSHNYLLNIEQRLDIMIDV 1441
+N+ ++ +C+ G +I+ Y +G+L ++L YS++ E+++ V
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 1442 AC------ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM 1495
+C +EYL S IH DL NVL+ ++ V + DFG+A+ ++ +D K+T
Sbjct: 161 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 1496 T-LATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+LM E T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 59/231 (25%), Positives = 111/231 (48%), Gaps = 37/231 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAIKSFD---AECEVLRRV-RHR 800
+G G+FG V A G++ V + V L+ D K +E E+++ + +H+
Sbjct: 43 LGEGAFGQVVMAE-AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK-------YTLN--------IQQRLD 845
N++ ++ +C+ G +I+ Y +G+L ++L + + Y +N + +
Sbjct: 102 NIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 846 IMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT 905
+A +EYL IH DL NVL+ ++ V ++DFG+++ ++ D +T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 906 -LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + + + DV+SFG+LM E FT +P +E+F
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 77.8 bits (190), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 12/205 (5%)
Query: 749 SNLIGAGSFGSVYKATL----PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLV 803
+ +IG G FG VY TL ++ A+K N D G + F E +++ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 804 KIISSC-SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
++ C + G ++L YM G L ++ + + ++ + + VA +++L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 152
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGE-DSV-TQTMTLATFGYMAPEYGSE 919
+H DL N +LD+ ++DFG+++ +LD E DSV +T +MA E
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
+T DV+SFG+L+ E TR P
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAP 237
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 120/288 (41%), Gaps = 32/288 (11%)
Query: 1340 SNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-----ALKSFDAECEVMRRIRHRNLA 1394
+ ++G G F VY T D I +R + F E +M+ H N+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 1395 KIVSSC-SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
++ C + G ++L YM G L ++ + + ++ + + VA +++L S
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 152
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDG-VDSMK-QTMTLATIGYMAPEYGSE 1510
+H DL N +LD+ + DFG+A+ +LD DS+ +T + +MA E
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 1511 GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570
+T DV+SFG+L+ E +TR P PD T I LL G
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAP-----------------PYPDVNTFDITVYLLQGR 255
Query: 1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618
+ + C + + LKC E R + + ++ + I + F+
Sbjct: 256 R---LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 300
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 77.4 bits (189), Expect = 6e-14, Method: Composition-based stats.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 752 IGAGSFGSVYKATL-PYGMNVA--IKVFNLQLDGA--IKSFDAECEVLRRVRHRNLVKII 806
+G G+FGSV P G N + V LQ G + F E ++L+ + +VK
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 807 SSCSNHGFKAL--ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
G ++L ++EY+P G L +L H+ L+ + L + +EYL
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR--- 134
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKL--LDGEDSVTQTMTLATFGYMAPEYGSEGIV 922
+H DL N+L++ + ++DFG++KL LD + V + + + APE S+ I
Sbjct: 135 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 194
Query: 923 STCGDVYSFGILMIETFT 940
S DV+SFG+++ E FT
Sbjct: 195 SRQSDVWSFGVVLYELFT 212
Score = 74.3 bits (181), Expect = 6e-13, Method: Composition-based stats.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 1343 LGTGIFSSVYKATF---ADGTNAAIKIFSLQED--RALKSFDAECEVMRRIRHRNLAKIV 1397
LG G F SV + D T A + + LQ + F E ++++ + + K
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 1398 SSCSNPGFKAL--ILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
PG ++L +++Y+P G L +L H L+ + L + +EYL S
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 134
Query: 1456 IIHCDLKPSNVLLDDDMVAHLGDFGIAKL--LDGVDSMKQTMTLATIGYMAPEYGSEGIV 1513
+H DL N+L++ + + DFG+AKL LD + + + I + APE S+ I
Sbjct: 135 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 194
Query: 1514 STSGDVYSFGILMMETLT 1531
S DV+SFG+++ E T
Sbjct: 195 SRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 77.4 bits (189), Expect = 6e-14, Method: Composition-based stats.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 752 IGAGSFGSVYKATL-PYGMNVA--IKVFNLQLDGA--IKSFDAECEVLRRVRHRNLVKII 806
+G G+FGSV P G N + V LQ G + F E ++L+ + +VK
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 807 SSCSNHGFKAL--ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
G ++L ++EY+P G L +L H+ L+ + L + +EYL
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR--- 135
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKL--LDGEDSVTQTMTLATFGYMAPEYGSEGIV 922
+H DL N+L++ + ++DFG++KL LD + V + + + APE S+ I
Sbjct: 136 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 195
Query: 923 STCGDVYSFGILMIETFT 940
S DV+SFG+++ E FT
Sbjct: 196 SRQSDVWSFGVVLYELFT 213
Score = 74.3 bits (181), Expect = 6e-13, Method: Composition-based stats.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 1343 LGTGIFSSVYKATF---ADGTNAAIKIFSLQED--RALKSFDAECEVMRRIRHRNLAKIV 1397
LG G F SV + D T A + + LQ + F E ++++ + + K
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 1398 SSCSNPGFKAL--ILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
PG ++L +++Y+P G L +L H L+ + L + +EYL S
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 135
Query: 1456 IIHCDLKPSNVLLDDDMVAHLGDFGIAKL--LDGVDSMKQTMTLATIGYMAPEYGSEGIV 1513
+H DL N+L++ + + DFG+AKL LD + + + I + APE S+ I
Sbjct: 136 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 195
Query: 1514 STSGDVYSFGILMMETLT 1531
S DV+SFG+++ E T
Sbjct: 196 SRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 77.4 bits (189), Expect = 6e-14, Method: Composition-based stats.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 752 IGAGSFGSVYKATL-PYGMNVA--IKVFNLQLDGA--IKSFDAECEVLRRVRHRNLVKII 806
+G G+FGSV P G N + V LQ G + F E ++L+ + +VK
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 807 SSCSNHGFKAL--ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
G ++L ++EY+P G L +L H+ L+ + L + +EYL
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR--- 147
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKL--LDGEDSVTQTMTLATFGYMAPEYGSEGIV 922
+H DL N+L++ + ++DFG++KL LD + V + + + APE S+ I
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 207
Query: 923 STCGDVYSFGILMIETFT 940
S DV+SFG+++ E FT
Sbjct: 208 SRQSDVWSFGVVLYELFT 225
Score = 74.3 bits (181), Expect = 6e-13, Method: Composition-based stats.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 1343 LGTGIFSSVYKATF---ADGTNAAIKIFSLQED--RALKSFDAECEVMRRIRHRNLAKIV 1397
LG G F SV + D T A + + LQ + F E ++++ + + K
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 1398 SSCSNPGFKAL--ILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
PG ++L +++Y+P G L +L H L+ + L + +EYL S
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 147
Query: 1456 IIHCDLKPSNVLLDDDMVAHLGDFGIAKL--LDGVDSMKQTMTLATIGYMAPEYGSEGIV 1513
+H DL N+L++ + + DFG+AKL LD + + + I + APE S+ I
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 207
Query: 1514 STSGDVYSFGILMMETLT 1531
S DV+SFG+++ E T
Sbjct: 208 SRQSDVWSFGVVLYELFT 225
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 109/225 (48%), Gaps = 13/225 (5%)
Query: 749 SNLIGAGSFGSVY--KATLPYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLV 803
++GAG FG V + LP +++ + L++ + + F E ++ + H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
++ + ++ EYM GSL+ +L H + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAPEYGSEGI 921
+H DL N+L++ + V +SDFG+ ++L D E + T + +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 922 VSTCGDVYSFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
++ DV+S+GI++ E + + P EM + K V+E RL
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDEGYRL 269
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 1333 ATNGFSESNLLGTGIFSSV----YKATFADGTNAAIKIFSL-QEDRALKSFDAECEVMRR 1387
ATN S ++G G F V K + AIK + ++ + F E +M +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEY 1447
H N+ ++ + ++ +YM GSL+ +L H+ + Q + ++ +A ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 1448 LHQ-GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMA 1504
L GY +H DL N+L++ ++V + DFG+ ++L+ T I + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE + +++ DV+S+GI++ E ++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 749 SNLIGAGSFGSVYKATL----PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLV 803
+ +IG G FG VY TL ++ A+K N D G + F E +++ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 804 KIISSC-SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
++ C + G ++L YM G L ++ + + ++ + + VA ++YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 150
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTMTLATF--GYMAPEYGSE 919
+H DL N +LD+ ++DFG+++ + D E T A +MA E
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
+T DV+SFG+L+ E TR P
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAP 235
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 116/288 (40%), Gaps = 32/288 (11%)
Query: 1340 SNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-----ALKSFDAECEVMRRIRHRNLA 1394
+ ++G G F VY T D I +R + F E +M+ H N+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 1395 KIVSSC-SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
++ C + G ++L YM G L ++ + + ++ + + VA ++YL S
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 150
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL---DGVDSMKQTMTLATIGYMAPEYGSE 1510
+H DL N +LD+ + DFG+A+ + + +T + +MA E
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 1511 GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570
+T DV+SFG+L+ E +TR P PD T I LL G
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAP-----------------PYPDVNTFDITVYLLQGR 253
Query: 1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618
+ + C + + LKC E R + + ++ + I + F+
Sbjct: 254 R---LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 298
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 6e-14, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 33/217 (15%)
Query: 1343 LGTGIFSSVYKATFA--------DGTNAAIKIFSLQED---RALKSFDAECEVMRRI-RH 1390
LG G F V A + A+K+ L++D + L +E E+M+ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWL---------YSHNYLLNIEQRLDIMIDV 1441
+N+ ++ +C+ G +I+ Y +G+L ++L YS++ E+++ V
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 1442 AC------ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM 1495
+C +EYL S IH DL NVL+ ++ V + DFG+A+ ++ +D K+T
Sbjct: 161 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 1496 T-LATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+LM E T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Score = 71.6 bits (174), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/231 (25%), Positives = 111/231 (48%), Gaps = 37/231 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAIKSFD---AECEVLRRV-RHR 800
+G G+FG V A G++ V + V L+ D K +E E+++ + +H+
Sbjct: 43 LGEGAFGQVVMAE-AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK-------YTLN--------IQQRLD 845
N++ ++ +C+ G +I+ Y +G+L ++L + + Y +N + +
Sbjct: 102 NIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 846 IMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT 905
+A +EYL IH DL NVL+ ++ V ++DFG+++ ++ D +T
Sbjct: 162 CTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 906 -LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMF 949
+MAPE + + + DV+SFG+LM E FT +P +E+F
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.0 bits (188), Expect = 7e-14, Method: Composition-based stats.
Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 752 IGAGSFGSVYKATL-PYGMNVA--IKVFNLQLDGA--IKSFDAECEVLRRVRHRNLVKI- 805
+G G+FGSV P G N + V LQ G + F E ++L+ + +VK
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 806 -ISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
+S L++EY+P G L +L H+ L+ + L + +EYL
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR--- 131
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAPEYGSEGIV 922
+H DL N+L++ + ++DFG++KLL D + V + + + APE S+ I
Sbjct: 132 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIF 191
Query: 923 STCGDVYSFGILMIETFT 940
S DV+SFG+++ E FT
Sbjct: 192 SRQSDVWSFGVVLYELFT 209
Score = 73.6 bits (179), Expect = 8e-13, Method: Composition-based stats.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 1343 LGTGIFSSVYKATF---ADGTNAAIKIFSLQED--RALKSFDAECEVMRRIRHRNLAKIV 1397
LG G F SV + D T A + + LQ + F E ++++ + + K
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 1398 SSCSNPGFKAL--ILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
PG L +++Y+P G L +L H L+ + L + +EYL S
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 131
Query: 1456 IIHCDLKPSNVLLDDDMVAHLGDFGIAKL--LDGVDSMKQTMTLATIGYMAPEYGSEGIV 1513
+H DL N+L++ + + DFG+AKL LD + + + I + APE S+ I
Sbjct: 132 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIF 191
Query: 1514 STSGDVYSFGILMMETLT 1531
S DV+SFG+++ E T
Sbjct: 192 SRQSDVWSFGVVLYELFT 209
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 23/232 (9%)
Query: 752 IGAGSFGSVYKATLPYGMNV-AIKVFNL-------QLDGAIKSFDAECEVLRRVRHRNLV 803
IG G FG V+K L +V AIK L ++ + F E ++ + H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
K+ H +++E++P G L L + + +L +M+D+A +EY+ + +P
Sbjct: 87 KLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP- 143
Query: 864 PVIHCDLKPSNVL---LDDD--TVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY-- 916
P++H DL+ N+ LD++ A ++DF +S+ + + + L F +MAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNFQWMAPETIG 199
Query: 917 GSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWV-EESLRLAV 967
E + D YSF +++ T + P DE G+ + EE LR +
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTI 251
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 22/237 (9%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRA-------LKSFDAECE 1383
LA N +G G F V+K D + AIK L + + F E
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVAC 1443
+M + H N+ K+ NP ++++++P G L L + + +L +M+D+A
Sbjct: 76 IMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVL---LDDD--MVAHLGDFGIAKLLDGVDSMKQTMTLA 1498
+EY+ Q + I+H DL+ N+ LD++ + A + DF +++ V S+ + L
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSV--SGLLG 188
Query: 1499 TIGYMAPEY--GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEES 1553
+MAPE E + D YSF +++ LT P D+ G++ + + E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 109/224 (48%), Gaps = 13/224 (5%)
Query: 750 NLIGAGSFGSVY--KATLPYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVK 804
++GAG FG V + LP +++ + L++ + + F E ++ + H N+++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
+ + ++ E M GSL+ +L H + Q + ++ +AS ++YL
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MG 167
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAPEYGSEGIV 922
+H DL N+L++ + V +SDFG+S++L D E + T + +PE +
Sbjct: 168 AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 923 STCGDVYSFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
++ DV+S+GI++ E + + P EM + K V+E RL
Sbjct: 228 TSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDEGYRL 269
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 97/206 (47%), Gaps = 11/206 (5%)
Query: 1333 ATNGFSESNLLGTGIFSSV----YKATFADGTNAAIKIFSL-QEDRALKSFDAECEVMRR 1387
ATN S ++G G F V K + AIK + ++ + F E +M +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEY 1447
H N+ ++ + ++ + M GSL+ +L H+ + Q + ++ +A ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMAP 1505
L +H DL N+L++ ++V + DFG++++L+ T I + +P
Sbjct: 163 LSD---MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 1506 EYGSEGIVSTSGDVYSFGILMMETLT 1531
E + +++ DV+S+GI++ E ++
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With Flavonoid
Glycoside Quercitrin
Length = 305
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 65/209 (31%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 1337 FSESNLLGTGIFSSVYKATFADGTNA----AIKIFSLQEDRALKSFD-----AECEVMRR 1387
F +LG G F V+ G++A A+K+ + LK D E +++
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL---KKATLKVRDRVRTKMERDILVE 83
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEY 1447
+ H + K+ + G LIL ++ G L L S + E + ++A AL++
Sbjct: 84 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDH 142
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTL-ATIGYMAPE 1506
LH S II+ DLKP N+LLD++ L DFG++K + +D K+ + T+ YMAPE
Sbjct: 143 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPE 197
Query: 1507 YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
+ + S D +SFG+LM E LT P
Sbjct: 198 VVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
Score = 73.2 bits (178), Expect = 1e-12, Method: Composition-based stats.
Identities = 63/208 (30%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 746 FSESNLIGAGSFGSVY--------KATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV 797
F ++G GSFG V+ A Y M V +K L++ +++ E ++L V
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKV-LKKATLKVRDRVRT-KMERDILVEV 84
Query: 798 RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYL 857
H +VK+ + G LIL+++ G L L K + ++ D+ +A L
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEE--DVKFYLAELALAL 140
Query: 858 HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEY 916
H H +I+ DLKP N+LLD++ L+DFG+SK + D + + T YMAPE
Sbjct: 141 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEV 198
Query: 917 GSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ + D +SFG+LM E T +P
Sbjct: 199 VNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 65/209 (31%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 1337 FSESNLLGTGIFSSVYKATFADGTNA----AIKIFSLQEDRALKSFD-----AECEVMRR 1387
F +LG G F V+ G++A A+K+ + LK D E +++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL---KKATLKVRDRVRTKMERDILVE 82
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEY 1447
+ H + K+ + G LIL ++ G L L S + E + ++A AL++
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDH 141
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTL-ATIGYMAPE 1506
LH S II+ DLKP N+LLD++ L DFG++K + +D K+ + T+ YMAPE
Sbjct: 142 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPE 196
Query: 1507 YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
+ + S D +SFG+LM E LT P
Sbjct: 197 VVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
Score = 73.2 bits (178), Expect = 1e-12, Method: Composition-based stats.
Identities = 63/208 (30%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 746 FSESNLIGAGSFGSVY--------KATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV 797
F ++G GSFG V+ A Y M V +K L++ +++ E ++L V
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKV-LKKATLKVRDRVRT-KMERDILVEV 83
Query: 798 RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYL 857
H +VK+ + G LIL+++ G L L K + ++ D+ +A L
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEE--DVKFYLAELALAL 139
Query: 858 HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEY 916
H H +I+ DLKP N+LLD++ L+DFG+SK + D + + T YMAPE
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEV 197
Query: 917 GSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ + D +SFG+LM E T +P
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 65/209 (31%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 1337 FSESNLLGTGIFSSVYKATFADGTNA----AIKIFSLQEDRALKSFD-----AECEVMRR 1387
F +LG G F V+ G++A A+K+ + LK D E +++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL---KKATLKVRDRVRTKMERDILVE 82
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEY 1447
+ H + K+ + G LIL ++ G L L S + E + ++A AL++
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDH 141
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTL-ATIGYMAPE 1506
LH S II+ DLKP N+LLD++ L DFG++K + +D K+ + T+ YMAPE
Sbjct: 142 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPE 196
Query: 1507 YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
+ + S D +SFG+LM E LT P
Sbjct: 197 VVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
Score = 73.2 bits (178), Expect = 1e-12, Method: Composition-based stats.
Identities = 63/208 (30%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 746 FSESNLIGAGSFGSVY--------KATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV 797
F ++G GSFG V+ A Y M V +K L++ +++ E ++L V
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKV-LKKATLKVRDRVRT-KMERDILVEV 83
Query: 798 RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYL 857
H +VK+ + G LIL+++ G L L K + ++ D+ +A L
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEE--DVKFYLAELALAL 139
Query: 858 HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEY 916
H H +I+ DLKP N+LLD++ L+DFG+SK + D + + T YMAPE
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEV 197
Query: 917 GSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ + D +SFG+LM E T +P
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 749 SNLIGAGSFGSVYKATL----PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLV 803
+ +IG G FG VY TL ++ A+K N D G + F E +++ H N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 804 KIISSC-SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
++ C + G ++L YM G L ++ + + ++ + + VA ++YL
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 170
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTMTLATF--GYMAPEYGSE 919
+H DL N +LD+ ++DFG+++ + D E T A +MA E
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 230
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
+T DV+SFG+L+ E TR P
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTRGAP 255
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 116/290 (40%), Gaps = 36/290 (12%)
Query: 1340 SNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-----ALKSFDAECEVMRRIRHRNLA 1394
+ ++G G F VY T D I +R + F E +M+ H N+
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 1395 KIVSSC-SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
++ C + G ++L YM G L ++ + + ++ + + VA ++YL S
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 170
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS-----MKQTMTLATIGYMAPEYG 1508
+H DL N +LD+ + DFG+A+ D D +T + +MA E
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMALESL 228
Query: 1509 SEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLS 1568
+T DV+SFG+L+ E +TR P PD T I LL
Sbjct: 229 QTQKFTTKSDVWSFGVLLWELMTRGAP-----------------PYPDVNTFDITVYLLQ 271
Query: 1569 GEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618
G + + C + + LKC E R + + ++ + I + F+
Sbjct: 272 GRR---LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 318
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 749 SNLIGAGSFGSVYKATL----PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLV 803
+ +IG G FG VY TL ++ A+K N D G + F E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 804 KIISSC-SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
++ C + G ++L YM G L ++ + + ++ + + VA ++YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 151
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTMTLATF--GYMAPEYGSE 919
+H DL N +LD+ ++DFG+++ + D E T A +MA E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
+T DV+SFG+L+ E TR P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP 236
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 116/288 (40%), Gaps = 32/288 (11%)
Query: 1340 SNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-----ALKSFDAECEVMRRIRHRNLA 1394
+ ++G G F VY T D I +R + F E +M+ H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 1395 KIVSSC-SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
++ C + G ++L YM G L ++ + + ++ + + VA ++YL S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 151
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL---DGVDSMKQTMTLATIGYMAPEYGSE 1510
+H DL N +LD+ + DFG+A+ + + +T + +MA E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 1511 GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570
+T DV+SFG+L+ E +TR P PD T I LL G
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP-----------------PYPDVNTFDITVYLLQGR 254
Query: 1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618
+ + C + + LKC E R + + ++ + I + F+
Sbjct: 255 R---LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 749 SNLIGAGSFGSVYKATL----PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLV 803
+ +IG G FG VY TL ++ A+K N D G + F E +++ H N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 804 KIISSC-SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
++ C + G ++L YM G L ++ + + ++ + + VA ++YL
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 169
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTMTLATF--GYMAPEYGSE 919
+H DL N +LD+ ++DFG+++ + D E T A +MA E
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
+T DV+SFG+L+ E TR P
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAP 254
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 116/288 (40%), Gaps = 32/288 (11%)
Query: 1340 SNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-----ALKSFDAECEVMRRIRHRNLA 1394
+ ++G G F VY T D I +R + F E +M+ H N+
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 1395 KIVSSC-SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
++ C + G ++L YM G L ++ + + ++ + + VA ++YL S
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 169
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL---DGVDSMKQTMTLATIGYMAPEYGSE 1510
+H DL N +LD+ + DFG+A+ + + +T + +MA E
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 1511 GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570
+T DV+SFG+L+ E +TR P PD T I LL G
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAP-----------------PYPDVNTFDITVYLLQGR 272
Query: 1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618
+ + C + + LKC E R + + ++ + I + F+
Sbjct: 273 R---LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 317
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 109/223 (48%), Gaps = 13/223 (5%)
Query: 751 LIGAGSFGSVY--KATLPYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVKI 805
+IGAG FG V + LP +VA+ + L++ + + F E ++ + H N+V +
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 806 ISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPV 865
+ +++E+M G+L+ +L H + Q + ++ +A+ + YL
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLAD---MGY 166
Query: 866 IHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFG--YMAPEYGSEGIVS 923
+H DL N+L++ + V +SDFG+S++++ + T T + APE +
Sbjct: 167 VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFT 226
Query: 924 TCGDVYSFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
+ DV+S+GI+M E + + P +M + K +EE RL
Sbjct: 227 SASDVWSYGIVMWEVMSYGERPYWDM--SNQDVIKAIEEGYRL 267
Score = 67.8 bits (164), Expect = 5e-11, Method: Composition-based stats.
Identities = 63/281 (22%), Positives = 125/281 (44%), Gaps = 34/281 (12%)
Query: 1342 LLGTGIFSSVY--KATFADGTNAAIKIFSLQ---EDRALKSFDAECEVMRRIRHRNLAKI 1396
++G G F V + + A+ I +L+ ++ + F E +M + H N+ +
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 1397 VSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYL-HQGYSTS 1455
+ +++++M G+L+ +L H+ + Q + ++ +A + YL GY
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGY--- 166
Query: 1456 IIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIG--YMAPEYGSEGIV 1513
+H DL N+L++ ++V + DFG++++++ T T I + APE
Sbjct: 167 -VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKF 225
Query: 1514 STSGDVYSFGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEE 1572
+++ DV+S+GI+M E ++ +P DM + DVI A EE
Sbjct: 226 TSASDVWSYGIVMWEVMSYGERPYWDM-----------------SNQDVIKAI----EEG 264
Query: 1573 ADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKI 1613
+ A C + + L L C ++ ER + + L K+
Sbjct: 265 YRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 44/263 (16%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ AT+ T A+K ++++F AE VM+ ++H L K+ + +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 1403 PGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMID----VACALEYLHQGYSTSIIH 1458
+I ++M +GSL +L S +Q L +ID +A + ++ Q + IH
Sbjct: 249 EPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIH 301
Query: 1459 CDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGD 1518
DL+ +N+L+ +V + DFG+A++ I + APE + G + D
Sbjct: 302 RDLRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFGSFTIKSD 351
Query: 1519 VYSFGILMMETLTR-RKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAA 1577
V+SFGIL+ME +T R P M EV + + E +
Sbjct: 352 VWSFGILLMEIVTYGRIPYPGMSNPEV---------------------IRALERGYRMPR 390
Query: 1578 KKKCMSSVMSLALKCSEEIPEER 1600
+ C + ++ ++C + PEER
Sbjct: 391 PENCPEELYNIMMRCWKNRPEER 413
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 98/192 (51%), Gaps = 20/192 (10%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN 811
+GAG FG V+ AT VA+K ++++F AE V++ ++H LVK+ + +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 812 HGFKALILEYMPQGSLEKWLYSHKYTLN-IQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+I E+M +GSL +L S + + + + +D +A + ++ + IH DL
Sbjct: 249 EPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDL 304
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF--GYMAPEYGSEGIVSTCGDV 928
+ +N+L+ V ++DFG++++ A F + APE + G + DV
Sbjct: 305 RAANILVSASLVCKIADFGLARV------------GAKFPIKWTAPEAINFGSFTIKSDV 352
Query: 929 YSFGILMIETFT 940
+SFGIL++E T
Sbjct: 353 WSFGILLMEIVT 364
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 749 SNLIGAGSFGSVYKATL----PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLV 803
+ +IG G FG VY TL ++ A+K N D G + F E +++ H N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 804 KIISSC-SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
++ C + G ++L YM G L ++ + + ++ + + VA ++YL
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 143
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTMTLATF--GYMAPEYGSE 919
+H DL N +LD+ ++DFG+++ + D E T A +MA E
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 203
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
+T DV+SFG+L+ E TR P
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTRGAP 228
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 116/288 (40%), Gaps = 32/288 (11%)
Query: 1340 SNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-----ALKSFDAECEVMRRIRHRNLA 1394
+ ++G G F VY T D I +R + F E +M+ H N+
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 1395 KIVSSC-SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
++ C + G ++L YM G L ++ + + ++ + + VA ++YL S
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 143
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL---DGVDSMKQTMTLATIGYMAPEYGSE 1510
+H DL N +LD+ + DFG+A+ + + +T + +MA E
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 203
Query: 1511 GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570
+T DV+SFG+L+ E +TR P PD T I LL G
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTRGAP-----------------PYPDVNTFDITVYLLQGR 246
Query: 1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618
+ + C + + LKC E R + + ++ + I + F+
Sbjct: 247 R---LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 291
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 109/224 (48%), Gaps = 13/224 (5%)
Query: 750 NLIGAGSFGSVY--KATLPYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLVK 804
++GAG FG V + LP +++ + L++ + + F E ++ + H N+++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
+ + ++ E M GSL+ +L H + Q + ++ +AS ++YL
Sbjct: 82 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MG 138
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAPEYGSEGIV 922
+H DL N+L++ + V +SDFG+S++L D E + T + +PE +
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 198
Query: 923 STCGDVYSFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
++ DV+S+GI++ E + + P EM + K V+E RL
Sbjct: 199 TSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDEGYRL 240
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 1333 ATNGFSESNLLGTGIFSSV----YKATFADGTNAAIKIFSL-QEDRALKSFDAECEVMRR 1387
ATN S ++G G F V K + AIK + ++ + F E +M +
Sbjct: 15 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEY 1447
H N+ ++ + ++ + M GSL+ +L H+ + Q + ++ +A ++Y
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 1448 LHQ-GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMA 1504
L GY +H DL N+L++ ++V + DFG++++L+ T I + +
Sbjct: 134 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 189
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE + +++ DV+S+GI++ E ++
Sbjct: 190 PEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 749 SNLIGAGSFGSVYKATL----PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLV 803
+ +IG G FG VY TL ++ A+K N D G + F E +++ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 804 KIISSC-SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
++ C + G ++L YM G L ++ + + ++ + + VA ++YL
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 149
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTMTLATF--GYMAPEYGSE 919
+H DL N +LD+ ++DFG+++ + D E T A +MA E
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
+T DV+SFG+L+ E TR P
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAP 234
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 116/288 (40%), Gaps = 32/288 (11%)
Query: 1340 SNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-----ALKSFDAECEVMRRIRHRNLA 1394
+ ++G G F VY T D I +R + F E +M+ H N+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 1395 KIVSSC-SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
++ C + G ++L YM G L ++ + + ++ + + VA ++YL S
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 149
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL---DGVDSMKQTMTLATIGYMAPEYGSE 1510
+H DL N +LD+ + DFG+A+ + + +T + +MA E
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 1511 GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570
+T DV+SFG+L+ E +TR P PD T I LL G
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAP-----------------PYPDVNTFDITVYLLQGR 252
Query: 1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618
+ + C + + LKC E R + + ++ + I + F+
Sbjct: 253 R---LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 297
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 749 SNLIGAGSFGSVYKATL----PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLV 803
+ +IG G FG VY TL ++ A+K N D G + F E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 804 KIISSC-SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
++ C + G ++L YM G L ++ + + ++ + + VA ++YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 151
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTMTLATF--GYMAPEYGSE 919
+H DL N +LD+ ++DFG+++ + D E T A +MA E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
+T DV+SFG+L+ E TR P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP 236
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 117/290 (40%), Gaps = 36/290 (12%)
Query: 1340 SNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-----ALKSFDAECEVMRRIRHRNLA 1394
+ ++G G F VY T D I +R + F E +M+ H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 1395 KIVSSC-SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
++ C + G ++L YM G L ++ + + ++ + + VA ++YL S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 151
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT-----IGYMAPEYG 1508
+H DL N +LD+ + DFG+A+ D D ++ T + +MA E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 1509 SEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLS 1568
+T DV+SFG+L+ E +TR P PD T I LL
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAP-----------------PYPDVNTFDITVYLLQ 252
Query: 1569 GEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618
G + + C + + LKC E R + + ++ + I + F+
Sbjct: 253 GRR---LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 749 SNLIGAGSFGSVYKATL----PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLV 803
+ +IG G FG VY TL ++ A+K N D G + F E +++ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 804 KIISSC-SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
++ C + G ++L YM G L ++ + + ++ + + VA ++YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 150
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTMTLATF--GYMAPEYGSE 919
+H DL N +LD+ ++DFG+++ + D E T A +MA E
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 210
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
+T DV+SFG+L+ E TR P
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAP 235
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 116/288 (40%), Gaps = 32/288 (11%)
Query: 1340 SNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-----ALKSFDAECEVMRRIRHRNLA 1394
+ ++G G F VY T D I +R + F E +M+ H N+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 1395 KIVSSC-SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
++ C + G ++L YM G L ++ + + ++ + + VA ++YL S
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 150
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL---DGVDSMKQTMTLATIGYMAPEYGSE 1510
+H DL N +LD+ + DFG+A+ + + +T + +MA E
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 210
Query: 1511 GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570
+T DV+SFG+L+ E +TR P PD T I LL G
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAP-----------------PYPDVNTFDITVYLLQGR 253
Query: 1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618
+ + C + + LKC E R + + ++ + I + F+
Sbjct: 254 R---LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 298
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 12/205 (5%)
Query: 749 SNLIGAGSFGSVYKATL----PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLV 803
+ +IG G FG VY TL ++ A+K N D G + F E +++ H N++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 804 KIISSC-SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
++ C + G ++L YM G L ++ + + ++ + + VA +++L
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 210
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGE-DSV-TQTMTLATFGYMAPEYGSE 919
+H DL N +LD+ ++DFG+++ + D E DSV +T +MA E
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
+T DV+SFG+L+ E TR P
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTRGAP 295
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 118/288 (40%), Gaps = 32/288 (11%)
Query: 1340 SNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-----ALKSFDAECEVMRRIRHRNLA 1394
+ ++G G F VY T D I +R + F E +M+ H N+
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 1395 KIVSSC-SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
++ C + G ++L YM G L ++ + + ++ + + VA +++L S
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 210
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMK-QTMTLATIGYMAPEYGSE 1510
+H DL N +LD+ + DFG+A+ + DS+ +T + +MA E
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 1511 GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570
+T DV+SFG+L+ E +TR P PD T I LL G
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTRGAP-----------------PYPDVNTFDITVYLLQGR 313
Query: 1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618
+ + C + + LKC E R + + ++ + I + F+
Sbjct: 314 R---LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 12/205 (5%)
Query: 749 SNLIGAGSFGSVYKATL----PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLV 803
+ +IG G FG VY TL ++ A+K N D G + F E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 804 KIISSC-SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
++ C + G ++L YM G L ++ + + ++ + + VA +++L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 151
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGE-DSV-TQTMTLATFGYMAPEYGSE 919
+H DL N +LD+ ++DFG+++ + D E DSV +T +MA E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
+T DV+SFG+L+ E TR P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP 236
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 118/288 (40%), Gaps = 32/288 (11%)
Query: 1340 SNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-----ALKSFDAECEVMRRIRHRNLA 1394
+ ++G G F VY T D I +R + F E +M+ H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 1395 KIVSSC-SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
++ C + G ++L YM G L ++ + + ++ + + VA +++L S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 151
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMK-QTMTLATIGYMAPEYGSE 1510
+H DL N +LD+ + DFG+A+ + DS+ +T + +MA E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 1511 GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570
+T DV+SFG+L+ E +TR P PD T I LL G
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP-----------------PYPDVNTFDITVYLLQGR 254
Query: 1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618
+ + C + + LKC E R + + ++ + I + F+
Sbjct: 255 R---LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 749 SNLIGAGSFGSVYKATL----PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLV 803
+ +IG G FG VY TL ++ A+K N D G + F E +++ H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 804 KIISSC-SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
++ C + G ++L YM G L ++ + + ++ + + VA ++YL
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 148
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTMTLATF--GYMAPEYGSE 919
+H DL N +LD+ ++DFG+++ + D E T A +MA E
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
+T DV+SFG+L+ E TR P
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAP 233
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 116/288 (40%), Gaps = 32/288 (11%)
Query: 1340 SNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-----ALKSFDAECEVMRRIRHRNLA 1394
+ ++G G F VY T D I +R + F E +M+ H N+
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 1395 KIVSSC-SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
++ C + G ++L YM G L ++ + + ++ + + VA ++YL S
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 148
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL---DGVDSMKQTMTLATIGYMAPEYGSE 1510
+H DL N +LD+ + DFG+A+ + + +T + +MA E
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 1511 GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570
+T DV+SFG+L+ E +TR P PD T I LL G
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAP-----------------PYPDVNTFDITVYLLQGR 251
Query: 1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618
+ + C + + LKC E R + + ++ + I + F+
Sbjct: 252 R---LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 296
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 12/205 (5%)
Query: 749 SNLIGAGSFGSVYKATL----PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLV 803
+ +IG G FG VY TL ++ A+K N D G + F E +++ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 804 KIISSC-SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
++ C + G ++L YM G L ++ + + ++ + + VA +++L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 152
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGE-DSV-TQTMTLATFGYMAPEYGSE 919
+H DL N +LD+ ++DFG+++ + D E DSV +T +MA E
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
+T DV+SFG+L+ E TR P
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAP 237
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 118/288 (40%), Gaps = 32/288 (11%)
Query: 1340 SNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-----ALKSFDAECEVMRRIRHRNLA 1394
+ ++G G F VY T D I +R + F E +M+ H N+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 1395 KIVSSC-SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
++ C + G ++L YM G L ++ + + ++ + + VA +++L S
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 152
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMK-QTMTLATIGYMAPEYGSE 1510
+H DL N +LD+ + DFG+A+ + DS+ +T + +MA E
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 1511 GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570
+T DV+SFG+L+ E +TR P PD T I LL G
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAP-----------------PYPDVNTFDITVYLLQGR 255
Query: 1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618
+ + C + + LKC E R + + ++ + I + F+
Sbjct: 256 R---LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 300
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 109/225 (48%), Gaps = 13/225 (5%)
Query: 749 SNLIGAGSFGSVY--KATLPYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLV 803
++GAG FG V + LP +++ + L++ + + F E ++ + H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
++ + ++ E M GSL+ +L H + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAPEYGSEGI 921
+H DL N+L++ + V +SDFG+S++L D E + T + +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 922 VSTCGDVYSFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
++ DV+S+GI++ E + + P EM + K V+E RL
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDEGYRL 269
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 1333 ATNGFSESNLLGTGIFSSV----YKATFADGTNAAIKIFSL-QEDRALKSFDAECEVMRR 1387
ATN S ++G G F V K + AIK + ++ + F E +M +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEY 1447
H N+ ++ + ++ + M GSL+ +L H+ + Q + ++ +A ++Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 1448 LHQ-GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMA 1504
L GY +H DL N+L++ ++V + DFG++++L+ T I + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE + +++ DV+S+GI++ E ++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 12/205 (5%)
Query: 749 SNLIGAGSFGSVYKATL----PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLV 803
+ +IG G FG VY TL ++ A+K N D G + F E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 804 KIISSC-SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
++ C + G ++L YM G L ++ + + ++ + + VA +++L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 151
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGE-DSV-TQTMTLATFGYMAPEYGSE 919
+H DL N +LD+ ++DFG+++ + D E DSV +T +MA E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
+T DV+SFG+L+ E TR P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP 236
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 118/288 (40%), Gaps = 32/288 (11%)
Query: 1340 SNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-----ALKSFDAECEVMRRIRHRNLA 1394
+ ++G G F VY T D I +R + F E +M+ H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 1395 KIVSSC-SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
++ C + G ++L YM G L ++ + + ++ + + VA +++L S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 151
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMK-QTMTLATIGYMAPEYGSE 1510
+H DL N +LD+ + DFG+A+ + DS+ +T + +MA E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 1511 GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570
+T DV+SFG+L+ E +TR P PD T I LL G
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP-----------------PYPDVNTFDITVYLLQGR 254
Query: 1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618
+ + C + + LKC E R + + ++ + I + F+
Sbjct: 255 R---LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 749 SNLIGAGSFGSVYKATL----PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLV 803
+ +IG G FG VY TL ++ A+K N D G + F E +++ H N++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 804 KIISSC-SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
++ C + G ++L YM G L ++ + + ++ + + VA ++YL
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 146
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTMTLATF--GYMAPEYGSE 919
+H DL N +LD+ ++DFG+++ + D E T A +MA E
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
+T DV+SFG+L+ E TR P
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAP 231
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 116/288 (40%), Gaps = 32/288 (11%)
Query: 1340 SNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-----ALKSFDAECEVMRRIRHRNLA 1394
+ ++G G F VY T D I +R + F E +M+ H N+
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 1395 KIVSSC-SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
++ C + G ++L YM G L ++ + + ++ + + VA ++YL S
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 146
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL---DGVDSMKQTMTLATIGYMAPEYGSE 1510
+H DL N +LD+ + DFG+A+ + + +T + +MA E
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 1511 GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570
+T DV+SFG+L+ E +TR P PD T I LL G
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAP-----------------PYPDVNTFDITVYLLQGR 249
Query: 1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618
+ + C + + LKC E R + + ++ + I + F+
Sbjct: 250 R---LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 12/205 (5%)
Query: 749 SNLIGAGSFGSVYKATL----PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLV 803
+ +IG G FG VY TL ++ A+K N D G + F E +++ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 804 KIISSC-SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
++ C + G ++L YM G L ++ + + ++ + + VA +++L
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 149
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGE-DSV-TQTMTLATFGYMAPEYGSE 919
+H DL N +LD+ ++DFG+++ + D E DSV +T +MA E
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
+T DV+SFG+L+ E TR P
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAP 234
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 118/288 (40%), Gaps = 32/288 (11%)
Query: 1340 SNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-----ALKSFDAECEVMRRIRHRNLA 1394
+ ++G G F VY T D I +R + F E +M+ H N+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 1395 KIVSSC-SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
++ C + G ++L YM G L ++ + + ++ + + VA +++L S
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 149
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMK-QTMTLATIGYMAPEYGSE 1510
+H DL N +LD+ + DFG+A+ + DS+ +T + +MA E
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 1511 GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570
+T DV+SFG+L+ E +TR P PD T I LL G
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAP-----------------PYPDVNTFDITVYLLQGR 252
Query: 1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618
+ + C + + LKC E R + + ++ + I + F+
Sbjct: 253 R---LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 297
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 12/205 (5%)
Query: 749 SNLIGAGSFGSVYKATL----PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLV 803
+ +IG G FG VY TL ++ A+K N D G + F E +++ H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 804 KIISSC-SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
++ C + G ++L YM G L ++ + + ++ + + VA +++L
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 156
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGE-DSV-TQTMTLATFGYMAPEYGSE 919
+H DL N +LD+ ++DFG+++ + D E DSV +T +MA E
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 216
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
+T DV+SFG+L+ E TR P
Sbjct: 217 QKFTTKSDVWSFGVLLWELMTRGAP 241
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 118/288 (40%), Gaps = 32/288 (11%)
Query: 1340 SNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDR-----ALKSFDAECEVMRRIRHRNLA 1394
+ ++G G F VY T D I +R + F E +M+ H N+
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 1395 KIVSSC-SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
++ C + G ++L YM G L ++ + + ++ + + VA +++L S
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 156
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMK-QTMTLATIGYMAPEYGSE 1510
+H DL N +LD+ + DFG+A+ + DS+ +T + +MA E
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 216
Query: 1511 GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570
+T DV+SFG+L+ E +TR P PD T I LL G
Sbjct: 217 QKFTTKSDVWSFGVLLWELMTRGAP-----------------PYPDVNTFDITVYLLQGR 259
Query: 1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKIKTKFL 1618
+ + C + + LKC E R + + ++ + I + F+
Sbjct: 260 R---LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 304
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 105/243 (43%), Gaps = 14/243 (5%)
Query: 435 LPNSVGNLSKSLEYFYAGSCE-LGGGIPAEFGNLSNIIALSLYQNQLASTIPTTVGKLQN 493
+P+S+ NL L + Y G L G IP L+ + L + ++ IP + +++
Sbjct: 68 IPSSLANLPY-LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 494 LQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNALQNQIP-TCXXXXXXXXXXXXXXXXX 552
L LD SYN + G++P + L +L + GN + IP +
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 553 XXXIPSTFWSLEYILVVDFSLNLLSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLK 612
IP TF +L + VD S N+L G G+ K ++L+ N L+ + +G K
Sbjct: 187 TGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSK 244
Query: 613 DLTYLALARNGFQGSIPEAIGSLISLEK---------GEIPSGGPFVNFTEGSFMQNYAL 663
+L L L N G++P+ + L L GEIP GG F ++ N L
Sbjct: 245 NLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCL 304
Query: 664 CGS 666
CGS
Sbjct: 305 CGS 307
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 107/267 (40%), Gaps = 40/267 (14%)
Query: 999 VNKITGTIPRTVGNLTELRELHLHGNNLEAYLYNNKFTGRIPQNLGNCTLLNFLILRQNQ 1058
+N + G IP + LT+L L++ N+ +G IP L +
Sbjct: 86 INNLVGPIPPAIAKLTQLHYLYITHTNV---------SGAIPDFLS----------QIKT 126
Query: 1059 LTGVRLASNKLIGRIPSMIFNNSNIEAIQLYGNHFSGHLPSSIGPYLPNLQGLILWGNNL 1118
L + + N L G +P I + N+ I GN SG +P S G + + + N L
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 1119 SGIIPSSICNASQVILLGLSENLFSGLIPNTFGNCRQLQILDLSLNHLTTGSSTQGHSFY 1178
+G IP + N + + + LS N+ G FG+ + Q + L+ N L G S
Sbjct: 187 TGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLS-- 243
Query: 1179 TSLTNCRYLRRLVLQNNPLKGALPNSIGNLSTSLEYFFASSTELRGAIPVEFEGEIPSGG 1238
+ L L L+NN + G LP + T L++ + + GEIP GG
Sbjct: 244 ------KNLNGLDLRNNRIYGTLPQGL----TQLKFLHSLNVSFN-----NLCGEIPQGG 288
Query: 1239 PFVNFTAESLMQNLVLGGSSRLQVPPC 1265
F + N L GS +P C
Sbjct: 289 NLQRFDVSAYANNKCLCGSP---LPAC 312
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 101/238 (42%), Gaps = 44/238 (18%)
Query: 273 GRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLP 332
G IP I T L+YL + N++G IP + + + N LSG LP
Sbjct: 91 GPIPPAIAKLTQLHYLYITHT--------NVSGAIPDFLSQIKTLVTLDFSYNALSGTLP 142
Query: 333 SSTGINLPNLLRLYLWGNNLSGVIPSSICNASKL-TVLELSRNLFSGLVANTFGNCRQLQ 391
S +LPNL+ + GN +SG IP S + SKL T + +SRN +G + TF N
Sbjct: 143 PSIS-SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN----- 196
Query: 392 ILNLAYSQLAXXXXXXXXXXXXXXXNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYA 451
LNLA+ L+ +LA SL +
Sbjct: 197 -LNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLA-----------------KNSLAF--- 235
Query: 452 GSCELGGGIPAEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIP 509
+LG + G N+ L L N++ T+P + +L+ L L++S+NN+ G IP
Sbjct: 236 ---DLG-----KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 3/184 (1%)
Query: 94 LSIPNLGLGGTIPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNL 153
L I + + G IP ++ + LV+L+ S N GTLP + +P L I NRISG +
Sbjct: 106 LYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAI 165
Query: 154 FDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELM 213
D + S +S N++TG++P + + + L + +S N L G G+
Sbjct: 166 PDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQ 224
Query: 214 ELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMTTG 273
+++L N+L + + +L + L NN ++G+LP L +L L LN+ G
Sbjct: 225 KIHLAKNSLAFDLGKVGLS-KNLNGLDLRNNRIYGTLPQGL-TQLKFLHSLNVSFNNLCG 282
Query: 274 RIPK 277
IP+
Sbjct: 283 EIPQ 286
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 122/319 (38%), Gaps = 66/319 (20%)
Query: 79 WVGVTCGS--RHGRVTDLSIPNLGLGGT--IPPHVANLSFLVSLNISG-NRFHGTLPNEL 133
W+GV C + + RV +L + L L IP +ANL +L L I G N G +P +
Sbjct: 38 WLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAI 97
Query: 134 WLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSV 193
LT+L ++ ++G +P L L L
Sbjct: 98 A-------------------------KLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDF 132
Query: 194 SFNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVD 253
S+N L+G +P +I +L L+ + +GN + G P + + S LF S+ +
Sbjct: 133 SYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFS----------KLFTSMTIS 182
Query: 254 LCRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFN 313
R TG+IP N L D N L G + +
Sbjct: 183 RNR--------------LTGKIPPTFANLNL---------AFVDLSRNMLEGDASVLFGS 219
Query: 314 NSNIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSR 373
+ N + I L N L+ +L G++ NL L L N + G +P + L L +S
Sbjct: 220 DKNTQKIHLAKNSLAFDL-GKVGLS-KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSF 277
Query: 374 NLFSGLVANTFGNCRQLQI 392
N G + GN ++ +
Sbjct: 278 NNLCGEIPQG-GNLQRFDV 295
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 992 LKRLSISVNKITGTIPRTVGNLTELRELHLHGNNLEAYLYNNKFTGRIPQNLGNCT-LLN 1050
L L S N ++GT+P ++ +L L + G N+ +G IP + G+ + L
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDG---------NRISGAIPDSYGSFSKLFT 177
Query: 1051 FLILRQNQLTG-------------VRLASNKLIGRIPSMIFNNSNIEAIQLYGNHFSGHL 1097
+ + +N+LTG V L+ N L G + ++ N + I L N + L
Sbjct: 178 SMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237
Query: 1098 PSSIGPYLPNLQGLILWGNNLSGIIPSSICNASQVILLGLSENLFSGLIPNTFGNCRQLQ 1157
+G NL GL L N + G +P + + L +S N G IP GN ++
Sbjct: 238 -GKVG-LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFD 294
Query: 1158 ILDLSLNHLTTGS 1170
+ + N GS
Sbjct: 295 VSAYANNKCLCGS 307
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 75.1 bits (183), Expect = 3e-13, Method: Composition-based stats.
Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 17/208 (8%)
Query: 746 FSESNLIGAGSFGSVY---KATLP-----YGMNVAIKVFNLQLDGAIKSFDAECEVLRRV 797
F ++G GSFG V+ K T P Y M V +K L++ +++ E ++L V
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKV-LKKATLKVRDRVRT-KMERDILADV 87
Query: 798 RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYL 857
H +VK+ + G LIL+++ G L L K + ++ D+ +A L
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEE--DVKFYLAELALGL 143
Query: 858 HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAPEY 916
H H +I+ DLKP N+LLD++ L+DFG+SK +D E T YMAPE
Sbjct: 144 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVEYMAPEV 201
Query: 917 GSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ S D +S+G+LM E T +P
Sbjct: 202 VNRQGHSHSADWWSYGVLMFEMLTGSLP 229
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 66/209 (31%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 1337 FSESNLLGTGIFSSVY---KATFAD-GTNAAIKIFSLQEDRALKSFD-----AECEVMRR 1387
F +LG G F V+ K T D G A+K+ + LK D E +++
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVL---KKATLKVRDRVRTKMERDILAD 86
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEY 1447
+ H + K+ + G LIL ++ G L L S + E + ++A L++
Sbjct: 87 VNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALGLDH 145
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTL-ATIGYMAPE 1506
LH S II+ DLKP N+LLD++ L DFG++K + +D K+ + T+ YMAPE
Sbjct: 146 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYSFCGTVEYMAPE 200
Query: 1507 YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
+ S S D +S+G+LM E LT P
Sbjct: 201 VVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 74.3 bits (181), Expect = 5e-13, Method: Composition-based stats.
Identities = 48/193 (24%), Positives = 99/193 (51%), Gaps = 5/193 (2%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSN 1402
LG G F V+ + + T A+K ++++F E +M+ ++H L ++ + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 1403 PGFKALILQYMPQGSLEKWLYS-HNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
+I ++M +GSL +L S + + + +D +A + Y+ + + IH DL
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDL 135
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYS 1521
+ +NVL+ + ++ + DFG+A++++ + + I + APE + G + +V+S
Sbjct: 136 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWS 195
Query: 1522 FGILMMETLTRRK 1534
FGIL+ E +T K
Sbjct: 196 FGILLYEIVTYGK 208
Score = 73.6 bits (179), Expect = 9e-13, Method: Composition-based stats.
Identities = 49/195 (25%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSN 811
+GAG FG V+ VA+K ++++F E +++ ++H LV++ + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 812 HGFKALILEYMPQGSLEKWLYSHKY-TLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+I E+M +GSL +L S + + + + +D +A + Y+ + IH DL
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDL 135
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
+ +NVL+ + + ++DFG++++++ + + + APE + G + +V+S
Sbjct: 136 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWS 195
Query: 931 FGILMIETFTR-KMP 944
FGIL+ E T K+P
Sbjct: 196 FGILLYEIVTYGKIP 210
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated
Protein Kinase Alpha-2 Subunit Mutant (T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 74.3 bits (181), Expect = 5e-13, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 11/218 (5%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALK---SFDAE 1381
S + R+ + + LG G F V G A+KI + Q+ R+L E
Sbjct: 2 SKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKRE 61
Query: 1382 CEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDV 1441
+ ++ RH ++ K+ S P ++++Y+ G L ++ H + +E R + +
Sbjct: 62 IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQI 120
Query: 1442 ACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIG 1501
A++Y H+ ++H DLKP NVLLD M A + DFG++ ++ + ++ + +
Sbjct: 121 LSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRD--SCGSPN 175
Query: 1502 YMAPEYGSEGIVS-TSGDVYSFGILMMETLTRRKPTDD 1538
Y APE S + + D++S G+++ L P DD
Sbjct: 176 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
Score = 72.0 bits (175), Expect = 3e-12, Method: Composition-based stats.
Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 31/213 (14%)
Query: 750 NLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIKSFDA------ECEVLRRVRH 799
+ +G G+FG V ++ T G VA+K+ N Q I+S D E + L+ RH
Sbjct: 17 DTLGVGTFGKVKIGEHQLT---GHKVAVKILNRQ---KIRSLDVVGKIKREIQNLKLFRH 70
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
+++K+ S +++EY+ G L ++ H ++ R + + SA++Y H
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHR 129
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL-DGE---DSVTQTMTLATFGYMAPE 915
V+H DLKP NVLLD A ++DFG+S ++ DGE DS + Y APE
Sbjct: 130 HM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC------GSPNYAAPE 180
Query: 916 YGSEGIVSTCG-DVYSFGILMIETFTRKMPTDE 947
S + + D++S G+++ +P D+
Sbjct: 181 VISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 108/225 (48%), Gaps = 21/225 (9%)
Query: 742 LTDGFSESNLIGAGSFGSVY-KATLPYGMNVAIKVFNLQLDGA-IKSFDAECEVLRRVRH 799
+ D F +G+G+FG V+ G+ IK N ++ +AE EVL+ + H
Sbjct: 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDH 79
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK---YTLNIQQRLDIMIDVASALEY 856
N++KI ++ +++E G L + + S + L+ ++M + +AL Y
Sbjct: 80 PNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAY 139
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAH----LSDFGISKLLDGEDSVTQTMTLATFGYM 912
H H V+H DLKP N+L DT H + DFG+++L ++ T A YM
Sbjct: 140 FHSQH---VVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTAL--YM 193
Query: 913 APEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
APE + C D++S G++M T +P FTG TSL++
Sbjct: 194 APEVFKRDVTFKC-DIWSAGVVMYFLLTGCLP----FTG-TSLEE 232
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 18/199 (9%)
Query: 1343 LGTGIFSSVY-KATFADGTNAAIKIFSLQEDRA---LKSFDAECEVMRRIRHRNLAKIVS 1398
LG+G F V+ + G IK ++ +DR+ ++ +AE EV++ + H N+ KI
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIK--TINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE 87
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYS---HNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ ++++ G L + + S L+ ++M + AL Y H S
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQH 144
Query: 1456 IIHCDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
++H DLKP N+L D + DFG+A+L + T T YMAPE
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMAPEVFKRD- 201
Query: 1513 VSTSGDVYSFGILMMETLT 1531
V+ D++S G++M LT
Sbjct: 202 VTFKCDIWSAGVVMYFLLT 220
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 18/206 (8%)
Query: 1343 LGTGIFSSVYKAT-FADGTNAAIKIFSLQEDRALKSFDAECEVMRRI------RHRNLAK 1395
LG G F V AT + A+K S Q LK D V R I RH ++ K
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQ---LLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ + P ++++Y G L ++ + E R + CA+EY H+
Sbjct: 74 LYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCHR---HK 128
Query: 1456 IIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVS- 1514
I+H DLKP N+LLDD++ + DFG++ ++ + +K + + Y APE + + +
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLK--TSCGSPNYAAPEVINGKLYAG 186
Query: 1515 TSGDVYSFGILMMETLTRRKPTDDMF 1540
DV+S GI++ L R P DD F
Sbjct: 187 PEVDVWSCGIVLYVMLVGRLPFDDEF 212
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV------RHRNLVK 804
+G GSFG V AT VA+K + QL +K D V R + RH +++K
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQL---LKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
+ + +++EY G L ++ K + R + A+EY H
Sbjct: 74 LYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCHRHK--- 128
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVST 924
++H DLKP N+LLDD+ ++DFG+S ++ D + + Y APE + + +
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVINGKLYAG 186
Query: 925 CG-DVYSFGILMIETFTRKMPTDEMF 949
DV+S GI++ ++P D+ F
Sbjct: 187 PEVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein
Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain)
Length = 276
Score = 73.9 bits (180), Expect = 6e-13, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 11/218 (5%)
Query: 1326 SYQELRLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALK---SFDAE 1381
S + R+ + + LG G F V G A+KI + Q+ R+L E
Sbjct: 2 SKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKRE 61
Query: 1382 CEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDV 1441
+ ++ RH ++ K+ S P ++++Y+ G L ++ H + +E R + +
Sbjct: 62 IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQI 120
Query: 1442 ACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIG 1501
A++Y H+ ++H DLKP NVLLD M A + DFG++ ++ + ++ + +
Sbjct: 121 LSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR--TSCGSPN 175
Query: 1502 YMAPEYGSEGIVS-TSGDVYSFGILMMETLTRRKPTDD 1538
Y APE S + + D++S G+++ L P DD
Sbjct: 176 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
Score = 73.2 bits (178), Expect = 1e-12, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 750 NLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIKSFDA------ECEVLRRVRH 799
+ +G G+FG V ++ T G VA+K+ N Q I+S D E + L+ RH
Sbjct: 17 DTLGVGTFGKVKIGEHQLT---GHKVAVKILNRQ---KIRSLDVVGKIKREIQNLKLFRH 70
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
+++K+ S +++EY+ G L ++ H ++ R + + SA++Y H
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHR 129
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL-DGEDSVTQTMTLATFGYMAPEYGS 918
V+H DLKP NVLLD A ++DFG+S ++ DGE T + + Y APE S
Sbjct: 130 HM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT---SCGSPNYAAPEVIS 183
Query: 919 EGIVSTCG-DVYSFGILMIETFTRKMPTDE 947
+ + D++S G+++ +P D+
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 73.9 bits (180), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 7/200 (3%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
++ IG G+ G+VY A + G VAI+ NLQ + E V+R ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
+ S +++EY+ GSL + + ++ Q + + ALE+LH
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSNQ--- 136
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVST 924
VIH D+K N+LL D L+DFG + E S TM + T +MAPE +
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVTRKAYGP 195
Query: 925 CGDVYSFGILMIETFTRKMP 944
D++S GI+ IE + P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 7/200 (3%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++ +G G +VY A A G AI+ +LQ+ + E VMR ++ N+
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ S ++++Y+ GSL + ++ Q + + ALE+LH S
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQ 136
Query: 1456 IIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVST 1515
+IH D+K N+LL D L DFG + S + TM + T +MAPE +
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVTRKAYGP 195
Query: 1516 SGDVYSFGILMMETLTRRKP 1535
D++S GI+ +E + P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 73.9 bits (180), Expect = 7e-13, Method: Composition-based stats.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 736 YQELQRLTDGFSESNLIGAGSFGSVYKATLPYGMN-VAIKVFNLQ-LDGAIKSFDAECEV 793
+++ + + D + +++G G+F V A VAIK + L+G S + E V
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 794 LRRVRHRNLVKIISSCSNHGFKALILEYMPQGSL-EKWLYSHKYTLNIQQRLDIMIDVAS 852
L +++H N+V + + G LI++ + G L ++ + YT RL + V
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--IFQVLD 127
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVL---LDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF 909
A++YLH ++H DLKP N+L LD+D+ +SDFG+SK+ D SV T T
Sbjct: 128 AVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-PGSVLST-ACGTP 182
Query: 910 GYMAPEYGSEGIVSTCGDVYSFGIL 934
GY+APE ++ S D +S G++
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVI 207
Score = 64.3 bits (155), Expect = 6e-10, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 1341 NLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALK----SFDAECEVMRRIRHRNLAKI 1396
++LGTG FS V A D + AL+ S + E V+ +I+H N+ +
Sbjct: 24 DVLGTGAFSEVILAE--DKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 1397 VSSCSNPGFKALILQYMPQGSL-----EKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG 1451
+ G LI+Q + G L EK Y+ ++ V A++YLH
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE------RDASRLIFQVLDAVKYLH-- 133
Query: 1452 YSTSIIHCDLKPSNVL---LDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYG 1508
I+H DLKP N+L LD+D + DFG++K+ D + + T GY+APE
Sbjct: 134 -DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL--STACGTPGYVAPEVL 190
Query: 1509 SEGIVSTSGDVYSFGIL 1525
++ S + D +S G++
Sbjct: 191 AQKPYSKAVDCWSIGVI 207
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 73.9 bits (180), Expect = 7e-13, Method: Composition-based stats.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 736 YQELQRLTDGFSESNLIGAGSFGSVYKATLPYGMN-VAIKVFNLQ-LDGAIKSFDAECEV 793
+++ + + D + +++G G+F V A VAIK + L+G S + E V
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 794 LRRVRHRNLVKIISSCSNHGFKALILEYMPQGSL-EKWLYSHKYTLNIQQRLDIMIDVAS 852
L +++H N+V + + G LI++ + G L ++ + YT RL + V
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--IFQVLD 127
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVL---LDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF 909
A++YLH ++H DLKP N+L LD+D+ +SDFG+SK+ D SV T T
Sbjct: 128 AVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-PGSVLST-ACGTP 182
Query: 910 GYMAPEYGSEGIVSTCGDVYSFGIL 934
GY+APE ++ S D +S G++
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVI 207
Score = 64.3 bits (155), Expect = 6e-10, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 1341 NLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALK----SFDAECEVMRRIRHRNLAKI 1396
++LGTG FS V A D + AL+ S + E V+ +I+H N+ +
Sbjct: 24 DVLGTGAFSEVILAE--DKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 1397 VSSCSNPGFKALILQYMPQGSL-----EKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG 1451
+ G LI+Q + G L EK Y+ ++ V A++YLH
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE------RDASRLIFQVLDAVKYLH-- 133
Query: 1452 YSTSIIHCDLKPSNVL---LDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYG 1508
I+H DLKP N+L LD+D + DFG++K+ D + + T GY+APE
Sbjct: 134 -DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL--STACGTPGYVAPEVL 190
Query: 1509 SEGIVSTSGDVYSFGIL 1525
++ S + D +S G++
Sbjct: 191 AQKPYSKAVDCWSIGVI 207
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 73.9 bits (180), Expect = 7e-13, Method: Composition-based stats.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 736 YQELQRLTDGFSESNLIGAGSFGSVYKATLPYGMN-VAIKVFNLQ-LDGAIKSFDAECEV 793
+++ + + D + +++G G+F V A VAIK + L+G S + E V
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 794 LRRVRHRNLVKIISSCSNHGFKALILEYMPQGSL-EKWLYSHKYTLNIQQRLDIMIDVAS 852
L +++H N+V + + G LI++ + G L ++ + YT RL + V
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--IFQVLD 127
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVL---LDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF 909
A++YLH ++H DLKP N+L LD+D+ +SDFG+SK+ D SV T T
Sbjct: 128 AVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-PGSVLST-ACGTP 182
Query: 910 GYMAPEYGSEGIVSTCGDVYSFGIL 934
GY+APE ++ S D +S G++
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVI 207
Score = 64.3 bits (155), Expect = 6e-10, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 1341 NLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALK----SFDAECEVMRRIRHRNLAKI 1396
++LGTG FS V A D + AL+ S + E V+ +I+H N+ +
Sbjct: 24 DVLGTGAFSEVILAE--DKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 1397 VSSCSNPGFKALILQYMPQGSL-----EKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG 1451
+ G LI+Q + G L EK Y+ ++ V A++YLH
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE------RDASRLIFQVLDAVKYLH-- 133
Query: 1452 YSTSIIHCDLKPSNVL---LDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYG 1508
I+H DLKP N+L LD+D + DFG++K+ D + + T GY+APE
Sbjct: 134 -DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL--STACGTPGYVAPEVL 190
Query: 1509 SEGIVSTSGDVYSFGIL 1525
++ S + D +S G++
Sbjct: 191 AQKPYSKAVDCWSIGVI 207
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 73.9 bits (180), Expect = 7e-13, Method: Composition-based stats.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 736 YQELQRLTDGFSESNLIGAGSFGSVYKATLPYGMN-VAIK-VFNLQLDGAIKSFDAECEV 793
+++ + + D + +++G G+F V A VAIK + L+G S + E V
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 69
Query: 794 LRRVRHRNLVKIISSCSNHGFKALILEYMPQGSL-EKWLYSHKYTLNIQQRLDIMIDVAS 852
L +++H N+V + + G LI++ + G L ++ + YT RL + V
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--IFQVLD 127
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVL---LDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF 909
A++YLH ++H DLKP N+L LD+D+ +SDFG+SK+ D SV T T
Sbjct: 128 AVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-PGSVLST-ACGTP 182
Query: 910 GYMAPEYGSEGIVSTCGDVYSFGIL 934
GY+APE ++ S D +S G++
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVI 207
Score = 65.1 bits (157), Expect = 3e-10, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 25/197 (12%)
Query: 1341 NLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALK----SFDAECEVMRRIRHRNLAKI 1396
++LGTG FS V A D + +AL+ S + E V+ +I+H N+ +
Sbjct: 24 DVLGTGAFSEVILAE--DKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 1397 VSSCSNPGFKALILQYMPQGSL-----EKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG 1451
+ G LI+Q + G L EK Y+ ++ V A++YLH
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE------RDASRLIFQVLDAVKYLH-- 133
Query: 1452 YSTSIIHCDLKPSNVL---LDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYG 1508
I+H DLKP N+L LD+D + DFG++K+ D + + T GY+APE
Sbjct: 134 -DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL--STACGTPGYVAPEVL 190
Query: 1509 SEGIVSTSGDVYSFGIL 1525
++ S + D +S G++
Sbjct: 191 AQKPYSKAVDCWSIGVI 207
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 13/225 (5%)
Query: 749 SNLIGAGSFGSVYKATLP----YGMNVAIKVFNL-QLDGAIKSFDAECEVLRRVRHRNLV 803
+IGAG FG V L + VAIK + + + F E ++ + H N++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
+ + ++ EYM GSL+ +L + + Q + ++ +++ ++YL
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSD---M 143
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAPEYGSEGI 921
+H DL N+L++ + V +SDFG+S++L D E + T + APE +
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRK 203
Query: 922 VSTCGDVYSFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
++ DV+S+GI+M E + + P EM T + +K VEE RL
Sbjct: 204 FTSASDVWSYGIVMWEVVSYGERPYWEM-TNQDVIKA-VEEGYRL 246
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 83/163 (50%), Gaps = 7/163 (4%)
Query: 1372 DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNI 1431
++ + F E +M + H N+ + + ++ +YM GSL+ +L ++ +
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV 123
Query: 1432 EQRLDIMIDVACALEYLHQ-GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
Q + ++ ++ ++YL GY +H DL N+L++ ++V + DFG++++L+
Sbjct: 124 IQLVGMLRGISAGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 179
Query: 1491 MKQTMTLAT--IGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
T I + APE + +++ DV+S+GI+M E ++
Sbjct: 180 AAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 73.6 bits (179), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 13/225 (5%)
Query: 749 SNLIGAGSFGSVYKATL--PYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLV 803
+IG G FG V L P + + + L+ D + F +E ++ + H N++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
+ + +I EYM GSL+ +L + + Q + ++ + S ++YL
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---M 150
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAPEYGSEGI 921
+H DL N+L++ + V +SDFG+S++L D E + T + APE +
Sbjct: 151 SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 210
Query: 922 VSTCGDVYSFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
++ DV+S+GI+M E + + P +M + K +EE RL
Sbjct: 211 FTSASDVWSYGIVMWEVMSYGERPYWDM--SNQDVIKAIEEGYRL 253
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 90/179 (50%), Gaps = 12/179 (6%)
Query: 1372 DRALKSFDAECEVMRRIRHRN---LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL 1428
D+ + F +E +M + H N L +V+ C +I +YM GSL+ +L ++
Sbjct: 71 DKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKP---VMIITEYMENGSLDAFLRKNDGR 127
Query: 1429 LNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV 1488
+ Q + ++ + ++YL S +H DL N+L++ ++V + DFG++++L+
Sbjct: 128 FTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 184
Query: 1489 DSMKQTMTLAT--IGYMAPEYGSEGIVSTSGDVYSFGILMMETLTR-RKPTDDMFTGEV 1544
T I + APE + +++ DV+S+GI+M E ++ +P DM +V
Sbjct: 185 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 243
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 13/225 (5%)
Query: 749 SNLIGAGSFGSVYKATL--PYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLV 803
+IG G FG V L P + + + L+ D + F +E ++ + H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
+ + +I EYM GSL+ +L + + Q + ++ + S ++YL
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---M 135
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAPEYGSEGI 921
+H DL N+L++ + V +SDFG+S++L D E + T + APE +
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 195
Query: 922 VSTCGDVYSFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
++ DV+S+GI+M E + + P +M + K +EE RL
Sbjct: 196 FTSASDVWSYGIVMWEVMSYGERPYWDM--SNQDVIKAIEEGYRL 238
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 88/176 (50%), Gaps = 6/176 (3%)
Query: 1372 DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNI 1431
D+ + F +E +M + H N+ + + +I +YM GSL+ +L ++ +
Sbjct: 56 DKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV 115
Query: 1432 EQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491
Q + ++ + ++YL S +H DL N+L++ ++V + DFG++++L+
Sbjct: 116 IQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 172
Query: 1492 KQTMTLAT--IGYMAPEYGSEGIVSTSGDVYSFGILMMETLTR-RKPTDDMFTGEV 1544
T I + APE + +++ DV+S+GI+M E ++ +P DM +V
Sbjct: 173 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 228
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 73.2 bits (178), Expect = 1e-12, Method: Composition-based stats.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 729 ATWRRISYQELQRLTDGFSESNLIGAGSFGSVYKAT-LPYG----MNVAIKVFNLQLDG- 782
A R + EL+R+ ++G+G+FG+VYK +P G + VAIK+ N + G
Sbjct: 30 AQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN-ETTGP 81
Query: 783 -AIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQ 841
A F E ++ + H +LV+++ C + + L+ + MP G L ++++ HK + Q
Sbjct: 82 KANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQ 140
Query: 842 QRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDG-EDSV 900
L+ + +A + YL ++H DL NVL+ ++DFG+++LL+G E
Sbjct: 141 LLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 197
Query: 901 TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+MA E + DV+S+G+ + E T
Sbjct: 198 NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
Score = 72.8 bits (177), Expect = 2e-12, Method: Composition-based stats.
Identities = 65/235 (27%), Positives = 111/235 (47%), Gaps = 19/235 (8%)
Query: 1318 NTAALRRISYQELRLATNGFSESNLLGTGIFSSVYKATFA-DGTNA----AIKIFS-LQE 1371
N A LR + EL+ +LG+G F +VYK + +G AIKI +
Sbjct: 28 NQAQLRILKETELK-------RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG 80
Query: 1372 DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNI 1431
+A F E +M + H +L +++ C +P + L+ Q MP G L ++++ H +
Sbjct: 81 PKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGS 139
Query: 1432 EQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD-S 1490
+ L+ + +A + YL + ++H DL NVL+ + DFG+A+LL+G +
Sbjct: 140 QLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 196
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEV 1544
I +MA E + DV+S+G+ + E +T KP D + T E+
Sbjct: 197 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI 251
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 73.2 bits (178), Expect = 1e-12, Method: Composition-based stats.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 729 ATWRRISYQELQRLTDGFSESNLIGAGSFGSVYKAT-LPYG----MNVAIKVFNLQLDG- 782
A R + EL+R+ ++G+G+FG+VYK +P G + VAIK+ N + G
Sbjct: 7 AQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN-ETTGP 58
Query: 783 -AIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQ 841
A F E ++ + H +LV+++ C + + L+ + MP G L ++++ HK + Q
Sbjct: 59 KANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQ 117
Query: 842 QRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDG-EDSV 900
L+ + +A + YL ++H DL NVL+ ++DFG+++LL+G E
Sbjct: 118 LLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 174
Query: 901 TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+MA E + DV+S+G+ + E T
Sbjct: 175 NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
Score = 72.8 bits (177), Expect = 2e-12, Method: Composition-based stats.
Identities = 65/235 (27%), Positives = 111/235 (47%), Gaps = 19/235 (8%)
Query: 1318 NTAALRRISYQELRLATNGFSESNLLGTGIFSSVYKATFA-DGTNA----AIKIFS-LQE 1371
N A LR + EL+ +LG+G F +VYK + +G AIKI +
Sbjct: 5 NQAQLRILKETELK-------RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG 57
Query: 1372 DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNI 1431
+A F E +M + H +L +++ C +P + L+ Q MP G L ++++ H +
Sbjct: 58 PKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGS 116
Query: 1432 EQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD-S 1490
+ L+ + +A + YL + ++H DL NVL+ + DFG+A+LL+G +
Sbjct: 117 QLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 173
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEV 1544
I +MA E + DV+S+G+ + E +T KP D + T E+
Sbjct: 174 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI 228
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 13/225 (5%)
Query: 749 SNLIGAGSFGSVYKATL--PYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVRHRNLV 803
+IG G FG V L P + + + L+ D + F +E ++ + H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
+ + +I EYM GSL+ +L + + Q + ++ + S ++YL
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---M 129
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAPEYGSEGI 921
+H DL N+L++ + V +SDFG+S++L D E + T + APE +
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 189
Query: 922 VSTCGDVYSFGILMIETFTR-KMPTDEMFTGETSLKKWVEESLRL 965
++ DV+S+GI+M E + + P +M + K +EE RL
Sbjct: 190 FTSASDVWSYGIVMWEVMSYGERPYWDM--SNQDVIKAIEEGYRL 232
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 88/176 (50%), Gaps = 6/176 (3%)
Query: 1372 DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNI 1431
D+ + F +E +M + H N+ + + +I +YM GSL+ +L ++ +
Sbjct: 50 DKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV 109
Query: 1432 EQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491
Q + ++ + ++YL S +H DL N+L++ ++V + DFG++++L+
Sbjct: 110 IQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 166
Query: 1492 KQTMTLAT--IGYMAPEYGSEGIVSTSGDVYSFGILMMETLTR-RKPTDDMFTGEV 1544
T I + APE + +++ DV+S+GI+M E ++ +P DM +V
Sbjct: 167 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 222
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 13/220 (5%)
Query: 1337 FSESNLLGTGIFSSVYKAT-FADGTNAAIK---IFSLQEDRALKSFDAECEVMRRIRHRN 1392
F +G G FS VY+A DG A+K IF L + +A E ++++++ H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACALEYLH 1449
+ K +S ++L+ G L K L+ + + ALE++H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 1450 QGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGS 1509
S ++H D+KP+NV + V LGD G+ + + ++ + T YM+PE
Sbjct: 154 ---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL-VGTPYYMSPERIH 209
Query: 1510 EGIVSTSGDVYSFGILMMETLTRRKP--TDDMFTGEVCLK 1547
E + D++S G L+ E + P D M +C K
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK 249
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 27/231 (11%)
Query: 746 FSESNLIGAGSFGSVYKAT-LPYGMNVAIK---VFNLQLDGAIKSFDAECEVLRRVRHRN 801
F IG G F VY+A L G+ VA+K +F+L A E ++L+++ H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 802 LVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRL-------DIMIDVASAL 854
++K +S ++LE G L + + K Q+RL + + SAL
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKK----QKRLIPERTVWKYFVQLCSAL 149
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAP 914
E H H V+H D+KP+NV + V L D G+ + + + ++ + T YM+P
Sbjct: 150 E---HMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL-VGTPYYMSP 205
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET----SLKKWVEE 961
E E + D++S G L+ E + P F G+ SL K +E+
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEMAALQSP----FYGDKMNLYSLCKKIEQ 252
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 103/232 (44%), Gaps = 38/232 (16%)
Query: 750 NLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRR--VRHRNLVKIIS 807
LIG G +G+VYK +L VA+KVF+ ++F E + R + H N+ + I
Sbjct: 19 ELIGRGRYGAVYKGSLD-ERPVAVKVFSF---ANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 808 -----SCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH--- 859
+ L++EY P GSL K+L H T + + V L YLH
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLH--TSDWVSSCRLAHSVTRGLAYLHTELP 132
Query: 860 --GHPTPVI-HCDLKPSNVLLDDDTVAHLSDFGISKLLD-------GEDSVTQTMTLATF 909
H P I H DL NVL+ +D +SDFG+S L GE+ + T
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTI 192
Query: 910 GYMAPEYGSEGIVSTCG--------DVYSFGILMIETFTRKMPTDEMFTGET 953
YMAPE EG V+ D+Y+ G++ E F R ++F GE+
Sbjct: 193 RYMAPEV-LEGAVNLRDXESALKQVDMYALGLIYWEIFMR---CTDLFPGES 240
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 99/231 (42%), Gaps = 38/231 (16%)
Query: 1341 NLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRR--IRHRNLAKIV- 1397
L+G G + +VYK + D A+K+FS ++F E + R + H N+A+ +
Sbjct: 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 1398 --SSCSNPGFKA--LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLH---- 1449
+ G L+++Y P GSL K+L H RL V L YLH
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRL--AHSVTRGLAYLHTELP 132
Query: 1450 --QGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLD-------GVDSMKQTMTLATI 1500
Y +I H DL NVL+ +D + DFG++ L G + + TI
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTI 192
Query: 1501 GYMAPEYGSEGIVSTSG--------DVYSFGILMMETLTRRKPTDDMFTGE 1543
YMAPE EG V+ D+Y+ G++ E R D+F GE
Sbjct: 193 RYMAPEV-LEGAVNLRDXESALKQVDMYALGLIYWEIFMR---CTDLFPGE 239
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 23/226 (10%)
Query: 745 GFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
++ +IG GSFG V++A L VAIK + D K + E +++R V+H N+V
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIK--KVLQDKRFK--NRELQIMRIVKHPNVVD 96
Query: 805 IISSCSNHG------FKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH 858
+ + ++G F L+LEY+P+ + K + L I + + L L
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLL-IKLYMYQLLRSLA 155
Query: 859 HGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAPE- 915
+ H + H D+KP N+LLD + V L DFG +K L+ GE +V+ + + Y APE
Sbjct: 156 YIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS---XICSRYYRAPEL 212
Query: 916 -YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
+G+ +T D++S G +M E M +F GE+ + + VE
Sbjct: 213 IFGATN-YTTNIDIWSTGCVMAEL----MQGQPLFPGESGIDQLVE 253
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 111/231 (48%), Gaps = 33/231 (14%)
Query: 1336 GFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++ ++G G F V++A + AIK + +D+ K + E ++MR ++H N+
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIK--KVLQDKRFK--NRELQIMRIVKHPNVVD 96
Query: 1396 IVSSCSNPG------FKALILQYMPQGSLEKWLYSHNYLLNIEQRLDI------MIDVAC 1443
+ + + G F L+L+Y+P E + + ++Q + + M +
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVP----ETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGY 1502
+L Y+H S I H D+KP N+LLD V L DFG AK+L + + + Y
Sbjct: 153 SLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL--IAGEPNVSXICSRYY 207
Query: 1503 MAPE--YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE 1551
APE +G+ +T+ D++S G +M E L + +P +F GE + VE
Sbjct: 208 RAPELIFGATN-YTTNIDIWSTGCVMAE-LMQGQP---LFPGESGIDQLVE 253
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFSLQ---EDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+V A A AIKI + ++ + E +VM R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + + L Y G L K++ R ++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-LATIGYMAPEYGSEG 1511
IIH DLKP N+LL++DM + DFG AK+L + + + T Y++PE +E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
Query: 1512 IVSTSGDVYSFGILMME 1528
S S D+++ G ++ +
Sbjct: 210 SASKSSDLWALGCIIYQ 226
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
+ F ++G GSF +V A L AIK+ ++ + + E +V+ R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
VK+ + + L Y G L K++ R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 150
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT-LATFGYMAPEYGS 918
+IH DLKP N+LL++D ++DFG +K+L E + + + T Y++PE +
Sbjct: 151 ---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207
Query: 919 EGIVSTCGDVYSFGILMIE 937
E S D+++ G ++ +
Sbjct: 208 EKSASKSSDLWALGCIIYQ 226
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKS-FDAECEVLRRVRHRN 801
D F + + +GAG+ G V+K + P G+ +A K+ +L++ AI++ E +VL
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 802 LVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRL--DIMIDVASALEYLHH 859
+V + + G ++ +E+M GSL++ L K I +++ + I V L YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 184
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
H ++H D+KPSN+L++ L DFG+S L DS+ + + T YM+PE
Sbjct: 185 KHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSF-VGTRSYMSPERLQG 239
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
S D++S G+ ++E + P
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGRYP 264
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 10/208 (4%)
Query: 1331 RLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKS-FDAECEVMRRI 1388
L + F + + LG G V+K + G A K+ L+ A+++ E +V+
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 123
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRL-DIMIDVACALEY 1447
+ + + G ++ +++M GSL++ L + EQ L + I V L Y
Sbjct: 124 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTY 181
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
L + + I+H D+KPSN+L++ L DFG++ L +DSM + + T YM+PE
Sbjct: 182 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSF-VGTRSYMSPER 236
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKP 1535
S D++S G+ ++E R P
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V ++L A K E V+ V +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI + MP G L ++ HK + Q L+ + +A + YL
Sbjct: 111 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 169
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 170 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 226
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 227 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 263
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 46 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVM 105
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI Q MP G L ++ H + + L+ + +A +
Sbjct: 106 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 164
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 165 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 221
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 222 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 281
Query: 1564 ANLL 1567
++
Sbjct: 282 VYMI 285
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKS-FDAECEVLRRVRHRN 801
D F + + +GAG+ G V+K + P G+ +A K+ +L++ AI++ E +VL
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 802 LVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRL--DIMIDVASALEYLHH 859
+V + + G ++ +E+M GSL++ L K I +++ + I V L YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 141
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
H ++H D+KPSN+L++ L DFG+S L DS+ + + T YM+PE
Sbjct: 142 KHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSF-VGTRSYMSPERLQG 196
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
S D++S G+ ++E + P
Sbjct: 197 THYSVQSDIWSMGLSLVEMAVGRYP 221
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 10/207 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKS-FDAECEVMRRIR 1389
L + F + + LG G V+K + G A K+ L+ A+++ E +V+
Sbjct: 22 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 81
Query: 1390 HRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRL-DIMIDVACALEYL 1448
+ + + G ++ +++M GSL++ L + EQ L + I V L YL
Sbjct: 82 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVSIAVIKGLTYL 139
Query: 1449 HQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYG 1508
+ + I+H D+KPSN+L++ L DFG++ L +DSM + + T YM+PE
Sbjct: 140 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSF-VGTRSYMSPERL 194
Query: 1509 SEGIVSTSGDVYSFGILMMETLTRRKP 1535
S D++S G+ ++E R P
Sbjct: 195 QGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 100/222 (45%), Gaps = 13/222 (5%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECE 792
++ Q + F +G G FG+VY A + A+KV F QL+ G E E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVA 851
+ +RH N++++ + LILEY P+G + K L K + +QR I ++A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTATYITELA 123
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
+AL Y H VIH D+KP N+LL ++DFG S S +T T Y
Sbjct: 124 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDY 177
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ PE + D++S G+L E K P + ET
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 14/239 (5%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECE 1383
++ + A F LG G F +VY A A+K+ F Q ++A E E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVA 1442
+ +RH N+ ++ + LIL+Y P+G + K L + EQR I ++A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKF--DEQRTATYITELA 123
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGY 1502
AL Y H S +IH D+KP N+LL + DFG + S ++T T+ Y
Sbjct: 124 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDY 177
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ PE + D++S G+L E L + P + E + VE + PD VT+
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 72.0 bits (175), Expect = 3e-12, Method: Composition-based stats.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 1342 LLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSC 1400
+LG G F K T + G +K ++ ++F E +VMR + H N+ K +
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
I +Y+ G+L + S + QR+ D+A + YLH S +IIH D
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRD 133
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKLL-------DGVDSMKQ---TMTLATIG---YMAPEY 1507
L N L+ ++ + DFG+A+L+ +G+ S+K+ +G +MAPE
Sbjct: 134 LNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTR 1532
+ DV+SFGI++ E + R
Sbjct: 194 INGRSYDEKVDVFSFGIVLCEIIGR 218
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 746 FSESNLI-----GAGSFGSVYKATLPYGMNVAIKVFNLQLDGAI-KSFDAECEVLRRVRH 799
F S+LI G G FG K T V + ++ D ++F E +V+R + H
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEH 66
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
N++K I I EY+ G+L + S QR+ D+AS + YLH
Sbjct: 67 PNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGE-------------DSVTQTMTL 906
+ +IH DL N L+ ++ ++DFG+++L+ E D + +
Sbjct: 127 MN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183
Query: 907 ATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTR 941
+MAPE + DV+SFGI++ E R
Sbjct: 184 GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 30/188 (15%)
Query: 760 VYKATLPYGMNVAIKVFNL--------QLDGAIKSFDAECEVLRRVR-HRNLVKIISSCS 810
V++AT G A+K+ + QL+ ++ E +LR+V H +++ +I S
Sbjct: 114 VHRAT---GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170
Query: 811 NHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+ F L+ + M +G L +L + K L+ ++ IM + A+ +LH + ++H DL
Sbjct: 171 SSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDL 226
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE------------YGS 918
KP N+LLDD+ LSDFG S L+ + + + T GY+APE YG
Sbjct: 227 KPENILLDDNMQIRLSDFGFSCHLEPGEKLRE--LCGTPGYLAPEILKCSMDETHPGYGK 284
Query: 919 EGIVSTCG 926
E + CG
Sbjct: 285 EVDLWACG 292
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 24/204 (11%)
Query: 1313 ENNLLNTAALRRISYQELRLATNGFSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQE 1371
E+ L + AA + YQ+ + +++G G+ S V + A G A+KI +
Sbjct: 80 EDELPDWAAAKEF-YQK-------YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTA 131
Query: 1372 DR--------ALKSFDAECEVMRRIR-HRNLAKIVSSCSNPGFKALILQYMPQGSLEKWL 1422
+R ++ E ++R++ H ++ ++ S + F L+ M +G L +L
Sbjct: 132 ERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL 191
Query: 1423 YSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIA 1482
L E R IM + A+ +LH + +I+H DLKP N+LLDD+M L DFG +
Sbjct: 192 TEKVALSEKETR-SIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFS 247
Query: 1483 KLLDGVDSMKQTMTLATIGYMAPE 1506
L+ + +++ T GY+APE
Sbjct: 248 CHLEPGEKLRE--LCGTPGYLAPE 269
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKS-FDAECEVLRRVRHRN 801
D F + + +GAG+ G V+K + P G+ +A K+ +L++ AI++ E +VL
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 802 LVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRL--DIMIDVASALEYLHH 859
+V + + G ++ +E+M GSL++ L K I +++ + I V L YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 149
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
H ++H D+KPSN+L++ L DFG+S L DS+ + + T YM+PE
Sbjct: 150 KHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSF-VGTRSYMSPERLQG 204
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
S D++S G+ ++E + P
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGRYP 229
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 10/208 (4%)
Query: 1331 RLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKS-FDAECEVMRRI 1388
L + F + + LG G V+K + G A K+ L+ A+++ E +V+
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 88
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRL-DIMIDVACALEY 1447
+ + + G ++ +++M GSL++ L + EQ L + I V L Y
Sbjct: 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTY 146
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
L + + I+H D+KPSN+L++ L DFG++ L +DSM + + T YM+PE
Sbjct: 147 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSF-VGTRSYMSPER 201
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKP 1535
S D++S G+ ++E R P
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 7/200 (3%)
Query: 746 FSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
++ IG G+ G+VY A + G VAI+ NLQ + E V+R ++ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
+ S +++EY+ GSL + + ++ Q + + ALE+LH
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSNQ--- 137
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVST 924
VIH ++K N+LL D L+DFG + E S TM + T +MAPE +
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVTRKAYGP 196
Query: 925 CGDVYSFGILMIETFTRKMP 944
D++S GI+ IE + P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 7/200 (3%)
Query: 1337 FSESNLLGTGIFSSVYKAT-FADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++ +G G +VY A A G AI+ +LQ+ + E VMR ++ N+
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ S ++++Y+ GSL + ++ Q + + ALE+LH S
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQ 137
Query: 1456 IIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVST 1515
+IH ++K N+LL D L DFG + S + TM + T +MAPE +
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVTRKAYGP 196
Query: 1516 SGDVYSFGILMMETLTRRKP 1535
D++S GI+ +E + P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 7/200 (3%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
++ IG G+ G+VY A + G VAI+ NLQ + E V+R ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
+ S +++EY+ GSL + + ++ Q + + ALE+LH
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSNQ--- 136
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVST 924
VIH D+K N+LL D L+DFG + E S M + T +MAPE +
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM-VGTPYWMAPEVVTRKAYGP 195
Query: 925 CGDVYSFGILMIETFTRKMP 944
D++S GI+ IE + P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 7/200 (3%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++ +G G +VY A A G AI+ +LQ+ + E VMR ++ N+
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ S ++++Y+ GSL + ++ Q + + ALE+LH S
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQ 136
Query: 1456 IIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVST 1515
+IH D+K N+LL D L DFG + S K++ + T +MAPE +
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRSXMVGTPYWMAPEVVTRKAYGP 195
Query: 1516 SGDVYSFGILMMETLTRRKP 1535
D++S GI+ +E + P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 750 NLIGAGSFGSVYKATL--PYGMNVAIKVFNLQ---LDGAIKSFDAECEVLRRVRHRNLVK 804
+IGAG FG V + L P + + L+ + + F +E ++ + H N+++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
+ +N ++ E+M G+L+ +L + + Q + ++ +AS + YL
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE---MS 136
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFG-----YMAPEYGSE 919
+H DL N+L++ + V +SDFG+S+ L+ E+S T T + G + APE +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGLSRFLE-ENSSDPTYTSSLGGKIPIRWTAPEAIAF 195
Query: 920 GIVSTCGDVYSFGILMIETFT 940
++ D +S+GI+M E +
Sbjct: 196 RKFTSASDAWSYGIVMWEVMS 216
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 131/284 (46%), Gaps = 36/284 (12%)
Query: 1341 NLLGTGIFSSVYKATF-ADGTN-AAIKIFSLQ---EDRALKSFDAECEVMRRIRHRNLAK 1395
++G G F V + A G + + I +L+ +R + F +E +M + H N+ +
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ +N ++ ++M G+L+ +L ++ + Q + ++ +A + YL + S
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE---MS 136
Query: 1456 IIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA-----TIGYMAPEYGSE 1510
+H DL N+L++ ++V + DFG+++ L+ +S T T + I + APE +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEE-NSSDPTYTSSLGGKIPIRWTAPEAIAF 195
Query: 1511 GIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSG 1569
+++ D +S+GI+M E ++ +P DM + DVI+A
Sbjct: 196 RKFTSASDAWSYGIVMWEVMSFGERPYWDM-----------------SNQDVINAI---- 234
Query: 1570 EEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKI 1613
E++ + C +S+ L L C ++ R ++ L K+
Sbjct: 235 EQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 7/200 (3%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
++ IG G+ G+VY A + G VAI+ NLQ + E V+R ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
+ S +++EY+ GSL + + ++ Q + + ALE+LH
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSNQ--- 136
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVST 924
VIH D+K N+LL D L+DFG + E S M + T +MAPE +
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEM-VGTPYWMAPEVVTRKAYGP 195
Query: 925 CGDVYSFGILMIETFTRKMP 944
D++S GI+ IE + P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 7/200 (3%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++ +G G +VY A A G AI+ +LQ+ + E VMR ++ N+
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ S ++++Y+ GSL + ++ Q + + ALE+LH S
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQ 136
Query: 1456 IIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVST 1515
+IH D+K N+LL D L DFG + S + M + T +MAPE +
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEM-VGTPYWMAPEVVTRKAYGP 195
Query: 1516 SGDVYSFGILMMETLTRRKP 1535
D++S GI+ +E + P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 118/228 (51%), Gaps = 28/228 (12%)
Query: 746 FSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
++++ +IG GSFG VY+A L G VAIK + D K + E +++R++ H N+V+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 111
Query: 805 IISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
+ + G K L+L+Y+P+ + + K TL + M + +L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y AP
Sbjct: 172 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 225
Query: 915 E--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
E +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 226 ELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 268
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 24/207 (11%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++++ ++G G F VY+A D G AIK + +D+ K + E ++MR++ H N+ +
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 111
Query: 1396 IVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACALE 1446
+ + G K L+L Y+P+ + + L I +L M + +L
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 170
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y AP
Sbjct: 171 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAP 225
Query: 1506 E--YGSEGIVSTSGDVYSFGILMMETL 1530
E +G+ S S DV+S G ++ E L
Sbjct: 226 ELIFGATDYTS-SIDVWSAGCVLAELL 251
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 28/229 (12%)
Query: 745 GFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLV 803
++++ +IG GSFG VY+A L G VAIK + D K + E +++R++ H N+V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIV 77
Query: 804 KIISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALE 855
++ + G K L+L+Y+P+ + + K TL + M + +L
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 856 YLHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMA 913
Y+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y A
Sbjct: 138 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 191
Query: 914 PE--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
PE +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 192 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 235
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 24/208 (11%)
Query: 1336 GFSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLA 1394
++++ ++G G F VY+A D G AIK + +D+ K + E ++MR++ H N+
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIV 77
Query: 1395 KIVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACAL 1445
++ + G K L+L Y+P+ + + L I +L M + +L
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 136
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y A
Sbjct: 137 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRA 191
Query: 1505 PE--YGSEGIVSTSGDVYSFGILMMETL 1530
PE +G+ S S DV+S G ++ E L
Sbjct: 192 PELIFGATDYTS-SIDVWSAGCVLAELL 218
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 28/229 (12%)
Query: 745 GFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLV 803
++++ +IG GSFG VY+A L G VAIK + D K + E +++R++ H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIV 76
Query: 804 KIISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALE 855
++ + G K L+L+Y+P+ + + K TL + M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 856 YLHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMA 913
Y+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y A
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 190
Query: 914 PE--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
PE +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 191 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 234
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 24/208 (11%)
Query: 1336 GFSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLA 1394
++++ ++G G F VY+A D G AIK + +D+ K + E ++MR++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIV 76
Query: 1395 KIVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACAL 1445
++ + G K L+L Y+P+ + + L I +L M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 135
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y A
Sbjct: 136 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRA 190
Query: 1505 PE--YGSEGIVSTSGDVYSFGILMMETL 1530
PE +G+ S S DV+S G ++ E L
Sbjct: 191 PELIFGATDYTS-SIDVWSAGCVLAELL 217
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 7/200 (3%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
++ IG G+ G+VY A + G VAI+ NLQ + E V+R ++ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
+ S +++EY+ GSL + + ++ Q + + ALE+LH
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSNQ--- 137
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVST 924
VIH D+K N+LL D L+DFG + E S M + T +MAPE +
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM-VGTPYWMAPEVVTRKAYGP 196
Query: 925 CGDVYSFGILMIETFTRKMP 944
D++S GI+ IE + P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 7/200 (3%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++ +G G +VY A A G AI+ +LQ+ + E VMR ++ N+
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ S ++++Y+ GSL + ++ Q + + ALE+LH S
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQ 137
Query: 1456 IIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVST 1515
+IH D+K N+LL D L DFG + S K++ + T +MAPE +
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRSXMVGTPYWMAPEVVTRKAYGP 196
Query: 1516 SGDVYSFGILMMETLTRRKP 1535
D++S GI+ +E + P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 28/229 (12%)
Query: 745 GFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLV 803
++++ +IG GSFG VY+A L G VAIK + D K + E +++R++ H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIV 76
Query: 804 KIISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALE 855
++ + G K L+L+Y+P+ + + K TL + M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 856 YLHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMA 913
Y+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y A
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 190
Query: 914 PE--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
PE +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 191 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 234
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 24/208 (11%)
Query: 1336 GFSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLA 1394
++++ ++G G F VY+A D G AIK + +D+ K + E ++MR++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIV 76
Query: 1395 KIVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACAL 1445
++ + G K L+L Y+P+ + + L I +L M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 135
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y A
Sbjct: 136 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRA 190
Query: 1505 PE--YGSEGIVSTSGDVYSFGILMMETL 1530
PE +G+ S S DV+S G ++ E L
Sbjct: 191 PELIFGATDYTS-SIDVWSAGCVLAELL 217
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 14/202 (6%)
Query: 749 SNLIGAGSFGSVYKA--TLPYGMNVAIKVFNLQ---LDGAIKSFDAECEVLRRVRHRNLV 803
+IGAG FG V LP + + + L+ + + F +E ++ + H N++
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
+ + +I E+M GSL+ +L + + Q + ++ +A+ ++YL +
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN-- 155
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFG-----YMAPEYGS 918
+H DL N+L++ + V +SDFG+S+ L+ +D+ T T A G + APE
Sbjct: 156 -YVHRDLAARNILVNSNLVCKVSDFGLSRFLE-DDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 919 EGIVSTCGDVYSFGILMIETFT 940
++ DV+S+GI+M E +
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMS 235
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1372 DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNI 1431
++ + F +E +M + H N+ + + +I ++M GSL+ +L ++ +
Sbjct: 75 EKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV 134
Query: 1432 EQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491
Q + ++ +A ++YL + +H DL N+L++ ++V + DFG+++ L+ D+
Sbjct: 135 IQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED-DTS 190
Query: 1492 KQTMTLA-----TIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTR-RKPTDDMFTGEV 1544
T T A I + APE +++ DV+S+GI+M E ++ +P DM +V
Sbjct: 191 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV 249
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 13/202 (6%)
Query: 1343 LGTGIFSSVYKAT-FADGTNAAIKIF---SLQEDRALKSFDAECEVMRRIRHRNLAKIVS 1398
+GTG F+ V A G AIKI +L D L E E ++ +RH+++ ++
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSD--LPRIKTEIEALKNLRHQHICQLYH 75
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLH-QGYSTSII 1457
++L+Y P G L ++ S + L E R+ + + A+ Y+H QGY+
Sbjct: 76 VLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVHSQGYA---- 130
Query: 1458 HCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE-YGSEGIVSTS 1516
H DLKP N+L D+ L DFG+ G ++ Y APE + + +
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSE 190
Query: 1517 GDVYSFGILMMETLTRRKPTDD 1538
DV+S GIL+ + P DD
Sbjct: 191 ADVWSMGILLYVLMCGFLPFDD 212
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 16/238 (6%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGA-IKSFDAECEVL 794
++ L + IG G F V A + G VAIK+ + G+ + E E L
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL 62
Query: 795 RRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASAL 854
+ +RH+++ ++ ++LEY P G L ++ S + R+ + + SA+
Sbjct: 63 KNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAV 121
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAP 914
Y+H H DLKP N+L D+ L DFG+ G + Y AP
Sbjct: 122 AYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAP 178
Query: 915 E-YGSEGIVSTCGDVYSFGILMIETFTRKMPTDE---------MFTGETSLKKWVEES 962
E + + + DV+S GIL+ +P D+ + G+ + KW+ S
Sbjct: 179 ELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPS 236
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 118/228 (51%), Gaps = 28/228 (12%)
Query: 746 FSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
++++ +IG GSFG VY+A L G VAIK + D K + E +++R++ H N+V+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 89
Query: 805 IISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
+ + G K L+L+Y+P+ + + K TL + M + +L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y AP
Sbjct: 150 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 203
Query: 915 E--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
E +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 204 ELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 246
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 24/207 (11%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++++ ++G G F VY+A D G AIK + +D+ K + E ++MR++ H N+ +
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 89
Query: 1396 IVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACALE 1446
+ + G K L+L Y+P+ + + L I +L M + +L
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 148
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y AP
Sbjct: 149 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAP 203
Query: 1506 E--YGSEGIVSTSGDVYSFGILMMETL 1530
E +G+ S S DV+S G ++ E L
Sbjct: 204 ELIFGATDYTS-SIDVWSAGCVLAELL 229
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 118/228 (51%), Gaps = 28/228 (12%)
Query: 746 FSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
++++ +IG GSFG VY+A L G VAIK + D K + E +++R++ H N+V+
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 115
Query: 805 IISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
+ + G K L+L+Y+P+ + + K TL + M + +L Y
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y AP
Sbjct: 176 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAP 229
Query: 915 E--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
E +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 230 ELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 272
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 109/228 (47%), Gaps = 28/228 (12%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++++ ++G G F VY+A D G AIK + +D+ K + E ++MR++ H N+ +
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 115
Query: 1396 IVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACALE 1446
+ + G K L+L Y+P+ + + L I +L M + +L
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 174
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y AP
Sbjct: 175 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAP 229
Query: 1506 E--YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE 1551
E +G+ S S DV+S G ++ E L + +F G+ + VE
Sbjct: 230 ELIFGATDYTS-SIDVWSAGCVLAELLLGQP----IFPGDSGVDQLVE 272
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 28/229 (12%)
Query: 745 GFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLV 803
++++ +IG GSFG VY+A L G VAIK + D K + E +++R++ H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIV 76
Query: 804 KIISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALE 855
++ + G K L+L+Y+P+ + + K TL + M + +L
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 856 YLHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMA 913
Y+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y A
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 190
Query: 914 PE--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
PE +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 191 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 234
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 24/208 (11%)
Query: 1336 GFSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLA 1394
++++ ++G G F VY+A D G AIK + +D+ K + E ++MR++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIV 76
Query: 1395 KIVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACAL 1445
++ + G K L+L Y+P+ + + L I +L M + +L
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 135
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y A
Sbjct: 136 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRA 190
Query: 1505 PE--YGSEGIVSTSGDVYSFGILMMETL 1530
PE +G+ S S DV+S G ++ E L
Sbjct: 191 PELIFGATDYTS-SIDVWSAGCVLAELL 217
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI++ MP G L ++ HK + Q L+ + +A + YL
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 140 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 233
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI+Q MP G L ++ H + + L+ + +A +
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 134
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 135 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 192 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 251
Query: 1564 ANLL 1567
++
Sbjct: 252 VYMI 255
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKS-FDAECEVLRRVRHRN 801
D F + + +GAG+ G V+K + P G+ +A K+ +L++ AI++ E +VL
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 802 LVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRL--DIMIDVASALEYLHH 859
+V + + G ++ +E+M GSL++ L K I +++ + I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
H ++H D+KPSN+L++ L DFG+S L DS+ + + T YM+PE
Sbjct: 123 KHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSF-VGTRSYMSPERLQG 177
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
S D++S G+ ++E + P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 1330 LRLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKS-FDAECEVMRR 1387
+ L + F + + LG G V+K + G A K+ L+ A+++ E +V+
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRL-DIMIDVACALE 1446
+ + + G ++ +++M GSL++ L + EQ L + I V L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLT 118
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE 1506
YL + + I+H D+KPSN+L++ L DFG++ L +DSM + + T YM+PE
Sbjct: 119 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSF-VGTRSYMSPE 173
Query: 1507 YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
S D++S G+ ++E R P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
Length = 308
Score = 71.6 bits (174), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 23/254 (9%)
Query: 1329 ELRLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFSLQEDRALKS---FDAE 1381
E +A + S LG G F VY K D + I ++ E +++ F E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 1382 CEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS------HNYLL---NIE 1432
VM+ ++ +++ S +I++ M +G L+ +L S +N +L ++
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 1433 QRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492
+ + + ++A + YL+ + +H DL N ++ +D +GDFG+ + + D +
Sbjct: 133 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 189
Query: 1493 QT-MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE 1551
+ L + +M+PE +G+ +T DV+SFG+++ E T + + E L+ +E
Sbjct: 190 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 249
Query: 1552 ESL---PDAVTDVI 1562
L PD D++
Sbjct: 250 GGLLDKPDNCPDML 263
Score = 60.5 bits (145), Expect = 7e-09, Method: Composition-based stats.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 749 SNLIGAGSFGSVYKATLPYGM-------NVAIKVFNLQLDGAIK-SFDAECEVLRRVRHR 800
S +G GSFG VY+ + G+ VAIK N + F E V++
Sbjct: 24 SRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL---------NIQQRLDIMIDVA 851
++V+++ S +I+E M +G L+ +L S + + ++ + + + ++A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFG 910
+ YL+ +H DL N ++ +D + DFG+++ + D + L
Sbjct: 143 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 199
Query: 911 YMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+M+PE +G+ +T DV+SFG+++ E T
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI++ MP G L ++ HK + Q L+ + +A + YL
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 137 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 230
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI+Q MP G L ++ H + + L+ + +A +
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGM 131
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 132 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 189 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 248
Query: 1564 ANLL 1567
++
Sbjct: 249 VYMI 252
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 71.6 bits (174), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 23/254 (9%)
Query: 1329 ELRLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFSLQEDRALKS---FDAE 1381
E +A + S LG G F VY K D + I ++ E +++ F E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 1382 CEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS------HNYLL---NIE 1432
VM+ ++ +++ S +I++ M +G L+ +L S +N +L ++
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 1433 QRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492
+ + + ++A + YL+ + +H DL N ++ +D +GDFG+ + + D +
Sbjct: 124 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 1493 QT-MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE 1551
+ L + +M+PE +G+ +T DV+SFG+++ E T + + E L+ +E
Sbjct: 181 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 240
Query: 1552 ESL---PDAVTDVI 1562
L PD D++
Sbjct: 241 GGLLDKPDNCPDML 254
Score = 60.5 bits (145), Expect = 7e-09, Method: Composition-based stats.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 749 SNLIGAGSFGSVYKATLPYGM-------NVAIKVFNLQLDGAIK-SFDAECEVLRRVRHR 800
S +G GSFG VY+ + G+ VAIK N + F E V++
Sbjct: 15 SRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL---------NIQQRLDIMIDVA 851
++V+++ S +I+E M +G L+ +L S + + ++ + + + ++A
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFG 910
+ YL+ +H DL N ++ +D + DFG+++ + D + L
Sbjct: 134 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 190
Query: 911 YMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+M+PE +G+ +T DV+SFG+++ E T
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 14/219 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRH 799
+ F +G G FG+VY A + A+KV F QL+ G E E+ +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLH 858
N++++ + LILEY P G++ + L K + +QR I ++A+AL Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTATYITELANALSYCH 129
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
VIH D+KP N+LL + ++DFG S S +T T Y+ PE
Sbjct: 130 SKR---VIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIE 183
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ D++S G+L E F MP E T + + ++
Sbjct: 184 GRMHDEKVDLWSLGVLCYE-FLVGMPPFEAHTYQETYRR 221
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 14/224 (6%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECEVMRRIRHRNLAKIVS 1398
LG G F +VY A A+K+ F Q ++A E E+ +RH N+ ++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVACALEYLHQGYSTSII 1457
+ LIL+Y P G++ + L + EQR I ++A AL Y H S +I
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRF--DEQRTATYITELANALSYCH---SKRVI 134
Query: 1458 HCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSG 1517
H D+KP N+LL + + DFG + S ++T T+ Y+ PE +
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 1518 DVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
D++S G+L E L P + E + VE + PD VT+
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTE 235
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 107/233 (45%), Gaps = 45/233 (19%)
Query: 1333 ATNGFSE----SNLLGTGIFSSVYKATFADGT--NAAIKI--------FSLQEDRALKSF 1378
+T+GF E +LG G+ SSV + T A+KI FS +E + L+
Sbjct: 11 STHGFYENYEPKEILGRGV-SSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 69
Query: 1379 D-AECEVMRRIR-HRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQR-- 1434
E +++R++ H N+ ++ + F L+ M +G L +L L E R
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI 129
Query: 1435 LDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQT 1494
+ +++V CAL L +I+H DLKP N+LLDDDM L DFG + LD + +++
Sbjct: 130 MRALLEVICALHKL------NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE- 182
Query: 1495 MTLATIGYMAPE------------YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
T Y+APE YG E D++S G++M L P
Sbjct: 183 -VCGTPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIMYTLLAGSPP 228
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 39/220 (17%)
Query: 743 TDGFSE----SNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFDA-------- 789
T GF E ++G G V + P A+K+ ++ G+ + +
Sbjct: 12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 790 -ECEVLRRVR-HRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIM 847
E ++LR+V H N++++ + + F L+ + M +G L +L + K TL+ ++ IM
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIM 130
Query: 848 IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA 907
+ LE + H ++H DLKP N+LLDDD L+DFG S LD + + +
Sbjct: 131 ---RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE--VCG 185
Query: 908 TFGYMAPE------------YGSEGIVSTCGDVYSFGILM 935
T Y+APE YG E D++S G++M
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIM 219
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 120/229 (52%), Gaps = 30/229 (13%)
Query: 746 FSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSF-DAECEVLRRVRHRNLV 803
++++ +IG GSFG VY+A L G VAIK L G K+F + E +++R++ H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQG--KAFKNRELQIMRKLDHCNIV 76
Query: 804 KIISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALE 855
++ + G K L+L+Y+P+ + + K TL + M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 856 YLHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMA 913
Y+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y A
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 190
Query: 914 PE--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
PE +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 191 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 234
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 24/207 (11%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++++ ++G G F VY+A D G AIK + + +A K + E ++MR++ H N+ +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 1396 IVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACALE 1446
+ + G K L+L Y+P+ + + L I +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y AP
Sbjct: 137 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAP 191
Query: 1506 E--YGSEGIVSTSGDVYSFGILMMETL 1530
E +G+ S S DV+S G ++ E L
Sbjct: 192 ELIFGATDYTS-SIDVWSAGCVLAELL 217
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 118/228 (51%), Gaps = 28/228 (12%)
Query: 746 FSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
++++ +IG GSFG VY+A L G VAIK + D K + E +++R++ H N+V+
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 82
Query: 805 IISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
+ + G K L+L+Y+P+ + + K TL + M + +L Y
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y AP
Sbjct: 143 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAP 196
Query: 915 E--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
E +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 197 ELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 239
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 24/207 (11%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++++ ++G G F VY+A D G AIK + +D+ K + E ++MR++ H N+ +
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 82
Query: 1396 IVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACALE 1446
+ + G K L+L Y+P+ + + L I +L M + +L
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 141
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y AP
Sbjct: 142 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAP 196
Query: 1506 E--YGSEGIVSTSGDVYSFGILMMETL 1530
E +G+ S S DV+S G ++ E L
Sbjct: 197 ELIFGATDYTS-SIDVWSAGCVLAELL 222
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 118/228 (51%), Gaps = 28/228 (12%)
Query: 746 FSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
++++ +IG GSFG VY+A L G VAIK + D K + E +++R++ H N+V+
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 156
Query: 805 IISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
+ + G K L+L+Y+P+ + + K TL + M + +L Y
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y AP
Sbjct: 217 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAP 270
Query: 915 E--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
E +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 271 ELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 313
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 109/228 (47%), Gaps = 28/228 (12%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++++ ++G G F VY+A D G AIK + +D+ K + E ++MR++ H N+ +
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 156
Query: 1396 IVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACALE 1446
+ + G K L+L Y+P+ + + L I +L M + +L
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 215
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y AP
Sbjct: 216 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAP 270
Query: 1506 E--YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE 1551
E +G+ S S DV+S G ++ E L + +F G+ + VE
Sbjct: 271 ELIFGATDYTS-SIDVWSAGCVLAELLLGQP----IFPGDSGVDQLVE 313
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 118/228 (51%), Gaps = 28/228 (12%)
Query: 746 FSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
++++ +IG GSFG VY+A L G VAIK + D K + E +++R++ H N+V+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 89
Query: 805 IISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
+ + G K L+L+Y+P+ + + K TL + M + +L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y AP
Sbjct: 150 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 203
Query: 915 E--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
E +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 204 ELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 246
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 24/207 (11%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++++ ++G G F VY+A D G AIK + +D+ K + E ++MR++ H N+ +
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 89
Query: 1396 IVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACALE 1446
+ + G K L+L Y+P+ + + L I +L M + +L
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 148
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y AP
Sbjct: 149 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAP 203
Query: 1506 E--YGSEGIVSTSGDVYSFGILMMETL 1530
E +G+ S S DV+S G ++ E L
Sbjct: 204 ELIFGATDYTS-SIDVWSAGCVLAELL 229
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKS-FDAECEVLRRVRHRN 801
D F + + +GAG+ G V+K + P G+ +A K+ +L++ AI++ E +VL
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 802 LVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRL--DIMIDVASALEYLHH 859
+V + + G ++ +E+M GSL++ L K I +++ + I V L YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 125
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
H ++H D+KPSN+L++ L DFG+S L E + T YM+PE
Sbjct: 126 KHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE---MANEFVGTRSYMSPERLQG 180
Query: 920 GIVSTCGDVYSFGILMIETFTRKMPTDEM 948
S D++S G+ ++E + P M
Sbjct: 181 THYSVQSDIWSMGLSLVEMAVGRYPRPPM 209
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 14/234 (5%)
Query: 1331 RLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKS-FDAECEVMRRI 1388
L + F + + LG G V+K + G A K+ L+ A+++ E +V+
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRL-DIMIDVACALEY 1447
+ + + G ++ +++M GSL++ L + EQ L + I V L Y
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVSIAVIKGLTY 122
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
L + + I+H D+KPSN+L++ L DFG++ L +D M + T YM+PE
Sbjct: 123 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDEMANEF-VGTRSYMSPER 177
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE---SLPDAV 1558
S D++S G+ ++E R P M E+ L + V E LP AV
Sbjct: 178 LQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFEL-LDYIVNEPPPKLPSAV 230
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI++ MP G L ++ HK + Q L+ + +A + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 139 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 232
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI+Q MP G L ++ H + + L+ + +A +
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 133
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 134 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 250
Query: 1564 ANLL 1567
++
Sbjct: 251 VYMI 254
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKS-FDAECEVLRRVRHRN 801
D F + + +GAG+ G V+K + P G+ +A K+ +L++ AI++ E +VL
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 802 LVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRL--DIMIDVASALEYLHH 859
+V + + G ++ +E+M GSL++ L K I +++ + I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
H ++H D+KPSN+L++ L DFG+S L DS+ + + T YM+PE
Sbjct: 123 KHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSF-VGTRSYMSPERLQG 177
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
S D++S G+ ++E + P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 1330 LRLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKS-FDAECEVMRR 1387
+ L + F + + LG G V+K + G A K+ L+ A+++ E +V+
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRL-DIMIDVACALE 1446
+ + + G ++ +++M GSL++ L + EQ L + I V L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVSIAVIKGLT 118
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE 1506
YL + + I+H D+KPSN+L++ L DFG++ L +DSM + + T YM+PE
Sbjct: 119 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSF-VGTRSYMSPE 173
Query: 1507 YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
S D++S G+ ++E R P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI++ MP G L ++ HK + Q L+ + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 136 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 229
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI+Q MP G L ++ H + + L+ + +A +
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 131 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 247
Query: 1564 ANLL 1567
++
Sbjct: 248 VYMI 251
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 118/228 (51%), Gaps = 28/228 (12%)
Query: 746 FSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
++++ +IG GSFG VY+A L G VAIK + D K + E +++R++ H N+V+
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 81
Query: 805 IISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
+ + G K L+L+Y+P+ + + K TL + M + +L Y
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y AP
Sbjct: 142 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 195
Query: 915 E--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
E +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 196 ELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 238
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 24/207 (11%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++++ ++G G F VY+A D G AIK + +D+ K + E ++MR++ H N+ +
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 81
Query: 1396 IVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACALE 1446
+ + G K L+L Y+P+ + + L I +L M + +L
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 140
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y AP
Sbjct: 141 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAP 195
Query: 1506 E--YGSEGIVSTSGDVYSFGILMMETL 1530
E +G+ S S DV+S G ++ E L
Sbjct: 196 ELIFGATDYTS-SIDVWSAGCVLAELL 221
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 750 NLIGAGSFGSVYKATL--PYGMNVAIKVFNLQ---LDGAIKSFDAECEVLRRVRHRNLVK 804
+IGAG FG V + L P + + L+ + + F +E ++ + H N+++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
+ +N ++ E+M G+L+ +L + + Q + ++ +AS + YL
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE---MS 138
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFG-----YMAPEYGSE 919
+H DL N+L++ + V +SDFG+S+ L+ E+S T T + G + APE +
Sbjct: 139 YVHRDLAARNILVNSNLVCKVSDFGLSRFLE-ENSSDPTETSSLGGKIPIRWTAPEAIAF 197
Query: 920 GIVSTCGDVYSFGILMIETFT 940
++ D +S+GI+M E +
Sbjct: 198 RKFTSASDAWSYGIVMWEVMS 218
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 131/283 (46%), Gaps = 34/283 (12%)
Query: 1341 NLLGTGIFSSVYKATF-ADGTNAA-IKIFSLQ---EDRALKSFDAECEVMRRIRHRNLAK 1395
++G G F V + A G + + I +L+ +R + F +E +M + H N+ +
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ +N ++ ++M G+L+ +L ++ + Q + ++ +A + YL + S
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE---MS 138
Query: 1456 IIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS-MKQTMTLA---TIGYMAPEYGSEG 1511
+H DL N+L++ ++V + DFG+++ L+ S +T +L I + APE +
Sbjct: 139 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFR 198
Query: 1512 IVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGE 1570
+++ D +S+GI+M E ++ +P DM + DVI+A E
Sbjct: 199 KFTSASDAWSYGIVMWEVMSFGERPYWDM-----------------SNQDVINAI----E 237
Query: 1571 EEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALANLKKI 1613
++ + C +S+ L L C ++ R ++ L K+
Sbjct: 238 QDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 118/228 (51%), Gaps = 28/228 (12%)
Query: 746 FSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
++++ +IG GSFG VY+A L G VAIK + D K + E +++R++ H N+V+
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 85
Query: 805 IISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
+ + G K L+L+Y+P+ + + K TL + M + +L Y
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y AP
Sbjct: 146 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 199
Query: 915 E--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
E +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 200 ELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 242
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 24/207 (11%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++++ ++G G F VY+A D G AIK + +D+ K + E ++MR++ H N+ +
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 85
Query: 1396 IVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACALE 1446
+ + G K L+L Y+P+ + + L I +L M + +L
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 144
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y AP
Sbjct: 145 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAP 199
Query: 1506 E--YGSEGIVSTSGDVYSFGILMMETL 1530
E +G+ S S DV+S G ++ E L
Sbjct: 200 ELIFGATDYTS-SIDVWSAGCVLAELL 225
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI++ MP G L ++ HK + Q L+ + +A + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 138 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 231
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI+Q MP G L ++ H + + L+ + +A +
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 132
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 133 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 249
Query: 1564 ANLL 1567
++
Sbjct: 250 VYMI 253
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 28/229 (12%)
Query: 745 GFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLV 803
++++ +IG GSFG VY+A L G VAIK + D K + E +++R++ H N+V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIV 95
Query: 804 KIISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALE 855
++ + G K L+L+Y+P+ + + K TL + M + +L
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 856 YLHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMA 913
Y+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y A
Sbjct: 156 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 209
Query: 914 PE--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
PE +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 210 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 253
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 24/208 (11%)
Query: 1336 GFSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLA 1394
++++ ++G G F VY+A D G AIK + +D+ K + E ++MR++ H N+
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIV 95
Query: 1395 KIVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACAL 1445
++ + G K L+L Y+P+ + + L I +L M + +L
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 154
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y A
Sbjct: 155 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRA 209
Query: 1505 PE--YGSEGIVSTSGDVYSFGILMMETL 1530
PE +G+ S S DV+S G ++ E L
Sbjct: 210 PELIFGATDYTS-SIDVWSAGCVLAELL 236
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI++ MP G L ++ HK + Q L+ + +A + YL
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 137 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 230
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI+Q MP G L ++ H + + L+ + +A +
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 131
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 132 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 189 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 248
Query: 1564 ANLL 1567
++
Sbjct: 249 VYMI 252
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKS-FDAECEVLRRVRHRN 801
D F + + +GAG+ G V+K + P G+ +A K+ +L++ AI++ E +VL
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 802 LVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRL--DIMIDVASALEYLHH 859
+V + + G ++ +E+M GSL++ L K I +++ + I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
H ++H D+KPSN+L++ L DFG+S L DS+ + + T YM+PE
Sbjct: 123 KHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSF-VGTRSYMSPERLQG 177
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
S D++S G+ ++E + P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 1330 LRLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKS-FDAECEVMRR 1387
+ L + F + + LG G V+K + G A K+ L+ A+++ E +V+
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRL-DIMIDVACALE 1446
+ + + G ++ +++M GSL++ L + EQ L + I V L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVSIAVIKGLT 118
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE 1506
YL + + I+H D+KPSN+L++ L DFG++ L +DSM + + T YM+PE
Sbjct: 119 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSF-VGTRSYMSPE 173
Query: 1507 YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
S D++S G+ ++E R P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 118/228 (51%), Gaps = 28/228 (12%)
Query: 746 FSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
++++ +IG GSFG VY+A L G VAIK + D K + E +++R++ H N+V+
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 113
Query: 805 IISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
+ + G K L+L+Y+P+ + + K TL + M + +L Y
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y AP
Sbjct: 174 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAP 227
Query: 915 E--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
E +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 228 ELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 270
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 24/207 (11%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++++ ++G G F VY+A D G AIK + +D+ K + E ++MR++ H N+ +
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 113
Query: 1396 IVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACALE 1446
+ + G K L+L Y+P+ + + L I +L M + +L
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 172
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y AP
Sbjct: 173 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAP 227
Query: 1506 E--YGSEGIVSTSGDVYSFGILMMETL 1530
E +G+ S S DV+S G ++ E L
Sbjct: 228 ELIFGATDYTS-SIDVWSAGCVLAELL 253
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 71.6 bits (174), Expect = 4e-12, Method: Composition-based stats.
Identities = 69/224 (30%), Positives = 118/224 (52%), Gaps = 37/224 (16%)
Query: 727 SLATWRRISYQELQRLTDGFSESNLIGAGSFGSVY----KATLPYGMNVAIKVFNLQ-LD 781
S ++W++ + ++++++ + F E+ +G G+F V KAT G A+K + L
Sbjct: 9 SSSSWKKQA-EDIKKIFE-FKET--LGTGAFSEVVLAEEKAT---GKLFAVKCIPKKALK 61
Query: 782 GAIKSFDAECEVLRRVRHRNLVKI--ISSCSNHGFKALILEYMPQGSL-----EKWLYSH 834
G S + E VLR+++H N+V + I NH + L+++ + G L EK Y+
Sbjct: 62 GKESSIENEIAVLRKIKHENIVALEDIYESPNHLY--LVMQLVSGGELFDRIVEKGFYTE 119
Query: 835 K-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLL---DDDTVAHLSDFGI 890
K + I+Q LD A+ YLH ++H DLKP N+L D+++ +SDFG+
Sbjct: 120 KDASTLIRQVLD-------AVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGL 169
Query: 891 SKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGIL 934
SK ++G+ V T T GY+APE ++ S D +S G++
Sbjct: 170 SK-MEGKGDVMST-ACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
Score = 70.9 bits (172), Expect = 6e-12, Method: Composition-based stats.
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 31/204 (15%)
Query: 1337 FSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQ--EDRALK----SFDAECEVMRRIRH 1390
F LGTG FS V A A K+F+++ +ALK S + E V+R+I+H
Sbjct: 24 FEFKETLGTGAFSEVVLAE----EKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKH 79
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSL-----EKWLYSHNYLLN-IEQRLDIMIDVACA 1444
N+ + +P L++Q + G L EK Y+ I Q LD A
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD-------A 132
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIG 1501
+ YLH+ I+H DLKP N+L D++ + DFG++K+ D M + T G
Sbjct: 133 VYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVM--STACGTPG 187
Query: 1502 YMAPEYGSEGIVSTSGDVYSFGIL 1525
Y+APE ++ S + D +S G++
Sbjct: 188 YVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 120/229 (52%), Gaps = 30/229 (13%)
Query: 746 FSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSF-DAECEVLRRVRHRNLV 803
++++ +IG GSFG VY+A L G VAIK L G K+F + E +++R++ H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQG--KAFKNRELQIMRKLDHCNIV 76
Query: 804 KIISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALE 855
++ + G K L+L+Y+P+ + + K TL + M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 856 YLHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMA 913
Y+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y A
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 190
Query: 914 PE--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
PE +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 191 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 234
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 24/207 (11%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++++ ++G G F VY+A D G AIK + + +A K + E ++MR++ H N+ +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 1396 IVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACALE 1446
+ + G K L+L Y+P+ + + L I +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y AP
Sbjct: 137 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAP 191
Query: 1506 E--YGSEGIVSTSGDVYSFGILMMETL 1530
E +G+ S S DV+S G ++ E L
Sbjct: 192 ELIFGATDYTS-SIDVWSAGCVLAELL 217
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKS-FDAECEVLRRVRHRN 801
D F + + +GAG+ G V+K + P G+ +A K+ +L++ AI++ E +VL
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 802 LVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRL--DIMIDVASALEYLHH 859
+V + + G ++ +E+M GSL++ L K I +++ + I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
H ++H D+KPSN+L++ L DFG+S L DS+ + + T YM+PE
Sbjct: 123 KHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSF-VGTRSYMSPERLQG 177
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
S D++S G+ ++E + P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 1330 LRLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKS-FDAECEVMRR 1387
+ L + F + + LG G V+K + G A K+ L+ A+++ E +V+
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRL-DIMIDVACALE 1446
+ + + G ++ +++M GSL++ L + EQ L + I V L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVSIAVIKGLT 118
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE 1506
YL + + I+H D+KPSN+L++ L DFG++ L +DSM + + T YM+PE
Sbjct: 119 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSF-VGTRSYMSPE 173
Query: 1507 YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
S D++S G+ ++E R P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKS-FDAECEVLRRVRHRN 801
D F + + +GAG+ G V+K + P G+ +A K+ +L++ AI++ E +VL
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 802 LVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRL--DIMIDVASALEYLHH 859
+V + + G ++ +E+M GSL++ L K I +++ + I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
H ++H D+KPSN+L++ L DFG+S L DS+ + + T YM+PE
Sbjct: 123 KHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSF-VGTRSYMSPERLQG 177
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
S D++S G+ ++E + P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 1330 LRLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKS-FDAECEVMRR 1387
+ L + F + + LG G V+K + G A K+ L+ A+++ E +V+
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRL-DIMIDVACALE 1446
+ + + G ++ +++M GSL++ L + EQ L + I V L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVSIAVIKGLT 118
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE 1506
YL + + I+H D+KPSN+L++ L DFG++ L +DSM + + T YM+PE
Sbjct: 119 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSF-VGTRSYMSPE 173
Query: 1507 YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
S D++S G+ ++E R P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 71.2 bits (173), Expect = 4e-12, Method: Composition-based stats.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 13/206 (6%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+V A A AIKI + ++ + E +VM R+ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + + L Y G L K++ R ++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 147
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIG---YMAPEYGS 1509
IIH DLKP N+LL++DM + DFG AK+L KQ A +G Y++PE +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS--PESKQARANAFVGTAQYVSPELLT 205
Query: 1510 EGIVSTSGDVYSFGILMMETLTRRKP 1535
E S D+++ G ++ + + P
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPP 231
Score = 64.3 bits (155), Expect = 6e-10, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
+ F ++G GSF +V A L AIK+ ++ + + E +V+ R+ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
VK+ + + L Y G L K++ R ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 148
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT-LATFGYMAPEYGS 918
+IH DLKP N+LL++D ++DFG +K+L E + + T Y++PE +
Sbjct: 149 ---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 919 EGIVSTCGDVYSFGILMIE 937
E D+++ G ++ +
Sbjct: 206 EKSACKSSDLWALGCIIYQ 224
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 28/229 (12%)
Query: 745 GFSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLV 803
++++ +IG GSFG VY+A L G VAIK + D K + E +++R++ H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIV 76
Query: 804 KIISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALE 855
++ + G K L+L+Y+P+ + + K TL + M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 856 YLHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMA 913
Y+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y A
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 190
Query: 914 PE--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
PE +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 191 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 234
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 24/208 (11%)
Query: 1336 GFSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLA 1394
++++ ++G G F VY+A D G AIK + +D+ K + E ++MR++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIV 76
Query: 1395 KIVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACAL 1445
++ + G K L+L Y+P+ + + L I +L M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 135
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y A
Sbjct: 136 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRA 190
Query: 1505 PE--YGSEGIVSTSGDVYSFGILMMETL 1530
PE +G+ S S DV+S G ++ E L
Sbjct: 191 PELIFGATDYTS-SIDVWSAGCVLAELL 217
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 118/228 (51%), Gaps = 28/228 (12%)
Query: 746 FSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
++++ +IG GSFG VY+A L G VAIK + D K + E +++R++ H N+V+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 111
Query: 805 IISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
+ + G K L+L+Y+P+ + + K TL + M + +L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y AP
Sbjct: 172 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAP 225
Query: 915 E--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
E +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 226 ELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 268
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 24/207 (11%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++++ ++G G F VY+A D G AIK + +D+ K + E ++MR++ H N+ +
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 111
Query: 1396 IVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACALE 1446
+ + G K L+L Y+P+ + + L I +L M + +L
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 170
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y AP
Sbjct: 171 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAP 225
Query: 1506 E--YGSEGIVSTSGDVYSFGILMMETL 1530
E +G+ S S DV+S G ++ E L
Sbjct: 226 ELIFGATDYTS-SIDVWSAGCVLAELL 251
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 116/244 (47%), Gaps = 28/244 (11%)
Query: 1337 FSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDA-------ECEVMRRIR 1389
+ + + LG G F++VYKA TN + I ++ ++ D E ++++ +
Sbjct: 12 YEKLDFLGEGQFATVYKAR-DKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 1390 HRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLH 1449
H N+ ++ + + +L+ +M + LE + ++ +L M+ LEYLH
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 1450 QGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--Y 1507
Q + I+H DLKP+N+LLD++ V L DFG+AK G + + T Y APE +
Sbjct: 130 QHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF-GSPNRAYXHQVVTRWYRAPELLF 185
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRK--PTD---DMFT------GEVCLKHWVEE-SLP 1555
G+ + D+++ G ++ E L R P D D T G + W + SLP
Sbjct: 186 GAR-MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP 244
Query: 1556 DAVT 1559
D VT
Sbjct: 245 DYVT 248
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 14/204 (6%)
Query: 746 FSESNLIGAGSFGSVYKATLP-YGMNVAIKVFNL-----QLDGAIKSFDAECEVLRRVRH 799
+ + + +G G F +VYKA VAIK L DG ++ E ++L+ + H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
N++ ++ + + +L+ ++M + LE + + L M+ LEYLH
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
++H DLKP+N+LLD++ V L+DFG++K G + + T Y APE +G
Sbjct: 131 HW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF-GSPNRAYXHQVVTRWYRAPELLFG 186
Query: 918 SEGIVSTCGDVYSFGILMIETFTR 941
+ + D+++ G ++ E R
Sbjct: 187 AR-MYGVGVDMWAVGCILAELLLR 209
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 118/228 (51%), Gaps = 28/228 (12%)
Query: 746 FSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
++++ +IG GSFG VY+A L G VAIK + D K + E +++R++ H N+V+
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 105
Query: 805 IISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
+ + G K L+L+Y+P+ + + K TL + M + +L Y
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y AP
Sbjct: 166 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAP 219
Query: 915 E--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
E +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 220 ELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 262
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 24/207 (11%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++++ ++G G F VY+A D G AIK + +D+ K + E ++MR++ H N+ +
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 105
Query: 1396 IVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACALE 1446
+ + G K L+L Y+P+ + + L I +L M + +L
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 164
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y AP
Sbjct: 165 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAP 219
Query: 1506 E--YGSEGIVSTSGDVYSFGILMMETL 1530
E +G+ S S DV+S G ++ E L
Sbjct: 220 ELIFGATDYTS-SIDVWSAGCVLAELL 245
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 118/228 (51%), Gaps = 28/228 (12%)
Query: 746 FSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
++++ +IG GSFG VY+A L G VAIK + D K + E +++R++ H N+V+
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 90
Query: 805 IISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
+ + G K L+L+Y+P+ + + K TL + M + +L Y
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y AP
Sbjct: 151 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAP 204
Query: 915 E--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
E +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 205 ELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 247
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 24/207 (11%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++++ ++G G F VY+A D G AIK + +D+ K + E ++MR++ H N+ +
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 90
Query: 1396 IVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACALE 1446
+ + G K L+L Y+P+ + + L I +L M + +L
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 149
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y AP
Sbjct: 150 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAP 204
Query: 1506 E--YGSEGIVSTSGDVYSFGILMMETL 1530
E +G+ S S DV+S G ++ E L
Sbjct: 205 ELIFGATDYTS-SIDVWSAGCVLAELL 230
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 7/194 (3%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G GS+GSVYKA G VAIK ++ D ++ E ++++ ++VK S
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 811 NHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+ +++EY GS+ + TL + I+ LEYLH IH D+
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDI 151
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
K N+LL+ + A L+DFG++ L + + + T +MAPE E + D++S
Sbjct: 152 KAGNILLNTEGHAKLADFGVAGQL-TDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWS 210
Query: 931 FGILMIETFTRKMP 944
GI IE K P
Sbjct: 211 LGITAIEMAEGKPP 224
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 1343 LGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
LG G + SVYKA + G AIK ++ D L+ E +M++ ++ K S
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 1402 NPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
++++Y GS+ + N L ++ I+ LEYLH IH D+
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDI 151
Query: 1462 KPSNVLLDDDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEGIVSTSGDVY 1520
K N+LL+ + A L DFG+A L D M K+ + T +MAPE E + D++
Sbjct: 152 KAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIW 209
Query: 1521 SFGILMMETLTRRKPTDDM 1539
S GI +E + P D+
Sbjct: 210 SLGITAIEMAEGKPPYADI 228
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 39/231 (16%)
Query: 746 FSESNLI-----GAGSFGSVYKATLPY------GMNVAIKVFNLQLDGA-IKSFDAECEV 793
F NL+ G G FG V KAT + VA+K+ + ++ +E V
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 794 LRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWL---------------------- 831
L++V H +++K+ +CS G LI+EY GSL +L
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 832 -YSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGI 890
+ + L + + ++ ++YL ++H DL N+L+ + +SDFG+
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 891 SKLLDGEDS-VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
S+ + EDS V ++ +MA E + I +T DV+SFG+L+ E T
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 32/219 (14%)
Query: 1343 LGTGIFSSVYKATF------ADGTNAAIKIFSLQEDRA---LKSFDAECEVMRRIRHRNL 1393
LG G F V KAT A T A+K+ L+E+ + L+ +E V++++ H ++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKM--LKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHN-----YLL-----------NIEQRLDI 1437
K+ +CS G LI++Y GSL +L YL + ++R
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 1438 MIDVACALEYLHQGY----STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS-MK 1492
M D+ + QG S++H DL N+L+ + + DFG+++ + DS +K
Sbjct: 149 MGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVK 208
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
++ + +MA E + I +T DV+SFG+L+ E +T
Sbjct: 209 RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 12/226 (5%)
Query: 1311 PTENNLLNTAALRRISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIF--- 1367
PT NL A+ S ++ + +G G F V++ + N A+ +
Sbjct: 15 PTTENLYFQGAMGS-STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKT 73
Query: 1368 --SLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS-NPGFKALILQYMPQGSLEKWLYS 1424
+ D + F E MR+ H ++ K++ + NP + +I++ G L +L
Sbjct: 74 CKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQV 131
Query: 1425 HNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKL 1484
Y L++ + ++ AL YL S +H D+ NVL+ + LGDFG+++
Sbjct: 132 RKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 188
Query: 1485 LDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETL 1530
++ K + I +MAPE + +++ DV+ FG+ M E L
Sbjct: 189 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 9/191 (4%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVF-----NLQLDGAIKSFDAECEVLRRVRHRNLVKII 806
IG G FG V++ N A+ V N D + F E +R+ H ++VK+I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 807 SSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVI 866
+ + +I+E G L +L KY+L++ + +++AL YL +
Sbjct: 106 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FV 161
Query: 867 HCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCG 926
H D+ NVL+ + L DFG+S+ ++ + +MAPE + ++
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 221
Query: 927 DVYSFGILMIE 937
DV+ FG+ M E
Sbjct: 222 DVWMFGVCMWE 232
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 70.9 bits (172), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 119/229 (51%), Gaps = 30/229 (13%)
Query: 746 FSESNLIGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSF-DAECEVLRRVRHRNLV 803
++++ +IG GSFG VY+A L G VAIK L G K+F + E +++R++ H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQG--KAFKNRELQIMRKLDHCNIV 76
Query: 804 KIISSCSNHGFKA------LILEYMPQG--SLEKWLYSHKYTLNIQQRLDIMIDVASALE 855
++ + G K L+L+Y+P + + K TL + M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 856 YLHHGHPTPVIHCDLKPSNVLLDDDT-VAHLSDFGISK-LLDGEDSVTQTMTLATFGYMA 913
Y+H + H D+KP N+LLD DT V L DFG +K L+ GE +V+ + + Y A
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 190
Query: 914 PE--YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
PE +G+ S+ DV+S G ++ E + +F G++ + + VE
Sbjct: 191 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLVE 234
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 24/207 (11%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++++ ++G G F VY+A D G AIK + + +A K + E ++MR++ H N+ +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 1396 IVSSCSNPGFKA------LILQYMPQGSLE---KWLYSHNYLLNIEQRLDIMIDVACALE 1446
+ + G K L+L Y+P + + L I +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
Y+H S I H D+KP N+LLD D V L DFG AK L V + + Y AP
Sbjct: 137 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAP 191
Query: 1506 E--YGSEGIVSTSGDVYSFGILMMETL 1530
E +G+ S S DV+S G ++ E L
Sbjct: 192 ELIFGATDYTS-SIDVWSAGCVLAELL 217
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 70.9 bits (172), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 13/215 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRH 799
+ F +G G FG+VY A + A+KV F QL+ G E E+ +RH
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLH 858
N++++ + LILEY P G++ + L K + +QR I ++A+AL Y H
Sbjct: 94 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 151
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
VIH D+KP N+LL ++DFG S S +T T Y+ PE
Sbjct: 152 SKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIE 205
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ D++S G+L E K P + ET
Sbjct: 206 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 240
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 14/239 (5%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECE 1383
++ + A F LG G F +VY A A+K+ F Q ++A E E
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVA 1442
+ +RH N+ ++ + LIL+Y P G++ + L + EQR I ++A
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELA 144
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGY 1502
AL Y H S +IH D+KP N+LL + DFG + S ++T T+ Y
Sbjct: 145 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDY 198
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ PE + D++S G+L E L + P + E + VE + PD VT+
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 257
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 70.9 bits (172), Expect = 6e-12, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 9/204 (4%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+V A A AIKI + ++ + E +VM R+ H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + + L Y G L K++ R ++ ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 146
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-LATIGYMAPEYGSEG 1511
IIH DLKP N+LL++DM + DFG AK+L + + + T Y++PE +E
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
S D+++ G ++ + + P
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPP 230
Score = 64.7 bits (156), Expect = 4e-10, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
+ F ++G GSF +V A L AIK+ ++ + + E +V+ R+ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
VK+ + + L Y G L K++ R ++ SALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 147
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT-LATFGYMAPEYGS 918
+IH DLKP N+LL++D ++DFG +K+L E + + + T Y++PE +
Sbjct: 148 ---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 919 EGIVSTCGDVYSFGILMIE 937
E D+++ G ++ +
Sbjct: 205 EKSACKSSDLWALGCIIYQ 223
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase-
1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine
Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 70.9 bits (172), Expect = 6e-12, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 9/204 (4%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+V A A AIKI + ++ + E +VM R+ H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + + L Y G L K++ R ++ ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 150
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-LATIGYMAPEYGSEG 1511
IIH DLKP N+LL++DM + DFG AK+L + + + T Y++PE +E
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
S D+++ G ++ + + P
Sbjct: 211 SACKSSDLWALGCIIYQLVAGLPP 234
Score = 64.7 bits (156), Expect = 4e-10, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
+ F ++G GSF +V A L AIK+ ++ + + E +V+ R+ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
VK+ + + L Y G L K++ R ++ SALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 151
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT-LATFGYMAPEYGS 918
+IH DLKP N+LL++D ++DFG +K+L E + + + T Y++PE +
Sbjct: 152 ---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 919 EGIVSTCGDVYSFGILMIE 937
E D+++ G ++ +
Sbjct: 209 EKSACKSSDLWALGCIIYQ 227
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 9/197 (4%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFSLQ---EDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+V A A AIKI + ++ + E +VM R+ H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + + L Y G L K++ R ++ ALEYLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 152
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEG 1511
IIH DLKP N+LL++DM + DFG AK+L + + T Y++PE +E
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 1512 IVSTSGDVYSFGILMME 1528
S D+++ G ++ +
Sbjct: 213 SACKSSDLWALGCIIYQ 229
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
+ F ++G GSF +V A L AIK+ ++ + + E +V+ R+ H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
VK+ + + L Y G L K++ R ++ SALEYLH
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 153
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFGYMAPEYGS 918
+IH DLKP N+LL++D ++DFG +K+L E + + T Y++PE +
Sbjct: 154 ---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 919 EGIVSTCGDVYSFGILMIE 937
E D+++ G ++ +
Sbjct: 211 EKSACKSSDLWALGCIIYQ 229
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 36/223 (16%)
Query: 750 NLIGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAIK-SFDAECEVLRRV-RHR 800
++G+G+FG V AT YG++ VA+K+ + D + + + +E +++ ++ H
Sbjct: 51 KVLGSGAFGKVMNAT-AYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHE 109
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWL-------------YSHKYTLNIQQRLDIM 847
N+V ++ +C+ G LI EY G L +L Y ++ L ++ L+++
Sbjct: 110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169
Query: 848 ---------IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGE 897
VA +E+L +H DL NVL+ V + DFG+++ ++
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS 226
Query: 898 DSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+ V + +MAPE EGI + DV+S+GIL+ E F+
Sbjct: 227 NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 36/223 (16%)
Query: 1341 NLLGTGIFSSVYKATFADGTN-------AAIKIFSLQEDRALK-SFDAECEVMRRI-RHR 1391
+LG+G F V AT A G + A+K+ + D + + + +E ++M ++ H
Sbjct: 51 KVLGSGAFGKVMNAT-AYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHE 109
Query: 1392 NLAKIVSSCSNPGFKALILQYMPQGSLEKWL-------------YSHNYLLNIEQRLDIM 1438
N+ ++ +C+ G LI +Y G L +L Y + L E+ L+++
Sbjct: 110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169
Query: 1439 ---------IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGV 1488
VA +E+L S +H DL NVL+ V + DFG+A+ ++
Sbjct: 170 TFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS 226
Query: 1489 DSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ + + + +MAPE EGI + DV+S+GIL+ E +
Sbjct: 227 NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 106/233 (45%), Gaps = 45/233 (19%)
Query: 1333 ATNGFSE----SNLLGTGIFSSVYKATFADGT--NAAIKI--------FSLQEDRALKSF 1378
+T+GF E +LG G+ SSV + T A+KI FS +E + L+
Sbjct: 11 STHGFYENYEPKEILGRGV-SSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 69
Query: 1379 D-AECEVMRRIR-HRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQR-- 1434
E +++R++ H N+ ++ + F L+ M +G L +L L E R
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI 129
Query: 1435 LDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQT 1494
+ +++V CAL L +I+H DLKP N+LLDDDM L DFG + LD + ++
Sbjct: 130 MRALLEVICALHKL------NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS- 182
Query: 1495 MTLATIGYMAPE------------YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
T Y+APE YG E D++S G++M L P
Sbjct: 183 -VCGTPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIMYTLLAGSPP 228
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 39/220 (17%)
Query: 743 TDGFSE----SNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFDA-------- 789
T GF E ++G G V + P A+K+ ++ G+ + +
Sbjct: 12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 790 -ECEVLRRVR-HRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIM 847
E ++LR+V H N++++ + + F L+ + M +G L +L + K TL+ ++ IM
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIM 130
Query: 848 IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA 907
+ LE + H ++H DLKP N+LLDDD L+DFG S LD + +
Sbjct: 131 ---RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS--VCG 185
Query: 908 TFGYMAPE------------YGSEGIVSTCGDVYSFGILM 935
T Y+APE YG E D++S G++M
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIM 219
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 14/219 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRH 799
+ F +G G FG+VY A + A+KV F QL+ G E E+ +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLH 858
N++++ + LILEY P G++ + L K + +QR I ++A+AL Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTATYITELANALSYCH 129
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
VIH D+KP N+LL + ++DFG S + S T+ T Y+ PE
Sbjct: 130 SKR---VIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLC-GTLDYLPPEMIE 183
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ D++S G+L E F MP E T + + ++
Sbjct: 184 GRMHDEKVDLWSLGVLCYE-FLVGMPPFEAHTYQETYRR 221
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 14/224 (6%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECEVMRRIRHRNLAKIVS 1398
LG G F +VY A A+K+ F Q ++A E E+ +RH N+ ++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVACALEYLHQGYSTSII 1457
+ LIL+Y P G++ + L + EQR I ++A AL Y H S +I
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRF--DEQRTATYITELANALSYCH---SKRVI 134
Query: 1458 HCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSG 1517
H D+KP N+LL + + DFG + + S + T+ T+ Y+ PE +
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLC-GTLDYLPPEMIEGRMHDEKV 191
Query: 1518 DVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
D++S G+L E L P + E + VE + PD VT+
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTE 235
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI + MP G L ++ HK + Q L+ + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 136 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 229
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI Q MP G L ++ H + + L+ + +A +
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 131 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 247
Query: 1564 ANLL 1567
++
Sbjct: 248 VYMI 251
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Compound
Ps182 Bound To The Pif-Pocket
Length = 311
Score = 70.5 bits (171), Expect = 8e-12, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+V A A AIKI + ++ + E +VM R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + + L Y G L K++ R ++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEG 1511
IIH DLKP N+LL++DM + DFG AK+L + + T Y++PE +E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
S D+++ G ++ + + P
Sbjct: 210 SAXKSSDLWALGCIIYQLVAGLPP 233
Score = 64.3 bits (155), Expect = 6e-10, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
+ F ++G GSF +V A L AIK+ ++ + + E +V+ R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
VK+ + + L Y G L K++ R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 150
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT-LATFGYMAPEYGS 918
+IH DLKP N+LL++D ++DFG +K+L E + + T Y++PE +
Sbjct: 151 ---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 919 EGIVSTCGDVYSFGILMIE 937
E D+++ G ++ +
Sbjct: 208 EKSAXKSSDLWALGCIIYQ 226
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI + MP G L ++ HK + Q L+ + +A + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 143 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 236
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI Q MP G L ++ H + + L+ + +A +
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 137
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 138 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 254
Query: 1564 ANLL 1567
++
Sbjct: 255 VYMI 258
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI + MP G L ++ HK + Q L+ + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 136 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 229
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI Q MP G L ++ H + + L+ + +A +
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 131 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 247
Query: 1564 ANLL 1567
++
Sbjct: 248 VYMI 251
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 70.1 bits (170), Expect = 8e-12, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+V A A AIKI + ++ + E +VM R+ H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + + L Y G L K++ R ++ ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 146
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEG 1511
IIH DLKP N+LL++DM + DFG AK+L + + T Y++PE +E
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
S D+++ G ++ + + P
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPP 230
Score = 63.9 bits (154), Expect = 7e-10, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
+ F ++G GSF +V A L AIK+ ++ + + E +V+ R+ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
VK+ + + L Y G L K++ R ++ SALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 147
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT-LATFGYMAPEYGS 918
+IH DLKP N+LL++D ++DFG +K+L E + + T Y++PE +
Sbjct: 148 ---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 919 EGIVSTCGDVYSFGILMIE 937
E D+++ G ++ +
Sbjct: 205 EKSACKSSDLWALGCIIYQ 223
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide Complex
Length = 286
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+V A A AIKI + ++ + E +VM R+ H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + + L Y G L K++ R ++ ALEYLH
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 124
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEG 1511
IIH DLKP N+LL++DM + DFG AK+L + + T Y++PE +E
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
S D+++ G ++ + + P
Sbjct: 185 SACKSSDLWALGCIIYQLVAGLPP 208
Score = 63.9 bits (154), Expect = 6e-10, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 9/203 (4%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF---NLQLDGAIKSFDAECEVLR 795
++ + F ++G GSF +V A L AIK+ ++ + + E +V+
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 796 RVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALE 855
R+ H VK+ + + L Y G L K++ R ++ SALE
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 121
Query: 856 YLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT-LATFGYMAP 914
YLH +IH DLKP N+LL++D ++DFG +K+L E + + T Y++P
Sbjct: 122 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 178
Query: 915 EYGSEGIVSTCGDVYSFGILMIE 937
E +E D+++ G ++ +
Sbjct: 179 ELLTEKSACKSSDLWALGCIIYQ 201
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+V A A AIKI + ++ + E +VM R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + + L Y G L K++ R ++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEG 1511
IIH DLKP N+LL++DM + DFG AK+L + + T Y++PE +E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
S D+++ G ++ + + P
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPP 233
Score = 63.9 bits (154), Expect = 7e-10, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
+ F ++G GSF +V A L AIK+ ++ + + E +V+ R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
VK+ + + L Y G L K++ R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 150
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT-LATFGYMAPEYGS 918
+IH DLKP N+LL++D ++DFG +K+L E + + T Y++PE +
Sbjct: 151 ---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 919 EGIVSTCGDVYSFGILMIE 937
E D+++ G ++ +
Sbjct: 208 EKSACKSSDLWALGCIIYQ 226
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+V A A AIKI + ++ + E +VM R+ H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + + L Y G L K++ R ++ ALEYLH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 131
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEG 1511
IIH DLKP N+LL++DM + DFG AK+L + + T Y++PE +E
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
S D+++ G ++ + + P
Sbjct: 192 SACKSSDLWALGCIIYQLVAGLPP 215
Score = 63.9 bits (154), Expect = 7e-10, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
+ F ++G GSF +V A L AIK+ ++ + + E +V+ R+ H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
VK+ + + L Y G L K++ R ++ SALEYLH
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 132
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT-LATFGYMAPEYGS 918
+IH DLKP N+LL++D ++DFG +K+L E + + T Y++PE +
Sbjct: 133 ---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 919 EGIVSTCGDVYSFGILMIE 937
E D+++ G ++ +
Sbjct: 190 EKSACKSSDLWALGCIIYQ 208
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+V A A AIKI + ++ + E +VM R+ H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + + L Y G L K++ R ++ ALEYLH
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 125
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEG 1511
IIH DLKP N+LL++DM + DFG AK+L + + T Y++PE +E
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
S D+++ G ++ + + P
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPP 209
Score = 65.1 bits (157), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF---NLQLDGAIKSFDAECE 792
Q ++ + F ++G GSF +V A L AIK+ ++ + + E +
Sbjct: 1 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 60
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
V+ R+ H VK+ + + L Y G L K++ R ++ S
Sbjct: 61 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 119
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT-LATFGY 911
ALEYLH +IH DLKP N+LL++D ++DFG +K+L E + + T Y
Sbjct: 120 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIE 937
++PE +E D+++ G ++ +
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQ 202
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ucn-01
Length = 310
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+V A A AIKI + ++ + E +VM R+ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + + L Y G L K++ R ++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 147
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEG 1511
IIH DLKP N+LL++DM + DFG AK+L + + T Y++PE +E
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
S D+++ G ++ + + P
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPP 231
Score = 63.9 bits (154), Expect = 7e-10, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
+ F ++G GSF +V A L AIK+ ++ + + E +V+ R+ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
VK+ + + L Y G L K++ R ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 148
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT-LATFGYMAPEYGS 918
+IH DLKP N+LL++D ++DFG +K+L E + + T Y++PE +
Sbjct: 149 ---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 919 EGIVSTCGDVYSFGILMIE 937
E D+++ G ++ +
Sbjct: 206 EKSACKSSDLWALGCIIYQ 224
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3
Length = 286
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+V A A AIKI + ++ + E +VM R+ H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + + L Y G L K++ R ++ ALEYLH
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 126
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEG 1511
IIH DLKP N+LL++DM + DFG AK+L + + T Y++PE +E
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 186
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
S D+++ G ++ + + P
Sbjct: 187 SACKSSDLWALGCIIYQLVAGLPP 210
Score = 65.1 bits (157), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF---NLQLDGAIKSFDAECE 792
Q ++ + F ++G GSF +V A L AIK+ ++ + + E +
Sbjct: 2 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 61
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
V+ R+ H VK+ + + L Y G L K++ R ++ S
Sbjct: 62 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 120
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT-LATFGY 911
ALEYLH +IH DLKP N+LL++D ++DFG +K+L E + + T Y
Sbjct: 121 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIE 937
++PE +E D+++ G ++ +
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQ 203
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-8
Length = 289
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+V A A AIKI + ++ + E +VM R+ H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + + L Y G L K++ R ++ ALEYLH
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 127
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEG 1511
IIH DLKP N+LL++DM + DFG AK+L + + T Y++PE +E
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 187
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
S D+++ G ++ + + P
Sbjct: 188 SACKSSDLWALGCIIYQLVAGLPP 211
Score = 65.1 bits (157), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF---NLQLDGAIKSFDAECE 792
Q ++ + F ++G GSF +V A L AIK+ ++ + + E +
Sbjct: 3 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 62
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
V+ R+ H VK+ + + L Y G L K++ R ++ S
Sbjct: 63 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 121
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT-LATFGY 911
ALEYLH +IH DLKP N+LL++D ++DFG +K+L E + + T Y
Sbjct: 122 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIE 937
++PE +E D+++ G ++ +
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQ 204
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+V A A AIKI + ++ + E +VM R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + + L Y G L K++ R ++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEG 1511
IIH DLKP N+LL++DM + DFG AK+L + + T Y++PE +E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
S D+++ G ++ + + P
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPP 233
Score = 63.9 bits (154), Expect = 7e-10, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
+ F ++G GSF +V A L AIK+ ++ + + E +V+ R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
VK+ + + L Y G L K++ R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 150
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT-LATFGYMAPEYGS 918
+IH DLKP N+LL++D ++DFG +K+L E + + T Y++PE +
Sbjct: 151 ---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 919 EGIVSTCGDVYSFGILMIE 937
E D+++ G ++ +
Sbjct: 208 EKSACKSSDLWALGCIIYQ 226
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+V A A AIKI + ++ + E +VM R+ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + + L Y G L K++ R ++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 147
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEG 1511
IIH DLKP N+LL++DM + DFG AK+L + + T Y++PE +E
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
S D+++ G ++ + + P
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPP 231
Score = 63.9 bits (154), Expect = 7e-10, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
+ F ++G GSF +V A L AIK+ ++ + + E +V+ R+ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
VK+ + + L Y G L K++ R ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 148
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT-LATFGYMAPEYGS 918
+IH DLKP N+LL++D ++DFG +K+L E + + T Y++PE +
Sbjct: 149 ---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 919 EGIVSTCGDVYSFGILMIE 937
E D+++ G ++ +
Sbjct: 206 EKSACKSSDLWALGCIIYQ 224
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+V A A AIKI + ++ + E +VM R+ H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + + L Y G L K++ R ++ ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 150
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEG 1511
IIH DLKP N+LL++DM + DFG AK+L + + T Y++PE +E
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
S D+++ G ++ + + P
Sbjct: 211 SACKSSDLWALGCIIYQLVAGLPP 234
Score = 63.9 bits (154), Expect = 7e-10, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
+ F ++G GSF +V A L AIK+ ++ + + E +V+ R+ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
VK+ + + L Y G L K++ R ++ SALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 151
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT-LATFGYMAPEYGS 918
+IH DLKP N+LL++D ++DFG +K+L E + + T Y++PE +
Sbjct: 152 ---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 919 EGIVSTCGDVYSFGILMIE 937
E D+++ G ++ +
Sbjct: 209 EKSACKSSDLWALGCIIYQ 227
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In
Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Compound
Ps210 Bound To The Pif-Pocket
Length = 311
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+V A A AIKI + ++ + E +VM R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + + L Y G L K++ R ++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEG 1511
IIH DLKP N+LL++DM + DFG AK+L + + T Y++PE +E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
S D+++ G ++ + + P
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPP 233
Score = 63.9 bits (154), Expect = 7e-10, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
+ F ++G GSF +V A L AIK+ ++ + + E +V+ R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
VK+ + + L Y G L K++ R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 150
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT-LATFGYMAPEYGS 918
+IH DLKP N+LL++D ++DFG +K+L E + + T Y++PE +
Sbjct: 151 ---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 919 EGIVSTCGDVYSFGILMIE 937
E D+++ G ++ +
Sbjct: 208 EKSACKSSDLWALGCIIYQ 226
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+V A A AIKI + ++ + E +VM R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + + L Y G L K++ R ++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEG 1511
IIH DLKP N+LL++DM + DFG AK+L + + T Y++PE +E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
S D+++ G ++ + + P
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPP 233
Score = 63.9 bits (154), Expect = 7e-10, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
+ F ++G GSF +V A L AIK+ ++ + + E +V+ R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
VK+ + + L Y G L K++ R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 150
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT-LATFGYMAPEYGS 918
+IH DLKP N+LL++D ++DFG +K+L E + + T Y++PE +
Sbjct: 151 ---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 919 EGIVSTCGDVYSFGILMIE 937
E D+++ G ++ +
Sbjct: 208 EKSACKSSDLWALGCIIYQ 226
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI + MP G L ++ HK + Q L+ + +A + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 139 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 232
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI Q MP G L ++ H + + L+ + +A +
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 133
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 134 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 250
Query: 1564 ANLL 1567
++
Sbjct: 251 VYMI 254
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI + MP G L ++ HK + Q L+ + +A + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 139 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 232
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI Q MP G L ++ H + + L+ + +A +
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 133
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 134 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 250
Query: 1564 ANLL 1567
++
Sbjct: 251 VYMI 254
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI + MP G L ++ HK + Q L+ + +A + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 139 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 232
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI Q MP G L ++ H + + L+ + +A +
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 133
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 134 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 250
Query: 1564 ANLL 1567
++
Sbjct: 251 VYMI 254
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 23/254 (9%)
Query: 1329 ELRLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFSLQEDRALKS---FDAE 1381
E +A + S LG G F VY K D + I ++ E +++ F E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 1382 CEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS------HNYLL---NIE 1432
VM+ ++ +++ S +I++ M +G L+ +L S +N +L ++
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 138
Query: 1433 QRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492
+ + + ++A + YL+ + +H DL N ++ +D +GDFG+ + + D +
Sbjct: 139 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 195
Query: 1493 QT-MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE 1551
+ L + +M+PE +G+ +T DV+SFG+++ E T + + E L+ +E
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 255
Query: 1552 ESL---PDAVTDVI 1562
L PD D++
Sbjct: 256 GGLLDKPDNCPDML 269
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 749 SNLIGAGSFGSVYKATLPYGM-------NVAIKVFNLQLDGAIK-SFDAECEVLRRVRHR 800
S +G GSFG VY+ + G+ VAIK N + F E V++
Sbjct: 30 SRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL---------NIQQRLDIMIDVA 851
++V+++ S +I+E M +G L+ +L S + + ++ + + + ++A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFG 910
+ YL+ +H DL N ++ +D + DFG+++ + D + L
Sbjct: 149 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 911 YMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+M+PE +G+ +T DV+SFG+++ E T
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With
An Hydantoin Inhibitor
Length = 305
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 23/254 (9%)
Query: 1329 ELRLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFSLQEDRALKS---FDAE 1381
E +A + S LG G F VY K D + I ++ E +++ F E
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 1382 CEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS------HNYLL---NIE 1432
VM+ ++ +++ S +I++ M +G L+ +L S +N +L ++
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 129
Query: 1433 QRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492
+ + + ++A + YL+ + +H DL N ++ +D +GDFG+ + + D +
Sbjct: 130 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 186
Query: 1493 QT-MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE 1551
+ L + +M+PE +G+ +T DV+SFG+++ E T + + E L+ +E
Sbjct: 187 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 246
Query: 1552 ESL---PDAVTDVI 1562
L PD D++
Sbjct: 247 GGLLDKPDNCPDML 260
Score = 59.3 bits (142), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 749 SNLIGAGSFGSVYKATLPYGM-------NVAIKVFNLQLDGAIK-SFDAECEVLRRVRHR 800
S +G GSFG VY+ + G+ VAIK N + F E V++
Sbjct: 21 SRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 79
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL---------NIQQRLDIMIDVA 851
++V+++ S +I+E M +G L+ +L S + + ++ + + + ++A
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFG 910
+ YL+ +H DL N ++ +D + DFG+++ + D + L
Sbjct: 140 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 911 YMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+M+PE +G+ +T DV+SFG+++ E T
Sbjct: 197 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
Length = 301
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 23/254 (9%)
Query: 1329 ELRLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFSLQEDRALKS---FDAE 1381
E +A + S LG G F VY K D + I ++ E +++ F E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 1382 CEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS------HNYLL---NIE 1432
VM+ ++ +++ S +I++ M +G L+ +L S +N +L ++
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 1433 QRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492
+ + + ++A + YL+ + +H DL N ++ +D +GDFG+ + + D +
Sbjct: 126 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 1493 QT-MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE 1551
+ L + +M+PE +G+ +T DV+SFG+++ E T + + E L+ +E
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 242
Query: 1552 ESL---PDAVTDVI 1562
L PD D++
Sbjct: 243 GGLLDKPDNCPDML 256
Score = 59.3 bits (142), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 749 SNLIGAGSFGSVYKATLPYGM-------NVAIKVFNLQLDGAIK-SFDAECEVLRRVRHR 800
S +G GSFG VY+ + G+ VAIK N + F E V++
Sbjct: 17 SRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL---------NIQQRLDIMIDVA 851
++V+++ S +I+E M +G L+ +L S + + ++ + + + ++A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFG 910
+ YL+ +H DL N ++ +D + DFG+++ + D + L
Sbjct: 136 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 911 YMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+M+PE +G+ +T DV+SFG+++ E T
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 23/254 (9%)
Query: 1329 ELRLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFSLQEDRALKS---FDAE 1381
E +A + S LG G F VY K D + I ++ E +++ F E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 1382 CEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS------HNYLL---NIE 1432
VM+ ++ +++ S +I++ M +G L+ +L S +N +L ++
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 128
Query: 1433 QRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492
+ + + ++A + YL+ + +H DL N ++ +D +GDFG+ + + D +
Sbjct: 129 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 185
Query: 1493 QT-MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE 1551
+ L + +M+PE +G+ +T DV+SFG+++ E T + + E L+ +E
Sbjct: 186 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 245
Query: 1552 ESL---PDAVTDVI 1562
L PD D++
Sbjct: 246 GGLLDKPDNCPDML 259
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 749 SNLIGAGSFGSVYKATLPYGM-------NVAIKVFNLQLDGAIK-SFDAECEVLRRVRHR 800
S +G GSFG VY+ + G+ VAIK N + F E V++
Sbjct: 20 SRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL---------NIQQRLDIMIDVA 851
++V+++ S +I+E M +G L+ +L S + + ++ + + + ++A
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFG 910
+ YL+ +H DL N ++ +D + DFG+++ + D + L
Sbjct: 139 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 195
Query: 911 YMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+M+PE +G+ +T DV+SFG+++ E T
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 23/254 (9%)
Query: 1329 ELRLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFSLQEDRALKS---FDAE 1381
E +A + S LG G F VY K D + I ++ E +++ F E
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 1382 CEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS------HNYLL---NIE 1432
VM+ ++ +++ S +I++ M +G L+ +L S +N +L ++
Sbjct: 101 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 160
Query: 1433 QRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492
+ + + ++A + YL+ + +H DL N ++ +D +GDFG+ + + D +
Sbjct: 161 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 217
Query: 1493 QT-MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE 1551
+ L + +M+PE +G+ +T DV+SFG+++ E T + + E L+ +E
Sbjct: 218 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 277
Query: 1552 ESL---PDAVTDVI 1562
L PD D++
Sbjct: 278 GGLLDKPDNCPDML 291
Score = 59.3 bits (142), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 749 SNLIGAGSFGSVYKATLPYGM-------NVAIKVFNLQLDGAIK-SFDAECEVLRRVRHR 800
S +G GSFG VY+ + G+ VAIK N + F E V++
Sbjct: 52 SRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 110
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL---------NIQQRLDIMIDVA 851
++V+++ S +I+E M +G L+ +L S + + ++ + + + ++A
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 170
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFG 910
+ YL+ +H DL N ++ +D + DFG+++ + D + L
Sbjct: 171 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 227
Query: 911 YMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+M+PE +G+ +T DV+SFG+++ E T
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 23/254 (9%)
Query: 1329 ELRLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFSLQEDRALKS---FDAE 1381
E +A + S LG G F VY K D + I ++ E +++ F E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 1382 CEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS------HNYLL---NIE 1432
VM+ ++ +++ S +I++ M +G L+ +L S +N +L ++
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 1433 QRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492
+ + + ++A + YL+ + +H DL N ++ +D +GDFG+ + + D +
Sbjct: 132 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 188
Query: 1493 QT-MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE 1551
+ L + +M+PE +G+ +T DV+SFG+++ E T + + E L+ +E
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 248
Query: 1552 ESL---PDAVTDVI 1562
L PD D++
Sbjct: 249 GGLLDKPDNCPDML 262
Score = 59.3 bits (142), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 749 SNLIGAGSFGSVYKATLPYGM-------NVAIKVFNLQLDGAIK-SFDAECEVLRRVRHR 800
S +G GSFG VY+ + G+ VAIK N + F E V++
Sbjct: 23 SRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL---------NIQQRLDIMIDVA 851
++V+++ S +I+E M +G L+ +L S + + ++ + + + ++A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFG 910
+ YL+ +H DL N ++ +D + DFG+++ + D + L
Sbjct: 142 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 911 YMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+M+PE +G+ +T DV+SFG+++ E T
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (34)
Length = 307
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 23/254 (9%)
Query: 1329 ELRLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFSLQEDRALKS---FDAE 1381
E +A + S LG G F VY K D + I ++ E +++ F E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 1382 CEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS------HNYLL---NIE 1432
VM+ ++ +++ S +I++ M +G L+ +L S +N +L ++
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 1433 QRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492
+ + + ++A + YL+ + +H DL N ++ +D +GDFG+ + + D +
Sbjct: 132 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 188
Query: 1493 QT-MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE 1551
+ L + +M+PE +G+ +T DV+SFG+++ E T + + E L+ +E
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 248
Query: 1552 ESL---PDAVTDVI 1562
L PD D++
Sbjct: 249 GGLLDKPDNCPDML 262
Score = 59.3 bits (142), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 749 SNLIGAGSFGSVYKATLPYGM-------NVAIKVFNLQLDGAIK-SFDAECEVLRRVRHR 800
S +G GSFG VY+ + G+ VAIK N + F E V++
Sbjct: 23 SRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL---------NIQQRLDIMIDVA 851
++V+++ S +I+E M +G L+ +L S + + ++ + + + ++A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFG 910
+ YL+ +H DL N ++ +D + DFG+++ + D + L
Sbjct: 142 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 911 YMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+M+PE +G+ +T DV+SFG+++ E T
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 23/254 (9%)
Query: 1329 ELRLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFSLQEDRALKS---FDAE 1381
E +A + S LG G F VY K D + I ++ E +++ F E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 1382 CEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS------HNYLL---NIE 1432
VM+ ++ +++ S +I++ M +G L+ +L S +N +L ++
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 138
Query: 1433 QRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492
+ + + ++A + YL+ + +H DL N ++ +D +GDFG+ + + D +
Sbjct: 139 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 195
Query: 1493 QT-MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE 1551
+ L + +M+PE +G+ +T DV+SFG+++ E T + + E L+ +E
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 255
Query: 1552 ESL---PDAVTDVI 1562
L PD D++
Sbjct: 256 GGLLDKPDNCPDML 269
Score = 59.3 bits (142), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 749 SNLIGAGSFGSVYKATLPYGM-------NVAIKVFNLQLDGAIK-SFDAECEVLRRVRHR 800
S +G GSFG VY+ + G+ VAIK N + F E V++
Sbjct: 30 SRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL---------NIQQRLDIMIDVA 851
++V+++ S +I+E M +G L+ +L S + + ++ + + + ++A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFG 910
+ YL+ +H DL N ++ +D + DFG+++ + D + L
Sbjct: 149 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 911 YMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+M+PE +G+ +T DV+SFG+++ E T
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 70.1 bits (170), Expect = 9e-12, Method: Composition-based stats.
Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 23/254 (9%)
Query: 1329 ELRLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFSLQEDRALKS---FDAE 1381
E +A + S LG G F VY K D + I ++ E +++ F E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 1382 CEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS------HNYLL---NIE 1432
VM+ ++ +++ S +I++ M +G L+ +L S +N +L ++
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 1433 QRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492
+ + + ++A + YL+ + +H DL N ++ +D +GDFG+ + + D +
Sbjct: 133 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 189
Query: 1493 QT-MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE 1551
+ L + +M+PE +G+ +T DV+SFG+++ E T + + E L+ +E
Sbjct: 190 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 249
Query: 1552 ESL---PDAVTDVI 1562
L PD D++
Sbjct: 250 GGLLDKPDNCPDML 263
Score = 59.3 bits (142), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 749 SNLIGAGSFGSVYKATLPYGM-------NVAIKVFNLQLDGAIK-SFDAECEVLRRVRHR 800
S +G GSFG VY+ + G+ VAIK N + F E V++
Sbjct: 24 SRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL---------NIQQRLDIMIDVA 851
++V+++ S +I+E M +G L+ +L S + + ++ + + + ++A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFG 910
+ YL+ +H DL N ++ +D + DFG+++ + D + L
Sbjct: 143 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 199
Query: 911 YMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+M+PE +G+ +T DV+SFG+++ E T
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 13/215 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRH 799
+ F +G G FG+VY A + A+KV F QL+ G E E+ +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLH 858
N++++ + LILEY P G++ + L K + +QR I ++A+AL Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 125
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
VIH D+KP N+LL ++DFG S S +T T Y+ PE
Sbjct: 126 SKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIE 179
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ D++S G+L E K P + ET
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 14/234 (5%)
Query: 1333 ATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECEVMRRI 1388
A F LG G F +VY A A+K+ F Q ++A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVACALEY 1447
RH N+ ++ + LIL+Y P G++ + L + EQR I ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSY 123
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
H S +IH D+KP N+LL + DFG + S ++T T+ Y+ PE
Sbjct: 124 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 177
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ D++S G+L E L + P + E + VE + PD VT+
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI + MP G L ++ HK + Q L+ + +A + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 138 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 231
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI Q MP G L ++ H + + L+ + +A +
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 132
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 133 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 249
Query: 1564 ANLL 1567
++
Sbjct: 250 VYMI 253
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 13/215 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRH 799
+ F +G G FG+VY A + A+KV F QL+ G E E+ +RH
Sbjct: 25 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 84
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLH 858
N++++ + LILEY P G++ + L K + +QR I ++A+AL Y H
Sbjct: 85 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 142
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
VIH D+KP N+LL ++DFG S S +T T Y+ PE
Sbjct: 143 SKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIE 196
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ D++S G+L E K P + ET
Sbjct: 197 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 231
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 14/239 (5%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECE 1383
++ + A F LG G F +VY A A+K+ F Q ++A E E
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVA 1442
+ +RH N+ ++ + LIL+Y P G++ + L + EQR I ++A
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELA 135
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGY 1502
AL Y H S +IH D+KP N+LL + DFG + S ++T T+ Y
Sbjct: 136 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDY 189
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ PE + D++S G+L E L + P + E + VE + PD VT+
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 248
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 96/215 (44%), Gaps = 13/215 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRH 799
+ F +G G FG+VY A + A+KV F QL+ G E E+ +RH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLH 858
N++++ + LILEY P+G + K L K + +QR I ++A+AL Y H
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTATYITELANALSYCH 130
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
VIH D+KP N+LL ++DFG S S + T Y+ PE
Sbjct: 131 SKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLXGTLDYLPPEMIE 184
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ D++S G+L E K P + ET
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 105/239 (43%), Gaps = 14/239 (5%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECE 1383
++ + A F LG G F +VY A A+K+ F Q ++A E E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVA 1442
+ +RH N+ ++ + LIL+Y P+G + K L + EQR I ++A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKF--DEQRTATYITELA 123
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGY 1502
AL Y H S +IH D+KP N+LL + DFG + S ++ T+ Y
Sbjct: 124 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLXGTLDY 177
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ PE + D++S G+L E L + P + E + VE + PD VT+
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 100/222 (45%), Gaps = 13/222 (5%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECE 792
++ Q + F +G G FG+VY A + A+KV F QL+ G E E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVA 851
+ +RH N++++ + LILEY P G++ + L K + +QR I ++A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 123
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
+AL Y H VIH D+KP N+LL ++DFG S S +T T Y
Sbjct: 124 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDY 177
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ PE + D++S G+L E K P + ET
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 14/239 (5%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECE 1383
++ + A F LG G F +VY A A+K+ F Q ++A E E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVA 1442
+ +RH N+ ++ + LIL+Y P G++ + L + EQR I ++A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELA 123
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGY 1502
AL Y H S +IH D+KP N+LL + DFG + S ++T T+ Y
Sbjct: 124 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDY 177
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ PE + D++S G+L E L + P + E + VE + PD VT+
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI + MP G L ++ HK + Q L+ + +A + YL
Sbjct: 87 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 145
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 146 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 202
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 203 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 239
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 22 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 81
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI Q MP G L ++ H + + L+ + +A +
Sbjct: 82 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 140
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 141 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 197
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 198 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 257
Query: 1564 ANLL 1567
++
Sbjct: 258 VYMI 261
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI + MP G L ++ HK + Q L+ + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 136 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 229
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI Q MP G L ++ H + + L+ + +A +
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 131 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 247
Query: 1564 ANLL 1567
++
Sbjct: 248 VYMI 251
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI + MP G L ++ HK + Q L+ + +A + YL
Sbjct: 83 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 141
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 142 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 198
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 199 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 235
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 18 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 77
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI Q MP G L ++ H + + L+ + +A +
Sbjct: 78 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 136
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 137 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 193
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 194 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 253
Query: 1564 ANLL 1567
++
Sbjct: 254 VYMI 257
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 13/206 (6%)
Query: 738 ELQRLTDGFSESNLIGAGSFGSVYKATL-----PYGMNVAIKVF-NLQLDGAIKSFDAEC 791
E+QR + IG G FG V++ P M VAIK N D + F E
Sbjct: 6 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENP-AMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 792 EVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVA 851
+R+ H ++VK+I + + +I+E G L +L KY+L++ + ++
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 121
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
+AL YL +H D+ NVL+ + L DFG+S+ ++ + +
Sbjct: 122 TALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIE 937
MAPE + ++ DV+ FG+ M E
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWE 204
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 11/194 (5%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIF-----SLQEDRALKSFDAECEVMRRIRHRNLAKIV 1397
+G G F V++ + N A+ + + D + F E MR+ H ++ K++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 1398 SSCS-NPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSI 1456
+ NP + +I++ G L +L Y L++ + ++ AL YL S
Sbjct: 78 GVITENPVW--IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRF 132
Query: 1457 IHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTS 1516
+H D+ NVL+ + LGDFG+++ ++ K + I +MAPE + +++
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 192
Query: 1517 GDVYSFGILMMETL 1530
DV+ FG+ M E L
Sbjct: 193 SDVWMFGVCMWEIL 206
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI++ MP G L ++ HK + Q L+ + +A + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG +KLL E+ +MA E
Sbjct: 138 RR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 231
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI+Q MP G L ++ H + + L+ + +A +
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 132
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG AKLL + I +MA
Sbjct: 133 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 249
Query: 1564 ANLL 1567
++
Sbjct: 250 VYMI 253
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI + MP G L ++ HK + Q L+ + +A + YL
Sbjct: 102 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 160
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 161 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 217
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 218 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 254
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 114/270 (42%), Gaps = 13/270 (4%)
Query: 1307 DKSRPTENNLLNTAALRRISYQELR-LATNGFSESNLLGTGIFSSVYKATF---ADGTNA 1362
D PT NL + + LR L F + +LG+G F +VYK + +
Sbjct: 11 DYDIPTTENLYFQGSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI 70
Query: 1363 AIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLE 1419
+ I L+E +A K E VM + + ++ +++ C + LI Q MP G L
Sbjct: 71 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 129
Query: 1420 KWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDF 1479
++ H + + L+ + +A + YL ++H DL NVL+ + DF
Sbjct: 130 DYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 186
Query: 1480 GIAKLLDGVDSMKQTM-TLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTD 1537
G+AKLL + I +MA E I + DV+S+G+ + E +T KP D
Sbjct: 187 GLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
Query: 1538 DMFTGEVCLKHWVEESLPDAVTDVIDANLL 1567
+ E+ E LP ID ++
Sbjct: 247 GIPASEISSILEKGERLPQPPICTIDVYMI 276
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 12/205 (5%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKS-FDAECEVLRRVRHRN 801
D F + +GAG+ G V K P G+ +A K+ +L++ AI++ E +VL
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 802 LVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRL--DIMIDVASALEYLHH 859
+V + + G ++ +E+M GSL++ L K I + + + I V L YL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLRE 132
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
H ++H D+KPSN+L++ L DFG+S L DS+ + + T YMAPE
Sbjct: 133 KHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSF-VGTRSYMAPERLQG 187
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
S D++S G+ ++E + P
Sbjct: 188 THYSVQSDIWSMGLSLVELAVGRYP 212
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 8/206 (3%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQEDRALKS-FDAECEVMRRIR 1389
L + F + LG G V K G A K+ L+ A+++ E +V+
Sbjct: 13 LKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN 72
Query: 1390 HRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLH 1449
+ + + G ++ +++M GSL++ L + E + I V L YL
Sbjct: 73 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPE-EILGKVSIAVLRGLAYLR 131
Query: 1450 QGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGS 1509
+ + I+H D+KPSN+L++ L DFG++ L +DSM + + T YMAPE
Sbjct: 132 EKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSF-VGTRSYMAPERLQ 186
Query: 1510 EGIVSTSGDVYSFGILMMETLTRRKP 1535
S D++S G+ ++E R P
Sbjct: 187 GTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI + MP G L ++ HK + Q L+ + +A + YL
Sbjct: 74 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLED 132
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 133 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 189
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 190 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 226
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 9 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 68
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI Q MP G L ++ H + + L+ + +A +
Sbjct: 69 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGM 127
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 128 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 184
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 185 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 244
Query: 1564 ANLL 1567
++
Sbjct: 245 VYMI 248
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI++ MP G L ++ HK + Q L+ + +A + YL
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG +KLL E+ +MA E
Sbjct: 140 RR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 233
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI+Q MP G L ++ H + + L+ + +A +
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 134
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG AKLL + I +MA
Sbjct: 135 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 192 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 251
Query: 1564 ANLL 1567
++
Sbjct: 252 VYMI 255
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI++ MP G L ++ HK + Q L+ + +A + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG +KLL E+ +MA E
Sbjct: 138 RR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 231
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI+Q MP G L ++ H + + L+ + +A +
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 132
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG AKLL + I +MA
Sbjct: 133 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 249
Query: 1564 ANLL 1567
++
Sbjct: 250 VYMI 253
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 13/215 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRH 799
+ F +G G FG+VY A + A+KV F QL+ G E E+ +RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLH 858
N++++ + LILEY P G++ + L K + +QR I ++A+AL Y H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 128
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
VIH D+KP N+LL ++DFG S S +T T Y+ PE
Sbjct: 129 SKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIE 182
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ D++S G+L E K P + ET
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 14/239 (5%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECE 1383
++ + A F LG G F +VY A A+K+ F Q ++A E E
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVA 1442
+ +RH N+ ++ + LIL+Y P G++ + L + EQR I ++A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELA 121
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGY 1502
AL Y H S +IH D+KP N+LL + DFG + S ++T T+ Y
Sbjct: 122 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDY 175
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ PE + D++S G+L E L + P + E + VE + PD VT+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 69.7 bits (169), Expect = 1e-11, Method: Composition-based stats.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 14/219 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG 860
N+VK++ L+ E++ Q L+K++ + T I L I + L+ L
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT-GIPLPL-IKSYLFQLLQGLAFC 123
Query: 861 HPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YGS 918
H V+H DLKP N+L++ + L+DFG+++ G T T + T Y APE G
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGC 182
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 183 K-YYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQ 216
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALKSFDA--ECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L + A E +++ + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRL--DIMIDVACALEYLHQG 1451
K++ L+ +++ Q L+K++ + L I L + + L + H
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH-- 124
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--YGS 1509
S ++H DLKP N+L++ + L DFG+A+ GV T + T+ Y APE G
Sbjct: 125 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGC 182
Query: 1510 EGIVSTSGDVYSFGILMMETLTRR 1533
+ ST+ D++S G + E +TRR
Sbjct: 183 K-YYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 748 ESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQL------DGAIK-SFDAECEVLRRVRHR 800
E +G+G+FG+V K Y M +K +++ D A+K AE V++++ +
Sbjct: 373 EDKELGSGNFGTVKKGY--YQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 430
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG 860
+V++I C + L++E G L K+L +++ + + ++++ V+ ++YL
Sbjct: 431 YIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEES 488
Query: 861 HPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF--GYMAPEYGS 918
+ +H DL NVLL A +SDFG+SK L +++ + T + + APE +
Sbjct: 489 N---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 545
Query: 919 EGIVSTCGDVYSFGILMIETFT 940
S+ DV+SFG+LM E F+
Sbjct: 546 YYKFSSKSDVWSFGVLMWEAFS 567
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 1339 ESNLLGTGIFSSVYKATFADGTNAAIKIFSL----QEDRALK-SFDAECEVMRRIRHRNL 1393
E LG+G F +V K + + D ALK AE VM+++ + +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
+++ C + L+++ G L K+L N + + ++++ V+ ++YL +
Sbjct: 433 VRMIGICEAESW-MLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE--- 487
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM--KQTMTLATIGYMAPEYGSEG 1511
++ +H DL NVLL A + DFG++K L ++ QT + + APE +
Sbjct: 488 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 547
Query: 1512 IVSTSGDVYSFGILMMETLTR-RKPTDDMFTGEV 1544
S+ DV+SFG+LM E + +KP M EV
Sbjct: 548 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 581
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 13/215 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRH 799
+ F +G G FG+VY A + A+KV F QL+ G E E+ +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLH 858
N++++ + LILEY P G++ + L K + +QR I ++A+AL Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 125
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
VIH D+KP N+LL ++DFG S S +T T Y+ PE
Sbjct: 126 SKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTXLCGTLDYLPPEMIE 179
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ D++S G+L E K P + ET
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 14/234 (5%)
Query: 1333 ATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECEVMRRI 1388
A F LG G F +VY A A+K+ F Q ++A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVACALEY 1447
RH N+ ++ + LIL+Y P G++ + L + EQR I ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSY 123
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
H S +IH D+KP N+LL + DFG + S ++T T+ Y+ PE
Sbjct: 124 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTXLCGTLDYLPPEM 177
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ D++S G+L E L + P + E + VE + PD VT+
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 69.7 bits (169), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 1340 SNLLGTGIFSSVYKATFAD--GTNAAIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLA 1394
+ +LG G F VY+ + + G + + + ++D L + F +E +M+ + H ++
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 1395 KIVSSCSN-PGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
K++ P + +I++ P G L +L + L + + + + A+ YL S
Sbjct: 89 KLIGIIEEEPTW--IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---S 143
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIV 1513
+ +H D+ N+L+ LGDFG+++ ++ D K ++T I +M+PE +
Sbjct: 144 INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 203
Query: 1514 STSGDVYSFGILMMETLT 1531
+T+ DV+ F + M E L+
Sbjct: 204 TTASDVWMFAVCMWEILS 221
Score = 67.8 bits (164), Expect = 5e-11, Method: Composition-based stats.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 749 SNLIGAGSFGSVYKATLP----YGMNVAIKVF--NLQLDGAIKSFDAECEVLRRVRHRNL 802
+ ++G G FG VY+ +NVA+K + LD K F +E +++ + H ++
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-FMSEAVIMKNLDHPHI 87
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
VK+I +I+E P G L +L +K +L + + + + A+ YL
Sbjct: 88 VKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---S 143
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIV 922
+H D+ N+L+ L DFG+S+ ++ ED ++T +M+PE +
Sbjct: 144 INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 203
Query: 923 STCGDVYSFGILMIETFT 940
+T DV+ F + M E +
Sbjct: 204 TTASDVWMFAVCMWEILS 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 69.7 bits (169), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 1340 SNLLGTGIFSSVYKATFAD--GTNAAIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLA 1394
+ +LG G F VY+ + + G + + + ++D L + F +E +M+ + H ++
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 1395 KIVSSCSN-PGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
K++ P + +I++ P G L +L + L + + + + A+ YL S
Sbjct: 73 KLIGIIEEEPTW--IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---S 127
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIV 1513
+ +H D+ N+L+ LGDFG+++ ++ D K ++T I +M+PE +
Sbjct: 128 INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 187
Query: 1514 STSGDVYSFGILMMETLT 1531
+T+ DV+ F + M E L+
Sbjct: 188 TTASDVWMFAVCMWEILS 205
Score = 67.8 bits (164), Expect = 5e-11, Method: Composition-based stats.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 749 SNLIGAGSFGSVYKATLP----YGMNVAIKVF--NLQLDGAIKSFDAECEVLRRVRHRNL 802
+ ++G G FG VY+ +NVA+K + LD K F +E +++ + H ++
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-FMSEAVIMKNLDHPHI 71
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
VK+I +I+E P G L +L +K +L + + + + A+ YL
Sbjct: 72 VKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---S 127
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIV 922
+H D+ N+L+ L DFG+S+ ++ ED ++T +M+PE +
Sbjct: 128 INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 187
Query: 923 STCGDVYSFGILMIETFT 940
+T DV+ F + M E +
Sbjct: 188 TTASDVWMFAVCMWEILS 205
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 69.7 bits (169), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 1340 SNLLGTGIFSSVYKATFAD--GTNAAIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLA 1394
+ +LG G F VY+ + + G + + + ++D L + F +E +M+ + H ++
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 1395 KIVSSCSN-PGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
K++ P + +I++ P G L +L + L + + + + A+ YL S
Sbjct: 77 KLIGIIEEEPTW--IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---S 131
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIV 1513
+ +H D+ N+L+ LGDFG+++ ++ D K ++T I +M+PE +
Sbjct: 132 INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 191
Query: 1514 STSGDVYSFGILMMETLT 1531
+T+ DV+ F + M E L+
Sbjct: 192 TTASDVWMFAVCMWEILS 209
Score = 67.8 bits (164), Expect = 5e-11, Method: Composition-based stats.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 749 SNLIGAGSFGSVYKATLP----YGMNVAIKVF--NLQLDGAIKSFDAECEVLRRVRHRNL 802
+ ++G G FG VY+ +NVA+K + LD K F +E +++ + H ++
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-FMSEAVIMKNLDHPHI 75
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
VK+I +I+E P G L +L +K +L + + + + A+ YL
Sbjct: 76 VKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---S 131
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIV 922
+H D+ N+L+ L DFG+S+ ++ ED ++T +M+PE +
Sbjct: 132 INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 191
Query: 923 STCGDVYSFGILMIETFT 940
+T DV+ F + M E +
Sbjct: 192 TTASDVWMFAVCMWEILS 209
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 13/215 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRH 799
+ F +G G FG+VY A + A+KV F QL+ G E E+ +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLH 858
N++++ + LILEY P G++ + L K + +QR I ++A+AL Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 125
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
VIH D+KP N+LL ++DFG S S +T T Y+ PE
Sbjct: 126 SKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTELCGTLDYLPPEMIE 179
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ D++S G+L E K P + ET
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 14/234 (5%)
Query: 1333 ATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECEVMRRI 1388
A F LG G F +VY A A+K+ F Q ++A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVACALEY 1447
RH N+ ++ + LIL+Y P G++ + L + EQR I ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSY 123
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
H S +IH D+KP N+LL + DFG + S ++T T+ Y+ PE
Sbjct: 124 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTELCGTLDYLPPEM 177
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ D++S G+L E L + P + E + VE + PD VT+
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 748 ESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQL------DGAIK-SFDAECEVLRRVRHR 800
E +G+G+FG+V K Y M +K +++ D A+K AE V++++ +
Sbjct: 374 EDKELGSGNFGTVKKGY--YQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 431
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG 860
+V++I C + L++E G L K+L +++ + + ++++ V+ ++YL
Sbjct: 432 YIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEES 489
Query: 861 HPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF--GYMAPEYGS 918
+ +H DL NVLL A +SDFG+SK L +++ + T + + APE +
Sbjct: 490 N---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 546
Query: 919 EGIVSTCGDVYSFGILMIETFT 940
S+ DV+SFG+LM E F+
Sbjct: 547 YYKFSSKSDVWSFGVLMWEAFS 568
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 1339 ESNLLGTGIFSSVYKATFADGTNAAIKIFSL----QEDRALK-SFDAECEVMRRIRHRNL 1393
E LG+G F +V K + + D ALK AE VM+++ + +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
+++ C + L+++ G L K+L N + + ++++ V+ ++YL +
Sbjct: 434 VRMIGICEAESW-MLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE--- 488
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM--KQTMTLATIGYMAPEYGSEG 1511
++ +H DL NVLL A + DFG++K L ++ QT + + APE +
Sbjct: 489 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 548
Query: 1512 IVSTSGDVYSFGILMMETLTR-RKPTDDMFTGEV 1544
S+ DV+SFG+LM E + +KP M EV
Sbjct: 549 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 582
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 14/219 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE-YGS 918
V+H DLKP N+L++ + L+DFG+++ G T T + T Y APE
Sbjct: 129 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLG 184
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
ST D++S G + E TR+ +F G++ + +
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 219
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 124
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE-YG 1508
+S ++H DLKP N+L++ + L DFG+A+ GV T + T+ Y APE
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILL 183
Query: 1509 SEGIVSTSGDVYSFGILMMETLTRR 1533
ST+ D++S G + E +TRR
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 11/194 (5%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIF-----SLQEDRALKSFDAECEVMRRIRHRNLAKIV 1397
+G G F V++ + N A+ + + D + F E MR+ H ++ K++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 1398 SSCS-NPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSI 1456
+ NP + +I++ G L +L Y L++ + ++ AL YL S
Sbjct: 78 GVITENPVW--IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRF 132
Query: 1457 IHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTS 1516
+H D+ NVL+ + LGDFG+++ ++ K + I +MAPE + +++
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 192
Query: 1517 GDVYSFGILMMETL 1530
DV+ FG+ M E L
Sbjct: 193 SDVWMFGVCMWEIL 206
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 738 ELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVF-----NLQLDGAIKSFDAECE 792
E+QR + IG G FG V++ N A+ V N D + F E
Sbjct: 6 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+R+ H ++VK+I + + +I+E G L +L KY+L++ + +++
Sbjct: 64 TMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 122
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYM 912
AL YL +H D+ NVL+ + L DFG+S+ ++ + +M
Sbjct: 123 ALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 179
Query: 913 APEYGSEGIVSTCGDVYSFGILMIE 937
APE + ++ DV+ FG+ M E
Sbjct: 180 APESINFRRFTSASDVWMFGVCMWE 204
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 13/215 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRH 799
+ F +G G FG+VY A + A+KV F QL+ G E E+ +RH
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLH 858
N++++ + LILEY P G++ + L K + +QR I ++A+AL Y H
Sbjct: 67 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 124
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
VIH D+KP N+LL ++DFG S S +T T Y+ PE
Sbjct: 125 SKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIE 178
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ D++S G+L E K P + ET
Sbjct: 179 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 213
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 14/234 (5%)
Query: 1333 ATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECEVMRRI 1388
A F LG G F +VY A A+K+ F Q ++A E E+ +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVACALEY 1447
RH N+ ++ + LIL+Y P G++ + L + EQR I ++A AL Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSY 122
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
H S +IH D+KP N+LL + DFG + S ++T T+ Y+ PE
Sbjct: 123 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 176
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ D++S G+L E L + P + E + VE + PD VT+
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 230
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 27/222 (12%)
Query: 737 QELQR----LTDGFSESNLIGAGSFG----SVYKATLPYGMNVAIKVFNLQLDGAIKSFD 788
Q+L R TDG+ IG GS+ ++KAT M A+K+ +D + +
Sbjct: 11 QQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKAT---NMEFAVKI----IDKSKRDPT 63
Query: 789 AECEVLRRV-RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIM 847
E E+L R +H N++ + + + ++ E M G L + K+ + ++ ++
Sbjct: 64 EEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF-FSEREASAVL 122
Query: 848 IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDT----VAHLSDFGISKLLDGEDSVTQT 903
+ +EYLH V+H DLKPSN+L D++ + DFG +K L E+ + T
Sbjct: 123 FTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT 179
Query: 904 MTLATFGYMAPEY-GSEGIVSTCGDVYSFGILMIETFTRKMP 944
T ++APE +G + C D++S G+L+ T P
Sbjct: 180 -PCYTANFVAPEVLERQGYDAAC-DIWSLGVLLYTMLTGYTP 219
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 1334 TNGFSESNLLGTGIFSSVYKATFADGTNA--AIKIFSLQEDRALKSFDAECEVMRRI-RH 1390
T+G+ +G G +S V K TN A+KI D++ + E E++ R +H
Sbjct: 21 TDGYEVKEDIGVGSYS-VCKRCIHKATNMEFAVKII----DKSKRDPTEEIEILLRYGQH 75
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQ 1450
N+ + + + ++ + M G L + + E ++ + +EYLH
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASA-VLFTITKTVEYLH- 133
Query: 1451 GYSTSIIHCDLKPSNVLLDDD----MVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE 1506
+ ++H DLKPSN+L D+ + DFG AK L + + T T ++APE
Sbjct: 134 --AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT-PCYTANFVAPE 190
Query: 1507 YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
+ D++S G+L+ LT P
Sbjct: 191 VLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 11/194 (5%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIF-----SLQEDRALKSFDAECEVMRRIRHRNLAKIV 1397
+G G F V++ + N A+ + + D + F E MR+ H ++ K++
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 1398 SSCS-NPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSI 1456
+ NP + +I++ G L +L Y L++ + ++ AL YL S
Sbjct: 83 GVITENPVW--IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRF 137
Query: 1457 IHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTS 1516
+H D+ NVL+ + LGDFG+++ ++ K + I +MAPE + +++
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 197
Query: 1517 GDVYSFGILMMETL 1530
DV+ FG+ M E L
Sbjct: 198 SDVWMFGVCMWEIL 211
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 738 ELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVF-----NLQLDGAIKSFDAECE 792
E+QR + IG G FG V++ N A+ V N D + F E
Sbjct: 11 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 68
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+R+ H ++VK+I + + +I+E G L +L KY+L++ + +++
Sbjct: 69 TMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 127
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYM 912
AL YL +H D+ NVL+ + L DFG+S+ ++ + +M
Sbjct: 128 ALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 184
Query: 913 APEYGSEGIVSTCGDVYSFGILMIE 937
APE + ++ DV+ FG+ M E
Sbjct: 185 APESINFRRFTSASDVWMFGVCMWE 209
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 69.7 bits (169), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 1342 LLGTGIFSSVYKATFADGTN----AAIKIFS-LQEDRALKSFDAECEVMRRIRHRNLAKI 1396
++G G F VY + D AIK S + E + +++F E +MR + H N+ +
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 1397 VSSCSNP-GFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ P G ++L YM G L +++ S ++ + + VA +EYL +
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE---QK 144
Query: 1456 IIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDSMKQTMTLA--TIGYMAPEYGSEGI 1512
+H DL N +LD+ + DFG+A+ +LD Q A + + A E
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYR 204
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+T DV+SFG+L+ E LTR P
Sbjct: 205 FTTKSDVWSFGVLLWELLTRGAP 227
Score = 62.8 bits (151), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 751 LIGAGSFGSVYKATL----PYGMNVAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKI 805
+IG G FG VY + AIK + + +++F E ++R + H N++ +
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 806 IS-SCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
I G ++L YM G L +++ S + ++ + + VA +EYL
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE---QK 144
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTMTLATF--GYMAPEYGSEGI 921
+H DL N +LD+ ++DFG+++ +LD E Q A + A E
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYR 204
Query: 922 VSTCGDVYSFGILMIETFTRKMP 944
+T DV+SFG+L+ E TR P
Sbjct: 205 FTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 11/194 (5%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIF-----SLQEDRALKSFDAECEVMRRIRHRNLAKIV 1397
+G G F V++ + N A+ + + D + F E MR+ H ++ K++
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 1398 SSCS-NPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSI 1456
+ NP + +I++ G L +L Y L++ + ++ AL YL S
Sbjct: 75 GVITENPVW--IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRF 129
Query: 1457 IHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTS 1516
+H D+ NVL+ + LGDFG+++ ++ K + I +MAPE + +++
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 189
Query: 1517 GDVYSFGILMMETL 1530
DV+ FG+ M E L
Sbjct: 190 SDVWMFGVCMWEIL 203
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 9/191 (4%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVF-----NLQLDGAIKSFDAECEVLRRVRHRNLVKII 806
IG G FG V++ N A+ V N D + F E +R+ H ++VK+I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 807 SSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVI 866
+ + +I+E G L +L KY+L++ + +++AL YL +
Sbjct: 75 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FV 130
Query: 867 HCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCG 926
H D+ NVL+ + L DFG+S+ ++ + +MAPE + ++
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 190
Query: 927 DVYSFGILMIE 937
DV+ FG+ M E
Sbjct: 191 DVWMFGVCMWE 201
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI + MP G L ++ HK + Q L+ + +A + YL
Sbjct: 71 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 130 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 223
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 65
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI Q MP G L ++ H + + L+ + +A +
Sbjct: 66 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 124
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 125 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 181
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 182 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 241
Query: 1564 ANLL 1567
++
Sbjct: 242 VYMI 245
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed
With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain Complexed
With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 11/194 (5%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIF-----SLQEDRALKSFDAECEVMRRIRHRNLAKIV 1397
+G G F V++ + N A+ + + D + F E MR+ H ++ K++
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 1398 SSCS-NPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSI 1456
+ NP + +I++ G L +L Y L++ + ++ AL YL S
Sbjct: 80 GVITENPVW--IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRF 134
Query: 1457 IHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTS 1516
+H D+ NVL+ + LGDFG+++ ++ K + I +MAPE + +++
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 194
Query: 1517 GDVYSFGILMMETL 1530
DV+ FG+ M E L
Sbjct: 195 SDVWMFGVCMWEIL 208
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 9/191 (4%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVF-----NLQLDGAIKSFDAECEVLRRVRHRNLVKII 806
IG G FG V++ N A+ V N D + F E +R+ H ++VK+I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 807 SSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVI 866
+ + +I+E G L +L KY+L++ + +++AL YL +
Sbjct: 80 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FV 135
Query: 867 HCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCG 926
H D+ NVL+ + L DFG+S+ ++ + +MAPE + ++
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 195
Query: 927 DVYSFGILMIE 937
DV+ FG+ M E
Sbjct: 196 DVWMFGVCMWE 206
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 11/194 (5%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIF-----SLQEDRALKSFDAECEVMRRIRHRNLAKIV 1397
+G G F V++ + N A+ + + D + F E MR+ H ++ K++
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 1398 SSCS-NPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSI 1456
+ NP + +I++ G L +L Y L++ + ++ AL YL S
Sbjct: 81 GVITENPVW--IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRF 135
Query: 1457 IHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTS 1516
+H D+ NVL+ + LGDFG+++ ++ K + I +MAPE + +++
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 195
Query: 1517 GDVYSFGILMMETL 1530
DV+ FG+ M E L
Sbjct: 196 SDVWMFGVCMWEIL 209
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 9/191 (4%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVF-----NLQLDGAIKSFDAECEVLRRVRHRNLVKII 806
IG G FG V++ N A+ V N D + F E +R+ H ++VK+I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 807 SSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVI 866
+ + +I+E G L +L KY+L++ + +++AL YL +
Sbjct: 81 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FV 136
Query: 867 HCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCG 926
H D+ NVL+ + L DFG+S+ ++ + +MAPE + ++
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 196
Query: 927 DVYSFGILMIE 937
DV+ FG+ M E
Sbjct: 197 DVWMFGVCMWE 207
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 13/215 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRH 799
+ F +G G FG+VY A + A+KV F QL+ G E E+ +RH
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLH 858
N++++ + LILEY P G++ + L K + +QR I ++A+AL Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 129
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
VIH D+KP N+LL ++DFG S S +T T Y+ PE
Sbjct: 130 SKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIE 183
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ D++S G+L E K P + ET
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 218
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 14/234 (5%)
Query: 1333 ATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECEVMRRI 1388
A F LG G F +VY A A+K+ F Q ++A E E+ +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVACALEY 1447
RH N+ ++ + LIL+Y P G++ + L + EQR I ++A AL Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSY 127
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
H S +IH D+KP N+LL + DFG + S ++T T+ Y+ PE
Sbjct: 128 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 181
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ D++S G+L E L + P + E + VE + PD VT+
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 235
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 10/208 (4%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFN---LQLDGAIKSFDAECEVLRRVRH 799
+ F NL+G GSF VY+A ++ G+ VAIK+ + + G ++ E ++ +++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH- 858
+++++ + + + L+LE G + ++L + + + M + + + YLH
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
HG ++H DL SN+LL + ++DFG++ L T+ T Y++PE +
Sbjct: 131 HG----ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC-GTPNYISPEIAT 185
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTD 946
DV+S G + + P D
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRPPFD 213
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 8/205 (3%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIF---SLQEDRALKSFDAECEVMRRIRHRN 1392
F NLLG G F+ VY+A + G AIK+ ++ + ++ E ++ +++H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
+ ++ + + + L+L+ G + ++L + + + M + + YLH
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH--- 129
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S I+H DL SN+LL +M + DFG+A L + K T Y++PE +
Sbjct: 130 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK-MPHEKHYTLCGTPNYISPEIATRSA 188
Query: 1513 VSTSGDVYSFGILMMETLTRRKPTD 1537
DV+S G + L R P D
Sbjct: 189 HGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 14/219 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE-YGS 918
V+H DLKP N+L++ + L+DFG+++ G T T + T Y APE
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
ST D++S G + E TR+ +F G++ + +
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 212
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 117
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE-YG 1508
+S ++H DLKP N+L++ + L DFG+A+ GV T + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILL 176
Query: 1509 SEGIVSTSGDVYSFGILMMETLTRR 1533
ST+ D++S G + E +TRR
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 738 ELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVF-NLQLDGAIKSFDAECE 792
E+QR + IG G FG V Y + M VAIK N D + F E
Sbjct: 6 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+R+ H ++VK+I + + +I+E G L +L K++L++ + +++
Sbjct: 64 TMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 122
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYM 912
AL YL +H D+ NVL+ + L DFG+S+ ++ + +M
Sbjct: 123 ALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWM 179
Query: 913 APEYGSEGIVSTCGDVYSFGILMIE 937
APE + ++ DV+ FG+ M E
Sbjct: 180 APESINFRRFTSASDVWMFGVCMWE 204
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 90/194 (46%), Gaps = 11/194 (5%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIF-----SLQEDRALKSFDAECEVMRRIRHRNLAKIV 1397
+G G F V++ + N A+ + + D + F E MR+ H ++ K++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 1398 SSCS-NPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSI 1456
+ NP + +I++ G L +L + L++ + ++ AL YL S
Sbjct: 78 GVITENPVW--IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRF 132
Query: 1457 IHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTS 1516
+H D+ NVL+ + LGDFG+++ ++ K + I +MAPE + +++
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSA 192
Query: 1517 GDVYSFGILMMETL 1530
DV+ FG+ M E L
Sbjct: 193 SDVWMFGVCMWEIL 206
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 13/215 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRH 799
+ F +G G FG+VY A + A+KV F QL+ G E E+ +RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLH 858
N++++ + LILEY P G++ + L K + +QR I ++A+AL Y H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 128
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
VIH D+KP N+LL ++DFG S S +T T Y+ PE
Sbjct: 129 SKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIE 182
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ D++S G+L E K P + ET
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 14/234 (5%)
Query: 1333 ATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECEVMRRI 1388
A F LG G F +VY A A+K+ F Q ++A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVACALEY 1447
RH N+ ++ + LIL+Y P G++ + L + EQR I ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSY 126
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
H S +IH D+KP N+LL + DFG + S ++T T+ Y+ PE
Sbjct: 127 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 180
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ D++S G+L E L + P + E + VE + PD VT+
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T T + T Y APE G
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 178 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 212
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLS 117
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--Y 1507
+S ++H DLKP N+L++ + L DFG+A+ GV T + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILL 176
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 177 GCK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY--G 917
V+H DLKP N+L++ + L+DFG+++ G T T + T Y APE G
Sbjct: 129 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLG 184
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 185 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 219
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 124
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY-- 1507
+S ++H DLKP N+L++ + L DFG+A+ GV T + T+ Y APE
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILL 183
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 184 GCK-YYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T T + T Y APE G
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLG 178
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 179 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 213
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 118
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--Y 1507
+S ++H DLKP N+L++ + L DFG+A+ GV T + T+ Y APE
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILL 177
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 178 GCK-YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
Js30
Length = 316
Score = 69.3 bits (168), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 9/204 (4%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+V A A AIKI + ++ + E +VM R+ H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + L Y G L K++ R ++ ALEYLH
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 154
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEG 1511
IIH DLKP N+LL++DM + DFG AK+L + + T Y++PE +E
Sbjct: 155 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 214
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
S D+++ G ++ + + P
Sbjct: 215 SACKSSDLWALGCIIYQLVAGLPP 238
Score = 63.2 bits (152), Expect = 1e-09, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
+ F ++G GSF +V A L AIK+ ++ + + E +V+ R+ H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
VK+ + L Y G L K++ R ++ SALEYLH
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 155
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT-LATFGYMAPEYGS 918
+IH DLKP N+LL++D ++DFG +K+L E + + T Y++PE +
Sbjct: 156 ---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 919 EGIVSTCGDVYSFGILMIE 937
E D+++ G ++ +
Sbjct: 213 EKSACKSSDLWALGCIIYQ 231
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T T + T Y APE G
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 178 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 212
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 117
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--Y 1507
+S ++H DLKP N+L++ + L DFG+A+ GV T + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILL 176
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 177 GCK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T T + T Y APE G
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 178 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 212
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 117
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--Y 1507
+S ++H DLKP N+L++ + L DFG+A+ GV T + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILL 176
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 177 GCK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T T + T Y APE G
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 177 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 211
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 116
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--Y 1507
+S ++H DLKP N+L++ + L DFG+A+ GV T + T+ Y APE
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILL 175
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 176 GCK-YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 69.3 bits (168), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 39/218 (17%)
Query: 1337 FSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
F E L+G+G F V+KA DG IK ++A + E + + ++ H N+
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIVH 68
Query: 1396 I--------------VSSCSNPGFKALILQ--YMPQGSLEKWLYSHNYLLNIEQRLDIMI 1439
+ S K L +Q + +G+LE+W IE+R +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQW---------IEKRRGEKL 119
Query: 1440 DVACALEYLHQG-------YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492
D ALE Q +S +I+ DLKPSN+ L D +GDFG+ L + K
Sbjct: 120 DKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK--NDGK 177
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETL 1530
+ + T+ YM+PE S D+Y+ G+++ E L
Sbjct: 178 RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
Score = 61.2 bits (147), Expect = 4e-09, Method: Composition-based stats.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 27/216 (12%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNLQLDGAIKSFDAECEVLRRVR 798
+R F E LIG+G FG V+KA G IK + A + E + L ++
Sbjct: 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLD 62
Query: 799 HRNLVKI--------------ISSCSNHGFKALI--LEYMPQGSLEKWLYSHK-YTLNIQ 841
H N+V + S K L +E+ +G+LE+W+ + L+
Sbjct: 63 HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 122
Query: 842 QRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVT 901
L++ + ++Y+H +I+ DLKPSN+ L D + DFG+ L +
Sbjct: 123 LALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK-- 177
Query: 902 QTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+ + T YM+PE S D+Y+ G+++ E
Sbjct: 178 RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 213
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY--G 917
V+H DLKP N+L++ + L+DFG+++ G T T + T Y APE G
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 177 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 211
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 116
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY-- 1507
+S ++H DLKP N+L++ + L DFG+A+ GV T + T+ Y APE
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILL 175
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 176 GCK-YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 13/222 (5%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECE 792
++ Q + F +G G FG+VY A + A+KV F QL+ G E E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVA 851
+ +RH N++++ + LILEY P G++ + L K + +QR I ++A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 119
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
+AL Y H VIH D+KP N+LL ++DFG S + S T+ T Y
Sbjct: 120 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLC-GTLDY 173
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ PE + D++S G+L E K P + ET
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 14/239 (5%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECE 1383
++ + A F LG G F +VY A A+K+ F Q ++A E E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVA 1442
+ +RH N+ ++ + LIL+Y P G++ + L + EQR I ++A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELA 119
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGY 1502
AL Y H S +IH D+KP N+LL + DFG + + S + T+ T+ Y
Sbjct: 120 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLC-GTLDY 173
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ PE + D++S G+L E L + P + E + VE + PD VT+
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++ +G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI++ MP G L ++ HK + Q L+ + +A + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 143 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 236
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +L +G F +VYK + + + I L+E +A K E VM
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI+Q MP G L ++ H + + L+ + +A +
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 137
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 138 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 254
Query: 1564 ANLL 1567
++
Sbjct: 255 VYMI 258
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 100/222 (45%), Gaps = 13/222 (5%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECE 792
++ Q + F +G G FG+VY A + A+KV F QL+ G E E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVA 851
+ +RH N++++ + LILEY P G++ + L K + +QR I ++A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 119
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
+AL Y H VIH D+KP N+LL ++DFG S S +T T Y
Sbjct: 120 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDY 173
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ PE + D++S G+L E K P + ET
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 14/239 (5%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECE 1383
++ + A F LG G F +VY A A+K+ F Q ++A E E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVA 1442
+ +RH N+ ++ + LIL+Y P G++ + L + EQR I ++A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELA 119
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGY 1502
AL Y H S +IH D+KP N+LL + DFG + S ++T T+ Y
Sbjct: 120 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDY 173
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ PE + D++S G+L E L + P + E + VE + PD VT+
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 68.9 bits (167), Expect = 2e-11, Method: Composition-based stats.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 1359 GTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPG--FKALILQYMP 1414
G + +K+ +++ R + F+ EC +R H N+ ++ +C +P LI +MP
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 1415 QGSLEKWLYS-HNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMV 1473
GSL L+ N++++ Q + +D+A + +LH I L +V++D+DM
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNSRSVMIDEDMT 151
Query: 1474 AHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY---GSEGIVSTSGDVYSFGILMMETL 1530
A + + D S + + ++APE E S D++SF +L+ E +
Sbjct: 152 ARI------SMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 205
Query: 1531 TRRKPTDDMFTGEVCLKHWVEESLP 1555
TR P D+ E+ +K +E P
Sbjct: 206 TREVPFADLSNMEIGMKVALEGLRP 230
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 15/201 (7%)
Query: 768 GMNVAIKVFNLQLDGAIKS--FDAECEVLRRVRHRNLVKIISSCSN--HGFKALILEYMP 823
G ++ +KV ++ KS F+ EC LR H N++ ++ +C + LI +MP
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 824 QGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTV 882
GSL L+ + ++ Q + +D+A + +LH P H L +V++D+D
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHA-LNSRSVMIDEDMT 151
Query: 883 AHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY---GSEGIVSTCGDVYSFGILMIETF 939
A +S + D + S + ++APE E D++SF +L+ E
Sbjct: 152 ARIS------MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 205
Query: 940 TRKMPTDEMFTGETSLKKWVE 960
TR++P ++ E +K +E
Sbjct: 206 TREVPFADLSNMEIGMKVALE 226
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 68.9 bits (167), Expect = 2e-11, Method: Composition-based stats.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 39/231 (16%)
Query: 746 FSESNLI-----GAGSFGSVYKATLPY------GMNVAIKVFNLQLDGA-IKSFDAECEV 793
F NL+ G G FG V KAT + VA+K+ + ++ +E V
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 794 LRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWL---------------------- 831
L++V H +++K+ +CS G LI+EY GSL +L
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 832 -YSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGI 890
+ + L + + ++ ++YL ++H DL N+L+ + +SDFG+
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 891 SKLLDGEDS-VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
S+ + EDS V ++ +MA E + I +T DV+SFG+L+ E T
Sbjct: 197 SRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Score = 64.3 bits (155), Expect = 5e-10, Method: Composition-based stats.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 32/219 (14%)
Query: 1343 LGTGIFSSVYKATF------ADGTNAAIKIFSLQEDRA---LKSFDAECEVMRRIRHRNL 1393
LG G F V KAT A T A+K+ L+E+ + L+ +E V++++ H ++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKM--LKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSH-----NYLL-----------NIEQRLDI 1437
K+ +CS G LI++Y GSL +L YL + ++R
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 1438 MIDVACALEYLHQGYS----TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS-MK 1492
M D+ + QG ++H DL N+L+ + + DFG+++ + DS +K
Sbjct: 149 MGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVK 208
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
++ + +MA E + I +T DV+SFG+L+ E +T
Sbjct: 209 RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 2e-11, Method: Composition-based stats.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 39/231 (16%)
Query: 746 FSESNLI-----GAGSFGSVYKATLPY------GMNVAIKVFNLQLDGA-IKSFDAECEV 793
F NL+ G G FG V KAT + VA+K+ + ++ +E V
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 794 LRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWL---------------------- 831
L++V H +++K+ +CS G LI+EY GSL +L
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 832 -YSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGI 890
+ + L + + ++ ++YL ++H DL N+L+ + +SDFG+
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 891 SKLLDGEDS-VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
S+ + EDS V ++ +MA E + I +T DV+SFG+L+ E T
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Score = 64.3 bits (155), Expect = 5e-10, Method: Composition-based stats.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 32/219 (14%)
Query: 1343 LGTGIFSSVYKATF------ADGTNAAIKIFSLQEDRA---LKSFDAECEVMRRIRHRNL 1393
LG G F V KAT A T A+K+ L+E+ + L+ +E V++++ H ++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKM--LKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSH-----NYLL-----------NIEQRLDI 1437
K+ +CS G LI++Y GSL +L YL + ++R
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 1438 MIDVACALEYLHQGYS----TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS-MK 1492
M D+ + QG ++H DL N+L+ + + DFG+++ + DS +K
Sbjct: 149 MGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVK 208
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
++ + +MA E + I +T DV+SFG+L+ E +T
Sbjct: 209 RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 13/215 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRH 799
+ F +G G FG+VY A + A+KV F QL+ G E E+ +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLH 858
N++++ + LILEY P G++ + L K + +QR I ++A+AL Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 125
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
VIH D+KP N+LL ++DFG S S +T T Y+ PE
Sbjct: 126 SKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPPEMIE 179
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ D++S G+L E K P + ET
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 14/234 (5%)
Query: 1333 ATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECEVMRRI 1388
A F LG G F +VY A A+K+ F Q ++A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVACALEY 1447
RH N+ ++ + LIL+Y P G++ + L + EQR I ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSY 123
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
H S +IH D+KP N+LL + DFG + S ++T T+ Y+ PE
Sbjct: 124 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPPEM 177
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ D++S G+L E L + P + E + VE + PD VT+
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 100/222 (45%), Gaps = 13/222 (5%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECE 792
++ Q + F +G G FG+VY A + A+KV F QL+ G E E
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVA 851
+ +RH N++++ + LILEY P G++ + L K + +QR I ++A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 118
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
+AL Y H VIH D+KP N+LL ++DFG S S +T T Y
Sbjct: 119 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDY 172
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ PE + D++S G+L E K P + ET
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 14/239 (5%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECE 1383
++ + A F LG G F +VY A A+K+ F Q ++A E E
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVA 1442
+ +RH N+ ++ + LIL+Y P G++ + L + EQR I ++A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELA 118
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGY 1502
AL Y H S +IH D+KP N+LL + DFG + S ++T T+ Y
Sbjct: 119 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDY 172
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ PE + D++S G+L E L + P + E + VE + PD VT+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 100/222 (45%), Gaps = 13/222 (5%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECE 792
++ Q + F +G G FG+VY A + A+KV F QL+ G E E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVA 851
+ +RH N++++ + LILEY P G++ + L K + +QR I ++A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 119
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
+AL Y H VIH D+KP N+LL ++DFG S S +T T Y
Sbjct: 120 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDY 173
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ PE + D++S G+L E K P + ET
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 14/239 (5%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECE 1383
++ + A F LG G F +VY A A+K+ F Q ++A E E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVA 1442
+ +RH N+ ++ + LIL+Y P G++ + L + EQR I ++A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELA 119
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGY 1502
AL Y H S +IH D+KP N+LL + DFG + S ++T T+ Y
Sbjct: 120 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDY 173
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ PE + D++S G+L E L + P + E + VE + PD VT+
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide
Inhibitor
Length = 333
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 19/223 (8%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKAT-FADGTNAAIKIFSLQEDRALKSFDAECEVMR 1386
++ N LG G F V +AT F G A+ +++ ++ D + +M
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 1387 RIR-------HRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI 1439
++ H N+ ++ +C++ G +I +Y G L +L + +L + I
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 1440 DVACALEYLH------QGY----STSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGV 1488
A + LH QG S + IH D+ NVLL + VA +GDFG+A+ +++
Sbjct: 159 STASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 1489 DSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ + + + +MAPE + + + DV+S+GIL+ E +
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 21/209 (10%)
Query: 752 IGAGSFGSVYKATLPYGM-------NVAIKVFNLQLDGAIK-SFDAECEVLRRV-RHRNL 802
+GAG+FG V +AT +G+ VA+K+ K + +E +++ + +H N+
Sbjct: 54 LGAGAFGKVVEAT-AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
V ++ +C++ G +I EY G L +L L I AS + LH
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQ 172
Query: 863 TP----------VIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTMTLATFGY 911
IH D+ NVLL + VA + DFG+++ +++ + + + +
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW 232
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFT 940
MAPE + + + DV+S+GIL+ E F+
Sbjct: 233 MAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 96/221 (43%), Gaps = 37/221 (16%)
Query: 1341 NLLGTGIFSSVYKATFADGTNAAIKIFSLQ---------EDRALKSFDAECEVMRRIRHR 1391
+LG G + V++ G N KIF+++ + AE ++ ++H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTG-KIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 1392 NLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVAC-------- 1443
+ ++ + G LIL+Y+ G L + +E+ M D AC
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGEL---------FMQLEREGIFMEDTACFYLAEISM 132
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTL-ATIGY 1502
AL +LHQ II+ DLKP N++L+ L DFG+ K + + T T TI Y
Sbjct: 133 ALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEY 187
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGE 1543
MAPE + + D +S G LM + LT P FTGE
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP----FTGE 224
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 750 NLIGAGSFGSVYKATLPYGMNVAIKVFNLQ-LDGAI--------KSFDAECEVLRRVRHR 800
++G G +G V++ G N K+F ++ L A+ AE +L V+H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTG-KIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG 860
+V +I + G LILEY+ G L L + + +++ AL +LH
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFME-DTACFYLAEISMALGHLHQ- 139
Query: 861 HPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEG 920
+I+ DLKP N++L+ L+DFG+ K + +VT T T YMAPE
Sbjct: 140 --KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFC-GTIEYMAPEILMRS 196
Query: 921 IVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLR 964
+ D +S G LM + T P FTGE KK +++ L+
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPP----FTGENR-KKTIDKILK 235
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 100/222 (45%), Gaps = 13/222 (5%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECE 792
++ Q + F +G G FG+VY A + A+KV F QL+ G E E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVA 851
+ +RH N++++ + LILEY P G++ + L K + +QR I ++A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 123
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
+AL Y H VIH D+KP N+LL ++DFG S S +T T Y
Sbjct: 124 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDY 177
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ PE + D++S G+L E K P + ET
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 14/239 (5%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECE 1383
++ + A F LG G F +VY A A+K+ F Q ++A E E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVA 1442
+ +RH N+ ++ + LIL+Y P G++ + L + EQR I ++A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELA 123
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGY 1502
AL Y H S +IH D+KP N+LL + DFG + S ++T T+ Y
Sbjct: 124 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDY 177
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ PE + D++S G+L E L + P + E + VE + PD VT+
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 98/201 (48%), Gaps = 14/201 (6%)
Query: 750 NLIGAGSFGSVYKA--TLPYGMNVAIKVFNLQ---LDGAIKSFDAECEVLRRVRHRNLVK 804
+IGAG FG V LP + + + L+ + + F +E ++ + H N++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
+ + +I E+M GSL+ +L + + Q + ++ +A+ ++YL +
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN--- 129
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFG-----YMAPEYGSE 919
+H L N+L++ + V +SDFG+S+ L+ +D+ T T A G + APE
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLE-DDTSDPTYTSALGGKIPIRWTAPEAIQY 188
Query: 920 GIVSTCGDVYSFGILMIETFT 940
++ DV+S+GI+M E +
Sbjct: 189 RKFTSASDVWSYGIVMWEVMS 209
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 90/179 (50%), Gaps = 10/179 (5%)
Query: 1372 DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNI 1431
++ + F +E +M + H N+ + + +I ++M GSL+ +L ++ +
Sbjct: 49 EKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV 108
Query: 1432 EQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491
Q + ++ +A ++YL + +H L N+L++ ++V + DFG+++ L+ D+
Sbjct: 109 IQLVGMLRGIAAGMKYLA---DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLED-DTS 164
Query: 1492 KQTMTLA-----TIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTR-RKPTDDMFTGEV 1544
T T A I + APE +++ DV+S+GI+M E ++ +P DM +V
Sbjct: 165 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV 223
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 13/215 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRH 799
+ F +G G FG+VY A + A+KV F QL+ G E E+ +RH
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLH 858
N++++ + LILEY P G++ + L K + +QR I ++A+AL Y H
Sbjct: 65 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 122
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
VIH D+KP N+LL ++DFG S S +T T Y+ PE
Sbjct: 123 SKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIE 176
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ D++S G+L E K P + ET
Sbjct: 177 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 211
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 14/234 (5%)
Query: 1333 ATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECEVMRRI 1388
A F LG G F +VY A A+K+ F Q ++A E E+ +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVACALEY 1447
RH N+ ++ + LIL+Y P G++ + L + EQR I ++A AL Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSY 120
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
H S +IH D+KP N+LL + DFG + S ++T T+ Y+ PE
Sbjct: 121 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 174
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ D++S G+L E L + P + E + VE + PD VT+
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 228
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 11/214 (5%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYG-MNVAIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
D F +G G FG+VY A VA+KV ++ +G E E+ + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
N++++ + + LILEY P+G L K L T + Q+ IM ++A AL Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKEL-QKSCTFDEQRTATIMEELADALMYCH- 140
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
VIH D+KP N+LL ++DFG S S+ + T Y+ PE
Sbjct: 141 --GKKVIHRDIKPENLLLGLKGELKIADFGWSV---HAPSLRRKTMCGTLDYLPPEMIEG 195
Query: 920 GIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ + D++ G+L E P + ET
Sbjct: 196 RMHNEKVDLWCIGVLCYELLVGNPPFESASHNET 229
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 1335 NGFSESNLLGTGIFSSVYKATFADGTN-AAIKIF---SLQEDRALKSFDAECEVMRRIRH 1390
+ F LG G F +VY A A+K+ ++++ E E+ + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQ 1450
N+ ++ + + LIL+Y P+G L K L + + ++ IM ++A AL Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKEL-QKSCTFDEQRTATIMEELADALMYCH- 140
Query: 1451 GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSE 1510
+IH D+KP N+LL + DFG + S+++ T+ Y+ PE
Sbjct: 141 --GKKVIHRDIKPENLLLGLKGELKIADFGWSV---HAPSLRRKTMCGTLDYLPPEMIEG 195
Query: 1511 GIVSTSGDVYSFGILMMETLTRRKPTD 1537
+ + D++ G+L E L P +
Sbjct: 196 RMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 68.9 bits (167), Expect = 2e-11, Method: Composition-based stats.
Identities = 59/254 (23%), Positives = 116/254 (45%), Gaps = 23/254 (9%)
Query: 1329 ELRLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFSLQEDRALKS---FDAE 1381
E +A + S LG G F VY K D + I ++ E +++ F E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 1382 CEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS------HNYLL---NIE 1432
VM+ ++ +++ S +I++ M +G L+ +L S +N +L ++
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 1433 QRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492
+ + + ++A + YL+ + +H DL N + +D +GDFG+ + + D +
Sbjct: 126 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 1493 QT-MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE 1551
+ L + +M+PE +G+ +T DV+SFG+++ E T + + E L+ +E
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 242
Query: 1552 ESL---PDAVTDVI 1562
L PD D++
Sbjct: 243 GGLLDKPDNCPDML 256
Score = 57.8 bits (138), Expect = 4e-08, Method: Composition-based stats.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 749 SNLIGAGSFGSVYKATLPYGM-------NVAIKVFNLQLDGAIK-SFDAECEVLRRVRHR 800
S +G GSFG VY+ + G+ VAIK N + F E V++
Sbjct: 17 SRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL---------NIQQRLDIMIDVA 851
++V+++ S +I+E M +G L+ +L S + + ++ + + + ++A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFG 910
+ YL+ +H DL N + +D + DFG+++ + D + L
Sbjct: 136 DGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 911 YMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+M+PE +G+ +T DV+SFG+++ E T
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 41/225 (18%)
Query: 1337 FSESNLLGTGIFSSVYKATFADGT--NAAIKI--------FSLQEDRALKSFD-AECEVM 1385
+ +LG G+ SSV + T A+KI FS +E + L+ E +++
Sbjct: 6 YEPKEILGRGV-SSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 64
Query: 1386 RRIR-HRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQR--LDIMIDVA 1442
R++ H N+ ++ + F L+ M +G L +L L E R + +++V
Sbjct: 65 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 124
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGY 1502
CAL L +I+H DLKP N+LLDDDM L DFG + LD + +++ T Y
Sbjct: 125 CALHKL------NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE--VCGTPSY 176
Query: 1503 MAPE------------YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
+APE YG E D++S G++M L P
Sbjct: 177 LAPEIIECSMNDNHPGYGKE------VDMWSTGVIMYTLLAGSPP 215
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 25/159 (15%)
Query: 790 ECEVLRRVR-HRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI 848
E ++LR+V H N++++ + + F L+ + M +G L +L + K TL+ ++ IM
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIM- 117
Query: 849 DVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLAT 908
+ LE + H ++H DLKP N+LLDDD L+DFG S LD + + + T
Sbjct: 118 --RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE--VCGT 173
Query: 909 FGYMAPE------------YGSEGIVSTCGDVYSFGILM 935
Y+APE YG E D++S G++M
Sbjct: 174 PSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIM 206
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 2e-11, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 52/231 (22%)
Query: 1337 FSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLA- 1394
F E L+G+G F V+KA DG I+ ++A + E + + ++ H N+
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA----EREVKALAKLDHVNIVH 69
Query: 1395 -----------------KIVSSCSNP---------GFKALILQ--YMPQGSLEKWLYSHN 1426
+ SS +P K L +Q + +G+LE+W
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQW----- 124
Query: 1427 YLLNIEQRLDIMIDVACALEYLHQG-------YSTSIIHCDLKPSNVLLDDDMVAHLGDF 1479
IE+R +D ALE Q +S +IH DLKPSN+ L D +GDF
Sbjct: 125 ----IEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 1480 GIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETL 1530
G+ L + K+T + T+ YM+PE S D+Y+ G+++ E L
Sbjct: 181 GLVTSLK--NDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
Score = 60.1 bits (144), Expect = 9e-09, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 40/229 (17%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNLQLDGAIKSFDAECEVLRRVR 798
+R F E LIG+G FG V+KA G I+ + A + E + L ++
Sbjct: 8 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA----EREVKALAKLD 63
Query: 799 HRNLVKI---------------------------ISSCSNHGFKALI--LEYMPQGSLEK 829
H N+V + S K L +E+ +G+LE+
Sbjct: 64 HVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQ 123
Query: 830 WLYSHK-YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDF 888
W+ + L+ L++ + ++Y+H +IH DLKPSN+ L D + DF
Sbjct: 124 WIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 889 GISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
G+ L + +T + T YM+PE S D+Y+ G+++ E
Sbjct: 181 GLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 227
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.9 bits (167), Expect = 2e-11, Method: Composition-based stats.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 9/204 (4%)
Query: 1337 FSESNLLGTGIFSS-VYKATFADGTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRN 1392
F +LG G FS+ V A AIKI + ++ + E +VM R+ H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
K+ + + L Y G L K++ R ++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 147
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM-KQTMTLATIGYMAPEYGSEG 1511
IIH DLKP N+LL++DM + DFG AK+L + + T Y++PE +E
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
S D+++ G ++ + + P
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPP 231
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Query: 744 DGFSESNLIGAGSFGS-VYKATLPYGMNVAIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
+ F ++G GSF + V L AIK+ ++ + + E +V+ R+ H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
VK+ + + L Y G L K++ R ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHG 148
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT-LATFGYMAPEYGS 918
+IH DLKP N+LL++D ++DFG +K+L E + + T Y++PE +
Sbjct: 149 ---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 919 EGIVSTCGDVYSFGILMIE 937
E D+++ G ++ +
Sbjct: 206 EKSACKSSDLWALGCIIYQ 224
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI + MP G L ++ HK + Q L+ + +A + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG +KLL E+ +MA E
Sbjct: 143 RR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 236
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI Q MP G L ++ H + + L+ + +A +
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 137
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG AKLL + I +MA
Sbjct: 138 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 254
Query: 1564 ANLL 1567
++
Sbjct: 255 VYMI 258
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV--RHRNLVKIISS- 808
+G G +G V++ + G NVA+K+F+ + + KS+ E E+ V RH N++ I+S
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASD 100
Query: 809 -CSNHGFKAL--ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH------H 859
S H L I Y GSL +L TL+ L I++ +AS L +LH
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLD---GEDSVTQTMTLATFGYMAPEY 916
G P + H DLK N+L+ + ++D G++ + + V + T YMAPE
Sbjct: 159 GKPA-IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 217
Query: 917 GSEGIVSTCG------DVYSFGILMIETFTR 941
E I C D+++FG+++ E R
Sbjct: 218 LDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 36/215 (16%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRI--RHRNLAKIVSSC 1400
+G G + V++ ++ G N A+KIFS +++ KS+ E E+ + RH N+ ++S
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASD 100
Query: 1401 SNPGFKA----LILQYMPQGSLEKWLYSHNYL----LNIEQRLDIMIDVACALEYLH--- 1449
+ LI Y GSL ++YL L+ L I++ +A L +LH
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSL------YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 1450 ---QGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIG---YM 1503
QG +I H DLK N+L+ + + D G+A + + +G YM
Sbjct: 155 FGTQG-KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 1504 APEYGSEGI------VSTSGDVYSFGILMMETLTR 1532
APE E I D+++FG+++ E R
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI + MP G L ++ HK + Q L+ + +A + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG +KLL E+ +MA E
Sbjct: 138 RR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 231
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI Q MP G L ++ H + + L+ + +A +
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 132
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG AKLL + I +MA
Sbjct: 133 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 249
Query: 1564 ANLL 1567
++
Sbjct: 250 VYMI 253
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 16/224 (7%)
Query: 720 ILENDSLSLATWRRISYQELQRLTDGFSESNLIGAGSFGSVYKATL-----PYGMNVAIK 774
I E D+ ++ + R Q +R+ G IG G FG V++ P M VAIK
Sbjct: 371 IDEEDTYTMPSTRDYEIQR-ERIELG----RCIGEGQFGDVHQGIYMSPENP-AMAVAIK 424
Query: 775 VF-NLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYS 833
N D + F E +R+ H ++VK+I + + +I+E G L +L
Sbjct: 425 TCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQV 483
Query: 834 HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKL 893
K++L++ + +++AL YL +H D+ NVL+ + L DFG+S+
Sbjct: 484 RKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY 540
Query: 894 LDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
++ + +MAPE + ++ DV+ FG+ M E
Sbjct: 541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 584
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 90/194 (46%), Gaps = 11/194 (5%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIF-----SLQEDRALKSFDAECEVMRRIRHRNLAKIV 1397
+G G F V++ + N A+ + + D + F E MR+ H ++ K++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 1398 SSCS-NPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSI 1456
+ NP + +I++ G L +L + L++ + ++ AL YL S
Sbjct: 458 GVITENPVW--IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRF 512
Query: 1457 IHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTS 1516
+H D+ NVL+ + LGDFG+++ ++ K + I +MAPE + +++
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 572
Query: 1517 GDVYSFGILMMETL 1530
DV+ FG+ M E L
Sbjct: 573 SDVWMFGVCMWEIL 586
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 34/214 (15%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV--RHRNLVKIISS- 808
IG G FG V++ G VA+K+F+ + + +S+ E E+ + V RH N++ I++
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 809 -CSNHGFKALIL--EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH------H 859
N + L L +Y GSL +L ++YT+ ++ + + + AS L +LH
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 150
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA------TFGYMA 913
G P + H DLK N+L+ + ++D G++ DS T T+ +A T YMA
Sbjct: 151 GKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVR---HDSATDTIDIAPNHRVGTKRYMA 206
Query: 914 PEYGSEGI------VSTCGDVYSFGILMIETFTR 941
PE + I D+Y+ G++ E R
Sbjct: 207 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 240
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 34/214 (15%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRI--RHRNLAKIVSS- 1399
+G G F V++ + G A+KIFS +E+R S+ E E+ + + RH N+ +++
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAAD 92
Query: 1400 -CSNPGFKALIL--QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLH------Q 1450
N + L L Y GSL +L + Y + +E + + + A L +LH Q
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 150
Query: 1451 GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA------TIGYMA 1504
G +I H DLK N+L+ + + D G+A DS T+ +A T YMA
Sbjct: 151 G-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH---DSATDTIDIAPNHRVGTKRYMA 206
Query: 1505 PEYGSEGI------VSTSGDVYSFGILMMETLTR 1532
PE + I D+Y+ G++ E R
Sbjct: 207 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 240
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 34/214 (15%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV--RHRNLVKIISS- 808
IG G FG V++ G VA+K+F+ + + +S+ E E+ + V RH N++ I++
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 809 -CSNHGFKALIL--EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH------H 859
N + L L +Y GSL +L ++YT+ ++ + + + AS L +LH
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 163
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA------TFGYMA 913
G P + H DLK N+L+ + ++D G++ DS T T+ +A T YMA
Sbjct: 164 GKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVR---HDSATDTIDIAPNHRVGTKRYMA 219
Query: 914 PEYGSEGI------VSTCGDVYSFGILMIETFTR 941
PE + I D+Y+ G++ E R
Sbjct: 220 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 34/214 (15%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRI--RHRNLAKIVSS- 1399
+G G F V++ + G A+KIFS +E+R S+ E E+ + + RH N+ +++
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAAD 105
Query: 1400 -CSNPGFKALIL--QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLH------Q 1450
N + L L Y GSL +L + Y + +E + + + A L +LH Q
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 163
Query: 1451 GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA------TIGYMA 1504
G +I H DLK N+L+ + + D G+A DS T+ +A T YMA
Sbjct: 164 G-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH---DSATDTIDIAPNHRVGTKRYMA 219
Query: 1505 PEYGSEGI------VSTSGDVYSFGILMMETLTR 1532
PE + I D+Y+ G++ E R
Sbjct: 220 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 34/214 (15%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV--RHRNLVKIISS- 808
IG G FG V++ G VA+K+F+ + + +S+ E E+ + V RH N++ I++
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 809 -CSNHGFKALIL--EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH------H 859
N + L L +Y GSL +L ++YT+ ++ + + + AS L +LH
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 130
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA------TFGYMA 913
G P + H DLK N+L+ + ++D G++ DS T T+ +A T YMA
Sbjct: 131 GKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVR---HDSATDTIDIAPNHRVGTKRYMA 186
Query: 914 PEYGSEGI------VSTCGDVYSFGILMIETFTR 941
PE + I D+Y+ G++ E R
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 220
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 34/214 (15%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRI--RHRNLAKIVSS- 1399
+G G F V++ + G A+KIFS +E+R S+ E E+ + + RH N+ +++
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAAD 72
Query: 1400 -CSNPGFKALIL--QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLH------Q 1450
N + L L Y GSL +L + Y + +E + + + A L +LH Q
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 130
Query: 1451 GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA------TIGYMA 1504
G +I H DLK N+L+ + + D G+A DS T+ +A T YMA
Sbjct: 131 G-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH---DSATDTIDIAPNHRVGTKRYMA 186
Query: 1505 PEYGSEGI------VSTSGDVYSFGILMMETLTR 1532
PE + I D+Y+ G++ E R
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 220
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 68.6 bits (166), Expect = 3e-11, Method: Composition-based stats.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 30/213 (14%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G+FG VYKA G A KV + + ++ + E E+L H +VK++ +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 811 NHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+ G +++E+ P G+++ + L Q I + LE L+ H +IH DL
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 135
Query: 871 KPSNVLLDDDTVAHLSDFGIS----KLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTC- 925
K NVL+ + L+DFG+S K L DS + T +MAPE V C
Sbjct: 136 KAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF-----IGTPYWMAPE------VVMCE 184
Query: 926 ----------GDVYSFGILMIETFTRKMPTDEM 948
D++S GI +IE + P E+
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 217
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 30/221 (13%)
Query: 1343 LGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
LG G F VYKA + G AA K+ + + L+ + E E++ H + K++ +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 1402 NPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRL-DIMIDVAC-----ALEYLHQGYSTS 1455
+ G +++++ P G+++ +L +++ L + I V C AL +LH S
Sbjct: 79 HDGKLWIMIEFCPGGAVDA------IMLELDRGLTEPQIQVVCRQMLEALNFLH---SKR 129
Query: 1456 IIHCDLKPSNVLLDDDMVAHLGDFGIA----KLLDGVDSMKQTMTLATIGYMAPE-YGSE 1510
IIH DLK NVL+ + L DFG++ K L DS + T +MAPE E
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF-----IGTPYWMAPEVVMCE 184
Query: 1511 GIVST----SGDVYSFGILMMETLTRRKPTDDMFTGEVCLK 1547
+ T D++S GI ++E P ++ V LK
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK 225
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 68.6 bits (166), Expect = 3e-11, Method: Composition-based stats.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 30/213 (14%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G+FG VYKA G A KV + + ++ + E E+L H +VK++ +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 811 NHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+ G +++E+ P G+++ + L Q I + LE L+ H +IH DL
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 143
Query: 871 KPSNVLLDDDTVAHLSDFGIS----KLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTC- 925
K NVL+ + L+DFG+S K L DS + T +MAPE V C
Sbjct: 144 KAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF-----IGTPYWMAPE------VVMCE 192
Query: 926 ----------GDVYSFGILMIETFTRKMPTDEM 948
D++S GI +IE + P E+
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 225
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 30/221 (13%)
Query: 1343 LGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
LG G F VYKA + G AA K+ + + L+ + E E++ H + K++ +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 1402 NPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRL-DIMIDVAC-----ALEYLHQGYSTS 1455
+ G +++++ P G+++ +L +++ L + I V C AL +LH S
Sbjct: 87 HDGKLWIMIEFCPGGAVDA------IMLELDRGLTEPQIQVVCRQMLEALNFLH---SKR 137
Query: 1456 IIHCDLKPSNVLLDDDMVAHLGDFGIA----KLLDGVDSMKQTMTLATIGYMAPE-YGSE 1510
IIH DLK NVL+ + L DFG++ K L DS + T +MAPE E
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF-----IGTPYWMAPEVVMCE 192
Query: 1511 GIVST----SGDVYSFGILMMETLTRRKPTDDMFTGEVCLK 1547
+ T D++S GI ++E P ++ V LK
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK 233
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV--RHRNLVKIISS- 808
+G G +G V++ + G NVA+K+F+ + + KS+ E E+ V RH N++ I+S
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASD 71
Query: 809 -CSNHGFKAL--ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH------H 859
S H L I Y GSL +L TL+ L I++ +AS L +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLD---GEDSVTQTMTLATFGYMAPEY 916
G P + H DLK N+L+ + ++D G++ + + V + T YMAPE
Sbjct: 130 GKPA-IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 917 GSEGIVSTCG------DVYSFGILMIETFTR 941
E I C D+++FG+++ E R
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 36/215 (16%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRI--RHRNLAKIVSSC 1400
+G G + V++ ++ G N A+KIFS +++ KS+ E E+ + RH N+ ++S
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASD 71
Query: 1401 SNPGFKA----LILQYMPQGSLEKWLYSHNYL----LNIEQRLDIMIDVACALEYLH--- 1449
+ LI Y GSL ++YL L+ L I++ +A L +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSL------YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 1450 ---QGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIG---YM 1503
QG +I H DLK N+L+ + + D G+A + + +G YM
Sbjct: 126 FGTQG-KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 1504 APEYGSEGI------VSTSGDVYSFGILMMETLTR 1532
APE E I D+++FG+++ E R
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 34/214 (15%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV--RHRNLVKIISS- 808
IG G FG V++ G VA+K+F+ + + +S+ E E+ + V RH N++ I++
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 809 -CSNHGFKALIL--EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH------H 859
N + L L +Y GSL +L ++YT+ ++ + + + AS L +LH
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 127
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA------TFGYMA 913
G P + H DLK N+L+ + ++D G++ DS T T+ +A T YMA
Sbjct: 128 GKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVR---HDSATDTIDIAPNHRVGTKRYMA 183
Query: 914 PEYGSEGI------VSTCGDVYSFGILMIETFTR 941
PE + I D+Y+ G++ E R
Sbjct: 184 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 217
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 34/214 (15%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRI--RHRNLAKIVSS- 1399
+G G F V++ + G A+KIFS +E+R S+ E E+ + + RH N+ +++
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAAD 69
Query: 1400 -CSNPGFKALIL--QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLH------Q 1450
N + L L Y GSL +L + Y + +E + + + A L +LH Q
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 127
Query: 1451 GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA------TIGYMA 1504
G +I H DLK N+L+ + + D G+A DS T+ +A T YMA
Sbjct: 128 G-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH---DSATDTIDIAPNHRVGTKRYMA 183
Query: 1505 PEYGSEGI------VSTSGDVYSFGILMMETLTR 1532
PE + I D+Y+ G++ E R
Sbjct: 184 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 217
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 34/214 (15%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV--RHRNLVKIISS- 808
IG G FG V++ G VA+K+F+ + + +S+ E E+ + V RH N++ I++
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 809 -CSNHGFKALIL--EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH------H 859
N + L L +Y GSL +L ++YT+ ++ + + + AS L +LH
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 125
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA------TFGYMA 913
G P + H DLK N+L+ + ++D G++ DS T T+ +A T YMA
Sbjct: 126 GKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVR---HDSATDTIDIAPNHRVGTKRYMA 181
Query: 914 PEYGSEGI------VSTCGDVYSFGILMIETFTR 941
PE + I D+Y+ G++ E R
Sbjct: 182 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 215
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 34/214 (15%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRI--RHRNLAKIVSS- 1399
+G G F V++ + G A+KIFS +E+R S+ E E+ + + RH N+ +++
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAAD 67
Query: 1400 -CSNPGFKALIL--QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLH------Q 1450
N + L L Y GSL +L + Y + +E + + + A L +LH Q
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 125
Query: 1451 GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA------TIGYMA 1504
G +I H DLK N+L+ + + D G+A DS T+ +A T YMA
Sbjct: 126 G-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH---DSATDTIDIAPNHRVGTKRYMA 181
Query: 1505 PEYGSEGI------VSTSGDVYSFGILMMETLTR 1532
PE + I D+Y+ G++ E R
Sbjct: 182 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 215
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++G+G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI + MP G L ++ HK + Q L+ + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG +KLL E+ +MA E
Sbjct: 136 RR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 229
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +LG+G F +VYK + + + I L+E +A K E VM
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI Q MP G L ++ H + + L+ + +A +
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG AKLL + I +MA
Sbjct: 131 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 247
Query: 1564 ANLL 1567
++
Sbjct: 248 VYMI 251
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 34/214 (15%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV--RHRNLVKIISS- 808
IG G FG V++ G VA+K+F+ + + +S+ E E+ + V RH N++ I++
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 809 -CSNHGFKALIL--EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH------H 859
N + L L +Y GSL + Y ++YT+ ++ + + + AS L +LH
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSL--FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA------TFGYMA 913
G P + H DLK N+L+ + ++D G++ DS T T+ +A T YMA
Sbjct: 125 GKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVR---HDSATDTIDIAPNHRVGTKRYMA 180
Query: 914 PEYGSEGI------VSTCGDVYSFGILMIETFTR 941
PE + I D+Y+ G++ E R
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 34/214 (15%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRI--RHRNLAKIVSS- 1399
+G G F V++ + G A+KIFS +E+R S+ E E+ + + RH N+ +++
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAAD 66
Query: 1400 -CSNPGFKALIL--QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLH------Q 1450
N + L L Y GSL + Y + Y + +E + + + A L +LH Q
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSL--FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 1451 GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA------TIGYMA 1504
G +I H DLK N+L+ + + D G+A DS T+ +A T YMA
Sbjct: 125 G-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH---DSATDTIDIAPNHRVGTKRYMA 180
Query: 1505 PEYGSEGI------VSTSGDVYSFGILMMETLTR 1532
PE + I D+Y+ G++ E R
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV--RHRNLVKIISS- 808
+G G +G V++ + G NVA+K+F+ + + KS+ E E+ V RH N++ I+S
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASD 71
Query: 809 -CSNHGFKAL--ILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH------H 859
S H L I Y GSL +L TL+ L I++ +AS L +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLD---GEDSVTQTMTLATFGYMAPEY 916
G P + H DLK N+L+ + ++D G++ + + V + T YMAPE
Sbjct: 130 GKPA-IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 917 GSEGIVSTCG------DVYSFGILMIETFTR 941
E I C D+++FG+++ E R
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 36/215 (16%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRI--RHRNLAKIVSSC 1400
+G G + V++ ++ G N A+KIFS +++ KS+ E E+ + RH N+ ++S
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASD 71
Query: 1401 SNPGFKA----LILQYMPQGSLEKWLYSHNYL----LNIEQRLDIMIDVACALEYLH--- 1449
+ LI Y GSL ++YL L+ L I++ +A L +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSL------YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 1450 ---QGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIG---YM 1503
QG +I H DLK N+L+ + + D G+A + + +G YM
Sbjct: 126 FGTQG-KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 1504 APEYGSEGI------VSTSGDVYSFGILMMETLTR 1532
APE E I D+++FG+++ E R
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 13/215 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRH 799
+ F +G G FG+VY A + A+KV F QL+ G E E+ +RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLH 858
N++++ + LILEY P G++ + L K + +QR I ++A+AL Y H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 128
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
VIH D+KP N+LL ++DFG S S + T Y+ PE
Sbjct: 129 SKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEMIE 182
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ D++S G+L E K P + ET
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 14/234 (5%)
Query: 1333 ATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECEVMRRI 1388
A F LG G F +VY A A+K+ F Q ++A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVACALEY 1447
RH N+ ++ + LIL+Y P G++ + L + EQR I ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSY 126
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
H S +IH D+KP N+LL + DFG + S ++ T+ Y+ PE
Sbjct: 127 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEM 180
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ D++S G+L E L + P + E + VE + PD VT+
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 99/222 (44%), Gaps = 13/222 (5%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECE 792
++ Q + F +G G FG+VY A + A+KV F QL+ G E E
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVA 851
+ +RH N++++ + LILEY P G++ + L K + +QR I ++A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 120
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
+AL Y H VIH D+KP N+LL ++DFG S S + T Y
Sbjct: 121 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDY 174
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ PE + D++S G+L E K P + ET
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 216
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 14/239 (5%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECE 1383
++ + A F LG G F +VY A A+K+ F Q ++A E E
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVA 1442
+ +RH N+ ++ + LIL+Y P G++ + L + EQR I ++A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELA 120
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGY 1502
AL Y H S +IH D+KP N+LL + DFG + S ++ T+ Y
Sbjct: 121 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDY 174
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ PE + D++S G+L E L + P + E + VE + PD VT+
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 233
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 68.2 bits (165), Expect = 4e-11, Method: Composition-based stats.
Identities = 54/197 (27%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 752 IGAGSFGSVYKATLPYGM-----NVAIKVFNLQLDGA-IKSFDAECEVLRRVRHRNLVKI 805
+G G+FGSV + Y M +VAIKV + A + E +++ ++ + +V++
Sbjct: 18 LGCGNFGSVRQGV--YRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 75
Query: 806 ISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPV 865
I C L++E G L K+L + + + +++ V+ ++YL +
Sbjct: 76 IGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---F 131
Query: 866 IHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF--GYMAPEYGSEGIVS 923
+H DL NVLL + A +SDFG+SK L +DS + + + APE + S
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 924 TCGDVYSFGILMIETFT 940
+ DV+S+G+ M E +
Sbjct: 192 SRSDVWSYGVTMWEALS 208
Score = 63.2 bits (152), Expect = 1e-09, Method: Composition-based stats.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 11/209 (5%)
Query: 1343 LGTGIFSSVYKATF---ADGTNAAIKIFSLQEDRA-LKSFDAECEVMRRIRHRNLAKIVS 1398
LG G F SV + + + AIK+ ++A + E ++M ++ + + +++
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIH 1458
C L+++ G L K+L + + +++ V+ ++YL + + +H
Sbjct: 78 VCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVH 133
Query: 1459 CDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMAPEYGSEGIVSTS 1516
DL NVLL + A + DFG++K L DS + + + APE + S+
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 193
Query: 1517 GDVYSFGILMMETLTR-RKPTDDMFTGEV 1544
DV+S+G+ M E L+ +KP M EV
Sbjct: 194 SDVWSYGVTMWEALSYGQKPYKKMKGPEV 222
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A
Putative Auto-Inhibition State
Length = 340
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
Query: 1437 IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT 1496
I + + ALE+LH S+IH D+KPSNVL++ + DFGI+ L VDS+ +T+
Sbjct: 158 IAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTID 213
Query: 1497 LATIGYMAPEYGSEGI----VSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
YMAPE + + S D++S GI M+E R P D T LK VEE
Sbjct: 214 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE 273
Query: 1553 SLPDAVTDVIDANLLS 1568
P D A +
Sbjct: 274 PSPQLPADKFSAEFVD 289
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Query: 846 IMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT 905
I + + ALE+LH VIH D+KPSNVL++ + DFGIS L DSV +T+
Sbjct: 158 IAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTID 213
Query: 906 LATFGYMAPEYGSEGI----VSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEE 961
YMAPE + + S D++S GI MIE + P D T LK+ VEE
Sbjct: 214 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE 273
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 7/194 (3%)
Query: 752 IGAGSFGSVYKATLPY-GMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
IG GS G V AT + G VA+K +L+ + E ++R H N+V + SS
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 811 NHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+++E++ G+L + +H +N +Q + + V AL YLH+ VIH D+
Sbjct: 113 VGDELWVVMEFLEGGALTD-IVTHT-RMNEEQIATVCLSVLRALSYLHN---QGVIHRDI 167
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
K ++LL D LSDFG + E + + + T +MAPE S T D++S
Sbjct: 168 KSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXL-VGTPYWMAPEVISRLPYGTEVDIWS 226
Query: 931 FGILMIETFTRKMP 944
GI++IE + P
Sbjct: 227 LGIMVIEMIDGEPP 240
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 1359 GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSL 1418
G A+K L++ + + E +MR H N+ + SS ++++++ G+L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 1419 EKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGD 1478
+ +H + N EQ + + V AL YLH + +IH D+K ++LL D L D
Sbjct: 130 TD-IVTHTRM-NEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSD 184
Query: 1479 FGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDD 1538
FG + + K+ + T +MAPE S T D++S GI+++E + P
Sbjct: 185 FGFCAQVSK-EVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP--- 240
Query: 1539 MFTGEVCLK--HWVEESLPDAVTDV 1561
+ E L+ + +SLP V D+
Sbjct: 241 -YFNEPPLQAMRRIRDSLPPRVKDL 264
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 90/191 (47%), Gaps = 8/191 (4%)
Query: 747 SESNLIGAGSFGSVYK-ATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKI 805
S++ ++G G FG V+K G+ +A K+ + + E V+ ++ H NL+++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 806 ISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPV 865
+ + L++EY+ G L + Y L LD ++ + E + H H +
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLT---ELDTILFMKQICEGIRHMHQMYI 208
Query: 866 IHCDLKPSNVLL--DDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVS 923
+H DLKP N+L D + DFG+++ + + + T ++APE + VS
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL--KVNFGTPEFLAPEVVNYDFVS 266
Query: 924 TCGDVYSFGIL 934
D++S G++
Sbjct: 267 FPTDMWSVGVI 277
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 11/199 (5%)
Query: 1333 ATNGF---SESNLLGTGIFSSVYK-ATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRI 1388
A N F S++ +LG G F V+K A G A KI + + + E VM ++
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYL 1448
H NL ++ + + L+++Y+ G L + +Y L + M + + ++
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHM 203
Query: 1449 HQGYSTSIIHCDLKPSNVLL--DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE 1506
HQ Y I+H DLKP N+L D + DFG+A+ + +K + T ++APE
Sbjct: 204 HQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK--VNFGTPEFLAPE 258
Query: 1507 YGSEGIVSTSGDVYSFGIL 1525
+ VS D++S G++
Sbjct: 259 VVNYDFVSFPTDMWSVGVI 277
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 11/213 (5%)
Query: 1331 RLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALK---SFDAECEVMR 1386
R+ + + LG G F V G A+KI + Q+ R+L E + ++
Sbjct: 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK 71
Query: 1387 RIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALE 1446
RH ++ K+ S P ++++Y+ G L ++ + L E R + + ++
Sbjct: 72 LFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRR-LFQQILSGVD 130
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE 1506
Y H+ ++H DLKP NVLLD M A + DFG++ ++ + ++ + + Y APE
Sbjct: 131 YCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR--XSCGSPNYAAPE 185
Query: 1507 YGSEGIVS-TSGDVYSFGILMMETLTRRKPTDD 1538
S + + D++S G+++ L P DD
Sbjct: 186 VISGRLYAGPEVDIWSSGVILYALLCGTLPFDD 218
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 750 NLIGAGSFGSVY--KATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV------RHRN 801
+ +G G+FG V K L G VA+K+ N Q I+S D ++ R + RH +
Sbjct: 22 DTLGVGTFGKVKVGKHELT-GHKVAVKILNRQ---KIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 802 LVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGH 861
++K+ S +++EY+ G L ++ + L+ ++ + + S ++Y H
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCHRHM 136
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL-DGEDSVTQTMTLATFGYMAPEYGSEG 920
V+H DLKP NVLLD A ++DFG+S ++ DGE + + Y APE S
Sbjct: 137 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRXSCGSPNYAAPEVISGR 190
Query: 921 IVSTCG-DVYSFGILMIETFTRKMPTDE 947
+ + D++S G+++ +P D+
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFDD 218
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 100/222 (45%), Gaps = 13/222 (5%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECE 792
++ Q + F +G G FG+VY A + A+KV F QL+ G E E
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVA 851
+ +RH N++++ + LILEY P G++ + L K + +QR I ++A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 120
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
+AL Y H VIH D+KP N+LL +++FG S S +T T Y
Sbjct: 121 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTLDY 174
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ PE + D++S G+L E K P + ET
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 216
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 14/239 (5%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECE 1383
++ + A F LG G F +VY A A+K+ F Q ++A E E
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVA 1442
+ +RH N+ ++ + LIL+Y P G++ + L + EQR I ++A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELA 120
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGY 1502
AL Y H S +IH D+KP N+LL + +FG + S ++T T+ Y
Sbjct: 121 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTLDY 174
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ PE + D++S G+L E L + P + E + VE + PD VT+
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 233
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122)
Length = 677
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAEC---EVMRRIRHRNLAKIVSS 1399
LGTG F V + D T + I +++ + K+ + C ++M+++ H N +VS+
Sbjct: 23 LGTGGFGYVLRWIHQD-TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPN---VVSA 78
Query: 1400 CSNP-GFKALI--------LQYMPQGSLEKWLYSHNYLLNIEQR--LDIMIDVACALEYL 1448
P G + L ++Y G L K+L +++ ++ D++ AL YL
Sbjct: 79 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 138
Query: 1449 HQGYSTSIIHCDLKPSNVLLD---DDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
H+ IIH DLKP N++L ++ + D G AK LD + T + T+ Y+AP
Sbjct: 139 HE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC--TEFVGTLQYLAP 193
Query: 1506 EYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
E + + + D +SFG L E +T +P
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKS-FDAECEVLRRVRHRNLVKI---- 805
+G G FG V + G VAIK +L + + E ++++++ H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 806 --ISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQR--LDIMIDVASALEYLHHGH 861
+ + + L +EY G L K+L + +++ ++ D++SAL YLH
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 142
Query: 862 PTPVIHCDLKPSNVLLD---DDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
+IH DLKP N++L + + D G +K LD + T+ + T Y+APE
Sbjct: 143 ---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE--FVGTLQYLAPELLE 197
Query: 919 EGIVSTCGDVYSFGILMIETFT 940
+ + D +SFG L E T
Sbjct: 198 QKKYTVTVDYWSFGTLAFECIT 219
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAEC---EVMRRIRHRNLAKIVSS 1399
LGTG F V + D T + I +++ + K+ + C ++M+++ H N +VS+
Sbjct: 22 LGTGGFGYVLRWIHQD-TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPN---VVSA 77
Query: 1400 CSNP-GFKALI--------LQYMPQGSLEKWLYSHNYLLNIEQR--LDIMIDVACALEYL 1448
P G + L ++Y G L K+L +++ ++ D++ AL YL
Sbjct: 78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 137
Query: 1449 HQGYSTSIIHCDLKPSNVLLD---DDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
H+ IIH DLKP N++L ++ + D G AK LD + T + T+ Y+AP
Sbjct: 138 HE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC--TEFVGTLQYLAP 192
Query: 1506 EYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
E + + + D +SFG L E +T +P
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKS-FDAECEVLRRVRHRNLVKI---- 805
+G G FG V + G VAIK +L + + E ++++++ H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 806 --ISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQR--LDIMIDVASALEYLHHGH 861
+ + + L +EY G L K+L + +++ ++ D++SAL YLH
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 141
Query: 862 PTPVIHCDLKPSNVLLD---DDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
+IH DLKP N++L + + D G +K LD + T+ + T Y+APE
Sbjct: 142 ---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE--FVGTLQYLAPELLE 196
Query: 919 EGIVSTCGDVYSFGILMIETFT 940
+ + D +SFG L E T
Sbjct: 197 QKKYTVTVDYWSFGTLAFECIT 218
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 100/222 (45%), Gaps = 13/222 (5%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECE 792
++ Q + F +G G FG+VY A + A+KV F QL+ G E E
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVA 851
+ +RH N++++ + LILEY P G++ + L K + +QR I ++A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 121
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
+AL Y H VIH D+KP N+LL +++FG S S +T T Y
Sbjct: 122 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTLDY 175
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ PE + D++S G+L E K P + ET
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 14/239 (5%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECE 1383
++ + A F LG G F +VY A A+K+ F Q ++A E E
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVA 1442
+ +RH N+ ++ + LIL+Y P G++ + L + EQR I ++A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELA 121
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGY 1502
AL Y H S +IH D+KP N+LL + +FG + S ++T T+ Y
Sbjct: 122 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTLDY 175
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ PE + D++S G+L E L + P + E + VE + PD VT+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.8 bits (164), Expect = 4e-11, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 748 ESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIK-SFDAECEVLRRVRHRNL 802
E +G+G+FG+V Y+ + N D A+K AE V++++ + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
V++I C + L++E G L K+L +++ + + ++++ V+ ++YL +
Sbjct: 75 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN- 131
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF--GYMAPEYGSEG 920
+H DL NVLL A +SDFG+SK L +++ + T + + APE +
Sbjct: 132 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYY 189
Query: 921 IVSTCGDVYSFGILMIETFT 940
S+ DV+SFG+LM E F+
Sbjct: 190 KFSSKSDVWSFGVLMWEAFS 209
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 1339 ESNLLGTGIFSSVYKATFADGTNAAIKIFSL----QEDRALK-SFDAECEVMRRIRHRNL 1393
E LG+G F +V K + + D ALK AE VM+++ + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
+++ C + L+++ G L K+L + ++ + + ++++ V+ ++YL +
Sbjct: 75 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEE--- 129
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMAPEYGSEG 1511
++ +H DL NVLL A + DFG++K L ++ + T + + APE +
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYY 189
Query: 1512 IVSTSGDVYSFGILMMETLTR-RKPTDDMFTGEV 1544
S+ DV+SFG+LM E + +KP M EV
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 67.8 bits (164), Expect = 5e-11, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 748 ESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIK-SFDAECEVLRRVRHRNL 802
E +G+G+FG+V Y+ + N D A+K AE V++++ + +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
V++I C + L++E G L K+L +++ + + ++++ V+ ++YL +
Sbjct: 81 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN- 137
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF--GYMAPEYGSEG 920
+H DL NVLL A +SDFG+SK L +++ + T + + APE +
Sbjct: 138 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 195
Query: 921 IVSTCGDVYSFGILMIETFT 940
S+ DV+SFG+LM E F+
Sbjct: 196 KFSSKSDVWSFGVLMWEAFS 215
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 60/233 (25%), Positives = 110/233 (47%), Gaps = 14/233 (6%)
Query: 1321 ALRRISYQELRLATNGFS-ESNLLGTGIFSSVYKATFADGTNAAIKIFSL----QEDRAL 1375
AL I +E+ L + E LG+G F +V K + + D AL
Sbjct: 2 ALEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 61
Query: 1376 K-SFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQR 1434
K AE VM+++ + + +++ C + L+++ G L K+L + ++ + +
Sbjct: 62 KDELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNI 119
Query: 1435 LDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQT 1494
++++ V+ ++YL + ++ +H DL NVLL A + DFG++K L ++ +
Sbjct: 120 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 176
Query: 1495 MTLAT--IGYMAPEYGSEGIVSTSGDVYSFGILMMETLTR-RKPTDDMFTGEV 1544
T + + APE + S+ DV+SFG+LM E + +KP M EV
Sbjct: 177 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 229
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 67.8 bits (164), Expect = 5e-11, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 748 ESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIK-SFDAECEVLRRVRHRNL 802
E +G+G+FG+V Y+ + N D A+K AE V++++ + +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
V++I C + L++E G L K+L +++ + + ++++ V+ ++YL +
Sbjct: 69 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN- 125
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF--GYMAPEYGSEG 920
+H DL NVLL A +SDFG+SK L +++ + T + + APE +
Sbjct: 126 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 921 IVSTCGDVYSFGILMIETFT 940
S+ DV+SFG+LM E F+
Sbjct: 184 KFSSKSDVWSFGVLMWEAFS 203
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 1339 ESNLLGTGIFSSVYKATFADGTNAAIKIFSL----QEDRALK-SFDAECEVMRRIRHRNL 1393
E LG+G F +V K + + D ALK AE VM+++ + +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
+++ C + L+++ G L K+L + ++ + + ++++ V+ ++YL +
Sbjct: 69 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEE--- 123
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMAPEYGSEG 1511
++ +H DL NVLL A + DFG++K L ++ + T + + APE +
Sbjct: 124 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 1512 IVSTSGDVYSFGILMMETLTR-RKPTDDMFTGEV 1544
S+ DV+SFG+LM E + +KP M EV
Sbjct: 184 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 217
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 67.8 bits (164), Expect = 5e-11, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 748 ESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIK-SFDAECEVLRRVRHRNL 802
E +G+G+FG+V Y+ + N D A+K AE V++++ + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
V++I C + L++E G L K+L +++ + + ++++ V+ ++YL +
Sbjct: 71 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN- 127
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF--GYMAPEYGSEG 920
+H DL NVLL A +SDFG+SK L +++ + T + + APE +
Sbjct: 128 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 921 IVSTCGDVYSFGILMIETFT 940
S+ DV+SFG+LM E F+
Sbjct: 186 KFSSKSDVWSFGVLMWEAFS 205
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 1339 ESNLLGTGIFSSVYKATFADGTNAAIKIFSL----QEDRALK-SFDAECEVMRRIRHRNL 1393
E LG+G F +V K + + D ALK AE VM+++ + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
+++ C + L+++ G L K+L + ++ + + ++++ V+ ++YL +
Sbjct: 71 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEE--- 125
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMAPEYGSEG 1511
++ +H DL NVLL A + DFG++K L ++ + T + + APE +
Sbjct: 126 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 1512 IVSTSGDVYSFGILMMETLTR-RKPTDDMFTGEV 1544
S+ DV+SFG+LM E + +KP M EV
Sbjct: 186 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 219
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.8 bits (164), Expect = 5e-11, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 748 ESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIK-SFDAECEVLRRVRHRNL 802
E +G+G+FG+V Y+ + N D A+K AE V++++ + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
V++I C + L++E G L K+L +++ + + ++++ V+ ++YL +
Sbjct: 75 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN- 131
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF--GYMAPEYGSEG 920
+H DL NVLL A +SDFG+SK L +++ + T + + APE +
Sbjct: 132 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 921 IVSTCGDVYSFGILMIETFT 940
S+ DV+SFG+LM E F+
Sbjct: 190 KFSSKSDVWSFGVLMWEAFS 209
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 1339 ESNLLGTGIFSSVYKATFADGTNAAIKIFSL----QEDRALK-SFDAECEVMRRIRHRNL 1393
E LG+G F +V K + + D ALK AE VM+++ + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
+++ C + L+++ G L K+L + ++ + + ++++ V+ ++YL +
Sbjct: 75 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEE--- 129
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMAPEYGSEG 1511
++ +H DL NVLL A + DFG++K L ++ + T + + APE +
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 1512 IVSTSGDVYSFGILMMETLTR-RKPTDDMFTGEV 1544
S+ DV+SFG+LM E + +KP M EV
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.8 bits (164), Expect = 5e-11, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 748 ESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIK-SFDAECEVLRRVRHRNL 802
E +G+G+FG+V Y+ + N D A+K AE V++++ + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
V++I C + L++E G L K+L +++ + + ++++ V+ ++YL +
Sbjct: 91 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN- 147
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF--GYMAPEYGSEG 920
+H DL NVLL A +SDFG+SK L +++ + T + + APE +
Sbjct: 148 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 921 IVSTCGDVYSFGILMIETFT 940
S+ DV+SFG+LM E F+
Sbjct: 206 KFSSKSDVWSFGVLMWEAFS 225
Score = 62.0 bits (149), Expect = 3e-09, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 1339 ESNLLGTGIFSSVYKATFADGTNAAIKIFSL----QEDRALK-SFDAECEVMRRIRHRNL 1393
E LG+G F +V K + + D ALK AE VM+++ + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
+++ C + L+++ G L K+L + ++ + + ++++ V+ ++YL +
Sbjct: 91 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEE--- 145
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMAPEYGSEG 1511
++ +H DL NVLL A + DFG++K L ++ + T + + APE +
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 1512 IVSTSGDVYSFGILMMETLTR-RKPTDDMFTGEV 1544
S+ DV+SFG+LM E + +KP M EV
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.8 bits (164), Expect = 5e-11, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 748 ESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIK-SFDAECEVLRRVRHRNL 802
E +G+G+FG+V Y+ + N D A+K AE V++++ + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
V++I C + L++E G L K+L +++ + + ++++ V+ ++YL +
Sbjct: 91 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN- 147
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF--GYMAPEYGSEG 920
+H DL NVLL A +SDFG+SK L +++ + T + + APE +
Sbjct: 148 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 921 IVSTCGDVYSFGILMIETFT 940
S+ DV+SFG+LM E F+
Sbjct: 206 KFSSKSDVWSFGVLMWEAFS 225
Score = 62.0 bits (149), Expect = 3e-09, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 1339 ESNLLGTGIFSSVYKATFADGTNAAIKIFSL----QEDRALK-SFDAECEVMRRIRHRNL 1393
E LG+G F +V K + + D ALK AE VM+++ + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
+++ C + L+++ G L K+L + ++ + + ++++ V+ ++YL +
Sbjct: 91 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEE--- 145
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMAPEYGSEG 1511
++ +H DL NVLL A + DFG++K L ++ + T + + APE +
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 1512 IVSTSGDVYSFGILMMETLTR-RKPTDDMFTGEV 1544
S+ DV+SFG+LM E + +KP M EV
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 742 LTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVR 798
+TD + +G G+F V + +P G A K+ N + A + + E + R ++
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 799 HRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH 858
H N+V++ S S GF L+ + + G L + + + +Y D + LE ++
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYY----SEADASHCIQQILESVN 117
Query: 859 HGHPTPVIHCDLKPSNVLLDDDT---VAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H ++H DLKP N+LL + L+DFG++ + G D T GY++PE
Sbjct: 118 HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG-DQQAWFGFAGTPGYLSPE 176
Query: 916 YGSEGIVSTCGDVYSFGILM 935
+ D+++ G+++
Sbjct: 177 VLRKDPYGKPVDMWACGVIL 196
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 11/190 (5%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSS 1399
LG G FS V + G A KI + ++ R + + E + R ++H N+ ++ S
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
S GF L+ + G L + + + Y D + LE ++ + I+H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYY----SEADASHCIQQILESVNHCHLNGIVHR 127
Query: 1460 DLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTS 1516
DLKP N+LL L DFG+A + G D T GY++PE +
Sbjct: 128 DLKPENLLLASKSKGAAVKLADFGLAIEVQG-DQQAWFGFAGTPGYLSPEVLRKDPYGKP 186
Query: 1517 GDVYSFGILM 1526
D+++ G+++
Sbjct: 187 VDMWACGVIL 196
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 67.8 bits (164), Expect = 5e-11, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 748 ESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIK-SFDAECEVLRRVRHRNL 802
E +G+G+FG+V Y+ + N D A+K AE V++++ + +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
V++I C + L++E G L K+L +++ + + ++++ V+ ++YL +
Sbjct: 89 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN- 145
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF--GYMAPEYGSEG 920
+H DL NVLL A +SDFG+SK L +++ + T + + APE +
Sbjct: 146 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 203
Query: 921 IVSTCGDVYSFGILMIETFT 940
S+ DV+SFG+LM E F+
Sbjct: 204 KFSSKSDVWSFGVLMWEAFS 223
Score = 62.0 bits (149), Expect = 3e-09, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 1339 ESNLLGTGIFSSVYKATFADGTNAAIKIFSL----QEDRALK-SFDAECEVMRRIRHRNL 1393
E LG+G F +V K + + D ALK AE VM+++ + +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
+++ C + L+++ G L K+L + ++ + + ++++ V+ ++YL +
Sbjct: 89 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEE--- 143
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMAPEYGSEG 1511
++ +H DL NVLL A + DFG++K L ++ + T + + APE +
Sbjct: 144 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 203
Query: 1512 IVSTSGDVYSFGILMMETLTR-RKPTDDMFTGEV 1544
S+ DV+SFG+LM E + +KP M EV
Sbjct: 204 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 237
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++ +G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI + MP G L ++ HK + Q L+ + +A + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 143 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 236
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 104/244 (42%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +L +G F +VYK + + + I L+E +A K E VM
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI Q MP G L ++ H + + L+ + +A +
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 137
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 138 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 254
Query: 1564 ANLL 1567
++
Sbjct: 255 VYMI 258
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 13/215 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRH 799
+ F +G G FG+VY A + A+KV F QL+ G E E+ +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLH 858
N++++ + LILEY P G++ + L K + +QR I ++A+AL Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 125
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
VIH D+KP N+LL ++DFG S S + T Y+ PE
Sbjct: 126 SKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLPPEMIE 179
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ D++S G+L E K P + ET
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 14/234 (5%)
Query: 1333 ATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECEVMRRI 1388
A F LG G F +VY A A+K+ F Q ++A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVACALEY 1447
RH N+ ++ + LIL+Y P G++ + L + EQR I ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSY 123
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
H S +IH D+KP N+LL + DFG + S ++ T+ Y+ PE
Sbjct: 124 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLPPEM 177
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ D++S G+L E L + P + E + VE + PD VT+
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.8 bits (164), Expect = 5e-11, Method: Composition-based stats.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 752 IGAGSFGSVYKATLPY-GMNVAIKVFNLQ--LDGAIKSFDAECEVLRRVR---HRNLVKI 805
IG G++G+VYKA P+ G VA+K + +G S E +LRR+ H N+V++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 806 ISSCSNHGFK-----ALILEYMPQGSLEKWL-YSHKYTLNIQQRLDIMIDVASALEYLHH 859
+ C+ L+ E++ Q L +L + L + D+M L++LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH- 129
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
++H DLKP N+L+ L+DFG++++ + ++ + T Y APE +
Sbjct: 130 --ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV--TLWYRAPEVLLQ 185
Query: 920 GIVSTCGDVYSFGILMIETFTRK 942
+T D++S G + E F RK
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRK 208
Score = 57.0 bits (136), Expect = 8e-08, Method: Composition-based stats.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 19/216 (8%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ--EDRALKSFDAECEVMRRI 1388
+AT+ + +G G + +VYKA G A+K + E+ S E ++RR+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 1389 R---HRNLAKIVSSCSNPGFK-----ALILQYMPQGSLEKWL-YSHNYLLNIEQRLDIMI 1439
H N+ +++ C+ L+ +++ Q L +L + L E D+M
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMR 119
Query: 1440 DVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT 1499
L++LH + I+H DLKP N+L+ L DFG+A++ M + T
Sbjct: 120 QFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY--QMALAPVVVT 174
Query: 1500 IGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
+ Y APE + +T D++S G + E + RRKP
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAE-MFRRKP 209
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 8/195 (4%)
Query: 752 IGAGSFG-SVYKATLPYGMNVAIKVFNLQLDGAIKSFDA--ECEVLRRVRHRNLVKIISS 808
IG GSFG ++ + G IK N+ + + ++ E VL ++H N+V+ S
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 809 CSNHGFKALILEYMPQGSLEKWLYSHKYTL-NIQQRLDIMIDVASALEYLHHGHPTPVIH 867
+G ++++Y G L K + + K L Q LD + + AL+ H H ++H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK---HVHDRKILH 148
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
D+K N+ L D L DFGI+++L+ + + + T Y++PE + D
Sbjct: 149 RDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA-CIGTPYYLSPEICENKPYNNKSD 207
Query: 928 VYSFGILMIETFTRK 942
+++ G ++ E T K
Sbjct: 208 IWALGCVLYELCTLK 222
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 8/193 (4%)
Query: 1343 LGTGIF-SSVYKATFADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G G F ++ + DG IK ++ + + E V+ ++H N+ + S
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHN-YLLNIEQRLDIMIDVACALEYLHQGYSTSIIH 1458
G +++ Y G L K + + L +Q LD + + AL+++H I+H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILH 148
Query: 1459 CDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGD 1518
D+K N+ L D LGDFGIA++L+ + + + T Y++PE + D
Sbjct: 149 RDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA-CIGTPYYLSPEICENKPYNNKSD 207
Query: 1519 VYSFGILMMETLT 1531
+++ G ++ E T
Sbjct: 208 IWALGCVLYELCT 220
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 1341 NLLGTGIFSSVYKATFADGTNAAIKIFSLQ---------EDRALKSFDAECEVMRRIRHR 1391
+LG G + V++ G N KIF+++ + AE ++ ++H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTG-KIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 1392 NLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVAC-------- 1443
+ ++ + G LIL+Y+ G L + +E+ M D AC
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGEL---------FMQLEREGIFMEDTACFYLAEISM 132
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK--LLDGVDSMKQTMTLATIG 1501
AL +LHQ II+ DLKP N++L+ L DFG+ K + DG + TI
Sbjct: 133 ALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH---XFCGTIE 186
Query: 1502 YMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGE 1543
YMAPE + + D +S G LM + LT P FTGE
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP----FTGE 224
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 20/224 (8%)
Query: 750 NLIGAGSFGSVYKATLPYGMNVAIKVFNLQ-LDGAI--------KSFDAECEVLRRVRHR 800
++G G +G V++ G N K+F ++ L A+ AE +L V+H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTG-KIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG 860
+V +I + G LILEY+ G L L + + +++ AL +LH
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLHQ- 139
Query: 861 HPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEG 920
+I+ DLKP N++L+ L+DFG+ K + +VT T YMAPE
Sbjct: 140 --KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFC-GTIEYMAPEILMRS 196
Query: 921 IVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLR 964
+ D +S G LM + T P FTGE KK +++ L+
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPP----FTGENR-KKTIDKILK 235
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 14/218 (6%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI-----KSFDAECEVLRRVRH 799
F + ++ +G+FG+VYK +P G V I V +L A K E V+ V +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
++ +++ C + LI + MP G L ++ HK + Q L+ + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGS 918
++H DL NVL+ ++DFG++KLL E+ +MA E
Sbjct: 136 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 919 EGIVSTCGDVYSFGILMIE--TFTRKMPTDEMFTGETS 954
I + DV+S+G+ + E TF K P D + E S
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEIS 229
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 104/244 (42%), Gaps = 12/244 (4%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATF---ADGTNAAIKIFSLQE---DRALKSFDAECEVM 1385
L F + +L +G F +VYK + + + I L+E +A K E VM
Sbjct: 12 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 1386 RRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
+ + ++ +++ C + LI Q MP G L ++ H + + L+ + +A +
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMA 1504
YL ++H DL NVL+ + DFG+AKLL + I +MA
Sbjct: 131 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
E I + DV+S+G+ + E +T KP D + E+ E LP ID
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 247
Query: 1564 ANLL 1567
++
Sbjct: 248 VYMI 251
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 13/215 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRH 799
+ F +G G FG+VY A + A+KV F QL+ G E E+ +RH
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLH 858
N++++ + LILEY P G++ + L K + +QR I ++A+AL Y H
Sbjct: 94 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 151
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
VIH D+KP N+LL ++DFG S S + T Y+ PE
Sbjct: 152 SKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTLDYLPPEMIE 205
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ D++S G+L E K P + ET
Sbjct: 206 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 240
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 14/239 (5%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECE 1383
++ + A F LG G F +VY A A+K+ F Q ++A E E
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVA 1442
+ +RH N+ ++ + LIL+Y P G++ + L + EQR I ++A
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELA 144
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGY 1502
AL Y H S +IH D+KP N+LL + DFG + S ++ T+ Y
Sbjct: 145 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTLDY 198
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ PE + D++S G+L E L + P + E + VE + PD VT+
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 257
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 742 LTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVR 798
+TD + +G G+F V + +P G A K+ N + A + + E + R ++
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 799 HRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH 858
H N+V++ S S GF L+ + + G L + + + +Y D + LE ++
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYY----SEADASHCIQQILESVN 117
Query: 859 HGHPTPVIHCDLKPSNVLLDDDT---VAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H ++H DLKP N+LL + L+DFG++ + G D T GY++PE
Sbjct: 118 HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG-DQQAWFGFAGTPGYLSPE 176
Query: 916 YGSEGIVSTCGDVYSFGILM 935
+ D+++ G+++
Sbjct: 177 VLRKDPYGKPVDMWACGVIL 196
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 1334 TNGFSESNLLGTGIFSSVYKA-TFADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRH 1390
T+ + LG G FS V + G A KI + ++ R + + E + R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQ 1450
N+ ++ S S GF L+ + G L + + + Y D + LE ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYY----SEADASHCIQQILESVNH 118
Query: 1451 GYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
+ I+H DLKP N+LL L DFG+A + G D T GY++PE
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG-DQQAWFGFAGTPGYLSPEV 177
Query: 1508 GSEGIVSTSGDVYSFGILM 1526
+ D+++ G+++
Sbjct: 178 LRKDPYGKPVDMWACGVIL 196
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 752 IGAGSFGSVYKATLPYGM-----NVAIKVFNLQLDGA-IKSFDAECEVLRRVRHRNLVKI 805
+G G+FGSV + Y M +VAIKV + A + E +++ ++ + +V++
Sbjct: 344 LGCGNFGSVRQGV--YRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 401
Query: 806 ISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPV 865
I C L++E G L K+L + + + +++ V+ ++YL +
Sbjct: 402 IGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---F 457
Query: 866 IHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF--GYMAPEYGSEGIVS 923
+H +L NVLL + A +SDFG+SK L +DS + + + APE + S
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 924 TCGDVYSFGILMIETFT 940
+ DV+S+G+ M E +
Sbjct: 518 SRSDVWSYGVTMWEALS 534
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 97/209 (46%), Gaps = 11/209 (5%)
Query: 1343 LGTGIFSSVYKATF---ADGTNAAIKIFSLQEDRA-LKSFDAECEVMRRIRHRNLAKIVS 1398
LG G F SV + + + AIK+ ++A + E ++M ++ + + +++
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIH 1458
C L+++ G L K+L + + +++ V+ ++YL + + +H
Sbjct: 404 VCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVH 459
Query: 1459 CDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT--IGYMAPEYGSEGIVSTS 1516
+L NVLL + A + DFG++K L DS + + + APE + S+
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 519
Query: 1517 GDVYSFGILMMETLTR-RKPTDDMFTGEV 1544
DV+S+G+ M E L+ +KP M EV
Sbjct: 520 SDVWSYGVTMWEALSYGQKPYKKMKGPEV 548
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 10/190 (5%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSC 809
IG G++G VYKA YG A+K L+ + G + E +L+ ++H N+VK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
L+ E++ Q L+K L + L ++ + + + Y H V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRD 125
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YGSEGIVSTCGD 927
LKP N+L++ + ++DFG+++ G T + T Y AP+ GS+ ST D
Sbjct: 126 LKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIVTLWYRAPDVLMGSKK-YSTTID 183
Query: 928 VYSFGILMIE 937
++S G + E
Sbjct: 184 IWSVGCIFAE 193
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNLAKIVSSC 1400
+G G + VYKA G A+K L+ ED + S E +++ ++H N+ K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
L+ +++ Q L+K L L ++ + + Y H ++H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--YGSEGIVSTSGD 1518
LKP N+L++ + + DFG+A+ G+ K T + T+ Y AP+ GS+ ST+ D
Sbjct: 126 LKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIVTLWYRAPDVLMGSKK-YSTTID 183
Query: 1519 VYSFGILMMETL 1530
++S G + E +
Sbjct: 184 IWSVGCIFAEMV 195
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 181
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 182 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 216
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 121
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--Y 1507
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILL 180
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 181 GCK-YYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 180
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 181 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 215
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 120
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--Y 1507
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILL 179
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 180 GCK-YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 179
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 180 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 214
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 119
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--Y 1507
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILL 178
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 179 GCK-YYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An Arylamide
Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKAT-FADGTNAAIKIFSLQEDRALKSFDAECEVMR 1386
++ N LG G F V +AT F G A+ +++ ++ D + +M
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 1387 RIR-------HRNLAKIVSSCSNPGFKALILQYMPQGSLEKWL---------YSHNYLLN 1430
++ H N+ ++ +C++ G +I +Y G L +L YS+N N
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHN 158
Query: 1431 IEQRL---DIM---IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK- 1483
E++L D++ VA + +L S + IH D+ NVLL + VA +GDFG+A+
Sbjct: 159 PEEQLSSRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 215
Query: 1484 LLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+++ + + + + +MAPE + + + DV+S+GIL+ E +
Sbjct: 216 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 109/214 (50%), Gaps = 29/214 (13%)
Query: 752 IGAGSFGSVYKATLPYGM-------NVAIKVFNLQLDGAIK-SFDAECEVLRRV-RHRNL 802
+GAG+FG V +AT +G+ VA+K+ K + +E +++ + +H N+
Sbjct: 54 LGAGAFGKVVEATA-FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWL---------YSHKYTLNIQQRL---DIM--- 847
V ++ +C++ G +I EY G L +L YS+ + N +++L D++
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFS 172
Query: 848 IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTMTL 906
VA + +L + IH D+ NVLL + VA + DFG+++ +++ + + +
Sbjct: 173 SQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 229
Query: 907 ATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+MAPE + + + DV+S+GIL+ E F+
Sbjct: 230 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY--G 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 179
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 180 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 214
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 119
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY-- 1507
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILL 178
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 179 GCK-YYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 99/222 (44%), Gaps = 13/222 (5%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECE 792
++ Q + F +G G FG+VY A + A+KV F QL+ G E E
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVA 851
+ +RH N++++ + LILEY P G++ + L K + +QR I ++A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 121
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
+AL Y H VIH D+KP N+LL ++DFG S S + T Y
Sbjct: 122 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDY 175
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ PE + D++S G+L E K P + ET
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 14/234 (5%)
Query: 1333 ATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECEVMRRI 1388
A F LG G F +VY A A+K+ F Q ++A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVACALEY 1447
RH N+ ++ + LIL+Y P G++ + L + EQR I ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSY 126
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
H S +IH D+KP N+LL + DFG + S ++ T+ Y+ PE
Sbjct: 127 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLPPEM 180
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ D++S G+L E L + P + E + VE + PD VT+
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 178
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 179 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 213
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 118
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--Y 1507
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILL 177
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 178 GCK-YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY--G 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 180
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 181 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 215
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 120
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY-- 1507
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILL 179
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 180 GCK-YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY--G 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 124 HR---VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 179
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 180 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 214
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 119
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY-- 1507
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 120 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILL 178
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 179 GCK-YYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.4 bits (163), Expect = 7e-11, Method: Composition-based stats.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 752 IGAGSFGSVYKATLPY-GMNVAIKVFNLQ--LDGAIKSFDAECEVLRRVR---HRNLVKI 805
IG G++G+VYKA P+ G VA+K + +G S E +LRR+ H N+V++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 806 ISSCSNHGFK-----ALILEYMPQGSLEKWL-YSHKYTLNIQQRLDIMIDVASALEYLHH 859
+ C+ L+ E++ Q L +L + L + D+M L++LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH- 129
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
++H DLKP N+L+ L+DFG++++ + ++ + T Y APE +
Sbjct: 130 --ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV--TLWYRAPEVLLQ 185
Query: 920 GIVSTCGDVYSFGILMIETFTRK 942
+T D++S G + E F RK
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRK 208
Score = 56.6 bits (135), Expect = 1e-07, Method: Composition-based stats.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 19/216 (8%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ--EDRALKSFDAECEVMRRI 1388
+AT+ + +G G + +VYKA G A+K + E+ S E ++RR+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 1389 R---HRNLAKIVSSCSNPGFK-----ALILQYMPQGSLEKWL-YSHNYLLNIEQRLDIMI 1439
H N+ +++ C+ L+ +++ Q L +L + L E D+M
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMR 119
Query: 1440 DVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT 1499
L++LH + I+H DLKP N+L+ L DFG+A++ M + T
Sbjct: 120 QFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY--QMALDPVVVT 174
Query: 1500 IGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
+ Y APE + +T D++S G + E + RRKP
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAE-MFRRKP 209
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 16/224 (7%)
Query: 720 ILENDSLSLATWRRISYQELQRLTDGFSESNLIGAGSFGSVYKATL-----PYGMNVAIK 774
I E D+ ++ + R Q +R+ G IG G FG V++ P M VAIK
Sbjct: 371 IDEEDTYTMPSTRDYEIQR-ERIELG----RCIGEGQFGDVHQGIYMSPENP-AMAVAIK 424
Query: 775 VF-NLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYS 833
N D + F E +R+ H ++VK+I + + +I+E G L +L
Sbjct: 425 TCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQV 483
Query: 834 HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKL 893
K++L++ + +++AL YL +H D+ NVL+ L DFG+S+
Sbjct: 484 RKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRY 540
Query: 894 LDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
++ + +MAPE + ++ DV+ FG+ M E
Sbjct: 541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 584
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 11/194 (5%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIF-----SLQEDRALKSFDAECEVMRRIRHRNLAKIV 1397
+G G F V++ + N A+ + + D + F E MR+ H ++ K++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 1398 SSCS-NPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSI 1456
+ NP + +I++ G L +L + L++ + ++ AL YL S
Sbjct: 458 GVITENPVW--IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRF 512
Query: 1457 IHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTS 1516
+H D+ NVL+ LGDFG+++ ++ K + I +MAPE + +++
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 572
Query: 1517 GDVYSFGILMMETL 1530
DV+ FG+ M E L
Sbjct: 573 SDVWMFGVCMWEIL 586
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 10/190 (5%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSC 809
IG G++G VYKA YG A+K L+ + G + E +L+ ++H N+VK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
L+ E++ Q L+K L + L ++ + + + Y H V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRD 125
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YGSEGIVSTCGD 927
LKP N+L++ + ++DFG+++ G T + T Y AP+ GS+ ST D
Sbjct: 126 LKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVVTLWYRAPDVLMGSKK-YSTTID 183
Query: 928 VYSFGILMIE 937
++S G + E
Sbjct: 184 IWSVGCIFAE 193
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNLAKIVSSC 1400
+G G + VYKA G A+K L+ ED + S E +++ ++H N+ K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
L+ +++ Q L+K L L ++ + + Y H ++H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--YGSEGIVSTSGD 1518
LKP N+L++ + + DFG+A+ G+ K T + T+ Y AP+ GS+ ST+ D
Sbjct: 126 LKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVVTLWYRAPDVLMGSKK-YSTTID 183
Query: 1519 VYSFGILMMETL 1530
++S G + E +
Sbjct: 184 IWSVGCIFAEMV 195
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQ------LDGAIKSFDAECEVLRRVRHRNL 802
+G GSFG V Y T G VA+K+ N + + G I + E LR +RH ++
Sbjct: 21 LGEGSFGKVKLAYHTTT--GQKVALKIINKKVLAKSDMQGRI---EREISYLRLLRHPHI 75
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
+K+ + +++EY + + K ++ Q+ + SA+EY H
Sbjct: 76 IKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEARRFFQQIISAVEYCHR--- 130
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIV 922
++H DLKP N+LLD+ ++DFG+S ++ D + + Y APE S +
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVISGKLY 188
Query: 923 STCG-DVYSFGILMIETFTRKMPTDE 947
+ DV+S G+++ R++P D+
Sbjct: 189 AGPEVDVWSCGVILYVMLCRRLPFDD 214
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 12/201 (5%)
Query: 1343 LGTGIFSSVYKATFAD-GTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRNLAKIVS 1398
LG G F V A G A+KI + L + + E +R +RH ++ K+
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIH 1458
+ ++++Y L ++ + + E R + A+EY H+ I+H
Sbjct: 81 VIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHR---HKIVH 135
Query: 1459 CDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVS-TSG 1517
DLKP N+LLD+ + + DFG++ ++ + +K + + Y APE S + +
Sbjct: 136 RDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT--SCGSPNYAAPEVISGKLYAGPEV 193
Query: 1518 DVYSFGILMMETLTRRKPTDD 1538
DV+S G+++ L RR P DD
Sbjct: 194 DVWSCGVILYVMLCRRLPFDD 214
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 177
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 178 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 212
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 117
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--Y 1507
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILL 176
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 177 GCK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 13/206 (6%)
Query: 738 ELQRLTDGFSESNLIGAGSFGSVYKATL-----PYGMNVAIKVF-NLQLDGAIKSFDAEC 791
E+QR + IG G FG V++ P M VAIK N D + F E
Sbjct: 6 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENP-AMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 792 EVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVA 851
+R+ H ++VK+I + + +I+E G L +L K++L++ + ++
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 121
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
+AL YL +H D+ NVL+ L DFG+S+ ++ + +
Sbjct: 122 TALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIE 937
MAPE + ++ DV+ FG+ M E
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWE 204
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 11/194 (5%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIF-----SLQEDRALKSFDAECEVMRRIRHRNLAKIV 1397
+G G F V++ + N A+ + + D + F E MR+ H ++ K++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 1398 SSCS-NPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSI 1456
+ NP + +I++ G L +L + L++ + ++ AL YL S
Sbjct: 78 GVITENPVW--IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRF 132
Query: 1457 IHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTS 1516
+H D+ NVL+ LGDFG+++ ++ K + I +MAPE + +++
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 192
Query: 1517 GDVYSFGILMMETL 1530
DV+ FG+ M E L
Sbjct: 193 SDVWMFGVCMWEIL 206
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 67.4 bits (163), Expect = 7e-11, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 11/214 (5%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
D F +G G FG+VY A + A+KV L+ +G E E+ +RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
N++++ + + L+LE+ P+G L K L H + Q+ M ++A AL H+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADAL---HY 129
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
H VIH D+KP N+L+ ++DFG S S+ + T Y+ PE
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTLDYLPPEMIEG 186
Query: 920 GIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
D++ G+L E P D ET
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
Score = 60.1 bits (144), Expect = 1e-08, Method: Composition-based stats.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 13/212 (6%)
Query: 1331 RLATNGFSESNLLGTGIFSSVYKATFADGTN-AAIKIF---SLQEDRALKSFDAECEVMR 1386
+ + F LG G F +VY A A+K+ L+++ E E+
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 1387 RIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQR-LDIMIDVACAL 1445
+RH N+ ++ + + L+L++ P+G L K L H EQR M ++A AL
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF--DEQRSATFMEELADAL 127
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
Y H+ +IH D+KP N+L+ + DFG + S+++ T+ Y+ P
Sbjct: 128 HYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTLDYLPP 181
Query: 1506 EYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
E D++ G+L E L P D
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.4 bits (163), Expect = 7e-11, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 11/214 (5%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
D F +G G FG+VY A + A+KV L+ +G E E+ +RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
N++++ + + L+LE+ P+G L K L H + Q+ M ++A AL H+
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADAL---HY 130
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
H VIH D+KP N+L+ ++DFG S S+ + T Y+ PE
Sbjct: 131 CHERKVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTLDYLPPEMIEG 187
Query: 920 GIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
D++ G+L E P D ET
Sbjct: 188 KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 221
Score = 60.1 bits (144), Expect = 1e-08, Method: Composition-based stats.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 13/212 (6%)
Query: 1331 RLATNGFSESNLLGTGIFSSVYKATFADGTN-AAIKIF---SLQEDRALKSFDAECEVMR 1386
+ + F LG G F +VY A A+K+ L+++ E E+
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 1387 RIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQR-LDIMIDVACAL 1445
+RH N+ ++ + + L+L++ P+G L K L H EQR M ++A AL
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF--DEQRSATFMEELADAL 128
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
Y H+ +IH D+KP N+L+ + DFG + S+++ T+ Y+ P
Sbjct: 129 HYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTLDYLPP 182
Query: 1506 EYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
E D++ G+L E L P D
Sbjct: 183 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 13/208 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRH 799
+ F +G G FG+VY A + A+KV F QL+ G E E+ +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLH 858
N++++ + LILEY P G++ + L K + +QR I ++A+AL Y H
Sbjct: 68 PNILRLYGYFHDSTRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 125
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
VIH D+KP N+LL ++DFG S S + T Y+ PE
Sbjct: 126 ---SKKVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEMIE 179
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTD 946
+ D++S G+L E K P +
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 14/234 (5%)
Query: 1333 ATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECEVMRRI 1388
A F LG G F +VY A + A+K+ F Q ++A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVACALEY 1447
RH N+ ++ + LIL+Y P G++ + L + EQR I ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSY 123
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
H S +IH D+KP N+LL + DFG + S ++ T+ Y+ PE
Sbjct: 124 CH---SKKVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEM 177
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTD-DMFTGEVCLKHWVEESLPDAVTD 1560
+ D++S G+L E L + P + + + VE + PD VT+
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTE 231
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 10/190 (5%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISSC 809
IG G++G VYKA YG A+K L+ + G + E +L+ ++H N+VK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
L+ E++ Q L+K L + L ++ + + + Y H V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRD 125
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YGSEGIVSTCGD 927
LKP N+L++ + ++DFG+++ G T + T Y AP+ GS+ ST D
Sbjct: 126 LKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVVTLWYRAPDVLMGSKK-YSTTID 183
Query: 928 VYSFGILMIE 937
++S G + E
Sbjct: 184 IWSVGCIFAE 193
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNLAKIVSSC 1400
+G G + VYKA G A+K L+ ED + S E +++ ++H N+ K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
L+ +++ Q L+K L L ++ + + Y H ++H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--YGSEGIVSTSGD 1518
LKP N+L++ + + DFG+A+ G+ K T + T+ Y AP+ GS+ ST+ D
Sbjct: 126 LKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVVTLWYRAPDVLMGSKK-YSTTID 183
Query: 1519 VYSFGILMMETL 1530
++S G + E +
Sbjct: 184 IWSVGCIFAEMV 195
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 176
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 177 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 211
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 116
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--Y 1507
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILL 175
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 176 GCK-YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY--G 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 123 HR---VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 178
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 179 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 213
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 118
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY-- 1507
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILL 177
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 178 GCK-YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQ------LDGAIKSFDAECEVLRRVRHRNL 802
+G GSFG V Y T G VA+K+ N + + G I + E LR +RH ++
Sbjct: 22 LGEGSFGKVKLAYHTTT--GQKVALKIINKKVLAKSDMQGRI---EREISYLRLLRHPHI 76
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
+K+ + +++EY + + K ++ Q+ + SA+EY H
Sbjct: 77 IKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEARRFFQQIISAVEYCHR--- 131
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIV 922
++H DLKP N+LLD+ ++DFG+S ++ D + + Y APE S +
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVISGKLY 189
Query: 923 STCG-DVYSFGILMIETFTRKMPTDE 947
+ DV+S G+++ R++P D+
Sbjct: 190 AGPEVDVWSCGVILYVMLCRRLPFDD 215
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 12/201 (5%)
Query: 1343 LGTGIFSSVYKATFAD-GTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRNLAKIVS 1398
LG G F V A G A+KI + L + + E +R +RH ++ K+
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIH 1458
+ ++++Y L ++ + + E R + A+EY H+ I+H
Sbjct: 82 VIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHR---HKIVH 136
Query: 1459 CDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVS-TSG 1517
DLKP N+LLD+ + + DFG++ ++ + +K + + Y APE S + +
Sbjct: 137 RDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT--SCGSPNYAAPEVISGKLYAGPEV 194
Query: 1518 DVYSFGILMMETLTRRKPTDD 1538
DV+S G+++ L RR P DD
Sbjct: 195 DVWSCGVILYVMLCRRLPFDD 215
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.0 bits (162), Expect = 8e-11, Method: Composition-based stats.
Identities = 68/241 (28%), Positives = 96/241 (39%), Gaps = 18/241 (7%)
Query: 739 LQRLTDGFSESNL-----IGAGSFGSVYKAT--LPYGMNVAIKVFNLQLD-----GAIKS 786
LQ LT E +L +G GSFG V + P G V++ V L+ D A+
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 787 FDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDI 846
F E + + HRNL+++ K ++ E P GSL L H+ +
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY 126
Query: 847 MIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS--VTQTM 904
+ VA + YL IH DL N+LL + + DFG+ + L D V Q
Sbjct: 127 AVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 183
Query: 905 TLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLR 964
F + APE S D + FG+ + E FT G L K +E R
Sbjct: 184 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER 243
Query: 965 L 965
L
Sbjct: 244 L 244
Score = 60.5 bits (145), Expect = 8e-09, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 1343 LGTGIFSSVYKATF--ADGTNAAIKIFSLQED-----RALKSFDAECEVMRRIRHRNLAK 1395
LG G F V + + G ++ + L+ D A+ F E M + HRNL +
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSH--NYLLNIEQRLDIMIDVACALEYLHQGYS 1453
+ P K ++ + P GSL L H ++LL R + VA + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---S 139
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS--MKQTMTLATIGYMAPEYGSEG 1511
IH DL N+LL + +GDFG+ + L D + Q + APE
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 1512 IVSTSGDVYSFGILMMETLT 1531
S + D + FG+ + E T
Sbjct: 200 TFSHASDTWMFGVTLWEMFT 219
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.0 bits (162), Expect = 8e-11, Method: Composition-based stats.
Identities = 68/241 (28%), Positives = 96/241 (39%), Gaps = 18/241 (7%)
Query: 739 LQRLTDGFSESNL-----IGAGSFGSVYKAT--LPYGMNVAIKVFNLQLD-----GAIKS 786
LQ LT E +L +G GSFG V + P G V++ V L+ D A+
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 787 FDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDI 846
F E + + HRNL+++ K ++ E P GSL L H+ +
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY 126
Query: 847 MIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS--VTQTM 904
+ VA + YL IH DL N+LL + + DFG+ + L D V Q
Sbjct: 127 AVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEH 183
Query: 905 TLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLR 964
F + APE S D + FG+ + E FT G L K +E R
Sbjct: 184 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER 243
Query: 965 L 965
L
Sbjct: 244 L 244
Score = 60.5 bits (145), Expect = 8e-09, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 1343 LGTGIFSSVYKATF--ADGTNAAIKIFSLQED-----RALKSFDAECEVMRRIRHRNLAK 1395
LG G F V + + G ++ + L+ D A+ F E M + HRNL +
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSH--NYLLNIEQRLDIMIDVACALEYLHQGYS 1453
+ P K ++ + P GSL L H ++LL R + VA + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---S 139
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS--MKQTMTLATIGYMAPEYGSEG 1511
IH DL N+LL + +GDFG+ + L D + Q + APE
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 1512 IVSTSGDVYSFGILMMETLT 1531
S + D + FG+ + E T
Sbjct: 200 TFSHASDTWMFGVTLWEMFT 219
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY--G 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 177
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 178 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 212
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 117
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY-- 1507
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILL 176
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 177 GCK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY--G 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 176
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 177 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 211
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 116
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY-- 1507
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILL 175
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 176 GCK-YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 178
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 179 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 213
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 118
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--Y 1507
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILL 177
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 178 GCK-YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 14/219 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG 860
N+VK++ L+ E++ Q L+K++ + T I L I + L+ L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALT-GIPLPL-IKSYLFQLLQGLAFC 119
Query: 861 HPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY--GS 918
H V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 179 K-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 212
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + L I L + L L QG
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPL-----IKSYLFQLLQGLA 117
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY-- 1507
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILL 176
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 177 GCK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY--G 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 177
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 178 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 212
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 117
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY-- 1507
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILL 176
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 177 GCK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+ L + +G + E +L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T T + T Y APE G
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 178 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 212
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 1337 FSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDA----ECEVMRRIRHRN 1392
F + +G G + VYKA T + + ++ D + + E +++ + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG- 1451
+ K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGL 116
Query: 1452 ---YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE-- 1506
+S ++H DLKP N+L++ + L DFG+A+ GV T + T+ Y APE
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEIL 175
Query: 1507 YGSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 176 LGCK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+ L + +G + E +L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T T + T Y APE G
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 177 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 211
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 1337 FSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDA----ECEVMRRIRHRN 1392
F + +G G + VYKA T + + ++ D + + E +++ + H N
Sbjct: 4 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG- 1451
+ K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGL 115
Query: 1452 ---YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE-- 1506
+S ++H DLKP N+L++ + L DFG+A+ GV T + T+ Y APE
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEIL 174
Query: 1507 YGSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 175 LGCK-YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 13/215 (6%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRH 799
+ F +G G FG+VY A + A+KV F QL+ G E E+ +RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLH 858
N++++ + LILEY P G++ + L K + +QR I ++A+AL Y H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 128
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGS 918
VIH D+KP N+LL ++DFG S S + T Y+ PE
Sbjct: 129 SKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTLDYLPPEMIE 182
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+ D++S G+L E K P + ET
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 14/234 (5%)
Query: 1333 ATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECEVMRRI 1388
A F LG G F +VY A A+K+ F Q ++A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVACALEY 1447
RH N+ ++ + LIL+Y P G++ + L + EQR I ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSY 126
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
H S +IH D+KP N+LL + DFG + S ++ T+ Y+ PE
Sbjct: 127 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTLDYLPPEM 180
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ D++S G+L E L + P + E + VE + PD VT+
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQ------LDGAIKSFDAECEVLRRVRHRNL 802
+G GSFG V Y T G VA+K+ N + + G I + E LR +RH ++
Sbjct: 16 LGEGSFGKVKLAYHTTT--GQKVALKIINKKVLAKSDMQGRI---EREISYLRLLRHPHI 70
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
+K+ + +++EY + + K ++ Q+ + SA+EY H
Sbjct: 71 IKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEARRFFQQIISAVEYCHR--- 125
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIV 922
++H DLKP N+LLD+ ++DFG+S ++ D + + Y APE S +
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVISGKLY 183
Query: 923 STCG-DVYSFGILMIETFTRKMPTDE 947
+ DV+S G+++ R++P D+
Sbjct: 184 AGPEVDVWSCGVILYVMLCRRLPFDD 209
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 12/201 (5%)
Query: 1343 LGTGIFSSVYKATFAD-GTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRNLAKIVS 1398
LG G F V A G A+KI + L + + E +R +RH ++ K+
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIH 1458
+ ++++Y L ++ + + E R + A+EY H+ I+H
Sbjct: 76 VIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHR---HKIVH 130
Query: 1459 CDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVS-TSG 1517
DLKP N+LLD+ + + DFG++ ++ + +K + + Y APE S + +
Sbjct: 131 RDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT--SCGSPNYAAPEVISGKLYAGPEV 188
Query: 1518 DVYSFGILMMETLTRRKPTDD 1538
DV+S G+++ L RR P DD
Sbjct: 189 DVWSCGVILYVMLCRRLPFDD 209
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 66.6 bits (161), Expect = 9e-11, Method: Composition-based stats.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 18/208 (8%)
Query: 746 FSESNL-----IGAGSFGSVYKAT-LPYGMNVAIKVF--NLQLDGAIKSFDAECE---VL 794
F E+ L +G+G FG+V+K +P G ++ I V ++ +SF A + +
Sbjct: 28 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 87
Query: 795 RRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASAL 854
+ H ++V+++ C + L+ +Y+P GSL + H+ L Q L+ + +A +
Sbjct: 88 GSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGM 146
Query: 855 EYLH-HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED-SVTQTMTLATFGYM 912
YL HG ++H +L NVLL + ++DFG++ LL +D + + +M
Sbjct: 147 YYLEEHG----MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 202
Query: 913 APEYGSEGIVSTCGDVYSFGILMIETFT 940
A E G + DV+S+G+ + E T
Sbjct: 203 ALESIHFGKYTHQSDVWSYGVTVWELMT 230
Score = 65.1 bits (157), Expect = 3e-10, Method: Composition-based stats.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 1337 FSESNL-----LGTGIFSSVYKATF-ADGTNAAIKI-FSLQEDRA-LKSFDAECEVMRRI 1388
F E+ L LG+G+F +V+K + +G + I + + ED++ +SF A + M I
Sbjct: 28 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 87
Query: 1389 ---RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
H ++ +++ C + L+ QY+P GSL + H L + L+ + +A +
Sbjct: 88 GSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGM 146
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD-SMKQTMTLATIGYMA 1504
YL + ++H +L NVLL + DFG+A LL D + + I +MA
Sbjct: 147 YYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 203
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT 1531
E G + DV+S+G+ + E +T
Sbjct: 204 LESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 66.6 bits (161), Expect = 9e-11, Method: Composition-based stats.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 18/208 (8%)
Query: 746 FSESNL-----IGAGSFGSVYKAT-LPYGMNVAIKVF--NLQLDGAIKSFDAECE---VL 794
F E+ L +G+G FG+V+K +P G ++ I V ++ +SF A + +
Sbjct: 10 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 69
Query: 795 RRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASAL 854
+ H ++V+++ C + L+ +Y+P GSL + H+ L Q L+ + +A +
Sbjct: 70 GSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGM 128
Query: 855 EYLH-HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED-SVTQTMTLATFGYM 912
YL HG ++H +L NVLL + ++DFG++ LL +D + + +M
Sbjct: 129 YYLEEHG----MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 184
Query: 913 APEYGSEGIVSTCGDVYSFGILMIETFT 940
A E G + DV+S+G+ + E T
Sbjct: 185 ALESIHFGKYTHQSDVWSYGVTVWELMT 212
Score = 65.1 bits (157), Expect = 3e-10, Method: Composition-based stats.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 1337 FSESNL-----LGTGIFSSVYKATF-ADGTNAAIKI-FSLQEDRA-LKSFDAECEVMRRI 1388
F E+ L LG+G+F +V+K + +G + I + + ED++ +SF A + M I
Sbjct: 10 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 69
Query: 1389 ---RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACAL 1445
H ++ +++ C + L+ QY+P GSL + H L + L+ + +A +
Sbjct: 70 GSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGM 128
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVD-SMKQTMTLATIGYMA 1504
YL + ++H +L NVLL + DFG+A LL D + + I +MA
Sbjct: 129 YYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLT 1531
E G + DV+S+G+ + E +T
Sbjct: 186 LESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.6 bits (161), Expect = 9e-11, Method: Composition-based stats.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 752 IGAGSFGSVYKATLPY-GMNVAIKVFNLQ--LDGAIKSFDAECEVLRRVR---HRNLVKI 805
IG G++G+VYKA P+ G VA+K + +G S E +LRR+ H N+V++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 806 ISSCSNHGFK-----ALILEYMPQGSLEKWL-YSHKYTLNIQQRLDIMIDVASALEYLHH 859
+ C+ L+ E++ Q L +L + L + D+M L++LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH- 129
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
++H DLKP N+L+ L+DFG++++ + ++ + T Y APE +
Sbjct: 130 --ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV--TLWYRAPEVLLQ 185
Query: 920 GIVSTCGDVYSFGILMIETFTRK 942
+T D++S G + E F RK
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRK 208
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 19/216 (8%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ--EDRALKSFDAECEVMRRI 1388
+AT+ + +G G + +VYKA G A+K + E+ S E ++RR+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 1389 R---HRNLAKIVSSCSNPGFK-----ALILQYMPQGSLEKWL-YSHNYLLNIEQRLDIMI 1439
H N+ +++ C+ L+ +++ Q L +L + L E D+M
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMR 119
Query: 1440 DVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT 1499
L++LH + I+H DLKP N+L+ L DFG+A++ M + T
Sbjct: 120 QFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY--QMALFPVVVT 174
Query: 1500 IGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
+ Y APE + +T D++S G + E + RRKP
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAE-MFRRKP 209
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 13/130 (10%)
Query: 1432 EQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDS 1490
++ ++++ D AL + HQ IIH D+KP+N+L+ + DFGIA+ + D +S
Sbjct: 116 KRAIEVIADACQALNFSHQ---NGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNS 172
Query: 1491 MKQT-MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGE----VC 1545
+ QT + T Y++PE V DVYS G ++ E LT P FTG+ V
Sbjct: 173 VXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVA 228
Query: 1546 LKHWVEESLP 1555
+H E+ +P
Sbjct: 229 YQHVREDPIP 238
Score = 63.9 bits (154), Expect = 7e-10, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 18/222 (8%)
Query: 742 LTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF--NLQLDGAIK-SFDAECEVLRRV 797
L+D + ++G G V+ A L +VA+KV +L D + F E + +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 798 RHRNLVKIISSCSNHG----FKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
H +V + + +++EY+ +L +++ + ++ ++++ D A
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQA 128
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQT-MTLATFGY 911
L + H +IH D+KP+N+L+ + DFGI++ + D +SV QT + T Y
Sbjct: 129 LNF---SHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQY 185
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
++PE V DVYS G ++ E T + P FTG++
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDS 223
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQ------LDGAIKSFDAECEVLRRVRHRNL 802
+G GSFG V Y T G VA+K+ N + + G I + E LR +RH ++
Sbjct: 12 LGEGSFGKVKLAYHTTT--GQKVALKIINKKVLAKSDMQGRI---EREISYLRLLRHPHI 66
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
+K+ + +++EY + + K ++ Q+ + SA+EY H
Sbjct: 67 IKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEARRFFQQIISAVEYCHR--- 121
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIV 922
++H DLKP N+LLD+ ++DFG+S ++ D + + Y APE S +
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVISGKLY 179
Query: 923 STCG-DVYSFGILMIETFTRKMPTDE 947
+ DV+S G+++ R++P D+
Sbjct: 180 AGPEVDVWSCGVILYVMLCRRLPFDD 205
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 12/201 (5%)
Query: 1343 LGTGIFSSVYKATFAD-GTNAAIKIFS---LQEDRALKSFDAECEVMRRIRHRNLAKIVS 1398
LG G F V A G A+KI + L + + E +R +RH ++ K+
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIH 1458
+ ++++Y L ++ + + E R + A+EY H+ I+H
Sbjct: 72 VIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHR---HKIVH 126
Query: 1459 CDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVS-TSG 1517
DLKP N+LLD+ + + DFG++ ++ + +K + + Y APE S + +
Sbjct: 127 RDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT--SCGSPNYAAPEVISGKLYAGPEV 184
Query: 1518 DVYSFGILMMETLTRRKPTDD 1538
DV+S G+++ L RR P DD
Sbjct: 185 DVWSCGVILYVMLCRRLPFDD 205
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 742 LTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF--NLQLDGAIK-SFDAECEVLRRV 797
L+D + ++G G V+ A L +VA+KV +L D + F E + +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 798 RHRNLVKIISSCSNHG----FKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
H +V + ++ +++EY+ +L +++ + ++ ++++ D A
Sbjct: 70 NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQA 128
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQT-MTLATFGY 911
L + H +IH D+KP+N+++ + DFGI++ + D +SVTQT + T Y
Sbjct: 129 LNF---SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
++PE V DVYS G ++ E T + P FTG++
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDS 223
Score = 66.2 bits (160), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 13/130 (10%)
Query: 1432 EQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDS 1490
++ ++++ D AL + HQ IIH D+KP+N+++ + DFGIA+ + D +S
Sbjct: 116 KRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 1491 MKQT-MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGE----VC 1545
+ QT + T Y++PE V DVYS G ++ E LT P FTG+ V
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVA 228
Query: 1546 LKHWVEESLP 1555
+H E+ +P
Sbjct: 229 YQHVREDPIP 238
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 11/214 (5%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPYGMNV-AIKVF---NLQLDGAIKSFDAECEVLRRVRH 799
D F +G G FG+VY A + A+KV L+ +G E E+ +RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
N++++ + + L+LE+ P+G L K L H + Q+ M ++A AL H+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADAL---HY 129
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
H VIH D+KP N+L+ ++DFG S S+ + T Y+ PE
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTLDYLPPEMIEG 186
Query: 920 GIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
D++ G+L E P D ET
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 1343 LGTGIFSSVYKATFADGTN-AAIKIF---SLQEDRALKSFDAECEVMRRIRHRNLAKIVS 1398
LG G F +VY A A+K+ L+++ E E+ +RH N+ ++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQR-LDIMIDVACALEYLHQGYSTSII 1457
+ L+L++ P+G L K L H EQR M ++A AL Y H+ +I
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRF--DEQRSATFMEELADALHYCHE---RKVI 136
Query: 1458 HCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSG 1517
H D+KP N+L+ + DFG + S+++ T+ Y+ PE
Sbjct: 137 HRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKV 193
Query: 1518 DVYSFGILMMETLTRRKPTD 1537
D++ G+L E L P D
Sbjct: 194 DLWCAGVLCYEFLVGMPPFD 213
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 103/240 (42%), Gaps = 25/240 (10%)
Query: 1331 RLATNGFSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVM-RRI 1388
RL + F +LG G F V A + G A+K+ L++D L+ D EC + +RI
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKV--LKKDVILQDDDVECTMTEKRI 76
Query: 1389 -----RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVAC 1443
H L ++ P +++++ G L + R ++
Sbjct: 77 LSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIIS 135
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTL-ATIGY 1502
AL +LH II+ DLK NVLLD + L DFG+ K +G+ + T T T Y
Sbjct: 136 ALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDY 190
Query: 1503 MAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP-----TDDMFTG----EVCLKHWVEES 1553
+APE E + + D ++ G+L+ E L P DD+F EV W+ E
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHED 250
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 45/246 (18%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNL 802
D F ++G GSFG V A + G A+KV L+ D ++ D EC + +
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKV--LKKDVILQDDDVECTMTEK------ 74
Query: 803 VKIISSCSNHGFKA-------------LILEYMPQGSLEKWLYSHKYTLNIQQRLDIMID 849
+I+S NH F ++E++ G L + + + R +
Sbjct: 75 -RILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAE 132
Query: 850 VASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF 909
+ SAL +LH +I+ DLK NVLLD + L+DFG+ K + + +T ATF
Sbjct: 133 IISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCK-----EGICNGVTTATF 184
Query: 910 ----GYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMP-----TDEMFTG----ETSLK 956
Y+APE E + D ++ G+L+ E P D++F E
Sbjct: 185 CGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP 244
Query: 957 KWVEES 962
W+ E
Sbjct: 245 TWLHED 250
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 64/207 (30%), Positives = 94/207 (45%), Gaps = 13/207 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRHRNLVKIIS 807
+G G FG+VY A + A+KV F QL+ G E E+ +RH N++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 808 SCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLHHGHPTPVI 866
+ LILEY P G++ + L K + +QR I ++A+AL Y H VI
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSKR---VI 135
Query: 867 HCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCG 926
H D+KP N+LL ++DFG S S +T T Y+ PE
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEXIEGRXHDEKV 192
Query: 927 DVYSFGILMIETFTRKMPTDEMFTGET 953
D++S G+L E K P + ET
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQET 219
Score = 63.5 bits (153), Expect = 8e-10, Method: Composition-based stats.
Identities = 67/234 (28%), Positives = 102/234 (43%), Gaps = 14/234 (5%)
Query: 1333 ATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECEVMRRI 1388
A F LG G F +VY A A+K+ F Q ++A E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVACALEY 1447
RH N+ ++ + LIL+Y P G++ + L + EQR I ++A AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSY 128
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
H S +IH D+KP N+LL + DFG + S ++T T+ Y+ PE
Sbjct: 129 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEX 182
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
D++S G+L E L + P + E + VE + PD VT+
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 19/223 (8%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKAT-FADGTNAAIKIFSLQEDRALKSFDAECEVMR 1386
++ N LG G F V +AT F G A+ +++ ++ D + +M
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 1387 RIR-------HRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI 1439
++ H N+ ++ +C++ G +I +Y G L +L + +L + I
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 1440 DVACALEYLH------QGY----STSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGV 1488
+ LH QG S + IH D+ NVLL + VA +GDFG+A+ +++
Sbjct: 159 STLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 1489 DSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ + + + +MAPE + + + DV+S+GIL+ E +
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 21/209 (10%)
Query: 752 IGAGSFGSVYKATLPYGM-------NVAIKVFNLQLDGAIK-SFDAECEVLRRV-RHRNL 802
+GAG+FG V +AT +G+ VA+K+ K + +E +++ + +H N+
Sbjct: 54 LGAGAFGKVVEAT-AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
V ++ +C++ G +I EY G L +L L I S + LH
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQ 172
Query: 863 TP----------VIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTMTLATFGY 911
IH D+ NVLL + VA + DFG+++ +++ + + + +
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW 232
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFT 940
MAPE + + + DV+S+GIL+ E F+
Sbjct: 233 MAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+K++ + T + + + + L + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 180
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 181 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 215
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q L+K++ + + L I L + L L QG
Sbjct: 68 VKLLDVIHTENKLYLVFEHVDQ-DLKKFMDA-SALTGIPLPL-----IKSYLFQLLQGLA 120
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--Y 1507
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILL 179
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 180 GCK-YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 66.2 bits (160), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 13/130 (10%)
Query: 1432 EQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDS 1490
++ ++++ D AL + HQ IIH D+KP+N+++ + DFGIA+ + D +S
Sbjct: 116 KRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 1491 MKQT-MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGE----VC 1545
+ QT + T Y++PE V DVYS G ++ E LT P FTG+ V
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVA 228
Query: 1546 LKHWVEESLP 1555
+H E+ +P
Sbjct: 229 YQHVREDPIP 238
Score = 65.5 bits (158), Expect = 3e-10, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 18/222 (8%)
Query: 742 LTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF--NLQLDGAIK-SFDAECEVLRRV 797
L+D + ++G G V+ A L +VA+KV +L D + F E + +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 798 RHRNLVKIISSCSNHG----FKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
H +V + + +++EY+ +L +++ + ++ ++++ D A
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQA 128
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQT-MTLATFGY 911
L + H +IH D+KP+N+++ + DFGI++ + D +SVTQT + T Y
Sbjct: 129 LNF---SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
++PE V DVYS G ++ E T + P FTG++
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDS 223
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP
DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 66.2 bits (160), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 13/130 (10%)
Query: 1432 EQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDS 1490
++ ++++ D AL + HQ IIH D+KP+N+++ + DFGIA+ + D +S
Sbjct: 116 KRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 1491 MKQT-MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGE----VC 1545
+ QT + T Y++PE V DVYS G ++ E LT P FTG+ V
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPDSVA 228
Query: 1546 LKHWVEESLP 1555
+H E+ +P
Sbjct: 229 YQHVREDPIP 238
Score = 65.5 bits (158), Expect = 3e-10, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 18/222 (8%)
Query: 742 LTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF--NLQLDGAIK-SFDAECEVLRRV 797
L+D + ++G G V+ A L +VA+KV +L D + F E + +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 798 RHRNLVKIISSCSNHG----FKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
H +V + + +++EY+ +L +++ + ++ ++++ D A
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQA 128
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQT-MTLATFGY 911
L + H +IH D+KP+N+++ + DFGI++ + D +SVTQT + T Y
Sbjct: 129 LNF---SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
++PE V DVYS G ++ E T + P FTG++
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDS 223
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 66.2 bits (160), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 13/130 (10%)
Query: 1432 EQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDS 1490
++ ++++ D AL + HQ IIH D+KP+N+++ + DFGIA+ + D +S
Sbjct: 133 KRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 189
Query: 1491 MKQT-MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGE----VC 1545
+ QT + T Y++PE V DVYS G ++ E LT P FTG+ V
Sbjct: 190 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVA 245
Query: 1546 LKHWVEESLP 1555
+H E+ +P
Sbjct: 246 YQHVREDPIP 255
Score = 66.2 bits (160), Expect = 2e-10, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 18/222 (8%)
Query: 742 LTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF--NLQLDGAIK-SFDAECEVLRRV 797
L+D + ++G G V+ A L +VA+KV +L D + F E + +
Sbjct: 27 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 86
Query: 798 RHRNLVKIISSCSNHG----FKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
H +V + + +++EY+ +L +++ + ++ ++++ D A
Sbjct: 87 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQA 145
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQT-MTLATFGY 911
L + H +IH D+KP+N+++ + DFGI++ + D +SVTQT + T Y
Sbjct: 146 LNF---SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 202
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
++PE V DVYS G ++ E T + P FTG++
Sbjct: 203 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDS 240
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium
Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium
Tuberculosis Pknb
Length = 311
Score = 66.2 bits (160), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 13/130 (10%)
Query: 1432 EQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDS 1490
++ ++++ D AL + HQ IIH D+KP+N+++ + DFGIA+ + D +S
Sbjct: 116 KRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 1491 MKQT-MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGE----VC 1545
+ QT + T Y++PE V DVYS G ++ E LT P FTG+ V
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVA 228
Query: 1546 LKHWVEESLP 1555
+H E+ +P
Sbjct: 229 YQHVREDPIP 238
Score = 66.2 bits (160), Expect = 2e-10, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 18/222 (8%)
Query: 742 LTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF--NLQLDGAIK-SFDAECEVLRRV 797
L+D + ++G G V+ A L +VA+KV +L D + F E + +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 798 RHRNLVKIISSCSNHG----FKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA 853
H +V + + +++EY+ +L +++ + ++ ++++ D A
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQA 128
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQT-MTLATFGY 911
L + H +IH D+KP+N+++ + DFGI++ + D +SVTQT + T Y
Sbjct: 129 LNF---SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
++PE V DVYS G ++ E T + P FTG++
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDS 223
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 36/224 (16%)
Query: 1337 FSESNLLGTGIFSSVYKAT-FADGTNAAIKIFSL-QEDRALKSFDAECEVMRRIRH---- 1390
F LG G F V++A D N AIK L + A + E + + ++ H
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 1391 --------RNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQR-----LDI 1437
+N + + S + + +Q + +L+ W+ N IE+R L I
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM---NGRCTIEERERSVCLHI 123
Query: 1438 MIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT- 1496
+ +A A+E+LH S ++H DLKPSN+ D V +GDFG+ +D + + +T
Sbjct: 124 FLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 1497 ----------LATIGYMAPEYGSEGIVSTSGDVYSFGILMMETL 1530
+ T YM+PE S D++S G+++ E L
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 33/224 (14%)
Query: 742 LTDGFSESNLIGAGSFGSVYKATLPYG-MNVAIKVFNL-QLDGAIKSFDAECEVLRRVRH 799
LTD F +G G FG V++A N AIK L + A + E + L ++ H
Sbjct: 4 LTD-FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH 62
Query: 800 RNLVKIISS------------CSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQR---L 844
+V+ ++ S + + ++ + +L+ W+ + + T+ ++R L
Sbjct: 63 PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM-NGRCTIEERERSVCL 121
Query: 845 DIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM 904
I + +A A+E+LH ++H DLKPSN+ D V + DFG+ +D ++ +
Sbjct: 122 HIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 905 T-----------LATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
T + T YM+PE S D++S G+++ E
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 86/187 (45%), Gaps = 10/187 (5%)
Query: 1343 LGTGIFSSVYKAT-FADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
LGTG F V++ T A G N A K + ++ E + M +RH L + +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 1402 NPGFKALILQYMPQGSL-EKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
+ +I ++M G L EK HN ++ ++ ++ M V L ++H+ + +H D
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHE---NNYVHLD 280
Query: 1461 LKPSNVLLDDDMVAHLG--DFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGD 1518
LKP N++ L DFG+ LD S+K +T T + APE V D
Sbjct: 281 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK--VTTGTAEFAAPEVAEGKPVGYYTD 338
Query: 1519 VYSFGIL 1525
++S G+L
Sbjct: 339 MWSVGVL 345
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 12/218 (5%)
Query: 724 DSLSLATWRRISYQELQ----RLTDGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNL 778
D+ W++ Q ++ + D + +G G+FG V++ T G N A K
Sbjct: 133 DNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMT 192
Query: 779 QLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL 838
+ ++ E + + +RH LV + + + +I E+M G L + + +
Sbjct: 193 PHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKM 252
Query: 839 NIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLS--DFGISKLLDG 896
+ + ++ M V L ++H + +H DLKP N++ L DFG++ LD
Sbjct: 253 SEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309
Query: 897 EDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGIL 934
+ SV T A F APE V D++S G+L
Sbjct: 310 KQSVKVTTGTAEFA--APEVAEGKPVGYYTDMWSVGVL 345
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVF-NLQLDGAIKSFDAECEVLRRVRHRNLVK 804
+G G+FG VY+ + P + VA+K + + F E ++ ++ H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLY------SHKYTLNIQQRLDIMIDVASALEYLH 858
I + ++LE M G L+ +L S +L + L + D+A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 859 HGHPTPVIHCDLKPSNVLLD---DDTVAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
H IH D+ N LL VA + DFG+++ + + +M P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFT 940
E EGI ++ D +SFG+L+ E F+
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 1343 LGTGIFSSVYKATFA----DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAK 1395
LG G F VY+ + D + + + +L E ++ F E ++ ++ H+N+ +
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 1396 I--VSSCSNPGFKALILQYMPQGSLEKWLY------SHNYLLNIEQRLDIMIDVACALEY 1447
VS S P F ++L+ M G L+ +L S L + L + D+AC +Y
Sbjct: 99 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 1448 LHQGYSTSIIHCDLKPSNVLLD---DDMVAHLGDFGIAK-LLDGVDSMKQTMTLATIGYM 1503
L + + IH D+ N LL VA +GDFG+A+ + K + + +M
Sbjct: 157 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE EGI ++ D +SFG+L+ E +
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 65.9 bits (159), Expect = 2e-10, Method: Composition-based stats.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 752 IGAGSFGSVYKATLPY-GMNVAIKVFNLQLDGAIK-----SFDAECEVLRRVR---HRNL 802
IG G++G+VYKA P+ G VA+K + G S E +LRR+ H N+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 803 VKIISSCSNHGFK-----ALILEYMPQGSLEKWL-YSHKYTLNIQQRLDIMIDVASALEY 856
V+++ C+ L+ E++ Q L +L + L + D+M L++
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 135
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
LH ++H DLKP N+L+ L+DFG++++ + ++T + T Y APE
Sbjct: 136 LH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV--TLWYRAPEV 190
Query: 917 GSEGIVSTCGDVYSFGILMIETFTRK 942
+ +T D++S G + E F RK
Sbjct: 191 LLQSTYATPVDMWSVGCIFAEMFRRK 216
Score = 57.0 bits (136), Expect = 8e-08, Method: Composition-based stats.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 22/219 (10%)
Query: 1332 LATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALK-----SFDAECEVM 1385
+AT+ + +G G + +VYKA G A+K + S E ++
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 1386 RRIR---HRNLAKIVSSCSNPGFK-----ALILQYMPQGSLEKWL-YSHNYLLNIEQRLD 1436
RR+ H N+ +++ C+ L+ +++ Q L +L + L E D
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKD 124
Query: 1437 IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT 1496
+M L++LH + I+H DLKP N+L+ L DFG+A++ M T
Sbjct: 125 LMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY--QMALTPV 179
Query: 1497 LATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
+ T+ Y APE + +T D++S G + E + RRKP
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAE-MFRRKP 217
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVF-NLQLDGAIKSFDAECEVLRRVRHRNLVK 804
+G G+FG VY+ + P + VA+K + + F E ++ ++ H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLY------SHKYTLNIQQRLDIMIDVASALEYLH 858
I + ++LE M G L+ +L S +L + L + D+A +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 859 HGHPTPVIHCDLKPSNVLLD---DDTVAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
H IH D+ N LL VA + DFG+++ + + +M P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFT 940
E EGI ++ D +SFG+L+ E F+
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 1343 LGTGIFSSVYKATFA----DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAK 1395
LG G F VY+ + D + + + +L E ++ F E ++ ++ H+N+ +
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 1396 I--VSSCSNPGFKALILQYMPQGSLEKWLY------SHNYLLNIEQRLDIMIDVACALEY 1447
VS S P F ++L+ M G L+ +L S L + L + D+AC +Y
Sbjct: 113 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 1448 LHQGYSTSIIHCDLKPSNVLLD---DDMVAHLGDFGIAK-LLDGVDSMKQTMTLATIGYM 1503
L + + IH D+ N LL VA +GDFG+A+ + K + + +M
Sbjct: 171 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE EGI ++ D +SFG+L+ E +
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIKVFN-LQLDGA-IKSFDAECEVLRRVRHRNLVKIISS 808
IG G+F V A + G VA+K+ + QL+ + ++ E +++ + H N+VK+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 809 CSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHC 868
L++EY G + +L +H + + R + SA++Y H ++H
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 130
Query: 869 DLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF----GYMAPE-YGSEGIVS 923
DLK N+LLD D ++DFG S + T L TF Y APE + +
Sbjct: 131 DLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 184
Query: 924 TCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLR 964
DV+S G+++ + +P F G+ +LK+ E LR
Sbjct: 185 PEVDVWSLGVILYTLVSGSLP----FDGQ-NLKELRERVLR 220
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 10/199 (5%)
Query: 1343 LGTGIFSSVYKAT-FADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G G F+ V A G A+KI + +L+ E +M+ + H N+ K+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
L+++Y G + +L +H ++ E R + A++Y HQ + I+H
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 130
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE-YGSEGIVSTSGD 1518
DLK N+LLD DM + DFG + + K + Y APE + + D
Sbjct: 131 DLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 188
Query: 1519 VYSFGILMMETLTRRKPTD 1537
V+S G+++ ++ P D
Sbjct: 189 VWSLGVILYTLVSGSLPFD 207
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+ ++ + T + + + + L + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T T + T Y APE G
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 177 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 211
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q K + L I L + L L QG
Sbjct: 64 VKLLDVIHTENKLYLVFEHVHQDL--KTFMDASALTGIPLPL-----IKSYLFQLLQGLA 116
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--Y 1507
+S ++H DLKP N+L++ + L DFG+A+ GV T + T+ Y APE
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILL 175
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 176 GCK-YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNL---QLDGAIKSFDAECEVLRRVRHRN 801
FS+ IG GSFG+VY A + VAIK + Q + + E L+++RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 802 LVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGH 861
++ L++EY GS L HK L Q ++I AL+ L + H
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPL---QEVEIAAVTHGALQGLAYLH 171
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY---GS 918
+IH D+K N+LL + + L DFG + ++ + T +MAPE
Sbjct: 172 SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM-----APANXFVGTPYWMAPEVILAMD 226
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMP 944
EG DV+S GI IE RK P
Sbjct: 227 EGQYDGKVDVWSLGITCIELAERKPP 252
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 16/210 (7%)
Query: 1337 FSESNLLGTGIFSSVYKATFADGTNA-AIKIFSL---QEDRALKSFDAECEVMRRIRHRN 1392
FS+ +G G F +VY A + AIK S Q + + E ++++RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
+ L+++Y GS L H L Q ++I AL+ L +
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPL---QEVEIAAVTHGALQGLAYLH 171
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY---GS 1509
S ++IH D+K N+LL + + LGDFG A ++ + + T +MAPE
Sbjct: 172 SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF-----VGTPYWMAPEVILAMD 226
Query: 1510 EGIVSTSGDVYSFGILMMETLTRRKPTDDM 1539
EG DV+S GI +E R+ P +M
Sbjct: 227 EGQYDGKVDVWSLGITCIELAERKPPLFNM 256
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 7/194 (3%)
Query: 752 IGAGSFGSVYKATLPY-GMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
IG GS G V A + G VA+K+ +L+ + E ++R +H N+V++ S
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 811 NHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+++E++ G+L + + LN +Q + V AL YLH VIH D+
Sbjct: 113 VGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDI 167
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
K ++LL D LSDFG + +D + + T +MAPE S + +T D++S
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQIS-KDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWS 226
Query: 931 FGILMIETFTRKMP 944
GI++IE + P
Sbjct: 227 LGIMVIEMVDGEPP 240
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 9/217 (4%)
Query: 1320 AALRRISYQ-ELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSF 1378
AALR + Q + RL + + + TGI + G A+K+ L++ + +
Sbjct: 32 AALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREK--HSGRQVAVKMMDLRKQQRRELL 89
Query: 1379 DAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIM 1438
E +MR +H N+ ++ S ++++++ G+L + LN EQ +
Sbjct: 90 FNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVC 147
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA 1498
V AL YLH + +IH D+K ++LL D L DFG + D K+ +
Sbjct: 148 EAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK-DVPKRKXLVG 203
Query: 1499 TIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
T +MAPE S + +T D++S GI+++E + P
Sbjct: 204 TPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVF-NLQLDGAIKSFDAECEVLRRVRHRNLVK 804
+G G+FG VY+ + P + VA+K + + F E ++ + H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLY------SHKYTLNIQQRLDIMIDVASALEYLH 858
I + ++LE M G L+ +L S +L + L + D+A +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 859 HGHPTPVIHCDLKPSNVLLD---DDTVAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
H IH D+ N LL VA + DFG+++ + + +M P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFT 940
E EGI ++ D +SFG+L+ E F+
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 30/211 (14%)
Query: 1343 LGTGIFSSVYKATFADGTN------AAIK----IFSLQEDRALKSFDAECEVMRRIRHRN 1392
LG G F VY+ + N A+K ++S Q++ F E ++ + H+N
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDEL---DFLMEALIISKFNHQN 109
Query: 1393 LAKI--VSSCSNPGFKALILQYMPQGSLEKWLY------SHNYLLNIEQRLDIMIDVACA 1444
+ + VS S P F ++L+ M G L+ +L S L + L + D+AC
Sbjct: 110 IVRCIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLD---DDMVAHLGDFGIAK-LLDGVDSMKQTMTLATI 1500
+YL + + IH D+ N LL VA +GDFG+A+ + K + +
Sbjct: 168 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 1501 GYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+M PE EGI ++ D +SFG+L+ E +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVF-NLQLDGAIKSFDAECEVLRRVRHRNLVK 804
+G G+FG VY+ + P + VA+K + + F E ++ + H+N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLY------SHKYTLNIQQRLDIMIDVASALEYLH 858
I + ++LE M G L+ +L S +L + L + D+A +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 859 HGHPTPVIHCDLKPSNVLLD---DDTVAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
H IH D+ N LL VA + DFG+++ + + +M P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFT 940
E EGI ++ D +SFG+L+ E F+
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 1343 LGTGIFSSVYKATFA----DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAK 1395
LG G F VY+ + D + + + +L E ++ F E ++ + H+N+ +
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 1396 I--VSSCSNPGFKALILQYMPQGSLEKWLY------SHNYLLNIEQRLDIMIDVACALEY 1447
VS S P F ++L+ M G L+ +L S L + L + D+AC +Y
Sbjct: 98 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 1448 LHQGYSTSIIHCDLKPSNVLLD---DDMVAHLGDFGIAK-LLDGVDSMKQTMTLATIGYM 1503
L + + IH D+ N LL VA +GDFG+A+ + K + + +M
Sbjct: 156 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE EGI ++ D +SFG+L+ E +
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 63/207 (30%), Positives = 94/207 (45%), Gaps = 13/207 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNV-AIKV-FNLQLD--GAIKSFDAECEVLRRVRHRNLVKIIS 807
+G G FG+VY A + A+KV F QL+ G E E+ +RH N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 808 SCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-DVASALEYLHHGHPTPVI 866
+ LILEY P G++ + L K + +QR I ++A+AL Y H VI
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSKR---VI 130
Query: 867 HCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCG 926
H D+KP N+LL ++DFG S S + T Y+ PE +
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEMIEGRMHDEKV 187
Query: 927 DVYSFGILMIETFTRKMPTDEMFTGET 953
D++S G+L E K P + ET
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQET 214
Score = 62.8 bits (151), Expect = 2e-09, Method: Composition-based stats.
Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 14/234 (5%)
Query: 1333 ATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKI-FSLQEDRA--LKSFDAECEVMRRI 1388
A F LG G F +VY A A+K+ F Q ++A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVACALEY 1447
RH N+ ++ + LIL+Y P G++ + L + EQR I ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSY 123
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
H S +IH D+KP N+LL + DFG + S ++ T+ Y+ PE
Sbjct: 124 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEM 177
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTD 1560
+ D++S G+L E L + P + E + VE + PD VT+
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVF-NLQLDGAIKSFDAECEVLRRVRHRNLVK 804
+G G+FG VY+ + P + VA+K + + F E ++ + H+N+V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLY------SHKYTLNIQQRLDIMIDVASALEYLH 858
I + ++LE M G L+ +L S +L + L + D+A +YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 859 HGHPTPVIHCDLKPSNVLLD---DDTVAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
H IH D+ N LL VA + DFG+++ + + +M P
Sbjct: 150 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFT 940
E EGI ++ D +SFG+L+ E F+
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFS 232
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 1343 LGTGIFSSVYKATFA----DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAK 1395
LG G F VY+ + D + + + +L E ++ F E ++ + H+N+ +
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 1396 I--VSSCSNPGFKALILQYMPQGSLEKWLY------SHNYLLNIEQRLDIMIDVACALEY 1447
VS S P F ++L+ M G L+ +L S L + L + D+AC +Y
Sbjct: 90 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 1448 LHQGYSTSIIHCDLKPSNVLLD---DDMVAHLGDFGIAK-LLDGVDSMKQTMTLATIGYM 1503
L + + IH D+ N LL VA +GDFG+A+ + K + + +M
Sbjct: 148 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 204
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE EGI ++ D +SFG+L+ E +
Sbjct: 205 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 67/240 (27%), Positives = 95/240 (39%), Gaps = 18/240 (7%)
Query: 740 QRLTDGFSESNL-----IGAGSFGSVYKAT--LPYGMNVAIKVFNLQLD-----GAIKSF 787
Q LT E +L +G GSFG V + P G V++ V L+ D A+ F
Sbjct: 3 QSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF 62
Query: 788 DAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIM 847
E + + HRNL+++ K ++ E P GSL L H+ +
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 121
Query: 848 IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS--VTQTMT 905
+ VA + YL IH DL N+LL + + DFG+ + L D V Q
Sbjct: 122 VQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 178
Query: 906 LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
F + APE S D + FG+ + E FT G L K +E RL
Sbjct: 179 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 238
Score = 60.5 bits (145), Expect = 8e-09, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 1343 LGTGIFSSVYKATF--ADGTNAAIKIFSLQED-----RALKSFDAECEVMRRIRHRNLAK 1395
LG G F V + + G ++ + L+ D A+ F E M + HRNL +
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSH--NYLLNIEQRLDIMIDVACALEYLHQGYS 1453
+ P K ++ + P GSL L H ++LL R + VA + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---S 133
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS--MKQTMTLATIGYMAPEYGSEG 1511
IH DL N+LL + +GDFG+ + L D + Q + APE
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 1512 IVSTSGDVYSFGILMMETLT 1531
S + D + FG+ + E T
Sbjct: 194 TFSHASDTWMFGVTLWEMFT 213
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 67/240 (27%), Positives = 95/240 (39%), Gaps = 18/240 (7%)
Query: 740 QRLTDGFSESNL-----IGAGSFGSVYKAT--LPYGMNVAIKVFNLQLD-----GAIKSF 787
Q LT E +L +G GSFG V + P G V++ V L+ D A+ F
Sbjct: 3 QSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF 62
Query: 788 DAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIM 847
E + + HRNL+++ K ++ E P GSL L H+ +
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 121
Query: 848 IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS--VTQTMT 905
+ VA + YL IH DL N+LL + + DFG+ + L D V Q
Sbjct: 122 VQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 178
Query: 906 LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
F + APE S D + FG+ + E FT G L K +E RL
Sbjct: 179 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 238
Score = 60.5 bits (145), Expect = 8e-09, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 1343 LGTGIFSSVYKATF--ADGTNAAIKIFSLQED-----RALKSFDAECEVMRRIRHRNLAK 1395
LG G F V + + G ++ + L+ D A+ F E M + HRNL +
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSH--NYLLNIEQRLDIMIDVACALEYLHQGYS 1453
+ P K ++ + P GSL L H ++LL R + VA + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---S 133
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS--MKQTMTLATIGYMAPEYGSEG 1511
IH DL N+LL + +GDFG+ + L D + Q + APE
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 1512 IVSTSGDVYSFGILMMETLT 1531
S + D + FG+ + E T
Sbjct: 194 TFSHASDTWMFGVTLWEMFT 213
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 65.5 bits (158), Expect = 3e-10, Method: Composition-based stats.
Identities = 55/246 (22%), Positives = 112/246 (45%), Gaps = 31/246 (12%)
Query: 1343 LGTGIFSSVYKATFAD------GTNAAIKIFSLQEDRALKS---FDAECEVMRRIRHRNL 1393
LG G F VY+ D T A+K ++ E +L+ F E VM+ ++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVK--TVNESASLRERIEFLNEASVMKGFTCHHV 79
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLL---------NIEQRLDIMIDVACA 1444
+++ S ++++ M G L+ +L S +++ + + ++A
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQT-MTLATIGYM 1503
+ YL+ + +H DL N ++ D +GDFG+ + + D ++ L + +M
Sbjct: 140 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE-------ESLPD 1556
APE +G+ +TS D++SFG+++ E + + + E LK ++ ++ P+
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 256
Query: 1557 AVTDVI 1562
VTD++
Sbjct: 257 RVTDLM 262
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 22/204 (10%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVFN--LQLDGAIKSFDAECEVLRRVRHRNLV 803
+G GSFG VY+ VA+K N L I+ F E V++ ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 80
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL---------NIQQRLDIMIDVASAL 854
+++ S +++E M G L+ +L S + +Q+ + + ++A +
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFGYMA 913
YL+ +H DL N ++ D + DFG+++ + D + L +MA
Sbjct: 141 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 914 PEYGSEGIVSTCGDVYSFGILMIE 937
PE +G+ +T D++SFG+++ E
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWE 221
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNL---QLDGAIKSFDAECEVLRRVRHRN 801
FS+ IG GSFG+VY A + VAIK + Q + + E L+++RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 802 LVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGH 861
++ L++EY GS L HK L Q ++I AL+ L + H
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPL---QEVEIAAVTHGALQGLAYLH 132
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY---GS 918
+IH D+K N+LL + + L DFG + ++ + T +MAPE
Sbjct: 133 SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM-----APANXFVGTPYWMAPEVILAMD 187
Query: 919 EGIVSTCGDVYSFGILMIETFTRKMP 944
EG DV+S GI IE RK P
Sbjct: 188 EGQYDGKVDVWSLGITCIELAERKPP 213
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 16/210 (7%)
Query: 1337 FSESNLLGTGIFSSVYKATFADGTNA-AIKIFSL---QEDRALKSFDAECEVMRRIRHRN 1392
FS+ +G G F +VY A + AIK S Q + + E ++++RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
+ L+++Y GS L H L Q ++I AL+ L +
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPL---QEVEIAAVTHGALQGLAYLH 132
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY---GS 1509
S ++IH D+K N+LL + + LGDFG A ++ + + T +MAPE
Sbjct: 133 SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF-----VGTPYWMAPEVILAMD 187
Query: 1510 EGIVSTSGDVYSFGILMMETLTRRKPTDDM 1539
EG DV+S GI +E R+ P +M
Sbjct: 188 EGQYDGKVDVWSLGITCIELAERKPPLFNM 217
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Phosphopeptide
Length = 306
Score = 65.5 bits (158), Expect = 3e-10, Method: Composition-based stats.
Identities = 55/246 (22%), Positives = 112/246 (45%), Gaps = 31/246 (12%)
Query: 1343 LGTGIFSSVYKATFAD------GTNAAIKIFSLQEDRALKS---FDAECEVMRRIRHRNL 1393
LG G F VY+ D T A+K ++ E +L+ F E VM+ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVK--TVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLL---------NIEQRLDIMIDVACA 1444
+++ S ++++ M G L+ +L S +++ + + ++A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQT-MTLATIGYM 1503
+ YL+ + +H DL N ++ D +GDFG+ + + D ++ L + +M
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE-------ESLPD 1556
APE +G+ +TS D++SFG+++ E + + + E LK ++ ++ P+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 1557 AVTDVI 1562
VTD++
Sbjct: 260 RVTDLM 265
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 22/204 (10%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVFN--LQLDGAIKSFDAECEVLRRVRHRNLV 803
+G GSFG VY+ VA+K N L I+ F E V++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 83
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL---------NIQQRLDIMIDVASAL 854
+++ S +++E M G L+ +L S + +Q+ + + ++A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFGYMA 913
YL+ +H DL N ++ D + DFG+++ + D + L +MA
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 914 PEYGSEGIVSTCGDVYSFGILMIE 937
PE +G+ +T D++SFG+++ E
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVF-NLQLDGAIKSFDAECEVLRRVRHRNLVK 804
+G G+FG VY+ + P + VA+K + + F E ++ + H+N+V+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLY------SHKYTLNIQQRLDIMIDVASALEYLH 858
I + ++LE M G L+ +L S +L + L + D+A +YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 859 HGHPTPVIHCDLKPSNVLLD---DDTVAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
H IH D+ N LL VA + DFG+++ + + +M P
Sbjct: 175 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFT 940
E EGI ++ D +SFG+L+ E F+
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFS 257
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 1343 LGTGIFSSVYKATFA----DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAK 1395
LG G F VY+ + D + + + +L E ++ F E ++ + H+N+ +
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 1396 I--VSSCSNPGFKALILQYMPQGSLEKWLY------SHNYLLNIEQRLDIMIDVACALEY 1447
VS S P F ++L+ M G L+ +L S L + L + D+AC +Y
Sbjct: 115 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 1448 LHQGYSTSIIHCDLKPSNVLLD---DDMVAHLGDFGIAK-LLDGVDSMKQTMTLATIGYM 1503
L + + IH D+ N LL VA +GDFG+A+ + K + + +M
Sbjct: 173 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 229
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE EGI ++ D +SFG+L+ E +
Sbjct: 230 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With A Bisubstrate Inhibitor
Length = 306
Score = 65.5 bits (158), Expect = 3e-10, Method: Composition-based stats.
Identities = 55/246 (22%), Positives = 112/246 (45%), Gaps = 31/246 (12%)
Query: 1343 LGTGIFSSVYKATFAD------GTNAAIKIFSLQEDRALKS---FDAECEVMRRIRHRNL 1393
LG G F VY+ D T A+K ++ E +L+ F E VM+ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVK--TVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLL---------NIEQRLDIMIDVACA 1444
+++ S ++++ M G L+ +L S +++ + + ++A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQT-MTLATIGYM 1503
+ YL+ + +H DL N ++ D +GDFG+ + + D ++ L + +M
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE-------ESLPD 1556
APE +G+ +TS D++SFG+++ E + + + E LK ++ ++ P+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 1557 AVTDVI 1562
VTD++
Sbjct: 260 RVTDLM 265
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 22/204 (10%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVFN--LQLDGAIKSFDAECEVLRRVRHRNLV 803
+G GSFG VY+ VA+K N L I+ F E V++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 83
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL---------NIQQRLDIMIDVASAL 854
+++ S +++E M G L+ +L S + +Q+ + + ++A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFGYMA 913
YL+ +H DL N ++ D + DFG+++ + D + L +MA
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 914 PEYGSEGIVSTCGDVYSFGILMIE 937
PE +G+ +T D++SFG+++ E
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ L+K++ + T + + + + L + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 125 HR---VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 180
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 181 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 215
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ L+K++ + L I L + L L QG
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSM-DLKKFM-DASALTGIPLPL-----IKSYLFQLLQGLA 120
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--Y 1507
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILL 179
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 180 GCK-YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.1 bits (157), Expect = 3e-10, Method: Composition-based stats.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 14/214 (6%)
Query: 1329 ELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECE-VMRR 1387
+++L F +LG G F V+ A F TN I +L++D L D EC V +R
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKK-TNQFFAIKALKKDVVLMDDDVECTMVEKR 70
Query: 1388 I-----RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS-HNYLLNIEQRLDIMIDV 1441
+ H L + + +++Y+ G L + S H + ++ + ++
Sbjct: 71 VLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF--DLSRATFYAAEI 128
Query: 1442 ACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIG 1501
L++LH S I++ DLK N+LLD D + DFG+ K + + K T
Sbjct: 129 ILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK-ENMLGDAKTNEFCGTPD 184
Query: 1502 YMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
Y+APE + S D +SFG+L+ E L + P
Sbjct: 185 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
Score = 53.9 bits (128), Expect = 8e-07, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 15/219 (6%)
Query: 733 RISYQELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECE 792
R S Q ++ D F ++G GSFG V+ A N + L+ D + D EC
Sbjct: 8 RPSLQIKLKIED-FELHKMLGKGSFGKVFLAEFK-KTNQFFAIKALKKDVVLMDDDVECT 65
Query: 793 VL-RRV-----RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLD 845
++ +RV H L + + ++EY+ G L + S HK+ L+ +
Sbjct: 66 MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS--RATF 123
Query: 846 IMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT 905
++ L++LH +++ DLK N+LLD D ++DFG+ K D+ T
Sbjct: 124 YAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC 180
Query: 906 LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMP 944
T Y+APE + D +SFG+L+ E + P
Sbjct: 181 -GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVF-NLQLDGAIKSFDAECEVLRRVRHRNLVK 804
+G G+FG VY+ + P + VA+K + + F E ++ + H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLY------SHKYTLNIQQRLDIMIDVASALEYLH 858
I + ++LE M G L+ +L S +L + L + D+A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 859 HGHPTPVIHCDLKPSNVLLD---DDTVAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
H IH D+ N LL VA + DFG+++ + + +M P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFT 940
E EGI ++ D +SFG+L+ E F+
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 1343 LGTGIFSSVYKATFA----DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAK 1395
LG G F VY+ + D + + + +L E ++ F E ++ + H+N+ +
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 1396 I--VSSCSNPGFKALILQYMPQGSLEKWLY------SHNYLLNIEQRLDIMIDVACALEY 1447
VS S P F ++L+ M G L+ +L S L + L + D+AC +Y
Sbjct: 99 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 1448 LHQGYSTSIIHCDLKPSNVLLD---DDMVAHLGDFGIAK-LLDGVDSMKQTMTLATIGYM 1503
L + + IH D+ N LL VA +GDFG+A+ + K + + +M
Sbjct: 157 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE EGI ++ D +SFG+L+ E +
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 65.1 bits (157), Expect = 3e-10, Method: Composition-based stats.
Identities = 62/223 (27%), Positives = 89/223 (39%), Gaps = 13/223 (5%)
Query: 752 IGAGSFGSVYKAT--LPYGMNVAIKVFNLQLD-----GAIKSFDAECEVLRRVRHRNLVK 804
+G GSFG V + P G V++ V L+ D A+ F E + + HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
+ K ++ E P GSL L H+ + + VA + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR--- 131
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS--VTQTMTLATFGYMAPEYGSEGIV 922
IH DL N+LL + + DFG+ + L D V Q F + APE
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 191
Query: 923 STCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
S D + FG+ + E FT G L K +E RL
Sbjct: 192 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 234
Score = 60.5 bits (145), Expect = 8e-09, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 1343 LGTGIFSSVYKATF--ADGTNAAIKIFSLQED-----RALKSFDAECEVMRRIRHRNLAK 1395
LG G F V + + G ++ + L+ D A+ F E M + HRNL +
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSH--NYLLNIEQRLDIMIDVACALEYLHQGYS 1453
+ P K ++ + P GSL L H ++LL R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---S 129
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS--MKQTMTLATIGYMAPEYGSEG 1511
IH DL N+LL + +GDFG+ + L D + Q + APE
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 1512 IVSTSGDVYSFGILMMETLT 1531
S + D + FG+ + E T
Sbjct: 190 TFSHASDTWMFGVTLWEMFT 209
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 65.1 bits (157), Expect = 3e-10, Method: Composition-based stats.
Identities = 62/223 (27%), Positives = 89/223 (39%), Gaps = 13/223 (5%)
Query: 752 IGAGSFGSVYKAT--LPYGMNVAIKVFNLQLD-----GAIKSFDAECEVLRRVRHRNLVK 804
+G GSFG V + P G V++ V L+ D A+ F E + + HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
+ K ++ E P GSL L H+ + + VA + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR--- 131
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS--VTQTMTLATFGYMAPEYGSEGIV 922
IH DL N+LL + + DFG+ + L D V Q F + APE
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTF 191
Query: 923 STCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
S D + FG+ + E FT G L K +E RL
Sbjct: 192 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 234
Score = 60.5 bits (145), Expect = 8e-09, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 1343 LGTGIFSSVYKATF--ADGTNAAIKIFSLQED-----RALKSFDAECEVMRRIRHRNLAK 1395
LG G F V + + G ++ + L+ D A+ F E M + HRNL +
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSH--NYLLNIEQRLDIMIDVACALEYLHQGYS 1453
+ P K ++ + P GSL L H ++LL R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---S 129
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS--MKQTMTLATIGYMAPEYGSEG 1511
IH DL N+LL + +GDFG+ + L D + Q + APE
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 1512 IVSTSGDVYSFGILMMETLT 1531
S + D + FG+ + E T
Sbjct: 190 TFSHASDTWMFGVTLWEMFT 209
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 65.1 bits (157), Expect = 3e-10, Method: Composition-based stats.
Identities = 62/223 (27%), Positives = 89/223 (39%), Gaps = 13/223 (5%)
Query: 752 IGAGSFGSVYKAT--LPYGMNVAIKVFNLQLD-----GAIKSFDAECEVLRRVRHRNLVK 804
+G GSFG V + P G V++ V L+ D A+ F E + + HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
+ K ++ E P GSL L H+ + + VA + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR--- 131
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS--VTQTMTLATFGYMAPEYGSEGIV 922
IH DL N+LL + + DFG+ + L D V Q F + APE
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 191
Query: 923 STCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
S D + FG+ + E FT G L K +E RL
Sbjct: 192 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 234
Score = 60.5 bits (145), Expect = 8e-09, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 1343 LGTGIFSSVYKATF--ADGTNAAIKIFSLQED-----RALKSFDAECEVMRRIRHRNLAK 1395
LG G F V + + G ++ + L+ D A+ F E M + HRNL +
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSH--NYLLNIEQRLDIMIDVACALEYLHQGYS 1453
+ P K ++ + P GSL L H ++LL R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---S 129
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS--MKQTMTLATIGYMAPEYGSEG 1511
IH DL N+LL + +GDFG+ + L D + Q + APE
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 1512 IVSTSGDVYSFGILMMETLT 1531
S + D + FG+ + E T
Sbjct: 190 TFSHASDTWMFGVTLWEMFT 209
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVF-NLQLDGAIKSFDAECEVLRRVRHRNLVK 804
+G G+FG VY+ + P + VA+K + + F E ++ + H+N+V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLY------SHKYTLNIQQRLDIMIDVASALEYLH 858
I + ++LE M G L+ +L S +L + L + D+A +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 859 HGHPTPVIHCDLKPSNVLLD---DDTVAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
H IH D+ N LL VA + DFG+++ + + +M P
Sbjct: 165 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFT 940
E EGI ++ D +SFG+L+ E F+
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFS 247
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 1343 LGTGIFSSVYKATFA----DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAK 1395
LG G F VY+ + D + + + +L E ++ F E ++ + H+N+ +
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 1396 I--VSSCSNPGFKALILQYMPQGSLEKWLY------SHNYLLNIEQRLDIMIDVACALEY 1447
VS S P F ++L+ M G L+ +L S L + L + D+AC +Y
Sbjct: 105 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 1448 LHQGYSTSIIHCDLKPSNVLLD---DDMVAHLGDFGIAK-LLDGVDSMKQTMTLATIGYM 1503
L + + IH D+ N LL VA +GDFG+A+ + K + + +M
Sbjct: 163 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 219
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE EGI ++ D +SFG+L+ E +
Sbjct: 220 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 23/221 (10%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIKVFN-LQLD-GAIKSFDAECEVLRRVRHRNLVKIISS 808
IG G+F V A + G VAIK+ + QL+ +++ E +++ + H N+VK+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 809 CSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHC 868
LI+EY G + +L +H + R + SA++Y H ++H
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQKR---IVHR 135
Query: 869 DLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF----GYMAPE-YGSEGIVS 923
DLK N+LLD D ++DFG S + T L TF Y APE + +
Sbjct: 136 DLKAENLLLDADMNIKIADFGFS------NEFTVGGKLDTFCGSPPYAAPELFQGKKYDG 189
Query: 924 TCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLR 964
DV+S G+++ + +P F G+ +LK+ E LR
Sbjct: 190 PEVDVWSLGVILYTLVSGSLP----FDGQ-NLKELRERVLR 225
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 10/199 (5%)
Query: 1343 LGTGIFSSVYKAT-FADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G G F+ V A G AIKI + +L+ E +M+ + H N+ K+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
LI++Y G + +L +H + E R + A++Y HQ I+H
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQ---KRIVHR 135
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE-YGSEGIVSTSGD 1518
DLK N+LLD DM + DFG + + K + Y APE + + D
Sbjct: 136 DLKAENLLLDADMNIKIADFGFSN--EFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVD 193
Query: 1519 VYSFGILMMETLTRRKPTD 1537
V+S G+++ ++ P D
Sbjct: 194 VWSLGVILYTLVSGSLPFD 212
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVF-NLQLDGAIKSFDAECEVLRRVRHRNLVK 804
+G G+FG VY+ + P + VA+K + + F E ++ + H+N+V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLY------SHKYTLNIQQRLDIMIDVASALEYLH 858
I + ++LE M G L+ +L S +L + L + D+A +YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 859 HGHPTPVIHCDLKPSNVLLD---DDTVAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
H IH D+ N LL VA + DFG+++ + + +M P
Sbjct: 185 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFT 940
E EGI ++ D +SFG+L+ E F+
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFS 267
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 1343 LGTGIFSSVYKATFA----DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAK 1395
LG G F VY+ + D + + + +L E ++ F E ++ + H+N+ +
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 1396 I--VSSCSNPGFKALILQYMPQGSLEKWLY------SHNYLLNIEQRLDIMIDVACALEY 1447
VS S P F ++L+ M G L+ +L S L + L + D+AC +Y
Sbjct: 125 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 1448 LHQGYSTSIIHCDLKPSNVLLD---DDMVAHLGDFGIAK-LLDGVDSMKQTMTLATIGYM 1503
L + + IH D+ N LL VA +GDFG+A+ + K + + +M
Sbjct: 183 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 239
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE EGI ++ D +SFG+L+ E +
Sbjct: 240 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ L+K++ + T + + + + L + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 123 HR---VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 178
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 179 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 213
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ L+K++ + L I L + L L QG
Sbjct: 66 VKLLDVIHTENKLYLVFEFLSM-DLKKFM-DASALTGIPLPL-----IKSYLFQLLQGLA 118
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--Y 1507
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILL 177
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 178 GCK-YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVF-NLQLDGAIKSFDAECEVLRRVRHRNLVK 804
+G G+FG VY+ + P + VA+K + + F E ++ + H+N+V+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLY------SHKYTLNIQQRLDIMIDVASALEYLH 858
I + ++LE M G L+ +L S +L + L + D+A +YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 859 HGHPTPVIHCDLKPSNVLLD---DDTVAHLSDFGISKLLDGEDSVTQT-MTLATFGYMAP 914
H IH D+ N LL VA + DFG+++ + + + +M P
Sbjct: 199 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFT 940
E EGI ++ D +SFG+L+ E F+
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFS 281
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 1343 LGTGIFSSVYKATFA----DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAK 1395
LG G F VY+ + D + + + +L E ++ F E ++ + H+N+ +
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 1396 I--VSSCSNPGFKALILQYMPQGSLEKWLY------SHNYLLNIEQRLDIMIDVACALEY 1447
VS S P F ++L+ M G L+ +L S L + L + D+AC +Y
Sbjct: 139 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 1448 LHQGYSTSIIHCDLKPSNVLLD---DDMVAHLGDFGIAK-LLDGVDSMKQTMTLATIGYM 1503
L + + IH D+ N LL VA +GDFG+A+ + K + + +M
Sbjct: 197 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 253
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE EGI ++ D +SFG+L+ E +
Sbjct: 254 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 742 LTDGFSESNLIGAGSFGS----VYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV 797
+DG+ IG GS+ V+KAT M A+KV +D + + E E+L R
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKAT---NMEYAVKV----IDKSKRDPSEEIEILLRY 77
Query: 798 -RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
+H N++ + + L+ E M G L + K+ + ++ ++ + +EY
Sbjct: 78 GQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF-FSEREASFVLHTIGKTVEY 136
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDT----VAHLSDFGISKLLDGEDSVTQTMTLATFGYM 912
LH V+H DLKPSN+L D++ + DFG +K L E+ + T T ++
Sbjct: 137 LH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT-PCYTANFV 192
Query: 913 APEY-GSEGIVSTCGDVYSFGILM 935
APE +G C D++S GIL+
Sbjct: 193 APEVLKRQGYDEGC-DIWSLGILL 215
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 1334 TNGFSESNLLGTGIFSS----VYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRI- 1388
++G+ +G G +S V+KAT A+K+ D++ + E E++ R
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKAT---NMEYAVKVI----DKSKRDPSEEIEILLRYG 78
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYL 1448
+H N+ + + L+ + M G L + + E ++ + +EYL
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-VLHTIGKTVEYL 137
Query: 1449 HQGYSTSIIHCDLKPSNVLLDDD----MVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
H S ++H DLKPSN+L D+ + DFG AK L + + T T ++A
Sbjct: 138 H---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT-PCYTANFVA 193
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
PE D++S GIL+ L P
Sbjct: 194 PEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIKVFN-LQLD-GAIKSFDAECEVLRRVRHRNLVKIISS 808
IG G+F V A + G VA+K+ + QL+ +++ E +++ + H N+VK+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 809 CSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHC 868
L++EY G + +L +H + R + SA++Y H + ++H
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKY---IVHR 138
Query: 869 DLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF----GYMAPE-YGSEGIVS 923
DLK N+LLD D ++DFG S + T L TF Y APE + +
Sbjct: 139 DLKAENLLLDGDMNIKIADFGFS------NEFTVGNKLDTFCGSPPYAAPELFQGKKYDG 192
Query: 924 TCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLR 964
DV+S G+++ + +P F G+ +LK+ E LR
Sbjct: 193 PEVDVWSLGVILYTLVSGSLP----FDGQ-NLKELRERVLR 228
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 10/199 (5%)
Query: 1343 LGTGIFSSVYKATFA-DGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G G F+ V A G A+KI + +L+ E +M+ + H N+ K+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
L+++Y G + +L +H + E R + A++Y HQ Y I+H
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKY---IVHR 138
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE-YGSEGIVSTSGD 1518
DLK N+LLD DM + DFG + + K + Y APE + + D
Sbjct: 139 DLKAENLLLDGDMNIKIADFGFSN--EFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 196
Query: 1519 VYSFGILMMETLTRRKPTD 1537
V+S G+++ ++ P D
Sbjct: 197 VWSLGVILYTLVSGSLPFD 215
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.1 bits (157), Expect = 3e-10, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 36/220 (16%)
Query: 755 GSFGSVYKATLPYGMN--VAIKVFNLQLDGAIKSFDAECEVLRR--VRHRNLVKIISS-- 808
G FG V+KA L MN VA+K+F LQ +S+ +E E+ ++H NL++ I++
Sbjct: 26 GRFGCVWKAQL---MNDFVAVKIFPLQDK---QSWQSEREIFSTPGMKHENLLQFIAAEK 79
Query: 809 -CSNHGFKA-LILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH------- 859
SN + LI + +GSL +L + T N + + ++ L YLH
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDYLKGNIITWN--ELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 860 -GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGIS-KLLDGEDSVTQTMTLATFGYMAPEYG 917
GH + H D K NVLL D A L+DFG++ + G+ + T YMAPE
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEV- 196
Query: 918 SEGIVSTCG------DVYSFGILMIETFTR----KMPTDE 947
EG ++ D+Y+ G+++ E +R P DE
Sbjct: 197 LEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDE 236
Score = 63.9 bits (154), Expect = 6e-10, Method: Composition-based stats.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
Query: 1346 GIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRR--IRHRNLAKIVSS---C 1400
G F V+KA + A+KIF LQ+ +S+ +E E+ ++H NL + +++
Sbjct: 26 GRFGCVWKAQLMNDF-VAVKIFPLQDK---QSWQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 1401 SNPGFKA-LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQ--------G 1451
SN + LI + +GSL +L + ++ + + ++ L YLH+ G
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYLKGN--IITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIA-KLLDGVDSMKQTMTLATIGYMAPEYGSE 1510
+ SI H D K NVLL D+ A L DFG+A + G + T YMAPE E
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEV-LE 198
Query: 1511 GIVSTSG------DVYSFGILMMETLTRRKPTD 1537
G ++ D+Y+ G+++ E ++R K D
Sbjct: 199 GAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+ ++ + T + + + + L + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY--G 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 180
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 181 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 215
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q K + L I L + L L QG
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDL--KTFMDASALTGIPLPL-----IKSYLFQLLQGLA 120
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY-- 1507
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILL 179
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 180 GCK-YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein
Kinase And Immunoglobulin Domains
Length = 491
Score = 65.1 bits (157), Expect = 3e-10, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 14/205 (6%)
Query: 1343 LGTGIFSSVYKAT-FADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
LGTG F V++ T A G N A K + ++ E + M +RH L + +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 1402 NPGFKALILQYMPQGSL-EKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
+ +I ++M G L EK HN ++ ++ ++ M V L ++H+ + +H D
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMHE---NNYVHLD 174
Query: 1461 LKPSNVLLDDDMVAHLG--DFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGD 1518
LKP N++ L DFG+ LD S+K +T T + APE V D
Sbjct: 175 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK--VTTGTAEFAAPEVAEGKPVGYYTD 232
Query: 1519 VYSFGILMMETLTRRKPTDDMFTGE 1543
++S G+L L+ P F GE
Sbjct: 233 MWSVGVLSYILLSGLSP----FGGE 253
Score = 63.2 bits (152), Expect = 1e-09, Method: Composition-based stats.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 12/218 (5%)
Query: 724 DSLSLATWRRISYQELQ----RLTDGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNL 778
D+ W++ Q ++ + D + +G G+FG V++ T G N A K
Sbjct: 27 DNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMT 86
Query: 779 QLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL 838
+ ++ E + + +RH LV + + + +I E+M G L + + +
Sbjct: 87 PHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKM 146
Query: 839 NIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLS--DFGISKLLDG 896
+ + ++ M V L ++H + +H DLKP N++ L DFG++ LD
Sbjct: 147 SEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 203
Query: 897 EDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGIL 934
+ SV T A F APE V D++S G+L
Sbjct: 204 KQSVKVTTGTAEFA--APEVAEGKPVGYYTDMWSVGVL 239
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ Q L+ ++ + T + + + + L + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 122 HR---VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 177
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 178 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 212
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-- 1451
K++ L+ +++ Q K + L I L + L L QG
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDL--KDFMDASALTGIPLPL-----IKSYLFQLLQGLA 117
Query: 1452 --YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--Y 1507
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILL 176
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 177 GCK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine
At 2a Resolution
Length = 345
Score = 65.1 bits (157), Expect = 4e-10, Method: Composition-based stats.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 14/214 (6%)
Query: 1329 ELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECE-VMRR 1387
+++L F +LG G F V+ A F TN I +L++D L D EC V +R
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKK-TNQFFAIKALKKDVVLMDDDVECTMVEKR 69
Query: 1388 I-----RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS-HNYLLNIEQRLDIMIDV 1441
+ H L + + +++Y+ G L + S H + ++ + ++
Sbjct: 70 VLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF--DLSRATFYAAEI 127
Query: 1442 ACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIG 1501
L++LH S I++ DLK N+LLD D + DFG+ K + + K T
Sbjct: 128 ILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK-ENMLGDAKTNXFCGTPD 183
Query: 1502 YMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
Y+APE + S D +SFG+L+ E L + P
Sbjct: 184 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 15/219 (6%)
Query: 733 RISYQELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECE 792
R S Q ++ D F ++G GSFG V+ A N + L+ D + D EC
Sbjct: 7 RPSLQIKLKIED-FILHKMLGKGSFGKVFLAEFK-KTNQFFAIKALKKDVVLMDDDVECT 64
Query: 793 VL-RRV-----RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYS-HKYTLNIQQRLD 845
++ +RV H L + + ++EY+ G L + S HK+ L+ +
Sbjct: 65 MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS--RATF 122
Query: 846 IMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT 905
++ L++LH +++ DLK N+LLD D ++DFG+ K D+ T
Sbjct: 123 YAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC 179
Query: 906 LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMP 944
T Y+APE + D +SFG+L+ E + P
Sbjct: 180 -GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVF-NLQLDGAIKSFDAECEVLRRVRHRNLVK 804
+G G+FG VY+ + P + VA+K + + F E ++ + H+N+V+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLY------SHKYTLNIQQRLDIMIDVASALEYLH 858
I + ++LE M G L+ +L S +L + L + D+A +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 859 HGHPTPVIHCDLKPSNVLLD---DDTVAHLSDFGISKLLDGEDSVTQT-MTLATFGYMAP 914
H IH D+ N LL VA + DFG+++ + + + +M P
Sbjct: 176 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFT 940
E EGI ++ D +SFG+L+ E F+
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS 258
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 1343 LGTGIFSSVYKATFA----DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAK 1395
LG G F VY+ + D + + + +L E ++ F E ++ + H+N+ +
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 1396 I--VSSCSNPGFKALILQYMPQGSLEKWLY------SHNYLLNIEQRLDIMIDVACALEY 1447
VS S P F ++L+ M G L+ +L S L + L + D+AC +Y
Sbjct: 116 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 1448 LHQGYSTSIIHCDLKPSNVLLD---DDMVAHLGDFGIAK-LLDGVDSMKQTMTLATIGYM 1503
L + + IH D+ N LL VA +GDFG+A+ + K + + +M
Sbjct: 174 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 230
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE EGI ++ D +SFG+L+ E +
Sbjct: 231 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 64.7 bits (156), Expect = 4e-10, Method: Composition-based stats.
Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 742 LTDGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVR 798
+TD + IG G+F V + L G A K+ N + A + + E + R ++
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 799 HRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH 858
H N+V++ S S GF L+ + + G L + + + +Y D + LE +
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHCIQQILEAVL 117
Query: 859 HGHPTPVIHCDLKPSNVLLDDD---TVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H V+H DLKP N+LL L+DFG++ + G+ T GY++PE
Sbjct: 118 HCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA-GTPGYLSPE 176
Query: 916 YGSEGIVSTCGDVYSFGILM 935
+ D+++ G+++
Sbjct: 177 VLRKEAYGKPVDIWACGVIL 196
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 1343 LGTGIFSSVYKAT-FADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G G FS V + G A KI + ++ R + + E + R ++H N+ ++ S
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
S GF L+ + G L + + + Y D + LE + + ++H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYY----SEADASHCIQQILEAVLHCHQMGVVHR 127
Query: 1460 DLKPSNVLLDDD---MVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTS 1516
DLKP N+LL L DFG+A + G D T GY++PE +
Sbjct: 128 DLKPENLLLASKCKGAAVKLADFGLAIEVQG-DQQAWFGFAGTPGYLSPEVLRKEAYGKP 186
Query: 1517 GDVYSFGILMMETLTRRKP 1535
D+++ G+++ L P
Sbjct: 187 VDIWACGVILYILLVGYPP 205
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G+FG VYKA + A KV + + + ++ + E ++L H N+VK++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 811 NHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+++E+ G+++ + + L Q I + L+ L++ H +IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQ---IQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 871 KPSNVLLDDDTVAHLSDFGIS----KLLDGEDSVTQTMTLATFGYMAPEY-----GSEGI 921
K N+L D L+DFG+S + + DS + T +MAPE +
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSF-----IGTPYWMAPEVVMCETSKDRP 216
Query: 922 VSTCGDVYSFGILMIETFTRKMPTDEM 948
DV+S GI +IE + P E+
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHEL 243
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 30/221 (13%)
Query: 1343 LGTGIFSSVYKATFADGTN-AAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
LG G F VYKA + + AA K+ + + L+ + E +++ H N+ K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 1402 NPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRL-DIMIDVAC-----ALEYLHQGYSTS 1455
+++++ G+++ +L +E+ L + I V C AL YLH
Sbjct: 105 YENNLWILIEFCAGGAVDA------VMLELERPLTESQIQVVCKQTLDALNYLH---DNK 155
Query: 1456 IIHCDLKPSNVLLDDDMVAHLGDFGIA----KLLDGVDSMKQTMTLATIGYMAPEY---- 1507
IIH DLK N+L D L DFG++ + + DS + T +MAPE
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSF-----IGTPYWMAPEVVMCE 210
Query: 1508 -GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK 1547
+ DV+S GI ++E P ++ V LK
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLK 251
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVF-NLQLDGAIKSFDAECEVLRRVRHRNLVK 804
+G G+FG VY+ + P + VA+K + + F E ++ + H+N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLY------SHKYTLNIQQRLDIMIDVASALEYLH 858
I + +++E M G L+ +L S +L + L + D+A +YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 859 HGHPTPVIHCDLKPSNVLLD---DDTVAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
H IH D+ N LL VA + DFG+++ + + +M P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFT 940
E EGI ++ D +SFG+L+ E F+
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 1343 LGTGIFSSVYKATFA----DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAK 1395
LG G F VY+ + D + + + +L E ++ F E ++ + H+N+ +
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 1396 I--VSSCSNPGFKALILQYMPQGSLEKWLY------SHNYLLNIEQRLDIMIDVACALEY 1447
VS S P F ++++ M G L+ +L S L + L + D+AC +Y
Sbjct: 98 CIGVSLQSLPRF--ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 1448 LHQGYSTSIIHCDLKPSNVLLD---DDMVAHLGDFGIAK-LLDGVDSMKQTMTLATIGYM 1503
L + + IH D+ N LL VA +GDFG+A+ + K + + +M
Sbjct: 156 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE EGI ++ D +SFG+L+ E +
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 27/222 (12%)
Query: 737 QELQR----LTDGFSESNLIGAGSFG----SVYKATLPYGMNVAIKVFNLQLDGAIKSFD 788
Q+L R TDG+ IG GS+ ++KAT A+K+ +D + +
Sbjct: 11 QQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKAT---NXEFAVKI----IDKSKRDPT 63
Query: 789 AECEVLRRV-RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIM 847
E E+L R +H N++ + + + ++ E G L + K+ + ++ ++
Sbjct: 64 EEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF-FSEREASAVL 122
Query: 848 IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDT----VAHLSDFGISKLLDGEDSVTQT 903
+ +EYLH V+H DLKPSN+L D++ + DFG +K L E+ + T
Sbjct: 123 FTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXT 179
Query: 904 MTLATFGYMAPEY-GSEGIVSTCGDVYSFGILMIETFTRKMP 944
T ++APE +G + C D++S G+L+ T P
Sbjct: 180 PCY-TANFVAPEVLERQGYDAAC-DIWSLGVLLYTXLTGYTP 219
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 17/209 (8%)
Query: 1334 TNGFSESNLLGTGIFSSVYKATFADGTNA--AIKIFSLQEDRALKSFDAECEVMRRI-RH 1390
T+G+ +G G +S V K TN A+KI D++ + E E++ R +H
Sbjct: 21 TDGYEVKEDIGVGSYS-VCKRCIHKATNXEFAVKII----DKSKRDPTEEIEILLRYGQH 75
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQ 1450
N+ + + + ++ + G L + + E ++ + +EYLH
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASA-VLFTITKTVEYLH- 133
Query: 1451 GYSTSIIHCDLKPSNVLLDDD----MVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE 1506
+ ++H DLKPSN+L D+ + DFG AK L + + T T ++APE
Sbjct: 134 --AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TANFVAPE 190
Query: 1507 YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
+ D++S G+L+ LT P
Sbjct: 191 VLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVF-NLQLDGAIKSFDAECEVLRRVRHRNLVK 804
+G G+FG VY+ + P + VA+K + + F E ++ + H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLY------SHKYTLNIQQRLDIMIDVASALEYLH 858
I + ++LE M G L+ +L S +L + L + D+A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 859 HGHPTPVIHCDLKPSNVLLD---DDTVAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
H IH D+ N LL VA + DFG+++ + + +M P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFT 940
E EGI ++ D +SFG+L+ E F+
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 1343 LGTGIFSSVYKATFA----DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAK 1395
LG G F VY+ + D + + + +L E ++ F E ++ + H+N+ +
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 1396 I--VSSCSNPGFKALILQYMPQGSLEKWLY------SHNYLLNIEQRLDIMIDVACALEY 1447
VS S P F ++L+ M G L+ +L S L + L + D+AC +Y
Sbjct: 99 CIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 1448 LHQGYSTSIIHCDLKPSNVLLD---DDMVAHLGDFGIAK-LLDGVDSMKQTMTLATIGYM 1503
L + + IH D+ N LL VA +GDFG+A+ + K + + +M
Sbjct: 157 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWM 213
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE EGI ++ D +SFG+L+ E +
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 23/208 (11%)
Query: 752 IGAGSFGSVYKATLPYGM-------NVAIKVFNLQLDGAIK-SFDAECEVLRRV-RHRNL 802
+GAG+FG V +AT +G+ VA+K+ K + +E +++ + +H N+
Sbjct: 46 LGAGAFGKVVEAT-AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 104
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT---------LNIQQRLDIMIDVASA 853
V ++ +C++ G +I EY G L +L L ++ L VA
Sbjct: 105 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 164
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTMTLATFGYM 912
+ +L + IH D+ NVLL + VA + DFG+++ +++ + + + +M
Sbjct: 165 MAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 221
Query: 913 APEYGSEGIVSTCGDVYSFGILMIETFT 940
APE + + + DV+S+GIL+ E F+
Sbjct: 222 APESIFDCVYTVQSDVWSYGILLWEIFS 249
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 21/222 (9%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKAT-FADGTNAAIKIFSLQEDRALKSFDAECEVMR 1386
++ N LG G F V +AT F G A+ +++ ++ D + +M
Sbjct: 31 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 90
Query: 1387 RIR-------HRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL---------LN 1430
++ H N+ ++ +C++ G +I +Y G L +L L
Sbjct: 91 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 150
Query: 1431 IEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVD 1489
+ L VA + +L S + IH D+ NVLL + VA +GDFG+A+ +++ +
Sbjct: 151 LRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 207
Query: 1490 SMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ + + +MAPE + + + DV+S+GIL+ E +
Sbjct: 208 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 33/229 (14%)
Query: 1330 LRLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRI 1388
LR A++ F E +LG G F V KA A D AIK E++ L + +E ++ +
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASL 59
Query: 1389 RH-------------RNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRL 1435
H RN K +++ + ++Y G+L ++S N ++
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDSMK-- 1492
+ + AL Y+H S IIH DLKP N+ +D+ +GDFG+AK + +D +K
Sbjct: 120 RLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 1493 ----------QTMTLATIGYMAPEY-GSEGIVSTSGDVYSFGILMMETL 1530
T + T Y+A E G + D+YS GI+ E +
Sbjct: 177 SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 94/225 (41%), Gaps = 32/225 (14%)
Query: 741 RLTDGFSESNLIGAGSFGSVYKATLPYGMNV-AIKVFNLQLDGAIKSFDAECEVLRRVRH 799
R F E ++G G+FG V KA AIK + + + +E +L + H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 800 -------------RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDI 846
RN VK +++ + +EY G+L ++S LN QQR +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE--NLN-QQRDEY 118
Query: 847 MIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK---------LLDGE 897
LE L + H +IH DLKP N+ +D+ + DFG++K LD +
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 898 D----SVTQTMTLATFGYMAPEY-GSEGIVSTCGDVYSFGILMIE 937
+ S T + T Y+A E G + D+YS GI+ E
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G+FG VYKA + A KV + + + ++ + E ++L H N+VK++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 811 NHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+++E+ G+++ + + L Q I + L+ L++ H +IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQ---IQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 871 KPSNVLLDDDTVAHLSDFGIS----KLLDGEDSVTQTMTLATFGYMAPEY-----GSEGI 921
K N+L D L+DFG+S + + DS + T +MAPE +
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF-----IGTPYWMAPEVVMCETSKDRP 216
Query: 922 VSTCGDVYSFGILMIETFTRKMPTDEM 948
DV+S GI +IE + P E+
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHEL 243
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 36/224 (16%)
Query: 1343 LGTGIFSSVYKATFADGTN-AAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
LG G F VYKA + + AA K+ + + L+ + E +++ H N+ K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 1402 NPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRL-DIMIDVAC-----ALEYLHQGYSTS 1455
+++++ G+++ +L +E+ L + I V C AL YLH
Sbjct: 105 YENNLWILIEFCAGGAVDA------VMLELERPLTESQIQVVCKQTLDALNYLH---DNK 155
Query: 1456 IIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-------LATIGYMAPEY- 1507
IIH DLK N+L D L DFG+ S K T T + T +MAPE
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGV--------SAKNTRTIQRRDSFIGTPYWMAPEVV 207
Query: 1508 ----GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK 1547
+ DV+S GI ++E P ++ V LK
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLK 251
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 23/221 (10%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIKVFN-LQLDGA-IKSFDAECEVLRRVRHRNLVKIISS 808
IG G+F V A + G VA+K+ + QL+ + ++ E +++ + H N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 809 CSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHC 868
L++EY G + +L +H + R + SA++Y H ++H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 869 DLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF----GYMAPE-YGSEGIVS 923
DLK N+LLD D ++DFG S + T L TF Y APE + +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 924 TCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLR 964
DV+S G+++ + +P F G+ +LK+ E LR
Sbjct: 192 PEVDVWSLGVILYTLVSGSLP----FDGQ-NLKELRERVLR 227
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 10/199 (5%)
Query: 1343 LGTGIFSSVYKAT-FADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G G F+ V A G A+KI + +L+ E +M+ + H N+ K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
L+++Y G + +L +H + E R + A++Y HQ + I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE-YGSEGIVSTSGD 1518
DLK N+LLD DM + DFG + + K + Y APE + + D
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 195
Query: 1519 VYSFGILMMETLTRRKPTD 1537
V+S G+++ ++ P D
Sbjct: 196 VWSLGVILYTLVSGSLPFD 214
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 21/210 (10%)
Query: 750 NLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGA--IKSFDAECEVLRRVRHRNLVKIIS 807
LIG G FG VY + VAI++ +++ D +K+F E R+ RH N+V +
Sbjct: 39 ELIGKGRFGQVYHGR--WHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 808 SCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
+C + A+I +L + K L++ + I ++ + YL H ++H
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL---HAKGILH 153
Query: 868 CDLKPSNVLLDDDTVAHLSDFG---ISKLLD-GEDSVTQTMTLATFGYMAPEY------- 916
DLK NV D+ V ++DFG IS +L G + ++APE
Sbjct: 154 KDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPD 212
Query: 917 --GSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ S DV++ G + E R+ P
Sbjct: 213 TEEDKLPFSKHSDVFALGTIWYELHAREWP 242
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 91/226 (40%), Gaps = 21/226 (9%)
Query: 1325 ISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRA--LKSFDAEC 1382
I QE + L+G G F VY + AI++ ++ D LK+F E
Sbjct: 23 IFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREV 80
Query: 1383 EVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVA 1442
R+ RH N+ + +C +P A+I +L + +L++ + I ++
Sbjct: 81 MAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIV 140
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGI----AKLLDGVDSMKQTMTLA 1498
+ YLH + I+H DLK NV D+ V + DFG+ L G K +
Sbjct: 141 KGMGYLH---AKGILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNG 196
Query: 1499 TIGYMAPEY---------GSEGIVSTSGDVYSFGILMMETLTRRKP 1535
+ ++APE + S DV++ G + E R P
Sbjct: 197 WLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 23/221 (10%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIKVFN-LQLDGA-IKSFDAECEVLRRVRHRNLVKIISS 808
IG G+F V A + G VA+K+ + QL+ + ++ E +++ + H N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 809 CSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHC 868
L++EY G + +L +H + R + SA++Y H ++H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 869 DLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF----GYMAPE-YGSEGIVS 923
DLK N+LLD D ++DFG S + T L TF Y APE + +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 924 TCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLR 964
DV+S G+++ + +P F G+ +LK+ E LR
Sbjct: 192 PEVDVWSLGVILYTLVSGSLP----FDGQ-NLKELRERVLR 227
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 10/199 (5%)
Query: 1343 LGTGIFSSVYKAT-FADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G G F+ V A G A+KI + +L+ E +M+ + H N+ K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
L+++Y G + +L +H + E R + A++Y HQ + I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE-YGSEGIVSTSGD 1518
DLK N+LLD DM + DFG + + K + Y APE + + D
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 195
Query: 1519 VYSFGILMMETLTRRKPTD 1537
V+S G+++ ++ P D
Sbjct: 196 VWSLGVILYTLVSGSLPFD 214
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase
Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 64.3 bits (155), Expect = 5e-10, Method: Composition-based stats.
Identities = 47/135 (34%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Query: 1437 IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT 1496
I + + ALE+LH S+IH D+KPSNVL++ + DFGI+ L VD + + +
Sbjct: 114 IAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDDVAKDID 169
Query: 1497 LATIGYMAPEYGSEGI----VSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
YMAPE + + S D++S GI M+E R P D T LK VEE
Sbjct: 170 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE 229
Query: 1553 SLPDAVTDVIDANLL 1567
P D A +
Sbjct: 230 PSPQLPADKFSAEFV 244
Score = 63.2 bits (152), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/120 (37%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 846 IMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT 905
I + + ALE+LH VIH D+KPSNVL++ + DFGIS L D V + +
Sbjct: 114 IAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDDVAKDID 169
Query: 906 LATFGYMAPEYGSEGI----VSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEE 961
YMAPE + + S D++S GI MIE + P D T LK+ VEE
Sbjct: 170 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE 229
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 30/213 (14%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQ---------EDRALKSFDAECEVMRRIRHR- 1391
LG G F V +A F A + +++ E RAL S E +++ I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS---ELKILIHIGHHL 91
Query: 1392 NLAKIVSSCSNPGFKAL-ILQYMPQGSLEKWLYS-----------HNYLLNIEQRLDIMI 1439
N+ ++ +C+ PG + I+++ G+L +L S + L +E +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSF 151
Query: 1440 DVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDSMKQTMTLA 1498
VA +E+L S IH DL N+LL + V + DFG+A+ + D +++
Sbjct: 152 QVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 1499 TIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+L+ E +
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 32/214 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAI----KSFDAECEVLRRVRHR 800
+G G+FG V +A +G++ VA+K+ +GA ++ +E ++L + H
Sbjct: 35 LGRGAFGQVIEADA-FGIDKTATXRTVAVKMLK---EGATHSEHRALMSELKILIHIGHH 90
Query: 801 -NLVKIISSCSNHGFKAL-ILEYMPQGSLEKWLYS-----------HKYTLNIQQRLDIM 847
N+V ++ +C+ G + I+E+ G+L +L S +K L ++ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 848 IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTMTL 906
VA +E+L IH DL N+LL + V + DFG+++ + D V +
Sbjct: 151 FQVAKGMEFLAS---RKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDAR 207
Query: 907 ATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+MAPE + + + DV+SFG+L+ E F+
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 742 LTDGFSESNLIGAGSFGS----VYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV 797
+DG+ IG GS+ V+KAT M A+KV +D + + E E+L R
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKAT---NMEYAVKV----IDKSKRDPSEEIEILLRY 77
Query: 798 -RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
+H N++ + + L+ E M G L + K+ + ++ ++ + +EY
Sbjct: 78 GQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF-FSEREASFVLHTIGKTVEY 136
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDT----VAHLSDFGISKLLDGEDSVTQTMTLATFGYM 912
LH V+H DLKPSN+L D++ + DFG +K L E+ + T T ++
Sbjct: 137 LH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT-PCYTANFV 192
Query: 913 APEY-GSEGIVSTCGDVYSFGILM 935
APE +G C D++S GIL+
Sbjct: 193 APEVLKRQGYDEGC-DIWSLGILL 215
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 1334 TNGFSESNLLGTGIFSS----VYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRI- 1388
++G+ +G G +S V+KAT A+K+ D++ + E E++ R
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKAT---NMEYAVKVI----DKSKRDPSEEIEILLRYG 78
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYL 1448
+H N+ + + L+ + M G L + + E ++ + +EYL
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-VLHTIGKTVEYL 137
Query: 1449 HQGYSTSIIHCDLKPSNVLLDDD----MVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
H S ++H DLKPSN+L D+ + DFG AK L + + T T ++A
Sbjct: 138 H---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT-PCYTANFVA 193
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
PE D++S GIL+ L P
Sbjct: 194 PEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVF-NLQLDGAIKSFDAECEVLRRVRHRNLVK 804
+G G+FG VY+ + P + VA+K + + F E ++ + H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLY------SHKYTLNIQQRLDIMIDVASALEYLH 858
I + +++E M G L+ +L S +L + L + D+A +YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 859 HGHPTPVIHCDLKPSNVLLD---DDTVAHLSDFGISK-LLDGEDSVTQTMTLATFGYMAP 914
H IH D+ N LL VA + DFG+++ + + +M P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFT 940
E EGI ++ D +SFG+L+ E F+
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 1343 LGTGIFSSVYKATFA----DGTNAAIKIFSLQE---DRALKSFDAECEVMRRIRHRNLAK 1395
LG G F VY+ + D + + + +L E ++ F E ++ + H+N+ +
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 1396 I--VSSCSNPGFKALILQYMPQGSLEKWLY------SHNYLLNIEQRLDIMIDVACALEY 1447
VS S P F ++++ M G L+ +L S L + L + D+AC +Y
Sbjct: 113 CIGVSLQSLPRF--ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 1448 LHQGYSTSIIHCDLKPSNVLLD---DDMVAHLGDFGIAK-LLDGVDSMKQTMTLATIGYM 1503
L + + IH D+ N LL VA +GDFG+A+ + K + + +M
Sbjct: 171 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
PE EGI ++ D +SFG+L+ E +
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 11/201 (5%)
Query: 741 RLTDGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNLQLDGAI--KSFDAECEVLRRV 797
R TD + +G G+F V + A K+ N + A + + E + R +
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLL 87
Query: 798 RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYL 857
+H N+V++ S S GF L+ + + G L + + + +Y D + LE +
Sbjct: 88 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYY----SEADASHCIHQILESV 143
Query: 858 HHGHPTPVIHCDLKPSNVLLDDD---TVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAP 914
+H H ++H DLKP N+LL L+DFG++ + GE T GY++P
Sbjct: 144 NHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA-GTPGYLSP 202
Query: 915 EYGSEGIVSTCGDVYSFGILM 935
E + D+++ G+++
Sbjct: 203 EVLRKDPYGKPVDIWACGVIL 223
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 1334 TNGFSESNLLGTGIFSSVYKATFADGTNA-AIKIFSLQE--DRALKSFDAECEVMRRIRH 1390
T+ + LG G FS V + T A KI + ++ R + + E + R ++H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQ 1450
N+ ++ S S GF L+ + G L + + + Y D + LE ++
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYY----SEADASHCIHQILESVNH 145
Query: 1451 GYSTSIIHCDLKPSNVLLDDD---MVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
+ I+H DLKP N+LL L DFG+A + G + T GY++PE
Sbjct: 146 IHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG-EQQAWFGFAGTPGYLSPEV 204
Query: 1508 GSEGIVSTSGDVYSFGILM 1526
+ D+++ G+++
Sbjct: 205 LRKDPYGKPVDIWACGVIL 223
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 23/208 (11%)
Query: 752 IGAGSFGSVYKATLPYGM-------NVAIKVFNLQLDGAIK-SFDAECEVLRRV-RHRNL 802
+GAG+FG V +AT +G+ VA+K+ K + +E +++ + +H N+
Sbjct: 54 LGAGAFGKVVEAT-AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT---------LNIQQRLDIMIDVASA 853
V ++ +C++ G +I EY G L +L L ++ L VA
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 172
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTMTLATFGYM 912
+ +L + IH D+ NVLL + VA + DFG+++ +++ + + + +M
Sbjct: 173 MAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 229
Query: 913 APEYGSEGIVSTCGDVYSFGILMIETFT 940
APE + + + DV+S+GIL+ E F+
Sbjct: 230 APESIFDCVYTVQSDVWSYGILLWEIFS 257
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 21/222 (9%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKAT-FADGTNAAIKIFSLQEDRALKSFDAECEVMR 1386
++ N LG G F V +AT F G A+ +++ ++ D + +M
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 1387 RIR-------HRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYL---------LN 1430
++ H N+ ++ +C++ G +I +Y G L +L L
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 158
Query: 1431 IEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVD 1489
+ L VA + +L S + IH D+ NVLL + VA +GDFG+A+ +++ +
Sbjct: 159 LRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 215
Query: 1490 SMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ + + +MAPE + + + DV+S+GIL+ E +
Sbjct: 216 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 28/213 (13%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV--RHRNLVKIISS- 808
+G G +G V++ L +G +VA+K+F+ + + +S+ E E+ V RH N++ I+S
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDE---QSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 809 --CSNHGFK-ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH------H 859
N + LI Y GSL +L + TL L + + A L +LH
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFL--QRQTLEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL-DGED--SVTQTMTLATFGYMAPEY 916
G P + H D K NVL+ + ++D G++ + G D + + T YMAPE
Sbjct: 130 GKPA-IAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEV 188
Query: 917 GSEGIVSTC------GDVYSFGILMIETFTRKM 943
E I + C D+++FG+++ E R +
Sbjct: 189 LDEQIRTDCFESYKWTDIWAFGLVLWEIARRTI 221
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 28/211 (13%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRI--RHRNL----AKI 1396
+G G + V++ + G + A+KIFS +++ +S+ E E+ + RH N+ A
Sbjct: 16 VGKGRYGEVWRGLW-HGESVAVKIFSSRDE---QSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 1397 VSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLH------Q 1450
++S ++ LI Y GSL +L ++ RL + AC L +LH Q
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRL--AVSAACGLAHLHVEIFGTQ 129
Query: 1451 GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL-DGVDSMK--QTMTLATIGYMAPEY 1507
G +I H D K NVL+ ++ + D G+A + G D + + T YMAPE
Sbjct: 130 G-KPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEV 188
Query: 1508 GSEGIVSTS------GDVYSFGILMMETLTR 1532
E I + D+++FG+++ E R
Sbjct: 189 LDEQIRTDCFESYKWTDIWAFGLVLWEIARR 219
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 63.9 bits (154), Expect = 7e-10, Method: Composition-based stats.
Identities = 55/246 (22%), Positives = 112/246 (45%), Gaps = 31/246 (12%)
Query: 1343 LGTGIFSSVYKATFAD------GTNAAIKIFSLQEDRALKS---FDAECEVMRRIRHRNL 1393
LG G F VY+ D T A+K ++ E +L+ F E VM+ ++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVK--TVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLL---------NIEQRLDIMIDVACA 1444
+++ S ++++ M G L+ +L S +++ + + ++A
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQT-MTLATIGYM 1503
+ YL+ + +H DL N ++ D +GDFG+ + + D ++ L + +M
Sbjct: 142 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE-------ESLPD 1556
APE +G+ +TS D++SFG+++ E + + + E LK ++ ++ P+
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 258
Query: 1557 AVTDVI 1562
VTD++
Sbjct: 259 RVTDLM 264
Score = 57.0 bits (136), Expect = 8e-08, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 22/204 (10%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVFN--LQLDGAIKSFDAECEVLRRVRHRNLV 803
+G GSFG VY+ VA+K N L I+ F E V++ ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 82
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL---------NIQQRLDIMIDVASAL 854
+++ S +++E M G L+ +L S + +Q+ + + ++A +
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFGYMA 913
YL+ +H DL N ++ D + DFG+++ + D + L +MA
Sbjct: 143 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 914 PEYGSEGIVSTCGDVYSFGILMIE 937
PE +G+ +T D++SFG+++ E
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWE 223
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human
Insulin Receptor
Length = 306
Score = 63.9 bits (154), Expect = 7e-10, Method: Composition-based stats.
Identities = 55/246 (22%), Positives = 112/246 (45%), Gaps = 31/246 (12%)
Query: 1343 LGTGIFSSVYKATFAD------GTNAAIKIFSLQEDRALKS---FDAECEVMRRIRHRNL 1393
LG G F VY+ D T A+K ++ E +L+ F E VM+ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVK--TVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLL---------NIEQRLDIMIDVACA 1444
+++ S ++++ M G L+ +L S +++ + + ++A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQT-MTLATIGYM 1503
+ YL+ + +H DL N ++ D +GDFG+ + + D ++ L + +M
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE-------ESLPD 1556
APE +G+ +TS D++SFG+++ E + + + E LK ++ ++ P+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 1557 AVTDVI 1562
VTD++
Sbjct: 260 RVTDLM 265
Score = 57.0 bits (136), Expect = 8e-08, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 22/204 (10%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVFN--LQLDGAIKSFDAECEVLRRVRHRNLV 803
+G GSFG VY+ VA+K N L I+ F E V++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 83
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL---------NIQQRLDIMIDVASAL 854
+++ S +++E M G L+ +L S + +Q+ + + ++A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFGYMA 913
YL+ +H DL N ++ D + DFG+++ + D + L +MA
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 914 PEYGSEGIVSTCGDVYSFGILMIE 937
PE +G+ +T D++SFG+++ E
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 23/221 (10%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIKVFN-LQLDGA-IKSFDAECEVLRRVRHRNLVKIISS 808
IG G+F V A + G VA+++ + QL+ + ++ E +++ + H N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 809 CSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHC 868
L++EY G + +L +H + R + SA++Y H ++H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 869 DLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF----GYMAPE-YGSEGIVS 923
DLK N+LLD D ++DFG S + T L TF Y APE + +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 924 TCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLR 964
DV+S G+++ + +P F G+ +LK+ E LR
Sbjct: 192 PEVDVWSLGVILYTLVSGSLP----FDGQ-NLKELRERVLR 227
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 10/199 (5%)
Query: 1343 LGTGIFSSVYKAT-FADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G G F+ V A G A++I + +L+ E +M+ + H N+ K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
L+++Y G + +L +H + E R + A++Y HQ + I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE-YGSEGIVSTSGD 1518
DLK N+LLD DM + DFG + + K + Y APE + + D
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 195
Query: 1519 VYSFGILMMETLTRRKPTD 1537
V+S G+++ ++ P D
Sbjct: 196 VWSLGVILYTLVSGSLPFD 214
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.5 bits (153), Expect = 9e-10, Method: Composition-based stats.
Identities = 60/233 (25%), Positives = 105/233 (45%), Gaps = 31/233 (13%)
Query: 736 YQELQRLTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVF-NLQLDGAIKSFDA-ECE 792
+Q +++ + L+G GS+G V K G VAIK F D +K E +
Sbjct: 21 FQSMEK----YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIK 76
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKW-LYSHKYTLNIQQRLDIMIDVA 851
+L+++RH NLV ++ C L+ E++ L+ L+ + + Q+ + +
Sbjct: 77 LLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKY--LFQII 134
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
+ + + H + +IH D+KP N+L+ V L DFG ++ L V +AT Y
Sbjct: 135 NGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD-EVATRWY 190
Query: 912 MAPE-------YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
APE YG DV++ G L+ E F + +F G++ + +
Sbjct: 191 RAPELLVGDVKYGK------AVDVWAIGCLVTEMFM----GEPLFPGDSDIDQ 233
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 33/213 (15%)
Query: 1342 LLGTGIFSSVYKATFAD-GTNAAIKIF-SLQEDRALKSFDA-ECEVMRRIRHRNLAKIVS 1398
L+G G + V K D G AIK F +D+ +K E ++++++RH NL ++
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 1399 SCSNPGFKALILQYMPQGSLEKW-LYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSII 1457
C L+ +++ L+ L+ + + Q+ + + + + H S +II
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKY--LFQIINGIGFCH---SHNII 146
Query: 1458 HCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE-------YGSE 1510
H D+KP N+L+ V L DFG A+ L + +AT Y APE YG
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD-EVATRWYRAPELLVGDVKYGK- 204
Query: 1511 GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGE 1543
+ DV++ G L+ E MF GE
Sbjct: 205 -----AVDVWAIGCLVTE----------MFMGE 222
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 63.5 bits (153), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 11/163 (6%)
Query: 778 LQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS--NHGFKALILEYMPQGSLEKWLYSHK 835
+Q G I+ E +L+++ H N+VK++ N ++ E + QG + + + + K
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VPTLK 132
Query: 836 YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLD 895
Q R D+ +EYLH+ +IH D+KPSN+L+ +D ++DFG+S
Sbjct: 133 PLSEDQARF-YFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 896 GEDSVTQTMTLATFGYMAPEYGSEGIVSTCG---DVYSFGILM 935
G D++ T+ T +MAPE SE G DV++ G+ +
Sbjct: 189 GSDALLSN-TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKAL--ILQYMPQGSLEKWLYSHNYLLNIEQRLDIM 1438
E +++++ H N+ K+V +P L + + + QG + + L+ +Q
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP--LSEDQARFYF 143
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA 1498
D+ +EYLH IIH D+KPSN+L+ +D + DFG++ G D++ + T+
Sbjct: 144 QDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL-LSNTVG 199
Query: 1499 TIGYMAPEYGSEGIVSTSG---DVYSFGILM 1526
T +MAPE SE SG DV++ G+ +
Sbjct: 200 TPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 63.5 bits (153), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 32/215 (14%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQ---------EDRALKSFDAECEVMRRIRHR- 1391
LG G F V +A F A + +++ E RAL S E +++ I H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS---ELKILIHIGHHL 93
Query: 1392 NLAKIVSSCSNPGFKAL-ILQYMPQGSLEKWLYS-------------HNYLLNIEQRLDI 1437
N+ ++ +C+ PG + I+++ G+L +L S + L +E +
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 1438 MIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDSMKQTMT 1496
VA +E+L S IH DL N+LL + V + DFG+A+ + D +++
Sbjct: 154 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 1497 LATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+L+ E +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 34/216 (15%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAI----KSFDAECEVLRRVRHR 800
+G G+FG V +A +G++ VA+K+ +GA ++ +E ++L + H
Sbjct: 37 LGRGAFGQVIEADA-FGIDKTATXRTVAVKMLK---EGATHSEHRALMSELKILIHIGHH 92
Query: 801 -NLVKIISSCSNHGFKAL-ILEYMPQGSLEKWLYS-------------HKYTLNIQQRLD 845
N+V ++ +C+ G + I+E+ G+L +L S +K L ++ +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 846 IMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTM 904
VA +E+L IH DL N+LL + V + DFG+++ + D V +
Sbjct: 153 YSFQVAKGMEFLAS---RKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 905 TLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+MAPE + + + DV+SFG+L+ E F+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 23/221 (10%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIKVFN-LQLD-GAIKSFDAECEVLRRVRHRNLVKIISS 808
IG G+F V A + G VAIK+ + QL+ +++ E +++ + H N+VK+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 809 CSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHC 868
LI+EY G + +L +H + R + SA++Y H ++H
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQKR---IVHR 138
Query: 869 DLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF----GYMAPE-YGSEGIVS 923
DLK N+LLD D ++DFG S + T L F Y APE + +
Sbjct: 139 DLKAENLLLDADMNIKIADFGFS------NEFTVGGKLDAFCGAPPYAAPELFQGKKYDG 192
Query: 924 TCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLR 964
DV+S G+++ + +P F G+ +LK+ E LR
Sbjct: 193 PEVDVWSLGVILYTLVSGSLP----FDGQ-NLKELRERVLR 228
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 10/199 (5%)
Query: 1343 LGTGIFSSVYKAT-FADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G G F+ V A G AIKI + +L+ E +M+ + H N+ K+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
LI++Y G + +L +H + E R + A++Y HQ I+H
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQ---KRIVHR 138
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE-YGSEGIVSTSGD 1518
DLK N+LLD DM + DFG + + K Y APE + + D
Sbjct: 139 DLKAENLLLDADMNIKIADFGFSN--EFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVD 196
Query: 1519 VYSFGILMMETLTRRKPTD 1537
V+S G+++ ++ P D
Sbjct: 197 VWSLGVILYTLVSGSLPFD 215
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 107/233 (45%), Gaps = 37/233 (15%)
Query: 732 RRISYQELQRLTDGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFDA- 789
+RI Y ++ F +L+G G++G V AT P G VAIK I+ FD
Sbjct: 3 KRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK--------KIEPFDKP 50
Query: 790 --------ECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQ 841
E ++L+ +H N++ I + F+ Y+ Q ++ L+ ++ Q
Sbjct: 51 LFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHR---VISTQ 107
Query: 842 QRLDIMID--VASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLD---- 895
D I + L + H + VIH DLKPSN+L++ + + DFG+++++D
Sbjct: 108 MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 896 --GEDSVTQ---TMTLATFGYMAPEYG-SEGIVSTCGDVYSFGILMIETFTRK 942
E + Q T +AT Y APE + S DV+S G ++ E F R+
Sbjct: 168 DNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 39/234 (16%)
Query: 1323 RRISYQELRLATNGFSESNLLGTGIFSSVYKATFAD-GTNAAIK--------IFSLQEDR 1373
+RI Y ++ F +LLG G + V AT G AIK +F+L+ R
Sbjct: 3 KRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR 58
Query: 1374 ALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFK----ALILQYMPQGSLEKWLYSHNYLL 1429
+K +++ +H N+ I + F+ I+Q + Q L + + + +L
Sbjct: 59 EIK-------ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ--ML 109
Query: 1430 NIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLD--G 1487
+ + + A++ LH +++IH DLKPSN+L++ + + DFG+A+++D
Sbjct: 110 SDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 1488 VDSMKQT-----MT--LATIGYMAPEYG-SEGIVSTSGDVYSFGILMMETLTRR 1533
D+ + T MT +AT Y APE + S + DV+S G ++ E RR
Sbjct: 167 ADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 30/213 (14%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQ---------EDRALKSFDAECEVMRRIRHR- 1391
LG G F V +A F A + +++ E RAL S E +++ I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS---ELKILIHIGHHL 91
Query: 1392 NLAKIVSSCSNPGFKAL-ILQYMPQGSLEKWLYS-----------HNYLLNIEQRLDIMI 1439
N+ ++ +C+ PG + I+++ G+L +L S + L +E +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF 151
Query: 1440 DVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDSMKQTMTLA 1498
VA +E+L S IH DL N+LL + V + DFG+A+ + D +++
Sbjct: 152 QVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 1499 TIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+L+ E +
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 32/214 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAI----KSFDAECEVLRRVRHR 800
+G G+FG V +A +G++ VA+K+ +GA ++ +E ++L + H
Sbjct: 35 LGRGAFGQVIEADA-FGIDKTATXRTVAVKMLK---EGATHSEHRALMSELKILIHIGHH 90
Query: 801 -NLVKIISSCSNHGFKAL-ILEYMPQGSLEKWLYS-----------HKYTLNIQQRLDIM 847
N+V ++ +C+ G + I+E+ G+L +L S +K L ++ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 848 IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTMTL 906
VA +E+L IH DL N+LL + V + DFG+++ + D V +
Sbjct: 151 FQVAKGMEFLAS---RKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 207
Query: 907 ATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+MAPE + + + DV+SFG+L+ E F+
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 29/198 (14%)
Query: 750 NLIGAGSFGSVY--KATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKI-- 805
++G+G+F V+ K L G A+K S + E VL++++H N+V +
Sbjct: 15 EVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 806 ISSCSNHGFKALILEYMPQGSL-----EKWLYSHK-YTLNIQQRLDIMIDVASALEYLHH 859
I + H + L+++ + G L E+ +Y+ K +L IQQ V SA++YLH
Sbjct: 74 IYESTTHYY--LVMQLVSGGELFDRILERGVYTEKDASLVIQQ-------VLSAVKYLHE 124
Query: 860 GHPTPVIHCDLKPSNVLL---DDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
++H DLKP N+L ++++ ++DFG+SK+ E + + T GY+APE
Sbjct: 125 N---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEV 178
Query: 917 GSEGIVSTCGDVYSFGIL 934
++ S D +S G++
Sbjct: 179 LAQKPYSKAVDCWSIGVI 196
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 94/194 (48%), Gaps = 21/194 (10%)
Query: 1341 NLLGTGIFSSVYKATFADGTNAAIKIFSLQ---EDRALK--SFDAECEVMRRIRHRNLAK 1395
+LG+G FS V F K+F+L+ + A + S + E V+++I+H N+
Sbjct: 15 EVLGSGAFSEV----FLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVT 70
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ + L++Q + G L + + L ++ V A++YLH+
Sbjct: 71 LEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-VIQQVLSAVKYLHEN---G 126
Query: 1456 IIHCDLKPSNVLL---DDDMVAHLGDFGIAKL-LDGVDSMKQTMTLATIGYMAPEYGSEG 1511
I+H DLKP N+L +++ + DFG++K+ +G+ + T GY+APE ++
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI----MSTACGTPGYVAPEVLAQK 182
Query: 1512 IVSTSGDVYSFGIL 1525
S + D +S G++
Sbjct: 183 PYSKAVDCWSIGVI 196
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ L+ ++ + T + + + + L + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 180
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 181 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 215
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLE-KWLYSHNYLLNIEQRLDIMIDVACALEYLHQG- 1451
K++ L+ +++ S++ K + L I L + L L QG
Sbjct: 68 VKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPL-----IKSYLFQLLQGL 119
Query: 1452 ---YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE-- 1506
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEIL 178
Query: 1507 YGSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 179 LGCK-YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 116/274 (42%), Gaps = 38/274 (13%)
Query: 1330 LRLATNGFSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRI 1388
+ L N FS ++G G F VY AD G A+K + + +K E +
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL---DKKRIKMKQGETLALN-- 237
Query: 1389 RHRNLAKIVSS-------CSNPGFK-----ALILQYMPQGSLEKWLYSHNYLLNIEQRLD 1436
R + +VS+ C + F + IL M G L L H + R
Sbjct: 238 -ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF- 295
Query: 1437 IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT 1496
++ LE++H + +++ DLKP+N+LLD+ + D G+A K +
Sbjct: 296 YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC---DFSKKKPHAS 349
Query: 1497 LATIGYMAPEYGSEGIV-STSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE--- 1552
+ T GYMAPE +G+ +S D +S G ++ + L P T + KH ++
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---KHEIDRMTL 406
Query: 1553 ----SLPDAVTDVIDANLLSGEEEADIAAKKKCM 1582
LPD+ + + +LL G + D+ + C+
Sbjct: 407 TMAVELPDSFSPEL-RSLLEGLLQRDVNRRLGCL 439
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 720 ILENDSLS-LATWRRISYQELQRLTDGFSESNLIGAGSFGSVY---KATLPYGMNVAIKV 775
+E+D + W+ + + + FS +IG G FG VY KA G A+K
Sbjct: 164 FIESDKFTRFCQWKNVELN-IHLTMNDFSVHRIIGRGGFGEVYGCRKADT--GKMYAMKC 220
Query: 776 FNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS-------CSNHGFK-----ALILEYMP 823
+ + IK E L R ++ ++S+ C ++ F + IL+ M
Sbjct: 221 LDKK---RIKMKQGETLALN---ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 274
Query: 824 QGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA 883
G L L H + D+ A + L H H V++ DLKP+N+LLD+
Sbjct: 275 GGDLHYHLSQH----GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHV 330
Query: 884 HLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIV-STCGDVYSFGILMIE 937
+SD G++ + ++ T GYMAPE +G+ + D +S G ++ +
Sbjct: 331 RISDLGLACDFSKKKP---HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 382
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNL--QLDGAIKSFDAECEVLRRVRHR 800
+ F + IG G++G VYKA G VA+K L + +G + E +L+ + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT-LNIQQRLDIMIDVASALEYLHH 859
N+VK++ L+ E++ L+ ++ + T + + + + L + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YG 917
V+H DLKP N+L++ + L+DFG+++ G T + T Y APE G
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLG 179
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
+ ST D++S G + E TR+ +F G++ + +
Sbjct: 180 CK-YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQ 214
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 1337 FSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQ-EDRALKSFD-AECEVMRRIRHRNL 1393
F + +G G + VYKA G A+K L E + S E +++ + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLE-KWLYSHNYLLNIEQRLDIMIDVACALEYLHQG- 1451
K++ L+ +++ S++ K + L I L + L L QG
Sbjct: 67 VKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPL-----IKSYLFQLLQGL 118
Query: 1452 ---YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE-- 1506
+S ++H DLKP N+L++ + L DFG+A+ GV + T+ Y APE
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEIL 177
Query: 1507 YGSEGIVSTSGDVYSFGILMMETLTRR 1533
G + ST+ D++S G + E +TRR
Sbjct: 178 LGCK-YYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 116/274 (42%), Gaps = 38/274 (13%)
Query: 1330 LRLATNGFSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRI 1388
+ L N FS ++G G F VY AD G A+K + + +K E +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL---DKKRIKMKQGETLALN-- 238
Query: 1389 RHRNLAKIVSS-------CSNPGFK-----ALILQYMPQGSLEKWLYSHNYLLNIEQRLD 1436
R + +VS+ C + F + IL M G L L H + R
Sbjct: 239 -ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF- 296
Query: 1437 IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT 1496
++ LE++H + +++ DLKP+N+LLD+ + D G+A K +
Sbjct: 297 YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC---DFSKKKPHAS 350
Query: 1497 LATIGYMAPEYGSEGIV-STSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE--- 1552
+ T GYMAPE +G+ +S D +S G ++ + L P T + KH ++
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---KHEIDRMTL 407
Query: 1553 ----SLPDAVTDVIDANLLSGEEEADIAAKKKCM 1582
LPD+ + + +LL G + D+ + C+
Sbjct: 408 TMAVELPDSFSPEL-RSLLEGLLQRDVNRRLGCL 440
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 720 ILENDSLS-LATWRRISYQELQRLTDGFSESNLIGAGSFGSVY---KATLPYGMNVAIKV 775
+E+D + W+ + + + FS +IG G FG VY KA G A+K
Sbjct: 165 FIESDKFTRFCQWKNVELN-IHLTMNDFSVHRIIGRGGFGEVYGCRKADT--GKMYAMKC 221
Query: 776 FNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS-------CSNHGFK-----ALILEYMP 823
+ + IK E L R ++ ++S+ C ++ F + IL+ M
Sbjct: 222 LDKK---RIKMKQGETLALN---ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 275
Query: 824 QGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA 883
G L L H + D+ A + L H H V++ DLKP+N+LLD+
Sbjct: 276 GGDLHYHLSQH----GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHV 331
Query: 884 HLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIV-STCGDVYSFGILMIE 937
+SD G++ + ++ T GYMAPE +G+ + D +S G ++ +
Sbjct: 332 RISDLGLACDFSKKKP---HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 107/233 (45%), Gaps = 37/233 (15%)
Query: 732 RRISYQELQRLTDGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFDA- 789
+RI Y ++ F +L+G G++G V AT P G VAIK I+ FD
Sbjct: 3 KRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK--------KIEPFDKP 50
Query: 790 --------ECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQ 841
E ++L+ +H N++ I + F+ Y+ Q ++ L+ ++ Q
Sbjct: 51 LFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHR---VISTQ 107
Query: 842 QRLDIMID--VASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLD---- 895
D I + L + H + VIH DLKPSN+L++ + + DFG+++++D
Sbjct: 108 MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 896 --GEDSVTQ---TMTLATFGYMAPEYG-SEGIVSTCGDVYSFGILMIETFTRK 942
E + Q T +AT Y APE + S DV+S G ++ E F R+
Sbjct: 168 DNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 39/234 (16%)
Query: 1323 RRISYQELRLATNGFSESNLLGTGIFSSVYKATFAD-GTNAAIK--------IFSLQEDR 1373
+RI Y ++ F +LLG G + V AT G AIK +F+L+ R
Sbjct: 3 KRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR 58
Query: 1374 ALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFK----ALILQYMPQGSLEKWLYSHNYLL 1429
+K +++ +H N+ I + F+ I+Q + Q L + + + +L
Sbjct: 59 EIK-------ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ--ML 109
Query: 1430 NIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLD--G 1487
+ + + A++ LH +++IH DLKPSN+L++ + + DFG+A+++D
Sbjct: 110 SDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 1488 VDSMKQT-----MT--LATIGYMAPEYG-SEGIVSTSGDVYSFGILMMETLTRR 1533
D+ + T MT +AT Y APE + S + DV+S G ++ E RR
Sbjct: 167 ADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 29/213 (13%)
Query: 755 GSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEV--LRRVRHRNLVKIISSCSNH 812
G FG V+KA L VA+K+F +Q +S+ E EV L ++H N+++ I +
Sbjct: 35 GRFGCVWKAQL-LNEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGA-EKR 89
Query: 813 GFKA-----LILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH-------G 860
G LI + +GSL +L ++ + N + I +A L YLH G
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFLKANVVSWN--ELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 861 HPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM-TLATFGYMAPEYGSE 919
H + H D+K NVLL ++ A ++DFG++ + S T + T YMAPE E
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV-LE 206
Query: 920 GIVSTCG------DVYSFGILMIETFTRKMPTD 946
G ++ D+Y+ G+++ E +R D
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 25/211 (11%)
Query: 1346 GIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGF 1405
G F V+KA + A+KIF +Q+ ++ ++ + E + ++H N+ + + + G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGA-EKRGT 91
Query: 1406 KA-----LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQ-------GYS 1453
LI + +GSL +L ++ +++ + I +A L YLH+ G+
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHK 149
Query: 1454 TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM-TLATIGYMAPEYGSEGI 1512
+I H D+K NVLL +++ A + DFG+A + S T + T YMAPE EG
Sbjct: 150 PAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV-LEGA 208
Query: 1513 VSTSG------DVYSFGILMMETLTRRKPTD 1537
++ D+Y+ G+++ E +R D
Sbjct: 209 INFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G+FG VYKA + A KV + + + ++ + E ++L H N+VK++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 811 NHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+++E+ G+++ + + L Q I + L+ L++ H +IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQ---IQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 871 KPSNVLLDDDTVAHLSDFGIS----KLLDGEDSVTQTMTLATFGYMAPEY-----GSEGI 921
K N+L D L+DFG+S + + D + T +MAPE +
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXF-----IGTPYWMAPEVVMCETSKDRP 216
Query: 922 VSTCGDVYSFGILMIETFTRKMPTDEM 948
DV+S GI +IE + P E+
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHEL 243
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 1343 LGTGIFSSVYKATFADGTN-AAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
LG G F VYKA + + AA K+ + + L+ + E +++ H N+ K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 1402 NPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRL-DIMIDVAC-----ALEYLHQGYSTS 1455
+++++ G+++ +L +E+ L + I V C AL YLH
Sbjct: 105 YENNLWILIEFCAGGAVDA------VMLELERPLTESQIQVVCKQTLDALNYLH---DNK 155
Query: 1456 IIHCDLKPSNVLLDDDMVAHLGDFGI-AKLLDGVDSMKQTMTLATIGYMAPEY-----GS 1509
IIH DLK N+L D L DFG+ AK + ++ + T +MAPE
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI--QRRDXFIGTPYWMAPEVVMCETSK 213
Query: 1510 EGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK 1547
+ DV+S GI ++E P ++ V LK
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLK 251
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 1343 LGTGIFSSVY-KATFADGTNAAIKIFSLQEDRALKSFDA---ECEVMRRIRHRNLAKIVS 1398
LGTG F V+ + +G A+K+ + LK + E ++ + H + ++
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIH 1458
+ + +I+ Y+ G L L N + +V ALEYLH S II+
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLH---SKDIIY 129
Query: 1459 CDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTL-ATIGYMAPEYGSEGIVSTSG 1517
DLKP N+LLD + + DFG AK + V T L T Y+APE S + S
Sbjct: 130 RDLKPENILLDKNGHIKITDFGFAKYVPDV-----TYXLCGTPDYIAPEVVSTKPYNKSI 184
Query: 1518 DVYSFGILMMETLTRRKPTDD 1538
D +SFGIL+ E L P D
Sbjct: 185 DWWSFGILIYEMLAGYTPFYD 205
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 752 IGAGSFGSVYKATLPY-GMNVAIKVFNLQLDGAIKSFDA---ECEVLRRVRHRNLVKIIS 807
+G GSFG V+ + G A+KV ++ +K + E +L V H ++++
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 808 SCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
+ + +I++Y+ G L L + N + +V ALEYLH +I+
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLHSKD---IIY 129
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGD 927
DLKP N+LLD + ++DFG +K + VT + T Y+APE S + D
Sbjct: 130 RDLKPENILLDKNGHIKITDFGFAKYV---PDVTYXLC-GTPDYIAPEVVSTKPYNKSID 185
Query: 928 VYSFGILMIETFTRKMP 944
+SFGIL+ E P
Sbjct: 186 WWSFGILIYEMLAGYTP 202
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 1333 ATNGFSESNLLGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALKSFD-AECEVMRRIRH 1390
+++ F + LG G +++VYK G A+K L + S E +M+ ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQ 1450
N+ ++ L+ ++M L+K++ S + N + L++ + V L Q
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRT-VGNTPRGLELNL-VKYFQWQLLQ 119
Query: 1451 G----YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE 1506
G + I+H DLKP N+L++ LGDFG+A+ G+ + + T+ Y AP+
Sbjct: 120 GLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF-GIPVNTFSSEVVTLWYRAPD 178
Query: 1507 --YGSEGIVSTSGDVYSFGILMMETLT 1531
GS STS D++S G ++ E +T
Sbjct: 179 VLMGSR-TYSTSIDIWSCGCILAEMIT 204
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQ-LDGAIKSFDAECEVLRRVRHRNLV 803
F + +G G++ +VYK G+ VA+K L +G + E +++ ++H N+V
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIV 66
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKY-------TLNIQQRLDIMIDVASALEY 856
++ L+ E+M L+K++ S LN+ + + L+
Sbjct: 67 RLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL-----LQG 120
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE- 915
L H ++H DLKP N+L++ L DFG+++ G T + + T Y AP+
Sbjct: 121 LAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF-GIPVNTFSSEVVTLWYRAPDV 179
Query: 916 -YGSEGIVSTCGDVYSFGILMIETFTRK 942
GS ST D++S G ++ E T K
Sbjct: 180 LMGSR-TYSTSIDIWSCGCILAEMITGK 206
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 752 IGAGSFGSVYKAT--LPYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVR---HRNLVK 804
IG G++G V+KA G VA+K +Q +G S E VLR + H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 805 IISSCS-----NHGFKALILEYMPQG---SLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
+ C+ L+ E++ Q L+K T I+ D+M + L++
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK---DMMFQLLRGLDF 135
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
LH V+H DLKP N+L+ L+DFG++++ + ++T + T Y APE
Sbjct: 136 LHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEV 190
Query: 917 GSEGIVSTCGDVYSFGILMIETFTRK 942
+ +T D++S G + E F RK
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRK 216
Score = 60.8 bits (146), Expect = 6e-09, Method: Composition-based stats.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 36/192 (18%)
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM 1495
D+M + L++LH S ++H DLKP N+L+ L DFG+A++ M T
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QMALTS 178
Query: 1496 TLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLP 1555
+ T+ Y APE + +T D++S G + E + RRKP +F G S
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE-MFRRKP---LFRG---------SSDV 225
Query: 1556 DAVTDVIDANLLSGEEE--ADIAAKKKCMSSVMS----------------LALKCSEEIP 1597
D + ++D L GEE+ D+A ++ S + L LKC P
Sbjct: 226 DQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNP 285
Query: 1598 EERMNVKDALAN 1609
+R++ AL++
Sbjct: 286 AKRISAYSALSH 297
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 752 IGAGSFGSVYKAT--LPYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVR---HRNLVK 804
IG G++G V+KA G VA+K +Q +G S E VLR + H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 805 IISSCS-----NHGFKALILEYMPQG---SLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
+ C+ L+ E++ Q L+K T I+ D+M + L++
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK---DMMFQLLRGLDF 135
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
LH V+H DLKP N+L+ L+DFG++++ + ++T + T Y APE
Sbjct: 136 LHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEV 190
Query: 917 GSEGIVSTCGDVYSFGILMIETFTRK 942
+ +T D++S G + E F RK
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRK 216
Score = 60.8 bits (146), Expect = 6e-09, Method: Composition-based stats.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 36/192 (18%)
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM 1495
D+M + L++LH S ++H DLKP N+L+ L DFG+A++ M T
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QMALTS 178
Query: 1496 TLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLP 1555
+ T+ Y APE + +T D++S G + E + RRKP +F G S
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE-MFRRKP---LFRG---------SSDV 225
Query: 1556 DAVTDVIDANLLSGEEE--ADIAAKKKCMSSVMS----------------LALKCSEEIP 1597
D + ++D L GEE+ D+A ++ S + L LKC P
Sbjct: 226 DQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNP 285
Query: 1598 EERMNVKDALAN 1609
+R++ AL++
Sbjct: 286 AKRISAYSALSH 297
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 752 IGAGSFGSVYKAT--LPYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVR---HRNLVK 804
IG G++G V+KA G VA+K +Q +G S E VLR + H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 805 IISSCS-----NHGFKALILEYMPQG---SLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
+ C+ L+ E++ Q L+K T I+ D+M + L++
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK---DMMFQLLRGLDF 135
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
LH V+H DLKP N+L+ L+DFG++++ + ++T + T Y APE
Sbjct: 136 LHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEV 190
Query: 917 GSEGIVSTCGDVYSFGILMIETFTRK 942
+ +T D++S G + E F RK
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRK 216
Score = 60.8 bits (146), Expect = 6e-09, Method: Composition-based stats.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 36/192 (18%)
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM 1495
D+M + L++LH S ++H DLKP N+L+ L DFG+A++ M T
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QMALTS 178
Query: 1496 TLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLP 1555
+ T+ Y APE + +T D++S G + E + RRKP +F G S
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE-MFRRKP---LFRG---------SSDV 225
Query: 1556 DAVTDVIDANLLSGEEE--ADIAAKKKCMSSVMS----------------LALKCSEEIP 1597
D + ++D L GEE+ D+A ++ S + L LKC P
Sbjct: 226 DQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNP 285
Query: 1598 EERMNVKDALAN 1609
+R++ AL++
Sbjct: 286 AKRISAYSALSH 297
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 55/246 (22%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 1343 LGTGIFSSVYKATFAD------GTNAAIKIFSLQEDRALKS---FDAECEVMRRIRHRNL 1393
LG G F VY+ D T A+K ++ E +L+ F E VM+ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVK--TVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLL---------NIEQRLDIMIDVACA 1444
+++ S ++++ M G L+ +L S +++ + + ++A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDSMKQTMTLATIGYM 1503
+ YL+ + +H DL N ++ D +GDFG+ + + + K L + +M
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE-------ESLPD 1556
APE +G+ +TS D++SFG+++ E + + + E LK ++ ++ P+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 1557 AVTDVI 1562
VTD++
Sbjct: 260 RVTDLM 265
Score = 55.1 bits (131), Expect = 4e-07, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVFN--LQLDGAIKSFDAECEVLRRVRHRNLV 803
+G GSFG VY+ VA+K N L I+ F E V++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 83
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL---------NIQQRLDIMIDVASAL 854
+++ S +++E M G L+ +L S + +Q+ + + ++A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQTMTLATFGYMA 913
YL+ +H DL N ++ D + DFG+++ + + L +MA
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 914 PEYGSEGIVSTCGDVYSFGILMIE 937
PE +G+ +T D++SFG+++ E
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And
Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In
Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 116/274 (42%), Gaps = 38/274 (13%)
Query: 1330 LRLATNGFSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRI 1388
+ L N FS ++G G F VY AD G A+K + + +K E +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL---DKKRIKMKQGETLALN-- 238
Query: 1389 RHRNLAKIVSS-------CSNPGFK-----ALILQYMPQGSLEKWLYSHNYLLNIEQRLD 1436
R + +VS+ C + F + IL M G L L H + R
Sbjct: 239 -ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF- 296
Query: 1437 IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT 1496
++ LE++H + +++ DLKP+N+LLD+ + D G+A K +
Sbjct: 297 YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC---DFSKKKPHAS 350
Query: 1497 LATIGYMAPEYGSEGIV-STSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE--- 1552
+ T GYMAPE +G+ +S D +S G ++ + L P T + KH ++
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---KHEIDRMTL 407
Query: 1553 ----SLPDAVTDVIDANLLSGEEEADIAAKKKCM 1582
LPD+ + + +LL G + D+ + C+
Sbjct: 408 TMAVELPDSFSPEL-RSLLEGLLQRDVNRRLGCL 440
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 720 ILENDSLS-LATWRRISYQELQRLTDGFSESNLIGAGSFGSVY---KATLPYGMNVAIKV 775
+E+D + W+ + + + FS +IG G FG VY KA G A+K
Sbjct: 165 FIESDKFTRFCQWKNVELN-IHLTMNDFSVHRIIGRGGFGEVYGCRKADT--GKMYAMKC 221
Query: 776 FNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS-------CSNHGFK-----ALILEYMP 823
+ + IK E L R ++ ++S+ C ++ F + IL+ M
Sbjct: 222 LDKK---RIKMKQGETLALN---ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 275
Query: 824 QGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA 883
G L L H + D+ A + L H H V++ DLKP+N+LLD+
Sbjct: 276 GGDLHYHLSQH----GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHV 331
Query: 884 HLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIV-STCGDVYSFGILMIE 937
+SD G++ + ++ T GYMAPE +G+ + D +S G ++ +
Sbjct: 332 RISDLGLACDFSKKKP---HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 116/274 (42%), Gaps = 38/274 (13%)
Query: 1330 LRLATNGFSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRI 1388
+ L N FS ++G G F VY AD G A+K + + +K E +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL---DKKRIKMKQGETLALN-- 238
Query: 1389 RHRNLAKIVSS-------CSNPGFK-----ALILQYMPQGSLEKWLYSHNYLLNIEQRLD 1436
R + +VS+ C + F + IL M G L L H + R
Sbjct: 239 -ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF- 296
Query: 1437 IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT 1496
++ LE++H + +++ DLKP+N+LLD+ + D G+A K +
Sbjct: 297 YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC---DFSKKKPHAS 350
Query: 1497 LATIGYMAPEYGSEGIV-STSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE--- 1552
+ T GYMAPE +G+ +S D +S G ++ + L P T + KH ++
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---KHEIDRMTL 407
Query: 1553 ----SLPDAVTDVIDANLLSGEEEADIAAKKKCM 1582
LPD+ + + +LL G + D+ + C+
Sbjct: 408 TMAVELPDSFSPEL-RSLLEGLLQRDVNRRLGCL 440
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 720 ILENDSLS-LATWRRISYQELQRLTDGFSESNLIGAGSFGSVY---KATLPYGMNVAIKV 775
+E+D + W+ + + + FS +IG G FG VY KA G A+K
Sbjct: 165 FIESDKFTRFCQWKNVELN-IHLTMNDFSVHRIIGRGGFGEVYGCRKADT--GKMYAMKC 221
Query: 776 FNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS-------CSNHGFK-----ALILEYMP 823
+ + IK E L R ++ ++S+ C ++ F + IL+ M
Sbjct: 222 LDKK---RIKMKQGETLALN---ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 275
Query: 824 QGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA 883
G L L H + D+ A + L H H V++ DLKP+N+LLD+
Sbjct: 276 GGDLHYHLSQH----GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHV 331
Query: 884 HLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIV-STCGDVYSFGILMIE 937
+SD G++ + ++ T GYMAPE +G+ + D +S G ++ +
Sbjct: 332 RISDLGLACDFSKKKP---HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
Length = 327
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 10/199 (5%)
Query: 1343 LGTGIFSSVYKAT-FADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G G F+ V A G A++I + +L+ E +M+ + H N+ K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
L+++Y G + +L +H + E R + A++Y HQ + I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE-YGSEGIVSTSGD 1518
DLK N+LLD DM + DFG + + + + + Y APE + + D
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLDE--FCGSPPYAAPELFQGKKYDGPEVD 195
Query: 1519 VYSFGILMMETLTRRKPTD 1537
V+S G+++ ++ P D
Sbjct: 196 VWSLGVILYTLVSGSLPFD 214
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 23/221 (10%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIKVFN-LQLDGA-IKSFDAECEVLRRVRHRNLVKIISS 808
IG G+F V A + G VA+++ + QL+ + ++ E +++ + H N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 809 CSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHC 868
L++EY G + +L +H + R + SA++Y H ++H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 869 DLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF----GYMAPE-YGSEGIVS 923
DLK N+LLD D ++DFG S + T L F Y APE + +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDEFCGSPPYAAPELFQGKKYDG 191
Query: 924 TCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLR 964
DV+S G+++ + +P F G+ +LK+ E LR
Sbjct: 192 PEVDVWSLGVILYTLVSGSLP----FDGQ-NLKELRERVLR 227
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 23/221 (10%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIKVFN-LQLDGA-IKSFDAECEVLRRVRHRNLVKIISS 808
IG G+F V A + G VA+K+ + QL+ + ++ E +++ + H N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 809 CSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHC 868
L++EY G + +L +H + R + SA++Y H ++H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 869 DLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF----GYMAPE-YGSEGIVS 923
DLK N+LLD D ++DFG S + T L F Y APE + +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 924 TCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLR 964
DV+S G+++ + +P F G+ +LK+ E LR
Sbjct: 192 PEVDVWSLGVILYTLVSGSLP----FDGQ-NLKELRERVLR 227
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 10/199 (5%)
Query: 1343 LGTGIFSSVYKAT-FADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G G F+ V A G A+KI + +L+ E +M+ + H N+ K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
L+++Y G + +L +H + E R + A++Y HQ + I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE-YGSEGIVSTSGD 1518
DLK N+LLD DM + DFG + + K Y APE + + D
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVD 195
Query: 1519 VYSFGILMMETLTRRKPTD 1537
V+S G+++ ++ P D
Sbjct: 196 VWSLGVILYTLVSGSLPFD 214
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 21/236 (8%)
Query: 1318 NTAALRRISYQELRLATNGFSESNLLGTGIFSSVYKATF-ADGTNAAI--KIFSLQED-- 1372
N A LR + ELR + +LG+G F +VYK + DG N I I L+E+
Sbjct: 7 NQALLRILKETELR-------KVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS 59
Query: 1373 -RALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNI 1431
+A K E VM + +++++ C + L+ Q MP G L + + L
Sbjct: 60 PKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGS 118
Query: 1432 EQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491
+ L+ + +A + YL ++H DL NVL+ + DFG+A+LLD +D
Sbjct: 119 QDLLNWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLD-IDET 174
Query: 1492 KQTMT--LATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT-RRKPTDDMFTGEV 1544
+ I +MA E + DV+S+G+ + E +T KP D + E+
Sbjct: 175 EYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI 230
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 750 NLIGAGSFGSVYKAT-LPYGMNV----AIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLV 803
++G+G+FG+VYK +P G NV AIKV A K E V+ V +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
+++ C + L+ + MP G L + ++ L Q L+ + +A + YL
Sbjct: 83 RLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLED---V 138
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFG-----YMAPEYGS 918
++H DL NVL+ ++DFG+++LLD + +T A G +MA E
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLLD----IDETEYHADGGKVPIKWMALESIL 194
Query: 919 EGIVSTCGDVYSFGILMIETFT 940
+ DV+S+G+ + E T
Sbjct: 195 RRRFTHQSDVWSYGVTVWELMT 216
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQ---------EDRALKSFDAECEVMRRIRHR- 1391
LG G F V +A F A + +++ E RAL S E +++ I H
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKILIHIGHHL 92
Query: 1392 NLAKIVSSCSNPGFKAL-ILQYMPQGSLEKWLYS--------------HNYLLNIEQRLD 1436
N+ ++ +C+ PG + I+++ G+L +L S + L +E +
Sbjct: 93 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLIC 152
Query: 1437 IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDSMKQTM 1495
VA +E+L S IH DL N+LL + V + DFG+A+ + D +++
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 1496 TLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+L+ E +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAI----KSFDAECEVLRRVRHR 800
+G G+FG V +A +G++ VA+K+ +GA ++ +E ++L + H
Sbjct: 36 LGRGAFGQVIEADA-FGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHH 91
Query: 801 -NLVKIISSCSNHGFKAL-ILEYMPQGSLEKWLYS--------------HKYTLNIQQRL 844
N+V ++ +C+ G + I+E+ G+L +L S +K L ++ +
Sbjct: 92 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 845 DIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQT 903
VA +E+L IH DL N+LL + V + DFG+++ + D V +
Sbjct: 152 CYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 904 MTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+MAPE + + + DV+SFG+L+ E F+
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 19/208 (9%)
Query: 746 FSESNLIGAGSFGSVY----KAT-LPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHR 800
F L+G G+FG V KAT Y M + K + D + E VL+ RH
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQNTRHP 68
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG 860
L + + H ++EY G L L + + R ++ SALEYLH
Sbjct: 69 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH-- 125
Query: 861 HPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF----GYMAPEY 916
V++ D+K N++LD D ++DFG+ K + ++ T+ TF Y+APE
Sbjct: 126 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMKTFCGTPEYLAPEV 179
Query: 917 GSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ D + G++M E ++P
Sbjct: 180 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
Score = 55.5 bits (132), Expect = 3e-07, Method: Composition-based stats.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 1331 RLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFS----LQEDRALKSFDAEC 1382
++ N F LLG G F V KAT G A+KI + +D + E
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTV-TES 59
Query: 1383 EVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVA 1442
V++ RH L + + +++Y G L L S + E+ ++
Sbjct: 60 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIV 118
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV-DSMKQTMTLATIG 1501
ALEYLH S +++ D+K N++LD D + DFG+ K +G+ D T
Sbjct: 119 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPE 173
Query: 1502 YMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
Y+APE + + D + G++M E + R P
Sbjct: 174 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 19/208 (9%)
Query: 746 FSESNLIGAGSFGSVY----KAT-LPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHR 800
F L+G G+FG V KAT Y M + K + D + E VL+ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQNTRHP 65
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG 860
L + + H ++EY G L L + + R ++ SALEYLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH-- 122
Query: 861 HPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF----GYMAPEY 916
V++ D+K N++LD D ++DFG+ K + ++ T+ TF Y+APE
Sbjct: 123 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMKTFCGTPEYLAPEV 176
Query: 917 GSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ D + G++M E ++P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
Score = 55.5 bits (132), Expect = 3e-07, Method: Composition-based stats.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 1331 RLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFS----LQEDRALKSFDAEC 1382
++ N F LLG G F V KAT G A+KI + +D + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTV-TES 56
Query: 1383 EVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVA 1442
V++ RH L + + +++Y G L L S + E+ ++
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIV 115
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV-DSMKQTMTLATIG 1501
ALEYLH S +++ D+K N++LD D + DFG+ K +G+ D T
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPE 170
Query: 1502 YMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
Y+APE + + D + G++M E + R P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 19/208 (9%)
Query: 746 FSESNLIGAGSFGSVY----KAT-LPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHR 800
F L+G G+FG V KAT Y M + K + D + E VL+ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQNTRHP 65
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG 860
L + + H ++EY G L L + + R ++ SALEYLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH-- 122
Query: 861 HPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF----GYMAPEY 916
V++ D+K N++LD D ++DFG+ K + ++ T+ TF Y+APE
Sbjct: 123 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMKTFCGTPEYLAPEV 176
Query: 917 GSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ D + G++M E ++P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
Score = 55.5 bits (132), Expect = 3e-07, Method: Composition-based stats.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 1331 RLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFS----LQEDRALKSFDAEC 1382
++ N F LLG G F V KAT G A+KI + +D + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTV-TES 56
Query: 1383 EVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVA 1442
V++ RH L + + +++Y G L L S + E+ ++
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIV 115
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV-DSMKQTMTLATIG 1501
ALEYLH S +++ D+K N++LD D + DFG+ K +G+ D T
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPE 170
Query: 1502 YMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
Y+APE + + D + G++M E + R P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 746 FSESNLIGAGSFGSVYKATLPYGMNV-AIKVFNLQLDGAIKSF-DAECEVLRRVRHRNLV 803
F++ IG GSFG V+K V AIK+ +L+ E VL + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
K S +I+EY+ GS L L+ Q I+ ++ L+YLH
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSEKK- 145
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVS 923
IH D+K +NVLL + L+DFG++ L + + + + T +MAPE +
Sbjct: 146 --IHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNTFVGTPFWMAPEVIKQSAYD 202
Query: 924 TCGDVYSFGILMIETFTRKMPTDEM 948
+ D++S GI IE + P E+
Sbjct: 203 SKADIWSLGITAIELARGEPPHSEL 227
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 29/211 (13%)
Query: 1337 FSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKI 1396
F++ +G G F V+K N K+ A+K D E + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGI----DNRTQKVV------AIKIIDLEEAEDEIEDIQQEITV 78
Query: 1397 VSSCSNPGFKA------------LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACA 1444
+S C +P +I++Y+ GS L L+ Q I+ ++
Sbjct: 79 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKG 136
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+YLH S IH D+K +NVLL + L DFG+A L +K+ + T +MA
Sbjct: 137 LDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT-QIKRNTFVGTPFWMA 192
Query: 1505 PEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
PE + + D++S GI +E L R +P
Sbjct: 193 PEVIKQSAYDSKADIWSLGITAIE-LARGEP 222
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 37/233 (15%)
Query: 732 RRISYQELQRLTDGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFDA- 789
+RI Y ++ F +L+G G++G V AT P G VAIK I+ FD
Sbjct: 3 KRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK--------KIEPFDKP 50
Query: 790 --------ECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQ 841
E ++L+ +H N++ I + F+ Y+ Q ++ L+ ++ Q
Sbjct: 51 LFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHR---VISTQ 107
Query: 842 QRLDIMID--VASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS 899
D I + L + H + VIH DLKPSN+L++ + + DFG+++++D +
Sbjct: 108 MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 900 VTQTMT---------LATFGYMAPEYG-SEGIVSTCGDVYSFGILMIETFTRK 942
T +AT Y APE + S DV+S G ++ E F R+
Sbjct: 168 DNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 39/234 (16%)
Query: 1323 RRISYQELRLATNGFSESNLLGTGIFSSVYKATFAD-GTNAAIK--------IFSLQEDR 1373
+RI Y ++ F +LLG G + V AT G AIK +F+L+ R
Sbjct: 3 KRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR 58
Query: 1374 ALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFK----ALILQYMPQGSLEKWLYSHNYLL 1429
+K +++ +H N+ I + F+ I+Q + Q L + + + +L
Sbjct: 59 EIK-------ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ--ML 109
Query: 1430 NIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLD--G 1487
+ + + A++ LH +++IH DLKPSN+L++ + + DFG+A+++D
Sbjct: 110 SDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 1488 VDSMKQT-------MTLATIGYMAPEYG-SEGIVSTSGDVYSFGILMMETLTRR 1533
D+ + T +AT Y APE + S + DV+S G ++ E RR
Sbjct: 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 31/218 (14%)
Query: 749 SNLIGAGSFGSVYKATLPY-GMNVAIKVFN-----LQLDGAIKSFDAECEVLRRVRHRNL 802
S+++G G+ +V++ G AIKVFN +D ++ F EVL+++ H+N+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREF----EVLKKLNHKNI 69
Query: 803 VKI--ISSCSNHGFKALILEYMPQGSLEKWLY--SHKYTLNIQQRLDIMIDVASALEYLH 858
VK+ I + K LI+E+ P GSL L S+ Y L + L ++ DV + +L
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 859 HGHPTPVIHCDLKPSNVLL----DDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAP 914
++H ++KP N++ D +V L+DFG ++ L ED T Y+ P
Sbjct: 130 E---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL--EDDEQFVXLYGTEEYLHP 184
Query: 915 EYGSEGIV--------STCGDVYSFGILMIETFTRKMP 944
+ ++ D++S G+ T +P
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 1340 SNLLGTGIFSSVYKATFAD-GTNAAIKIFS-LQEDRALKSFDAECEVMRRIRHRNLAKI- 1396
S++LG G ++V++ G AIK+F+ + R + E EV++++ H+N+ K+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 1397 -VSSCSNPGFKALILQYMPQGSLEKWLY--SHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
+ + K LI+++ P GSL L S+ Y L + L ++ DV + +L +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE--- 130
Query: 1454 TSIIHCDLKPSNVLL----DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGS 1509
I+H ++KP N++ D V L DFG A+ L+ D + T Y+ P
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE--DDEQFVXLYGTEEYLHP---- 184
Query: 1510 EGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLP 1555
D+Y +L + + T D+++ V H SLP
Sbjct: 185 --------DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 34/217 (15%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQ---------EDRALKSFDAECEVMRRIRHR- 1391
LG G F V +A F A + +++ E RAL S E +++ I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKILIHIGHHL 82
Query: 1392 NLAKIVSSCSNPGFKAL-ILQYMPQGSLEKWLYS---------------HNYLLNIEQRL 1435
N+ ++ +C+ PG + I+++ G+L +L S + L +E +
Sbjct: 83 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDSMKQT 1494
VA +E+L S IH DL N+LL + V + DFG+A+ + D +++
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 1495 MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+L+ E +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAI----KSFDAECEVLRRVRHR 800
+G G+FG V +A +G++ VA+K+ +GA ++ +E ++L + H
Sbjct: 26 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHH 81
Query: 801 -NLVKIISSCSNHGFKAL-ILEYMPQGSLEKWLYS---------------HKYTLNIQQR 843
N+V ++ +C+ G + I+E+ G+L +L S +K L ++
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 844 LDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQ 902
+ VA +E+L IH DL N+LL + V + DFG+++ + D V +
Sbjct: 142 ICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 903 TMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+MAPE + + + DV+SFG+L+ E F+
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin
Receptor Tyrosine Kinase
Length = 306
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 112/246 (45%), Gaps = 31/246 (12%)
Query: 1343 LGTGIFSSVYKATFAD------GTNAAIKIFSLQEDRALKS---FDAECEVMRRIRHRNL 1393
LG G F VY+ D T A+K ++ E +L+ F E VM+ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVK--TVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLN---------IEQRLDIMIDVACA 1444
+++ S ++++ M G L+ +L S +++ + + ++A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQT-MTLATIGYM 1503
+ YL+ + +H +L N ++ D +GDFG+ + + D ++ L + +M
Sbjct: 143 MAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE-------ESLPD 1556
APE +G+ +TS D++SFG+++ E + + + E LK ++ ++ P+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 1557 AVTDVI 1562
VTD++
Sbjct: 260 RVTDLM 265
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 22/204 (10%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVFN--LQLDGAIKSFDAECEVLRRVRHRNLV 803
+G GSFG VY+ VA+K N L I+ F E V++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 83
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLN---------IQQRLDIMIDVASAL 854
+++ S +++E M G L+ +L S + +Q+ + + ++A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFGYMA 913
YL+ +H +L N ++ D + DFG+++ + D + L +MA
Sbjct: 144 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 914 PEYGSEGIVSTCGDVYSFGILMIE 937
PE +G+ +T D++SFG+++ E
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 112/246 (45%), Gaps = 31/246 (12%)
Query: 1343 LGTGIFSSVYKATFAD------GTNAAIKIFSLQEDRALKS---FDAECEVMRRIRHRNL 1393
LG G F VY+ D T A+K ++ E +L+ F E VM+ ++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVK--TVNESASLRERIEFLNEASVMKGFTCHHV 83
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLN---------IEQRLDIMIDVACA 1444
+++ S ++++ M G L+ +L S +++ + + ++A
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQT-MTLATIGYM 1503
+ YL+ + +H +L N ++ D +GDFG+ + + D ++ L + +M
Sbjct: 144 MAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE-------ESLPD 1556
APE +G+ +TS D++SFG+++ E + + + E LK ++ ++ P+
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 260
Query: 1557 AVTDVI 1562
VTD++
Sbjct: 261 RVTDLM 266
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 22/204 (10%)
Query: 752 IGAGSFGSVYKATL------PYGMNVAIKVFN--LQLDGAIKSFDAECEVLRRVRHRNLV 803
+G GSFG VY+ VA+K N L I+ F E V++ ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHHVV 84
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLN---------IQQRLDIMIDVASAL 854
+++ S +++E M G L+ +L S + +Q+ + + ++A +
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLATFGYMA 913
YL+ +H +L N ++ D + DFG+++ + D + L +MA
Sbjct: 145 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 914 PEYGSEGIVSTCGDVYSFGILMIE 937
PE +G+ +T D++SFG+++ E
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWE 225
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 62.0 bits (149), Expect = 3e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 13/205 (6%)
Query: 746 FSESNLIGAGSFGSVY----KAT-LPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHR 800
F L+G G+FG V KAT Y M + K + D + E VL+ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQNTRHP 65
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG 860
L + + H ++EY G L L + + R ++ SALEYLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH-- 122
Query: 861 HPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDG-EDSVTQTMTLATFGYMAPEYGSE 919
V++ D+K N++LD D ++DFG+ K +G D T T Y+APE +
Sbjct: 123 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLED 179
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
D + G++M E ++P
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLP 204
Score = 55.5 bits (132), Expect = 3e-07, Method: Composition-based stats.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 1331 RLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFS----LQEDRALKSFDAEC 1382
++ N F LLG G F V KAT G A+KI + +D + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTV-TES 56
Query: 1383 EVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVA 1442
V++ RH L + + +++Y G L L S + E+ ++
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIV 115
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV-DSMKQTMTLATIG 1501
ALEYLH S +++ D+K N++LD D + DFG+ K +G+ D T
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPE 170
Query: 1502 YMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
Y+APE + + D + G++M E + R P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.0 bits (149), Expect = 3e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 13/205 (6%)
Query: 746 FSESNLIGAGSFGSVY----KAT-LPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHR 800
F L+G G+FG V KAT Y M + K + D + E VL+ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQNTRHP 65
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG 860
L + + H ++EY G L L + + R ++ SALEYLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH-- 122
Query: 861 HPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDG-EDSVTQTMTLATFGYMAPEYGSE 919
V++ D+K N++LD D ++DFG+ K +G D T T Y+APE +
Sbjct: 123 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLED 179
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
D + G++M E ++P
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLP 204
Score = 55.5 bits (132), Expect = 3e-07, Method: Composition-based stats.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 1331 RLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFS----LQEDRALKSFDAEC 1382
++ N F LLG G F V KAT G A+KI + +D + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTV-TES 56
Query: 1383 EVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVA 1442
V++ RH L + + +++Y G L L S + E+ ++
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIV 115
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV-DSMKQTMTLATIG 1501
ALEYLH S +++ D+K N++LD D + DFG+ K +G+ D T
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPE 170
Query: 1502 YMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
Y+APE + + D + G++M E + R P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 62.0 bits (149), Expect = 3e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 13/205 (6%)
Query: 746 FSESNLIGAGSFGSVY----KAT-LPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHR 800
F L+G G+FG V KAT Y M + K + D + E VL+ RH
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQNTRHP 70
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG 860
L + + H ++EY G L L + + R ++ SALEYLH
Sbjct: 71 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH-- 127
Query: 861 HPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDG-EDSVTQTMTLATFGYMAPEYGSE 919
V++ D+K N++LD D ++DFG+ K +G D T T Y+APE +
Sbjct: 128 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLED 184
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
D + G++M E ++P
Sbjct: 185 NDYGRAVDWWGLGVVMYEMMCGRLP 209
Score = 55.5 bits (132), Expect = 3e-07, Method: Composition-based stats.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 1331 RLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFS----LQEDRALKSFDAEC 1382
++ N F LLG G F V KAT G A+KI + +D + E
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTV-TES 61
Query: 1383 EVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVA 1442
V++ RH L + + +++Y G L L S + E+ ++
Sbjct: 62 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIV 120
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV-DSMKQTMTLATIG 1501
ALEYLH S +++ D+K N++LD D + DFG+ K +G+ D T
Sbjct: 121 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPE 175
Query: 1502 YMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
Y+APE + + D + G++M E + R P
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 62.0 bits (149), Expect = 3e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 13/205 (6%)
Query: 746 FSESNLIGAGSFGSVY----KAT-LPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHR 800
F L+G G+FG V KAT Y M + K + D + E VL+ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQNTRHP 65
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG 860
L + + H ++EY G L L + + R ++ SALEYLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH-- 122
Query: 861 HPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDG-EDSVTQTMTLATFGYMAPEYGSE 919
V++ D+K N++LD D ++DFG+ K +G D T T Y+APE +
Sbjct: 123 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLED 179
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
D + G++M E ++P
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLP 204
Score = 55.5 bits (132), Expect = 3e-07, Method: Composition-based stats.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 1331 RLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFS----LQEDRALKSFDAEC 1382
++ N F LLG G F V KAT G A+KI + +D + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTV-TES 56
Query: 1383 EVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVA 1442
V++ RH L + + +++Y G L L S + E+ ++
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIV 115
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV-DSMKQTMTLATIG 1501
ALEYLH S +++ D+K N++LD D + DFG+ K +G+ D T
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPE 170
Query: 1502 YMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
Y+APE + + D + G++M E + R P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 746 FSESNLIGAGSFGSVYKATLPYGMNV-AIKVFNLQLDGAIKSF-DAECEVLRRVRHRNLV 803
F++ IG GSFG V+K V AIK+ +L+ E VL + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
K S +I+EY+ GS L L+ Q I+ ++ L+YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSEKK- 125
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVS 923
IH D+K +NVLL + L+DFG++ L + + + + T +MAPE +
Sbjct: 126 --IHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIKQSAYD 182
Query: 924 TCGDVYSFGILMIETFTRKMPTDEM 948
+ D++S GI IE + P E+
Sbjct: 183 SKADIWSLGITAIELARGEPPHSEL 207
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 87/212 (41%), Gaps = 31/212 (14%)
Query: 1337 FSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKI 1396
F++ +G G F V+K N K+ A+K D E + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGI----DNRTQKVV------AIKIIDLEEAEDEIEDIQQEITV 58
Query: 1397 VSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-------------LNIEQRLDIMIDVAC 1443
+S C +P Y+ L W+ YL L+ Q I+ ++
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKL--WIIM-EYLGGGSALDLLEPGPLDETQIATILREILK 115
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
L+YLH S IH D+K +NVLL + L DFG+A L +K+ + T +M
Sbjct: 116 GLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT-QIKRNXFVGTPFWM 171
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
APE + + D++S GI +E L R +P
Sbjct: 172 APEVIKQSAYDSKADIWSLGITAIE-LARGEP 202
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 746 FSESNLIGAGSFGSVYKATLPYGMNV-AIKVFNLQLDGAIKSF-DAECEVLRRVRHRNLV 803
F++ IG GSFG V+K V AIK+ +L+ E VL + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
K S +I+EY+ GS L L+ Q I+ ++ L+YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSEKK- 125
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVS 923
IH D+K +NVLL + L+DFG++ L + + + + T +MAPE +
Sbjct: 126 --IHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNTFVGTPFWMAPEVIKQSAYD 182
Query: 924 TCGDVYSFGILMIETFTRKMPTDEM 948
+ D++S GI IE + P E+
Sbjct: 183 SKADIWSLGITAIELARGEPPHSEL 207
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 87/212 (41%), Gaps = 31/212 (14%)
Query: 1337 FSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKI 1396
F++ +G G F V+K N K+ A+K D E + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGI----DNRTQKVV------AIKIIDLEEAEDEIEDIQQEITV 58
Query: 1397 VSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-------------LNIEQRLDIMIDVAC 1443
+S C +P Y+ L W+ YL L+ Q I+ ++
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKL--WIIM-EYLGGGSALDLLEPGPLDETQIATILREILK 115
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
L+YLH S IH D+K +NVLL + L DFG+A L +K+ + T +M
Sbjct: 116 GLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT-QIKRNTFVGTPFWM 171
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
APE + + D++S GI +E L R +P
Sbjct: 172 APEVIKQSAYDSKADIWSLGITAIE-LARGEP 202
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 62.0 bits (149), Expect = 3e-09, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAI----KSFDAECEVLRRV-RH 799
+G G+FG V +A +G++ VA+K+ +GA ++ +E ++L + H
Sbjct: 35 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHH 90
Query: 800 RNLVKIISSCSNHGFKAL-ILEYMPQGSLEKWLYS---------------HKYTLNIQQR 843
N+V ++ +C+ G + I+E+ G+L +L S +K L ++
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 844 LDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQ 902
+ VA +E+L IH DL N+LL + V + DFG+++ + D V +
Sbjct: 151 ICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRK 207
Query: 903 TMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+MAPE + + + DV+SFG+L+ E F+
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Score = 61.2 bits (147), Expect = 4e-09, Method: Composition-based stats.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 34/217 (15%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQ---------EDRALKSFDAECEVMRRI-RHR 1391
LG G F V +A F A + +++ E RAL S E +++ I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKILIHIGHHL 91
Query: 1392 NLAKIVSSCSNPGFKAL-ILQYMPQGSLEKWLYS---------------HNYLLNIEQRL 1435
N+ ++ +C+ PG + I+++ G+L +L S + L +E +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDSMKQT 1494
VA +E+L S IH DL N+LL + V + DFG+A+ + D +++
Sbjct: 152 CYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKG 208
Query: 1495 MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+L+ E +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 62.0 bits (149), Expect = 3e-09, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAI----KSFDAECEVLRRV-RH 799
+G G+FG V +A +G++ VA+K+ +GA ++ +E ++L + H
Sbjct: 35 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHH 90
Query: 800 RNLVKIISSCSNHGFKAL-ILEYMPQGSLEKWLYS---------------HKYTLNIQQR 843
N+V ++ +C+ G + I+E+ G+L +L S +K L ++
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 844 LDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQ 902
+ VA +E+L IH DL N+LL + V + DFG+++ + D V +
Sbjct: 151 ICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 903 TMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+MAPE + + + DV+SFG+L+ E F+
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Score = 61.2 bits (147), Expect = 4e-09, Method: Composition-based stats.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 34/217 (15%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQ---------EDRALKSFDAECEVMRRI-RHR 1391
LG G F V +A F A + +++ E RAL S E +++ I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKILIHIGHHL 91
Query: 1392 NLAKIVSSCSNPGFKAL-ILQYMPQGSLEKWLYS---------------HNYLLNIEQRL 1435
N+ ++ +C+ PG + I+++ G+L +L S + L +E +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDSMKQT 1494
VA +E+L S IH DL N+LL + V + DFG+A+ + D +++
Sbjct: 152 CYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 1495 MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+L+ E +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 746 FSESNLIGAGSFGSVYKATLPYGMNV-AIKVFNLQLDGAIKSF-DAECEVLRRVRHRNLV 803
F++ IG GSFG V+K V AIK+ +L+ E VL + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
K S +I+EY+ GS L L+ Q I+ ++ L+YLH
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHS---E 138
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVS 923
IH D+K +NVLL + L+DFG++ L + + + + T +MAPE +
Sbjct: 139 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIKQSAYD 197
Query: 924 TCGDVYSFGILMIETFTRKMPTDEM 948
+ D++S GI IE + P E+
Sbjct: 198 SKADIWSLGITAIELARGEPPHSEL 222
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 87/212 (41%), Gaps = 31/212 (14%)
Query: 1337 FSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKI 1396
F++ +G G F V+K N K+ A+K D E + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGI----DNRTQKVV------AIKIIDLEEAEDEIEDIQQEITV 73
Query: 1397 VSSCSNPGFKALILQYMPQGSLEKWLYSHNYL-------------LNIEQRLDIMIDVAC 1443
+S C +P Y+ L W+ YL L+ Q I+ ++
Sbjct: 74 LSQCDSPYVTKYYGSYLKDTKL--WIIM-EYLGGGSALDLLEPGPLDETQIATILREILK 130
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
L+YLH S IH D+K +NVLL + L DFG+A L +K+ + T +M
Sbjct: 131 GLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT-QIKRNXFVGTPFWM 186
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
APE + + D++S GI +E L R +P
Sbjct: 187 APEVIKQSAYDSKADIWSLGITAIE-LARGEP 217
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 34/217 (15%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQ---------EDRALKSFDAECEVMRRIRHR- 1391
LG G F V +A F A + +++ E RAL S E +++ I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKILIHIGHHL 82
Query: 1392 NLAKIVSSCSNPGFKALIL-QYMPQGSLEKWLYS---------------HNYLLNIEQRL 1435
N+ ++ +C+ PG +++ ++ G+L +L S + L +E +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDSMKQT 1494
VA +E+L S IH DL N+LL + V + DFG+A+ + D +++
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 1495 MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+L+ E +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAI----KSFDAECEVLRRVRHR 800
+G G+FG V +A +G++ VA+K+ +GA ++ +E ++L + H
Sbjct: 26 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHH 81
Query: 801 -NLVKIISSCSNHGFKALIL-EYMPQGSLEKWLYS---------------HKYTLNIQQR 843
N+V ++ +C+ G +++ E+ G+L +L S +K L ++
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 844 LDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQ 902
+ VA +E+L IH DL N+LL + V + DFG+++ + D V +
Sbjct: 142 ICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 903 TMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+MAPE + + + DV+SFG+L+ E F+
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 100/229 (43%), Gaps = 33/229 (14%)
Query: 1330 LRLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRI 1388
LR A++ F E +LG G F V KA A D AIK E++ L + +E ++ +
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASL 59
Query: 1389 RH-------------RNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRL 1435
H RN K +++ + ++Y +L ++S N ++
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDSMK-- 1492
+ + AL Y+H S IIH DLKP N+ +D+ +GDFG+AK + +D +K
Sbjct: 120 RLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 1493 ----------QTMTLATIGYMAPEY-GSEGIVSTSGDVYSFGILMMETL 1530
T + T Y+A E G + D+YS GI+ E +
Sbjct: 177 SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 93/225 (41%), Gaps = 32/225 (14%)
Query: 741 RLTDGFSESNLIGAGSFGSVYKATLPYGMNV-AIKVFNLQLDGAIKSFDAECEVLRRVRH 799
R F E ++G G+FG V KA AIK + + + +E +L + H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 800 -------------RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDI 846
RN VK +++ + +EY +L ++S LN QQR +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSE--NLN-QQRDEY 118
Query: 847 MIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK---------LLDGE 897
LE L + H +IH DLKP N+ +D+ + DFG++K LD +
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 898 D----SVTQTMTLATFGYMAPEY-GSEGIVSTCGDVYSFGILMIE 937
+ S T + T Y+A E G + D+YS GI+ E
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A 2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 11/242 (4%)
Query: 1342 LLGTGIFSSVYKATFADGTNA-AIKIFS---LQEDRALKSFDAECEVMRRIRHRNLAKIV 1397
LG G F+ ++ + AD A KI L + + E + R + H+++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 1398 SSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSII 1457
+ F ++L+ + SL + L E R + + +YLH+ +I
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RVI 139
Query: 1458 HCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSG 1517
H DLK N+ L++D+ +GDFG+A ++ K+T+ T Y+APE S+ S
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTPNYIAPEVLSKKGHSFEV 198
Query: 1518 DVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTDVIDANLLSGEEEADIA 1576
DV+S G +M L + P + E L+ E S+P + V A+L+ + D
Sbjct: 199 DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQKMLQTDPT 257
Query: 1577 AK 1578
A+
Sbjct: 258 AR 259
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 5/167 (2%)
Query: 790 ECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMID 849
E + R + H+++V ++ F ++LE + SL + L+ + L + +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 125
Query: 850 VASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF 909
+ +YLH VIH DLK N+ L++D + DFG++ ++ + +T+ T
Sbjct: 126 IVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTP 181
Query: 910 GYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLK 956
Y+APE S+ S DV+S G +M K P + ET L+
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR 228
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 61.6 bits (148), Expect = 3e-09, Method: Composition-based stats.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 20/230 (8%)
Query: 722 ENDSLSLATWR-RISYQELQRLTDGFSESNLIGAGSFGSVY----KAT-LPYGMNVAIKV 775
E +SLA + R++ E + L L+G G+FG V KAT Y M + K
Sbjct: 132 EEMEVSLAKPKHRVTMNEFEYL-------KLLGKGTFGKVILVKEKATGRYYAMKILKKE 184
Query: 776 FNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK 835
+ D + E VL+ RH L + S H ++EY G L L +
Sbjct: 185 VIVAKDEVAHTL-TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER 243
Query: 836 YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLD 895
+ R ++ SAL+YLH V++ DLK N++LD D ++DFG+ K +
Sbjct: 244 VFSEDRARF-YGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--E 298
Query: 896 G-EDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMP 944
G +D T T Y+APE + D + G++M E ++P
Sbjct: 299 GIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
Score = 54.3 bits (129), Expect = 6e-07, Method: Composition-based stats.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 18/214 (8%)
Query: 1331 RLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFS----LQEDRALKSFDAEC 1382
R+ N F LLG G F V KAT G A+KI + +D + E
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTL-TEN 199
Query: 1383 EVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVA 1442
V++ RH L + S +++Y G L L S + + ++ ++
Sbjct: 200 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIV 258
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV-DSMKQTMTLATIG 1501
AL+YLH ++++ DLK N++LD D + DFG+ K +G+ D T
Sbjct: 259 SALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPE 314
Query: 1502 YMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
Y+APE + + D + G++M E + R P
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 61.6 bits (148), Expect = 3e-09, Method: Composition-based stats.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 20/230 (8%)
Query: 722 ENDSLSLATWR-RISYQELQRLTDGFSESNLIGAGSFGSVY----KAT-LPYGMNVAIKV 775
E +SLA + R++ E + L L+G G+FG V KAT Y M + K
Sbjct: 135 EEMEVSLAKPKHRVTMNEFEYL-------KLLGKGTFGKVILVKEKATGRYYAMKILKKE 187
Query: 776 FNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHK 835
+ D + E VL+ RH L + S H ++EY G L L +
Sbjct: 188 VIVAKDEVAHTL-TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER 246
Query: 836 YTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLD 895
+ R ++ SAL+YLH V++ DLK N++LD D ++DFG+ K +
Sbjct: 247 VFSEDRARF-YGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--E 301
Query: 896 G-EDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMP 944
G +D T T Y+APE + D + G++M E ++P
Sbjct: 302 GIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
Score = 54.3 bits (129), Expect = 6e-07, Method: Composition-based stats.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 18/214 (8%)
Query: 1331 RLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFS----LQEDRALKSFDAEC 1382
R+ N F LLG G F V KAT G A+KI + +D + E
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTL-TEN 202
Query: 1383 EVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVA 1442
V++ RH L + S +++Y G L L S + + ++ ++
Sbjct: 203 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIV 261
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV-DSMKQTMTLATIG 1501
AL+YLH ++++ DLK N++LD D + DFG+ K +G+ D T
Sbjct: 262 SALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPE 317
Query: 1502 YMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
Y+APE + + D + G++M E + R P
Sbjct: 318 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 11/242 (4%)
Query: 1342 LLGTGIFSSVYKATFADGTNA-AIKIFS---LQEDRALKSFDAECEVMRRIRHRNLAKIV 1397
LG G F+ ++ + AD A KI L + + E + R + H+++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 1398 SSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSII 1457
+ F ++L+ + SL + L E R + + +YLH+ +I
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RVI 139
Query: 1458 HCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSG 1517
H DLK N+ L++D+ +GDFG+A ++ K+T+ T Y+APE S+ S
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTPNYIAPEVLSKKGHSFEV 198
Query: 1518 DVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTDVIDANLLSGEEEADIA 1576
DV+S G +M L + P + E L+ E S+P + V A+L+ + D
Sbjct: 199 DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQKMLQTDPT 257
Query: 1577 AK 1578
A+
Sbjct: 258 AR 259
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 5/167 (2%)
Query: 790 ECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMID 849
E + R + H+++V ++ F ++LE + SL + L+ + L + +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 125
Query: 850 VASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF 909
+ +YLH VIH DLK N+ L++D + DFG++ ++ + +T+ T
Sbjct: 126 IVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTP 181
Query: 910 GYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLK 956
Y+APE S+ S DV+S G +M K P + ET L+
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR 228
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase
1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase
1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 11/242 (4%)
Query: 1342 LLGTGIFSSVYKATFADGTNA-AIKIFS---LQEDRALKSFDAECEVMRRIRHRNLAKIV 1397
LG G F+ ++ + AD A KI L + + E + R + H+++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 1398 SSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSII 1457
+ F ++L+ + SL + L E R + + +YLH+ +I
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-YLRQIVLGCQYLHR---NRVI 163
Query: 1458 HCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSG 1517
H DLK N+ L++D+ +GDFG+A ++ D ++ + T Y+APE S+ S
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKVLCGTPNYIAPEVLSKKGHSFEV 222
Query: 1518 DVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTDVIDANLLSGEEEADIA 1576
DV+S G +M L + P + E L+ E S+P + V A+L+ + D
Sbjct: 223 DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQKMLQTDPT 281
Query: 1577 AK 1578
A+
Sbjct: 282 AR 283
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 5/167 (2%)
Query: 790 ECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMID 849
E + R + H+++V ++ F ++LE + SL + L+ + L + +
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 149
Query: 850 VASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF 909
+ +YLH VIH DLK N+ L++D + DFG++ ++ D + + T
Sbjct: 150 IVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKVLCGTP 205
Query: 910 GYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLK 956
Y+APE S+ S DV+S G +M K P + ET L+
Sbjct: 206 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR 252
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 746 FSESNLIGAGSFGSVYKATLPYGMNV-AIKVFNLQLDGAIKSF-DAECEVLRRVRHRNLV 803
F++ IG GSFG V+K V AIK+ +L+ E VL + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
K S +I+EY+ GS L + + + Q ++ ++ L+YLH
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF--DEFQIATMLKEILKGLDYLHSEKK- 141
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVS 923
IH D+K +NVLL + L+DFG++ L + + + + T +MAPE +
Sbjct: 142 --IHRDIKAANVLLSEQGDVKLADFGVAGQLT-DTQIKRNTFVGTPFWMAPEVIQQSAYD 198
Query: 924 TCGDVYSFGILMIETFTRKMPTDEM 948
+ D++S GI IE + P +M
Sbjct: 199 SKADIWSLGITAIELAKGEPPNSDM 223
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 8/205 (3%)
Query: 1337 FSESNLLGTGIFSSVYKATFADGTNA-AIKIFSLQEDRALKSF-DAECEVMRRIRHRNLA 1394
F++ +G G F V+K AIKI L+E E V+ + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 1395 KIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYST 1454
K S +I++Y+ GS L + + + Q ++ ++ L+YLH S
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF--DEFQIATMLKEILKGLDYLH---SE 139
Query: 1455 SIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVS 1514
IH D+K +NVLL + L DFG+A L +K+ + T +MAPE +
Sbjct: 140 KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT-QIKRNTFVGTPFWMAPEVIQQSAYD 198
Query: 1515 TSGDVYSFGILMMETLTRRKPTDDM 1539
+ D++S GI +E P DM
Sbjct: 199 SKADIWSLGITAIELAKGEPPNSDM 223
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 61.6 bits (148), Expect = 4e-09, Method: Composition-based stats.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 739 LQRLT-DGFSESNLIGAGSFGSVY----KAT-LPYGMNVAIKVFNLQLDGAIKSFDAECE 792
+ R+T + F L+G G+FG V KAT Y M + K + D + E
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL-TENR 61
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
VL+ RH L + S H ++EY G L L + + R ++ S
Sbjct: 62 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVS 120
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDG-EDSVTQTMTLATFGY 911
AL+YLH V++ DLK N++LD D ++DFG+ K +G +D T T Y
Sbjct: 121 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEY 176
Query: 912 MAPEYGSEGIVSTCGDVYSFGILMIETFTRKMP 944
+APE + D + G++M E ++P
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
Score = 54.3 bits (129), Expect = 6e-07, Method: Composition-based stats.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 18/214 (8%)
Query: 1331 RLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFS----LQEDRALKSFDAEC 1382
R+ N F LLG G F V KAT G A+KI + +D + E
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTL-TEN 60
Query: 1383 EVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVA 1442
V++ RH L + S +++Y G L L S + + ++ ++
Sbjct: 61 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIV 119
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV-DSMKQTMTLATIG 1501
AL+YLH ++++ DLK N++LD D + DFG+ K +G+ D T
Sbjct: 120 SALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPE 175
Query: 1502 YMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
Y+APE + + D + G++M E + R P
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 34/217 (15%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQ---------EDRALKSFDAECEVMRRIRHR- 1391
LG G F V +A F A + +++ E RAL S E +++ I H
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKILIHIGHHL 128
Query: 1392 NLAKIVSSCSNPGFKAL-ILQYMPQGSLEKWLYS---------------HNYLLNIEQRL 1435
N+ ++ +C+ PG + I+++ G+L +L S + L +E +
Sbjct: 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDSMKQT 1494
VA +E+L S IH DL N+LL + V + DFG+A+ + D +++
Sbjct: 189 CYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 1495 MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+L+ E +
Sbjct: 246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAI----KSFDAECEVLRRVRHR 800
+G G+FG V +A +G++ VA+K+ +GA ++ +E ++L + H
Sbjct: 72 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHH 127
Query: 801 -NLVKIISSCSNHGFKAL-ILEYMPQGSLEKWLYS---------------HKYTLNIQQR 843
N+V ++ +C+ G + I+E+ G+L +L S +K L ++
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 844 LDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQ 902
+ VA +E+L IH DL N+LL + V + DFG+++ + D V +
Sbjct: 188 ICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 244
Query: 903 TMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+MAPE + + + DV+SFG+L+ E F+
Sbjct: 245 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 61.6 bits (148), Expect = 4e-09, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 89/205 (43%), Gaps = 12/205 (5%)
Query: 746 FSESNLIGAGSFGSVY----KAT-LPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHR 800
F L+G G+FG V KAT Y M + K + D + E VL+ RH
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL-TENRVLQNSRHP 68
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG 860
L + S H ++EY G L L + + R ++ SAL+YLH
Sbjct: 69 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLHS- 126
Query: 861 HPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDG-EDSVTQTMTLATFGYMAPEYGSE 919
V++ DLK N++LD D ++DFG+ K +G +D T T Y+APE +
Sbjct: 127 -EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLED 183
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
D + G++M E ++P
Sbjct: 184 NDYGRAVDWWGLGVVMYEMMCGRLP 208
Score = 54.3 bits (129), Expect = 6e-07, Method: Composition-based stats.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 18/214 (8%)
Query: 1331 RLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFS----LQEDRALKSFDAEC 1382
R+ N F LLG G F V KAT G A+KI + +D + E
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTL-TEN 59
Query: 1383 EVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVA 1442
V++ RH L + S +++Y G L L S + + ++ ++
Sbjct: 60 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIV 118
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV-DSMKQTMTLATIG 1501
AL+YLH ++++ DLK N++LD D + DFG+ K +G+ D T
Sbjct: 119 SALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPE 174
Query: 1502 YMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
Y+APE + + D + G++M E + R P
Sbjct: 175 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 61.6 bits (148), Expect = 4e-09, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 89/205 (43%), Gaps = 12/205 (5%)
Query: 746 FSESNLIGAGSFGSVY----KAT-LPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHR 800
F L+G G+FG V KAT Y M + K + D + E VL+ RH
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL-TENRVLQNSRHP 70
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHG 860
L + S H ++EY G L L + + R ++ SAL+YLH
Sbjct: 71 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLHS- 128
Query: 861 HPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDG-EDSVTQTMTLATFGYMAPEYGSE 919
V++ DLK N++LD D ++DFG+ K +G +D T T Y+APE +
Sbjct: 129 -EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLED 185
Query: 920 GIVSTCGDVYSFGILMIETFTRKMP 944
D + G++M E ++P
Sbjct: 186 NDYGRAVDWWGLGVVMYEMMCGRLP 210
Score = 54.3 bits (129), Expect = 6e-07, Method: Composition-based stats.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 18/214 (8%)
Query: 1331 RLATNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFS----LQEDRALKSFDAEC 1382
R+ N F LLG G F V KAT G A+KI + +D + E
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTL-TEN 61
Query: 1383 EVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVA 1442
V++ RH L + S +++Y G L L S + + ++ ++
Sbjct: 62 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIV 120
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV-DSMKQTMTLATIG 1501
AL+YLH ++++ DLK N++LD D + DFG+ K +G+ D T
Sbjct: 121 SALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPE 176
Query: 1502 YMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
Y+APE + + D + G++M E + R P
Sbjct: 177 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 34/217 (15%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQ---------EDRALKSFDAECEVMRRIRHR- 1391
LG G F V +A F A + +++ E RAL S E +++ I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKILIHIGHHL 82
Query: 1392 NLAKIVSSCSNPGFKALIL-QYMPQGSLEKWLYS---------------HNYLLNIEQRL 1435
N+ ++ +C+ PG +++ ++ G+L +L S + L +E +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDSMKQT 1494
VA +E+L S IH DL N+LL + V + DFG+A+ + D +++
Sbjct: 143 CYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 1495 MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+L+ E +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAI----KSFDAECEVLRRVRHR 800
+G G+FG V +A +G++ VA+K+ +GA ++ +E ++L + H
Sbjct: 26 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHH 81
Query: 801 -NLVKIISSCSNHGFKALIL-EYMPQGSLEKWLYS---------------HKYTLNIQQR 843
N+V ++ +C+ G +++ E+ G+L +L S +K L ++
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 844 LDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQ 902
+ VA +E+L IH DL N+LL + V + DFG+++ + D V +
Sbjct: 142 ICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 903 TMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+MAPE + + + DV+SFG+L+ E F+
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 61.6 bits (148), Expect = 4e-09, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAI----KSFDAECEVLRRV-RH 799
+G G+FG V +A +G++ VA+K+ +GA ++ +E ++L + H
Sbjct: 37 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHH 92
Query: 800 RNLVKIISSCSNHGFKAL-ILEYMPQGSLEKWLYS---------------HKYTLNIQQR 843
N+V ++ +C+ G + I+E+ G+L +L S +K L ++
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 844 LDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQ 902
+ VA +E+L IH DL N+LL + V + DFG+++ + D V +
Sbjct: 153 ICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 209
Query: 903 TMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+MAPE + + + DV+SFG+L+ E F+
Sbjct: 210 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
Score = 60.8 bits (146), Expect = 6e-09, Method: Composition-based stats.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 34/217 (15%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQ---------EDRALKSFDAECEVMRRI-RHR 1391
LG G F V +A F A + +++ E RAL S E +++ I H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKILIHIGHHL 93
Query: 1392 NLAKIVSSCSNPGFKAL-ILQYMPQGSLEKWLYS---------------HNYLLNIEQRL 1435
N+ ++ +C+ PG + I+++ G+L +L S + L +E +
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLI 153
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDSMKQT 1494
VA +E+L S IH DL N+LL + V + DFG+A+ + D +++
Sbjct: 154 CYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 1495 MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+L+ E +
Sbjct: 211 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 61.6 bits (148), Expect = 4e-09, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAI----KSFDAECEVLRRV-RH 799
+G G+FG V +A +G++ VA+K+ +GA ++ +E ++L + H
Sbjct: 35 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHH 90
Query: 800 RNLVKIISSCSNHGFKAL-ILEYMPQGSLEKWLYS---------------HKYTLNIQQR 843
N+V ++ +C+ G + I+E+ G+L +L S +K L ++
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 844 LDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQ 902
+ VA +E+L IH DL N+LL + V + DFG+++ + D V +
Sbjct: 151 ICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 207
Query: 903 TMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+MAPE + + + DV+SFG+L+ E F+
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Score = 60.8 bits (146), Expect = 6e-09, Method: Composition-based stats.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 34/217 (15%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQ---------EDRALKSFDAECEVMRRI-RHR 1391
LG G F V +A F A + +++ E RAL S E +++ I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKILIHIGHHL 91
Query: 1392 NLAKIVSSCSNPGFKAL-ILQYMPQGSLEKWLYS---------------HNYLLNIEQRL 1435
N+ ++ +C+ PG + I+++ G+L +L S + L +E +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDSMKQT 1494
VA +E+L S IH DL N+LL + V + DFG+A+ + D +++
Sbjct: 152 CYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 1495 MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+L+ E +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 11/242 (4%)
Query: 1342 LLGTGIFSSVYKATFADGTNA-AIKIFS---LQEDRALKSFDAECEVMRRIRHRNLAKIV 1397
LG G F+ ++ + AD A KI L + + E + R + H+++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 1398 SSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSII 1457
+ F ++L+ + SL + L E R + + +YLH+ +I
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RVI 143
Query: 1458 HCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSG 1517
H DLK N+ L++D+ +GDFG+A ++ K+T+ T Y+APE S+ S
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTPNYIAPEVLSKKGHSFEV 202
Query: 1518 DVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTDVIDANLLSGEEEADIA 1576
DV+S G +M L + P + E L+ E S+P + V A+L+ + D
Sbjct: 203 DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQKMLQTDPT 261
Query: 1577 AK 1578
A+
Sbjct: 262 AR 263
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 5/167 (2%)
Query: 790 ECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMID 849
E + R + H+++V ++ F ++LE + SL + L+ + L + +
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 129
Query: 850 VASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF 909
+ +YLH VIH DLK N+ L++D + DFG++ ++ + +T+ T
Sbjct: 130 IVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTP 185
Query: 910 GYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLK 956
Y+APE S+ S DV+S G +M K P + ET L+
Sbjct: 186 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR 232
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 11/242 (4%)
Query: 1342 LLGTGIFSSVYKATFADGTNA-AIKIFS---LQEDRALKSFDAECEVMRRIRHRNLAKIV 1397
LG G F+ ++ + AD A KI L + + E + R + H+++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 1398 SSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSII 1457
+ F ++L+ + SL + L E R + + +YLH+ +I
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RVI 161
Query: 1458 HCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSG 1517
H DLK N+ L++D+ +GDFG+A ++ D ++ + T Y+APE S+ S
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKVLCGTPNYIAPEVLSKKGHSFEV 220
Query: 1518 DVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTDVIDANLLSGEEEADIA 1576
DV+S G +M L + P + E L+ E S+P + V A+L+ + D
Sbjct: 221 DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQKMLQTDPT 279
Query: 1577 AK 1578
A+
Sbjct: 280 AR 281
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 5/167 (2%)
Query: 790 ECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMID 849
E + R + H+++V ++ F ++LE + SL + L+ + L + +
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 147
Query: 850 VASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF 909
+ +YLH VIH DLK N+ L++D + DFG++ ++ D + + T
Sbjct: 148 IVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKVLCGTP 203
Query: 910 GYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLK 956
Y+APE S+ S DV+S G +M K P + ET L+
Sbjct: 204 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR 250
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 61.2 bits (147), Expect = 4e-09, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 28/213 (13%)
Query: 752 IGAGSFGSVYKATLPYG-------MNVAIKVFNLQLDGAIKS-FDAECEVLRRVRHRNLV 803
+G FG VYK L +G VAIK + +G ++ F E + R++H N+V
Sbjct: 34 LGEDRFGKVYKGHL-FGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 92
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSH---------------KYTLNIQQRLDIMI 848
++ + ++I Y G L ++L K L + ++
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 849 DVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLA 907
+A+ +EYL H V+H DL NVL+ D +SD G+ + + D +L
Sbjct: 153 QIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 209
Query: 908 TFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+MAPE G S D++S+G+++ E F+
Sbjct: 210 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
Score = 59.3 bits (142), Expect = 2e-08, Method: Composition-based stats.
Identities = 70/312 (22%), Positives = 127/312 (40%), Gaps = 48/312 (15%)
Query: 1323 RRISYQELRLATNGFSESNLLGTGIFSSVYKATF-----ADGTNA-AIKIFSLQEDRALK 1376
++ +E+ L+ F E LG F VYK + T A AIK + + L+
Sbjct: 16 KQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR 73
Query: 1377 S-FDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRL 1435
F E + R++H N+ ++ + ++I Y G L ++L + ++
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 1436 D---------------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFG 1480
D ++ +A +EYL S ++H DL NVL+ D + + D G
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLG 190
Query: 1481 IAKLLDGVDSMKQT-MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDM 1539
+ + + D K +L I +MAPE G S D++S+G+++ E +
Sbjct: 191 LFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS-------- 242
Query: 1540 FTGEVCLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEE 1599
L+ + S D V + + +L ++ C + V +L ++C E P
Sbjct: 243 ----YGLQPYCGYSNQDVVEMIRNRQVLPCPDD--------CPAWVYALMIECWNEFPSR 290
Query: 1600 RMNVKDALANLK 1611
R KD + L+
Sbjct: 291 RPRFKDIHSRLR 302
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 61.2 bits (147), Expect = 4e-09, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 28/213 (13%)
Query: 752 IGAGSFGSVYKATLPYG-------MNVAIKVFNLQLDGAIKS-FDAECEVLRRVRHRNLV 803
+G FG VYK L +G VAIK + +G ++ F E + R++H N+V
Sbjct: 17 LGEDRFGKVYKGHL-FGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSH---------------KYTLNIQQRLDIMI 848
++ + ++I Y G L ++L K L + ++
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 849 DVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT-MTLA 907
+A+ +EYL H V+H DL NVL+ D +SD G+ + + D +L
Sbjct: 136 QIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 192
Query: 908 TFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+MAPE G S D++S+G+++ E F+
Sbjct: 193 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
Score = 59.3 bits (142), Expect = 2e-08, Method: Composition-based stats.
Identities = 70/307 (22%), Positives = 125/307 (40%), Gaps = 48/307 (15%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATF-----ADGTNA-AIKIFSLQEDRALKS-FDA 1380
+E+ L+ F E LG F VYK + T A AIK + + L+ F
Sbjct: 4 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 61
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLD---- 1436
E + R++H N+ ++ + ++I Y G L ++L + ++ D
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 121
Query: 1437 -----------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL 1485
++ +A +EYL S ++H DL NVL+ D + + D G+ + +
Sbjct: 122 KSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREV 178
Query: 1486 DGVDSMKQT-MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEV 1544
D K +L I +MAPE G S D++S+G+++ E +
Sbjct: 179 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS------------Y 226
Query: 1545 CLKHWVEESLPDAVTDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVK 1604
L+ + S D V + + +L ++ C + V +L ++C E P R K
Sbjct: 227 GLQPYCGYSNQDVVEMIRNRQVLPCPDD--------CPAWVYALMIECWNEFPSRRPRFK 278
Query: 1605 DALANLK 1611
D + L+
Sbjct: 279 DIHSRLR 285
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 34/217 (15%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQ---------EDRALKSFDAECEVMRRIRHR- 1391
LG G F V +A F A + +++ E RAL S E +++ I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKILIHIGHHL 82
Query: 1392 NLAKIVSSCSNPGFKALIL-QYMPQGSLEKWLYS---------------HNYLLNIEQRL 1435
N+ ++ +C+ PG +++ ++ G+L +L S + L +E +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDSMKQT 1494
VA +E+L S IH DL N+LL + V + DFG+A+ + D +++
Sbjct: 143 CYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 1495 MTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
+ +MAPE + + + DV+SFG+L+ E +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 752 IGAGSFGSVYKATLPYGMN-------VAIKVFNLQLDGAI----KSFDAECEVLRRVRHR 800
+G G+FG V +A +G++ VA+K+ +GA ++ +E ++L + H
Sbjct: 26 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHH 81
Query: 801 -NLVKIISSCSNHGFKALIL-EYMPQGSLEKWLYS---------------HKYTLNIQQR 843
N+V ++ +C+ G +++ E+ G+L +L S +K L ++
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 844 LDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQ 902
+ VA +E+L IH DL N+LL + V + DFG+++ + D V +
Sbjct: 142 ICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 903 TMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+MAPE + + + DV+SFG+L+ E F+
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 61.2 bits (147), Expect = 4e-09, Method: Composition-based stats.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 48/227 (21%)
Query: 752 IGAGSFGSVYKAT----LPYG--MNVAIKVFNLQLDGAIKS-FDAECEVLRRVRHRNLVK 804
IG G+FG V++A LPY VA+K+ + +++ F E ++ + N+VK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYS---HKYT--------------------LNIQ 841
++ C+ L+ EYM G L ++L S H L+
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 842 QRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL------- 894
++L I VA+ + YL +H DL N L+ ++ V ++DFG+S+ +
Sbjct: 175 EQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 895 -DGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
DG D++ +M PE +T DV+++G+++ E F+
Sbjct: 232 ADGNDAI-------PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 34/220 (15%)
Query: 1343 LGTGIFSSVYKA------TFADGTNAAIKIFSLQEDRALKS-FDAECEVMRRIRHRNLAK 1395
+G G F V++A + T A+K+ + +++ F E +M + N+ K
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWL----------YSHNYL-------------LNIE 1432
++ C+ L+ +YM G L ++L SH+ L L+
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 1433 QRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492
++L I VA + YL + +H DL N L+ ++MV + DFG+++ + D K
Sbjct: 175 EQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 1493 QTMTLAT-IGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
A I +M PE +T DV+++G+++ E +
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 741 RLTDGFSESNLIGAGSFG----SVYKATLPYGMNVAIKVFNLQLDGA--IKSFDAECEVL 794
+ +D + +G G+F V+K T G+ A K+ N + A + + E +
Sbjct: 26 KFSDNYDVKEELGKGAFSVVRRCVHKTT---GLEFAAKIINTKKLSARDFQKLEREARIC 82
Query: 795 RRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASAL 854
R+++H N+V++ S F L+ + + G L + + + ++ D + L
Sbjct: 83 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY----SEADASHCIQQIL 138
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDDD---TVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
E + + H ++H +LKP N+LL L+DFG++ ++ DS T GY
Sbjct: 139 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGY 196
Query: 912 MAPEYGSEGIVSTCGDVYSFGILM 935
++PE + S D+++ G+++
Sbjct: 197 LSPEVLKKDPYSKPVDIWACGVIL 220
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 12/199 (6%)
Query: 1334 TNGFSESNLLGTGIFSSVYKATF-ADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRH 1390
++ + LG G FS V + G A KI + ++ R + + E + R+++H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQ 1450
N+ ++ S F L+ + G L + + + + D + LE +
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY----SEADASHCIQQILESIAY 143
Query: 1451 GYSTSIIHCDLKPSNVLLDDD---MVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
+S I+H +LKP N+LL L DFG+A ++ DS T GY++PE
Sbjct: 144 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEV 201
Query: 1508 GSEGIVSTSGDVYSFGILM 1526
+ S D+++ G+++
Sbjct: 202 LKKDPYSKPVDIWACGVIL 220
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKV---FNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG GS+G K + + + + + +E +LR ++H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 809 CSNHGFKAL--ILEYMPQGSLEKWLYS---HKYTLNIQQRLDIMIDVASALEYLHH---- 859
+ L ++EY G L + + L+ + L +M + AL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
GH V+H DLKP+NV LD L DFG++++L+ + S +T + T YM+PE +
Sbjct: 134 GHT--VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF-VGTPYYMSPEQMNR 190
Query: 920 GIVSTCGDVYSFGILMIE 937
+ D++S G L+ E
Sbjct: 191 MSYNEKSDIWSLGCLLYE 208
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 1380 AECEVMRRIRHRNLAKIVSSCSNPGFKAL--ILQYMPQGSLE----KWLYSHNYLLNIEQ 1433
+E ++R ++H N+ + + L +++Y G L K YL + E
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL-DEEF 112
Query: 1434 RLDIMIDVACALEYLHQGYS--TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491
L +M + AL+ H+ +++H DLKP+NV LD LGDFG+A++L+ S
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF 172
Query: 1492 KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMME 1528
+T + T YM+PE + + D++S G L+ E
Sbjct: 173 AKTF-VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 11/242 (4%)
Query: 1342 LLGTGIFSSVYKATFADGTNA-AIKIFS---LQEDRALKSFDAECEVMRRIRHRNLAKIV 1397
LG G F+ ++ + AD A KI L + + E + R + H+++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 1398 SSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSII 1457
+ F ++L+ + SL + L E R + + +YLH+ +I
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RVI 137
Query: 1458 HCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSG 1517
H DLK N+ L++D+ +GDFG+A ++ D ++ + T Y+APE S+ S
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKVLCGTPNYIAPEVLSKKGHSFEV 196
Query: 1518 DVYSFGILMMETLTRRKPTDDMFTGEVCLK-HWVEESLPDAVTDVIDANLLSGEEEADIA 1576
DV+S G +M L + P + E L+ E S+P + V A+L+ + D
Sbjct: 197 DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQKMLQTDPT 255
Query: 1577 AK 1578
A+
Sbjct: 256 AR 257
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 5/167 (2%)
Query: 790 ECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMID 849
E + R + H+++V ++ F ++LE + SL + L+ + L + +
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 123
Query: 850 VASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF 909
+ +YLH VIH DLK N+ L++D + DFG++ ++ D + + T
Sbjct: 124 IVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKVLCGTP 179
Query: 910 GYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLK 956
Y+APE S+ S DV+S G +M K P + ET L+
Sbjct: 180 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR 226
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 31/218 (14%)
Query: 749 SNLIGAGSFGSVYKATLPY-GMNVAIKVFN-----LQLDGAIKSFDAECEVLRRVRHRNL 802
S+++G G+ +V++ G AIKVFN +D ++ F EVL+++ H+N+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREF----EVLKKLNHKNI 69
Query: 803 VKI--ISSCSNHGFKALILEYMPQGSLEKWLY--SHKYTLNIQQRLDIMIDVASALEYLH 858
VK+ I + K LI+E+ P GSL L S+ Y L + L ++ DV + +L
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 859 HGHPTPVIHCDLKPSNVLL----DDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAP 914
++H ++KP N++ D +V L+DFG ++ L ED T Y+ P
Sbjct: 130 E---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL--EDDEQFVSLYGTEEYLHP 184
Query: 915 EYGSEGIV--------STCGDVYSFGILMIETFTRKMP 944
+ ++ D++S G+ T +P
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 1340 SNLLGTGIFSSVYKATFAD-GTNAAIKIFS-LQEDRALKSFDAECEVMRRIRHRNLAKI- 1396
S++LG G ++V++ G AIK+F+ + R + E EV++++ H+N+ K+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 1397 -VSSCSNPGFKALILQYMPQGSLEKWLY--SHNYLLNIEQRLDIMIDVACALEYLHQGYS 1453
+ + K LI+++ P GSL L S+ Y L + L ++ DV + +L +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE--- 130
Query: 1454 TSIIHCDLKPSNVLL----DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGS 1509
I+H ++KP N++ D V L DFG A+ L+ D + T Y+ P
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE--DDEQFVSLYGTEEYLHP---- 184
Query: 1510 EGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLP 1555
D+Y +L + + T D+++ V H SLP
Sbjct: 185 --------DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 60.5 bits (145), Expect = 7e-09, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQ-LDGAIKSFDAECEVLRRVRHRN 801
D + +IG+G+ V A P VAIK NL+ ++ E + + + H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 802 LVKIISSCSNHGFKALILEYMPQGSLEKWLY------SHKY-TLNIQQRLDIMIDVASAL 854
+V +S L+++ + GS+ + HK L+ I+ +V L
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF----G 910
EYLH IH D+K N+LL +D ++DFG+S L +T+ TF
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 911 YMAPEYGSE-GIVSTCGDVYSFGILMIETFTRKMP 944
+MAPE + D++SFGI IE T P
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 66/282 (23%), Positives = 116/282 (41%), Gaps = 33/282 (11%)
Query: 1342 LLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRNLAKIVS 1398
++G+G ++V +A + + I + ++ S D E + M + H N+ +
Sbjct: 17 VIGSGA-TAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSH--------NYLLNIEQRLDIMIDVACALEYLHQ 1450
S L+++ + GS+ + H + +L+ I+ +V LEYLH+
Sbjct: 76 SFVVKDELWLVMKLLSGGSVLD-IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 134
Query: 1451 GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL-DGVDSMKQTMTLATIG---YMAPE 1506
IH D+K N+LL +D + DFG++ L G D + + +G +MAPE
Sbjct: 135 ---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 191
Query: 1507 YGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDAN 1565
+ D++SFGI +E T P +V L ++ P T V D
Sbjct: 192 VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-LMLTLQNDPPSLETGVQDKE 250
Query: 1566 LLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDAL 1607
+L KK S + C ++ PE+R + L
Sbjct: 251 ML-----------KKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 60.5 bits (145), Expect = 7e-09, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQ-LDGAIKSFDAECEVLRRVRHRN 801
D + +IG+G+ V A P VAIK NL+ ++ E + + + H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 802 LVKIISSCSNHGFKALILEYMPQGSLEKWLY------SHKY-TLNIQQRLDIMIDVASAL 854
+V +S L+++ + GS+ + HK L+ I+ +V L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF----G 910
EYLH IH D+K N+LL +D ++DFG+S L +T+ TF
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 911 YMAPEYGSE-GIVSTCGDVYSFGILMIETFTRKMP 944
+MAPE + D++SFGI IE T P
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 71/298 (23%), Positives = 125/298 (41%), Gaps = 36/298 (12%)
Query: 1342 LLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRNLAKIVS 1398
++G+G ++V +A + + I + ++ S D E + M + H N+ +
Sbjct: 22 VIGSGA-TAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSH--------NYLLNIEQRLDIMIDVACALEYLHQ 1450
S L+++ + GS+ + H + +L+ I+ +V LEYLH+
Sbjct: 81 SFVVKDELWLVMKLLSGGSVLD-IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 139
Query: 1451 GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL-DGVDSMKQTMTLATIG---YMAPE 1506
IH D+K N+LL +D + DFG++ L G D + + +G +MAPE
Sbjct: 140 ---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 196
Query: 1507 YGSE-GIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDAN 1565
+ D++SFGI +E T P +V L ++ P T V D
Sbjct: 197 VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-LMLTLQNDPPSLETGVQDKE 255
Query: 1566 LLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN--LKKIKTK-FLKD 1620
+L KK S + C ++ PE+R + L + +K K K FL++
Sbjct: 256 ML-----------KKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFLQE 302
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 113/232 (48%), Gaps = 27/232 (11%)
Query: 742 LTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFN---------LQLDGAIKSFDAEC 791
L D + S +G+G+ G V A VAIK+ + + D A+ + + E
Sbjct: 7 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEI 65
Query: 792 EVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVA 851
E+L+++ H ++KI + + ++LE M G L + +K +L +
Sbjct: 66 EILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQML 123
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLL---DDDTVAHLSDFGISKLLDGEDSVTQTMTLAT 908
A++YLH +IH DLKP NVLL ++D + ++DFG SK+L GE S+ +T+ T
Sbjct: 124 LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLC-GT 178
Query: 909 FGYMAPE----YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLK 956
Y+APE G+ G + D +S G+++ + P E T + SLK
Sbjct: 179 PTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLK 228
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 37/238 (15%)
Query: 1340 SNLLGTGIFSSVYKATFADGT--NAAIKIFSLQE---------DRALKSFDAECEVMRRI 1388
S LG+G V K F T AIKI S ++ D AL + + E E+++++
Sbjct: 14 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEIEILKKL 71
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYL 1448
H + KI + + ++L+ M G L + + L +L + A++YL
Sbjct: 72 NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAVQYL 129
Query: 1449 HQGYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
H+ IIH DLKP NVLL ++D + + DFG +K+L G S+ +T+ T Y+AP
Sbjct: 130 HEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLC-GTPTYLAP 184
Query: 1506 E----YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVT 1559
E G+ G + + D +S G+++ L+ P + H + SL D +T
Sbjct: 185 EVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSE---------HRTQVSLKDQIT 232
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 113/232 (48%), Gaps = 27/232 (11%)
Query: 742 LTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFN---------LQLDGAIKSFDAEC 791
L D + S +G+G+ G V A VAIK+ + + D A+ + + E
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEI 66
Query: 792 EVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVA 851
E+L+++ H ++KI + + ++LE M G L + +K +L +
Sbjct: 67 EILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQML 124
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLL---DDDTVAHLSDFGISKLLDGEDSVTQTMTLAT 908
A++YLH +IH DLKP NVLL ++D + ++DFG SK+L GE S+ +T+ T
Sbjct: 125 LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLC-GT 179
Query: 909 FGYMAPE----YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLK 956
Y+APE G+ G + D +S G+++ + P E T + SLK
Sbjct: 180 PTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLK 229
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 37/238 (15%)
Query: 1340 SNLLGTGIFSSVYKATFADGT--NAAIKIFSLQE---------DRALKSFDAECEVMRRI 1388
S LG+G V K F T AIKI S ++ D AL + + E E+++++
Sbjct: 15 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEIEILKKL 72
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYL 1448
H + KI + + ++L+ M G L + + L +L + A++YL
Sbjct: 73 NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAVQYL 130
Query: 1449 HQGYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
H+ IIH DLKP NVLL ++D + + DFG +K+L G S+ +T+ T Y+AP
Sbjct: 131 HEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLC-GTPTYLAP 185
Query: 1506 E----YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVT 1559
E G+ G + + D +S G+++ L+ P + H + SL D +T
Sbjct: 186 EVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSE---------HRTQVSLKDQIT 233
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In
Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16 In
Complex With Staurosporine
Length = 317
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 99/220 (45%), Gaps = 28/220 (12%)
Query: 1343 LGTGIFSSV-YKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSC- 1400
LG G FS V DG A+K E + + E ++ R H N+ ++V+ C
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 1401 SNPGFKA---LILQYMPQGSLEKW-----LYSHNYLLNIEQRLDIMIDVACALEYLH-QG 1451
G K L+L + +G+L W L L +Q L +++ + LE +H +G
Sbjct: 97 RERGAKHEAWLLLPFFKRGTL--WNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG 154
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFG-IAKLLDGVDSMKQTMTL-------ATIGYM 1503
Y+ H DLKP+N+LL D+ L D G + + V+ +Q +TL TI Y
Sbjct: 155 YA----HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYR 210
Query: 1504 APE---YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMF 1540
APE S ++ DV+S G ++ + P D +F
Sbjct: 211 APELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVF 250
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 21/192 (10%)
Query: 790 ECEVLRRVRHRNLVKIISSC-SNHGFKA---LILEYMPQGSLEKWLYSHKYTLNI---QQ 842
E ++ R H N++++++ C G K L+L + +G+L + K N Q
Sbjct: 76 EADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQ 135
Query: 843 RLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFG-ISKLLDGEDSVT 901
L +++ + LE +H H DLKP+N+LL D+ L D G +++ +
Sbjct: 136 ILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSR 192
Query: 902 QTMTL-------ATFGYMAPE---YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTG 951
Q +TL T Y APE S ++ DV+S G ++ + P D +F
Sbjct: 193 QALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK 252
Query: 952 ETSLKKWVEESL 963
S+ V+ L
Sbjct: 253 GDSVALAVQNQL 264
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 113/232 (48%), Gaps = 27/232 (11%)
Query: 742 LTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFN---------LQLDGAIKSFDAEC 791
L D + S +G+G+ G V A VAIK+ + + D A+ + + E
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEI 66
Query: 792 EVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVA 851
E+L+++ H ++KI + + ++LE M G L + +K +L +
Sbjct: 67 EILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQML 124
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLL---DDDTVAHLSDFGISKLLDGEDSVTQTMTLAT 908
A++YLH +IH DLKP NVLL ++D + ++DFG SK+L GE S+ +T+ T
Sbjct: 125 LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLC-GT 179
Query: 909 FGYMAPE----YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLK 956
Y+APE G+ G + D +S G+++ + P E T + SLK
Sbjct: 180 PTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLK 229
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 37/238 (15%)
Query: 1340 SNLLGTGIFSSVYKATFADGT--NAAIKIFSLQE---------DRALKSFDAECEVMRRI 1388
S LG+G V K F T AIKI S ++ D AL + + E E+++++
Sbjct: 15 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEIEILKKL 72
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYL 1448
H + KI + + ++L+ M G L + + L +L + A++YL
Sbjct: 73 NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAVQYL 130
Query: 1449 HQGYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
H+ IIH DLKP NVLL ++D + + DFG +K+L G S+ +T+ T Y+AP
Sbjct: 131 HEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLC-GTPTYLAP 185
Query: 1506 E----YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVT 1559
E G+ G + + D +S G+++ L+ P + H + SL D +T
Sbjct: 186 EVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSE---------HRTQVSLKDQIT 233
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 113/232 (48%), Gaps = 27/232 (11%)
Query: 742 LTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFN---------LQLDGAIKSFDAEC 791
L D + S +G+G+ G V A VAIK+ + + D A+ + + E
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEI 66
Query: 792 EVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVA 851
E+L+++ H ++KI + + ++LE M G L + +K +L +
Sbjct: 67 EILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQML 124
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLL---DDDTVAHLSDFGISKLLDGEDSVTQTMTLAT 908
A++YLH +IH DLKP NVLL ++D + ++DFG SK+L GE S+ +T+ T
Sbjct: 125 LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLC-GT 179
Query: 909 FGYMAPE----YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLK 956
Y+APE G+ G + D +S G+++ + P E T + SLK
Sbjct: 180 PTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLK 229
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 37/238 (15%)
Query: 1340 SNLLGTGIFSSVYKATFADGT--NAAIKIFSLQE---------DRALKSFDAECEVMRRI 1388
S LG+G V K F T AIKI S ++ D AL + + E E+++++
Sbjct: 15 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEIEILKKL 72
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYL 1448
H + KI + + ++L+ M G L + + L +L + A++YL
Sbjct: 73 NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAVQYL 130
Query: 1449 HQGYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
H+ IIH DLKP NVLL ++D + + DFG +K+L G S+ +T+ T Y+AP
Sbjct: 131 HEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLC-GTPTYLAP 185
Query: 1506 E----YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVT 1559
E G+ G + + D +S G+++ L+ P + H + SL D +T
Sbjct: 186 EVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSE---------HRTQVSLKDQIT 233
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 744 DGFSESNLIGAGSFGSV--YKATLPYGMNVAIKVFNLQL---DGAIKSFDAECEVLRRVR 798
D F IG GSFG V + M A+K N Q +++ E ++++ +
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKM-YAMKYMNKQKCVERNEVRNVFKELQIMQGLE 73
Query: 799 HRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH 858
H LV + S + ++++ + G L L + + +L + ++ AL+YL
Sbjct: 74 HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-FICELVMALDYLQ 132
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLA-TFGYMAPEYG 917
+ +IH D+KP N+LLD+ H++DF I+ +L E TQ T+A T YMAPE
Sbjct: 133 NQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE---TQITTMAGTKPYMAPEMF 186
Query: 918 SEGIVSTCGDVYSFGI 933
S S G YSF +
Sbjct: 187 S----SRKGAGYSFAV 198
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQ---EDRALKSFDAECEVMRRIRHRNLAKIVS 1398
+G G F V D A+K + Q E +++ E ++M+ + H L +
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIH 1458
S + +++ + G L ++ N E + ++ AL+YL + IIH
Sbjct: 83 SFQDEEDMFMVVDLLLGGDL-RYHLQQNVHFKEETVKLFICELVMALDYLQ---NQRIIH 138
Query: 1459 CDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA-TIGYMAPEYGSE---GIVS 1514
D+KP N+LLD+ H+ DF IA +L Q T+A T YMAPE S S
Sbjct: 139 RDMKPDNILLDEHGHVHITDFNIAAML---PRETQITTMAGTKPYMAPEMFSSRKGAGYS 195
Query: 1515 TSGDVYSFGILMMETLTRRKP 1535
+ D +S G+ E L R+P
Sbjct: 196 FAVDWWSLGVTAYELLRGRRP 216
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 113/232 (48%), Gaps = 27/232 (11%)
Query: 742 LTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFN---------LQLDGAIKSFDAEC 791
L D + S +G+G+ G V A VAIK+ + + D A+ + + E
Sbjct: 14 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEI 72
Query: 792 EVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVA 851
E+L+++ H ++KI + + ++LE M G L + +K +L +
Sbjct: 73 EILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQML 130
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLL---DDDTVAHLSDFGISKLLDGEDSVTQTMTLAT 908
A++YLH +IH DLKP NVLL ++D + ++DFG SK+L GE S+ +T+ T
Sbjct: 131 LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLC-GT 185
Query: 909 FGYMAPE----YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLK 956
Y+APE G+ G + D +S G+++ + P E T + SLK
Sbjct: 186 PTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLK 235
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 37/238 (15%)
Query: 1340 SNLLGTGIFSSVYKATFADGT--NAAIKIFSLQE---------DRALKSFDAECEVMRRI 1388
S LG+G V K F T AIKI S ++ D AL + + E E+++++
Sbjct: 21 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEIEILKKL 78
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYL 1448
H + KI + + ++L+ M G L + + L +L + A++YL
Sbjct: 79 NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAVQYL 136
Query: 1449 HQGYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
H+ IIH DLKP NVLL ++D + + DFG +K+L G S+ +T+ T Y+AP
Sbjct: 137 HE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLC-GTPTYLAP 191
Query: 1506 E----YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVT 1559
E G+ G + + D +S G+++ L+ P + H + SL D +T
Sbjct: 192 EVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSE---------HRTQVSLKDQIT 239
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 60.1 bits (144), Expect = 9e-09, Method: Composition-based stats.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 21/206 (10%)
Query: 755 GSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHG 813
G FG VYKA + A KV + + + ++ + E ++L H N+VK++ +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 814 FKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPS 873
+++E+ G+++ + + L Q I + L+ L++ H +IH DLK
Sbjct: 81 NLWILIEFCAGGAVDAVMLELERPLTESQ---IQVVCKQTLDALNYLHDNKIIHRDLKAG 137
Query: 874 NVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTC-------- 925
N+L D L+DFG+S + + T +MAPE V C
Sbjct: 138 NILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPE------VVMCETSKDRPY 191
Query: 926 ---GDVYSFGILMIETFTRKMPTDEM 948
DV+S GI +IE + P E+
Sbjct: 192 DYKADVWSLGITLIEMAEIEPPHHEL 217
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 21/214 (9%)
Query: 1346 GIFSSVYKATFADGTN-AAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPG 1404
G F VYKA + + AA K+ + + L+ + E +++ H N+ K++ +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 1405 FKALILQYMPQGSLEKWLYSHNYLLNIEQRL-DIMIDVAC-----ALEYLHQGYSTSIIH 1458
+++++ G+++ +L +E+ L + I V C AL YLH IIH
Sbjct: 81 NLWILIEFCAGGAVDA------VMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIH 131
Query: 1459 CDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY-----GSEGIV 1513
DLK N+L D L DFG++ ++ + T +MAPE +
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 191
Query: 1514 STSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK 1547
DV+S GI ++E P ++ V LK
Sbjct: 192 DYKADVWSLGITLIEMAEIEPPHHELNPMRVLLK 225
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 36/221 (16%)
Query: 752 IGAGSFGSVYKATLPYGM-------NVAIKVFNLQLDGAIK-SFDAECEVLRRV-RHRNL 802
+GAG+FG V +AT +G+ VA+K+ K + +E +++ + +H N+
Sbjct: 39 LGAGAFGKVVEAT-AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 97
Query: 803 VKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYT----------------------LNI 840
V ++ +C++ G +I EY G L +L L +
Sbjct: 98 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLEL 157
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDS 899
+ L VA + +L + IH D+ NVLL + VA + DFG+++ +++ +
Sbjct: 158 RDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 214
Query: 900 VTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+ + +MAPE + + + DV+S+GIL+ E F+
Sbjct: 215 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 99/235 (42%), Gaps = 34/235 (14%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKAT-FADGTNAAIKIFSLQEDRALKSFDAECEVMR 1386
++ N LG G F V +AT F G A+ +++ ++ D + +M
Sbjct: 24 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 83
Query: 1387 RIR-------HRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLY---------------- 1423
++ H N+ ++ +C++ G +I +Y G L +L
Sbjct: 84 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQD 143
Query: 1424 ------SHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLG 1477
L + L VA + +L S + IH D+ NVLL + VA +G
Sbjct: 144 PEGLDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIG 200
Query: 1478 DFGIAK-LLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
DFG+A+ +++ + + + + +MAPE + + + DV+S+GIL+ E +
Sbjct: 201 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 18/208 (8%)
Query: 746 FSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
+++ IG G++G V A VAIK + + + E ++L R RH N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLD-----IMIDVASALEYLH 858
I +A+ Y+ Q +E LY L QQ + + + L+Y+H
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYK---LLKSQQLSNDHICYFLYQILRGLKYIH 161
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPEY 916
+ V+H DLKPSN+L++ + DFG++++ D E T +T +AT Y APE
Sbjct: 162 SAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI 218
Query: 917 --GSEGIVSTCGDVYSFGILMIETFTRK 942
S+G + D++S G ++ E + +
Sbjct: 219 MLNSKGYTKSI-DIWSVGCILAEMLSNR 245
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 34/231 (14%)
Query: 1337 FSESNLLGTGIFSSVYKA-TFADGTNAAIKIFSLQE-----DRALKSFDAECEVMRRIRH 1390
+++ +G G + V A T AIK S E R L+ E +++ R RH
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR----EIQILLRFRH 100
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLD-----IMIDVACAL 1445
N+ I +A+ Y+ Q +E LY LL +Q + + + L
Sbjct: 101 ENVIGIRDILRASTLEAMRDVYIVQDLMETDLYK---LLKSQQLSNDHICYFLYQILRGL 157
Query: 1446 EYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT--LATIGYM 1503
+Y+H S +++H DLKPSN+L++ + DFG+A++ D +T +AT Y
Sbjct: 158 KYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYR 214
Query: 1504 APEY--GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 215 APEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 256
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 60.1 bits (144), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Query: 752 IGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
IG GS G V AT+ G VA+K +L+ + E ++R +H N+V++ +S
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 811 NHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+++E++ G+L + +H +N +Q + + V AL LH VIH D+
Sbjct: 219 VGDELWVVMEFLEGGALTD-IVTHT-RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 273
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
K ++LL D LSDFG + E + + + T +MAPE S D++S
Sbjct: 274 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEVDIWS 332
Query: 931 FGILMIETFTRKMP 944
GI++IE + P
Sbjct: 333 LGIMVIEMVDGEPP 346
Score = 54.7 bits (130), Expect = 4e-07, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 17/224 (7%)
Query: 1323 RRISYQELRLATN-----GFSESNL-----LGTGIFSSVYKATF-ADGTNAAIKIFSLQE 1371
+R+S+++ R A G S L +G G V AT + G A+K L++
Sbjct: 129 QRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK 188
Query: 1372 DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNI 1431
+ + E +MR +H N+ ++ +S ++++++ G+L + +H + N
Sbjct: 189 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRM-NE 246
Query: 1432 EQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491
EQ + + V AL LH + +IH D+K ++LL D L DFG + +
Sbjct: 247 EQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVP 302
Query: 1492 KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
++ + T +MAPE S D++S GI+++E + P
Sbjct: 303 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 60.1 bits (144), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Query: 752 IGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
IG GS G V AT+ G VA+K +L+ + E ++R +H N+V++ +S
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 811 NHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+++E++ G+L + +H +N +Q + + V AL LH VIH D+
Sbjct: 88 VGDELWVVMEFLEGGALTD-IVTHT-RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 142
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
K ++LL D LSDFG + E + + + T +MAPE S D++S
Sbjct: 143 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEVDIWS 201
Query: 931 FGILMIETFTRKMP 944
GI++IE + P
Sbjct: 202 LGIMVIEMVDGEPP 215
Score = 53.5 bits (127), Expect = 9e-07, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 6/179 (3%)
Query: 1357 ADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQG 1416
+ G A+K L++ + + E +MR +H N+ ++ +S ++++++ G
Sbjct: 43 SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 102
Query: 1417 SLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHL 1476
+L + +H + N EQ + + V AL LH + +IH D+K ++LL D L
Sbjct: 103 ALTD-IVTHTRM-NEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKL 157
Query: 1477 GDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
DFG + + ++ + T +MAPE S D++S GI+++E + P
Sbjct: 158 SDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 60.1 bits (144), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Query: 752 IGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
IG GS G V AT+ G VA+K +L+ + E ++R +H N+V++ +S
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 811 NHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+++E++ G+L + +H +N +Q + + V AL LH VIH D+
Sbjct: 92 VGDELWVVMEFLEGGALTD-IVTHT-RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 146
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
K ++LL D LSDFG + E + + + T +MAPE S D++S
Sbjct: 147 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEVDIWS 205
Query: 931 FGILMIETFTRKMP 944
GI++IE + P
Sbjct: 206 LGIMVIEMVDGEPP 219
Score = 53.5 bits (127), Expect = 9e-07, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 6/179 (3%)
Query: 1357 ADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQG 1416
+ G A+K L++ + + E +MR +H N+ ++ +S ++++++ G
Sbjct: 47 SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 106
Query: 1417 SLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHL 1476
+L + +H + N EQ + + V AL LH + +IH D+K ++LL D L
Sbjct: 107 ALTD-IVTHTRM-NEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKL 161
Query: 1477 GDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
DFG + + ++ + T +MAPE S D++S GI+++E + P
Sbjct: 162 SDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 60.1 bits (144), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Query: 752 IGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
IG GS G V AT+ G VA+K +L+ + E ++R +H N+V++ +S
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 811 NHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+++E++ G+L + +H +N +Q + + V AL LH VIH D+
Sbjct: 97 VGDELWVVMEFLEGGALTD-IVTHT-RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 151
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
K ++LL D LSDFG + E + + + T +MAPE S D++S
Sbjct: 152 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEVDIWS 210
Query: 931 FGILMIETFTRKMP 944
GI++IE + P
Sbjct: 211 LGIMVIEMVDGEPP 224
Score = 54.7 bits (130), Expect = 4e-07, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 17/224 (7%)
Query: 1323 RRISYQELRLATN-----GFSESNL-----LGTGIFSSVYKATF-ADGTNAAIKIFSLQE 1371
+R+S+++ R A G S L +G G V AT + G A+K L++
Sbjct: 7 QRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK 66
Query: 1372 DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNI 1431
+ + E +MR +H N+ ++ +S ++++++ G+L + +H + N
Sbjct: 67 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRM-NE 124
Query: 1432 EQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491
EQ + + V AL LH + +IH D+K ++LL D L DFG + +
Sbjct: 125 EQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVP 180
Query: 1492 KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
++ + T +MAPE S D++S GI+++E + P
Sbjct: 181 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 60.1 bits (144), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Query: 752 IGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
IG GS G V AT+ G VA+K +L+ + E ++R +H N+V++ +S
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 811 NHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+++E++ G+L + +H +N +Q + + V AL LH VIH D+
Sbjct: 99 VGDELWVVMEFLEGGALTD-IVTHT-RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 153
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
K ++LL D LSDFG + E + + + T +MAPE S D++S
Sbjct: 154 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEVDIWS 212
Query: 931 FGILMIETFTRKMP 944
GI++IE + P
Sbjct: 213 LGIMVIEMVDGEPP 226
Score = 54.7 bits (130), Expect = 4e-07, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 17/224 (7%)
Query: 1323 RRISYQELRLATN-----GFSESNL-----LGTGIFSSVYKATF-ADGTNAAIKIFSLQE 1371
+R+S+++ R A G S L +G G V AT + G A+K L++
Sbjct: 9 QRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK 68
Query: 1372 DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNI 1431
+ + E +MR +H N+ ++ +S ++++++ G+L + +H + N
Sbjct: 69 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRM-NE 126
Query: 1432 EQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491
EQ + + V AL LH + +IH D+K ++LL D L DFG + +
Sbjct: 127 EQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVP 182
Query: 1492 KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
++ + T +MAPE S D++S GI+++E + P
Sbjct: 183 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 60.1 bits (144), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Query: 752 IGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
IG GS G V AT+ G VA+K +L+ + E ++R +H N+V++ +S
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 811 NHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+++E++ G+L + +H +N +Q + + V AL LH VIH D+
Sbjct: 142 VGDELWVVMEFLEGGALTD-IVTHT-RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 196
Query: 871 KPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYS 930
K ++LL D LSDFG + E + + + T +MAPE S D++S
Sbjct: 197 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEVDIWS 255
Query: 931 FGILMIETFTRKMP 944
GI++IE + P
Sbjct: 256 LGIMVIEMVDGEPP 269
Score = 54.7 bits (130), Expect = 4e-07, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 17/224 (7%)
Query: 1323 RRISYQELRLATN-----GFSESNL-----LGTGIFSSVYKATF-ADGTNAAIKIFSLQE 1371
+R+S+++ R A G S L +G G V AT + G A+K L++
Sbjct: 52 QRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK 111
Query: 1372 DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNI 1431
+ + E +MR +H N+ ++ +S ++++++ G+L + +H + N
Sbjct: 112 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRM-NE 169
Query: 1432 EQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491
EQ + + V AL LH + +IH D+K ++LL D L DFG + +
Sbjct: 170 EQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVP 225
Query: 1492 KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
++ + T +MAPE S D++S GI+++E + P
Sbjct: 226 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 741 RLTDGFSESNLIGAGSFG----SVYKATLPYGMNVAIKVFNLQLDGA--IKSFDAECEVL 794
+ +D + +G G+F V+K T G+ A K+ N + A + + E +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTT---GLEFAAKIINTKKLSARDFQKLEREARIC 59
Query: 795 RRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASAL 854
R+++H N+V++ S F L+ + + G L + + + ++ D + L
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQIL 115
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDDD---TVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
E + + H ++H +LKP N+LL L+DFG++ ++ DS T GY
Sbjct: 116 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGY 173
Query: 912 MAPEYGSEGIVSTCGDVYSFGILM 935
++PE + S D+++ G+++
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVIL 197
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 12/199 (6%)
Query: 1343 LGTGIFSSVYKATF-ADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSS 1399
LG G FS V + G A KI + ++ R + + E + R+++H N+ ++ S
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
F L+ + G L + + + + D + LE + +S I+H
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFY----SEADASHCIQQILESIAYCHSNGIVHR 129
Query: 1460 DLKPSNVLLDDD---MVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTS 1516
+LKP N+LL L DFG+A ++ DS T GY++PE + S
Sbjct: 130 NLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP 187
Query: 1517 GDVYSFGILMMETLTRRKP 1535
D+++ G+++ L P
Sbjct: 188 VDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 741 RLTDGFSESNLIGAGSFG----SVYKATLPYGMNVAIKVFNLQLDGA--IKSFDAECEVL 794
+ +D + +G G+F V+K T G+ A K+ N + A + + E +
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTT---GLEFAAKIINTKKLSARDFQKLEREARIC 58
Query: 795 RRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASAL 854
R+++H N+V++ S F L+ + + G L + + + ++ D + L
Sbjct: 59 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQIL 114
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDDD---TVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
E + + H ++H +LKP N+LL L+DFG++ ++ DS T GY
Sbjct: 115 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGY 172
Query: 912 MAPEYGSEGIVSTCGDVYSFGILM 935
++PE + S D+++ G+++
Sbjct: 173 LSPEVLKKDPYSKPVDIWACGVIL 196
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 12/199 (6%)
Query: 1343 LGTGIFSSVYKATF-ADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSS 1399
LG G FS V + G A KI + ++ R + + E + R+++H N+ ++ S
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
F L+ + G L + + + + D + LE + +S I+H
Sbjct: 73 IQEESFHYLVFDLVTGGELFEDIVAREFY----SEADASHCIQQILESIAYCHSNGIVHR 128
Query: 1460 DLKPSNVLLDDD---MVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTS 1516
+LKP N+LL L DFG+A ++ DS T GY++PE + S
Sbjct: 129 NLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP 186
Query: 1517 GDVYSFGILMMETLTRRKP 1535
D+++ G+++ L P
Sbjct: 187 VDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 741 RLTDGFSESNLIGAGSFG----SVYKATLPYGMNVAIKVFNLQLDGA--IKSFDAECEVL 794
+ +D + +G G+F V+K T G+ A K+ N + A + + E +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTT---GLEFAAKIINTKKLSARDFQKLEREARIC 59
Query: 795 RRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASAL 854
R+++H N+V++ S F L+ + + G L + + + ++ D + L
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQIL 115
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDDD---TVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
E + + H ++H +LKP N+LL L+DFG++ ++ DS T GY
Sbjct: 116 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGY 173
Query: 912 MAPEYGSEGIVSTCGDVYSFGILM 935
++PE + S D+++ G+++
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVIL 197
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 12/199 (6%)
Query: 1343 LGTGIFSSVYKATF-ADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSS 1399
LG G FS V + G A KI + ++ R + + E + R+++H N+ ++ S
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
F L+ + G L + + + + D + LE + +S I+H
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFY----SEADASHCIQQILESIAYCHSNGIVHR 129
Query: 1460 DLKPSNVLLDDD---MVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTS 1516
+LKP N+LL L DFG+A ++ DS T GY++PE + S
Sbjct: 130 NLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP 187
Query: 1517 GDVYSFGILMMETLTRRKP 1535
D+++ G+++ L P
Sbjct: 188 VDIWACGVILYILLVGYPP 206
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 92/212 (43%), Gaps = 42/212 (19%)
Query: 742 LTDGFSESNLIGAGSFGSVYKATL-----PYGMNVAIKVFNLQLDGAIKSFDAECEVLRR 796
L+D F + +G G+ VY+ PY A+KV +D I E VL R
Sbjct: 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPY----ALKVLKKTVDKKI--VRTEIGVLLR 104
Query: 797 VRHRNLVKIISSCSNHGFKALILEYMPQGSL-----EKWLYSHKYTLNIQQRLDIMIDVA 851
+ H N++K+ +L+LE + G L EK YS + D + +
Sbjct: 105 LSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSER------DAADAVKQIL 158
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDGEDSVTQTMTLAT 908
A+ YLH ++H DLKP N+L D ++DFG+SK++ E V T
Sbjct: 159 EAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMKTVCGT 213
Query: 909 FGYMAPE------YGSEGIVSTCGDVYSFGIL 934
GY APE YG E D++S GI+
Sbjct: 214 PGYCAPEILRGCAYGPE------VDMWSVGII 239
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 86/200 (43%), Gaps = 20/200 (10%)
Query: 1334 TNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNL 1393
++ F + LG G S VY+ GT + L++ K E V+ R+ H N+
Sbjct: 52 SDFFEVESELGRGATSIVYRCK-QKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNI 110
Query: 1394 AKIVSSCSNPGFKALILQYMPQGSL-----EKWLYSHNYLLNIEQRLDIMIDVACALEYL 1448
K+ P +L+L+ + G L EK YS D + + A+ YL
Sbjct: 111 IKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSER------DAADAVKQILEAVAYL 164
Query: 1449 HQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
H+ I+H DLKP N+L D + DFG++K+++ MK T GY AP
Sbjct: 165 HE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK--TVCGTPGYCAP 219
Query: 1506 EYGSEGIVSTSGDVYSFGIL 1525
E D++S GI+
Sbjct: 220 EILRGCAYGPEVDMWSVGII 239
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 59.3 bits (142), Expect = 2e-08, Method: Composition-based stats.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIKVFN-LQLDGA-IKSFDAECEVLRRVRHRNLVKIISS 808
IG G+F V A + G VA+K+ + QL+ + ++ E + + + H N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 809 CSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHC 868
L+ EY G + +L +H + R + SA++Y H ++H
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 869 DLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATF----GYMAPE-YGSEGIVS 923
DLK N+LLD D ++DFG S + T L F Y APE + +
Sbjct: 138 DLKAENLLLDADXNIKIADFGFS------NEFTFGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 924 TCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLR 964
DV+S G+++ + +P F G+ +LK+ E LR
Sbjct: 192 PEVDVWSLGVILYTLVSGSLP----FDGQ-NLKELRERVLR 227
Score = 53.9 bits (128), Expect = 7e-07, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 10/199 (5%)
Query: 1343 LGTGIFSSVYKAT-FADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G G F+ V A G A+KI + +L+ E + + + H N+ K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
L+ +Y G + +L +H E R + A++Y HQ + I+H
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE-YGSEGIVSTSGD 1518
DLK N+LLD D + DFG + + K Y APE + + D
Sbjct: 138 DLKAENLLLDADXNIKIADFGFSN--EFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVD 195
Query: 1519 VYSFGILMMETLTRRKPTD 1537
V+S G+++ ++ P D
Sbjct: 196 VWSLGVILYTLVSGSLPFD 214
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ R RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-- 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +T
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEY 187
Query: 1497 LATIGYMAPE--YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 188 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 236
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L R RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 144
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPE--YG 917
V+H DLKPSN+LL+ + DFG++++ D + T +T +AT Y APE
Sbjct: 145 ---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 202 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 236
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 27/232 (11%)
Query: 742 LTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFN---------LQLDGAIKSFDAEC 791
L D + S +G+G+ G V A VAI++ + + D A+ + + E
Sbjct: 147 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL-NVETEI 205
Query: 792 EVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVA 851
E+L+++ H ++KI + + ++LE M G L + +K +L +
Sbjct: 206 EILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQML 263
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLL---DDDTVAHLSDFGISKLLDGEDSVTQTMTLAT 908
A++YLH +IH DLKP NVLL ++D + ++DFG SK+L GE S+ +T+ T
Sbjct: 264 LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLC-GT 318
Query: 909 FGYMAPE----YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLK 956
Y+APE G+ G + D +S G+++ + P E T + SLK
Sbjct: 319 PTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLK 368
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 112/238 (47%), Gaps = 37/238 (15%)
Query: 1340 SNLLGTGIFSSVYKATFADGT--NAAIKIFSLQE---------DRALKSFDAECEVMRRI 1388
S LG+G V K F T AI+I S ++ D AL + + E E+++++
Sbjct: 154 SKTLGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPAL-NVETEIEILKKL 211
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYL 1448
H + KI + + ++L+ M G L + + L +L + A++YL
Sbjct: 212 NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAVQYL 269
Query: 1449 HQGYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
H+ IIH DLKP NVLL ++D + + DFG +K+L G S+ +T+ T Y+AP
Sbjct: 270 HEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLC-GTPTYLAP 324
Query: 1506 E----YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVT 1559
E G+ G + + D +S G+++ L+ P + H + SL D +T
Sbjct: 325 EVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSE---------HRTQVSLKDQIT 372
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKV---FNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG GS+G K + + + + + +E +LR ++H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 809 CSNHGFKAL--ILEYMPQGSLEKWLYS---HKYTLNIQQRLDIMIDVASALEYLHH---- 859
+ L ++EY G L + + L+ + L +M + AL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
GH V+H DLKP+NV LD L DFG++++L+ + S + + T YM+PE +
Sbjct: 134 GHT--VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAF-VGTPYYMSPEQMNR 190
Query: 920 GIVSTCGDVYSFGILMIE 937
+ D++S G L+ E
Sbjct: 191 MSYNEKSDIWSLGCLLYE 208
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 1380 AECEVMRRIRHRNLAKIVSSCSNPGFKAL--ILQYMPQGSLE----KWLYSHNYLLNIEQ 1433
+E ++R ++H N+ + + L +++Y G L K YL + E
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL-DEEF 112
Query: 1434 RLDIMIDVACALEYLHQGYS--TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491
L +M + AL+ H+ +++H DLKP+NV LD LGDFG+A++L+ S
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF 172
Query: 1492 KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMME 1528
+ + T YM+PE + + D++S G L+ E
Sbjct: 173 AKAF-VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 59.3 bits (142), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G G+F V + + G A K+ N + A + + E + R ++H N+V++ S
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 809 CSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHC 868
S G LI + + G L + + + +Y D + LE + H H V+H
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREY----YSEADASHCIQQILEAVLHCHQMGVVHR 145
Query: 869 DLKPSNVLLDDD---TVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTC 925
DLKP N+LL L+DFG++ ++GE T GY++PE +
Sbjct: 146 DLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA-GTPGYLSPEVLRKDPYGKP 204
Query: 926 GDVYSFGILM 935
D+++ G+++
Sbjct: 205 VDLWACGVIL 214
Score = 52.8 bits (125), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 1343 LGTGIFSSVYKAT-FADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSS 1399
LG G FS V + G A KI + ++ R + + E + R ++H N+ ++ S
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
S G LI + G L + + + Y D + LE + + ++H
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYY----SEADASHCIQQILEAVLHCHQMGVVHR 145
Query: 1460 DLKPSNVLLDDDM---VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTS 1516
DLKP N+LL + L DFG+A ++G + T GY++PE +
Sbjct: 146 DLKPENLLLASKLKGAAVKLADFGLAIEVEG-EQQAWFGFAGTPGYLSPEVLRKDPYGKP 204
Query: 1517 GDVYSFGILMMETLTRRKP 1535
D+++ G+++ L P
Sbjct: 205 VDLWACGVILYILLVGYPP 223
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 27/232 (11%)
Query: 742 LTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFN---------LQLDGAIKSFDAEC 791
L D + S +G+G+ G V A VAI++ + + D A+ + + E
Sbjct: 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL-NVETEI 191
Query: 792 EVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVA 851
E+L+++ H ++KI + + ++LE M G L + +K +L +
Sbjct: 192 EILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQML 249
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLL---DDDTVAHLSDFGISKLLDGEDSVTQTMTLAT 908
A++YLH +IH DLKP NVLL ++D + ++DFG SK+L GE S+ +T+ T
Sbjct: 250 LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLC-GT 304
Query: 909 FGYMAPE----YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLK 956
Y+APE G+ G + D +S G+++ + P E T + SLK
Sbjct: 305 PTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLK 354
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 112/238 (47%), Gaps = 37/238 (15%)
Query: 1340 SNLLGTGIFSSVYKATFADGT--NAAIKIFSLQE---------DRALKSFDAECEVMRRI 1388
S LG+G V K F T AI+I S ++ D AL + + E E+++++
Sbjct: 140 SKTLGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPAL-NVETEIEILKKL 197
Query: 1389 RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYL 1448
H + KI + + ++L+ M G L + + L +L + A++YL
Sbjct: 198 NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAVQYL 255
Query: 1449 HQGYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAP 1505
H+ IIH DLKP NVLL ++D + + DFG +K+L G S+ +T+ T Y+AP
Sbjct: 256 HEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLC-GTPTYLAP 310
Query: 1506 E----YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVT 1559
E G+ G + + D +S G+++ L+ P + H + SL D +T
Sbjct: 311 EVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSE---------HRTQVSLKDQIT 358
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ R RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-- 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +T
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 1497 LATIGYMAPEY--GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 192 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 240
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L R RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 148
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPEY--G 917
V+H DLKPSN+LL+ + DFG++++ D + T +T +AT Y APE
Sbjct: 149 ---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 206 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 240
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ R RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-- 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +T
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 1497 LATIGYMAPE--YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 192 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 240
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L R RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 148
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPE--YG 917
V+H DLKPSN+LL+ + DFG++++ D + T +T +AT Y APE
Sbjct: 149 ---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 206 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 240
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 86/194 (44%), Gaps = 8/194 (4%)
Query: 746 FSESNLIGAGSFGSVYKATLPYGMNV-AIKVFNLQLDGAIKSF-DAECEVLRRVRHRNLV 803
F++ + IG GSFG VYK + V AIK+ +L+ E VL + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
+ S +I+EY+ GS L L I+ ++ L+YLH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPG--PLEETYIATILREILKGLDYLHSERK- 137
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVS 923
IH D+K +NVLL + L+DFG++ L + + + + T +MAPE +
Sbjct: 138 --IHRDIKAANVLLSEQGDVKLADFGVAGQL-TDTQIKRNXFVGTPFWMAPEVIKQSAYD 194
Query: 924 TCGDVYSFGILMIE 937
D++S GI IE
Sbjct: 195 FKADIWSLGITAIE 208
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 96/237 (40%), Gaps = 37/237 (15%)
Query: 1320 AALRRISYQELRLATNG-FSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSF 1378
A LR + Q R+ F++ + +G G F VYK G + K E A+K
Sbjct: 3 AHLRGFANQHSRVDPEELFTKLDRIGKGSFGEVYK-----GIDNHTK-----EVVAIKII 52
Query: 1379 DAECEVMRRIRHRNLAKIVSSCSNPGFKA------------LILQYMPQGS----LEKWL 1422
D E + ++S C +P +I++Y+ GS L+
Sbjct: 53 DLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP 112
Query: 1423 YSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIA 1482
Y+ I + ++ L+YLH S IH D+K +NVLL + L DFG+A
Sbjct: 113 LEETYIATI------LREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVA 163
Query: 1483 KLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDM 1539
L +K+ + T +MAPE + D++S GI +E P D+
Sbjct: 164 GQLTDT-QIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 97/228 (42%), Gaps = 10/228 (4%)
Query: 724 DSLSLATWRRISYQELQRL-TDGFSESNLIGAGSFGSVY----KATLPYGMNVAIKVFNL 778
DSL + + + E Q + D F + ++G G FG V+ KAT + L
Sbjct: 164 DSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRL 223
Query: 779 QLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL 838
+ + E ++L +V R +V + + L++ M G + +Y+
Sbjct: 224 KKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN 283
Query: 839 NIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED 898
Q + A + L H H +I+ DLKP NVLLDDD +SD G++ L
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343
Query: 899 SVTQTMTLATFGYMAPE--YGSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ T+ T G+MAPE G E S D ++ G+ + E + P
Sbjct: 344 TKTKGYA-GTPGFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 1441 VACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATI 1500
+ LE+LHQ +II+ DLKP NVLLDDD + D G+A L K T
Sbjct: 298 IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELK-AGQTKTKGYAGTP 353
Query: 1501 GYMAPE--YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
G+MAPE G E S D ++ G+ + E + R P
Sbjct: 354 GFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 97/228 (42%), Gaps = 10/228 (4%)
Query: 724 DSLSLATWRRISYQELQRL-TDGFSESNLIGAGSFGSVY----KATLPYGMNVAIKVFNL 778
DSL + + + E Q + D F + ++G G FG V+ KAT + L
Sbjct: 164 DSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRL 223
Query: 779 QLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL 838
+ + E ++L +V R +V + + L++ M G + +Y+
Sbjct: 224 KKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN 283
Query: 839 NIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED 898
Q + A + L H H +I+ DLKP NVLLDDD +SD G++ L
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343
Query: 899 SVTQTMTLATFGYMAPE--YGSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ T+ T G+MAPE G E S D ++ G+ + E + P
Sbjct: 344 TKTKGYA-GTPGFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 1441 VACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATI 1500
+ LE+LHQ +II+ DLKP NVLLDDD + D G+A L K T
Sbjct: 298 IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELK-AGQTKTKGYAGTP 353
Query: 1501 GYMAPE--YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
G+MAPE G E S D ++ G+ + E + R P
Sbjct: 354 GFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ R RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-- 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +T
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 1497 LATIGYMAPEY--GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 188 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 236
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L R RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 144
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPEY--G 917
V+H DLKPSN+LL+ + DFG++++ D + T +T +AT Y APE
Sbjct: 145 ---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 202 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 236
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ R RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-- 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +T
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 1497 LATIGYMAPEY--GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 188 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 236
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L R RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 144
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPEY--G 917
V+H DLKPSN+LL+ + DFG++++ D + T +T +AT Y APE
Sbjct: 145 ---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 202 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 236
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 22/137 (16%)
Query: 1410 LQYMPQGSLEKWLYSHNYLLNIEQR-----LDIMIDVACALEYLHQGYSTSIIHCDLKPS 1464
+Q + +L+ W+ N ++E R L I I +A A+E+LH S ++H DLKPS
Sbjct: 140 MQLCRKENLKDWM---NRRCSLEDREHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPS 193
Query: 1465 NVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-----------LATIGYMAPEYGSEGIV 1513
N+ D V +GDFG+ +D + + +T + T YM+PE
Sbjct: 194 NIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNY 253
Query: 1514 STSGDVYSFGILMMETL 1530
S D++S G+++ E L
Sbjct: 254 SHKVDIFSLGLILFELL 270
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 844 LDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT 903
L I I +A A+E+LH ++H DLKPSN+ D V + DFG+ +D ++
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 904 MT-----------LATFGYMAPEYGSEGIVSTCGDVYSFGILMIE---TFTRKMPTDEMF 949
+T + T YM+PE S D++S G+++ E +F+ +M +
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRII 283
Query: 950 TGETSLK 956
T +LK
Sbjct: 284 TDVRNLK 290
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 97/228 (42%), Gaps = 10/228 (4%)
Query: 724 DSLSLATWRRISYQELQRL-TDGFSESNLIGAGSFGSVY----KATLPYGMNVAIKVFNL 778
DSL + + + E Q + D F + ++G G FG V+ KAT + L
Sbjct: 164 DSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRL 223
Query: 779 QLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTL 838
+ + E ++L +V R +V + + L++ M G + +Y+
Sbjct: 224 KKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN 283
Query: 839 NIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGED 898
Q + A + L H H +I+ DLKP NVLLDDD +SD G++ L
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343
Query: 899 SVTQTMTLATFGYMAPE--YGSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ T+ T G+MAPE G E S D ++ G+ + E + P
Sbjct: 344 TKTKGYA-GTPGFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 1441 VACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATI 1500
+ LE+LHQ +II+ DLKP NVLLDDD + D G+A L K T
Sbjct: 298 IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELK-AGQTKTKGYAGTP 353
Query: 1501 GYMAPE--YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
G+MAPE G E S D ++ G+ + E + R P
Sbjct: 354 GFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation
At Position 52
Length = 364
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ R RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-- 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +T
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 1497 LATIGYMAPE--YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 192 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 240
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAI-KVFNLQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAI K+ + + E ++L R RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 148
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPE--YG 917
V+H DLKPSN+LL+ + DFG++++ D + T +T +AT Y APE
Sbjct: 149 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 206 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 240
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKV---FNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG GS+G K + + + + + +E +LR ++H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 809 CSNHGFKAL--ILEYMPQGSLEKWLYS---HKYTLNIQQRLDIMIDVASALEYLHH---- 859
+ L ++EY G L + + L+ + L +M + AL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
GH V+H DLKP+NV LD L DFG++++L+ ++ + + T YM+PE +
Sbjct: 134 GHT--VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF-VGTPYYMSPEQMNR 190
Query: 920 GIVSTCGDVYSFGILMIE 937
+ D++S G L+ E
Sbjct: 191 MSYNEKSDIWSLGCLLYE 208
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 1380 AECEVMRRIRHRNLAKIVSSCSNPGFKAL--ILQYMPQGSLE----KWLYSHNYLLNIEQ 1433
+E ++R ++H N+ + + L +++Y G L K YL + E
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL-DEEF 112
Query: 1434 RLDIMIDVACALEYLHQGYS--TSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491
L +M + AL+ H+ +++H DLKP+NV LD LGDFG+A++L+ +
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDF 172
Query: 1492 KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMME 1528
+ + T YM+PE + + D++S G L+ E
Sbjct: 173 AKEF-VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 16/205 (7%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKS----FDAECEVLRRVRHRNLVKIIS 807
IG GSF +VYK L V + LQ KS F E E L+ ++H N+V+
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 808 SCSN--HGFKALIL--EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
S + G K ++L E G+L+ +L K I+ + L++LH P
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFK-VXKIKVLRSWCRQILKGLQFLHTRTP- 150
Query: 864 PVIHCDLKPSNVLLDDDT-VAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIV 922
P+IH DLK N+ + T + D G++ L + + + T + APE E
Sbjct: 151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXAPEXYEEKYD 207
Query: 923 STCGDVYSFGILMIETFTRKMPTDE 947
+ DVY+FG +E T + P E
Sbjct: 208 ESV-DVYAFGXCXLEXATSEYPYSE 231
Score = 50.1 bits (118), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 22/205 (10%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKS----FDAECEVMRRIRHRNLAKIVS 1398
+G G F +VYK + T + LQ+ + KS F E E ++ ++H N+ +
Sbjct: 34 IGRGSFKTVYKGLDTE-TTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 1399 SCSN--PGFKALIL--QYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYST 1454
S + G K ++L + G+L+ +L + I+ + L++LH +
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFK-VXKIKVLRSWCRQILKGLQFLHT-RTP 150
Query: 1455 SIIHCDLKPSNVLLDDDM-VAHLGDFGIAKLLDGVDSMKQTMTLATIG---YMAPEYGSE 1510
IIH DLK N+ + +GD G+A L + + A IG + APE E
Sbjct: 151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATL------KRASFAKAVIGTPEFXAPEXYEE 204
Query: 1511 GIVSTSGDVYSFGILMMETLTRRKP 1535
S DVY+FG +E T P
Sbjct: 205 K-YDESVDVYAFGXCXLEXATSEYP 228
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ R RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 135
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-- 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +T
Sbjct: 136 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 192
Query: 1497 LATIGYMAPE--YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 193 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 241
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L R RH N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 149
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPE--YG 917
V+H DLKPSN+LL+ + DFG++++ D + T +T +AT Y APE
Sbjct: 150 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 206
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 207 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 241
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ R RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 77 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 136
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-- 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +T
Sbjct: 137 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 193
Query: 1497 LATIGYMAPE--YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 194 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 242
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L R RH N++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 150
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPE--YG 917
V+H DLKPSN+LL+ + DFG++++ D + T +T +AT Y APE
Sbjct: 151 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 207
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 208 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 242
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ R RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 68 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 127
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-- 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +T
Sbjct: 128 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 184
Query: 1497 LATIGYMAPE--YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 185 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 233
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L R RH N++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 141
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPE--YG 917
V+H DLKPSN+LL+ + DFG++++ D + T +T +AT Y APE
Sbjct: 142 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 198
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 199 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 233
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ R RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-- 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +T
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 1497 LATIGYMAPE--YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 192 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 240
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L R RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 148
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPE--YG 917
V+H DLKPSN+LL+ + DFG++++ D + T +T +AT Y APE
Sbjct: 149 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 206 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 240
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 752 IGAGSFGSVY----KATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIIS 807
+G+G+FG V+ KAT G K N + E ++ ++ H L+ +
Sbjct: 59 LGSGAFGVVHRCVEKAT---GRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHD 115
Query: 808 SCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
+ + LILE++ G L + + Y ++ + ++ M A E L H H ++H
Sbjct: 116 AFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM---RQACEGLKHMHEHSIVH 172
Query: 868 CDLKPSNVLLDDDTVAHLS--DFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTC 925
D+KP N++ + + + DFG++ L+ ++ V +T AT + APE V
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV--KVTTATAEFAAPEIVDREPVGFY 230
Query: 926 GDVYSFGILMIETFTRKMPTDEMFTGETSLK 956
D+++ G+L + P F GE L+
Sbjct: 231 TDMWAIGVLGYVLLSGLSP----FAGEDDLE 257
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 12/204 (5%)
Query: 1343 LGTGIFSSVYKAT-FADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
LG+G F V++ A G K + + E +M ++ H L + +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 1402 NPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDL 1461
+ LIL+++ G L + + +Y ++ + ++ M L+++H+ SI+H D+
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDI 175
Query: 1462 KPSNVLLDDDMVAHLG--DFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDV 1519
KP N++ + + + DFG+A L+ + +K +T AT + APE V D+
Sbjct: 176 KPENIMCETKKASSVKIIDFGLATKLNPDEIVK--VTTATAEFAAPEIVDREPVGFYTDM 233
Query: 1520 YSFGILMMETLTRRKPTDDMFTGE 1543
++ G+L L+ P F GE
Sbjct: 234 WAIGVLGYVLLSGLSP----FAGE 253
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F IG GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
LVK+ S ++ +++EYMP G + +SH + A + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 212 SKGYNKAVDWWALGVLIYE 230
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F +GTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++YMP G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F IG GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
LVK+ S ++ +++EYMP G + +SH + A + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 212 SKGYNKAVDWWALGVLIYE 230
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F +GTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++YMP G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ R RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 128
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-- 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +T
Sbjct: 129 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 185
Query: 1497 LATIGYMAPE--YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 186 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 234
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L R RH N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 142
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPE--YG 917
V+H DLKPSN+LL+ + DFG++++ D + T +T +AT Y APE
Sbjct: 143 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 200 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 234
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ R RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 79 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 138
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-- 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +T
Sbjct: 139 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 195
Query: 1497 LATIGYMAPEY--GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 196 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 244
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L R RH N++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 152
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPEY--G 917
V+H DLKPSN+LL+ + DFG++++ D + T +T +AT Y APE
Sbjct: 153 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 209
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 210 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 244
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ R RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-- 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +T
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 1497 LATIGYMAPEY--GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 188 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 236
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L R RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 144
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPEY--G 917
V+H DLKPSN+LL+ + DFG++++ D + T +T +AT Y APE
Sbjct: 145 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 202 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 236
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ R RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 73 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-- 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +T
Sbjct: 133 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 1497 LATIGYMAPEY--GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 190 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 238
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L R RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 146
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPEY--G 917
V+H DLKPSN+LL+ + DFG++++ D + T +T +AT Y APE
Sbjct: 147 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 204 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 238
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ R RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 150
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-- 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +T
Sbjct: 151 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 207
Query: 1497 LATIGYMAPEY--GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 208 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 256
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L R RH N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 164
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPEY--G 917
V+H DLKPSN+LL+ + DFG++++ D + T +T +AT Y APE
Sbjct: 165 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 222 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 256
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ R RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 128
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-- 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +T
Sbjct: 129 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 185
Query: 1497 LATIGYMAPE--YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 186 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 234
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L R RH N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 142
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPE--YG 917
V+H DLKPSN+LL+ + DFG++++ D + T +T +AT Y APE
Sbjct: 143 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 200 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 234
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 131/290 (45%), Gaps = 46/290 (15%)
Query: 109 VANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRIS----------------GN 152
+ANL+ L L + N+ P L + L ++LSSN IS GN
Sbjct: 108 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN 165
Query: 153 LFDDM--CNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLT 210
D+ +LT LE D+SSN+++ S L + L+ L + N+++ P +G LT
Sbjct: 166 QVTDLKPLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILT 221
Query: 211 ELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCM 270
L EL LNGN L+ T+ ++++L + LANN + P+ L L EL L
Sbjct: 222 NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPL---SGLTKLTELKLGANQ 276
Query: 271 TTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGN 330
+ P + T L L L +NQL D S I N N+ + LY N++S
Sbjct: 277 ISNISP--LAGLTALTNLELNENQLEDI----------SPISNLKNLTYLTLYFNNISDI 324
Query: 331 LPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLV 380
P S+ L L RL+ + N +S V SS+ N + + L N S L
Sbjct: 325 SPVSS---LTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLT 369
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 131/363 (36%), Gaps = 95/363 (26%)
Query: 279 IGNCTLLNYLGLRDNQLTDFGA-NNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGI 337
+ N T +N+ +NQLTD NLT L+ I+ NN+ I I
Sbjct: 67 LNNLTQINF---SNNQLTDITPLKNLTKLV-DILMNNNQIADITPLA------------- 109
Query: 338 NLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAY 397
NL NL L L+ N ++ + P + N + L LELS N S + A LQ L+
Sbjct: 110 NLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISA--LSGLTSLQQLSFG- 164
Query: 398 SQLAXXXXXXXXXXXXXXXNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELG 457
N L L I +N I SV +LE A + ++
Sbjct: 165 ---------NQVTDLKPLANLTTLERLDISSNKVSDI---SVLAKLTNLESLIATNNQIS 212
Query: 458 GGIPAEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLES 517
P G L+N+ LSL NQL T+ L NL LDL+ N I P L L
Sbjct: 213 DITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTK 266
Query: 518 LNTLLLQGNALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLEYILVVDFSLNLLS 577
L L L N + N P L+
Sbjct: 267 LTELKLGANQISNISP------------------------------------------LA 284
Query: 578 GCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGFQGSIPEAIGSLIS 637
G L LT L L+ NQL P I LK+LTYL L N P + SL
Sbjct: 285 G--------LTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTK 332
Query: 638 LEK 640
L++
Sbjct: 333 LQR 335
Score = 30.4 bits (67), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 81/197 (41%), Gaps = 26/197 (13%)
Query: 464 FGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLL 523
NL+N+ L+L+ NQ+ P + L NL L+LS N I S S L L SL L
Sbjct: 108 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF 163
Query: 524 QGNALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLEYILVVDFSL---------- 573
GN + + P + + +LE ++ + +
Sbjct: 164 -GNQVTDLKPLANLTTLERLDISSNKVSDISVL-AKLTNLESLIATNNQISDITPLGILT 221
Query: 574 NL----LSGCLPQDIGNLKVLTGLY---LSGNQLSCSIPSSIGGLKDLTYLALARNGFQG 626
NL L+G +DIG L LT L L+ NQ+S P + GL LT L L N
Sbjct: 222 NLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 279
Query: 627 SIPEA-IGSLISLEKGE 642
P A + +L +LE E
Sbjct: 280 ISPLAGLTALTNLELNE 296
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 11/225 (4%)
Query: 726 LSLATWRRISYQELQRLTDGFSESNLIGAGSFGSVY----KATLPYGMNVAIKVFNLQLD 781
L W+ + Q + D F + ++G G FG V+ KAT + L+
Sbjct: 169 LRFLQWKWLEAQPMGE--DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKR 226
Query: 782 GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQ 841
+ E ++L +V R +V + + L++ M G + +Y+
Sbjct: 227 KGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF 286
Query: 842 QRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVT 901
Q + A + L H H +I+ DLKP NVLLDDD +SD G++ L + T
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
Query: 902 QTMTLATFGYMAPE--YGSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ T G+MAPE G E S D ++ G+ + E + P
Sbjct: 347 KGYA-GTPGFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 1441 VACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATI 1500
+ LE+LHQ +II+ DLKP NVLLDDD + D G+A L K T
Sbjct: 298 IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELK-AGQTKTKGYAGTP 353
Query: 1501 GYMAPE--YGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
G+MAPE G E S D ++ G+ + E + R P
Sbjct: 354 GFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F +G GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
LVK+ S ++ +++EY+P G + +SH + A + +
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 142
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+L+D ++DFG +K + G +T TL T Y+APE
Sbjct: 143 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEYLAPEIIL 197
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 198 SKGYNKAVDWWALGVLIYE 216
Score = 57.0 bits (136), Expect = 8e-08, Method: Composition-based stats.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 14/204 (6%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 88
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+P G + L R + EYLH
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 144
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTL-ATIGYMAPEYGSEG 1511
S +I+ DLKP N+L+D + DFG AK + G +T TL T Y+APE
Sbjct: 145 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEYLAPEIILSK 199
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 200 GYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F +G GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
LVK+ S ++ +++EY+P G + +SH + A + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+L+D ++DFG +K + G +T TL T Y+APE
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEYLAPEIIL 212
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 213 SKGYNKAVDWWALGVLIYE 231
Score = 57.0 bits (136), Expect = 8e-08, Method: Composition-based stats.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 14/204 (6%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+P G + L R + EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTL-ATIGYMAPEYGSEG 1511
S +I+ DLKP N+L+D + DFG AK + G +T TL T Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEYLAPEIILSK 214
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ R RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-- 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +T
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 1497 LATIGYMAPEY--GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 188 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 236
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L R RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 144
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPEY--G 917
V+H DLKPSN+LL+ + DFG++++ D + T +T +AT Y APE
Sbjct: 145 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 202 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 236
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.2 bits (139), Expect = 4e-08, Method: Composition-based stats.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 21/215 (9%)
Query: 744 DGFSESNLIGAGSFGSVY--------KATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLR 795
+ F ++G G++G V+ Y M V K +Q + E +VL
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 796 RVRHRN-LVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRL---DIMIDVA 851
+R LV + + LIL+Y+ G L ++H L+ ++R ++ I V
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGEL----FTH---LSQRERFTEHEVQIYVG 166
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
+ L H H +I+ D+K N+LLD + L+DFG+SK +++ T Y
Sbjct: 167 EIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEY 226
Query: 912 MAPEY--GSEGIVSTCGDVYSFGILMIETFTRKMP 944
MAP+ G + D +S G+LM E T P
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
Score = 57.8 bits (138), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 17/217 (7%)
Query: 1331 RLATNGFSESNLLGTGIFSSVYKATFADGTNA----AIKIFS----LQEDRALKSFDAEC 1382
++ F +LGTG + V+ G + A+K+ +Q+ + + E
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 1383 EVMRRIRHRNLAKIVSSCSNPGFKA-LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-D 1440
+V+ IR + K LIL Y+ G L L E + I + +
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERF--TEHEVQIYVGE 167
Query: 1441 VACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATI 1500
+ ALE+LH+ II+ D+K N+LLD + L DFG++K ++ + TI
Sbjct: 168 IVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTI 224
Query: 1501 GYMAPEY--GSEGIVSTSGDVYSFGILMMETLTRRKP 1535
YMAP+ G + + D +S G+LM E LT P
Sbjct: 225 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.2 bits (139), Expect = 4e-08, Method: Composition-based stats.
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 33/229 (14%)
Query: 1330 LRLATNGFSESNLLGTGIFSSVYKATFA-DGTNAAIKIFSLQEDRALKSFDAECEVMRRI 1388
LR A++ F E +LG G F V KA A D AIK E++ L + +E ++ +
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVXLLASL 59
Query: 1389 RH-------------RNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRL 1435
H RN K ++ + +Y +L ++S N ++
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDGVDSMK-- 1492
+ + AL Y+H S IIH +LKP N+ +D+ +GDFG+AK + +D +K
Sbjct: 120 RLFRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 1493 ----------QTMTLATIGYMAPE-YGSEGIVSTSGDVYSFGILMMETL 1530
T + T Y+A E G + D YS GI+ E +
Sbjct: 177 SQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 90/225 (40%), Gaps = 32/225 (14%)
Query: 741 RLTDGFSESNLIGAGSFGSVYKATLPYGMNV-AIKVFNLQLDGAIKSFDAECEVLRRVRH 799
R F E ++G G+FG V KA AIK + + + +E +L + H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNH 61
Query: 800 -------------RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDI 846
RN VK ++ + EY +L ++S LN QQR +
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSE--NLN-QQRDEY 118
Query: 847 MIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK---------LLDGE 897
LE L + H +IH +LKP N+ +D+ + DFG++K LD +
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 898 D----SVTQTMTLATFGYMAPE-YGSEGIVSTCGDVYSFGILMIE 937
+ S T + T Y+A E G + D YS GI+ E
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 17/206 (8%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIK------SFDAECE 792
Q++ D + +G+G F V K G+ A K + A + + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+LR+V H N++ + N LILE + G L +L + K +L+ ++ + +
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA----HLSDFGISKLLDGEDSVTQTMTLAT 908
+ YLH + H DLKP N++L D + L DFG++ + ED V T
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGT 181
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGIL 934
++APE + + D++S G++
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVI 207
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 19/195 (9%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALK------SFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K + G A K ++ RA + + E ++R++ H N+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ N LIL+ + G L +L + L+ E+ + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 1456 IIHCDLKPSNVLLDDDMVA----HLGDFGIA-KLLDGVDSMKQTMTLATIGYMAPEYGSE 1510
I H DLKP N++L D + L DFG+A ++ DGV+ T ++APE +
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGTPEFVAPEIVNY 192
Query: 1511 GIVSTSGDVYSFGIL 1525
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 98/233 (42%), Gaps = 19/233 (8%)
Query: 1321 ALRRISYQELRLATNGFSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD 1379
+L I LR F L+G G + VYK G AAIK+ + D +
Sbjct: 10 SLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIK 68
Query: 1380 AECEVMRRI-RHRNLAKIVSSC---SNPGFKA---LILQYMPQGSLEKWLY-SHNYLLNI 1431
E ++++ HRN+A + + PG L++++ GS+ + + L
Sbjct: 69 QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE 128
Query: 1432 EQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSM 1491
E I ++ L +LHQ +IH D+K NVLL ++ L DFG++ LD
Sbjct: 129 EWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR 185
Query: 1492 KQTMTLATIGYMAPEY-----GSEGIVSTSGDVYSFGILMMETLTRRKPTDDM 1539
+ T + T +MAPE + D++S GI +E P DM
Sbjct: 186 RNTF-IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 237
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 19/206 (9%)
Query: 746 FSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV-RHRNLV 803
F L+G G++G VYK + G AIKV ++ D + E +L++ HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIA 84
Query: 804 KIISSCSNHGFKA------LILEYMPQGSLEKWLYSHK-YTLNIQQRLDIMIDVASALEY 856
+ L++E+ GS+ + + K TL + I ++ L +
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSH 144
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
LH VIH D+K NVLL ++ L DFG+S LD T + T +MAPE
Sbjct: 145 LHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF-IGTPYWMAPEV 200
Query: 917 -----GSEGIVSTCGDVYSFGILMIE 937
+ D++S GI IE
Sbjct: 201 IACDENPDATYDFKSDLWSLGITAIE 226
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.8 bits (138), Expect = 5e-08, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 1437 IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT 1496
I + + ALE+LH S+IH D+KPSNVL++ DFGI+ L VD + + +
Sbjct: 141 IAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKXCDFGISGYL--VDDVAKDID 196
Query: 1497 LATIGYMAPEYGSEGI----VSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
Y APE + + S D++S GI +E R P D T LK VEE
Sbjct: 197 AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEE 256
Query: 1553 SLPDAVTDVIDANLL 1567
P D A +
Sbjct: 257 PSPQLPADKFSAEFV 271
Score = 56.6 bits (135), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/120 (35%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 846 IMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT 905
I + + ALE+LH VIH D+KPSNVL++ DFGIS L D V + +
Sbjct: 141 IAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKXCDFGISGYL--VDDVAKDID 196
Query: 906 LATFGYMAPEYGSEGI----VSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEE 961
Y APE + + S D++S GI IE + P D T LK+ VEE
Sbjct: 197 AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEE 256
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQR-LDIMI 1439
E +++ ++ R + + + L+L M G L+ +Y E R +
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 1440 DVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT 1499
++ C LE LH+ I++ DLKP N+LLDD + D G+A + ++K + T
Sbjct: 294 EICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG--RVGT 348
Query: 1500 IGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
+GYMAPE + S D ++ G L+ E + + P
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 14/220 (6%)
Query: 731 WRRISYQELQRLTDGFSESNLIGAGSFGSVYKATLP-----YGMNVAIKVFNLQLDGAIK 785
W+ + Q + + T F + ++G G FG V + Y K + G
Sbjct: 173 WKWLERQPVTKNT--FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAM 230
Query: 786 SFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQR-L 844
+ + E ++L +V R +V + + L+L M G L+ +Y + R +
Sbjct: 231 ALN-EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAV 289
Query: 845 DIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM 904
++ LE LH +++ DLKP N+LLDD +SD G++ + + T
Sbjct: 290 FYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKG 344
Query: 905 TLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ T GYMAPE + D ++ G L+ E + P
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 24/181 (13%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLD---- 1436
E +++ R RH N+ I P + + Y+ Q +E LY LL + +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKCQHLSNDHIC 131
Query: 1437 -IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM 1495
+ + L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +
Sbjct: 132 YFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 188
Query: 1496 T--LATIGYMAPEY--GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE 1551
T +AT Y APE S+G + S D++S G ++ E L+ R +F G KH+++
Sbjct: 189 TEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 239
Query: 1552 E 1552
+
Sbjct: 240 Q 240
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 22/223 (9%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L R RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLD-----IMIDVASALEYLH 858
I + + Y+ Q +E LY L Q + + + L+Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKCQHLSNDHICYFLYQILRGLKYIH 145
Query: 859 HGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPEY 916
+ V+H DLKPSN+LL+ + DFG++++ D + T +T +AT Y APE
Sbjct: 146 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 917 --GSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 203 MLNSKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 240
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 57.8 bits (138), Expect = 5e-08, Method: Composition-based stats.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 21/225 (9%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIK------SFDAECE 792
Q++ D + +G+G F V K G+ A K + A + + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+LR+V H N++ + N LILE + G L +L + K +L+ ++ + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA----HLSDFGISKLLDGEDSVTQTMTLAT 908
+ YLH + H DLKP N++L D + L DFG++ + ED V T
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGT 181
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
++APE + + D++S G++ + P F G+T
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDT 222
Score = 53.5 bits (127), Expect = 9e-07, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALK------SFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K + G A K ++ RA + + E ++R++ H N+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ N LIL+ + G L +L + L+ E+ + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 1456 IIHCDLKPSNVLLDDDMVA----HLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG 1511
I H DLKP N++L D + L DFG+A ++ D ++ T ++APE +
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEFKNIFGTPEFVAPEIVNYE 193
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
+ D++S G++ L+ P
Sbjct: 194 PLGLEADMWSIGVITYILLSGASP 217
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 57.8 bits (138), Expect = 5e-08, Method: Composition-based stats.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 21/225 (9%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIK------SFDAECE 792
Q++ D + +G+G F V K G+ A K + A + + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+LR+V H N++ + N LILE + G L +L + K +L+ ++ + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA----HLSDFGISKLLDGEDSVTQTMTLAT 908
+ YLH + H DLKP N++L D + L DFG++ + ED V T
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGT 181
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
++APE + + D++S G++ + P F G+T
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDT 222
Score = 53.5 bits (127), Expect = 9e-07, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALK------SFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K + G A K ++ RA + + E ++R++ H N+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ N LIL+ + G L +L + L+ E+ + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 1456 IIHCDLKPSNVLLDDDMVA----HLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG 1511
I H DLKP N++L D + L DFG+A ++ D ++ T ++APE +
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEFKNIFGTPEFVAPEIVNYE 193
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
+ D++S G++ L+ P
Sbjct: 194 PLGLEADMWSIGVITYILLSGASP 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 57.8 bits (138), Expect = 5e-08, Method: Composition-based stats.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 21/225 (9%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIK------SFDAECE 792
Q++ D + +G+G F V K G+ A K + A + + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+LR+V H N++ + N LILE + G L +L + K +L+ ++ + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA----HLSDFGISKLLDGEDSVTQTMTLAT 908
+ YLH + H DLKP N++L D + L DFG++ + ED V T
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGT 181
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
++APE + + D++S G++ + P F G+T
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDT 222
Score = 53.5 bits (127), Expect = 9e-07, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALK------SFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K + G A K ++ RA + + E ++R++ H N+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ N LIL+ + G L +L + L+ E+ + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 1456 IIHCDLKPSNVLLDDDMVA----HLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG 1511
I H DLKP N++L D + L DFG+A ++ D ++ T ++APE +
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEFKNIFGTPEFVAPEIVNYE 193
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
+ D++S G++ L+ P
Sbjct: 194 PLGLEADMWSIGVITYILLSGASP 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 57.8 bits (138), Expect = 5e-08, Method: Composition-based stats.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 21/225 (9%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIK------SFDAECE 792
Q++ D + +G+G F V K G+ A K + A + + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+LR+V H N++ + N LILE + G L +L + K +L+ ++ + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA----HLSDFGISKLLDGEDSVTQTMTLAT 908
+ YLH + H DLKP N++L D + L DFG++ + ED V T
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGT 181
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
++APE + + D++S G++ + P F G+T
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDT 222
Score = 53.5 bits (127), Expect = 9e-07, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALK------SFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K + G A K ++ RA + + E ++R++ H N+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ N LIL+ + G L +L + L+ E+ + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 1456 IIHCDLKPSNVLLDDDMVA----HLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG 1511
I H DLKP N++L D + L DFG+A ++ D ++ T ++APE +
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEFKNIFGTPEFVAPEIVNYE 193
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
+ D++S G++ L+ P
Sbjct: 194 PLGLEADMWSIGVITYILLSGASP 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 57.8 bits (138), Expect = 5e-08, Method: Composition-based stats.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 21/225 (9%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIK------SFDAECE 792
Q++ D + +G+G F V K G+ A K + A + + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+LR+V H N++ + N LILE + G L +L + K +L+ ++ + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA----HLSDFGISKLLDGEDSVTQTMTLAT 908
+ YLH + H DLKP N++L D + L DFG++ + ED V T
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGT 181
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
++APE + + D++S G++ + P F G+T
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDT 222
Score = 53.5 bits (127), Expect = 9e-07, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALK------SFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K + G A K ++ RA + + E ++R++ H N+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ N LIL+ + G L +L + L+ E+ + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 1456 IIHCDLKPSNVLLDDDMVA----HLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG 1511
I H DLKP N++L D + L DFG+A ++ D ++ T ++APE +
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEFKNIFGTPEFVAPEIVNYE 193
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
+ D++S G++ L+ P
Sbjct: 194 PLGLEADMWSIGVITYILLSGASP 217
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Amp
Length = 576
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQR-LDIMI 1439
E +++ ++ R + + + L+L M G L+ +Y E R +
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 1440 DVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT 1499
++ C LE LH+ I++ DLKP N+LLDD + D G+A + ++K + T
Sbjct: 294 EICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG--RVGT 348
Query: 1500 IGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
+GYMAPE + S D ++ G L+ E + + P
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 14/220 (6%)
Query: 731 WRRISYQELQRLTDGFSESNLIGAGSFGSVYKATLP-----YGMNVAIKVFNLQLDGAIK 785
W+ + Q + + T F + ++G G FG V + Y K + G
Sbjct: 173 WKWLERQPVTKNT--FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAM 230
Query: 786 SFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQR-L 844
+ + E ++L +V R +V + + L+L M G L+ +Y + R +
Sbjct: 231 ALN-EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAV 289
Query: 845 DIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM 904
++ LE LH +++ DLKP N+LLDD +SD G++ + + T
Sbjct: 290 FYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKG 344
Query: 905 TLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ T GYMAPE + D ++ G L+ E + P
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3
(Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3
(Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.4 bits (137), Expect = 6e-08, Method: Composition-based stats.
Identities = 62/214 (28%), Positives = 93/214 (43%), Gaps = 25/214 (11%)
Query: 1343 LGTGIFSSV----YKATFADGTNAAIKIFSLQEDR---ALKSFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K T + IK L R + + + E ++R IRH N+
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIE--QRLDIMIDVACALEYLHQGYS 1453
+ N LIL+ + G L +L L E Q L ++D + YLH S
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVHYLH---S 126
Query: 1454 TSIIHCDLKPSNVLLDDDMVAH----LGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGS 1509
I H DLKP N++L D V + L DFGIA ++ + K T ++APE +
Sbjct: 127 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEFVAPEIVN 184
Query: 1510 EGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGE 1543
+ D++S G++ L+ P F GE
Sbjct: 185 YEPLGLEADMWSIGVITYILLSGASP----FLGE 214
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 14/173 (8%)
Query: 785 KSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRL 844
+ + E +LR +RH N++ + N LILE + G L +L + K +L +
Sbjct: 53 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEAT 111
Query: 845 DIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAH----LSDFGISKLLDGEDSV 900
+ + + YLH + H DLKP N++L D V + L DFGI+ ++ +
Sbjct: 112 QFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 168
Query: 901 TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
T ++APE + + D++S G++ + P F GET
Sbjct: 169 KN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGET 215
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.4 bits (137), Expect = 6e-08, Method: Composition-based stats.
Identities = 62/214 (28%), Positives = 93/214 (43%), Gaps = 25/214 (11%)
Query: 1343 LGTGIFSSV----YKATFADGTNAAIKIFSLQEDR---ALKSFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K T + IK L R + + + E ++R IRH N+
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIE--QRLDIMIDVACALEYLHQGYS 1453
+ N LIL+ + G L +L L E Q L ++D + YLH S
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVHYLH---S 133
Query: 1454 TSIIHCDLKPSNVLLDDDMVAH----LGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGS 1509
I H DLKP N++L D V + L DFGIA ++ + K T ++APE +
Sbjct: 134 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEFVAPEIVN 191
Query: 1510 EGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGE 1543
+ D++S G++ L+ P F GE
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASP----FLGE 221
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 14/173 (8%)
Query: 785 KSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRL 844
+ + E +LR +RH N++ + N LILE + G L +L + K +L +
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEAT 118
Query: 845 DIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAH----LSDFGISKLLDGEDSV 900
+ + + YLH + H DLKP N++L D V + L DFGI+ ++ +
Sbjct: 119 QFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 175
Query: 901 TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
T ++APE + + D++S G++ + P F GET
Sbjct: 176 KN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGET 222
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 11/201 (5%)
Query: 741 RLTDGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRV 797
R T+ + +G G+F V + + G A + N + A + + E + R +
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 798 RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYL 857
+H N+V++ S S G LI + + G L + + + +Y D + LE +
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYY----SEADASHCIQQILEAV 123
Query: 858 HHGHPTPVIHCDLKPSNVLLDDD---TVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAP 914
H H V+H +LKP N+LL L+DFG++ ++GE T GY++P
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA-GTPGYLSP 182
Query: 915 EYGSEGIVSTCGDVYSFGILM 935
E + D+++ G+++
Sbjct: 183 EVLRKDPYGKPVDLWACGVIL 203
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 11/190 (5%)
Query: 1343 LGTGIFSSVYKAT-FADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSS 1399
LG G FS V + G A I + ++ R + + E + R ++H N+ ++ S
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
S G LI + G L + + + Y D + LE + + ++H
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIVAREYY----SEADASHCIQQILEAVLHCHQMGVVHR 134
Query: 1460 DLKPSNVLLDDDM---VAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTS 1516
+LKP N+LL + L DFG+A ++G + T GY++PE +
Sbjct: 135 NLKPENLLLASKLKGAAVKLADFGLAIEVEG-EQQAWFGFAGTPGYLSPEVLRKDPYGKP 193
Query: 1517 GDVYSFGILM 1526
D+++ G+++
Sbjct: 194 VDLWACGVIL 203
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 57.4 bits (137), Expect = 6e-08, Method: Composition-based stats.
Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 35/225 (15%)
Query: 739 LQRLTDGFSESNLIGAGSFGSV----YKATLP-YGMNVAIKVFNLQLDGAIKSFDAECEV 793
LQ + + +IG G+FG V +KA+ Y M + K F + F E ++
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSK-FEMIKRSDSAFFWEERDI 128
Query: 794 LRRVRHRNLVKIISSCSNHGFKALILEYMPQGSL----------EKWLYSHKYTLNIQQR 843
+ +V++ + + + +++EYMP G L EKW + YT +
Sbjct: 129 MAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKW--AKFYTAEVVLA 186
Query: 844 LDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQT 903
LD + H +IH D+KP N+LLD L+DFG +D V
Sbjct: 187 LDAI-------------HSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCD 233
Query: 904 MTLATFGYMAPEY----GSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ T Y++PE G +G D +S G+ + E P
Sbjct: 234 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
Score = 54.7 bits (130), Expect = 4e-07, Method: Composition-based stats.
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 23/178 (12%)
Query: 1408 LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVL 1467
++++YMP G L + NY + + +V AL+ +H S +IH D+KP N+L
Sbjct: 152 MVMEYMPGGDLVNLM--SNYDVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNML 206
Query: 1468 LDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY----GSEGIVSTSGDVYSFG 1523
LD L DFG +D + + T Y++PE G +G D +S G
Sbjct: 207 LDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG 266
Query: 1524 ILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVID-ANLLSGEEEADIAAKKK 1580
+ + E L P + +SL + ++D N L E+A+I+ K
Sbjct: 267 VFLFEMLVGDTP-------------FYADSLVGTYSKIMDHKNSLCFPEDAEISKHAK 311
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 57.4 bits (137), Expect = 7e-08, Method: Composition-based stats.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 742 LTDGFSESNLIGAGSFGSVY----KATLPYGMNVAIKVFN---LQLDGAIKSFDAECEVL 794
+D + ++G GSFG V K T G A+KV + ++ +S E ++L
Sbjct: 47 FSDRYKGQRVLGKGSFGEVILCKDKIT---GQECAVKVISKRQVKQKTDKESLLREVQLL 103
Query: 795 RRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASAL 854
+++ H N++K+ + G+ L+ E G L + S K + I+ V S +
Sbjct: 104 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGI 162
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
Y+H ++H DLKP N+LL+ D + DFG+S + + + T Y
Sbjct: 163 TYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD--KIGTAYY 217
Query: 912 MAPEYGSEGIVSTCGDVYSFGILM 935
+APE C DV+S G+++
Sbjct: 218 IAPEVLHGTYDEKC-DVWSTGVIL 240
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/284 (23%), Positives = 120/284 (42%), Gaps = 38/284 (13%)
Query: 1334 TNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFS---LQEDRALKSFDAECEVMR 1386
++ + +LG G F V K T G A+K+ S +++ +S E ++++
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKIT---GQECAVKVISKRQVKQKTDKESLLREVQLLK 104
Query: 1387 RIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALE 1446
++ H N+ K+ + G+ L+ + G L + S ++ I+ V +
Sbjct: 105 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGIT 163
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
Y+H+ I+H DLKP N+LL+ D + DFG++ + MK + T Y+
Sbjct: 164 YMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD--KIGTAYYI 218
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
APE G DV+S G+++ L+ P + ++ K VE+
Sbjct: 219 APEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK--VEK----------- 264
Query: 1564 ANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDAL 1607
G+ ++ KK S L K +P R++ +DAL
Sbjct: 265 -----GKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDAL 303
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 57.4 bits (137), Expect = 7e-08, Method: Composition-based stats.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 742 LTDGFSESNLIGAGSFGSVY----KATLPYGMNVAIKVFN---LQLDGAIKSFDAECEVL 794
+D + ++G GSFG V K T G A+KV + ++ +S E ++L
Sbjct: 30 FSDRYKGQRVLGKGSFGEVILCKDKIT---GQECAVKVISKRQVKQKTDKESLLREVQLL 86
Query: 795 RRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASAL 854
+++ H N++K+ + G+ L+ E G L + S K + I+ V S +
Sbjct: 87 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGI 145
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
Y+H ++H DLKP N+LL+ D + DFG+S + + + T Y
Sbjct: 146 TYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD--KIGTAYY 200
Query: 912 MAPEYGSEGIVSTCGDVYSFGILM 935
+APE C DV+S G+++
Sbjct: 201 IAPEVLHGTYDEKC-DVWSTGVIL 223
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/284 (23%), Positives = 120/284 (42%), Gaps = 38/284 (13%)
Query: 1334 TNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFS---LQEDRALKSFDAECEVMR 1386
++ + +LG G F V K T G A+K+ S +++ +S E ++++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKIT---GQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 1387 RIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALE 1446
++ H N+ K+ + G+ L+ + G L + S ++ I+ V +
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGIT 146
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
Y+H+ I+H DLKP N+LL+ D + DFG++ + MK + T Y+
Sbjct: 147 YMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD--KIGTAYYI 201
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
APE G DV+S G+++ L+ P + ++ K VE+
Sbjct: 202 APEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK--VEK----------- 247
Query: 1564 ANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDAL 1607
G+ ++ KK S L K +P R++ +DAL
Sbjct: 248 -----GKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDAL 286
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 57.4 bits (137), Expect = 7e-08, Method: Composition-based stats.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 742 LTDGFSESNLIGAGSFGSVY----KATLPYGMNVAIKVFN---LQLDGAIKSFDAECEVL 794
+D + ++G GSFG V K T G A+KV + ++ +S E ++L
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKIT---GQECAVKVISKRQVKQKTDKESLLREVQLL 80
Query: 795 RRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASAL 854
+++ H N++K+ + G+ L+ E G L + S K + I+ V S +
Sbjct: 81 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGI 139
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
Y+H ++H DLKP N+LL+ D + DFG+S + + + T Y
Sbjct: 140 TYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD--KIGTAYY 194
Query: 912 MAPEYGSEGIVSTCGDVYSFGILM 935
+APE C DV+S G+++
Sbjct: 195 IAPEVLHGTYDEKC-DVWSTGVIL 217
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/284 (23%), Positives = 120/284 (42%), Gaps = 38/284 (13%)
Query: 1334 TNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFS---LQEDRALKSFDAECEVMR 1386
++ + +LG G F V K T G A+K+ S +++ +S E ++++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT---GQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 1387 RIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALE 1446
++ H N+ K+ + G+ L+ + G L + S ++ I+ V +
Sbjct: 82 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGIT 140
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
Y+H+ I+H DLKP N+LL+ D + DFG++ + MK + T Y+
Sbjct: 141 YMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD--KIGTAYYI 195
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
APE G DV+S G+++ L+ P + ++ K VE+
Sbjct: 196 APEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK--VEK----------- 241
Query: 1564 ANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDAL 1607
G+ ++ KK S L K +P R++ +DAL
Sbjct: 242 -----GKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDAL 280
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 57.4 bits (137), Expect = 7e-08, Method: Composition-based stats.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 742 LTDGFSESNLIGAGSFGSVY----KATLPYGMNVAIKVFN---LQLDGAIKSFDAECEVL 794
+D + ++G GSFG V K T G A+KV + ++ +S E ++L
Sbjct: 48 FSDRYKGQRVLGKGSFGEVILCKDKIT---GQECAVKVISKRQVKQKTDKESLLREVQLL 104
Query: 795 RRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASAL 854
+++ H N++K+ + G+ L+ E G L + S K + I+ V S +
Sbjct: 105 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGI 163
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
Y+H ++H DLKP N+LL+ D + DFG+S + + + T Y
Sbjct: 164 TYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD--KIGTAYY 218
Query: 912 MAPEYGSEGIVSTCGDVYSFGILM 935
+APE C DV+S G+++
Sbjct: 219 IAPEVLHGTYDEKC-DVWSTGVIL 241
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/284 (23%), Positives = 120/284 (42%), Gaps = 38/284 (13%)
Query: 1334 TNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFS---LQEDRALKSFDAECEVMR 1386
++ + +LG G F V K T G A+K+ S +++ +S E ++++
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKIT---GQECAVKVISKRQVKQKTDKESLLREVQLLK 105
Query: 1387 RIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALE 1446
++ H N+ K+ + G+ L+ + G L + S ++ I+ V +
Sbjct: 106 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGIT 164
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
Y+H+ I+H DLKP N+LL+ D + DFG++ + MK + T Y+
Sbjct: 165 YMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD--KIGTAYYI 219
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
APE G DV+S G+++ L+ P + ++ K VE+
Sbjct: 220 APEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK--VEK----------- 265
Query: 1564 ANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDAL 1607
G+ ++ KK S L K +P R++ +DAL
Sbjct: 266 -----GKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDAL 304
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 57.0 bits (136), Expect = 8e-08, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVF-NLQLDGAIKSFD-AECEVLRRVRHRNLVKIISS 808
IG GS+G V+K G VAIK F + D IK E +L++++H NLV ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 809 CSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHC 868
L+ EY L + +Y + + L I L+ ++ H IH
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHEL---DRYQRGVPEHLVKSI-TWQTLQAVNFCHKHNCIHR 126
Query: 869 DLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
D+KP N+L+ +V L DFG ++LL G +AT Y +PE
Sbjct: 127 DVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD-EVATRWYRSPE 172
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 25/201 (12%)
Query: 1343 LGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRAL--KSFDAECEVMRRIRHRNLAKIVSS 1399
+G G + V+K D G AIK F ED + K E ++++++H NL ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRL--DIMIDVACALEYLHQGYSTSII 1457
L+ +Y L + Y + + L I A+ + H+ + I
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHEL---DRYQRGVPEHLVKSITWQTLQAVNFCHK---HNCI 124
Query: 1458 HCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE-------YGSE 1510
H D+KP N+L+ V L DFG A+LL G +AT Y +PE YG
Sbjct: 125 HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD-EVATRWYRSPELLVGDTQYGP- 182
Query: 1511 GIVSTSGDVYSFGILMMETLT 1531
DV++ G + E L+
Sbjct: 183 -----PVDVWAIGCVFAELLS 198
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 14/205 (6%)
Query: 1343 LGTGIFSSVYKATFADGTN-AAIKIFSLQEDRALKSFDAECEV--MRRIRHRNLAKIVSS 1399
+G G + +V+KA + A+K L +D A E+ ++ ++H+N+ ++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
+ L+ ++ Q L+K+ S N L+ E + + L + H S +++H
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHR 125
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--YGSEGIVSTSG 1517
DLKP N+L++ + L DFG+A+ G+ + + T+ Y P+ +G++ + STS
Sbjct: 126 DLKPQNLLINRNGELKLADFGLARAF-GIPVRCYSAEVVTLWYRPPDVLFGAK-LYSTSI 183
Query: 1518 DVYSFGILMMETLTRRKPTDDMFTG 1542
D++S G + E +P +F G
Sbjct: 184 DMWSAGCIFAELANAARP---LFPG 205
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 11/191 (5%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISS 808
IG G++G+V+KA VA+K L D G S E +L+ ++H+N+V++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 809 CSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHC 868
+ L+ E+ Q L+K+ S L+ + + + L + H + V+H
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHR 125
Query: 869 DLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YGSEGIVSTCG 926
DLKP N+L++ + L+DFG+++ G + + T Y P+ +G++ + ST
Sbjct: 126 DLKPQNLLINRNGELKLADFGLARAF-GIPVRCYSAEVVTLWYRPPDVLFGAK-LYSTSI 183
Query: 927 DVYSFGILMIE 937
D++S G + E
Sbjct: 184 DMWSAGCIFAE 194
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 18/198 (9%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIIS- 807
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 808 ---SCSNHGFKALIL-EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
+ S F + L ++ L + S K T + Q L + + L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL--IYQILRGLKYIHSAD-- 145
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGI-V 922
+IH DLKPSN+ +++D+ + DFG+ + D E T +AT Y APE +
Sbjct: 146 -IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE----MTGYVATRWYRAPEIMLNWMHY 200
Query: 923 STCGDVYSFGILMIETFT 940
+ D++S G +M E T
Sbjct: 201 NQTVDIWSVGCIMAELLT 218
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+ + D D M T +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTD--DEM--TGYVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase
6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein Kinase
6 (Mapk6)
Length = 320
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 27/232 (11%)
Query: 1343 LGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
LG G V+ A D AIK L + +++K E +++RR+ H N+ K+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 1402 NPG---------FKALILQYMPQGSLEKWL---YSHNYLLNIEQRLDIMIDVACALEYLH 1449
G L Y+ Q +E L LL RL M + L+Y+H
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL-FMYQLLRGLKYIH 137
Query: 1450 QGYSTSIIHCDLKPSNVLLD-DDMVAHLGDFGIAKLLDGVDSMKQTMT--LATIGYMAPE 1506
S +++H DLKP+N+ ++ +D+V +GDFG+A+++D S K ++ L T Y +P
Sbjct: 138 ---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPR 194
Query: 1507 -YGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTG--EVCLKHWVEESLP 1555
S + + D+++ G + E LT + +F G E+ + ES+P
Sbjct: 195 LLLSPNNYTKAIDMWAAGCIFAEMLTGKT----LFAGAHELEQMQLILESIP 242
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 752 IGAGSFGSVYKATL-PYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
+G G G V+ A VAIK L ++K E +++RR+ H N+VK+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 811 NHGFK--------------ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
G + ++ EYM + L L L RL M + L+Y
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVL-EQGPLLEEHARL-FMYQLLRGLKY 135
Query: 857 LHHGHPTPVIHCDLKPSNVLLD-DDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMA 913
+H + V+H DLKP+N+ ++ +D V + DFG+++++D S ++ L T Y +
Sbjct: 136 IHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRS 192
Query: 914 PE-YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
P S + D+++ G + E T K +F G L++
Sbjct: 193 PRLLLSPNNYTKAIDMWAAGCIFAEMLTGKT----LFAGAHELEQ 233
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 56.6 bits (135), Expect = 1e-07, Method: Composition-based stats.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFN--LQLDGAIKSFDAECEVLRRVRHRNLVKII 806
IG+G+ G V Y A L NVAIK + Q K E +++ V H+N++ ++
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 807 SSCSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMID-------VASALE 855
+ + PQ +LE+ +L N+ Q + + +D + L
Sbjct: 90 NV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLX 137
Query: 856 YLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
+ H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPE 195
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E K+ +F G + +W
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
Score = 53.9 bits (128), Expect = 7e-07, Method: Composition-based stats.
Identities = 62/239 (25%), Positives = 98/239 (41%), Gaps = 46/239 (19%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEV 1384
YQ L+ +G GI + Y A N AIK S Q K E +
Sbjct: 26 YQNLKPIGSG-------AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD 1436
M+ + H+N+ +++ + PQ +LE++ L N I+ LD
Sbjct: 77 MKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELD 124
Query: 1437 ------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S
Sbjct: 125 HERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG--TS 179
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
T + T Y APE + D++S G +M E + R K +F G + W
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE-MVRHKI---LFPGRDYIDQW 234
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 15/196 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYGMNV--AIKVFNLQLDGAIKSFDAECEVLRRVRHRNLV 803
++ N IG GS+G V K + G + A K + F E E+++ + H N++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
++ + ++ L++E G L + + HK IM DV SA+ Y H +
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVV-HKRVFRESDAARIMKDVLSAVAYCHKLN-- 143
Query: 864 PVIHCDLKPSNVLL---DDDTVAHLSDFGI-SKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
V H DLKP N L D+ L DFG+ ++ G+ T+ + T Y++P+ E
Sbjct: 144 -VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSPQV-LE 198
Query: 920 GIVSTCGDVYSFGILM 935
G+ D +S G++M
Sbjct: 199 GLYGPECDEWSAGVMM 214
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 21/220 (9%)
Query: 1337 FSESNLLGTGIFSSVYKATFADGTN---AAIKI---FSLQEDRALKSFDAECEVMRRIRH 1390
++ N +G G + V K GT AA KI F DR F E E+M+ + H
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDR----FKQEIEIMKSLDH 82
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQ 1450
N+ ++ + + L+++ G L + + H + IM DV A+ Y H+
Sbjct: 83 PNIIRLYETFEDNTDIYLVMELCTGGELFERVV-HKRVFRESDAARIMKDVLSAVAYCHK 141
Query: 1451 GYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
++ H DLKP N L D L DFG+A M+ + T Y++P+
Sbjct: 142 ---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR--TKVGTPYYVSPQV 196
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK 1547
EG+ D +S G++M L P EV LK
Sbjct: 197 -LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLK 235
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 56.6 bits (135), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 35/227 (15%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSV----YKATLP-YGMNVAIKVFNLQLDGAIKSFDAEC 791
++L+ + + +IG G+FG V +K+T Y M + K F + F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSK-FEMIKRSDSAFFWEER 125
Query: 792 EVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSL----------EKWLYSHKYTLNIQ 841
+++ +V++ + + + +++EYMP G L EKW + YT +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKW--ARFYTAEVV 183
Query: 842 QRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVT 901
LD + H IH D+KP N+LLD L+DFG ++ E V
Sbjct: 184 LALDAI-------------HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 230
Query: 902 QTMTLATFGYMAPEY----GSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ T Y++PE G +G D +S G+ + E P
Sbjct: 231 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
Score = 53.9 bits (128), Expect = 7e-07, Method: Composition-based stats.
Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 13/216 (6%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSV----YKATFADGTNAAIKIFSLQEDRALKSFDAECE 1383
++LR+ + ++G G F V +K+T + F + + F E +
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVAC 1443
+M + ++ + + + ++++YMP G L + NY + + +V
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTAEVVL 184
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
AL+ +H S IH D+KP N+LLD L DFG ++ ++ + T Y+
Sbjct: 185 ALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 241
Query: 1504 APEY----GSEGIVSTSGDVYSFGILMMETLTRRKP 1535
+PE G +G D +S G+ + E L P
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 56.6 bits (135), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 35/227 (15%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSV----YKATLP-YGMNVAIKVFNLQLDGAIKSFDAEC 791
++L+ + + +IG G+FG V +K+T Y M + K F + F E
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSK-FEMIKRSDSAFFWEER 120
Query: 792 EVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSL----------EKWLYSHKYTLNIQ 841
+++ +V++ + + + +++EYMP G L EKW + YT +
Sbjct: 121 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKW--ARFYTAEVV 178
Query: 842 QRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVT 901
LD + H IH D+KP N+LLD L+DFG ++ E V
Sbjct: 179 LALDAI-------------HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 225
Query: 902 QTMTLATFGYMAPEY----GSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ T Y++PE G +G D +S G+ + E P
Sbjct: 226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
Score = 53.9 bits (128), Expect = 7e-07, Method: Composition-based stats.
Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 13/216 (6%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSV----YKATFADGTNAAIKIFSLQEDRALKSFDAECE 1383
++LR+ + ++G G F V +K+T + F + + F E +
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVAC 1443
+M + ++ + + + ++++YMP G L + NY + + +V
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTAEVVL 179
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
AL+ +H S IH D+KP N+LLD L DFG ++ ++ + T Y+
Sbjct: 180 ALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 236
Query: 1504 APEY----GSEGIVSTSGDVYSFGILMMETLTRRKP 1535
+PE G +G D +S G+ + E L P
Sbjct: 237 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 56.6 bits (135), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 35/227 (15%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSV----YKATLP-YGMNVAIKVFNLQLDGAIKSFDAEC 791
++L+ + + +IG G+FG V +K+T Y M + K F + F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSK-FEMIKRSDSAFFWEER 125
Query: 792 EVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSL----------EKWLYSHKYTLNIQ 841
+++ +V++ + + + +++EYMP G L EKW + YT +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKW--ARFYTAEVV 183
Query: 842 QRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVT 901
LD + H IH D+KP N+LLD L+DFG ++ E V
Sbjct: 184 LALDAI-------------HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 230
Query: 902 QTMTLATFGYMAPEY----GSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ T Y++PE G +G D +S G+ + E P
Sbjct: 231 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
Score = 53.9 bits (128), Expect = 7e-07, Method: Composition-based stats.
Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 13/216 (6%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSV----YKATFADGTNAAIKIFSLQEDRALKSFDAECE 1383
++LR+ + ++G G F V +K+T + F + + F E +
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVAC 1443
+M + ++ + + + ++++YMP G L + NY + + +V
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTAEVVL 184
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
AL+ +H S IH D+KP N+LLD L DFG ++ ++ + T Y+
Sbjct: 185 ALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 241
Query: 1504 APEY----GSEGIVSTSGDVYSFGILMMETLTRRKP 1535
+PE G +G D +S G+ + E L P
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ R RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM--T 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX 191
Query: 1497 LATIGYMAPEY--GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 192 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 240
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L R RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 148
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM--TLATFGYMAPEY--G 917
V+H DLKPSN+LL+ + DFG++++ D + T + +AT Y APE
Sbjct: 149 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 205
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 206 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 240
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ R RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 135
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTM--T 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +
Sbjct: 136 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX 192
Query: 1497 LATIGYMAPEY--GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 193 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 241
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L R RH N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 149
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM--TLATFGYMAPEY--G 917
V+H DLKPSN+LL+ + DFG++++ D + T + +AT Y APE
Sbjct: 150 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 206
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 207 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 241
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo)
Length = 271
Score = 56.6 bits (135), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 9/202 (4%)
Query: 1359 GTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSCSNPG--FKALILQYMP 1414
G + +K+ +++ R + F+ EC +R H N+ ++ +C +P LI + P
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 1415 QGSLEKWLYS-HNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMV 1473
GSL L+ N++++ Q + +D A +LH I L +V +D+D
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHT-LEPLIPRHALNSRSVXIDEDXT 151
Query: 1474 AHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRR 1533
A + A + S + A + A + E S D +SF +L+ E +TR
Sbjct: 152 ARISX---ADVKFSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTRE 208
Query: 1534 KPTDDMFTGEVCLKHWVEESLP 1555
P D+ E+ K +E P
Sbjct: 209 VPFADLSNXEIGXKVALEGLRP 230
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 15/201 (7%)
Query: 768 GMNVAIKVFNLQLDGAIKS--FDAECEVLRRVRHRNLVKIISSCSN--HGFKALILEYMP 823
G ++ +KV ++ KS F+ EC LR H N++ ++ +C + LI + P
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 824 QGSLEKWLYS-HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTV 882
GSL L+ + ++ Q + +D A +LH P H L +V +D+D
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHA-LNSRSVXIDEDXT 151
Query: 883 AHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY---GSEGIVSTCGDVYSFGILMIETF 939
A +S D + S ++APE E D +SF +L+ E
Sbjct: 152 ARISX------ADVKFSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELV 205
Query: 940 TRKMPTDEMFTGETSLKKWVE 960
TR++P ++ E K +E
Sbjct: 206 TREVPFADLSNXEIGXKVALE 226
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 15/196 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYGMNV--AIKVFNLQLDGAIKSFDAECEVLRRVRHRNLV 803
++ N IG GS+G V K + G + A K + F E E+++ + H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
++ + ++ L++E G L + + HK IM DV SA+ Y H +
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVV-HKRVFRESDAARIMKDVLSAVAYCHKLN-- 126
Query: 864 PVIHCDLKPSNVLL---DDDTVAHLSDFGI-SKLLDGEDSVTQTMTLATFGYMAPEYGSE 919
V H DLKP N L D+ L DFG+ ++ G+ T+ + T Y++P+ E
Sbjct: 127 -VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSPQV-LE 181
Query: 920 GIVSTCGDVYSFGILM 935
G+ D +S G++M
Sbjct: 182 GLYGPECDEWSAGVMM 197
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 21/220 (9%)
Query: 1337 FSESNLLGTGIFSSVYKATFADGTN---AAIKI---FSLQEDRALKSFDAECEVMRRIRH 1390
++ N +G G + V K GT AA KI F DR F E E+M+ + H
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDR----FKQEIEIMKSLDH 65
Query: 1391 RNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQ 1450
N+ ++ + + L+++ G L + + H + IM DV A+ Y H+
Sbjct: 66 PNIIRLYETFEDNTDIYLVMELCTGGELFERVV-HKRVFRESDAARIMKDVLSAVAYCHK 124
Query: 1451 GYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
++ H DLKP N L D L DFG+A M+ + T Y++P+
Sbjct: 125 ---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR--TKVGTPYYVSPQV 179
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK 1547
EG+ D +S G++M L P EV LK
Sbjct: 180 -LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLK 218
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 56.6 bits (135), Expect = 1e-07, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F IG GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
LVK+ S ++ +++EY+P G + +SH + A + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 212 SKGYNKAVDWWALGVLIYE 230
Score = 54.3 bits (129), Expect = 6e-07, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F +GTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+P G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 92 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D+ + DFG+++ D E T +AT Y APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVATRWYRAPEI 195
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLT 220
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 86
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 87 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 140 LKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTD--DEM--TGYVATRWYRA 192
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 96 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D+ + DFG+++ D E T +AT Y APE
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVATRWYRAPEI 199
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLT 224
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 90
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 91 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTD--DEM--TGYVATRWYRA 196
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 93/211 (44%), Gaps = 28/211 (13%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV--RHRNLVKIISS- 808
IG G +G V+ G VA+KVF + S+ E E+ + V RH N++ I++
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTTEEA---SWFRETEIYQTVLMRHENILGFIAAD 100
Query: 809 ---CSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH------H 859
+ LI +Y GSL +L S TL+ + L + S L +LH
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQ 158
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGIS-KLLD--GEDSVTQTMTLATFGYMAPEY 916
G P + H DLK N+L+ + ++D G++ K + E + + T YM PE
Sbjct: 159 GKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEV 217
Query: 917 GSEGI------VSTCGDVYSFGILMIETFTR 941
E + D+YSFG+++ E R
Sbjct: 218 LDESLNRNHFQSYIMADMYSFGLILWEVARR 248
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 26/210 (12%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRI--RHRN-LAKIVSS 1399
+G G + V+ + G A+K+F E+ S+ E E+ + + RH N L I +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAAD 100
Query: 1400 CSNPGFKA---LILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLH-QGYST- 1454
G LI Y GSL +L S L+ + L + L +LH + +ST
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEIFSTQ 158
Query: 1455 ---SIIHCDLKPSNVLLDDDMVAHLGDFGIA-KLLDGVDSMK--QTMTLATIGYMAPEYG 1508
+I H DLK N+L+ + + D G+A K + + + + T YM PE
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL 218
Query: 1509 SEGIVSTS------GDVYSFGILMMETLTR 1532
E + D+YSFG+++ E R
Sbjct: 219 DESLNRNHFQSYIMADMYSFGLILWEVARR 248
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 130/290 (44%), Gaps = 46/290 (15%)
Query: 109 VANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRIS----------------GN 152
+ANL+ L L + N+ P L + L ++LSSN IS GN
Sbjct: 107 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN 164
Query: 153 LFDDM--CNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLT 210
D+ +LT LE D+SSN+++ S L + L+ L + N+++ P +G LT
Sbjct: 165 QVTDLKPLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILT 220
Query: 211 ELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCM 270
L EL LNGN L+ T+ ++++L + LANN + P+ L L EL L
Sbjct: 221 NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPL---SGLTKLTELKLGANQ 275
Query: 271 TTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGN 330
+ P + T L L L +NQL D S I N N+ + LY N++S
Sbjct: 276 ISNISP--LAGLTALTNLELNENQLEDI----------SPISNLKNLTYLTLYFNNISDI 323
Query: 331 LPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLV 380
P S+ L L RL+ N +S V SS+ N + + L N S L
Sbjct: 324 SPVSS---LTKLQRLFFANNKVSDV--SSLANLTNINWLSAGHNQISDLT 368
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 101/256 (39%), Gaps = 41/256 (16%)
Query: 279 IGNCTLLNYLGLRDNQLTDFGA-NNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGI 337
+ N T +N+ +NQLTD NLT L+ I+ NN+ I I
Sbjct: 66 LNNLTQINF---SNNQLTDITPLKNLTKLV-DILMNNNQIADITPLA------------- 108
Query: 338 NLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAY 397
NL NL L L+ N ++ + P + N + L LELS N S + A LQ L+
Sbjct: 109 NLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISA--LSGLTSLQQLSFG- 163
Query: 398 SQLAXXXXXXXXXXXXXXXNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELG 457
N L L I +N I SV +LE A + ++
Sbjct: 164 ---------NQVTDLKPLANLTTLERLDISSNKVSDI---SVLAKLTNLESLIATNNQIS 211
Query: 458 GGIPAEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLES 517
P G L+N+ LSL NQL T+ L NL LDL+ N I P L L
Sbjct: 212 DITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTK 265
Query: 518 LNTLLLQGNALQNQIP 533
L L L N + N P
Sbjct: 266 LTELKLGANQISNISP 281
Score = 30.4 bits (67), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 81/197 (41%), Gaps = 26/197 (13%)
Query: 464 FGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLL 523
NL+N+ L+L+ NQ+ P + L NL L+LS N I S S L L SL L
Sbjct: 107 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF 162
Query: 524 QGNALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLEYILVVDFSL---------- 573
GN + + P + + +LE ++ + +
Sbjct: 163 -GNQVTDLKPLANLTTLERLDISSNKVSDISVL-AKLTNLESLIATNNQISDITPLGILT 220
Query: 574 NL----LSGCLPQDIGNLKVLTGLY---LSGNQLSCSIPSSIGGLKDLTYLALARNGFQG 626
NL L+G +DIG L LT L L+ NQ+S P + GL LT L L N
Sbjct: 221 NLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 278
Query: 627 SIPEA-IGSLISLEKGE 642
P A + +L +LE E
Sbjct: 279 ISPLAGLTALTNLELNE 295
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
IG+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 95 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEI 198
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLT 223
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 89
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 90 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 143 LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTD--DEM--TGYVATRWYRA 195
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 744 DGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRR 796
D F +G GSFG V +K T G + A+K+ + Q +K + E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 797 VRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
V LVK+ S ++ +++EY+P G + +SH + A +
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPE 915
+ H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPE 208
Query: 916 YGSEGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+P G + L R + EYLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 744 DGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRR 796
D F +G GSFG V +K T G + A+K+ + Q +K + E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 797 VRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
V LVK+ S ++ +++EY+P G + +SH + A +
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPE 915
+ H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPE 208
Query: 916 YGSEGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+P G + L R + EYLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 744 DGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRR 796
D F +G GSFG V +K T G + A+K+ + Q +K + E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 797 VRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
V LVK+ S ++ +++EY+P G + +SH + A +
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPE 915
+ H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPE 208
Query: 916 YGSEGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+P G + L R + EYLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 90/204 (44%), Gaps = 16/204 (7%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKS---FDAECEVLRRVRHRNLVKIIS 807
IG G++GSV K P G +A+K +D + D + V+R +V+
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDV-VMRSSDCPYIVQFYG 88
Query: 808 SCSNHGFKALILEYMPQGSLEKWLYSHKYTL---NIQQRLDIMIDVASALEYLHHGHPTP 864
+ G + +E M S +K Y + Y++ I + + I +A+ H
Sbjct: 89 ALFREGDCWICMELM-STSFDK-FYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK 146
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY----GSEG 920
+IH D+KPSN+LLD L DFGIS L DS+ +T YMAPE S
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQL--VDSIAKTRDAGCRPYMAPERIDPSASRQ 204
Query: 921 IVSTCGDVYSFGILMIETFTRKMP 944
DV+S GI + E T + P
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFP 228
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 1449 HQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY- 1507
H + IIH D+KPSN+LLD L DFGI+ L VDS+ +T YMAPE
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL--VDSIAKTRDAGCRPYMAPERI 197
Query: 1508 ---GSEGIVSTSGDVYSFGILMMETLTRRKP 1535
S DV+S GI + E T R P
Sbjct: 198 DPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 1344 GTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
GI + Y A N AIK S Q K E +M+ + H+N+
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNII------- 86
Query: 1402 NPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD------IMIDVACALEY 1447
+L+ + PQ +LE++ L N I+ LD ++ + C +++
Sbjct: 87 -----SLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
LH S IIH DLKPSN+++ D + DFG+A+ S T + T Y APE
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEV 196
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
+ D++S G +M E + R K +F G + W
Sbjct: 197 ILGMGYKENVDIWSVGCIMGE-MVRHKI---LFPGRDYIDQW 234
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 38/224 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFN--LQLDGAIKSFDAECEVLRRVRHRNLVKII 806
IG+G+ G V Y A L NVAIK + Q K E +++ V H+N++ ++
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 807 SSCSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL----- 857
+ + PQ +LE+ +L N+ Q + + +D + YL
Sbjct: 90 NV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELD-HERMSYLLYQML 136
Query: 858 ---HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAP 914
H H +IH DLKPSN+++ D + DFG+++ S T + T Y AP
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAP 194
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
E D++S G +M E K+ +F G + +W
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr-
3451
Length = 353
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 1344 GTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
GI + Y A N AIK S Q K E +M+ + H+N+ +++
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV-- 91
Query: 1402 NPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD------IMIDVACALEY 1447
+ PQ +LE++ L N I+ LD ++ + C +++
Sbjct: 92 ----------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
LH S IIH DLKPSN+++ D + DFG+A+ S T + T Y APE
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEV 196
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
+ D++S G +M E + R K +F G + W
Sbjct: 197 ILGMGYKENVDIWSVGCIMGE-MVRHKI---LFPGRDYIDQW 234
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 38/224 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFN--LQLDGAIKSFDAECEVLRRVRHRNLVKII 806
IG+G+ G V Y A L NVAIK + Q K E +++ V H+N++ ++
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 807 SSCSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL----- 857
+ + PQ +LE+ +L N+ Q + + +D + YL
Sbjct: 90 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQML 136
Query: 858 ---HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAP 914
H H +IH DLKPSN+++ D + DFG+++ S T + T Y AP
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAP 194
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
E D++S G +M E K+ +F G + +W
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 194 MLNAMHYNQTVDIWSVGCIMAELLT 218
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 56.2 bits (134), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F +G GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
LVK+ S ++ +++EY+P G + +SH + A + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 212
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 213 SKGYNKAVDWWALGVLIYE 231
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+P G + L R + EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 215
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.2 bits (134), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F +G GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
LVK+ S ++ +++EY+P G + +SH + A + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 212 SKGYNKAVDWWALGVLIYE 230
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+P G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.2 bits (134), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F +G GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
LVK+ S ++ +++EY+P G + +SH + A + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 212 SKGYNKAVDWWALGVLIYE 230
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+P G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 86/193 (44%), Gaps = 10/193 (5%)
Query: 750 NLIGAGSFGSV----YKAT-LPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVK 804
+IG GSFG V +KA + Y + V K L+ +L+ V+H LV
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
+ S +L+Y+ G L L + L + R ++ASAL YLH +
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLHSLN--- 159
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVST 924
+++ DLKP N+LLD L+DFG+ K +S T T T Y+APE +
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFC-GTPEYLAPEVLHKQPYDR 218
Query: 925 CGDVYSFGILMIE 937
D + G ++ E
Sbjct: 219 TVDWWCLGAVLYE 231
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 1341 NLLGTGIFSSVYKATF-ADGTNAAIKIFSLQEDRALKSFDAECEVM-------RRIRHRN 1392
++G G F V A A+ A+K+ LQ+ LK E +M + ++H
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKV--LQKKAILKK-KEEKHIMSERNVLLKNVKHPF 100
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L + S +L Y+ G L L L R ++A AL YLH
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH--- 156
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTL-ATIGYMAPEYGSEG 1511
S +I++ DLKP N+LLD L DFG+ K + ++ T T T Y+APE +
Sbjct: 157 SLNIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAPEVLHKQ 214
Query: 1512 IVSTSGDVYSFGILMMETLTRRKPTDDMFTGEV 1544
+ D + G ++ E L P T E+
Sbjct: 215 PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM 247
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 56.2 bits (134), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F +G GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
LVK+ S ++ +++EY+P G + +SH + A + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 212 SKGYNKAVDWWALGVLIYE 230
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+P G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 95/222 (42%), Gaps = 34/222 (15%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 71
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMID-------VASALEY 856
C NH +L+ + PQ +LE+ +L N+ Q + + +D + L
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXG 131
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
+ H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEV 189
Query: 917 GSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E K+ +F G + +W
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 227
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 91/222 (40%), Gaps = 39/222 (17%)
Query: 1344 GTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
GI + Y A N AIK S Q K E +M+ + H+N+ +++
Sbjct: 29 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV-- 84
Query: 1402 NPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD------IMIDVACALEY 1447
+ PQ +LE++ L N I+ LD ++ + +++
Sbjct: 85 ----------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKH 134
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
LH S IIH DLKPSN+++ D + DFG+A+ S T + T Y APE
Sbjct: 135 LH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEV 189
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
+ D++S G +M E + + +F G + W
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 227
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 129/292 (44%), Gaps = 49/292 (16%)
Query: 109 VANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESFD 168
+ANL+ L L + N+ P L + L ++LSSN IS + LT L+ +
Sbjct: 103 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD---ISALSGLTSLQQLN 157
Query: 169 VSSNQITGQLPSSLGDCSKLKRLSVSFNE------------LTGRIPQN--------IGN 208
SSNQ+T P L + + L+RL +S N+ L I N +G
Sbjct: 158 FSSNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGI 215
Query: 209 LTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRD 268
LT L EL LNGN L+ T+ ++++L + LANN + P+ L L EL L
Sbjct: 216 LTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPL---SGLTKLTELKLGA 270
Query: 269 CMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLS 328
+ P + T L L L +NQL D S I N N+ + LY N++S
Sbjct: 271 NQISNISP--LAGLTALTNLELNENQLEDI----------SPISNLKNLTYLTLYFNNIS 318
Query: 329 GNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLV 380
P S+ L L RL+ + N +S V SS+ N + + L N S L
Sbjct: 319 DISPVSS---LTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLT 365
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 135/363 (37%), Gaps = 94/363 (25%)
Query: 279 IGNCTLLNYLGLRDNQLTDFGA-NNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGI 337
+ N T +N+ +NQLTD NLT L+ I+ NN+ I I
Sbjct: 62 LNNLTQINF---SNNQLTDITPLKNLTKLV-DILMNNNQIADITPLA------------- 104
Query: 338 NLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAY 397
NL NL L L+ N ++ + P + N + L LELS N S + A LQ LN +
Sbjct: 105 NLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISA--LSGLTSLQQLNFSS 160
Query: 398 SQLAXXXXXXXXXXXXXXXNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELG 457
+Q+ N L L I +N I SV +LE A + ++
Sbjct: 161 NQVT---------DLKPLANLTTLERLDISSNKVSDI---SVLAKLTNLESLIATNNQIS 208
Query: 458 GGIPAEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLES 517
P G L+N+ LSL NQL T+ L NL LDL+ N I P L L
Sbjct: 209 DITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTK 262
Query: 518 LNTLLLQGNALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLEYILVVDFSLNLLS 577
L L L N + N P L+
Sbjct: 263 LTELKLGANQISNISP------------------------------------------LA 280
Query: 578 GCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGFQGSIPEAIGSLIS 637
G L LT L L+ NQL P I LK+LTYL L N P + SL
Sbjct: 281 G--------LTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTK 328
Query: 638 LEK 640
L++
Sbjct: 329 LQR 331
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 80/197 (40%), Gaps = 25/197 (12%)
Query: 464 FGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLL 523
NL+N+ L+L+ NQ+ P + L NL L+LS N I S S L L SL L
Sbjct: 103 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTI--SDISALSGLTSLQQLNF 158
Query: 524 QGNALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLEYILVVDFSL---------- 573
N + + P + + +LE ++ + +
Sbjct: 159 SSNQVTDLKPLANLTTLERLDISSNKVSDISVL-AKLTNLESLIATNNQISDITPLGILT 217
Query: 574 NL----LSGCLPQDIGNLKVLTGLY---LSGNQLSCSIPSSIGGLKDLTYLALARNGFQG 626
NL L+G +DIG L LT L L+ NQ+S P + GL LT L L N
Sbjct: 218 NLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 275
Query: 627 SIPEA-IGSLISLEKGE 642
P A + +L +LE E
Sbjct: 276 ISPLAGLTALTNLELNE 292
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGXVATRWYRAPEI 193
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGXVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 93/214 (43%), Gaps = 25/214 (11%)
Query: 1343 LGTGIFSSVYK----ATFADGTNAAIKIFSLQEDR---ALKSFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K T + IK L R + + + E ++R IRH N+
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIE--QRLDIMIDVACALEYLHQGYS 1453
+ N LIL+ + G L +L L E Q L ++D + YLH S
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVHYLH---S 147
Query: 1454 TSIIHCDLKPSNVLLDDDMVAH----LGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGS 1509
I H DLKP N++L D V + L DFGIA ++ + K T ++APE +
Sbjct: 148 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEFVAPEIVN 205
Query: 1510 EGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGE 1543
+ D++S G++ L+ P F GE
Sbjct: 206 YEPLGLEADMWSIGVITYILLSGASP----FLGE 235
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 14/174 (8%)
Query: 785 KSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRL 844
+ + E +LR +RH N++ + N LILE + G L +L + K +L +
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEAT 132
Query: 845 DIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAH----LSDFGISKLLDGEDSV 900
+ + + YLH + H DLKP N++L D V + L DFGI+ ++ +
Sbjct: 133 QFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 189
Query: 901 TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETS 954
T ++APE + + D++S G++ + P F GET
Sbjct: 190 KN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGETK 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F +G GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
LVK+ S ++ +++EY+P G + +SH + A + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 212 SKGYNKAVDWWALGVLIYE 230
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+P G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F +G GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
LVK+ S ++ +++EY+P G + +SH + A + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 212 SKGYNKAVDWWALGVLIYE 230
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+P G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F +G GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
LVK+ S ++ +++EY+P G + +SH + A + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQIVLTFEY 157
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 212
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 213 SKGYNKAVDWWALGVLIYE 231
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+P G + L R + EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 159
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 215
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 95/222 (42%), Gaps = 34/222 (15%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 78
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMID-------VASALEY 856
C NH +L+ + PQ +LE+ +L N+ Q + + +D + L
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXG 138
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
+ H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEV 196
Query: 917 GSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E K+ +F G + +W
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 91/222 (40%), Gaps = 39/222 (17%)
Query: 1344 GTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
GI + Y A N AIK S Q K E +M+ + H+N+ +++
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV-- 91
Query: 1402 NPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD------IMIDVACALEY 1447
+ PQ +LE++ L N I+ LD ++ + +++
Sbjct: 92 ----------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKH 141
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
LH S IIH DLKPSN+++ D + DFG+A+ S T + T Y APE
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEV 196
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
+ D++S G +M E + + +F G + W
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 744 DGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRR 796
D F +G GSFG V +K T G + A+K+ + Q +K + E +L+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 797 VRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
V LVK+ S ++ +++EY+P G + +SH + A +
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 146
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPE 915
+ H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 147 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPE 201
Query: 916 YGSEGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 202 IILSKGYNKAVDWWALGVLIYE 223
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+P G + L R + EYLH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 151
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 207
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 744 DGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRR 796
D F +G GSFG V +K T G + A+K+ + Q +K + E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 797 VRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
V LVK+ S ++ +++EY+P G + +SH + A +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPE 915
+ H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPE 209
Query: 916 YGSEGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 210 IILSKGYNKAVDWWALGVLIYE 231
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+P G + L R + EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 215
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 744 DGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRR 796
D F +G GSFG V +K T G + A+K+ + Q +K + E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 797 VRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
V LVK+ S ++ +++EY+P G + +SH + A +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPE 915
+ H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPE 209
Query: 916 YGSEGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 210 IILSKGYNKAVDWWALGVLIYE 231
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+P G + L R + EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 215
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 744 DGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRR 796
D F +G GSFG V +K T G + A+K+ + Q +K + E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 797 VRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
V LVK+ S ++ +++EY+P G + +SH + A +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPE 915
+ H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPE 209
Query: 916 YGSEGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 210 IILSKGYNKAVDWWALGVLIYE 231
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+P G + L R + EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 215
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 744 DGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRR 796
D F +G GSFG V +K T G + A+K+ + Q +K + E +L+
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 797 VRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
V LVK+ S ++ +++EY+P G + +SH + A +
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 174
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPE 915
+ H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 175 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPE 229
Query: 916 YGSEGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 230 IILSKGYNKAVDWWALGVLIYE 251
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 64 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+P G + L R + EYLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 179
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 235
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 101 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEI 204
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLT 229
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 95
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 96 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 149 LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTD--DEM--TGYVATRWYRA 201
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 95 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEI 198
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLT 223
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 89
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 90 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 143 LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTD--DEM--TGYVATRWYRA 195
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 102 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 205
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLT 230
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 96
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 97 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 150 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 202
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 102 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 205
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLT 230
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 96
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 97 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 150 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 202
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTL---NIQQRLDIMIDVASALEY----- 856
+ P SLE+ +L +H NI + + D L Y
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTD--DEM--TGYVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+P G + L R + EYLH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 151
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 207
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPP 230
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 744 DGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRR 796
D F +G GSFG V +K T G + A+K+ + Q +K + E +L+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 797 VRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
V LVK+ S ++ +++EY+P G + +SH + A +
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQIVLT 146
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPE 915
+ H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 147 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPE 201
Query: 916 YGSEGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 202 IILSKGYNKAVDWWALGVLIYE 223
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 92 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 195
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLT 220
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 86
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 87 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 140 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 192
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 116/245 (47%), Gaps = 29/245 (11%)
Query: 136 MPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSF 195
+ L+ + SSN+++ + N LT LE D+SSN+++ S L + L+ L +
Sbjct: 150 LTSLQQLSFSSNQVTD--LKPLAN-LTTLERLDISSNKVSD--ISVLAKLTNLESLIATN 204
Query: 196 NELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLC 255
N+++ P +G LT L EL LNGN L+ T+ ++++L + LANN + P+
Sbjct: 205 NQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPL--- 257
Query: 256 RRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNS 315
L L EL L + P + T L L L +NQL D S I N
Sbjct: 258 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDI----------SPISNLK 305
Query: 316 NIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNL 375
N+ + LY N++S P S+ L L RL+ + N +S V SS+ N + + L N
Sbjct: 306 NLTYLTLYFNNISDISPVSS---LTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQ 360
Query: 376 FSGLV 380
S L
Sbjct: 361 ISDLT 365
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 135/363 (37%), Gaps = 94/363 (25%)
Query: 279 IGNCTLLNYLGLRDNQLTDFGA-NNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGI 337
+ N T +N+ +NQLTD NLT L+ I+ NN+ I I
Sbjct: 62 LNNLTQINF---SNNQLTDITPLKNLTKLV-DILMNNNQIADITPLA------------- 104
Query: 338 NLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAY 397
NL NL L L+ N ++ + P + N + L LELS N S + A LQ L+ +
Sbjct: 105 NLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISA--LSGLTSLQQLSFSS 160
Query: 398 SQLAXXXXXXXXXXXXXXXNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELG 457
+Q+ N L L I +N I SV +LE A + ++
Sbjct: 161 NQVT---------DLKPLANLTTLERLDISSNKVSDI---SVLAKLTNLESLIATNNQIS 208
Query: 458 GGIPAEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLES 517
P G L+N+ LSL NQL T+ L NL LDL+ N I P L L
Sbjct: 209 DITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTK 262
Query: 518 LNTLLLQGNALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLEYILVVDFSLNLLS 577
L L L N + N P L+
Sbjct: 263 LTELKLGANQISNISP------------------------------------------LA 280
Query: 578 GCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGFQGSIPEAIGSLIS 637
G L LT L L+ NQL P I LK+LTYL L N P + SL
Sbjct: 281 G--------LTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTK 328
Query: 638 LEK 640
L++
Sbjct: 329 LQR 331
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 80/197 (40%), Gaps = 25/197 (12%)
Query: 464 FGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLL 523
NL+N+ L+L+ NQ+ P + L NL L+LS N I S S L L SL L
Sbjct: 103 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF 158
Query: 524 QGNALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLEYILVVDFSL---------- 573
N + + P + + +LE ++ + +
Sbjct: 159 SSNQVTDLKPLANLTTLERLDISSNKVSDISVL-AKLTNLESLIATNNQISDITPLGILT 217
Query: 574 NL----LSGCLPQDIGNLKVLTGLY---LSGNQLSCSIPSSIGGLKDLTYLALARNGFQG 626
NL L+G +DIG L LT L L+ NQ+S P + GL LT L L N
Sbjct: 218 NLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 275
Query: 627 SIPEA-IGSLISLEKGE 642
P A + +L +LE E
Sbjct: 276 ISPLAGLTALTNLELNE 292
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-- 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +T
Sbjct: 133 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 1497 LATIGYMAPEY--GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 190 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 238
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 146
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPEY--G 917
V+H DLKPSN+LL+ + DFG++++ D + T +T +AT Y APE
Sbjct: 147 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 204 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 238
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 29/250 (11%)
Query: 725 SLSLATWRRISYQELQR----LTDGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQ 779
SLSL + Q++ + L + +G+G++GSV A G VAIK +
Sbjct: 1 SLSLIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRP 60
Query: 780 LDGAIKSFDA--ECEVLRRVRHRNLVKII------SSCSNHGFKALILEYMPQGSLEKWL 831
I + A E +L+ ++H N++ ++ SS N L++ +M Q L+K +
Sbjct: 61 FQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDLQK-I 118
Query: 832 YSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGIS 891
K++ Q L V L+ L + H V+H DLKP N+ +++D + DFG++
Sbjct: 119 MGLKFSEEKIQYL-----VYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 173
Query: 892 KLLDGEDSVTQTMTLATFGYMAPEYGSEGI-VSTCGDVYSFGILMIETFTRKMPTDEMFT 950
+ D E T + T Y APE + + D++S G +M E T K +F
Sbjct: 174 RHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT----LFK 225
Query: 951 GETSLKKWVE 960
G+ L + +
Sbjct: 226 GKDYLDQLTQ 235
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 65/257 (25%), Positives = 115/257 (44%), Gaps = 36/257 (14%)
Query: 1343 LGTGIFSSVYKATFA-DGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIV-- 1397
+G+G + SV A G AIK S Q + K E +++ ++H N+ ++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 1398 ----SSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVACALEYLHQGY 1452
SS N L++ +M Q L+K + L E+++ ++ + L+Y+H
Sbjct: 92 FTPASSLRNFYDFYLVMPFM-QTDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIH--- 143
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S ++H DLKP N+ +++D + DFG+A+ D + T + T Y APE +
Sbjct: 144 SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA----EMTGYVVTRWYRAPEVILSWM 199
Query: 1513 -VSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLSGEE 1571
+ + D++S G +M E LT + +F G+ L D +T ++ + G E
Sbjct: 200 HYNQTVDIWSVGCIMAEMLTGKT----LFKGKDYL---------DQLTQILKVTGVPGTE 246
Query: 1572 EADIAAKKKCMSSVMSL 1588
K S + SL
Sbjct: 247 FVQKLNDKAAKSYIQSL 263
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 18/178 (10%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYS--HNYLLNIEQRLDIM 1438
E +++ RH N+ I P + + Y+ Q +E LY L+ + +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT-- 1496
+ L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +T
Sbjct: 133 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 1497 LATIGYMAPEY--GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 190 VATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 238
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI--QQRLDIMIDVASALEYLHHGH 861
I + + Y+ Q +E LY T ++ + + L+Y+H +
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 146
Query: 862 PTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAPEY--G 917
V+H DLKPSN+LL+ + + DFG++++ D + T +T +AT Y APE
Sbjct: 147 ---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
S+G + D++S G ++ E + + +F G+ L +
Sbjct: 204 SKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 238
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 109 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 212
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLT 237
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 103
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 104 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 157 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 209
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 101 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 204
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLT 229
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 95
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 96 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 149 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 201
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 95 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 198
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLT 223
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 89
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 90 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 143 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 195
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 89 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 136
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 137 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 192
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 193 MLNWMHYNQTVDIWSVGCIMAELLT 217
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 83
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 84 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 136
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 137 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 189
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 88 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 135
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 136 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 191
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLT 216
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 82
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 83 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 135
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 136 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 188
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 113 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 216
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLT 241
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 107
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 108 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 161 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 213
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 96 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 199
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLT 224
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 90
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 91 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 196
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTL---NIQQRLDIMIDVASALEY----- 856
+ P SLE+ +L +H NI + + D L Y
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 102 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 205
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLT 230
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVI----- 96
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 97 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 150 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 202
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 86 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 189
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLT 214
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 80
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 81 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 186
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 92 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 195
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLT 220
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 86
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 87 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 140 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 192
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 87 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 134
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 190
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLT 215
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 81
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 82 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 134
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 135 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 187
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 87 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 134
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 190
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLT 215
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 81
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 82 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 134
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 135 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 187
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 98/239 (41%), Gaps = 46/239 (19%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEV 1384
YQ L+ +G GI + Y A N AIK S Q K E +
Sbjct: 64 YQNLKPIGSG-------AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVL 114
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD 1436
M+ + H+N+ +L+ + PQ +LE++ L N I+ LD
Sbjct: 115 MKCVNHKNII------------SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD 162
Query: 1437 ------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
++ + C +++LH S IIH DLKPSN+++ D + DFG+A+ S
Sbjct: 163 HERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTS 217
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
T + T Y APE + D++S G +M E + + +F G + W
Sbjct: 218 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 272
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 116
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH +L+ + PQ +LE+ +L N+ Q + + +D + YL
Sbjct: 117 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQMLC 175
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPE 233
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E K+ +F G + +W
Sbjct: 234 VILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 272
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 92 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 195
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLT 220
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 86
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 87 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 140 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 192
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 97 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 200
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLT 225
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 91
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 92 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 145 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 197
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 95 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 198
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLT 223
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 89
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 90 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 143 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 195
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 110 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 213
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLT 238
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 104
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 105 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 158 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 210
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.5 bits (132), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F +G GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
LVK+ S ++ +++EY P G + +SH + A + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+++D ++DFG++K + G +T L T Y+APE
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 212 SKGYNKAVDWWALGVLIYE 230
Score = 54.3 bits (129), Expect = 6e-07, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y P G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+++D + DFG+AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 834 HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK- 892
+K + ++ + VA +E+L IH DL N+LL ++ V + DFG+++
Sbjct: 192 YKEPITMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARD 248
Query: 893 LLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+ D V + T +MAPE + I ST DV+S+G+L+ E F+
Sbjct: 249 IYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 1429 LNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLDG 1487
+ +E + VA +E+L S IH DL N+LL ++ V + DFG+A+ +
Sbjct: 196 ITMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKN 252
Query: 1488 VDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
D +++ T + +MAPE + I ST DV+S+G+L+ E +
Sbjct: 253 PDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 15/219 (6%)
Query: 157 MCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELMELY 216
+C+ S D SS ++T +PS++ + K+L + N+L+ + LT+L LY
Sbjct: 11 VCSCNNNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLY 67
Query: 217 LNGNNLQGEFPPTIFN-VSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMTTGRI 275
LN N LQ P IF + +L + + +N L +LP+ + +L +L EL L
Sbjct: 68 LNDNKLQ-TLPAGIFKELKNLETLWVTDNKL-QALPIGVFDQLVNLAELRLDRNQLKSLP 125
Query: 276 PKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSST 335
P+ + T L YL L G N L L + ++++ ++LY N L +P
Sbjct: 126 PRVFDSLTKLTYLSL--------GYNELQSLPKGVFDKLTSLKELRLYNNQLK-RVPEGA 176
Query: 336 GINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRN 374
L L L L N L V + + KL +L+L N
Sbjct: 177 FDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 76/200 (38%), Gaps = 15/200 (7%)
Query: 327 LSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGN 386
+ N+P+ T +L L N LS + + +KL +L L+ N L A F
Sbjct: 31 IPSNIPADTK-------KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKE 83
Query: 387 CRQLQILNLAYSQLAXXXXXXXXXXXXXXXNCRYLRYLAIQTNPWKGILPNSVGNLSKSL 446
+ L+ L + ++L L L + N K + P +L+K L
Sbjct: 84 LKNLETLWVTDNKLQALPIGVFDQLVN-------LAELRLDRNQLKSLPPRVFDSLTK-L 135
Query: 447 EYFYAGSCELGGGIPAEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQG 506
Y G EL F L+++ L LY NQL KL L+ L L N ++
Sbjct: 136 TYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR 195
Query: 507 SIPSELCQLESLNTLLLQGN 526
LE L L LQ N
Sbjct: 196 VPEGAFDSLEKLKMLQLQEN 215
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Query: 421 LRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELGGGIPAEFGNLSNIIALSLYQNQL 480
LR L + N + LP + K+LE + +L F L N+ L L +NQL
Sbjct: 63 LRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQL 121
Query: 481 ASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLLQGNALQNQIP 533
S P L L L L YN +Q +L SL L L N L+ ++P
Sbjct: 122 KSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK-RVP 173
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 112 LSFLVSLNISGNRFHGTLP----NELWLMPRLRIIDLSSNRISGNLFDDMCNSLTELESF 167
L+ L L ++ N+ TLP EL + L + D + +FD + N L EL
Sbjct: 60 LTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVN-LAELR-- 115
Query: 168 DVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNI-GNLTELMELYLNGNNLQGEF 226
+ NQ+ P +KL LS+ +NEL +P+ + LT L EL L N L+
Sbjct: 116 -LDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFDKLTSLKELRLYNNQLK-RV 172
Query: 227 PPTIFN-VSSLRVIVLANNSLFGSLPVDLCRRLPSLQELNLR----DCMTTGRI 275
P F+ ++ L+ + L NN L +P L L+ L L+ DC G I
Sbjct: 173 PEGAFDKLTELKTLKLDNNQL-KRVPEGAFDSLEKLKMLQLQENPWDCTCNGII 225
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 24/186 (12%)
Query: 993 KRLSISVNKITGTIPRTVGNLTELRELHLHGNNLEAYLYNNKFTGRIPQNLGNCTLLNFL 1052
K+L + NK++ + LT+LR L+L+ N L+ I + L N L L
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT------LPAGIFKELKN---LETL 90
Query: 1053 ILRQNQLTG--------------VRLASNKLIGRIPSMIFNNSNIEAIQLYGNHFSGHLP 1098
+ N+L +RL N+L P + + + + + L N LP
Sbjct: 91 WVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LP 149
Query: 1099 SSIGPYLPNLQGLILWGNNLSGIIPSSICNASQVILLGLSENLFSGLIPNTFGNCRQLQI 1158
+ L +L+ L L+ N L + + +++ L L N + F + +L++
Sbjct: 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKM 209
Query: 1159 LDLSLN 1164
L L N
Sbjct: 210 LQLQEN 215
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 39/222 (17%)
Query: 1344 GTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
GI + Y A N AIK S Q K E +M+ + H+N+ +++
Sbjct: 29 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV-- 84
Query: 1402 NPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD------IMIDVACALEY 1447
+ PQ +LE++ L N I+ LD ++ + C +++
Sbjct: 85 ----------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 134
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
LH S IIH DLKPSN+++ D + DFG+A+ S T + T Y APE
Sbjct: 135 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEV 189
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
+ D++S G +M E + + +F G + W
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 227
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 71
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH +L+ + PQ +LE+ +L N+ Q + + +D + YL
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQMLC 130
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPE 188
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E K+ +F G + +W
Sbjct: 189 VILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 227
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 39/222 (17%)
Query: 1344 GTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
GI + Y A N AIK S Q K E +M+ + H+N+ +++
Sbjct: 30 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV-- 85
Query: 1402 NPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD------IMIDVACALEY 1447
+ PQ +LE++ L N I+ LD ++ + C +++
Sbjct: 86 ----------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
LH S IIH DLKPSN+++ D + DFG+A+ S T + T Y APE
Sbjct: 136 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEV 190
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
+ D++S G +M E + + +F G + W
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 228
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 72
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH +L+ + PQ +LE+ +L N+ Q + + +D + YL
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQMLC 131
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPE 189
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E K+ +F G + +W
Sbjct: 190 VILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 228
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 20/204 (9%)
Query: 742 LTDGFSESNLIGAGSFGSVY----KATLPYGMNVAIKVFN---LQLDGAIKSFDAECEVL 794
+D + ++G GSFG V K T G A+KV + ++ +S E ++L
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKIT---GQECAVKVISKRQVKQKTDKESLLREVQLL 80
Query: 795 RRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASAL 854
+++ H N+ K+ + G+ L+ E G L + S K + I+ V S +
Sbjct: 81 KQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGI 139
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
Y H ++H DLKP N+LL+ D + DFG+S E S + T Y
Sbjct: 140 TYXHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKXKDKIGTAYY 194
Query: 912 MAPEYGSEGIVSTCGDVYSFGILM 935
+APE C DV+S G+++
Sbjct: 195 IAPEVLHGTYDEKC-DVWSTGVIL 217
Score = 53.5 bits (127), Expect = 1e-06, Method: Composition-based stats.
Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 38/284 (13%)
Query: 1334 TNGFSESNLLGTGIFSSVY----KATFADGTNAAIKIFS---LQEDRALKSFDAECEVMR 1386
++ + +LG G F V K T G A+K+ S +++ +S E ++++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT---GQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 1387 RIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALE 1446
++ H N+ K+ + G+ L+ + G L + S ++ I+ V +
Sbjct: 82 QLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGIT 140
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
Y H+ I+H DLKP N+LL+ D + DFG++ + S K + T Y+
Sbjct: 141 YXHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKXKDKIGTAYYI 195
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVID 1563
APE G DV+S G+++ L+ P + ++ K VE+
Sbjct: 196 APEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK--VEK----------- 241
Query: 1564 ANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDAL 1607
G+ ++ KK S L K +P R++ +DAL
Sbjct: 242 -----GKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDAL 280
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 39/222 (17%)
Query: 1344 GTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
GI + Y A N AIK S Q K E +M+ + H+N+ +++
Sbjct: 30 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV-- 85
Query: 1402 NPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD------IMIDVACALEY 1447
+ PQ +LE++ L N I+ LD ++ + C +++
Sbjct: 86 ----------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
LH S IIH DLKPSN+++ D + DFG+A+ S T + T Y APE
Sbjct: 136 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEV 190
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
+ D++S G +M E + + +F G + W
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 228
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 72
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH +L+ + PQ +LE+ +L N+ Q + + +D + YL
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQMLC 131
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPE 189
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E K+ +F G + +W
Sbjct: 190 VILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 228
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 98/239 (41%), Gaps = 46/239 (19%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEV 1384
YQ L+ +G GI + Y A N AIK S Q K E +
Sbjct: 26 YQNLKPIGSG-------AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD 1436
M+ + H+N+ +++ + PQ +LE++ L N I+ LD
Sbjct: 77 MKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD 124
Query: 1437 ------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
++ + C +++LH S IIH DLKPSN+++ D + DFG+A+ S
Sbjct: 125 HERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTS 179
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
T + T Y APE + D++S G +M E + + +F G + W
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 78
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH +L+ + PQ +LE+ +L N+ Q + + +D + YL
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQMLC 137
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPE 195
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E K+ +F G + +W
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment Of
Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment Of
Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 98/239 (41%), Gaps = 46/239 (19%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEV 1384
YQ L+ +G GI + Y A N AIK S Q K E +
Sbjct: 27 YQNLKPIGSG-------AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVL 77
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD 1436
M+ + H+N+ +L+ + PQ +LE++ L N I+ LD
Sbjct: 78 MKCVNHKNII------------SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD 125
Query: 1437 ------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
++ + C +++LH S IIH DLKPSN+++ D + DFG+A+ S
Sbjct: 126 HERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTS 180
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
T + T Y APE + D++S G +M E + + +F G + W
Sbjct: 181 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 235
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 79
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH +L+ + PQ +LE+ +L N+ Q + + +D + YL
Sbjct: 80 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQMLC 138
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPE 196
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E K+ +F G + +W
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 235
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp
Length = 423
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 98/239 (41%), Gaps = 46/239 (19%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEV 1384
YQ L+ +G GI + Y A N AIK S Q K E +
Sbjct: 64 YQNLKPIGSG-------AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVL 114
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD 1436
M+ + H+N+ +L+ + PQ +LE++ L N I+ LD
Sbjct: 115 MKCVNHKNII------------SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD 162
Query: 1437 ------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
++ + C +++LH S IIH DLKPSN+++ D + DFG+A+ S
Sbjct: 163 HERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTS 217
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
T + T Y APE + D++S G +M E + + +F G + W
Sbjct: 218 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 272
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 116
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH +L+ + PQ +LE+ +L N+ Q + + +D + YL
Sbjct: 117 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQMLC 175
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPE 233
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E K+ +F G + +W
Sbjct: 234 VILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 272
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 98/239 (41%), Gaps = 46/239 (19%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEV 1384
YQ L+ +G GI + Y A N AIK S Q K E +
Sbjct: 27 YQNLKPIGSG-------AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVL 77
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD 1436
M+ + H+N+ +++ + PQ +LE++ L N I+ LD
Sbjct: 78 MKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD 125
Query: 1437 ------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
++ + C +++LH S IIH DLKPSN+++ D + DFG+A+ S
Sbjct: 126 HERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTS 180
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
T + T Y APE + D++S G +M E + + +F G + W
Sbjct: 181 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 235
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 79
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH +L+ + PQ +LE+ +L N+ Q + + +D + YL
Sbjct: 80 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQMLC 138
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPE 196
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E K+ +F G + +W
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 235
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From The
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From The
Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 100/205 (48%), Gaps = 14/205 (6%)
Query: 1343 LGTGIFSSVYKATFADGTN-AAIKIFSLQEDRALKSFDAECEV--MRRIRHRNLAKIVSS 1399
+G G + +V+KA + A+K L +D A E+ ++ ++H+N+ ++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHC 1459
+ L+ ++ Q L+K+ S N L+ E + + L + H S +++H
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHR 125
Query: 1460 DLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--YGSEGIVSTSG 1517
DLKP N+L++ + L +FG+A+ G+ + + T+ Y P+ +G++ + STS
Sbjct: 126 DLKPQNLLINRNGELKLANFGLARAF-GIPVRCYSAEVVTLWYRPPDVLFGAK-LYSTSI 183
Query: 1518 DVYSFGILMMETLTRRKPTDDMFTG 1542
D++S G + E +P +F G
Sbjct: 184 DMWSAGCIFAELANAGRP---LFPG 205
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 11/191 (5%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD--GAIKSFDAECEVLRRVRHRNLVKIISS 808
IG G++G+V+KA VA+K L D G S E +L+ ++H+N+V++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 809 CSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHC 868
+ L+ E+ Q L+K+ S L+ + + + L + H + V+H
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHR 125
Query: 869 DLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE--YGSEGIVSTCG 926
DLKP N+L++ + L++FG+++ G + + T Y P+ +G++ + ST
Sbjct: 126 DLKPQNLLINRNGELKLANFGLARAF-GIPVRCYSAEVVTLWYRPPDVLFGAK-LYSTSI 183
Query: 927 DVYSFGILMIE 937
D++S G + E
Sbjct: 184 DMWSAGCIFAE 194
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole
Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 98/239 (41%), Gaps = 46/239 (19%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEV 1384
YQ L+ +G GI + Y A N AIK S Q K E +
Sbjct: 25 YQNLKPIGSG-------AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVL 75
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD 1436
M+ + H+N+ +++ + PQ +LE++ L N I+ LD
Sbjct: 76 MKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD 123
Query: 1437 ------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
++ + C +++LH S IIH DLKPSN+++ D + DFG+A+ S
Sbjct: 124 HERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTS 178
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
T + T Y APE + D++S G +M E + + +F G + W
Sbjct: 179 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 233
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 31 IGSGAQGIVCAAYDAVL--DRNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 77
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH +L+ + PQ +LE+ +L N+ Q + + +D + YL
Sbjct: 78 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQMLC 136
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 137 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPE 194
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E K+ +F G + +W
Sbjct: 195 VILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 233
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A 1-Aryl-3,4-
Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
Length = 364
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 98/239 (41%), Gaps = 46/239 (19%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEV 1384
YQ L+ +G GI + Y A N AIK S Q K E +
Sbjct: 26 YQNLKPIGSG-------AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD 1436
M+ + H+N+ +++ + PQ +LE++ L N I+ LD
Sbjct: 77 MKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD 124
Query: 1437 ------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
++ + C +++LH S IIH DLKPSN+++ D + DFG+A+ S
Sbjct: 125 HERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTS 179
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
T + T Y APE + D++S G +M E + + +F G + W
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 78
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH +L+ + PQ +LE+ +L N+ Q + + +D + YL
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLYQMLC 137
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPE 195
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E K+ +F G + +W
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 4e-07, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F +G GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
LVK+ S ++ +++EY P G + +SH + A + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+++D ++DFG++K + G +T L T Y+APE
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 212 SKGYNKAVDWWALGVLIYE 230
Score = 53.9 bits (128), Expect = 8e-07, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y P G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+++D + DFG+AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 54.7 bits (130), Expect = 4e-07, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F +G GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
LVK+ S ++ +++EY P G + +SH + A + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+++D ++DFG +K + G +T L T Y+APE
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 212 SKGYNKAVDWWALGVLIYE 230
Score = 53.5 bits (127), Expect = 9e-07, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y P G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+++D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 54.7 bits (130), Expect = 4e-07, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 25/219 (11%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFDA--ECEVLRRVRHRNLVKII-- 806
+G+G++GSV A G VAIK + I + A E +L+ ++H N++ ++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 807 ----SSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
SS N L++ +M Q L+K + IQ ++ + L+Y+H
Sbjct: 110 FTPASSLRNFYDFYLVMPFM-QTDLQKIMGMEFSEEKIQY---LVYQMLKGLKYIHSAG- 164
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGI- 921
V+H DLKP N+ +++D + DFG+++ D E T + T Y APE +
Sbjct: 165 --VVHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMH 218
Query: 922 VSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
+ D++S G +M E T K +F G+ L + +
Sbjct: 219 YNQTVDIWSVGCIMAEMLTGKT----LFKGKDYLDQLTQ 253
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 42/260 (16%)
Query: 1343 LGTGIFSSVYKATFA-DGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIV-- 1397
+G+G + SV A G AIK S Q + K E +++ ++H N+ ++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 1398 ----SSCSNPGFKALILQYMPQGSLEKWL---YSHNYLLNIEQRLDIMI-DVACALEYLH 1449
SS N L++ +M Q L+K + +S E+++ ++ + L+Y+H
Sbjct: 110 FTPASSLRNFYDFYLVMPFM-QTDLQKIMGMEFS-------EEKIQYLVYQMLKGLKYIH 161
Query: 1450 QGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGS 1509
S ++H DLKP N+ +++D + DFG+A+ D + T + T Y APE
Sbjct: 162 ---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA----EMTGYVVTRWYRAPEVIL 214
Query: 1510 EGI-VSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAVTDVIDANLLS 1568
+ + + D++S G +M E LT + +F G+ L D +T ++ +
Sbjct: 215 SWMHYNQTVDIWSVGCIMAEMLTGKT----LFKGKDYL---------DQLTQILKVTGVP 261
Query: 1569 GEEEADIAAKKKCMSSVMSL 1588
G E K S + SL
Sbjct: 262 GTEFVQKLNDKAAKSYIQSL 281
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 96 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 199
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLT 224
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 90
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 91 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 196
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 54.7 bits (130), Expect = 5e-07, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 790 ECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMID 849
E VL+ + H N++K+ + L++E G L + H+ N I+
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEII-HRMKFNEVDAAVIIKQ 144
Query: 850 VASALEYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDGEDSVTQTMTL 906
V S + YLH + ++H DLKP N+LL+ D + + DFG+S + + + + + L
Sbjct: 145 VLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE--RL 199
Query: 907 ATFGYMAPEYGSEGIVSTCGDVYSFGILM 935
T Y+APE + C DV+S G+++
Sbjct: 200 GTAYYIAPEVLRKKYDEKC-DVWSIGVIL 227
Score = 48.1 bits (113), Expect = 4e-05, Method: Composition-based stats.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 15/200 (7%)
Query: 1343 LGTGIFSSVY----KATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVS 1398
LG+G + V K T + I+ S+ K + E V++ + H N+ K+
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE-EVAVLKLLDHPNIMKLYD 103
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIH 1458
+ L+++ G L + H N I+ V + YLH+ +I+H
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEII-HRMKFNEVDAAVIIKQVLSGVTYLHK---HNIVH 159
Query: 1459 CDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVST 1515
DLKP N+LL+ D + + DFG++ + + MK+ L T Y+APE +
Sbjct: 160 RDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE--RLGTAYYIAPEVLRKK-YDE 216
Query: 1516 SGDVYSFGILMMETLTRRKP 1535
DV+S G+++ L P
Sbjct: 217 KCDVWSIGVILFILLAGYPP 236
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 54.3 bits (129), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 790 ECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSL-EKWLYSHKYTLNIQQRLDIMI 848
E +L+ + H N++K+ + + L+ E+ G L E+ + HK+ + +IM
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF--DECDAANIMK 153
Query: 849 DVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTV---AHLSDFGISKLLDGEDSVTQTMT 905
+ S + YLH + ++H D+KP N+LL++ + DFG+S + +
Sbjct: 154 QILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRD--R 208
Query: 906 LATFGYMAPEYGSEGIVSTCGDVYSFGILM 935
L T Y+APE + C DV+S G++M
Sbjct: 209 LGTAYYIAPEVLKKKYNEKC-DVWSCGVIM 237
Score = 43.9 bits (102), Expect = 8e-04, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSL-EKWLYSHNYLLNIEQRLDIMI 1439
E +++ + H N+ K+ + + L+ ++ G L E+ + H + + +IM
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF--DECDAANIMK 153
Query: 1440 DVACALEYLHQGYSTSIIHCDLKPSNVLLDDD---MVAHLGDFGIAKLLDGVDSMKQTMT 1496
+ + YLH+ +I+H D+KP N+LL++ + + DFG++ K
Sbjct: 154 QILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS--KDYKLRDR 208
Query: 1497 LATIGYMAPEYGSEGIVSTSGDVYSFGILM 1526
L T Y+APE + + DV+S G++M
Sbjct: 209 LGTAYYIAPEVLKKK-YNEKCDVWSCGVIM 237
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 54.3 bits (129), Expect = 5e-07, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 108/250 (43%), Gaps = 44/250 (17%)
Query: 738 ELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIK-VFNLQLDGA---IKSFDAECE- 792
EL + ++ I +GS+G+V G+ VAIK VFN DG I S C+
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 793 VLRRVR------HRNLVKI------ISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
VLR +R H N++ + + H L+ E M + L + ++ + ++
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKL-YLVTELM-RTDLAQVIHDQRIVISP 133
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS- 899
Q M + L LH V+H DL P N+LL D+ + DF +++ ED+
Sbjct: 134 QHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR----EDTA 186
Query: 900 -VTQTMTLATFGYMAPEY-----GSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+T + Y APE G +V D++S G +M E F RK +F G T
Sbjct: 187 DANKTHYVTHRWYRAPELVMQFKGFTKLV----DMWSAGCVMAEMFNRK----ALFRGST 238
Query: 954 ---SLKKWVE 960
L K VE
Sbjct: 239 FYNQLNKIVE 248
Score = 39.7 bits (91), Expect = 0.014, Method: Composition-based stats.
Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 30/234 (12%)
Query: 1320 AALRRISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIK-IFSLQEDRALKSF 1378
AA+R + EL + ++ + +G + +V ++G AIK +F+ D +
Sbjct: 8 AAMRDL-IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNI 66
Query: 1379 DAE---CE-VMRRIR------HRN---LAKIVSSCSNPGFKALIL-QYMPQGSLEKWLYS 1424
++ C+ V+R IR H N L I P L L + + L + ++
Sbjct: 67 LSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD 126
Query: 1425 HNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKL 1484
+++ + M + L LH+ ++H DL P N+LL D+ + DF +A+
Sbjct: 127 QRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFNLAR- 182
Query: 1485 LDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSG-----DVYSFGILMMETLTRR 1533
D D+ K T + Y APE ++ G D++S G +M E R+
Sbjct: 183 EDTADANK-THYVTHRWYRAPEL----VMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 54.3 bits (129), Expect = 5e-07, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 108/250 (43%), Gaps = 44/250 (17%)
Query: 738 ELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIK-VFNLQLDGA---IKSFDAECE- 792
EL + ++ I +GS+G+V G+ VAIK VFN DG I S C+
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 793 VLRRVR------HRNLVKI------ISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
VLR +R H N++ + + H L+ E M + L + ++ + ++
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKL-YLVTELM-RTDLAQVIHDQRIVISP 133
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS- 899
Q M + L LH V+H DL P N+LL D+ + DF +++ ED+
Sbjct: 134 QHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR----EDTA 186
Query: 900 -VTQTMTLATFGYMAPEY-----GSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
+T + Y APE G +V D++S G +M E F RK +F G T
Sbjct: 187 DANKTHYVTHRWYRAPELVMQFKGFTKLV----DMWSAGCVMAEMFNRK----ALFRGST 238
Query: 954 ---SLKKWVE 960
L K VE
Sbjct: 239 FYNQLNKIVE 248
Score = 39.7 bits (91), Expect = 0.014, Method: Composition-based stats.
Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 30/234 (12%)
Query: 1320 AALRRISYQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIK-IFSLQEDRALKSF 1378
AA+R + EL + ++ + +G + +V ++G AIK +F+ D +
Sbjct: 8 AAMRDL-IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNI 66
Query: 1379 DAE---CE-VMRRIR------HRN---LAKIVSSCSNPGFKALIL-QYMPQGSLEKWLYS 1424
++ C+ V+R IR H N L I P L L + + L + ++
Sbjct: 67 LSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD 126
Query: 1425 HNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKL 1484
+++ + M + L LH+ ++H DL P N+LL D+ + DF +A+
Sbjct: 127 QRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFNLAR- 182
Query: 1485 LDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSG-----DVYSFGILMMETLTRR 1533
D D+ K T + Y APE ++ G D++S G +M E R+
Sbjct: 183 EDTADANK-THYVTHRWYRAPEL----VMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 25/208 (12%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIK--VFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG G+FG V+KA G VA+K + + +G + E ++L+ ++H N+V +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 809 CSNH--------GFKALILEYMPQ---GSLEKWLYSHKYTLNIQQRLDIMIDVASALEYL 857
C G L+ ++ G L L K+TL+ +R+ M+ L L
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV--KFTLSEIKRVMQML-----LNGL 138
Query: 858 HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK---LLDGEDSVTQTMTLATFGYMAP 914
++ H ++H D+K +NVL+ D V L+DFG+++ L + T Y P
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 915 E-YGSEGIVSTCGDVYSFGILMIETFTR 941
E E D++ G +M E +TR
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTR 226
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 25/208 (12%)
Query: 1343 LGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDA--ECEVMRRIRHRNLAKIVSS 1399
+G G F V+KA G A+K ++ ++ A E ++++ ++H N+ ++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 1400 CSNP--------GFKALILQYMPQ---GSLEKWLYSHNYLLNIEQRLDIMIDVACALEYL 1448
C G L+ + G L L L I++ + ++++ L Y+
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT-LSEIKRVMQMLLN---GLYYI 141
Query: 1449 HQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK---LLDGVDSMKQTMTLATIGYMAP 1505
H+ I+H D+K +NVL+ D V L DFG+A+ L + + T+ Y P
Sbjct: 142 HRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 1506 E-YGSEGIVSTSGDVYSFGILMMETLTR 1532
E E D++ G +M E TR
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.3 bits (129), Expect = 6e-07, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 82/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E + + +
Sbjct: 44 FERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPF 103
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++L+Y P G + L R + EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 215
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
Score = 52.8 bits (125), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 744 DGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRR 796
D F +G GSFG V +K T G + A+K+ + Q +K + E + +
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 797 VRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
V LVK+ S ++ ++LEY P G + +SH + A +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPE 915
+ H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCGTPEYLAPE 209
Query: 916 YGSEGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 210 IILSKGYNKAVDWWALGVLIYE 231
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 54.3 bits (129), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
Query: 846 IMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT 905
+ + + AL YL H VIH D+KPSN+LLD+ L DFGIS L D + +
Sbjct: 129 MTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRL--VDDKAKDRS 184
Query: 906 LATFGYMAPEY-----GSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
YMAPE ++ DV+S GI ++E T + P T L K ++
Sbjct: 185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ 244
Query: 961 E 961
E
Sbjct: 245 E 245
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 1437 IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT 1496
+ + + AL YL + + +IH D+KPSN+LLD+ L DFGI+ L VD + +
Sbjct: 129 MTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRL--VDDKAKDRS 184
Query: 1497 LATIGYMAPEY-----GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVE 1551
YMAPE ++ DV+S GI ++E T + P + T L ++
Sbjct: 185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ 244
Query: 1552 ESLP 1555
E P
Sbjct: 245 EEPP 248
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G VA+K + I K E +L+ ++H N++ ++
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 109 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 212
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLT 237
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 103
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 104 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 157 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 209
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 97/239 (40%), Gaps = 46/239 (19%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEV 1384
YQ L+ +G GI + Y A N AIK S Q K E +
Sbjct: 31 YQNLKPIGSG-------AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVL 81
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD 1436
M+ + H+N+ L+ + PQ SLE++ L N I+ LD
Sbjct: 82 MKCVNHKNII------------GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD 129
Query: 1437 ------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
++ + C +++LH S IIH DLKPSN+++ D + DFG+A+ S
Sbjct: 130 HERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTS 184
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
T + T Y APE + D++S G +M E + + +F G + W
Sbjct: 185 FMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQW 239
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 94/223 (42%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 37 IGSGAQGIVCAAYDAIL--ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 83
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH L+ + PQ SLE+ ++ N+ Q + + +D + YL
Sbjct: 84 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLYQMLC 142
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 143 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPE 200
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E K+ +F G + +W
Sbjct: 201 VILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQW 239
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 27/205 (13%)
Query: 1343 LGTGIFSSVYKA--TFADGTNAAIKIFSLQEDRALK-SFDAECEVMRRIRHRNLAKIVSS 1399
LG G + VYKA T + T A +I E+ + + E +++ ++HRN+ ++ S
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEY-----LHQGYST 1454
+ LI +Y + L+K++ ++ D+ + V + Y ++ +S
Sbjct: 102 IHHNHRLHLIFEYA-ENDLKKYM---------DKNPDVSMRVIKSFLYQLINGVNFCHSR 151
Query: 1455 SIIHCDLKPSNVLL-----DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY-- 1507
+H DLKP N+LL + V +GDFG+A+ G+ + T + T+ Y PE
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF-GIPIRQFTHEIITLWYRPPEILL 210
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTR 1532
GS STS D++S + E L +
Sbjct: 211 GSRH-YSTSVDIWSIACIWAEMLMK 234
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 103/250 (41%), Gaps = 47/250 (18%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLD--GAIKSFDAECEVLRRVRHR 800
D + +G G++G VYKA VAIK L+ + G + E +L+ ++HR
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEY---- 856
N++++ S ++ LI EY + L+K++ + D+ + V + Y
Sbjct: 94 NIIELKSVIHHNHRLHLIFEYA-ENDLKKYM---------DKNPDVSMRVIKSFLYQLIN 143
Query: 857 -LHHGHPTPVIHCDLKPSNVLL-----DDDTVAHLSDFGISKLLDGEDSVTQTMTLATFG 910
++ H +H DLKP N+LL + V + DFG+++ G T + T
Sbjct: 144 GVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF-GIPIRQFTHEIITLW 202
Query: 911 YMAPEY--GSEGIVSTCGDVYSFGILMIETFTRK--------------------MPTDEM 948
Y PE GS ST D++S + E + +P D
Sbjct: 203 YRPPEILLGSRH-YSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTT 261
Query: 949 FTGETSLKKW 958
+ G T+L W
Sbjct: 262 WPGVTALPDW 271
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + D+G+++ D E T +AT Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + D+G+A+ D D M T +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTD--DEM--TGYVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 6e-07, Method: Composition-based stats.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 34/222 (15%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K++
Sbjct: 32 IGSGAQGIVVAAYDAILE--RNVAIKKLS-------RPFQNQTHAKRAYRELVLMKVV-- 80
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMID-------VASALEY 856
NH L+ + PQ SLE+ ++ N+ Q + + +D + L
Sbjct: 81 --NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVG 138
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
+ H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 196
Query: 917 GSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G++M E + +F G + +W
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKGGV----LFPGTDHIDQW 234
Score = 53.5 bits (127), Expect = 8e-07, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 91/220 (41%), Gaps = 42/220 (19%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEV 1384
YQ L+ +G GI + Y A N AIK S Q K E +
Sbjct: 26 YQNLKPIGSG-------AQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD 1436
M+ + H+N+ L+ + PQ SLE++ L N I+ LD
Sbjct: 77 MKVVNHKNII------------GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD 124
Query: 1437 ------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S
Sbjct: 125 HERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG--TS 179
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETL 1530
T + T Y APE + D++S G++M E +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 6e-07, Method: Composition-based stats.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 34/222 (15%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K++
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLS-------RPFQNQTHAKRAYRELVLMKVV-- 80
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMID-------VASALEY 856
NH L+ + PQ SLE+ ++ N+ Q + + +D + L
Sbjct: 81 --NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVG 138
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
+ H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 196
Query: 917 GSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G++M E + +F G + +W
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKGGV----LFPGTDHIDQW 234
Score = 53.9 bits (128), Expect = 7e-07, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 91/220 (41%), Gaps = 42/220 (19%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEV 1384
YQ L+ +G GI + Y A N AIK S Q K E +
Sbjct: 26 YQNLKPIGSG-------AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD 1436
M+ + H+N+ L+ + PQ SLE++ L N I+ LD
Sbjct: 77 MKVVNHKNII------------GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD 124
Query: 1437 ------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S
Sbjct: 125 HERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG--TS 179
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETL 1530
T + T Y APE + D++S G++M E +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 54.3 bits (129), Expect = 6e-07, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F +G GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
LVK+ S ++ +++EY P G + +SH + A + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+++D ++DFG +K + G +T L T Y+APE
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 212 SKGYNKAVDWWALGVLIYE 230
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y P G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+++D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 90/180 (50%), Gaps = 22/180 (12%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKAL----ILQYMPQGSLEKWLYSHNYLLNIEQRLD 1436
E +++ R RH N+ I P + + ++ ++ L K L + + L+ +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH--LSNDHICY 148
Query: 1437 IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMT 1496
+ + L+Y+H S +++H DLKPSN+LL+ + DFG+A++ D +T
Sbjct: 149 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 205
Query: 1497 --LATIGYMAPEY--GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEE 1552
+AT Y APE S+G + S D++S G ++ E L+ R +F G KH++++
Sbjct: 206 EYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 256
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 26/225 (11%)
Query: 746 FSESNLIGAGSFGSVYKATLPYG-MNVAIKVFN-LQLDGAIKSFDAECEVLRRVRHRNLV 803
++ + IG G++G V A + VAIK + + + E ++L R RH N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 804 KIISSCSNHGFKALILEYMPQGSLEKWLY-SHKYTLNIQQRLD------IMIDVASALEY 856
I N +A +E M L L + Y L Q L + + L+Y
Sbjct: 105 GI-----NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKY 159
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMT--LATFGYMAP 914
+H + V+H DLKPSN+LL+ + DFG++++ D + T +T +AT Y AP
Sbjct: 160 IHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 915 EY--GSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKK 957
E S+G + D++S G ++ E + + +F G+ L +
Sbjct: 217 EIMLNSKGYTKSI-DIWSVGCILAEMLSNR----PIFPGKHYLDQ 256
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G VA+K + I K E +L+ ++H N++ ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 86 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 189
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLT 214
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 80
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 81 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 186
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G VA+K + I K E +L+ ++H N++ ++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 100 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 147
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 148 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 203
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 204 MLNWMHYNQTVDIWSVGCIMAELLT 228
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 94
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 95 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 147
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 148 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 200
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 25/208 (12%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIK--VFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG G+FG V+KA G VA+K + + +G + E ++L+ ++H N+V +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 809 CSNH--------GFKALILEYMPQ---GSLEKWLYSHKYTLNIQQRLDIMIDVASALEYL 857
C G L+ ++ G L L K+TL+ +R+ M+ L L
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV--KFTLSEIKRVMQML-----LNGL 138
Query: 858 HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK---LLDGEDSVTQTMTLATFGYMAP 914
++ H ++H D+K +NVL+ D V L+DFG+++ L + T Y P
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 915 E-YGSEGIVSTCGDVYSFGILMIETFTR 941
E E D++ G +M E +TR
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTR 226
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 25/208 (12%)
Query: 1343 LGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDA--ECEVMRRIRHRNLAKIVSS 1399
+G G F V+KA G A+K ++ ++ A E ++++ ++H N+ ++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 1400 CSNP--------GFKALILQYMPQ---GSLEKWLYSHNYLLNIEQRLDIMIDVACALEYL 1448
C G L+ + G L L L I++ + ++++ L Y+
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT-LSEIKRVMQMLLN---GLYYI 141
Query: 1449 HQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK---LLDGVDSMKQTMTLATIGYMAP 1505
H+ I+H D+K +NVL+ D V L DFG+A+ L + + T+ Y P
Sbjct: 142 HR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 1506 E-YGSEGIVSTSGDVYSFGILMMETLTR 1532
E E D++ G +M E TR
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G VA+K + I K E +L+ ++H N++ ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 110 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 213
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLT 238
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 104
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 105 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 158 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 210
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 47/249 (18%)
Query: 752 IGAGSFGSVYKATLPYG-------MNVAIKVFNLQLDGAIKSFDA---ECEVLRRV-RHR 800
+GAG+FG V +AT YG M VA+K+ L+ + +A E +VL + H
Sbjct: 47 LGAGAFGKVVEAT-AYGLIKSDAAMTVAVKM--LKPSAHLTEREALMSELKVLSYLGNHM 103
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI------------ 848
N+V ++ +C+ G +I EY G L +L + + + ++
Sbjct: 104 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 849 -----DVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS-VTQ 902
VA + +L + IH DL N+LL + + DFG+++ + + + V +
Sbjct: 164 LSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 903 TMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMFTGETSLK 956
+MAPE + + DV+S+GI + E F+ MP D F
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY------ 274
Query: 957 KWVEESLRL 965
K ++E R+
Sbjct: 275 KMIKEGFRM 283
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 37/234 (15%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATF-----ADGT-NAAIKIFS----LQEDRALKS 1377
+ N S LG G F V +AT +D A+K+ L E AL S
Sbjct: 32 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS 91
Query: 1378 FDAECEVMRRI-RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLY-SHNYLLNIEQRL 1435
E +V+ + H N+ ++ +C+ G +I +Y G L +L + + +
Sbjct: 92 ---ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP 148
Query: 1436 DIM----------------IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDF 1479
IM VA + +L S + IH DL N+LL + + DF
Sbjct: 149 AIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDF 205
Query: 1480 GIAKLL--DGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
G+A+ + D +K L + +MAPE + + DV+S+GI + E +
Sbjct: 206 GLARDIKNDSNYVVKGNARLP-VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 91/220 (41%), Gaps = 42/220 (19%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEV 1384
YQ L+ +G GI + Y A N AIK S Q K E +
Sbjct: 26 YQNLKPIGSG-------AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD 1436
M+ + H+N+ L+ + PQ SLE++ L N I+ LD
Sbjct: 77 MKCVNHKNII------------GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD 124
Query: 1437 ------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
++ + C +++LH S IIH DLKPSN+++ D + DFG+A+ S
Sbjct: 125 HERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTS 179
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETL 1530
T + T Y APE + D++S G +M E +
Sbjct: 180 FMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 78
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH L+ + PQ SLE+ ++ N+ Q + + +D + YL
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLYQMLC 137
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPEVVTRYYRAPE 195
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E + +F G + +W
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKGGV----LFPGTDHIDQW 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.9 bits (128), Expect = 7e-07, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F +G GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
LVK+ S ++ +++EY P G + +SH + A + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+++D ++DFG +K + G +T L T Y+APE
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 212 SKGYNKAVDWWALGVLIYE 230
Score = 53.5 bits (127), Expect = 9e-07, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y P G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+++D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 91/222 (40%), Gaps = 39/222 (17%)
Query: 1344 GTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
GI + Y A N AIK S Q K E +M+ + H+N+
Sbjct: 30 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII------- 80
Query: 1402 NPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD------IMIDVACALEY 1447
L+ + PQ SLE++ L N I+ LD ++ + C +++
Sbjct: 81 -----GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
LH S IIH DLKPSN+++ D + DFG+A+ S T + T Y APE
Sbjct: 136 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEV 190
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
+ D++S G +M E + + +F G + W
Sbjct: 191 ILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQW 228
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 94/223 (42%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 26 IGSGAQGIVCAAYDAIL--ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 72
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH L+ + PQ SLE+ ++ N+ Q + + +D + YL
Sbjct: 73 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLYQMLC 131
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPE 189
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E K+ +F G + +W
Sbjct: 190 VILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQW 228
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 18/198 (9%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIIS- 807
+G+G++GSV + + G+ +A+K + I K E +L+ ++H N++ ++
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 808 ---SCSNHGFKALIL-EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
+ S F + L ++ L + K T + Q L + + L+Y+H
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSAD-- 174
Query: 864 PVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGI-V 922
+IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE +
Sbjct: 175 -IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHY 229
Query: 923 STCGDVYSFGILMIETFT 940
+ D++S G +M E T
Sbjct: 230 NMTVDIWSVGCIMAELLT 247
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV + G A+K S Q K E +++ ++H N+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 113
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 114 -------GLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 166
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 167 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 219
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 53.9 bits (128), Expect = 7e-07, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 744 DGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRR 796
D F +G GSFG V +K T G + A+K+ + Q +K + E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 797 VRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEY 856
V LVK+ S ++ +++EY P G + +SH + A +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPE 915
+ H +I+ DLKP N+++D ++DFG +K + G +T L T Y+APE
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPE 209
Query: 916 YGSEGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 210 IILSKGYNKAVDWWALGVLIYE 231
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y P G + L R + EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+++D + DFG AK + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 215
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 47/249 (18%)
Query: 752 IGAGSFGSVYKATLPYG-------MNVAIKVFNLQLDGAIKSFDA---ECEVLRRV-RHR 800
+GAG+FG V +AT YG M VA+K+ L+ + +A E +VL + H
Sbjct: 31 LGAGAFGKVVEAT-AYGLIKSDAAMTVAVKM--LKPSAHLTEREALMSELKVLSYLGNHM 87
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI------------ 848
N+V ++ +C+ G +I EY G L +L + + + ++
Sbjct: 88 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 849 -----DVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQ 902
VA + +L + IH DL N+LL + + DFG+++ + + + V +
Sbjct: 148 LSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 903 TMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMFTGETSLK 956
+MAPE + + DV+S+GI + E F+ MP D F
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY------ 258
Query: 957 KWVEESLRL 965
K ++E R+
Sbjct: 259 KMIKEGFRM 267
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 37/234 (15%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATF-----ADGT-NAAIKIFS----LQEDRALKS 1377
+ N S LG G F V +AT +D A+K+ L E AL S
Sbjct: 16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS 75
Query: 1378 FDAECEVMRRI-RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLY-SHNYLLNIEQRL 1435
E +V+ + H N+ ++ +C+ G +I +Y G L +L + + +
Sbjct: 76 ---ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP 132
Query: 1436 DIM----------------IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDF 1479
IM VA + +L S + IH DL N+LL + + DF
Sbjct: 133 AIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDF 189
Query: 1480 GIAKLL--DGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
G+A+ + D +K L + +MAPE + + DV+S+GI + E +
Sbjct: 190 GLARDIKNDSNYVVKGNARLP-VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 47/249 (18%)
Query: 752 IGAGSFGSVYKATLPYG-------MNVAIKVFNLQLDGAIKSFDA---ECEVLRRV-RHR 800
+GAG+FG V +AT YG M VA+K+ L+ + +A E +VL + H
Sbjct: 54 LGAGAFGKVVEAT-AYGLIKSDAAMTVAVKM--LKPSAHLTEREALMSELKVLSYLGNHM 110
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI------------ 848
N+V ++ +C+ G +I EY G L +L + + + ++
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 849 -----DVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDS-VTQ 902
VA + +L + IH DL N+LL + + DFG+++ + + + V +
Sbjct: 171 LSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 903 TMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMFTGETSLK 956
+MAPE + + DV+S+GI + E F+ MP D F
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY------ 281
Query: 957 KWVEESLRL 965
K ++E R+
Sbjct: 282 KMIKEGFRM 290
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 37/234 (15%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATF-----ADGT-NAAIKIFS----LQEDRALKS 1377
+ N S LG G F V +AT +D A+K+ L E AL S
Sbjct: 39 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS 98
Query: 1378 FDAECEVMRRI-RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLY-SHNYLLNIEQRL 1435
E +V+ + H N+ ++ +C+ G +I +Y G L +L + + +
Sbjct: 99 ---ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP 155
Query: 1436 DIM----------------IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDF 1479
IM VA + +L S + IH DL N+LL + + DF
Sbjct: 156 AIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDF 212
Query: 1480 GIAKLL--DGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
G+A+ + D +K L + +MAPE + + DV+S+GI + E +
Sbjct: 213 GLARHIKNDSNYVVKGNARLP-VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 98/239 (41%), Gaps = 46/239 (19%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEV 1384
YQ L+ +G GI + Y A N AIK S Q K E +
Sbjct: 26 YQNLKPIGSG-------AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD 1436
M+ + H+N+ L+ + PQ SLE++ L N I+ LD
Sbjct: 77 MKCVNHKNII------------GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD 124
Query: 1437 ------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
++ + C +++LH S IIH DLKPSN+++ D + DFG+A+ G
Sbjct: 125 HERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSF 180
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
M + + T Y APE + D++S G +M E + + +F G + W
Sbjct: 181 MMEP-EVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKI----LFPGRDYIDQW 234
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 78
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH L+ + PQ SLE+ ++ N+ Q + + +D + YL
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLYQMLC 137
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S + T Y APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYRAPE 195
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E K+ +F G + +W
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVCHKI----LFPGRDYIDQW 234
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 113 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E +AT Y APE
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MXGYVATRWYRAPEI 216
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLT 241
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 107
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 108 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M +AT Y A
Sbjct: 161 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMXG--YVATRWYRA 213
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 25/208 (12%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIK--VFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG G+FG V+KA G VA+K + + +G + E ++L+ ++H N+V +I
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 809 CSNH--------GFKALILEYMPQ---GSLEKWLYSHKYTLNIQQRLDIMIDVASALEYL 857
C G L+ ++ G L L K+TL+ +R+ M+ L L
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV--KFTLSEIKRVMQML-----LNGL 137
Query: 858 HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK---LLDGEDSVTQTMTLATFGYMAP 914
++ H ++H D+K +NVL+ D V L+DFG+++ L + T Y P
Sbjct: 138 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 915 E-YGSEGIVSTCGDVYSFGILMIETFTR 941
E E D++ G +M E +TR
Sbjct: 198 ELLLGERDYGPPIDLWGAGCIMAEMWTR 225
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 25/208 (12%)
Query: 1343 LGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDA--ECEVMRRIRHRNLAKIVSS 1399
+G G F V+KA G A+K ++ ++ A E ++++ ++H N+ ++
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 1400 CSNP--------GFKALILQYMPQ---GSLEKWLYSHNYLLNIEQRLDIMIDVACALEYL 1448
C G L+ + G L L L I++ + ++++ L Y+
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT-LSEIKRVMQMLLN---GLYYI 140
Query: 1449 HQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK---LLDGVDSMKQTMTLATIGYMAP 1505
H+ I+H D+K +NVL+ D V L DFG+A+ L + + T+ Y P
Sbjct: 141 HR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 1506 E-YGSEGIVSTSGDVYSFGILMMETLTR 1532
E E D++ G +M E TR
Sbjct: 198 ELLLGERDYGPPIDLWGAGCIMAEMWTR 225
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-Phenyl-C-(4-(
9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (1-(9h-Purin-6-
Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (1-(9h-Purin-6-
Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.5 bits (127), Expect = 9e-07, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y P G + L R + EYLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 159
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+++D + DFG AK + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 215
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F +G GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
L K+ S ++ +++EY P G + +SH + A + +
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFYAAQIVLTFEY 157
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+++D ++DFG +K + G +T L T Y+APE
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 212
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 213 SKGYNKAVDWWALGVLIYE 231
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 25/208 (12%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIK--VFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG G+FG V+KA G VA+K + + +G + E ++L+ ++H N+V +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 809 CSNHG-----FKALIL------EYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYL 857
C KA I E+ G L L K+TL+ +R+ M+ L L
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV--KFTLSEIKRVMQML-----LNGL 138
Query: 858 HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK---LLDGEDSVTQTMTLATFGYMAP 914
++ H ++H D+K +NVL+ D V L+DFG+++ L + T Y P
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 915 E-YGSEGIVSTCGDVYSFGILMIETFTR 941
E E D++ G +M E +TR
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTR 226
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 25/208 (12%)
Query: 1343 LGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFDA--ECEVMRRIRHRNLAKIVSS 1399
+G G F V+KA G A+K ++ ++ A E ++++ ++H N+ ++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 1400 CSNPG-----FKA---LILQYMPQ---GSLEKWLYSHNYLLNIEQRLDIMIDVACALEYL 1448
C KA L+ + G L L L I++ + ++++ L Y+
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFT-LSEIKRVMQMLLN---GLYYI 141
Query: 1449 HQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK---LLDGVDSMKQTMTLATIGYMAP 1505
H+ I+H D+K +NVL+ D V L DFG+A+ L + + T+ Y P
Sbjct: 142 HR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 1506 E-YGSEGIVSTSGDVYSFGILMMETLTR 1532
E E D++ G +M E TR
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 47/249 (18%)
Query: 752 IGAGSFGSVYKATLPYG-------MNVAIKVFNLQLDGAIKSFDA---ECEVLRRV-RHR 800
+GAG+FG V +AT YG M VA+K+ L+ + +A E +VL + H
Sbjct: 54 LGAGAFGKVVEAT-AYGLIKSDAAMTVAVKM--LKPSAHLTEREALMSELKVLSYLGNHM 110
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI------------ 848
N+V ++ +C+ G +I EY G L +L + + + ++
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 849 -----DVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQ 902
VA + +L + IH DL N+LL + + DFG+++ + + + V +
Sbjct: 171 LSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 903 TMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMFTGETSLK 956
+MAPE + + DV+S+GI + E F+ MP D F
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY------ 281
Query: 957 KWVEESLRL 965
K ++E R+
Sbjct: 282 KMIKEGFRM 290
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 37/234 (15%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATF-----ADGT-NAAIKIFS----LQEDRALKS 1377
+ N S LG G F V +AT +D A+K+ L E AL S
Sbjct: 39 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS 98
Query: 1378 FDAECEVMRRI-RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLY-SHNYLLNIEQRL 1435
E +V+ + H N+ ++ +C+ G +I +Y G L +L + + +
Sbjct: 99 ---ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP 155
Query: 1436 DIM----------------IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDF 1479
IM VA + +L S + IH DL N+LL + + DF
Sbjct: 156 AIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDF 212
Query: 1480 GIAKLL--DGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
G+A+ + D +K L + +MAPE + + DV+S+GI + E +
Sbjct: 213 GLARDIKNDSNYVVKGNARLP-VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 115/245 (46%), Gaps = 29/245 (11%)
Query: 136 MPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSF 195
+ L+ + SSN+++ + N LT LE D+SSN+++ S L + L+ L +
Sbjct: 150 LTSLQQLSFSSNQVTD--LKPLAN-LTTLERLDISSNKVSD--ISVLAKLTNLESLIATN 204
Query: 196 NELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLC 255
N+++ P +G LT L EL LNGN L+ T+ ++++L + LANN + P+
Sbjct: 205 NQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPL--- 257
Query: 256 RRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTDFGANNLTGLIPSIIFNNS 315
L L EL L + P + T L L L +NQL D S I N
Sbjct: 258 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDI----------SPISNLK 305
Query: 316 NIEVIQLYGNHLSGNLPSSTGINLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNL 375
N+ + LY N++S P S+ L L RL+ N +S V SS+ N + + L N
Sbjct: 306 NLTYLTLYFNNISDISPVSS---LTKLQRLFFSNNKVSDV--SSLANLTNINWLSAGHNQ 360
Query: 376 FSGLV 380
S L
Sbjct: 361 ISDLT 365
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 135/363 (37%), Gaps = 94/363 (25%)
Query: 279 IGNCTLLNYLGLRDNQLTDFGA-NNLTGLIPSIIFNNSNIEVIQLYGNHLSGNLPSSTGI 337
+ N T +N+ +NQLTD NLT L+ I+ NN+ I I
Sbjct: 62 LNNLTQINF---SNNQLTDITPLKNLTKLV-DILMNNNQIADITPLA------------- 104
Query: 338 NLPNLLRLYLWGNNLSGVIPSSICNASKLTVLELSRNLFSGLVANTFGNCRQLQILNLAY 397
NL NL L L+ N ++ + P + N + L LELS N S + A LQ L+ +
Sbjct: 105 NLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISA--LSGLTSLQQLSFSS 160
Query: 398 SQLAXXXXXXXXXXXXXXXNCRYLRYLAIQTNPWKGILPNSVGNLSKSLEYFYAGSCELG 457
+Q+ N L L I +N I SV +LE A + ++
Sbjct: 161 NQVT---------DLKPLANLTTLERLDISSNKVSDI---SVLAKLTNLESLIATNNQIS 208
Query: 458 GGIPAEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLES 517
P G L+N+ LSL NQL T+ L NL LDL+ N I P L L
Sbjct: 209 DITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTK 262
Query: 518 LNTLLLQGNALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLEYILVVDFSLNLLS 577
L L L N + N P L+
Sbjct: 263 LTELKLGANQISNISP------------------------------------------LA 280
Query: 578 GCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGFQGSIPEAIGSLIS 637
G L LT L L+ NQL P I LK+LTYL L N P + SL
Sbjct: 281 G--------LTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTK 328
Query: 638 LEK 640
L++
Sbjct: 329 LQR 331
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 80/197 (40%), Gaps = 25/197 (12%)
Query: 464 FGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLNTLLL 523
NL+N+ L+L+ NQ+ P + L NL L+LS N I S S L L SL L
Sbjct: 103 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF 158
Query: 524 QGNALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLEYILVVDFSL---------- 573
N + + P + + +LE ++ + +
Sbjct: 159 SSNQVTDLKPLANLTTLERLDISSNKVSDISVL-AKLTNLESLIATNNQISDITPLGILT 217
Query: 574 NL----LSGCLPQDIGNLKVLTGLY---LSGNQLSCSIPSSIGGLKDLTYLALARNGFQG 626
NL L+G +DIG L LT L L+ NQ+S P + GL LT L L N
Sbjct: 218 NLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 275
Query: 627 SIPEA-IGSLISLEKGE 642
P A + +L +LE E
Sbjct: 276 ISPLAGLTALTNLELNE 292
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.5 bits (127), Expect = 9e-07, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 17/204 (8%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALK------SFDAECEVMRRIRHRNLAK 1395
LG+G+F+ V K + G A K + ++ + + E +++ I+H N+
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ N LIL+ + G L +L L E+ + + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 1456 IIHCDLKPSNVLLDDDMVA----HLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG 1511
I H DLKP N++L D V + DFG+A +D + K T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNYE 192
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
+ D++S G++ L+ P
Sbjct: 193 PLGLEADMWSIGVITYILLSGASP 216
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 14/173 (8%)
Query: 785 KSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRL 844
+ + E +L+ ++H N++ + N LILE + G L +L + K +L ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEAT 117
Query: 845 DIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA----HLSDFGISKLLDGEDSV 900
+ + + + + YLH + H DLKP N++L D V + DFG++ +D +
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 901 TQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
T ++APE + + D++S G++ + P F G+T
Sbjct: 175 KN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDT 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 38/218 (17%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMR 1386
YQ L+ +G GI + Y A N AIK S + F + R
Sbjct: 26 YQNLKPIGSG-------AQGIVCAAYDAILE--RNVAIKKLS-------RPFQNQTHAKR 69
Query: 1387 RIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD-- 1436
R L K+V+ + G L+ + PQ SLE++ L N I+ LD
Sbjct: 70 AYRELVLMKVVNHKNIIG---LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHE 126
Query: 1437 ----IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492
++ + C +++LH S IIH DLKPSN+++ D + DFG+A+ S
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFM 181
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETL 1530
T + T Y APE + D++S G +M E +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 34/222 (15%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K+++
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKVVNH 82
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------- 857
+ G L+ + PQ SLE+ ++ N+ Q + + +D + YL
Sbjct: 83 KNIIG---LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD-HERMSYLLYQMLCG 138
Query: 858 -HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEV 196
Query: 917 GSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E + +F G + +W
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGV----LFPGTDHIDQW 234
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 47/249 (18%)
Query: 752 IGAGSFGSVYKATLPYG-------MNVAIKVFNLQLDGAIKSFDA---ECEVLRRV-RHR 800
+GAG+FG V +AT YG M VA+K+ L+ + +A E +VL + H
Sbjct: 49 LGAGAFGKVVEAT-AYGLIKSDAAMTVAVKM--LKPSAHLTEREALMSELKVLSYLGNHM 105
Query: 801 NLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI------------ 848
N+V ++ +C+ G +I EY G L +L + + + ++
Sbjct: 106 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 849 -----DVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGEDSVTQ 902
VA + +L + IH DL N+LL + + DFG+++ + + + V +
Sbjct: 166 LSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 903 TMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT------RKMPTDEMFTGETSLK 956
+MAPE + + DV+S+GI + E F+ MP D F
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY------ 276
Query: 957 KWVEESLRL 965
K ++E R+
Sbjct: 277 KMIKEGFRM 285
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 37/234 (15%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATF-----ADGT-NAAIKIFS----LQEDRALKS 1377
+ N S LG G F V +AT +D A+K+ L E AL S
Sbjct: 34 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS 93
Query: 1378 FDAECEVMRRI-RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLY-SHNYLLNIEQRL 1435
E +V+ + H N+ ++ +C+ G +I +Y G L +L + + +
Sbjct: 94 ---ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP 150
Query: 1436 DIM----------------IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDF 1479
IM VA + +L S + IH DL N+LL + + DF
Sbjct: 151 AIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDF 207
Query: 1480 GIAKLL--DGVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
G+A+ + D +K L + +MAPE + + DV+S+GI + E +
Sbjct: 208 GLARDIKNDSNYVVKGNARLP-VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G VA+K + I K E +L+ ++H N++ ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 96 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 199
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLT 224
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 90
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 91 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y A
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWYRA 196
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 28/219 (12%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKV-----FNLQLDGAIKSFDAECEVLRRV 797
D + +IG G+F V + G A+K+ F + + E + +
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 798 RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA---- 853
+H ++V+++ + S+ G ++ E+M L I +R D + A
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADL---------CFEIVKRADAGFVYSEAVASH 134
Query: 854 -----LEYLHHGHPTPVIHCDLKPSNVLL---DDDTVAHLSDFGISKLLDGEDSVTQTMT 905
LE L + H +IH D+KP NVLL ++ L DFG++ L GE +
Sbjct: 135 YMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL-GESGLVAGGR 193
Query: 906 LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ T +MAPE DV+ G+++ + +P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
Score = 50.1 bits (118), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 28/208 (13%)
Query: 1342 LLGTGIFSSVYKATFAD-GTNAAIKI-----FSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++G G FS V + + G A+KI F+ + + E + ++H ++ +
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLD--IMIDVACALEYLHQ--- 1450
++ + S+ G ++ ++M L I +R D + A A Y+ Q
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADL---------CFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 1451 ----GYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
+ +IIH D+KP NVLL ++ LGDFG+A L G + + T +M
Sbjct: 142 ALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL-GESGLVAGGRVGTPHFM 200
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE DV+ G+++ L+
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLS 228
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 24/209 (11%)
Query: 739 LQRLTDGFSESNLIGAGSFGSVY--KATLPYGMNVAIKVFNLQLDGAIKSFDA---ECEV 793
Q L+D + +G+G++G V K L G AIK+ + A E V
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAV 74
Query: 794 LRRVRHRNLVKIISSCSNHGFKALILEYMPQGSL-EKWLYSHKYTLNIQQRLD---IMID 849
L+++ H N++K+ + L++E G L ++ + K++ +D IM
Sbjct: 75 LKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFS-----EVDAAVIMKQ 129
Query: 850 VASALEYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDGEDSVTQTMTL 906
V S YLH + ++H DLKP N+LL+ D + + DFG+S + + + L
Sbjct: 130 VLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE--RL 184
Query: 907 ATFGYMAPEYGSEGIVSTCGDVYSFGILM 935
T Y+APE + C DV+S G+++
Sbjct: 185 GTAYYIAPEVLRKKYDEKC-DVWSCGVIL 212
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 14/191 (7%)
Query: 1343 LGTGIFSSVY----KATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVS 1398
LG+G + V K T A+ IK S+ + E V++++ H N+ K+
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIH 1458
+ L+++ G L + ++ + IM V YLH+ +I+H
Sbjct: 89 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-IMKQVLSGTTYLHK---HNIVH 144
Query: 1459 CDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVST 1515
DLKP N+LL+ D + + DFG++ + MK+ L T Y+APE +
Sbjct: 145 RDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE--RLGTAYYIAPEVLRKK-YDE 201
Query: 1516 SGDVYSFGILM 1526
DV+S G+++
Sbjct: 202 KCDVWSCGVIL 212
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
++YLH + +IH DLK N+ L+DDM +GDFG+A ++ K+T+ T Y+
Sbjct: 154 GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC-GTPNYI 209
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
APE + S D++S G ++ L + P
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 847 MIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL 906
M ++YLH+ VIH DLK N+ L+DD + DFG++ ++ + +T+
Sbjct: 148 MRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC- 203
Query: 907 ATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLK 956
T Y+APE + S D++S G ++ K P + ET ++
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIR 253
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G VA+K + I K E +L+ ++H N++ ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTL---NIQQRLDIMIDVASALEY----- 856
+ P SLE+ +L +H NI + + D L Y
Sbjct: 86 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRG 133
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E T +AT Y APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 189
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLT 214
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 42/212 (19%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 80
Query: 1400 CSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACA--------------- 1444
L+ + P SLE+ ++ YL+ D+ V CA
Sbjct: 81 -------GLLDVFTPARSLEE--FNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQIL 131
Query: 1445 --LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGY 1502
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M T +AT Y
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--TGYVATRWY 184
Query: 1503 MAPEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
APE + + + D++S G +M E LT R
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein
Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein
Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 14/204 (6%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 179
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTL-ATIGYMAPEYGSEG 1511
S +I+ DLKP N+L+D + DFG AK + G T TL T Y+APE
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA-----TWTLCGTPEYLAPEIILSK 234
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPP 258
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 728 LATWRRISYQELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGA 783
L W S Q D F +G GSFG V +K + G + A+K+ + Q
Sbjct: 48 LKKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVK 102
Query: 784 IKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
+K + E +L+ V LVK+ S ++ +++EY+ G + +SH +
Sbjct: 103 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGR 158
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
A + + H +I+ DLKP N+L+D ++DFG +K + G
Sbjct: 159 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 214
Query: 901 TQTMTL-ATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
T TL T Y+APE + D ++ G+L+ E
Sbjct: 215 -ATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 251
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 22/218 (10%)
Query: 728 LATWRRISYQELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGA 783
L W S Q D F +G GSFG V +K + G + A+K+ + Q
Sbjct: 27 LKKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVK 81
Query: 784 IKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
+K + E +L+ V LVK+ S ++ +++EY+ G + +SH +
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGR 137
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
A + + H +I+ DLKP N+L+D ++DFG +K + G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 901 TQTMTLA-TFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+T LA T Y+APE + D ++ G+L+ E
Sbjct: 194 -RTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 14/204 (6%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLA-TIGYMAPEYGSEG 1511
S +I+ DLKP N+L+D + DFG AK + G +T LA T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLAGTPEYLAPEIILSK 213
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y P G + L R + EYLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+++D + DFG AK + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 215
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F +G GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
L K+ S ++ +++EY P G + +SH + A + +
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+++D ++DFG +K + G +T L T Y+APE
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 212
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 213 SKGYNKAVDWWALGVLIYE 231
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 18/233 (7%)
Query: 733 RISYQELQRLTDGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFN---LQLDGAIKSFD 788
R+ LQR D F +IG G+F V + G A+K+ N + G + F
Sbjct: 52 RLKEVRLQR--DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFR 109
Query: 789 AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI 848
E +VL R + ++ + + + L++EY G L L + + +
Sbjct: 110 EERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLA 169
Query: 849 DVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLAT 908
++ A++ +H +H D+KP N+LLD L+DFG L + +V + + T
Sbjct: 170 EIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGT 226
Query: 909 FGYMAPE--------YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
Y++PE G+ C D ++ G+ E F + P T ET
Sbjct: 227 PDYLSPEILQAVGGGPGTGSYGPEC-DWWALGVFAYEMFYGQTPFYADSTAET 278
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 9/187 (4%)
Query: 1325 ISYQELRLATNGFSESNLLGTGIFSSVYKATFAD-GTNAAIKI---FSLQEDRALKSFDA 1380
+ +E+RL + F ++G G FS V G A+KI + + + + F
Sbjct: 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFRE 110
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMID 1440
E +V+ R + ++ + + + L+++Y G L L + E + +
Sbjct: 111 ERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAE 170
Query: 1441 VACALEYLHQ-GYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT 1499
+ A++ +H+ GY +H D+KP N+LLD L DFG L +++ + + T
Sbjct: 171 IVMAIDSVHRLGY----VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGT 226
Query: 1500 IGYMAPE 1506
Y++PE
Sbjct: 227 PDYLSPE 233
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5-
Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)
Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-(5-Methyl-
1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With (1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y P G + L R + EYLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+++D + DFG AK + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 215
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F +G GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
L K+ S ++ +++EY P G + +SH + A + +
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+++D ++DFG +K + G +T L T Y+APE
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 212
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 213 SKGYNKAVDWWALGVLIYE 231
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The
Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The
Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 91/220 (41%), Gaps = 42/220 (19%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEV 1384
YQ L+ +G GI + Y A N AIK S Q K E +
Sbjct: 26 YQNLKPIGSG-------AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD 1436
M+ + H+N+ L+ + PQ SLE++ L N I+ LD
Sbjct: 77 MKCVNHKNII------------GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD 124
Query: 1437 ------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
++ + C +++LH S IIH DLKPSN+++ D + DFG+A+ S
Sbjct: 125 HERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTS 179
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETL 1530
T + T Y APE + D++S G +M E +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 78
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH L+ + PQ SLE+ ++ N+ Q + + +D + YL
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLYQMLC 137
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPE 195
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E + +F G + +W
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKGGV----LFPGTDHIDQW 234
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
++YLH + +IH DLK N+ L+DDM +GDFG+A ++ D ++ T Y+
Sbjct: 154 GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-FDGERKKXLCGTPNYI 209
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
APE + S D++S G ++ L + P
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 847 MIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTM 904
M ++YLH+ VIH DLK N+ L+DD + DFG++ + DGE +
Sbjct: 148 MRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKX 201
Query: 905 TLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLK 956
T Y+APE + S D++S G ++ K P + ET ++
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIR 253
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 91/220 (41%), Gaps = 42/220 (19%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEV 1384
YQ L+ +G GI + Y A N AIK S Q K E +
Sbjct: 27 YQNLKPIGSG-------AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVL 77
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD 1436
M+ + H+N+ L+ + PQ SLE++ L N I+ LD
Sbjct: 78 MKCVNHKNII------------GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD 125
Query: 1437 ------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
++ + C +++LH S IIH DLKPSN+++ D + DFG+A+ S
Sbjct: 126 HERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTS 180
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETL 1530
T + T Y APE + D++S G +M E +
Sbjct: 181 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 220
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 33 IGSGAQGIVCAAYDAIL--ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 79
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH L+ + PQ SLE+ ++ N+ Q + + +D + YL
Sbjct: 80 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLYQMLC 138
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPE 196
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E + +F G + +W
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMIKGGV----LFPGTDHIDQW 235
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 91/220 (41%), Gaps = 42/220 (19%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEV 1384
YQ L+ +G GI + Y A N AIK S Q K E +
Sbjct: 26 YQNLKPIGSG-------AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD 1436
M+ + H+N+ L+ + PQ SLE++ L N I+ LD
Sbjct: 77 MKCVNHKNII------------GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD 124
Query: 1437 ------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
++ + C +++LH S IIH DLKPSN+++ D + DFG+A+ S
Sbjct: 125 HERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTS 179
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETL 1530
T + T Y APE + D++S G +M E +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 78
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH L+ + PQ SLE+ ++ N+ Q + + +D + YL
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLYQMLC 137
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPE 195
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E + +F G + +W
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKGGV----LFPGTDHIDQW 234
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 52.8 bits (125), Expect = 2e-06, Method: Composition-based stats.
Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 22/239 (9%)
Query: 727 SLATWRRISYQELQRLTDGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNLQLDGAI- 784
+LA + S+ + D + IG G++G V A G VAIK D
Sbjct: 38 NLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTN 97
Query: 785 -KSFDAECEVLRRVRHRNLV---KIISSCSNHG-FKAL--ILEYMPQGSLEKWLYSHKYT 837
K E ++L+ +H N++ I+ +G FK++ +L+ M + L + ++S +
Sbjct: 98 AKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQ-P 155
Query: 838 LNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--- 894
L ++ + + L+Y+H VIH DLKPSN+L++++ + DFG+++ L
Sbjct: 156 LTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTS 212
Query: 895 DGEDSVTQTMTLATFGYMAPEYG-SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGE 952
E T +AT Y APE S + D++S G + E R+ ++F G+
Sbjct: 213 PAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR----QLFPGK 267
Score = 51.2 bits (121), Expect = 5e-06, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 1381 ECEVMRRIRHRNLAKIVS----SCSNPGFKAL--ILQYMPQGSLEKWLYSHNYLLNIEQR 1434
E ++++ +H N+ I + FK++ +L M + L + ++S + L +E
Sbjct: 104 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHS-SQPLTLEHV 161
Query: 1435 LDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQ- 1493
+ + L+Y+H S +IH DLKPSN+L++++ +GDFG+A+ L + Q
Sbjct: 162 RYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 218
Query: 1494 --TMTLATIGYMAPEYG-SEGIVSTSGDVYSFGILMMETLTRRK 1534
T +AT Y APE S + + D++S G + E L RR+
Sbjct: 219 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 52.8 bits (125), Expect = 2e-06, Method: Composition-based stats.
Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 22/239 (9%)
Query: 727 SLATWRRISYQELQRLTDGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNLQLDGAI- 784
+LA + S+ + D + IG G++G V A G VAIK D
Sbjct: 37 NLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTN 96
Query: 785 -KSFDAECEVLRRVRHRNLV---KIISSCSNHG-FKAL--ILEYMPQGSLEKWLYSHKYT 837
K E ++L+ +H N++ I+ +G FK++ +L+ M + L + ++S +
Sbjct: 97 AKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQ-P 154
Query: 838 LNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--- 894
L ++ + + L+Y+H VIH DLKPSN+L++++ + DFG+++ L
Sbjct: 155 LTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTS 211
Query: 895 DGEDSVTQTMTLATFGYMAPEYG-SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGE 952
E T +AT Y APE S + D++S G + E R+ ++F G+
Sbjct: 212 PAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR----QLFPGK 266
Score = 51.2 bits (121), Expect = 5e-06, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 1381 ECEVMRRIRHRNLAKIVS----SCSNPGFKAL--ILQYMPQGSLEKWLYSHNYLLNIEQR 1434
E ++++ +H N+ I + FK++ +L M + L + ++S + L +E
Sbjct: 103 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHS-SQPLTLEHV 160
Query: 1435 LDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQ- 1493
+ + L+Y+H S +IH DLKPSN+L++++ +GDFG+A+ L + Q
Sbjct: 161 RYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
Query: 1494 --TMTLATIGYMAPEYG-SEGIVSTSGDVYSFGILMMETLTRRK 1534
T +AT Y APE S + + D++S G + E L RR+
Sbjct: 218 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 21/195 (10%)
Query: 751 LIGAGSFGSVYK-ATLPYGMNVAIKVFNLQLDGAIKSFDA-----ECEVLRRVRHRNLVK 804
++G GSFG V K A+KV N + K+ D E E+L+++ H N++K
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVIN---KASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 805 IISSCSNHGFKALILEYMPQGSL-EKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
+ + ++ E G L ++ + +++ + R I+ V S + Y+H +
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITYMHKHN-- 141
Query: 864 PVIHCDLKPSNVLL---DDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEG 920
++H DLKP N+LL + D + DFG+S + + + T Y+APE
Sbjct: 142 -IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 921 IVSTCGDVYSFGILM 935
C DV+S G+++
Sbjct: 199 YDEKC-DVWSAGVIL 212
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 22/155 (14%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSL------EKWLYSHNYLLNIEQR 1434
E E+++++ H N+ K+ + ++ + G L K H+ I+Q
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ- 129
Query: 1435 LDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSM 1491
V + Y+H+ +I+H DLKP N+LL + D + DFG++ M
Sbjct: 130 ------VFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM 180
Query: 1492 KQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILM 1526
K + T Y+APE G DV+S G+++
Sbjct: 181 KD--RIGTAYYIAPEV-LRGTYDEKCDVWSAGVIL 212
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 39/222 (17%)
Query: 1344 GTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSSCS 1401
GI + Y A N AIK S Q K E +M+ + H+N+
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII------- 86
Query: 1402 NPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD------IMIDVACALEY 1447
L+ + PQ SLE++ L N I+ LD ++ + C +++
Sbjct: 87 -----GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 1448 LHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEY 1507
LH S IIH DLKPSN+++ D + DFG+A+ G M + + T Y APE
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMEP-EVVTRYYRAPEV 196
Query: 1508 GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHW 1549
+ D++S G +M E + + +F G + W
Sbjct: 197 ILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQW 234
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 78
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH L+ + PQ SLE+ ++ N+ Q + + +D + YL
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLYQMLC 137
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S + T Y APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYRAPE 195
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E K+ +F G + +W
Sbjct: 196 VILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQW 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 52.8 bits (125), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 14/199 (7%)
Query: 744 DGFSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFD---AECEVLRRVRH 799
D F +G GSFG V + G + A+K+ + Q +K + E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 800 RNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHH 859
LVK+ S ++ +++EY+ G + +SH + A + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 860 GHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL-ATFGYMAPEYGS 918
H +I+ DLKP N+L+D ++DFG +K + G +T L T Y+APE
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 919 EGIVSTCGDVYSFGILMIE 937
+ D ++ G+L+ E
Sbjct: 212 SKGYNKAVDWWALGVLIYE 230
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 52.8 bits (125), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 86/187 (45%), Gaps = 9/187 (4%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSF-DAECEVLRRVRHRNLVKIISSCS 810
+G G FG V++ + F +++ G + E +L RHRN++ + S
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKF-VKVKGTDQVLVKKEISILNIARHRNILHLHESFE 71
Query: 811 NHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDL 870
+ +I E++ + + + + + LN ++ + + V AL++LH + + H D+
Sbjct: 72 SMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDI 128
Query: 871 KPSNVLLDD--DTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDV 928
+P N++ + + +FG ++ L D+ T Y APE +VST D+
Sbjct: 129 RPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE--YYAPEVHQHDVVSTATDM 186
Query: 929 YSFGILM 935
+S G L+
Sbjct: 187 WSLGTLV 193
Score = 50.1 bits (118), Expect = 1e-05, Method: Composition-based stats.
Identities = 54/251 (21%), Positives = 107/251 (42%), Gaps = 31/251 (12%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMID 1440
E ++ RHRN+ + S + +I +++ + + + + + LN + + +
Sbjct: 51 EISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQ 110
Query: 1441 VACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLG--DFGIAKLLDGVDSMKQTMTLA 1498
V AL++LH S +I H D++P N++ + + +FG A+ L D+ + T
Sbjct: 111 VCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP 167
Query: 1499 TIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLKHWVEESLPDAV 1558
Y APE +VST+ D++S G L+ L+ P F E
Sbjct: 168 E--YYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP----FLAE--------------T 207
Query: 1559 TDVIDANLLSGEEEADIAAKKKCMSSVMSLALKCSEEIPEERMNVKDALAN------LKK 1612
I N+++ E D A K+ M + + + RM +AL + +++
Sbjct: 208 NQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIER 267
Query: 1613 IKTKFLKDVQQ 1623
+ TK ++ ++
Sbjct: 268 VSTKVIRTLKH 278
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G VA+K + I K E +L+ ++H N++ ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 110 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E +AT Y APE
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MXGXVATRWYRAPEI 213
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLT 238
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 104
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 105 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M +AT Y A
Sbjct: 158 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMXG--XVATRWYRA 210
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 34/224 (15%)
Query: 1331 RLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRH 1390
R+ F+ +LG G F V A GT I L++D ++ D EC ++ +
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLAD-RKGTEELYAIKILKKDVVIQDDDVECTMVEK--- 70
Query: 1391 RNLAKIVSSCSNPGFKA-------------LILQYMPQGSLEKWLYSHNYLLNIE--QRL 1435
++++ P F +++Y+ G L +Y + + Q +
Sbjct: 71 ----RVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL---MYHIQQVGKFKEPQAV 123
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK--LLDGVDSMKQ 1493
+++ L +LH+ II+ DLK NV+LD + + DFG+ K ++DGV + +
Sbjct: 124 FYAAEISIGLFFLHK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRE- 179
Query: 1494 TMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
T Y+APE + S D +++G+L+ E L + P D
Sbjct: 180 --FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 31/221 (14%)
Query: 741 RLTDGFSESNLIGAGSFGSVYKATLPYGMNV-AIKVFNLQLDGAIKSFDAEC-----EVL 794
+LTD F+ ++G GSFG V A + AIK+ L+ D I+ D EC VL
Sbjct: 17 KLTD-FNFLMVLGKGSFGKVMLADRKGTEELYAIKI--LKKDVVIQDDDVECTMVEKRVL 73
Query: 795 RRVRHRNLVKIISSCSNHGFKAL-----ILEYMPQGSLEKWLYSHKYTLNIQ--QRLDIM 847
+ + + SC F+ + ++EY+ G L +Y + + Q +
Sbjct: 74 ALLDKPPFLTQLHSC----FQTVDRLYFVMEYVNGGDL---MYHIQQVGKFKEPQAVFYA 126
Query: 848 IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK--LLDGEDSVTQTMT 905
+++ L +LH +I+ DLK NV+LD + ++DFG+ K ++DG VT
Sbjct: 127 AEISIGLFFLHK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG---VTTREF 180
Query: 906 LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTD 946
T Y+APE + D +++G+L+ E + P D
Sbjct: 181 CGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 97 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ E T +AT Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYVATRWYRAPEI 200
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLT 225
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 91
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 92 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D M T +AT Y A
Sbjct: 145 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEM--TGYVATRWYRA 197
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 89
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 145
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D+ + DFG AK + G + T Y+APE
Sbjct: 146 SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 201
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 202 YNKAVDWWALGVLIYEMAAGYPP 224
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 22/218 (10%)
Query: 728 LATWRRISYQELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGA 783
L W S Q D F +G GSFG V +K + G + A+K+ + Q
Sbjct: 14 LKKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVK 68
Query: 784 IKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
+K + E +L+ V LVK+ S ++ +++EY+ G + +SH +
Sbjct: 69 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGR 124
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
A + + H +I+ DLKP N+L+D+ ++DFG +K + G
Sbjct: 125 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG---- 180
Query: 901 TQTMTL-ATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+T L T Y+APE + D ++ G+L+ E
Sbjct: 181 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 217
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 97 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ E T +AT Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYVATRWYRAPEI 200
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLT 225
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 91
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 92 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D M T +AT Y A
Sbjct: 145 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEM--TGYVATRWYRA 197
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + FG+++ D E T +AT Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + FG+A+ D D M T +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTD--DEM--TGYVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 97 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ E T +AT Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYVATRWYRAPEI 200
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLT 225
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 91
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 92 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D M T +AT Y A
Sbjct: 145 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEM--TGYVATRWYRA 197
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 91/220 (41%), Gaps = 42/220 (19%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEV 1384
YQ L+ +G GI + Y A N AIK S Q K E +
Sbjct: 26 YQNLKPIGSG-------AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD 1436
M+ + H+N+ L+ + PQ SLE++ L N I+ LD
Sbjct: 77 MKCVNHKNII------------GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD 124
Query: 1437 ------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
++ + C +++LH S IIH DLKPSN+++ D + DFG+A+ S
Sbjct: 125 HERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTS 179
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETL 1530
T + T Y APE + D++S G +M E +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 78
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH L+ + PQ SLE+ ++ N+ Q + + +D + YL
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD-HERMSYLLYQMLC 137
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPE 195
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E + +F G + +W
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKGGV----LFPGTDHIDQW 234
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 91/220 (41%), Gaps = 42/220 (19%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEV 1384
YQ L+ +G GI + Y A N AIK S Q K E +
Sbjct: 26 YQNLKPIGSG-------AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD 1436
M+ + H+N+ L+ + PQ SLE++ L N I+ LD
Sbjct: 77 MKCVNHKNII------------GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD 124
Query: 1437 ------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
++ + C +++LH S IIH DLKPSN+++ D + DFG+A+ S
Sbjct: 125 HERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTS 179
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETL 1530
T + T Y APE + D++S G +M E +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 78
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH L+ + PQ SLE+ ++ N+ Q + + +D + YL
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD-HERMSYLLYQMLC 137
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPE 195
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E + +F G + +W
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKGGV----LFPGTDHIDQW 234
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E +AT Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVATRWYRAPEI 193
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--AGFVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E +AT Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVATRWYRAPEI 193
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--AGFVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 97
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 153
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 154 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 209
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 210 YNKAVDWWALGVLIYEMAAGYPP 232
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 728 LATWRRISYQELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGA 783
L W S Q D F +G GSFG V +K + G + A+K+ + Q
Sbjct: 22 LKKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVK 76
Query: 784 IKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
+K + E +L+ V LVK+ S ++ +++EY+ G + +SH +
Sbjct: 77 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGR 132
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
A + + H +I+ DLKP N+L+D ++DFG +K + G
Sbjct: 133 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 188
Query: 901 TQTMTL-ATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+T L T Y+APE + D ++ G+L+ E
Sbjct: 189 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 225
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein
Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 179
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 235
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPP 258
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 728 LATWRRISYQELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGA 783
L W S Q D F +G GSFG V +K + G + A+K+ + Q
Sbjct: 48 LKKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVK 102
Query: 784 IKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
+K + E +L+ V LVK+ S ++ +++EY+ G + +SH +
Sbjct: 103 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGR 158
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
A + + H +I+ DLKP N+L+D ++DFG +K + G
Sbjct: 159 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 214
Query: 901 TQTMTL-ATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+T L T Y+APE + D ++ G+L+ E
Sbjct: 215 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 251
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 728 LATWRRISYQELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGA 783
L W S Q D F +G GSFG V +K + G + A+K+ + Q
Sbjct: 27 LKKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVK 81
Query: 784 IKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
+K + E +L+ V LVK+ S ++ +++EY+ G + +SH +
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGR 137
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
A + + H +I+ DLKP N+L+D ++DFG +K + G
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 901 TQTMTL-ATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+T L T Y+APE + D ++ G+L+ E
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 728 LATWRRISYQELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGA 783
L W S Q D F +G GSFG V +K + G + A+K+ + Q
Sbjct: 27 LKKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVK 81
Query: 784 IKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
+K + E +L+ V LVK+ S ++ +++EY+ G + +SH +
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGR 137
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
A + + H +I+ DLKP N+L+D ++DFG +K + G
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 901 TQTMTL-ATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+T L T Y+APE + D ++ G+L+ E
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The Inhibited
State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 728 LATWRRISYQELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGA 783
L W S Q D F +G GSFG V +K + G + A+K+ + Q
Sbjct: 27 LKKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVK 81
Query: 784 IKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
+K + E +L+ V LVK+ S ++ +++EY+ G + +SH +
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGR 137
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
A + + H +I+ DLKP N+L+D ++DFG +K + G
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 901 TQTMTL-ATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+T L T Y+APE + D ++ G+L+ E
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 106/254 (41%), Gaps = 20/254 (7%)
Query: 704 LIIIFIRC----CTRNKNLPILENDSLSLATWRRISYQELQRLTDGFSESNLIGAGSFGS 759
LI ++ C R KN ILE + ++ L R + F +IG G+FG
Sbjct: 34 LICLYDECNNSPLRREKN--ILEYLEWAKPFTSKVKQMRLHR--EDFEILKVIGRGAFGE 89
Query: 760 VYKATLPYGMNV-AIKVFN---LQLDGAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFK 815
V L V A+K+ N + F E +VL + + + + +
Sbjct: 90 VAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNL 149
Query: 816 ALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNV 875
L+++Y G L L + L + + ++ A++ +H H +H D+KP N+
Sbjct: 150 YLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNI 206
Query: 876 LLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY-----GSEGIVSTCGDVYS 930
L+D + L+DFG L + +V ++ + T Y++PE G +G D +S
Sbjct: 207 LMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWS 266
Query: 931 FGILMIETFTRKMP 944
G+ M E + P
Sbjct: 267 LGVCMYEMLYGETP 280
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 102/250 (40%), Gaps = 23/250 (9%)
Query: 1328 QELRLATNGFSESNLLGTGIFSSVYKATFADGTNA-AIKIFSLQE--DRALKS-FDAECE 1383
+++RL F ++G G F V + A+KI + E RA + F E +
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 1384 VMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVAC 1443
V+ + + + + + L++ Y G L L L E + ++
Sbjct: 127 VLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVI 186
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
A++ +HQ + +H D+KP N+L+D + L DFG L +++ ++ + T Y+
Sbjct: 187 AIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYI 243
Query: 1504 APEY-----GSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK-------HWVE 1551
+PE G +G D +S G+ M E L P F E ++ H
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP----FYAESLVETYGKIMNHKER 299
Query: 1552 ESLPDAVTDV 1561
P VTDV
Sbjct: 300 FQFPTQVTDV 309
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
094
Length = 317
Score = 52.0 bits (123), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
++YLH + +IH DLK N+ L+DDM +GDFG+A ++ D ++ T Y+
Sbjct: 154 GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-FDGERKKDLCGTPNYI 209
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
APE + S D++S G ++ L + P
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 847 MIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL 906
M ++YLH+ VIH DLK N+ L+DD + DFG++ ++ + + +
Sbjct: 148 MRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC- 203
Query: 907 ATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLK 956
T Y+APE + S D++S G ++ K P + ET ++
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIR 253
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
562
Length = 301
Score = 52.0 bits (123), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
++YLH + +IH DLK N+ L+DDM +GDFG+A ++ D ++ T Y+
Sbjct: 138 GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-FDGERKKDLCGTPNYI 193
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLTRRKP 1535
APE + S D++S G ++ L + P
Sbjct: 194 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 847 MIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTL 906
M ++YLH+ VIH DLK N+ L+DD + DFG++ ++ + + +
Sbjct: 132 MRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC- 187
Query: 907 ATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLK 956
T Y+APE + S D++S G ++ K P + ET ++
Sbjct: 188 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIR 237
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G VA+K + I K E +L+ ++H N++ ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 86 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DFG+++ D E +AT Y APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVATRWYRAPEI 189
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLT 214
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 80
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 81 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DFG+A+ D D M +AT Y A
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEM--AGFVATRWYRA 186
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + D G+++ D E T +AT Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + D G+A+ D D M T +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTD--DEM--TGYVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With A
Peptide Inhibitor And Detergent
Length = 350
Score = 52.0 bits (123), Expect = 3e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
Score = 51.2 bits (121), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 728 LATWRRISYQELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGA 783
L W S Q D F +G GSFG V +K + G + A+K+ + Q
Sbjct: 27 LKKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVK 81
Query: 784 IKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
+K + E +L+ V LVK+ S ++ +++EY+ G + +SH +
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGR 137
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
A + + H +I+ DLKP N+L+D ++DFG +K + G
Sbjct: 138 FAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 901 TQTMTL-ATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+T L T Y+APE + D ++ G+L+ E
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + D G+++ D E T +AT Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + D G+A+ D D M T +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTD--DEM--TGYVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 742 LTDGFSESNLIGAGSFGSVY--KATLPYGMNVAIKVFNLQLDGAIKSFDA---ECEVLRR 796
L+D + +G+G++G V K L G AIK+ + A E VL++
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 797 VRHRNLVKIISSCSNHGFKALILEYMPQGSL-EKWLYSHKYTLNIQQRLD---IMIDVAS 852
+ H N++K+ + L++E G L ++ + K++ +D IM V S
Sbjct: 61 LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFS-----EVDAAVIMKQVLS 115
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDGEDSVTQTMTLATF 909
YLH + ++H DLKP N+LL+ D + + DFG+S + + + L T
Sbjct: 116 GTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE--RLGTA 170
Query: 910 GYMAPEYGSEGIVSTCGDVYSFGILM 935
Y+APE + C DV+S G+++
Sbjct: 171 YYIAPEVLRKKYDEKC-DVWSCGVIL 195
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 14/191 (7%)
Query: 1343 LGTGIFSSVY----KATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVS 1398
LG+G + V K T A+ IK S+ + E V++++ H N+ K+
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIH 1458
+ L+++ G L + ++ + IM V YLH+ +I+H
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-IMKQVLSGTTYLHK---HNIVH 127
Query: 1459 CDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVST 1515
DLKP N+LL+ D + + DFG++ + MK+ L T Y+APE +
Sbjct: 128 RDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE--RLGTAYYIAPEVLRKK-YDE 184
Query: 1516 SGDVYSFGILM 1526
DV+S G+++
Sbjct: 185 KCDVWSCGVIL 195
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 1331 RLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECE-VMRRI- 1388
R+ F+ +LG G F V + GT+ + L++D ++ D EC V +R+
Sbjct: 337 RMKLTDFNFLMVLGKGSFGKVMLSE-RKGTDELYAVKILKKDVVIQDDDVECTMVEKRVL 395
Query: 1389 ----RHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI--DVA 1442
+ L ++ S +++Y+ G L +Y + ++ + ++A
Sbjct: 396 ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAVFYAAEIA 452
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK--LLDGVDSMKQTMTLATI 1500
L +L S II+ DLK NV+LD + + DFG+ K + DGV + T
Sbjct: 453 IGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT---KXFCGTP 506
Query: 1501 GYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGE 1543
Y+APE + S D ++FG+L+ E L + P F GE
Sbjct: 507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP----FEGE 545
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 26/228 (11%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECE-VLR 795
++ +LTD F+ ++G GSFG V + G + V L+ D I+ D EC V +
Sbjct: 335 RDRMKLTD-FNFLMVLGKGSFGKVMLSERK-GTDELYAVKILKKDVVIQDDDVECTMVEK 392
Query: 796 RV-----RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI-- 848
RV + L ++ S ++EY+ G L +Y + ++ +
Sbjct: 393 RVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAVFYAA 449
Query: 849 DVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK--LLDGEDSVTQTMTL 906
++A L +L +I+ DLK NV+LD + ++DFG+ K + DG VT
Sbjct: 450 EIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---VTTKXFC 503
Query: 907 ATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMP-----TDEMF 949
T Y+APE + D ++FG+L+ E + P DE+F
Sbjct: 504 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF 551
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase
Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase
Catalytic Subunit
Length = 350
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLXGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 728 LATWRRISYQELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGA 783
L W S Q D F +G GSFG V +K + G + A+K+ + Q
Sbjct: 27 LKKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVK 81
Query: 784 IKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
+K + E +L+ V LVK+ S ++ +++EY+ G + +SH +
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGR 137
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
A + + H +I+ DLKP N+L+D ++DFG +K + G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 901 TQTMTL-ATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+T L T Y+APE + D ++ G+L+ E
Sbjct: 194 -RTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 215
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 728 LATWRRISYQELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGA 783
L W S Q D F +G GSFG V +K + G + A+K+ + Q
Sbjct: 28 LKKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVK 82
Query: 784 IKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
+K + E +L+ V LVK+ S ++ +++EY+ G + +SH +
Sbjct: 83 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGR 138
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
A + + H +I+ DLKP N+L+D ++DFG +K + G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 194
Query: 901 TQTMTL-ATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+T L T Y+APE + D ++ G+L+ E
Sbjct: 195 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-dependent
Protein Kinase Complexed With A Phosphorylated Substrate
Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase Catalytic
Subunit Alpha In Complex With Peptide Inhibitor Pki Alpha
(6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 728 LATWRRISYQELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGA 783
L W S Q D F +G GSFG V +K + G + A+K+ + Q
Sbjct: 27 LKKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVK 81
Query: 784 IKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
+K + E +L+ V LVK+ S ++ +++EY+ G + +SH +
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGR 137
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
A + + H +I+ DLKP N+L+D ++DFG +K + G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 901 TQTMTL-ATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+T L T Y+APE + D ++ G+L+ E
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 728 LATWRRISYQELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGA 783
L W S Q D F +G GSFG V +K + G + A+K+ + Q
Sbjct: 27 LKKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVK 81
Query: 784 IKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
+K + E +L+ V LVK+ S ++ +++EY+ G + +SH +
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGR 137
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
A + + H +I+ DLKP N+L+D ++DFG +K + G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 901 TQTMTL-ATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+T L T Y+APE + D ++ G+L+ E
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 728 LATWRRISYQELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGA 783
L W S Q D F +G GSFG V +K + G + A+K+ + Q
Sbjct: 27 LKKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVK 81
Query: 784 IKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
+K + E +L+ V LVK+ S ++ +++EY+ G + +SH +
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGR 137
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
A + + H +I+ DLKP N+L+D ++DFG +K + G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 901 TQTMTL-ATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+T L T Y+APE + D ++ G+L+ E
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent
Protein Kinase And Adenosine Further Defines
Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 728 LATWRRISYQELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGA 783
L W S Q D F +G GSFG V +K + G + A+K+ + Q
Sbjct: 27 LKKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVK 81
Query: 784 IKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
+K + E +L+ V LVK+ S ++ +++EY+ G + +SH +
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGR 137
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
A + + H +I+ DLKP N+L+D ++DFG +K + G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 901 TQTMTL-ATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+T L T Y+APE + D ++ G+L+ E
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 728 LATWRRISYQELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGA 783
L W S Q D F +G GSFG V +K + G + A+K+ + Q
Sbjct: 27 LKKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVK 81
Query: 784 IKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
+K + E +L+ V LVK+ S ++ +++EY+ G + +SH +
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGR 137
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
A + + H +I+ DLKP N+L+D ++DFG +K + G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 901 TQTMTL-ATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+T L T Y+APE + D ++ G+L+ E
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 90/220 (40%), Gaps = 42/220 (19%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFS--LQEDRALKSFDAECEV 1384
YQ L+ +G GI + Y A N AIK S Q K E +
Sbjct: 28 YQNLKPIGSG-------AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVL 78
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD 1436
M+ + H+N+ L+ + PQ SLE++ L N I+ LD
Sbjct: 79 MKCVNHKNII------------GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD 126
Query: 1437 ------IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDS 1490
++ + C +++LH S IIH DLKPSN+++ D + DFG+A+ S
Sbjct: 127 HERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTS 181
Query: 1491 MKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETL 1530
+ T Y APE + D++S G +M E +
Sbjct: 182 FMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 221
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 92/223 (41%), Gaps = 36/223 (16%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K
Sbjct: 34 IGSGAQGIVCAAYDAIL--ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 80
Query: 809 CSNH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------ 857
C NH L+ + PQ SLE+ ++ N+ Q + + +D + YL
Sbjct: 81 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLYQMLC 139
Query: 858 --HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE 915
H H +IH DLKPSN+++ D + DFG+++ S + T Y APE
Sbjct: 140 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMVPFVVTRYYRAPE 197
Query: 916 YGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E + +F G + +W
Sbjct: 198 VILGMGYKENVDIWSVGCIMGEMIKGGV----LFPGTDHIDQW 236
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 17/194 (8%)
Query: 1343 LGTGIFSSVYK-ATFADGTNAAIKIFSLQEDRALK------SFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K + G A K + ++ + + E +++ I+H N+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ N LIL+ + G L +L L E+ + + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 1456 IIHCDLKPSNVLLDDDMVA----HLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG 1511
I H DLKP N++L D V + DFG+A +D + K T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPAFVAPEIVNYE 192
Query: 1512 IVSTSGDVYSFGIL 1525
+ D++S G++
Sbjct: 193 PLGLEADMWSIGVI 206
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYK-ATLPYGMNVAIKVFNLQLDGAIK------SFDAECE 792
+ + D + +G+G F V K G+ A K + + + + E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+L+ ++H N++ + N LILE + G L +L + K +L ++ + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILN 125
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA----HLSDFGISKLLDGEDSVTQTMTLAT 908
+ YLH + H DLKP N++L D V + DFG++ +D + T
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGT 180
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGIL 934
++APE + + D++S G++
Sbjct: 181 PAFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 40/78 (51%)
Query: 1458 HCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSG 1517
H D+KP N+L+ D A+L DFGIA + T+ T+ Y APE SE +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 1518 DVYSFGILMMETLTRRKP 1535
D+Y+ ++ E LT P
Sbjct: 217 DIYALTCVLYECLTGSPP 234
Score = 50.8 bits (120), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 38/78 (48%)
Query: 867 HCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCG 926
H D+KP N+L+ D A+L DFGI+ E T+ T Y APE SE +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 927 DVYSFGILMIETFTRKMP 944
D+Y+ ++ E T P
Sbjct: 217 DIYALTCVLYECLTGSPP 234
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G+ VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + D G+++ D E T +AT Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + D G+A+ D D M T +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTD--DEM--TGYVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 23/220 (10%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++ +VYK N VA+K L+ + GA + E +L+ ++H N+V +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
L+ EY+ + L+++L +N+ + + L Y H V+H D
Sbjct: 70 HTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRD 125
Query: 870 LKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTM--TLATFGYMAPE--YGSEGIVSTC 925
LKP N+L+++ L+DFG+++ + T+T + T Y P+ GS ST
Sbjct: 126 LKPQNLLINERGELKLADFGLAR---AKSIPTKTYDNEVVTLWYRPPDILLGSTD-YSTQ 181
Query: 926 GDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
D++ G + E T + +F G T VEE L
Sbjct: 182 IDMWGVGCIFYEMATGR----PLFPGST-----VEEQLHF 212
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
Query: 1343 LGTGIFSSVYK--ATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSC 1400
LG G +++VYK + D A +I E+ A + E +++ ++H N+ +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
L+ +Y+ + L+++L ++N+ + + L Y H+ ++H D
Sbjct: 70 HTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRD 125
Query: 1461 LKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPE--YGSEGIVSTSGD 1518
LKP N+L+++ L DFG+A+ + + + T+ Y P+ GS ST D
Sbjct: 126 LKPQNLLINERGELKLADFGLAR-AKSIPTKTYDNEVVTLWYRPPDILLGSTD-YSTQID 183
Query: 1519 VYSFGILMMETLTRR 1533
++ G + E T R
Sbjct: 184 MWGVGCIFYEMATGR 198
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death
Associated Protein Kinase Catalytic Domain With Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death
Associated Protein Kinase Catalytic Domain
Length = 295
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALK------SFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K + G A K + ++ + + E +++ I+H N+
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ N LIL+ + G L +L L E+ + + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 1456 IIHCDLKPSNVLLDDDMVA----HLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG 1511
I H DLKP N++L D V + DFG+A +D + K T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNYE 192
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
+ D++S G++ L+ P
Sbjct: 193 PLGLEADMWSIGVITYILLSGASP 216
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 21/225 (9%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIK------SFDAECE 792
+ + D + +G+G F V K G+ A K + + + + E
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+L+ ++H N++ + N LILE + G L +L + K +L ++ + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILN 125
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA----HLSDFGISKLLDGEDSVTQTMTLAT 908
+ YLH + H DLKP N++L D V + DFG++ +D + T
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGT 180
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
++APE + + D++S G++ + P F G+T
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDT 221
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic Domain
Of Death-Associated Protein Kinase With Atp Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALK------SFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K + G A K + ++ + + E +++ I+H N+
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ N LIL+ + G L +L L E+ + + + + YLH S
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 133
Query: 1456 IIHCDLKPSNVLLDDDMVA----HLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG 1511
I H DLKP N++L D V + DFG+A +D + K T ++APE +
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNYE 191
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
+ D++S G++ L+ P
Sbjct: 192 PLGLEADMWSIGVITYILLSGASP 215
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 21/225 (9%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIK------SFDAECE 792
+ + D + +G+G F V K G+ A K + + + + E
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+L+ ++H N++ + N LILE + G L +L + K +L ++ + + + +
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILN 124
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA----HLSDFGISKLLDGEDSVTQTMTLAT 908
+ YLH + H DLKP N++L D V + DFG++ +D + T
Sbjct: 125 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGT 179
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
++APE + + D++S G++ + P F G+T
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDT 220
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALK------SFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K + G A K + ++ + + E +++ I+H N+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ N LIL+ + G L +L L E+ + + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 1456 IIHCDLKPSNVLLDDDMVA----HLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG 1511
I H DLKP N++L D V + DFG+A +D + K T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNYE 192
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
+ D++S G++ L+ P
Sbjct: 193 PLGLEADMWSIGVITYILLSGASP 216
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 21/225 (9%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIK------SFDAECE 792
+ + D + +G+G F V K G+ A K + + + + E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+L+ ++H N++ + N LILE + G L +L + K +L ++ + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILN 125
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA----HLSDFGISKLLDGEDSVTQTMTLAT 908
+ YLH + H DLKP N++L D V + DFG++ +D + T
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGT 180
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
++APE + + D++S G++ + P F G+T
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDT 221
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
Length = 278
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALK------SFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K + G A K + ++ + + E +++ I+H N+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ N LIL+ + G L +L L E+ + + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 1456 IIHCDLKPSNVLLDDDMVA----HLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG 1511
I H DLKP N++L D V + DFG+A +D + K T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNYE 192
Query: 1512 IVSTSGDVYSFGILMMETLTRRKP 1535
+ D++S G++ L+ P
Sbjct: 193 PLGLEADMWSIGVITYILLSGASP 216
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 21/225 (9%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIK------SFDAECE 792
+ + D + +G+G F V K G+ A K + + + + E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+L+ ++H N++ + N LILE + G L +L + K +L ++ + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILN 125
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA----HLSDFGISKLLDGEDSVTQTMTLAT 908
+ YLH + H DLKP N++L D V + DFG++ +D + T
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGT 180
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGET 953
++APE + + D++S G++ + P F G+T
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDT 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 21/195 (10%)
Query: 751 LIGAGSFGSVYKATLPYGMN-VAIKVFNLQLDGAIKSFDA-----ECEVLRRVRHRNLVK 804
++G GSFG V K A+KV N + K+ D E E+L+++ H N++K
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVIN---KASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 805 IISSCSNHGFKALILEYMPQGSL-EKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
+ + ++ E G L ++ + +++ + R I+ V S + Y+H +
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITYMHKHN-- 141
Query: 864 PVIHCDLKPSNVLL---DDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEG 920
++H DLKP N+LL + D + DFG+S + + + T Y+APE
Sbjct: 142 -IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 921 IVSTCGDVYSFGILM 935
C DV+S G+++
Sbjct: 199 YDEKC-DVWSAGVIL 212
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 25/197 (12%)
Query: 1342 LLGTGIFSSVYKAT-FADGTNAAIKIF--SLQEDRALKSFDAECEVMRRIRHRNLAKIVS 1398
+LG G F V K A+K+ + +++ + E E+++++ H N+ K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 1399 SCSNPGFKALILQYMPQGSL------EKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
+ ++ + G L K H+ I+Q V + Y+H+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ-------VFSGITYMHKH- 140
Query: 1453 STSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGS 1509
+I+H DLKP N+LL + D + DFG++ MK + T Y+APE
Sbjct: 141 --NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD--RIGTAYYIAPEV-L 195
Query: 1510 EGIVSTSGDVYSFGILM 1526
G DV+S G+++
Sbjct: 196 RGTYDEKCDVWSAGVIL 212
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 21/195 (10%)
Query: 751 LIGAGSFGSVYKATLPYGMN-VAIKVFNLQLDGAIKSFDA-----ECEVLRRVRHRNLVK 804
++G GSFG V K A+KV N + K+ D E E+L+++ H N++K
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVIN---KASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 805 IISSCSNHGFKALILEYMPQGSL-EKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPT 863
+ + ++ E G L ++ + +++ + R I+ V S + Y+H +
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITYMHKHN-- 141
Query: 864 PVIHCDLKPSNVLL---DDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEG 920
++H DLKP N+LL + D + DFG+S + + + T Y+APE
Sbjct: 142 -IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 921 IVSTCGDVYSFGILM 935
C DV+S G+++
Sbjct: 199 YDEKC-DVWSAGVIL 212
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 25/197 (12%)
Query: 1342 LLGTGIFSSVYKAT-FADGTNAAIKIF--SLQEDRALKSFDAECEVMRRIRHRNLAKIVS 1398
+LG G F V K A+K+ + +++ + E E+++++ H N+ K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 1399 SCSNPGFKALILQYMPQGSL------EKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
+ ++ + G L K H+ I+Q V + Y+H+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ-------VFSGITYMHKH- 140
Query: 1453 STSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGS 1509
+I+H DLKP N+LL + D + DFG++ MK + T Y+APE
Sbjct: 141 --NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD--RIGTAYYIAPEV-L 195
Query: 1510 EGIVSTSGDVYSFGILM 1526
G DV+S G+++
Sbjct: 196 RGTYDEKCDVWSAGVIL 212
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 40/211 (18%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDA--ECEVLRRVRHRNLVKII 806
+G+G++GSV Y A L VA+K + I + E +L+ ++H N++ ++
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 807 SSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLD--------------IMIDVAS 852
+ P S+E +S Y + D + V
Sbjct: 94 DV------------FTPATSIED--FSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQ 139
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYM 912
L L + H +IH DLKPSNV +++D+ + DFG+++ D E T +AT Y
Sbjct: 140 LLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWYR 195
Query: 913 APEYGSEGI-VSTCGDVYSFGILMIETFTRK 942
APE + + D++S G +M E K
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSNV +++D + DFG+A+ D + T +AT Y A
Sbjct: 144 LKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE----EMTGYVATRWYRA 196
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETL 1530
PE + + + D++S G +M E L
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 17/194 (8%)
Query: 1343 LGTGIFSSVYK-ATFADGTNAAIKIFSLQEDRALK------SFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K + G A K + ++ + + E +++ I+H N+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ N LIL+ + G L +L L E+ + + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 1456 IIHCDLKPSNVLLDDDMVA----HLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG 1511
I H DLKP N++L D V + DFG+A +D + K T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNYE 192
Query: 1512 IVSTSGDVYSFGIL 1525
+ D++S G++
Sbjct: 193 PLGLEADMWSIGVI 206
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYK-ATLPYGMNVAIKVFNLQLDGAIK------SFDAECE 792
+ + D + +G+G F V K G+ A K + + + + E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+L+ ++H N++ + N LILE + G L +L + K +L ++ + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILN 125
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA----HLSDFGISKLLDGEDSVTQTMTLAT 908
+ YLH + H DLKP N++L D V + DFG++ +D + T
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGT 180
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGIL 934
++APE + + D++S G++
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 40/211 (18%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDA--ECEVLRRVRHRNLVKII 806
+G+G++GSV Y A L VA+K + I + E +L+ ++H N++ ++
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 807 SSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLD--------------IMIDVAS 852
+ P S+E +S Y + D + V
Sbjct: 94 DV------------FTPATSIED--FSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQ 139
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYM 912
L L + H +IH DLKPSNV +++D+ + DFG+++ D E T +AT Y
Sbjct: 140 LLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWYR 195
Query: 913 APEYGSEGI-VSTCGDVYSFGILMIETFTRK 942
APE + + D++S G +M E K
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSNV +++D + DFG+A+ D + T +AT Y A
Sbjct: 144 LKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE----EMTGYVATRWYRA 196
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETL 1530
PE + + + D++S G +M E L
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 1440 DVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTL-A 1498
+++ AL YLH+ II+ DLK NVLLD + L D+G+ K +G+ T T
Sbjct: 161 EISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCG 215
Query: 1499 TIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
T Y+APE S D ++ G+LM E + R P D
Sbjct: 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 82/204 (40%), Gaps = 16/204 (7%)
Query: 751 LIGAGSFGSV-----YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRV-RHRNLVK 804
+IG GS+ V K Y M V K + D I E V + H LV
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKEL-VNDDEDIDWVQTEKHVFEQASNHPFLVG 117
Query: 805 IISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTP 864
+ S ++EY+ G L + + R +++ AL YLH
Sbjct: 118 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLHE---RG 173
Query: 865 VIHCDLKPSNVLLDDDTVAHLSDFGISK--LLDGEDSVTQTMTLATFGYMAPEYGSEGIV 922
+I+ DLK NVLLD + L+D+G+ K L G+ T + T Y+APE
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSTFCGTPNYIAPEILRGEDY 230
Query: 923 STCGDVYSFGILMIETFTRKMPTD 946
D ++ G+LM E + P D
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 6e-06, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 85/208 (40%), Gaps = 22/208 (10%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G +T L PEY + I
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG----TPEYLAPAI 209
Query: 1513 VSTSG-----DVYSFGILMMETLTRRKP 1535
+ + G D ++ G+L+ E P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Score = 50.8 bits (120), Expect = 7e-06, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 30/222 (13%)
Query: 728 LATWRRISYQELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGA 783
L W S Q D F +G GSFG V +K + G + A+K+ + Q
Sbjct: 27 LKKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVK 81
Query: 784 IKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
+K + E +L+ V LVK+ S ++ +++EY+ G + +SH +
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGR 137
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
A + + H +I+ DLKP N+L+D ++DFG +K + G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 901 TQTMTLATFGYMAPEYGSEGIVSTCG-----DVYSFGILMIE 937
+T L PEY + I+ + G D ++ G+L+ E
Sbjct: 194 -RTWXLCG----TPEYLAPAIILSKGYNKAVDWWALGVLIYE 230
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 17/194 (8%)
Query: 1343 LGTGIFSSVYK-ATFADGTNAAIKIFSLQEDRALK------SFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K + G A K + ++ + + E +++ I+H N+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ N LIL+ + G L +L L E+ + + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 1456 IIHCDLKPSNVLLDDDMVA----HLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG 1511
I H DLKP N++L D V + DFG+A +D + K T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNYE 192
Query: 1512 IVSTSGDVYSFGIL 1525
+ D++S G++
Sbjct: 193 PLGLEADMWSIGVI 206
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYK-ATLPYGMNVAIKVFNLQLDGAIK------SFDAECE 792
+ + D + +G+G F V K G+ A K + + + + E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+L+ ++H N++ + N LILE + G L +L + K +L ++ + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILN 125
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA----HLSDFGISKLLDGEDSVTQTMTLAT 908
+ YLH + H DLKP N++L D V + DFG++ +D + T
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGT 180
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGIL 934
++APE + + D++S G++
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 17/194 (8%)
Query: 1343 LGTGIFSSVYK-ATFADGTNAAIKIFSLQEDRALK------SFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K + G A K + ++ + + E +++ I+H N+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ N LIL+ + G L +L L E+ + + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 1456 IIHCDLKPSNVLLDDDMVA----HLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG 1511
I H DLKP N++L D V + DFG+A +D + K T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNYE 192
Query: 1512 IVSTSGDVYSFGIL 1525
+ D++S G++
Sbjct: 193 PLGLEADMWSIGVI 206
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYK-ATLPYGMNVAIKVFNLQLDGAIK------SFDAECE 792
+ + D + +G+G F V K G+ A K + + + + E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+L+ ++H N++ + N LILE + G L +L + K +L ++ + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILN 125
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA----HLSDFGISKLLDGEDSVTQTMTLAT 908
+ YLH + H DLKP N++L D V + DFG++ +D + T
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGT 180
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGIL 934
++APE + + D++S G++
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 17/194 (8%)
Query: 1343 LGTGIFSSVYK-ATFADGTNAAIKIFSLQEDRALK------SFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K + G A K + ++ + + E +++ I+H N+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ N LIL+ + G L +L L E+ + + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 1456 IIHCDLKPSNVLLDDDMVA----HLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG 1511
I H DLKP N++L D V + DFG+A +D + K T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNYE 192
Query: 1512 IVSTSGDVYSFGIL 1525
+ D++S G++
Sbjct: 193 PLGLEADMWSIGVI 206
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYK-ATLPYGMNVAIKVFNLQLDGAIK------SFDAECE 792
+ + D + +G+G F V K G+ A K + + + + E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+L+ ++H N++ + N LILE + G L +L + K +L ++ + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILN 125
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA----HLSDFGISKLLDGEDSVTQTMTLAT 908
+ YLH + H DLKP N++L D V + DFG++ +D + T
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGT 180
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGIL 934
++APE + + D++S G++
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
Length = 285
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 17/194 (8%)
Query: 1343 LGTGIFSSVYK-ATFADGTNAAIKIFSLQEDRALK------SFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K + G A K + ++ + + E +++ I+H N+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ N LIL+ + G L +L L E+ + + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 1456 IIHCDLKPSNVLLDDDMVA----HLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG 1511
I H DLKP N++L D V + DFG+A +D + K T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNYE 192
Query: 1512 IVSTSGDVYSFGIL 1525
+ D++S G++
Sbjct: 193 PLGLEADMWSIGVI 206
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYK-ATLPYGMNVAIKVFNLQLDGAIK------SFDAECE 792
+ + D + +G+G F V K G+ A K + + + + E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+L+ ++H N++ + N LILE + G L +L + K +L ++ + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILN 125
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA----HLSDFGISKLLDGEDSVTQTMTLAT 908
+ YLH + H DLKP N++L D V + DFG++ +D + T
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGT 180
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGIL 934
++APE + + D++S G++
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 20/192 (10%)
Query: 735 SYQELQRLTDGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIKSFDAECEV 793
++++ +LT S L+G G++ V A +L G A+K+ Q + E E
Sbjct: 9 KFEDMYKLT-----SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVET 63
Query: 794 LRRVR-HRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
L + + ++N++++I + L+ E + GS+ + K+ N ++ ++ DVA+
Sbjct: 64 LYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH-FNEREASRVVRDVAA 122
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDD---TVAHLSDFGISKLLDGEDSVTQTMT---- 905
AL++LH + H DLKP N+L + + + DF + + +S T T
Sbjct: 123 ALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELT 179
Query: 906 --LATFGYMAPE 915
+ YMAPE
Sbjct: 180 TPCGSAEYMAPE 191
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 20/212 (9%)
Query: 1340 SNLLGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIR-HRNLAKIV 1397
S LLG G ++ V A + +G A+KI Q + E E + + + ++N+ +++
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 1398 SSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSII 1457
+ L+ + + GS+ + + N + ++ DVA AL++LH + I
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKHF-NEREASRVVRDVAAALDFLH---TKGIA 133
Query: 1458 HCDLKPSNVLLDD-DMVA--HLGDFGIAKLLD------GVDSMKQTMTLATIGYMAPEY- 1507
H DLKP N+L + + V+ + DF + + + + + T + YMAPE
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVV 193
Query: 1508 ----GSEGIVSTSGDVYSFGILMMETLTRRKP 1535
D++S G+++ L+ P
Sbjct: 194 EVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 50.8 bits (120), Expect = 7e-06, Method: Composition-based stats.
Identities = 50/203 (24%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+++D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIIISKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
Score = 50.4 bits (119), Expect = 7e-06, Method: Composition-based stats.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 728 LATWRRISYQELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGA 783
L W S Q D F +G GSFG V +K + G + A+K+ + Q
Sbjct: 27 LKKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVK 81
Query: 784 IKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
+K + E +L+ V LVK+ S ++ +++EY+ G + +SH +
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGR 137
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
A + + H +I+ DLKP N+++D ++DFG +K + G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG---- 193
Query: 901 TQTMTL-ATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+T L T Y+APE + D ++ G+L+ E
Sbjct: 194 -RTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYE 230
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 32/205 (15%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAI--KSFDAECEVLRRVRHRNLVKIISS 808
+G+G++GSV A G VA+K + I K E +L+ ++H N++ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQ-----QRL---DIMIDVASALEY 856
+ P SLE+ +L +H ++ Q+L + + L
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L + H +IH DLKPSN+ +++D + DF +++ D E T +AT Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE----MTGYVATRWYRAPEI 193
Query: 917 GSEGI-VSTCGDVYSFGILMIETFT 940
+ + D++S G +M E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 38/210 (18%)
Query: 1343 LGTGIFSSVYKA-TFADGTNAAIKIFS--LQEDRALKSFDAECEVMRRIRHRNLAKIVSS 1399
+G+G + SV A G A+K S Q K E +++ ++H N+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 84
Query: 1400 CSNPGFKALILQYMPQGSLEK----WLYSH------NYLLNIEQRLD-----IMIDVACA 1444
L+ + P SLE+ +L +H N ++ ++ D ++ +
Sbjct: 85 -------GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSN+ +++D + DF +A+ D D M T +AT Y A
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTD--DEM--TGYVATRWYRA 190
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETLTRR 1533
PE + + + D++S G +M E LT R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In
Complex With Amppnp And Mg2+
Length = 295
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 17/194 (8%)
Query: 1343 LGTGIFSSVYK-ATFADGTNAAIKIFSLQEDRALK------SFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K + G A K + ++ + + E +++ I+H N+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ N LIL+ + G L +L L E+ + + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 1456 IIHCDLKPSNVLLDDDMVA----HLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG 1511
I H DLKP N++L D V + DFG+A +D + K T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNYE 192
Query: 1512 IVSTSGDVYSFGIL 1525
+ D++S G++
Sbjct: 193 PLGLEADMWSIGVI 206
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYK-ATLPYGMNVAIKVFNLQLDGAIK------SFDAECE 792
+ + D + +G+G F V K G+ A K + + + + E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+L+ ++H N++ + N LILE + G L +L + K +L ++ + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILN 125
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA----HLSDFGISKLLDGEDSVTQTMTLAT 908
+ YLH + H DLKP N++L D V + DFG++ +D + T
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGT 180
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGIL 934
++APE + + D++S G++
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound
Inhibitor Fragment
Length = 293
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 17/194 (8%)
Query: 1343 LGTGIFSSVYK-ATFADGTNAAIKIFSLQEDRALK------SFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K + G A K + ++ + + E +++ I+H N+
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ N LIL+ + G L +L L E+ + + + + YLH S
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 133
Query: 1456 IIHCDLKPSNVLLDDDMVA----HLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG 1511
I H DLKP N++L D V + DFG+A +D + K T ++APE +
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNYE 191
Query: 1512 IVSTSGDVYSFGIL 1525
+ D++S G++
Sbjct: 192 PLGLEADMWSIGVI 205
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYK-ATLPYGMNVAIKVFNLQLDGAIK------SFDAECE 792
+ + D + +G+G F V K G+ A K + + + + E
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+L+ ++H N++ + N LILE + G L +L + K +L ++ + + + +
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILN 124
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA----HLSDFGISKLLDGEDSVTQTMTLAT 908
+ YLH + H DLKP N++L D V + DFG++ +D + T
Sbjct: 125 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGT 179
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGIL 934
++APE + + D++S G++
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVI 205
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 38/216 (17%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMR 1386
YQ+L+ +G GI + + G N A+K S + F + R
Sbjct: 26 YQQLKPIGSG-------AQGIVCAAFDTVL--GINVAVKKLS-------RPFQNQTHAKR 69
Query: 1387 RIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD-- 1436
R L K V+ + +L+ + PQ +LE++ L N I LD
Sbjct: 70 AYRELVLLKCVN---HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHE 126
Query: 1437 ----IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492
++ + C +++LH S IIH DLKPSN+++ D + DFG+A+ +
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--ACTNFM 181
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMME 1528
T + T Y APE + + D++S G +M E
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGE 217
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 32/221 (14%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
IG+G+ G V A G+NVA+K + + F + R R L+K C
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLS-------RPFQNQTHAKRAYRELVLLK----CV 80
Query: 811 NH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL-------- 857
NH +L+ + PQ +LE+ +L N+ Q + + +D + YL
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELD-HERMSYLLYQMLCGI 139
Query: 858 HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYG 917
H H +IH DLKPSN+++ D + DFG+++ + T + T Y APE
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--ACTNFMMTPYVVTRYYRAPEVI 197
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
+ D++S G +M E + +F G + +W
Sbjct: 198 LGMGYAANVDIWSVGCIMGELVKGCV----IFQGTDHIDQW 234
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein
Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein
Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 50.4 bits (119), Expect = 9e-06, Method: Composition-based stats.
Identities = 50/203 (24%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ + P
Sbjct: 215 YNKAVDWWALGVLIYQMAAGYPP 237
Score = 50.4 bits (119), Expect = 9e-06, Method: Composition-based stats.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 728 LATWRRISYQELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGA 783
L W S Q D F +G GSFG V +K + G + A+K+ + Q
Sbjct: 27 LKKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVK 81
Query: 784 IKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
+K + E +L+ V LVK+ S ++ +++EY+ G + +SH +
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGR 137
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
A + + H +I+ DLKP N+L+D ++DFG +K + G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 901 TQTMTL-ATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+T L T Y+APE + D ++ G+L+ +
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQ 230
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 40/206 (19%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDA--ECEVLRRVRHRNLVKII 806
+G+G++GSV Y A L VA+K + I + E +L+ ++H N++ ++
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 807 SSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLD--------------IMIDVAS 852
+ P S+E +S Y + D + V
Sbjct: 86 DV------------FTPATSIED--FSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQ 131
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYM 912
L L + H +IH DLKPSNV +++D + DFG+++ D E T +AT Y
Sbjct: 132 LLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE----MTGYVATRWYR 187
Query: 913 APEYGSEGI-VSTCGDVYSFGILMIE 937
APE + + D++S G +M E
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAE 213
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMA 1504
L+Y+H S IIH DLKPSNV +++D + DFG+A+ D + T +AT Y A
Sbjct: 136 LKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADE----EMTGYVATRWYRA 188
Query: 1505 PEYGSEGI-VSTSGDVYSFGILMMETL 1530
PE + + + D++S G +M E L
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELL 215
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 26/224 (11%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSVYKATLP-----YGMNVAIKVFNLQLDGAIKSFDAEC 791
+E+Q + F +IG G+FG V + Y M + K + + F E
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNK-WEMLKRAETACFREER 141
Query: 792 EVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVA 851
+VL + + + + + L+++Y G L L + L + ++
Sbjct: 142 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMV 201
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
A++ +H H +H D+KP NVLLD + L+DFG ++ + +V ++ + T Y
Sbjct: 202 LAIDSIHQLH---YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDY 258
Query: 912 MAPE-----------YGSEGIVSTCGDVYSFGILMIETFTRKMP 944
++PE YG E C D +S G+ M E + P
Sbjct: 259 ISPEILQAMEDGMGKYGPE-----C-DWWSLGVCMYEMLYGETP 296
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 112/293 (38%), Gaps = 45/293 (15%)
Query: 1320 AALRRISY---------------QELRLATNGFSESNLLGTGIFSSVYKATFADGTN-AA 1363
+ALRR Y +E++L F ++G G F V + A
Sbjct: 60 SALRRDKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYA 119
Query: 1364 IKIFSLQE--DRALKS-FDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEK 1420
+KI + E RA + F E +V+ + + + + + L++ Y G L
Sbjct: 120 MKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLT 179
Query: 1421 WLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFG 1480
L L + + ++ A++ +HQ +H D+KP NVLLD + L DFG
Sbjct: 180 LLSKFEDKLPEDMARFYIGEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFG 236
Query: 1481 IAKLLDGVDSMKQTMTLATIGYMAPEY-----GSEGIVSTSGDVYSFGILMMETLTRRKP 1535
++ +++ ++ + T Y++PE G D +S G+ M E L P
Sbjct: 237 SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
Query: 1536 TDDMFTGEVCLK-------HWVEESLPDAVTDVIDANLLSGEEEADIAAKKKC 1581
F E ++ H P VTDV EE D+ + C
Sbjct: 297 ----FYAESLVETYGKIMNHEERFQFPSHVTDV-------SEEAKDLIQRLIC 338
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 34/222 (15%)
Query: 752 IGAGSFGSV---YKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISS 808
IG+G+ G V Y A L NVAIK + + F + R R L+K+++
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKVVNH 82
Query: 809 CSNHGFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL------- 857
+ G L+ + PQ SLE+ ++ N+ Q + + +D + YL
Sbjct: 83 KNIIG---LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD-HERMSYLLYQMLVG 138
Query: 858 -HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
H H +IH DLKPSN+++ D + DFG+++ S T + T Y APE
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEV 196
Query: 917 GSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E + +F G + +W
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGV----LFPGTDHIDQW 234
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 91/218 (41%), Gaps = 38/218 (17%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMR 1386
YQ L+ +G GI + Y A N AIK S + F + R
Sbjct: 26 YQNLKPIGSG-------AQGIVCAAYDAILE--RNVAIKKLS-------RPFQNQTHAKR 69
Query: 1387 RIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD-- 1436
R L K+V+ + G L+ + PQ SLE++ L N I+ LD
Sbjct: 70 AYRELVLMKVVNHKNIIG---LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHE 126
Query: 1437 ----IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492
++ + +++LH S IIH DLKPSN+++ D + DFG+A+ S
Sbjct: 127 RMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFM 181
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETL 1530
T + T Y APE + D++S G +M E +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 26/224 (11%)
Query: 737 QELQRLTDGFSESNLIGAGSFGSVYKATLP-----YGMNVAIKVFNLQLDGAIKSFDAEC 791
+E+Q + F +IG G+FG V + Y M + K + + F E
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNK-WEMLKRAETACFREER 125
Query: 792 EVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVA 851
+VL + + + + + L+++Y G L L + L + ++
Sbjct: 126 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMV 185
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGY 911
A++ +H H +H D+KP NVLLD + L+DFG ++ + +V ++ + T Y
Sbjct: 186 LAIDSIHQLH---YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDY 242
Query: 912 MAPE-----------YGSEGIVSTCGDVYSFGILMIETFTRKMP 944
++PE YG E C D +S G+ M E + P
Sbjct: 243 ISPEILQAMEDGMGKYGPE-----C-DWWSLGVCMYEMLYGETP 280
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 112/293 (38%), Gaps = 45/293 (15%)
Query: 1320 AALRRISY---------------QELRLATNGFSESNLLGTGIFSSVYKATFADGTN-AA 1363
+ALRR Y +E++L F ++G G F V + A
Sbjct: 44 SALRRDKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYA 103
Query: 1364 IKIFSLQE--DRALKS-FDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEK 1420
+KI + E RA + F E +V+ + + + + + L++ Y G L
Sbjct: 104 MKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLT 163
Query: 1421 WLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFG 1480
L L + + ++ A++ +HQ +H D+KP NVLLD + L DFG
Sbjct: 164 LLSKFEDKLPEDMARFYIGEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFG 220
Query: 1481 IAKLLDGVDSMKQTMTLATIGYMAPEY-----GSEGIVSTSGDVYSFGILMMETLTRRKP 1535
++ +++ ++ + T Y++PE G D +S G+ M E L P
Sbjct: 221 SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
Query: 1536 TDDMFTGEVCLK-------HWVEESLPDAVTDVIDANLLSGEEEADIAAKKKC 1581
F E ++ H P VTDV EE D+ + C
Sbjct: 281 ----FYAESLVETYGKIMNHEERFQFPSHVTDV-------SEEAKDLIQRLIC 322
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 14/132 (10%)
Query: 811 NHGFKAL--ILEYMPQGSLEKWLYSH-KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
+HG + L I+E M G L + ++ +IM D+ +A+++LH + + H
Sbjct: 76 HHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAH 132
Query: 868 CDLKPSNVLL---DDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPE-YGSEGIVS 923
D+KP N+L + D V L+DFG +K + + QT + Y+APE G E
Sbjct: 133 RDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPY-YVAPEVLGPEKYDK 189
Query: 924 TCGDVYSFGILM 935
+C D++S G++M
Sbjct: 190 SC-DMWSLGVIM 200
Score = 47.4 bits (111), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSMK 1492
+IM D+ A+++LH S +I H D+KP N+L + D V L DFG AK + +
Sbjct: 113 EIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNAL 167
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILM 1526
QT T Y+APE S D++S G++M
Sbjct: 168 QT-PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 200
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In
With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In
With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 13/198 (6%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQEDRALKSFDAECEVMRRIR-HRNLAKIVSSC 1400
LG G FS K A A+KI S R + E ++ H N+ K+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIIS---KRMEANTQKEITALKLCEGHPNIVKLHEVF 75
Query: 1401 SNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCD 1460
+ L+++ + G L + + + E IM + A+ ++H ++H D
Sbjct: 76 HDQLHTFLVMELLNGGELFERIKKKKHFSETEASY-IMRKLVSAVSHMH---DVGVVHRD 131
Query: 1461 LKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSG 1517
LKP N+L +D++ + DFG A+ L D+ T+ Y APE ++ S
Sbjct: 132 LKPENLLFTDENDNLEIKIIDFGFAR-LKPPDNQPLKTPCFTLHYAAPELLNQNGYDESC 190
Query: 1518 DVYSFGILMMETLTRRKP 1535
D++S G+++ L+ + P
Sbjct: 191 DLWSLGVILYTMLSGQVP 208
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 13/198 (6%)
Query: 752 IGAGSFGSVYKATLPYG-MNVAIKVFNLQLDGAIKSFDAECEVLRRVR-HRNLVKIISSC 809
+G GSF K A+K+ + +++ + E L+ H N+VK+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK---EITALKLCEGHPNIVKLHEVF 75
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCD 869
+ L++E + G L + + K+ + IM + SA+ H H V+H D
Sbjct: 76 HDQLHTFLVMELLNGGELFERIKKKKHFSETEASY-IMRKLVSAVS---HMHDVGVVHRD 131
Query: 870 LKPSNVLLDDDT---VAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCG 926
LKP N+L D+ + DFG ++L ++ +T T Y APE ++
Sbjct: 132 LKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGYDESC 190
Query: 927 DVYSFGILMIETFTRKMP 944
D++S G+++ + ++P
Sbjct: 191 DLWSLGVILYTMLSGQVP 208
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 1428 LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLD 1486
L +E + VA +E+L S IH DL N+LL + V + DFG+A+ +
Sbjct: 194 FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 250
Query: 1487 GVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
D +++ + +MAPE + + + DV+SFG+L+ E +
Sbjct: 251 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 834 HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK- 892
+K L ++ + VA +E+L IH DL N+LL + V + DFG+++
Sbjct: 191 YKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARD 247
Query: 893 LLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+ D V + +MAPE + + + DV+SFG+L+ E F+
Sbjct: 248 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 1428 LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLD 1486
L +E + VA +E+L S IH DL N+LL + V + DFG+A+ +
Sbjct: 196 FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 252
Query: 1487 GVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
D +++ + +MAPE + + + DV+SFG+L+ E +
Sbjct: 253 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 834 HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK- 892
+K L ++ + VA +E+L IH DL N+LL + V + DFG+++
Sbjct: 193 YKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARD 249
Query: 893 LLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+ D V + +MAPE + + + DV+SFG+L+ E F+
Sbjct: 250 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 1428 LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLD 1486
L +E + VA +E+L S IH DL N+LL + V + DFG+A+ +
Sbjct: 187 FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 243
Query: 1487 GVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
D +++ + +MAPE + + + DV+SFG+L+ E +
Sbjct: 244 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 834 HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK- 892
+K L ++ + VA +E+L IH DL N+LL + V + DFG+++
Sbjct: 184 YKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARD 240
Query: 893 LLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+ D V + +MAPE + + + DV+SFG+L+ E F+
Sbjct: 241 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel
Pyrrolopyrimidine Inhibitor
Length = 359
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 1428 LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK-LLD 1486
L +E + VA +E+L S IH DL N+LL + V + DFG+A+ +
Sbjct: 189 FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 245
Query: 1487 GVDSMKQTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLT 1531
D +++ + +MAPE + + + DV+SFG+L+ E +
Sbjct: 246 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 834 HKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK- 892
+K L ++ + VA +E+L IH DL N+LL + V + DFG+++
Sbjct: 186 YKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARD 242
Query: 893 LLDGEDSVTQTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFT 940
+ D V + +MAPE + + + DV+SFG+L+ E F+
Sbjct: 243 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 741 RLTDGFSESNLIGAGSFGSVYKATLPYG-MNVAIKVFNLQLDGAI--KSFDAECEVLRRV 797
++ D + +LIG GS+G VY A NVAIK N + I K E +L R+
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 798 RHRNLVKI---ISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASAL 854
+ ++++ I F L + S K L+ L Q I+ ++
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGE 144
Query: 855 EYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
+++H + +IH DLKP+N LL+ D + DFG+++ ++ + +
Sbjct: 145 KFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDI 187
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 35/142 (24%)
Query: 1437 IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGV-------- 1488
I+ ++ +++H+ + IIH DLKP+N LL+ D + DFG+A+ ++
Sbjct: 136 ILYNLLLGEKFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVND 192
Query: 1489 --------------DSMKQTMT--LATIGYMAPEYG-SEGIVSTSGDVYSFGILMMETLT 1531
++K+ +T + T Y APE + + S D++S G + E L
Sbjct: 193 LEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
Query: 1532 RRK-----PTDD--MFTGEVCL 1546
K PT+ +F G C
Sbjct: 253 MMKSHINNPTNRFPLFPGSSCF 274
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 32/221 (14%)
Query: 752 IGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIKSFDAECEVLRRVRHRNLVKIISSCS 810
IG+G+ G V A G+NVA+K + + F + R R L+K C
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLS-------RPFQNQTHAKRAYRELVLLK----CV 78
Query: 811 NH-GFKALILEYMPQGSLEK----WLYSHKYTLNIQQRLDIMIDVASALEYL-------- 857
NH +L+ + PQ +LE+ +L N+ Q + + +D + YL
Sbjct: 79 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELD-HERMSYLLYQMLCGI 137
Query: 858 HHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYG 917
H H +IH DLKPSN+++ D + DFG+++ + T + T Y APE
Sbjct: 138 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--ASTNFMMTPYVVTRYYRAPEVI 195
Query: 918 SEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKW 958
D++S G +M E + +F G + +W
Sbjct: 196 LGMGYKENVDIWSVGCIMGELVKGSV----IFQGTDHIDQW 232
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 38/216 (17%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMR 1386
YQ+L+ +G GI + + G N A+K S + F + R
Sbjct: 24 YQQLKPIGSG-------AQGIVCAAFDTVL--GINVAVKKLS-------RPFQNQTHAKR 67
Query: 1387 RIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKW--------LYSHNYLLNIEQRLD-- 1436
R L K V+ + +L+ + PQ +LE++ L N I LD
Sbjct: 68 AYRELVLLKCVN---HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHE 124
Query: 1437 ----IMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMK 1492
++ + C +++LH S IIH DLKPSN+++ D + DFG+A+ +
Sbjct: 125 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--ASTNFM 179
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMME 1528
T + T Y APE + D++S G +M E
Sbjct: 180 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 215
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 14/132 (10%)
Query: 811 NHGFKAL--ILEYMPQGSLEKWLYSH-KYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
+HG + L I+E M G L + ++ +IM D+ +A+++LH + + H
Sbjct: 95 HHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAH 151
Query: 868 CDLKPSNVLL---DDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY-GSEGIVS 923
D+KP N+L + D V L+DFG +K + + QT + Y+APE G E
Sbjct: 152 RDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPY-YVAPEVLGPEKYDK 208
Query: 924 TCGDVYSFGILM 935
+C D++S G++M
Sbjct: 209 SC-DMWSLGVIM 219
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSMK 1492
+IM D+ A+++LH S +I H D+KP N+L + D V L DFG AK + +
Sbjct: 132 EIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNAL 186
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILM 1526
QT T Y+APE S D++S G++M
Sbjct: 187 QT-PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 219
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 752 IGAGSFGSVYKATL-PYGMNVAIKVF--NLQLDGAIKSFDAECEVLRRVRHRNLVKII-- 806
+G+G++G+V A G VAIK Q + K E +L+ +RH N++ ++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 807 ----SSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHP 862
+ + L++ +M L K + K + R+ + V L+ L + H
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGT-DLGKLMKHEKLG---EDRIQFL--VYQMLKGLRYIHA 146
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEYGSEGIV 922
+IH DLKP N+ +++D + DFG+++ D E + T Y APE +
Sbjct: 147 AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE----MXGXVVTRWYRAPEVILNWMR 202
Query: 923 ST-CGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVE 960
T D++S G +M E T K +F G L + E
Sbjct: 203 YTQTVDIWSVGCIMAEMITGKT----LFKGSDHLDQLKE 237
Score = 43.9 bits (102), Expect = 6e-04, Method: Composition-based stats.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 22/200 (11%)
Query: 1343 LGTGIFSSVYKATFADG-TNAAIKIFSL----QEDRALKSFDAECEVMRRIRHRNLAKIV 1397
+G+G + +V A DG T A + I L Q + K E +++ +RH N+ ++
Sbjct: 33 VGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 1398 SSCSNP----GFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMI-DVACALEYLHQGY 1452
+ F L G+ L H L E R+ ++ + L Y+H
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLG--EDRIQFLVYQMLKGLRYIH--- 145
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
+ IIH DLKP N+ +++D + DFG+A+ D + + T Y APE +
Sbjct: 146 AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS----EMXGXVVTRWYRAPEVILNWM 201
Query: 1513 VSTSG-DVYSFGILMMETLT 1531
T D++S G +M E +T
Sbjct: 202 RYTQTVDIWSVGCIMAEMIT 221
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 16/102 (15%)
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDMVAHLG-----DFGIAKLLDGVDSMKQTMTLATIG 1501
YLHQ +I+H DLKP N+LL + LG DFG+++ + +++ M T
Sbjct: 146 YLHQN---NIVHLDLKPQNILLSS--IYPLGDIKIVDFGMSRKIGHACELREIM--GTPE 198
Query: 1502 YMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGE 1543
Y+APE + ++T+ D+++ GI+ LT P F GE
Sbjct: 199 YLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP----FVGE 236
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 845 DIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTV---AHLSDFGISKLLDGEDSVT 901
D++ + LE +++ H ++H DLKP N+LL + DFG+S+ + +
Sbjct: 132 DVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR 191
Query: 902 QTMTLATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWV 959
+ M T Y+APE + ++T D+++ GI+ T P F GE + + ++
Sbjct: 192 EIM--GTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP----FVGEDNQETYL 243
>pdb|4FCG|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of The Type
Iii Effector Xcv3220 (Xopl)
Length = 328
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 178 LPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLR 237
LP+S+ + LK L + + L+ P I +L +L EL L G +PP + L+
Sbjct: 198 LPASIANLQNLKSLKIRNSPLSALGPA-IHHLPKLEELDLRGCTALRNYPPIFGGRAPLK 256
Query: 238 VIVLANNSLFGSLPVDLCRRLPSLQELNLRDCMTTGRIPKDI----GNCTLL 285
++L + S +LP+D+ RL L++L+LR C+ R+P I NC +L
Sbjct: 257 RLILKDCSNLLTLPLDI-HRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIIL 307
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 13/148 (8%)
Query: 154 FDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGN----- 208
D LE+ ++ N + LP+S+ ++L+ LS+ +P+ + +
Sbjct: 119 LPDTXQQFAGLETLTLARNPLRA-LPASIASLNRLRELSIRACPELTELPEPLASTDASG 177
Query: 209 ----LTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSLQEL 264
L L L L ++ P +I N+ +L+ + + N+ L P LP L+EL
Sbjct: 178 EHQGLVNLQSLRLEWTGIRS-LPASIANLQNLKSLKIRNSPLSALGPA--IHHLPKLEEL 234
Query: 265 NLRDCMTTGRIPKDIGNCTLLNYLGLRD 292
+LR C P G L L L+D
Sbjct: 235 DLRGCTALRNYPPIFGGRAPLKRLILKD 262
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 1440 DVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTL-A 1498
+++ AL YLH+ II+ DLK NVLLD + L D+G+ K +G+ T
Sbjct: 114 EISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCG 168
Query: 1499 TIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
T Y+APE S D ++ G+LM E + R P D
Sbjct: 169 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 84/203 (41%), Gaps = 14/203 (6%)
Query: 751 LIGAGSFGSVYKATLPYGMNV-AIKVFNLQL---DGAIKSFDAECEVLRRV-RHRNLVKI 805
+IG GS+ V L + A+KV +L D I E V + H LV +
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 806 ISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPV 865
S ++EY+ G L + + R +++ AL YLH +
Sbjct: 72 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLHE---RGI 127
Query: 866 IHCDLKPSNVLLDDDTVAHLSDFGISK--LLDGEDSVTQTMTLATFGYMAPEYGSEGIVS 923
I+ DLK NVLLD + L+D+G+ K L G+ T + T Y+APE
Sbjct: 128 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIAPEILRGEDYG 184
Query: 924 TCGDVYSFGILMIETFTRKMPTD 946
D ++ G+LM E + P D
Sbjct: 185 FSVDWWALGVLMFEMMAGRSPFD 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++G V A VA+K+ +++ ++ E + + + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHP 862
+ L LEY G L + DI + A + H + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------ 914
+ H D+KP N+LLD+ +SDFG++ + + + + M T Y+AP
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX-GTLPYVAPELLKRR 181
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
E+ +E + DV+S GI++ ++P D+ W E+ L
Sbjct: 182 EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYL 227
Score = 41.6 bits (96), Expect = 0.004, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLAKIVS 1398
LG G + V A A A+KI ++ RA+ ++ E + + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG------- 1451
+ L L+Y G L IE DI + A + HQ
Sbjct: 72 HRREGNIQYLFLEYCSGGEL---------FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMAP---- 1505
+ I H D+KP N+LLD+ + DFG+A + + + + M T+ Y+AP
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX-GTLPYVAPELLK 179
Query: 1506 --EYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
E+ +E + DV+S GI++ L P D
Sbjct: 180 RREFHAEPV-----DVWSCGIVLTAMLAGELPWD 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++G V A VA+K+ +++ ++ E + + + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHP 862
+ L LEY G L + DI + A + H + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------ 914
+ H D+KP N+LLD+ +SDFG++ + + + + M T Y+AP
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX-GTLPYVAPELLKRR 181
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
E+ +E + DV+S GI++ ++P D+ W E+ L
Sbjct: 182 EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLAKIVS 1398
LG G + V A A A+KI ++ RA+ ++ E + + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG------- 1451
+ L L+Y G L IE DI + A + HQ
Sbjct: 72 HRREGNIQYLFLEYCSGGEL---------FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMAP---- 1505
+ I H D+KP N+LLD+ + DFG+A + + + + M T+ Y+AP
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX-GTLPYVAPELLK 179
Query: 1506 --EYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
E+ +E + DV+S GI++ L P D
Sbjct: 180 RREFHAEPV-----DVWSCGIVLTAMLAGELPWD 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++G V A VA+K+ +++ ++ E + + + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHP 862
+ L LEY G L + DI + A + H + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------ 914
+ H D+KP N+LLD+ +SDFG++ + + + + M T Y+AP
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX-GTLPYVAPELLKRR 182
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
E+ +E + DV+S GI++ ++P D+ W E+ L
Sbjct: 183 EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLAKIVS 1398
LG G + V A A A+KI ++ RA+ ++ E + + + H N+ K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG------- 1451
+ L L+Y G L IE DI + A + HQ
Sbjct: 73 HRREGNIQYLFLEYCSGGEL---------FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL 121
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMAP---- 1505
+ I H D+KP N+LLD+ + DFG+A + + + + M T+ Y+AP
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX-GTLPYVAPELLK 180
Query: 1506 --EYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
E+ +E + DV+S GI++ L P D
Sbjct: 181 RREFHAEPV-----DVWSCGIVLTAMLAGELPWD 209
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 1440 DVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTL-A 1498
+++ AL YLH+ II+ DLK NVLLD + L D+G+ K +G+ T
Sbjct: 129 EISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCG 183
Query: 1499 TIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
T Y+APE S D ++ G+LM E + R P D
Sbjct: 184 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 84/203 (41%), Gaps = 14/203 (6%)
Query: 751 LIGAGSFGSVYKATLPYGMNV-AIKVFNLQL---DGAIKSFDAECEVLRRV-RHRNLVKI 805
+IG GS+ V L + A+KV +L D I E V + H LV +
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 806 ISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPV 865
S ++EY+ G L + + R +++ AL YLH +
Sbjct: 87 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLHE---RGI 142
Query: 866 IHCDLKPSNVLLDDDTVAHLSDFGISK--LLDGEDSVTQTMTLATFGYMAPEYGSEGIVS 923
I+ DLK NVLLD + L+D+G+ K L G+ T + T Y+APE
Sbjct: 143 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIAPEILRGEDYG 199
Query: 924 TCGDVYSFGILMIETFTRKMPTD 946
D ++ G+LM E + P D
Sbjct: 200 FSVDWWALGVLMFEMMAGRSPFD 222
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta
Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C Beta
Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 48.9 bits (115), Expect = 3e-05, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 38/230 (16%)
Query: 1331 RLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRH 1390
R+ F+ +LG G F V + GT+ + L++D ++ D EC ++ +
Sbjct: 16 RMKLTDFNFLMVLGKGSFGKVMLSE-RKGTDELYAVKILKKDVVIQDDDVECTMVEK--- 71
Query: 1391 RNLAKIVSSCSNPGFKA-------------LILQYMPQGSLEKWLYSHNYLLNIEQRLDI 1437
++++ P F +++Y+ G L +Y + ++ +
Sbjct: 72 ----RVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAV 124
Query: 1438 MI--DVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAK--LLDGVDSMKQ 1493
++A L +L S II+ DLK NV+LD + + DFG+ K + DGV +
Sbjct: 125 FYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT--- 178
Query: 1494 TMTLATIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGE 1543
T Y+APE + S D ++FG+L+ E L + P F GE
Sbjct: 179 KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP----FEGE 224
Score = 47.0 bits (110), Expect = 1e-04, Method: Composition-based stats.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 26/224 (11%)
Query: 741 RLTDGFSESNLIGAGSFGSVYKATLPYGMNVAIKVFNLQLDGAIKSFDAECEVL-RRV-- 797
+LTD F+ ++G GSFG V + G + V L+ D I+ D EC ++ +RV
Sbjct: 18 KLTD-FNFLMVLGKGSFGKVMLSERK-GTDELYAVKILKKDVVIQDDDVECTMVEKRVLA 75
Query: 798 ---RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMI--DVAS 852
+ L ++ S ++EY+ G L +Y + ++ + ++A
Sbjct: 76 LPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAVFYAAEIAI 132
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK--LLDGEDSVTQTMTLATFG 910
L +L +I+ DLK NV+LD + ++DFG+ K + DG VT T
Sbjct: 133 GLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---VTTKXFCGTPD 186
Query: 911 YMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMP-----TDEMF 949
Y+APE + D ++FG+L+ E + P DE+F
Sbjct: 187 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF 230
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 3e-05, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++G V A VA+K+ +++ ++ E + + + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHP 862
+ L LEY G L + DI + A + H + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------ 914
+ H D+KP N+LLD+ +SDFG++ + + + + M T Y+AP
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKRR 181
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
E+ +E + DV+S GI++ ++P D+ W E+ L
Sbjct: 182 EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLAKIVS 1398
LG G + V A A A+KI ++ RA+ ++ E + + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG------- 1451
+ L L+Y G L IE DI + A + HQ
Sbjct: 72 HRREGNIQYLFLEYCSGGEL---------FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMAP---- 1505
+ I H D+KP N+LLD+ + DFG+A + + + + M T+ Y+AP
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLK 179
Query: 1506 --EYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
E+ +E + DV+S GI++ L P D
Sbjct: 180 RREFHAEPV-----DVWSCGIVLTAMLAGELPWD 208
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 1440 DVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTL-A 1498
+++ AL YLH+ II+ DLK NVLLD + L D+G+ K +G+ T
Sbjct: 118 EISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCG 172
Query: 1499 TIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
T Y+APE S D ++ G+LM E + R P D
Sbjct: 173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 84/203 (41%), Gaps = 14/203 (6%)
Query: 751 LIGAGSFGSVYKATLPYGMNV-AIKVFNLQL---DGAIKSFDAECEVLRRV-RHRNLVKI 805
+IG GS+ V L + A+KV +L D I E V + H LV +
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 806 ISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPV 865
S ++EY+ G L + + R +++ AL YLH +
Sbjct: 76 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLHE---RGI 131
Query: 866 IHCDLKPSNVLLDDDTVAHLSDFGISK--LLDGEDSVTQTMTLATFGYMAPEYGSEGIVS 923
I+ DLK NVLLD + L+D+G+ K L G+ T + T Y+APE
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIAPEILRGEDYG 188
Query: 924 TCGDVYSFGILMIETFTRKMPTD 946
D ++ G+LM E + P D
Sbjct: 189 FSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++G V A VA+K+ +++ ++ E + + + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHP 862
+ L LEY G L + DI + A + H + H
Sbjct: 74 REGNIQYLFLEYCSGGELFD-----------RIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------ 914
+ H D+KP N+LLD+ +SDFG++ + + + + M T Y+AP
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKRR 181
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
E+ +E + DV+S GI++ ++P D+ W E+ L
Sbjct: 182 EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 85/209 (40%), Gaps = 28/209 (13%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLAKIVS 1398
LG G + V A A A+KI ++ RA+ ++ E + + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG------- 1451
+ L L+Y G L IE DI + A + HQ
Sbjct: 72 HRREGNIQYLFLEYCSGGEL---------FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMAPE-YG 1508
+ I H D+KP N+LLD+ + DFG+A + + + + M T+ Y+APE
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLK 179
Query: 1509 SEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
+ DV+S GI++ L P D
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++G V A VA+K+ +++ ++ E + + + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHP 862
+ L LEY G L + DI + A + H + H
Sbjct: 75 REGNIQYLFLEYCSGGELFD-----------RIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------ 914
+ H D+KP N+LLD+ +SDFG++ + + + + M T Y+AP
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKRR 182
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
E+ +E + DV+S GI++ ++P D+ W E+ L
Sbjct: 183 EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 85/209 (40%), Gaps = 28/209 (13%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLAKIVS 1398
LG G + V A A A+KI ++ RA+ ++ E + + + H N+ K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG------- 1451
+ L L+Y G L IE DI + A + HQ
Sbjct: 73 HRREGNIQYLFLEYCSGGEL---------FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL 121
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMAPE-YG 1508
+ I H D+KP N+LLD+ + DFG+A + + + + M T+ Y+APE
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLK 180
Query: 1509 SEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
+ DV+S GI++ L P D
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 48.1 bits (113), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/109 (36%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMV-AHLGDFGIAKLLD----GVDSMKQTMTLA 1498
LEYLH S I+H D+K NVLL D A L DFG A L G D +
Sbjct: 178 GLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPG 234
Query: 1499 TIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK 1547
T +MAPE DV+S +M+ L P F G +CLK
Sbjct: 235 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLK 283
Score = 47.4 bits (111), Expect = 8e-05, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 89/215 (41%), Gaps = 23/215 (10%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFDAE----CEVLRRVRHRNLVKII 806
+G GSFG V++ G A+K L++ F AE C L R +V +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEV------FRAEELMACAGLTSPR---IVPLY 132
Query: 807 SSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVI 866
+ + + +E + GSL + L + L + L + LEYLH ++
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQ-LVKEQGCLPEDRALYYLGQALEGLEYLHSRR---IL 188
Query: 867 HCDLKPSNVLLDDD-TVAHLSDFGISKLLD----GEDSVTQTMTLATFGYMAPEYGSEGI 921
H D+K NVLL D + A L DFG + L G+D +T T +MAPE
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS 248
Query: 922 VSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLK 956
DV+S +M+ P + F G LK
Sbjct: 249 CDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLK 283
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 12/203 (5%)
Query: 1337 FSESNLLGTGIFSSVYKATFAD-GTNAAIKIFSLQEDRALKSFD---AECEVMRRIRHRN 1392
F LGTG F V + G + A+KI Q+ LK + E +++ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 1393 LAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGY 1452
L K+ S + ++++Y+ G + L R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 1453 STSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGI 1512
S +I+ DLKP N+L+D + DFG AK + G + T +APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEALAPEIILSKG 214
Query: 1513 VSTSGDVYSFGILMMETLTRRKP 1535
+ + D ++ G+L+ E P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
Score = 48.1 bits (113), Expect = 4e-05, Method: Composition-based stats.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 22/218 (10%)
Query: 728 LATWRRISYQELQRLTDGFSESNLIGAGSFGSV----YKATLPYGMNVAIKVFNLQLDGA 783
L W S Q D F +G GSFG V +K + G + A+K+ + Q
Sbjct: 27 LKKWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVK 81
Query: 784 IKSFD---AECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNI 840
+K + E +L+ V LVK+ S ++ +++EY+ G + +SH +
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGR 137
Query: 841 QQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSV 900
A + + H +I+ DLKP N+L+D ++DFG +K + G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193
Query: 901 TQTMTL-ATFGYMAPEYGSEGIVSTCGDVYSFGILMIE 937
+T L T +APE + D ++ G+L+ E
Sbjct: 194 -RTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 31/219 (14%)
Query: 743 TDGFS---------ESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIKS-FDAEC 791
TD FS + +++G G+ V L A+K+ Q G I+S E
Sbjct: 3 TDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ-PGHIRSRVFREV 61
Query: 792 EVLRRVR-HRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDV 850
E+L + + HRN++++I L+ E M GS+ ++ ++ ++ + ++ DV
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDV 120
Query: 851 ASALEYLHHGHPTPVIHCDLKPSNVLLDDD---TVAHLSDFGISK--LLDGEDSVTQTMT 905
ASAL++LH+ + H DLKP N+L + + + DFG+ L+G+ S T
Sbjct: 121 ASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPE 177
Query: 906 LAT----FGYMAPE----YGSEG-IVSTCGDVYSFGILM 935
L T YMAPE + E I D++S G+++
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 20/213 (9%)
Query: 1339 ESNLLGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIR-HRNLAKI 1396
+ ++LG G + V A+KI Q E E++ + + HRN+ ++
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 1397 VSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSI 1456
+ L+ + M GS+ ++ + +E + ++ DVA AL++LH + I
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDVASALDFLH---NKGI 132
Query: 1457 IHCDLKPSNVLLDD-DMVA--HLGDFGIAK--LLDGVDSMKQTMTLAT----IGYMAPE- 1506
H DLKP N+L + + V+ + DFG+ L+G S T L T YMAPE
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 1507 ---YGSEG-IVSTSGDVYSFGILMMETLTRRKP 1535
+ E I D++S G+++ L+ P
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Query: 741 RLTDGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNLQLDGAIKSFDAECEVLRRV-- 797
R T F E IG+G FGSV+K G AIK L G++ +A EV
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 798 -RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRL---DIMIDVASA 853
+H ++V+ S+ + + EY GSL + + ++ + D+++ V
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTV 882
L Y+ H ++H D+KPSN+ + ++
Sbjct: 128 LRYI---HSMSLVHMDIKPSNIFISRTSI 153
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 18/146 (12%)
Query: 1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIK------IFSLQEDRALKSFDAECEVMR 1386
T F E +G+G F SV+K DG AIK S+ E AL+ A + +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 1387 RIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNY----LLNIEQRLDIMIDVA 1442
H ++ + S+ + + +Y GSL + S NY + D+++ V
Sbjct: 70 ---HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVG 125
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLL 1468
L Y+H S S++H D+KPSN+ +
Sbjct: 126 RGLRYIH---SMSLVHMDIKPSNIFI 148
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.8 bits (112), Expect = 5e-05, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 26/185 (14%)
Query: 746 FSESNLIGAGSFGSVYKAT-LPYGMNVAIKVFNLQL--------DGAIKSFDAECEVLRR 796
+S + +G+G+FG V+ A V +K + D + E +L R
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 797 VRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLD------IMIDV 850
V H N++K++ N GF L++E G L+ + + ++ RLD I +
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHP-----RLDEPLASYIFRQL 139
Query: 851 ASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFG 910
SA+ YL +IH D+K N+++ +D L DFG + L+ + T T
Sbjct: 140 VSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE-RGKLFYTFC-GTIE 194
Query: 911 YMAPE 915
Y APE
Sbjct: 195 YCAPE 199
Score = 47.8 bits (112), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/186 (26%), Positives = 79/186 (42%), Gaps = 28/186 (15%)
Query: 1337 FSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQE---------DRALKSFDAECEVMRR 1387
+S + LG+G F V+ A + + F +E D L E ++ R
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 1388 IRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLD------IMIDV 1441
+ H N+ K++ N GF L+++ G L+ + + ++ RLD I +
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEKHGSG-LDLFAF-----IDRHPRLDEPLASYIFRQL 139
Query: 1442 ACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTL-ATI 1500
A+ YL IIH D+K N+++ +D L DFG A L + K T TI
Sbjct: 140 VSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL---ERGKLFYTFCGTI 193
Query: 1501 GYMAPE 1506
Y APE
Sbjct: 194 EYCAPE 199
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Query: 741 RLTDGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNLQLDGAIKSFDAECEVLRRV-- 797
R T F E IG+G FGSV+K G AIK L G++ +A EV
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 798 -RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRL---DIMIDVASA 853
+H ++V+ S+ + + EY GSL + + ++ + D+++ V
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTV 882
L Y+ H ++H D+KPSN+ + ++
Sbjct: 126 LRYI---HSMSLVHMDIKPSNIFISRTSI 151
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 18/146 (12%)
Query: 1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIK------IFSLQEDRALKSFDAECEVMR 1386
T F E +G+G F SV+K DG AIK S+ E AL+ A + +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 1387 RIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNY----LLNIEQRLDIMIDVA 1442
H ++ + S+ + + +Y GSL + S NY + D+++ V
Sbjct: 68 ---HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVG 123
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLL 1468
L Y+H S S++H D+KPSN+ +
Sbjct: 124 RGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 47.8 bits (112), Expect = 5e-05, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 16/168 (9%)
Query: 787 FDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKW-----LYSHKYT--LN 839
F E +++ +++ + +N+ +I EYM S+ K+ + YT +
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 840 IQQRLDIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISK-LLDGED 898
IQ I+ V ++ Y+H+ + H D+KPSN+L+D + LSDFG S+ ++D +
Sbjct: 150 IQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKI 207
Query: 899 SVTQTMTLATFGYMAPEYGSEGIVSTCG--DVYSFGILMIETFTRKMP 944
++ T+ +M PE+ S D++S GI + F +P
Sbjct: 208 KGSR----GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
Score = 43.5 bits (101), Expect = 0.001, Method: Composition-based stats.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 1353 KATFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQY 1412
K F N I I S +D F E +++ I++ +N +I +Y
Sbjct: 70 KRDFTKSNNDKISIKSKYDD-----FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEY 124
Query: 1413 MPQGSLEKW-----LYSHNY--LLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSN 1465
M S+ K+ + NY + I+ I+ V + Y+H +I H D+KPSN
Sbjct: 125 MENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSN 182
Query: 1466 VLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEGIVSTSG---DVYSF 1522
+L+D + L DFG ++ + VD K + T +M PE+ S S +G D++S
Sbjct: 183 ILMDKNGRVKLSDFGESEYM--VDK-KIKGSRGTYEFMPPEFFSNE-SSYNGAKVDIWSL 238
Query: 1523 GILM 1526
GI +
Sbjct: 239 GICL 242
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 6e-05, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++G V A VA+K+ +++ ++ E + + + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHP 862
+ L LEY G L + DI + A + H + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------ 914
+ H D+KP N+LLD+ +SDFG++ + + + + M T Y+AP
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX-GTLPYVAPELLKRR 181
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
E+ +E + DV+S GI++ ++P D+ W E+ L
Sbjct: 182 EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Score = 41.6 bits (96), Expect = 0.004, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLAKIVS 1398
LG G + V A A A+KI ++ RA+ ++ E + + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG------- 1451
+ L L+Y G L IE DI + A + HQ
Sbjct: 72 HRREGNIQYLFLEYCSGGEL---------FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMAP---- 1505
+ I H D+KP N+LLD+ + DFG+A + + + + M T+ Y+AP
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX-GTLPYVAPELLK 179
Query: 1506 --EYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
E+ +E + DV+S GI++ L P D
Sbjct: 180 RREFHAEPV-----DVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.8 bits (112), Expect = 6e-05, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++G V A VA+K+ +++ ++ E + + + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHP 862
+ L LEY G L + DI + A + H + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------ 914
+ H D+KP N+LLD+ +SDFG++ + + + + M T Y+AP
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX-GTLPYVAPELLKRR 181
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
E+ +E + DV+S GI++ ++P D+ W E+ L
Sbjct: 182 EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Score = 41.6 bits (96), Expect = 0.004, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLAKIVS 1398
LG G + V A A A+KI ++ RA+ ++ E + + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG------- 1451
+ L L+Y G L IE DI + A + HQ
Sbjct: 72 HRREGNIQYLFLEYCSGGEL---------FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMAP---- 1505
+ I H D+KP N+LLD+ + DFG+A + + + + M T+ Y+AP
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX-GTLPYVAPELLK 179
Query: 1506 --EYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
E+ +E + DV+S GI++ L P D
Sbjct: 180 RREFHAEPV-----DVWSCGIVLTAMLAGELPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.4 bits (111), Expect = 6e-05, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++G V A VA+K+ +++ ++ E + + + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHP 862
+ L LEY G L + DI + A + H + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------ 914
+ H D+KP N+LLD+ +SDFG++ + + + + M T Y+AP
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKRR 182
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
E+ +E + DV+S GI++ ++P D+ W E+ L
Sbjct: 183 EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLAKIVS 1398
LG G + V A A A+KI ++ RA+ ++ E + + + H N+ K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG------- 1451
+ L L+Y G L IE DI + A + HQ
Sbjct: 73 HRREGNIQYLFLEYCSGGEL---------FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL 121
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMAP---- 1505
+ I H D+KP N+LLD+ + DFG+A + + + + M T+ Y+AP
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLK 180
Query: 1506 --EYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
E+ +E + DV+S GI++ L P D
Sbjct: 181 RREFHAEPV-----DVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.4 bits (111), Expect = 6e-05, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++G V A VA+K+ +++ ++ E + + + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHP 862
+ L LEY G L + DI + A + H + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------ 914
+ H D+KP N+LLD+ +SDFG++ + + + + M T Y+AP
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKRR 182
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
E+ +E + DV+S GI++ ++P D+ W E+ L
Sbjct: 183 EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLAKIVS 1398
LG G + V A A A+KI ++ RA+ ++ E + + + H N+ K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG------- 1451
+ L L+Y G L IE DI + A + HQ
Sbjct: 73 HRREGNIQYLFLEYCSGGEL---------FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL 121
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMAP---- 1505
+ I H D+KP N+LLD+ + DFG+A + + + + M T+ Y+AP
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLK 180
Query: 1506 --EYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
E+ +E + DV+S GI++ L P D
Sbjct: 181 RREFHAEPV-----DVWSCGIVLTAMLAGELPWD 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.4 bits (111), Expect = 6e-05, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++G V A VA+K+ +++ ++ E + + + H N+VK
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHP 862
+ L LEY G L + DI + A + H + H
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLHG 121
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------ 914
+ H D+KP N+LLD+ +SDFG++ + + + + M T Y+AP
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKRR 180
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
E+ +E + DV+S GI++ ++P D+ W E+ L
Sbjct: 181 EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 226
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLAKIVS 1398
LG G + V A A A+KI ++ RA+ ++ E + + + H N+ K
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG------- 1451
+ L L+Y G L IE DI + A + HQ
Sbjct: 71 HRREGNIQYLFLEYCSGGEL---------FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL 119
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMAP---- 1505
+ I H D+KP N+LLD+ + DFG+A + + + + M T+ Y+AP
Sbjct: 120 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLK 178
Query: 1506 --EYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
E+ +E + DV+S GI++ L P D
Sbjct: 179 RREFHAEPV-----DVWSCGIVLTAMLAGELPWD 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 6e-05, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++G V A VA+K+ +++ ++ E + + + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHP 862
+ L LEY G L + DI + A + H + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------ 914
+ H D+KP N+LLD+ +SDFG++ + + + + M T Y+AP
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKRR 181
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
E+ +E + DV+S GI++ ++P D+ W E+ L
Sbjct: 182 EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLAKIVS 1398
LG G + V A A A+KI ++ RA+ ++ E + + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG------- 1451
+ L L+Y G L IE DI + A + HQ
Sbjct: 72 HRREGNIQYLFLEYCSGGEL---------FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMAP---- 1505
+ I H D+KP N+LLD+ + DFG+A + + + + M T+ Y+AP
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLK 179
Query: 1506 --EYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
E+ +E + DV+S GI++ L P D
Sbjct: 180 RREFHAEPV-----DVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.4 bits (111), Expect = 6e-05, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++G V A VA+K+ +++ ++ E + + + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHP 862
+ L LEY G L + DI + A + H + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------ 914
+ H D+KP N+LLD+ +SDFG++ + + + + M T Y+AP
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKRR 181
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
E+ +E + DV+S GI++ ++P D+ W E+ L
Sbjct: 182 EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLAKIVS 1398
LG G + V A A A+KI ++ RA+ ++ E + + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG------- 1451
+ L L+Y G L IE DI + A + HQ
Sbjct: 72 HRREGNIQYLFLEYCSGGEL---------FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMAP---- 1505
+ I H D+KP N+LLD+ + DFG+A + + + + M T+ Y+AP
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLK 179
Query: 1506 --EYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
E+ +E + DV+S GI++ L P D
Sbjct: 180 RREFHAEPV-----DVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 6e-05, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++G V A VA+K+ +++ ++ E + + + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHP 862
+ L LEY G L + DI + A + H + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------ 914
+ H D+KP N+LLD+ +SDFG++ + + + + M T Y+AP
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKRR 182
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
E+ +E + DV+S GI++ ++P D+ W E+ L
Sbjct: 183 EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLAKIVS 1398
LG G + V A A A+KI ++ RA+ ++ E + + + H N+ K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG------- 1451
+ L L+Y G L IE DI + A + HQ
Sbjct: 73 HRREGNIQYLFLEYCSGGEL---------FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL 121
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMAP---- 1505
+ I H D+KP N+LLD+ + DFG+A + + + + M T+ Y+AP
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLK 180
Query: 1506 --EYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
E+ +E + DV+S GI++ L P D
Sbjct: 181 RREFHAEPV-----DVWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.4 bits (111), Expect = 6e-05, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++G V A VA+K+ +++ ++ E + + + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHP 862
+ L LEY G L + DI + A + H + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------ 914
+ H D+KP N+LLD+ +SDFG++ + + + + M T Y+AP
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKRR 181
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
E+ +E + DV+S GI++ ++P D+ W E+ L
Sbjct: 182 EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLAKIVS 1398
LG G + V A A A+KI ++ RA+ ++ E + + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG------- 1451
+ L L+Y G L IE DI + A + HQ
Sbjct: 72 HRREGNIQYLFLEYCSGGEL---------FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMAP---- 1505
+ I H D+KP N+LLD+ + DFG+A + + + + M T+ Y+AP
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLK 179
Query: 1506 --EYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
E+ +E + DV+S GI++ L P D
Sbjct: 180 RREFHAEPV-----DVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.4 bits (111), Expect = 6e-05, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++G V A VA+K+ +++ ++ E + + + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHP 862
+ L LEY G L + DI + A + H + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------ 914
+ H D+KP N+LLD+ +SDFG++ + + + + M T Y+AP
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKRR 181
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
E+ +E + DV+S GI++ ++P D+ W E+ L
Sbjct: 182 EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLAKIVS 1398
LG G + V A A A+KI ++ RA+ ++ E + + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG------- 1451
+ L L+Y G L IE DI + A + HQ
Sbjct: 72 HRREGNIQYLFLEYCSGGEL---------FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMAP---- 1505
+ I H D+KP N+LLD+ + DFG+A + + + + M T+ Y+AP
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLK 179
Query: 1506 --EYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
E+ +E + DV+S GI++ L P D
Sbjct: 180 RREFHAEPV-----DVWSCGIVLTAMLAGELPWD 208
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Query: 741 RLTDGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNLQLDGAIKSFDAECEVLRRV-- 797
R T F E IG+G FGSV+K G AIK L G++ +A EV
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 798 -RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRL---DIMIDVASA 853
+H ++V+ S+ + + EY GSL + + ++ + D+++ V
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTV 882
L Y+ H ++H D+KPSN+ + ++
Sbjct: 126 LRYI---HSMSLVHMDIKPSNIFISRTSI 151
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 18/146 (12%)
Query: 1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIK------IFSLQEDRALKSFDAECEVMR 1386
T F E +G+G F SV+K DG AIK S+ E AL+ A + +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 1387 RIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNY----LLNIEQRLDIMIDVA 1442
H ++ + S+ + + +Y GSL + S NY + D+++ V
Sbjct: 68 ---HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVG 123
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLL 1468
L Y+H S S++H D+KPSN+ +
Sbjct: 124 RGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.4 bits (111), Expect = 6e-05, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++G V A VA+K+ +++ ++ E + + + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHP 862
+ L LEY G L + DI + A + H + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------ 914
+ H D+KP N+LLD+ +SDFG++ + + + + M T Y+AP
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKRR 181
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
E+ +E + DV+S GI++ ++P D+ W E+ L
Sbjct: 182 EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLAKIVS 1398
LG G + V A A A+KI ++ RA+ ++ E + + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG------- 1451
+ L L+Y G L IE DI + A + HQ
Sbjct: 72 HRREGNIQYLFLEYCSGGEL---------FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMAP---- 1505
+ I H D+KP N+LLD+ + DFG+A + + + + M T+ Y+AP
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLK 179
Query: 1506 --EYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
E+ +E + DV+S GI++ L P D
Sbjct: 180 RREFHAEPV-----DVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.4 bits (111), Expect = 6e-05, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++G V A VA+K+ +++ ++ E + + + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHP 862
+ L LEY G L + DI + A + H + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------ 914
+ H D+KP N+LLD+ +SDFG++ + + + + M T Y+AP
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKRR 182
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
E+ +E + DV+S GI++ ++P D+ W E+ L
Sbjct: 183 EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLAKIVS 1398
LG G + V A A A+KI ++ RA+ ++ E + + + H N+ K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG------- 1451
+ L L+Y G L IE DI + A + HQ
Sbjct: 73 HRREGNIQYLFLEYCSGGEL---------FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL 121
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMAP---- 1505
+ I H D+KP N+LLD+ + DFG+A + + + + M T+ Y+AP
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLK 180
Query: 1506 --EYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
E+ +E + DV+S GI++ L P D
Sbjct: 181 RREFHAEPV-----DVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.4 bits (111), Expect = 6e-05, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++G V A VA+K+ +++ ++ E + + + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHP 862
+ L LEY G L + DI + A + H + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------ 914
+ H D+KP N+LLD+ +SDFG++ + + + + M T Y+AP
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKRR 182
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
E+ +E + DV+S GI++ ++P D+ W E+ L
Sbjct: 183 EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 1343 LGTGIFSSVYKATFADGTNA-AIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLAKIVS 1398
LG G + V A A A+KI ++ RA+ ++ E + + + H N+ K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 1399 SCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQG------- 1451
+ L L+Y G L IE DI + A + HQ
Sbjct: 73 HRREGNIQYLFLEYCSGGEL---------FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL 121
Query: 1452 YSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMAP---- 1505
+ I H D+KP N+LLD+ + DFG+A + + + + M T+ Y+AP
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLK 180
Query: 1506 --EYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
E+ +E + DV+S GI++ L P D
Sbjct: 181 RREFHAEPV-----DVWSCGIVLTAMLAGELPWD 209
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFAD--------GTNAAIKIFSLQEDRALKSF 1378
+ ++R F+ES LG G F+ ++K + T +K+ +SF
Sbjct: 2 FHKIRNEDLIFNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESF 59
Query: 1379 DAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIM 1438
+M ++ H++L C L+ +++ GSL+ +L + +NI +L++
Sbjct: 60 FEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVA 119
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLD---GVDSMKQTM 1495
+A A+ +L + ++IH ++ N+LL + G+ KL D + + + +
Sbjct: 120 KQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176
Query: 1496 TLATIGYMAPE-YGSEGIVSTSGDVYSFGILMME 1528
I ++ PE + ++ + D +SFG + E
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWE 210
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 97/209 (46%), Gaps = 27/209 (12%)
Query: 746 FSESNLIGAGSFGSVYKATL----PYGM----NVAIKVFNLQLDGAIKSFDAECEVLRRV 797
F+ES +G G+F ++K YG V +KV + +SF ++ ++
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 798 RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYL 857
H++LV C L+ E++ GSL+ +L +K +NI +L++ +A+A+ +L
Sbjct: 70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFL 129
Query: 858 HHGHPTPVIHCDLKPSNVLL--DDDT------VAHLSDFGISKLLDGEDSVTQTMTLATF 909
+IH ++ N+LL ++D LSD GIS + +D + + +
Sbjct: 130 EE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP---- 182
Query: 910 GYMAPE-YGSEGIVSTCGDVYSFGILMIE 937
++ PE + ++ D +SFG + E
Sbjct: 183 -WVPPECIENPKNLNLATDKWSFGTTLWE 210
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Query: 741 RLTDGFSESNLIGAGSFGSVYKATLPY-GMNVAIKVFNLQLDGAIKSFDAECEVLRRV-- 797
R T F E IG+G FGSV+K G AIK L G++ +A EV
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 63
Query: 798 -RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRL---DIMIDVASA 853
+H ++V+ S+ + + EY GSL + + ++ + D+++ V
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 123
Query: 854 LEYLHHGHPTPVIHCDLKPSNVLLDDDTV 882
L Y+ H ++H D+KPSN+ + ++
Sbjct: 124 LRYI---HSMSLVHMDIKPSNIFISRTSI 149
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 18/146 (12%)
Query: 1334 TNGFSESNLLGTGIFSSVYKATFA-DGTNAAIK------IFSLQEDRALKSFDAECEVMR 1386
T F E +G+G F SV+K DG AIK S+ E AL+ A + +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 1387 RIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNY----LLNIEQRLDIMIDVA 1442
H ++ + S+ + + +Y GSL + S NY + D+++ V
Sbjct: 66 ---HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVG 121
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLL 1468
L Y+H S S++H D+KPSN+ +
Sbjct: 122 RGLRYIH---SMSLVHMDIKPSNIFI 144
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 17/194 (8%)
Query: 1343 LGTGIFSSVYK-ATFADGTNAAIKIFSLQEDRALK------SFDAECEVMRRIRHRNLAK 1395
LG+G F+ V K + G A K + ++ + + E +++ I+H N+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTS 1455
+ N LI + + G L +L L E+ + + + + YLH S
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 1456 IIHCDLKPSNVLLDDDMVA----HLGDFGIAKLLDGVDSMKQTMTLATIGYMAPEYGSEG 1511
I H DLKP N++L D V + DFG+A +D + K T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNYE 192
Query: 1512 IVSTSGDVYSFGIL 1525
+ D++S G++
Sbjct: 193 PLGLEADMWSIGVI 206
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 740 QRLTDGFSESNLIGAGSFGSVYK-ATLPYGMNVAIKVFNLQLDGAIK------SFDAECE 792
+ + D + +G+G F V K G+ A K + + + + E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 793 VLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVAS 852
+L+ ++H N++ + N LI E + G L +L + K +L ++ + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL-AEKESLTEEEATEFLKQILN 125
Query: 853 ALEYLHHGHPTPVIHCDLKPSNVLLDDDTVA----HLSDFGISKLLDGEDSVTQTMTLAT 908
+ YLH + H DLKP N++L D V + DFG++ +D + T
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGT 180
Query: 909 FGYMAPEYGSEGIVSTCGDVYSFGIL 934
++APE + + D++S G++
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFAD--------GTNAAIKIFSLQEDRALKSF 1378
+ ++R F+ES LG G F+ ++K + T +K+ +SF
Sbjct: 2 FHKIRNEDLIFNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESF 59
Query: 1379 DAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIM 1438
+M ++ H++L C L+ +++ GSL+ +L + +NI +L++
Sbjct: 60 FEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVA 119
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLD---GVDSMKQTM 1495
+A A+ +L + ++IH ++ N+LL + G+ KL D + + + +
Sbjct: 120 KQLAWAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176
Query: 1496 TLATIGYMAPE-YGSEGIVSTSGDVYSFGILMME 1528
I ++ PE + ++ + D +SFG + E
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWE 210
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 27/209 (12%)
Query: 746 FSESNLIGAGSFGSVYKATL----PYGM----NVAIKVFNLQLDGAIKSFDAECEVLRRV 797
F+ES +G G+F ++K YG V +KV + +SF ++ ++
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 798 RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYL 857
H++LV C L+ E++ GSL+ +L +K +NI +L++ +A A+ +L
Sbjct: 70 SHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFL 129
Query: 858 HHGHPTPVIHCDLKPSNVLL--DDDT------VAHLSDFGISKLLDGEDSVTQTMTLATF 909
+IH ++ N+LL ++D LSD GIS + +D + + +
Sbjct: 130 EE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP---- 182
Query: 910 GYMAPE-YGSEGIVSTCGDVYSFGILMIE 937
++ PE + ++ D +SFG + E
Sbjct: 183 -WVPPECIENPKNLNLATDKWSFGTTLWE 210
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMK 1492
+IM + A++YLH S +I H D+KP N+L + + L DFG AK +S+
Sbjct: 125 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 180
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILM 1526
T T Y+APE S D++S G++M
Sbjct: 181 -TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 213
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 845 DIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDGEDSVT 901
+IM + A++YLH + + H D+KP N+L + + L+DFG +K +S+
Sbjct: 125 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 180
Query: 902 QTMTLATFGYMAPEY-GSEGIVSTCGDVYSFGILM 935
T T Y+APE G E +C D++S G++M
Sbjct: 181 -TTPCYTPYYVAPEVLGPEKYDKSC-DMWSLGVIM 213
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMK 1492
+IM + A++YLH S +I H D+KP N+L + + L DFG AK +S+
Sbjct: 126 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 181
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILM 1526
T T Y+APE S D++S G++M
Sbjct: 182 -TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 214
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 845 DIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDGEDSVT 901
+IM + A++YLH + + H D+KP N+L + + L+DFG +K +S+
Sbjct: 126 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 181
Query: 902 QTMTLATFGYMAPEY-GSEGIVSTCGDVYSFGILM 935
T T Y+APE G E +C D++S G++M
Sbjct: 182 -TTPCYTPYYVAPEVLGPEKYDKSC-DMWSLGVIM 214
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMK 1492
+IM + A++YLH S +I H D+KP N+L + + L DFG AK +S+
Sbjct: 165 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 220
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILM 1526
T T Y+APE S D++S G++M
Sbjct: 221 -TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 253
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 845 DIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDGEDSVT 901
+IM + A++YLH + + H D+KP N+L + + L+DFG +K +S+
Sbjct: 165 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 220
Query: 902 QTMTLATFGYMAPEY-GSEGIVSTCGDVYSFGILM 935
T T Y+APE G E +C D++S G++M
Sbjct: 221 -TTPCYTPYYVAPEVLGPEKYDKSC-DMWSLGVIM 253
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMK 1492
+IM + A++YLH S +I H D+KP N+L + + L DFG AK +S+
Sbjct: 127 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 182
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILM 1526
T T Y+APE S D++S G++M
Sbjct: 183 -TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 215
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 845 DIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDGEDSVT 901
+IM + A++YLH + + H D+KP N+L + + L+DFG +K +S+
Sbjct: 127 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 182
Query: 902 QTMTLATFGYMAPEY-GSEGIVSTCGDVYSFGILM 935
T T Y+APE G E +C D++S G++M
Sbjct: 183 -TTPCYTPYYVAPEVLGPEKYDKSC-DMWSLGVIM 215
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMK 1492
+IM + A++YLH S +I H D+KP N+L + + L DFG AK +S+
Sbjct: 171 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 226
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILM 1526
T T Y+APE S D++S G++M
Sbjct: 227 -TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 259
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 845 DIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDGEDSVT 901
+IM + A++YLH + + H D+KP N+L + + L+DFG +K +S+
Sbjct: 171 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 226
Query: 902 QTMTLATFGYMAPEY-GSEGIVSTCGDVYSFGILM 935
T T Y+APE G E +C D++S G++M
Sbjct: 227 -TTPCYTPYYVAPEVLGPEKYDKSC-DMWSLGVIM 259
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMK 1492
+IM + A++YLH S +I H D+KP N+L + + L DFG AK +S+
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 176
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILM 1526
T T Y+APE S D++S G++M
Sbjct: 177 -TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 209
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 845 DIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDGEDSVT 901
+IM + A++YLH + + H D+KP N+L + + L+DFG +K +S+
Sbjct: 121 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 176
Query: 902 QTMTLATFGYMAPEY-GSEGIVSTCGDVYSFGILM 935
T T Y+APE G E +C D++S G++M
Sbjct: 177 -TTPCYTPYYVAPEVLGPEKYDKSC-DMWSLGVIM 209
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMK 1492
+IM + A++YLH S +I H D+KP N+L + + L DFG AK +S+
Sbjct: 120 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 175
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILM 1526
T T Y+APE S D++S G++M
Sbjct: 176 -TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 208
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 845 DIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDGEDSVT 901
+IM + A++YLH + + H D+KP N+L + + L+DFG +K +S+
Sbjct: 120 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 175
Query: 902 QTMTLATFGYMAPEY-GSEGIVSTCGDVYSFGILM 935
T T Y+APE G E +C D++S G++M
Sbjct: 176 -TTPCYTPYYVAPEVLGPEKYDKSC-DMWSLGVIM 208
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMK 1492
+IM + A++YLH S +I H D+KP N+L + + L DFG AK +S+
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 176
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILM 1526
T T Y+APE S D++S G++M
Sbjct: 177 -TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 209
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 845 DIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDGEDSVT 901
+IM + A++YLH + + H D+KP N+L + + L+DFG +K +S+
Sbjct: 121 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 176
Query: 902 QTMTLATFGYMAPEY-GSEGIVSTCGDVYSFGILM 935
T T Y+APE G E +C D++S G++M
Sbjct: 177 -TTPCYTPYYVAPEVLGPEKYDKSC-DMWSLGVIM 209
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMK 1492
+IM + A++YLH S +I H D+KP N+L + + L DFG AK +S+
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 174
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILM 1526
T T Y+APE S D++S G++M
Sbjct: 175 -TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 845 DIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDGEDSVT 901
+IM + A++YLH + + H D+KP N+L + + L+DFG +K +S+
Sbjct: 119 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 174
Query: 902 QTMTLATFGYMAPEY-GSEGIVSTCGDVYSFGILM 935
T T Y+APE G E +C D++S G++M
Sbjct: 175 -TTPCYTPYYVAPEVLGPEKYDKSC-DMWSLGVIM 207
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMK 1492
+IM + A++YLH S +I H D+KP N+L + + L DFG AK +S+
Sbjct: 135 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 190
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILM 1526
T T Y+APE S D++S G++M
Sbjct: 191 -TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 223
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 845 DIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDGEDSVT 901
+IM + A++YLH + + H D+KP N+L + + L+DFG +K +S+
Sbjct: 135 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 190
Query: 902 QTMTLATFGYMAPEY-GSEGIVSTCGDVYSFGILM 935
T T Y+APE G E +C D++S G++M
Sbjct: 191 -TTPCYTPYYVAPEVLGPEKYDKSC-DMWSLGVIM 223
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 845 DIMIDVASALEYLHHGHPTPVIHCDLKPSNVLLDD---DTVAHLSDFGISKLLDGEDSVT 901
+IM + A++YLH + + H D+KP N+L + + L+DFG +K +S+T
Sbjct: 119 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 175
Query: 902 QTMTLATFGYMAPEY-GSEGIVSTCGDVYSFGILM 935
+ T Y+APE G E +C D++S G++M
Sbjct: 176 E--PCYTPYYVAPEVLGPEKYDKSC-DMWSLGVIM 207
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 1436 DIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDD---DMVAHLGDFGIAKLLDGVDSMK 1492
+IM + A++YLH S +I H D+KP N+L + + L DFG AK +S+
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 174
Query: 1493 QTMTLATIGYMAPEYGSEGIVSTSGDVYSFGILM 1526
T T Y+APE S D++S G++M
Sbjct: 175 -TEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 202 IPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDLCRRLPSL 261
I NI L LYLNGN+L E P I N+S+LRV+ L++N L SLP +L L
Sbjct: 239 ISANIFKYDFLTRLYLNGNSL-TELPAEIKNLSNLRVLDLSHNRL-TSLPAELGSCF-QL 295
Query: 262 QELNLRDCMTTGRIPKDIGNCTLLNYLGLRDNQLTD-----FGANNLTGLI 307
+ D M T +P + GN L +LG+ N L ++TGLI
Sbjct: 296 KYFYFFDNMVTT-LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLI 345
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 28/122 (22%)
Query: 105 IPPHVANLSFLVSLNISGNRFHGTLPNELWLMPRLRIIDLSSNRISGNLFDDMCNSLTEL 164
I ++ FL L ++GN LP E+ + LR++DLS NR++
Sbjct: 239 ISANIFKYDFLTRLYLNGNSL-TELPAEIKNLSNLRVLDLSHNRLTS------------- 284
Query: 165 ESFDVSSNQITGQLPSSLGDCSKLKRLSVSFNELTGRIPQNIGNLTELMELYLNGNNLQG 224
LP+ LG C +LK F+ + +P GNL L L + GN L+
Sbjct: 285 -------------LPAELGSCFQLKYFYF-FDNMVTTLPWEFGNLCNLQFLGVEGNPLEK 330
Query: 225 EF 226
+F
Sbjct: 331 QF 332
Score = 38.1 bits (87), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 460 IPAEFGNLSNIIALSLYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQLESLN 519
+PAE NLSN+ L L N+L S +P +G L+ ++N+ ++P E L +L
Sbjct: 262 LPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYF-FDNMVTTLPWEFGNLCNLQ 319
Query: 520 TLLLQGNALQNQI 532
L ++GN L+ Q
Sbjct: 320 FLGVEGNPLEKQF 332
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.2 bits (108), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 33/211 (15%)
Query: 771 VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSCSNHGFKALILEYMPQGSLEK 829
VA+K+ +++ ++ E + + + H N+VK + L LEY G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 830 WLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHPTPVIHCDLKPSNVLLDDDTV 882
+ DI + A + H + H + H D+KP N+LLD+
Sbjct: 94 RIEP-----------DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 142
Query: 883 AHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------EYGSEGIVSTCGDVYSFGIL 934
+SDFG++ + + + + M T Y+AP E+ +E + DV+S GI+
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKRREFHAEPV-----DVWSCGIV 196
Query: 935 MIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
+ ++P D+ W E+ L
Sbjct: 197 LTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Score = 40.4 bits (93), Expect = 0.007, Method: Composition-based stats.
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 37/193 (19%)
Query: 1363 AIKIFSLQEDRAL---KSFDAECEVMRRIRHRNLAKIVSSCSNPGFKALILQYMPQGSLE 1419
A+KI ++ RA+ ++ E + + + H N+ K + L L+Y G L
Sbjct: 35 AVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL- 91
Query: 1420 KWLYSHNYLLNIEQRLDIMIDVACALEYLHQG-------YSTSIIHCDLKPSNVLLDDDM 1472
IE DI + A + HQ + I H D+KP N+LLD+
Sbjct: 92 --------FDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD 141
Query: 1473 VAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMAP------EYGSEGIVSTSGDVYSFGI 1524
+ DFG+A + + + + M T+ Y+AP E+ +E + DV+S GI
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKRREFHAEPV-----DVWSCGI 195
Query: 1525 LMMETLTRRKPTD 1537
++ L P D
Sbjct: 196 VLTAMLAGELPWD 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 46.2 bits (108), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 34/231 (14%)
Query: 752 IGAGSFGSVYKATLPYGMN-VAIKVFNLQLD-GAIKSFDAECEVLRRVRHRNLVKIISSC 809
+G G++G V A VA+K+ +++ ++ E + + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 810 SNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLH-------HGHP 862
+ L LEY G L + DI + A + H + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEP-----------DIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 863 TPVIHCDLKPSNVLLDDDTVAHLSDFGISKLL--DGEDSVTQTMTLATFGYMAP------ 914
+ H D+KP N+LLD+ +SDFG++ + + + + M T Y+AP
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKRR 182
Query: 915 EYGSEGIVSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLKKWVEESLRL 965
E+ +E + DV+S GI++ ++P D+ W E+ L
Sbjct: 183 EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Score = 40.0 bits (92), Expect = 0.012, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 17/99 (17%)
Query: 1447 YLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLL--DGVDSMKQTMTLATIGYMA 1504
YLH I H D+KP N+LLD+ + DFG+A + + + + M T+ Y+A
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVA 175
Query: 1505 P------EYGSEGIVSTSGDVYSFGILMMETLTRRKPTD 1537
P E+ +E + DV+S GI++ L P D
Sbjct: 176 PELLKRREFHAEPV-----DVWSCGIVLTAMLAGELPWD 209
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 1440 DVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLDGVDSMKQTMTLAT 1499
D AL +LH S ++H D+KP+N+ L LGDFG+ L++ + +
Sbjct: 165 DTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGD 219
Query: 1500 IGYMAPEYGSEGIVSTSGDVYSFGILMME 1528
YMAPE +G T+ DV+S G+ ++E
Sbjct: 220 PRYMAPEL-LQGSYGTAADVFSLGLTILE 247
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 857 LHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGEDSVTQTMTLATFGYMAPEY 916
L H H ++H D+KP+N+ L L DFG+ L++ + + YMAPE
Sbjct: 170 LAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMAPEL 227
Query: 917 GSEGIVSTCGDVYSFGILMIE 937
+G T DV+S G+ ++E
Sbjct: 228 -LQGSYGTAADVFSLGLTILE 247
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/109 (36%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 1444 ALEYLHQGYSTSIIHCDLKPSNVLLDDDMV-AHLGDFGIAKLLDGVDSMKQTMT----LA 1498
LEYLH S I+H D+K NVLL D A L DFG A L K +T
Sbjct: 197 GLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPG 253
Query: 1499 TIGYMAPEYGSEGIVSTSGDVYSFGILMMETLTRRKPTDDMFTGEVCLK 1547
T +MAPE DV+S +M+ L P F G +CLK
Sbjct: 254 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLK 302
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 59/215 (27%), Positives = 88/215 (40%), Gaps = 23/215 (10%)
Query: 752 IGAGSFGSVYKAT-LPYGMNVAIKVFNLQLDGAIKSFDAE----CEVLRRVRHRNLVKII 806
+G GSFG V++ G A+K L++ F AE C L R +V +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEV------FRAEELMACAGLTSPR---IVPLY 151
Query: 807 SSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVI 866
+ + + +E + GSL + L + L + L + LEYLH ++
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQ-LVKEQGCLPEDRALYYLGQALEGLEYLHSRR---IL 207
Query: 867 HCDLKPSNVLLDDD-TVAHLSDFGISKLLD----GEDSVTQTMTLATFGYMAPEYGSEGI 921
H D+K NVLL D + A L DFG + L G+ +T T +MAPE
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS 267
Query: 922 VSTCGDVYSFGILMIETFTRKMPTDEMFTGETSLK 956
DV+S +M+ P + F G LK
Sbjct: 268 CDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLK 302
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 87/219 (39%), Gaps = 28/219 (12%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKV-----FNLQLDGAIKSFDAECEVLRRV 797
D + +IG G F V + G A+K+ F + + E + +
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 798 RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA---- 853
+H ++V+++ + S+ G ++ E+M L I +R D + A
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADL---------CFEIVKRADAGFVYSEAVASH 136
Query: 854 -----LEYLHHGHPTPVIHCDLKPSNVLL---DDDTVAHLSDFGISKLLDGEDSVTQTMT 905
LE L + H +IH D+KP VLL ++ L FG++ L GE +
Sbjct: 137 YMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL-GESGLVAGGR 195
Query: 906 LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ T +MAPE DV+ G+++ + +P
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 234
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 28/208 (13%)
Query: 1342 LLGTGIFSSVYKATFAD-GTNAAIKI-----FSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++G G FS V + + G A+KI F+ + + E + ++H ++ +
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLD--IMIDVACALEYLHQ--- 1450
++ + S+ G ++ ++M L I +R D + A A Y+ Q
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADL---------CFEIVKRADAGFVYSEAVASHYMRQILE 143
Query: 1451 ----GYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
+ +IIH D+KP VLL ++ LG FG+A L G + + T +M
Sbjct: 144 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL-GESGLVAGGRVGTPHFM 202
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE DV+ G+++ L+
Sbjct: 203 APEVVKREPYGKPVDVWGCGVILFILLS 230
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 87/219 (39%), Gaps = 28/219 (12%)
Query: 744 DGFSESNLIGAGSFGSVYKA-TLPYGMNVAIKV-----FNLQLDGAIKSFDAECEVLRRV 797
D + +IG G F V + G A+K+ F + + E + +
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 798 RHRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVASA---- 853
+H ++V+++ + S+ G ++ E+M L I +R D + A
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADL---------CFEIVKRADAGFVYSEAVASH 134
Query: 854 -----LEYLHHGHPTPVIHCDLKPSNVLL---DDDTVAHLSDFGISKLLDGEDSVTQTMT 905
LE L + H +IH D+KP VLL ++ L FG++ L GE +
Sbjct: 135 YMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL-GESGLVAGGR 193
Query: 906 LATFGYMAPEYGSEGIVSTCGDVYSFGILMIETFTRKMP 944
+ T +MAPE DV+ G+++ + +P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 28/208 (13%)
Query: 1342 LLGTGIFSSVYKATFAD-GTNAAIKI-----FSLQEDRALKSFDAECEVMRRIRHRNLAK 1395
++G G FS V + + G A+KI F+ + + E + ++H ++ +
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 1396 IVSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLD--IMIDVACALEYLHQ--- 1450
++ + S+ G ++ ++M L I +R D + A A Y+ Q
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADL---------CFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 1451 ----GYSTSIIHCDLKPSNVLL---DDDMVAHLGDFGIAKLLDGVDSMKQTMTLATIGYM 1503
+ +IIH D+KP VLL ++ LG FG+A L G + + T +M
Sbjct: 142 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL-GESGLVAGGRVGTPHFM 200
Query: 1504 APEYGSEGIVSTSGDVYSFGILMMETLT 1531
APE DV+ G+++ L+
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLS 228
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 31/219 (14%)
Query: 743 TDGFS---------ESNLIGAGSFGSVYKA-TLPYGMNVAIKVFNLQLDGAIKS-FDAEC 791
TD FS + +++G G+ V L A+K+ Q G I+S E
Sbjct: 3 TDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ-PGHIRSRVFREV 61
Query: 792 EVLRRVR-HRNLVKIISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDV 850
E+L + + HRN++++I L+ E M GS+ ++ ++ ++ + ++ DV
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDV 120
Query: 851 ASALEYLHHGHPTPVIHCDLKPSNVLLDDD---TVAHLSDF--GISKLLDGEDSVTQTMT 905
ASAL++LH+ + H DLKP N+L + + + DF G L+G+ S T
Sbjct: 121 ASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 906 LAT----FGYMAPE----YGSEG-IVSTCGDVYSFGILM 935
L T YMAPE + E I D++S G+++
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 20/213 (9%)
Query: 1339 ESNLLGTGIFSSVYKA-TFADGTNAAIKIFSLQEDRALKSFDAECEVMRRIR-HRNLAKI 1396
+ ++LG G + V A+KI Q E E++ + + HRN+ ++
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 1397 VSSCSNPGFKALILQYMPQGSLEKWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSI 1456
+ L+ + M GS+ ++ + +E + ++ DVA AL++LH + I
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDVASALDFLH---NKGI 132
Query: 1457 IHCDLKPSNVLLDD-DMVAHLG----DFGIAKLLDGVDSMKQTMTLAT----IGYMAPE- 1506
H DLKP N+L + + V+ + D G L+G S T L T YMAPE
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 1507 ---YGSEG-IVSTSGDVYSFGILMMETLTRRKP 1535
+ E I D++S G+++ L+ P
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 15/166 (9%)
Query: 741 RLTDGFSESNLIGAGSFGSVYKATLPYGMN----VAIKVFNLQLDGAI--KSFDAECEVL 794
+ D + +LIG GS+G VY L Y N VAIK N + I K E +L
Sbjct: 23 HVPDNYIIKHLIGRGSYGYVY---LAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITIL 79
Query: 795 RRVRHRNLVKI---ISSCSNHGFKALILEYMPQGSLEKWLYSHKYTLNIQQRLDIMIDVA 851
R++ ++++ I F L + S K L+ L + I+ ++
Sbjct: 80 NRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLL 139
Query: 852 SALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLDGE 897
++H + +IH DLKP+N LL+ D + DFG+++ ++ E
Sbjct: 140 LGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 38/159 (23%)
Query: 1420 KWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDF 1479
K L+ L E I+ ++ ++H+ + IIH DLKP+N LL+ D + DF
Sbjct: 117 KKLFKTPIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDF 173
Query: 1480 GIAKLLDGV-------------------DSMKQTMT--LATIGYMAPEYG-SEGIVSTSG 1517
G+A+ ++ ++K+ +T + T Y APE + + S
Sbjct: 174 GLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSI 233
Query: 1518 DVYSFGILMMETL----------TRRKPTDDMFTGEVCL 1546
D++S G + E L T R P +F G C
Sbjct: 234 DIWSTGCIFAELLNMLQSHINDPTNRFP---LFPGSSCF 269
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 11/185 (5%)
Query: 1327 YQELRLATNGFSESNLLGTGIFSSVYKATFADGTNAAIKIFSLQE--DRALKSFDAECEV 1384
+Q + + +S +G+G S V++ AIK +L+E ++ L S+ E
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 1385 MRRIRHRNLAKIVSSCSNPGFKALILQYMPQGS--LEKWLYSHNYLLNIEQRLDIMIDVA 1442
+ +++ + KI+ I M G+ L WL + E++
Sbjct: 80 LNKLQQHS-DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYW----K 134
Query: 1443 CALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIA-KLLDGVDSMKQTMTLATIG 1501
LE +H + I+H DLKP+N L+ D M+ L DFGIA ++ S+ + + T+
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVN 193
Query: 1502 YMAPE 1506
YM PE
Sbjct: 194 YMPPE 198
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 11/169 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSC 809
IG+G V++ AIK NL+ + + S+ E L +++ + KII
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIRLY 94
Query: 810 SNHGFKALILEYMPQGS--LEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
I M G+ L WL K +++ +R ++ LE +H H ++H
Sbjct: 95 DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNM---LEAVHTIHQHGIVH 150
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGE-DSVTQTMTLATFGYMAPE 915
DLKP+N L+ D + L DFGI+ + + SV + + T YM PE
Sbjct: 151 SDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 198
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 790 ECEVLRRVRHRNLVKIISSCSNHGFKAL--ILEYMPQGSLEKWLYSHKYTLNIQQRLDIM 847
E ++LRR+RH+N+++++ N + + ++EY G E + + Q
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 848 IDVASALEYLHHGHPTPVIHCDLKPSNVLLDDDTVAHLSDFGISKLLD--GEDSVTQTMT 905
+ LEYLH ++H D+KP N+LL +S G+++ L D +T +
Sbjct: 116 CQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT-S 171
Query: 906 LATFGYMAPEYGSEGIVSTCG---DVYSFGILMIETFTRKMP 944
+ + PE + G+ + G D++S G+ + T P
Sbjct: 172 QGSPAFQPPEI-ANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 1381 ECEVMRRIRHRNLAKIVSSCSNPGFKAL--ILQYMPQGSLEKWLYSHNYLLNIEQRLDIM 1438
E +++RR+RH+N+ ++V N + + +++Y G E + Q
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 1439 IDVACALEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIAKLLD--GVDSMKQTMT 1496
+ LEYLH S I+H D+KP N+LL + G+A+ L D +T +
Sbjct: 116 CQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT-S 171
Query: 1497 LATIGYMAPEYGSEGIVSTSG---DVYSFGILMMETLT 1531
+ + PE + G+ + SG D++S G+ + T
Sbjct: 172 QGSPAFQPPEI-ANGLDTFSGFKVDIWSAGVTLYNITT 208
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 70/159 (44%), Gaps = 4/159 (2%)
Query: 135 LMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVS 194
LMP R+ L+ +R + +L L + D+S NQ+ LP L L VS
Sbjct: 51 LMPYTRLTQLNLDRCELTKLQ-VDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVS 108
Query: 195 FNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDL 254
FN LT + L EL ELYL GN L+ P + L + LANN L LP L
Sbjct: 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQL-TELPAGL 167
Query: 255 CRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDN 293
L +L L L++ + IPK LL + L N
Sbjct: 168 LNGLENLDTLLLQE-NSLYTIPKGFFGSHLLPFAFLHGN 205
Score = 30.4 bits (67), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 64/167 (38%), Gaps = 35/167 (20%)
Query: 459 GIPAEFGNLSNIIALS---LYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQL 515
+P + + I+ LS LY LA+ +P T NL +L+ + G++P
Sbjct: 24 ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPV----- 78
Query: 516 ESLNTLLLQGNALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLEYILVVDFSLNL 575
L TL L N LQ+ +P +L + V+D S N
Sbjct: 79 --LGTLDLSHNQLQS-------------------------LPLLGQTLPALTVLDVSFNR 111
Query: 576 LSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARN 622
L+ + L L LYL GN+L P + L L+LA N
Sbjct: 112 LTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 71/159 (44%), Gaps = 4/159 (2%)
Query: 135 LMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVS 194
LMP R+ L+ +R + +L L + D+S NQ+ LP L L VS
Sbjct: 51 LMPYTRLTQLNLDRAELTKLQ-VDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVS 108
Query: 195 FNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDL 254
FN LT + L EL ELYL GN L+ P + L + LANN+L LP L
Sbjct: 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL-TELPAGL 167
Query: 255 CRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDN 293
L +L L L++ + IPK LL + L N
Sbjct: 168 LNGLENLDTLLLQE-NSLYTIPKGFFGSHLLPFAFLHGN 205
Score = 30.4 bits (67), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 64/167 (38%), Gaps = 35/167 (20%)
Query: 459 GIPAEFGNLSNIIALS---LYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQL 515
+P + + I+ LS LY LA+ +P T NL +L+ + G++P
Sbjct: 24 ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPV----- 78
Query: 516 ESLNTLLLQGNALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLEYILVVDFSLNL 575
L TL L N LQ+ +P +L + V+D S N
Sbjct: 79 --LGTLDLSHNQLQS-------------------------LPLLGQTLPALTVLDVSFNR 111
Query: 576 LSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARN 622
L+ + L L LYL GN+L P + L L+LA N
Sbjct: 112 LTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 70/159 (44%), Gaps = 4/159 (2%)
Query: 135 LMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVS 194
LMP R+ L+ +R + +L L + D+S NQ+ LP L L VS
Sbjct: 51 LMPYTRLTQLNLDRCELTKLQ-VDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVS 108
Query: 195 FNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDL 254
FN LT + L EL ELYL GN L+ P + L + LANN L LP L
Sbjct: 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQL-TELPAGL 167
Query: 255 CRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDN 293
L +L L L++ + IPK LL + L N
Sbjct: 168 LNGLENLDTLLLQE-NSLYTIPKGFFGSHLLPFAFLHGN 205
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 70/159 (44%), Gaps = 4/159 (2%)
Query: 135 LMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVS 194
LMP R+ L+ +R + +L L + D+S NQ+ LP L L VS
Sbjct: 51 LMPYTRLTQLNLDRCELTKLQ-VDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVS 108
Query: 195 FNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDL 254
FN LT + L EL ELYL GN L+ P + L + LANN L LP L
Sbjct: 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQL-TELPAGL 167
Query: 255 CRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDN 293
L +L L L++ + IPK LL + L N
Sbjct: 168 LNGLENLDTLLLQE-NSLYTIPKGFFGSHLLPFAFLHGN 205
Score = 30.4 bits (67), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 64/167 (38%), Gaps = 35/167 (20%)
Query: 459 GIPAEFGNLSNIIALS---LYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQL 515
+P + + I+ LS LY LA+ +P T NL +L+ + G++P
Sbjct: 24 ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPV----- 78
Query: 516 ESLNTLLLQGNALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLEYILVVDFSLNL 575
L TL L N LQ+ +P +L + V+D S N
Sbjct: 79 --LGTLDLSHNQLQS-------------------------LPLLGQTLPALTVLDVSFNR 111
Query: 576 LSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARN 622
L+ + L L LYL GN+L P + L L+LA N
Sbjct: 112 LTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 70/159 (44%), Gaps = 4/159 (2%)
Query: 135 LMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVS 194
LMP R+ L+ +R + +L L + D+S NQ+ LP L L VS
Sbjct: 51 LMPYTRLTQLNLDRCELTKLQ-VDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVS 108
Query: 195 FNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDL 254
FN LT + L EL ELYL GN L+ P + L + LANN L LP L
Sbjct: 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQL-TELPAGL 167
Query: 255 CRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDN 293
L +L L L++ + IPK LL + L N
Sbjct: 168 LNGLENLDTLLLQE-NSLYTIPKGFFGSHLLPFAFLHGN 205
Score = 30.4 bits (67), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 64/167 (38%), Gaps = 35/167 (20%)
Query: 459 GIPAEFGNLSNIIALS---LYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQL 515
+P + + I+ LS LY LA+ +P T NL +L+ + G++P
Sbjct: 24 ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPV----- 78
Query: 516 ESLNTLLLQGNALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLEYILVVDFSLNL 575
L TL L N LQ+ +P +L + V+D S N
Sbjct: 79 --LGTLDLSHNQLQS-------------------------LPLLGQTLPALTVLDVSFNR 111
Query: 576 LSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARN 622
L+ + L L LYL GN+L P + L L+LA N
Sbjct: 112 LTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 1343 LGTGIFSSVYKATFADGTNAAIKIFSLQE--DRALKSFDAECEVMRRIRHRNLAKIVSSC 1400
+G+G S V++ AIK +L+E ++ L S+ E + +++ + KI+
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIRLY 122
Query: 1401 SNPGFKALILQYMPQGSLE--KWLYSHNYLLNIEQRLDIMIDVACALEYLHQGYSTSIIH 1458
I M G+++ WL + E++ LE +H + I+H
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYW----KNMLEAVHTIHQHGIVH 178
Query: 1459 CDLKPSNVLLDDDMVAHLGDFGIA-KLLDGVDSMKQTMTLATIGYMAPE 1506
DLKP+N L+ D M+ L DFGIA ++ S+ + + T+ YM PE
Sbjct: 179 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSC 809
IG+G V++ AIK NL+ + + S+ E L +++ + KII
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIRLY 122
Query: 810 SNHGFKALILEYMPQGSLE--KWLYSHKYTLNIQQRLDIMIDVASALEYLH-HGHPTPVI 866
I M G+++ WL K +++ +R ++ A+ +H HG ++
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHG----IV 177
Query: 867 HCDLKPSNVLLDDDTVAHLSDFGISKLLDGE-DSVTQTMTLATFGYMAPE 915
H DLKP+N L+ D + L DFGI+ + + SV + + T YM PE
Sbjct: 178 HSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 71/159 (44%), Gaps = 4/159 (2%)
Query: 135 LMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVS 194
LMP R+ L+ +R + +L L + D+S NQ+ LP L L VS
Sbjct: 51 LMPYTRLTQLNLDRCELTKLQ-VDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVS 108
Query: 195 FNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDL 254
FN LT + L EL ELYL GN L+ P + L + LANN+L LP L
Sbjct: 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL-TELPAGL 167
Query: 255 CRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDN 293
L +L L L++ + IPK LL + L N
Sbjct: 168 LNGLENLDTLLLQE-NSLYTIPKGFFGSHLLPFAFLHGN 205
Score = 30.4 bits (67), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 64/169 (37%), Gaps = 35/169 (20%)
Query: 459 GIPAEFGNLSNIIALS---LYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQL 515
+P + + I+ LS LY LA+ +P T NL +L+ + G++P
Sbjct: 24 ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPV----- 78
Query: 516 ESLNTLLLQGNALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLEYILVVDFSLNL 575
L TL L N LQ+ +P +L + V+D S N
Sbjct: 79 --LGTLDLSHNQLQS-------------------------LPLLGQTLPALTVLDVSFNR 111
Query: 576 LSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGF 624
L+ + L L LYL GN+L P + L L+LA N
Sbjct: 112 LTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 70/159 (44%), Gaps = 4/159 (2%)
Query: 135 LMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVS 194
LMP R+ L+ +R + +L L + D+S NQ+ LP L L VS
Sbjct: 51 LMPYTRLTQLNLDRCELTKLQ-VDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVS 108
Query: 195 FNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDL 254
FN LT + L EL ELYL GN L+ P + L + LANN L LP L
Sbjct: 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNDL-TELPAGL 167
Query: 255 CRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDN 293
L +L L L++ + IPK LL + L N
Sbjct: 168 LNGLENLDTLLLQE-NSLYTIPKGFFGSHLLPFAFLHGN 205
Score = 30.4 bits (67), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 64/167 (38%), Gaps = 35/167 (20%)
Query: 459 GIPAEFGNLSNIIALS---LYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQL 515
+P + + I+ LS LY LA+ +P T NL +L+ + G++P
Sbjct: 24 ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPV----- 78
Query: 516 ESLNTLLLQGNALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLEYILVVDFSLNL 575
L TL L N LQ+ +P +L + V+D S N
Sbjct: 79 --LGTLDLSHNQLQS-------------------------LPLLGQTLPALTVLDVSFNR 111
Query: 576 LSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARN 622
L+ + L L LYL GN+L P + L L+LA N
Sbjct: 112 LTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 71/159 (44%), Gaps = 4/159 (2%)
Query: 135 LMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVS 194
LMP R+ L+ +R + +L L + D+S NQ+ LP L L VS
Sbjct: 51 LMPYTRLTQLNLDRAELTKLQ-VDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVS 108
Query: 195 FNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDL 254
FN LT + L EL ELYL GN L+ P + L + LANN+L LP L
Sbjct: 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL-TELPAGL 167
Query: 255 CRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDN 293
L +L L L++ + IPK LL + L N
Sbjct: 168 LNGLENLDTLLLQE-NSLYTIPKGFFGSHLLPFAFLHGN 205
Score = 30.8 bits (68), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 64/169 (37%), Gaps = 35/169 (20%)
Query: 459 GIPAEFGNLSNIIALS---LYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQL 515
+P + + I+ LS LY LA+ +P T NL +L+ + G++P
Sbjct: 24 ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPV----- 78
Query: 516 ESLNTLLLQGNALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLEYILVVDFSLNL 575
L TL L N LQ+ +P +L + V+D S N
Sbjct: 79 --LGTLDLSHNQLQS-------------------------LPLLGQTLPALTVLDVSFNR 111
Query: 576 LSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGF 624
L+ + L L LYL GN+L P + L L+LA N
Sbjct: 112 LTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With A Quinazolin Ligand Compound 4
Length = 342
Score = 44.7 bits (104), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIA-KLLDGVDSMKQTMTLATIGYM 1503
LE +H + I+H DLKP+N L+ D M+ L DFGIA ++ S+ + + T+ YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 1504 APE 1506
PE
Sbjct: 224 PPE 226
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 11/169 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSC 809
IG+G V++ AIK NL+ + + S+ E L +++ + KII
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIRLY 122
Query: 810 SNHGFKALILEYMPQGS--LEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
I M G+ L WL K +++ +R ++ LE +H H ++H
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNM---LEAVHTIHQHGIVH 178
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGE-DSVTQTMTLATFGYMAPE 915
DLKP+N L+ D + L DFGI+ + + SV + + T YM PE
Sbjct: 179 SDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 71/159 (44%), Gaps = 4/159 (2%)
Query: 135 LMPRLRIIDLSSNRISGNLFDDMCNSLTELESFDVSSNQITGQLPSSLGDCSKLKRLSVS 194
LMP R+ L+ +R + +L L + D+S NQ+ LP L L VS
Sbjct: 51 LMPYTRLTQLNLDRAELTKLQ-VDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVS 108
Query: 195 FNELTGRIPQNIGNLTELMELYLNGNNLQGEFPPTIFNVSSLRVIVLANNSLFGSLPVDL 254
FN LT + L EL ELYL GN L+ P + L + LANN+L LP L
Sbjct: 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL-TELPAGL 167
Query: 255 CRRLPSLQELNLRDCMTTGRIPKDIGNCTLLNYLGLRDN 293
L +L L L++ + IPK LL + L N
Sbjct: 168 LNGLENLDTLLLQE-NSLYTIPKGFFGSHLLPFAFLHGN 205
Score = 30.8 bits (68), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 64/169 (37%), Gaps = 35/169 (20%)
Query: 459 GIPAEFGNLSNIIALS---LYQNQLASTIPTTVGKLQNLQGLDLSYNNIQGSIPSELCQL 515
+P + + I+ LS LY LA+ +P T NL +L+ + G++P
Sbjct: 24 ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPV----- 78
Query: 516 ESLNTLLLQGNALQNQIPTCXXXXXXXXXXXXXXXXXXXXIPSTFWSLEYILVVDFSLNL 575
L TL L N LQ+ +P +L + V+D S N
Sbjct: 79 --LGTLDLSHNQLQS-------------------------LPLLGQTLPALTVLDVSFNR 111
Query: 576 LSGCLPQDIGNLKVLTGLYLSGNQLSCSIPSSIGGLKDLTYLALARNGF 624
L+ + L L LYL GN+L P + L L+LA N
Sbjct: 112 LTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 44.7 bits (104), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 1445 LEYLHQGYSTSIIHCDLKPSNVLLDDDMVAHLGDFGIA-KLLDGVDSMKQTMTLATIGYM 1503
LE +H + I+H DLKP+N L+ D M+ L DFGIA ++ S+ + + T+ YM
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 1504 APE 1506
PE
Sbjct: 176 PPE 178
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 11/169 (6%)
Query: 752 IGAGSFGSVYKATLPYGMNVAIKVFNLQL--DGAIKSFDAECEVLRRVRHRNLVKIISSC 809
IG+G V++ AIK NL+ + + S+ E L +++ + KII
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIRLY 74
Query: 810 SNHGFKALILEYMPQGS--LEKWLYSHKYTLNIQQRLDIMIDVASALEYLHHGHPTPVIH 867
I M G+ L WL K +++ +R ++ LE +H H ++H
Sbjct: 75 DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNM---LEAVHTIHQHGIVH 130
Query: 868 CDLKPSNVLLDDDTVAHLSDFGISKLLDGE-DSVTQTMTLATFGYMAPE 915
DLKP+N L+ D + L DFGI+ + + SV + + T YM PE
Sbjct: 131 SDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 178
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,731,285
Number of Sequences: 62578
Number of extensions: 1780367
Number of successful extensions: 9230
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 406
Number of HSP's that attempted gapping in prelim test: 3757
Number of HSP's gapped (non-prelim): 3137
length of query: 1624
length of database: 14,973,337
effective HSP length: 112
effective length of query: 1512
effective length of database: 7,964,601
effective search space: 12042476712
effective search space used: 12042476712
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)